Miyakogusa Predicted Gene

Lj1g3v3328690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328690.1 Non Chatacterized Hit- tr|I1KZL0|I1KZL0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.27,4e-19,
,CUFF.30422.1
         (106 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13340.1 | Symbols:  | Regulator of Vps4 activity in the MVB ...    58   1e-09

>AT1G13340.1 | Symbols:  | Regulator of Vps4 activity in the MVB
          pathway protein | chr1:4569622-4571043 REVERSE
          LENGTH=409
          Length = 409

 Score = 57.8 bits (138), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)

Query: 2  GLLGKSF-TSKFRSITTLAISRIAILMNQHKARASHARSDVAQFLNLGYQDRALLRV 57
           LLG+SF T+KF+S+ TLA++R++IL NQ +AR S A SDV + L LG  + A  RV
Sbjct: 7  ALLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAYHRV 63