Miyakogusa Predicted Gene

Lj1g3v3328600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328600.1 Non Chatacterized Hit- tr|D7KMP0|D7KMP0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,69.35,0.000000000000001,coiled-coil,NULL,CUFF.30348.1
         (350 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22275.1 | Symbols: ZYP1b, ZYP1 | Myosin heavy chain-related ...   233   1e-61
AT1G22260.1 | Symbols: ZYP1a, ZYP1 | Myosin heavy chain-related ...   227   1e-59

>AT1G22275.1 | Symbols: ZYP1b, ZYP1 | Myosin heavy chain-related
           protein | chr1:7867245-7872066 FORWARD LENGTH=856
          Length = 856

 Score =  233 bits (595), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 223/336 (66%), Gaps = 1/336 (0%)

Query: 3   HLTSL-ETLEKEKSDLQLCNVQLTKKLDMSLQEIKNLERAHQVLTEHLLNLDKESLNLWS 61
           HL S+ E LEKEK+++QL + +L +KL  S QE+K L+     L   L  LDK++L    
Sbjct: 250 HLVSIQEKLEKEKTNVQLSSDELFEKLVRSEQEVKKLDELVHYLIAELTELDKKNLTFKE 309

Query: 62  KFDEMNSLYASCFELVQRERETFSKHAQNQYGELNHRFLSLSSEKDEIQMINHELRNSVN 121
           KFD+++ LY + F L++++R+  S  AQ  + +L      +++EK+ ++   +EL   + 
Sbjct: 310 KFDKLSGLYDTHFMLLRKDRDLASDRAQRSFDQLQGELFRVAAEKEALESSGNELSEKIV 369

Query: 122 ELQKVHNSTVVQHKEDCRLAAERIQHLESEAETLISKKAEADVIISKLEGKADTLLENSR 181
           ELQ    S + Q       A++ I  LE EA+ L+ K AE + +ISKL+ + DTLLE+ R
Sbjct: 370 ELQNDKESLISQLSGVRCSASQTIDKLEFEAKGLVLKNAETESVISKLKEEIDTLLESVR 429

Query: 182 SSENQMQGLLLKVSALENESKENMERLEAEILKKSEEIDTLQKEIIKLEQHADSVDKEVT 241
           +SE++ + L +K+S+LE ESK+  E+L+A+  ++  E++TLQKE    +  AD + KEV 
Sbjct: 430 TSEDKKKELSIKLSSLEIESKDKYEKLQADAQRQVGELETLQKESESHQLQADLLAKEVN 489

Query: 242 QLHNTLEEKEQCILQNMQQEKKLGDQLIENQSLLTAVESKLSEARKQYDQMVENKQLELS 301
           QL   +EEK   ILQ  + EK +  Q+I+++ LL   E+KL+EA+KQYD M+E+KQLELS
Sbjct: 490 QLQTIIEEKGHLILQCNENEKNINQQIIKDKELLATAETKLAEAKKQYDLMLESKQLELS 549

Query: 302 KHLKEISQRNDQAINDIRRKYELEKMEIANMEKDKV 337
           +HLKE+SQRNDQAIN+IRRKY++EK EI N EKDKV
Sbjct: 550 RHLKELSQRNDQAINEIRRKYDVEKHEIINSEKDKV 585


>AT1G22260.1 | Symbols: ZYP1a, ZYP1 | Myosin heavy chain-related
           protein | chr1:7860160-7865142 REVERSE LENGTH=871
          Length = 871

 Score =  227 bits (578), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 215/330 (65%)

Query: 8   ETLEKEKSDLQLCNVQLTKKLDMSLQEIKNLERAHQVLTEHLLNLDKESLNLWSKFDEMN 67
           E LEKEK+ +QL      +KL  S QE+K L+   Q L   L  LDK++L    KFD+++
Sbjct: 256 EKLEKEKTSVQLSADNCFEKLVSSEQEVKKLDELVQYLVAELTELDKKNLTFKEKFDKLS 315

Query: 68  SLYASCFELVQRERETFSKHAQNQYGELNHRFLSLSSEKDEIQMINHELRNSVNELQKVH 127
            LY +   L+Q++R+     AQ  +  L      +++ K+ ++   +EL   + ELQ   
Sbjct: 316 GLYDTHIMLLQKDRDLALDRAQRSFDNLQGELFRVAATKEALESAGNELNEKIVELQNDK 375

Query: 128 NSTVVQHKEDCRLAAERIQHLESEAETLISKKAEADVIISKLEGKADTLLENSRSSENQM 187
            S + Q        ++ I  LESEA+ L+SK A+A+  IS+L+ + +TLLE+ ++SE++ 
Sbjct: 376 ESLISQLSGLRCSTSQTIDKLESEAKGLVSKHADAESAISQLKEEMETLLESVKTSEDKK 435

Query: 188 QGLLLKVSALENESKENMERLEAEILKKSEEIDTLQKEIIKLEQHADSVDKEVTQLHNTL 247
           Q L LK+S+LE ESKE  E+L+A+  ++ EE++TLQKE    +  AD + KEV QL   +
Sbjct: 436 QELSLKLSSLEMESKEKCEKLQADAQRQVEELETLQKESESHQLQADLLAKEVNQLQTVI 495

Query: 248 EEKEQCILQNMQQEKKLGDQLIENQSLLTAVESKLSEARKQYDQMVENKQLELSKHLKEI 307
           EEK   ILQ  + EK+L  Q+I+++ LL   E+KL+EA+KQYD M+E+KQLELS+HLKE+
Sbjct: 496 EEKGHVILQCNENEKQLNQQIIKDKELLATAETKLAEAKKQYDLMLESKQLELSRHLKEL 555

Query: 308 SQRNDQAINDIRRKYELEKMEIANMEKDKV 337
           SQRNDQAIN+IRRKY++EK EI N EKDKV
Sbjct: 556 SQRNDQAINEIRRKYDVEKHEIINSEKDKV 585