Miyakogusa Predicted Gene

Lj1g3v3328680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328680.1 tr|F2EA50|F2EA50_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,46.91,3e-19,coiled-coil,NULL,CUFF.30418.1
         (182 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49210.2 | Symbols:  | unknown protein; Has 30201 Blast hits ...   185   2e-47
AT5G49210.1 | Symbols:  | unknown protein; Has 3675 Blast hits t...   185   2e-47

>AT5G49210.2 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr5:19950093-19951464 FORWARD LENGTH=195
          Length = 195

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/171 (54%), Positives = 131/171 (76%), Gaps = 2/171 (1%)

Query: 7   SSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQVKE 66
            SLRSF  +A + HH  H++ H FL P  ++GSWEAP DPK+AE KLAQLRRDYAK+V+ 
Sbjct: 22  GSLRSF--SADATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRV 79

Query: 67  LRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFRETL 126
            RKEYI E+E++R+EKQRKDEAR  A R A EER+ LKA+ A++RA++R I  ++FR+TL
Sbjct: 80  YRKEYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTL 139

Query: 127 LKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVI 177
           +KERAEKLE W+   +  EEK  E+ +LLR QSS+W+++ E+E++I + ++
Sbjct: 140 IKERAEKLEMWKMMGQKREEKIKEREKLLREQSSLWIEQKELERKITEALV 190


>AT5G49210.1 | Symbols:  | unknown protein; Has 3675 Blast hits to
           2315 proteins in 312 species: Archae - 2; Bacteria -
           342; Metazoa - 1190; Fungi - 281; Plants - 114; Viruses
           - 4; Other Eukaryotes - 1742 (source: NCBI BLink). |
           chr5:19950093-19951464 FORWARD LENGTH=195
          Length = 195

 Score =  185 bits (469), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 94/171 (54%), Positives = 131/171 (76%), Gaps = 2/171 (1%)

Query: 7   SSLRSFATTAKSAHHNNHRDNHKFLPPTSFLGSWEAPKDPKEAEAKLAQLRRDYAKQVKE 66
            SLRSF  +A + HH  H++ H FL P  ++GSWEAP DPK+AE KLAQLRRDYAK+V+ 
Sbjct: 22  GSLRSF--SADATHHRFHQETHNFLEPEYYIGSWEAPSDPKDAERKLAQLRRDYAKKVRV 79

Query: 67  LRKEYIEEMELMRLEKQRKDEARREALRVATEERKRLKAQEAEIRAQQRNIEQQQFRETL 126
            RKEYI E+E++R+EKQRKDEAR  A R A EER+ LKA+ A++RA++R I  ++FR+TL
Sbjct: 80  YRKEYIHEIEMLRVEKQRKDEARLLAERAANEERRLLKAEAAKVRAEERKIADEEFRQTL 139

Query: 127 LKERAEKLEYWRRKVKMHEEKKAEKNELLRRQSSMWVDEAEIEKQIFDTVI 177
           +KERAEKLE W+   +  EEK  E+ +LLR QSS+W+++ E+E++I + ++
Sbjct: 140 IKERAEKLEMWKMMGQKREEKIKEREKLLREQSSLWIEQKELERKITEALV 190