Miyakogusa Predicted Gene
- Lj1g3v3313160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3313160.1 Non Chatacterized Hit- tr|I3SXB6|I3SXB6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.95,0,RIBOSOMAL_S7E,Ribosomal protein S7e; SUBFAMILY NOT
NAMED,NULL; 40S RIBOSOMAL PROTEIN S7,Ribosomal pr,CUFF.30318.1
(191 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16130.1 | Symbols: | Ribosomal protein S7e family protein |... 320 5e-88
AT3G02560.2 | Symbols: | Ribosomal protein S7e family protein |... 311 1e-85
AT3G02560.1 | Symbols: | Ribosomal protein S7e family protein |... 311 1e-85
AT1G48830.2 | Symbols: | Ribosomal protein S7e family protein |... 299 7e-82
AT1G48830.1 | Symbols: | Ribosomal protein S7e family protein |... 299 7e-82
>AT5G16130.1 | Symbols: | Ribosomal protein S7e family protein |
chr5:5268984-5269912 FORWARD LENGTH=190
Length = 190
Score = 320 bits (819), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 170/188 (90%)
Query: 1 MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
MF+++ KI KD AEPTE EE VAQ LFDLENTN E+KS+LKDLYINQA+ +D++GNRKA
Sbjct: 1 MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA 60
Query: 61 VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
VVIYVP+RLRK+FRKIHPRLVRELEKKFSGKDV+F+ TRRI+RPPKKGAAVQRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT 120
Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
+VH+AMLEDV +P+EIVGKR RYRLDGSKIMKVFLD KE+NN EYKLET VYRKLTGK
Sbjct: 121 SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPI 188
DVVFEYP+
Sbjct: 181 DVVFEYPV 188
>AT3G02560.2 | Symbols: | Ribosomal protein S7e family protein |
chr3:542341-543168 FORWARD LENGTH=191
Length = 191
Score = 311 bits (798), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/191 (76%), Positives = 169/191 (88%)
Query: 1 MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
M++ + KI KD PTEFEE V Q LFDLENTN E+KS+LKDLYINQA+Q+D++GNRKA
Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60
Query: 61 VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
VVIYVP+RLRK+FRKIH RLVRELEKKFSGKDV+F+ATRRI+RPPKKG+AVQRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
+VH+AMLEDV YP+EIVGKR RYRLDG+KIMKVFLD K +N+ EYKLET VYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFEYP+ EA
Sbjct: 181 DVVFEYPVIEA 191
>AT3G02560.1 | Symbols: | Ribosomal protein S7e family protein |
chr3:542341-543168 FORWARD LENGTH=191
Length = 191
Score = 311 bits (798), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/191 (76%), Positives = 169/191 (88%)
Query: 1 MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
M++ + KI KD PTEFEE V Q LFDLENTN E+KS+LKDLYINQA+Q+D++GNRKA
Sbjct: 1 MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA 60
Query: 61 VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
VVIYVP+RLRK+FRKIH RLVRELEKKFSGKDV+F+ATRRI+RPPKKG+AVQRPR RTLT
Sbjct: 61 VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT 120
Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
+VH+AMLEDV YP+EIVGKR RYRLDG+KIMKVFLD K +N+ EYKLET VYRKLTGK
Sbjct: 121 SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFEYP+ EA
Sbjct: 181 DVVFEYPVIEA 191
>AT1G48830.2 | Symbols: | Ribosomal protein S7e family protein |
chr1:18059854-18060935 REVERSE LENGTH=191
Length = 191
Score = 299 bits (766), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/191 (73%), Positives = 168/191 (87%)
Query: 1 MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
MF+++ KI K+ E +E +E VAQ FDLENTN E+KS+LKDLY+N A+QVD++G RKA
Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60
Query: 61 VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
+V+ VPYRLRK++RKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A +RPR RTLT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120
Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
+VH+A+L+DVV P+EIVGKR RYRLDG+KIMKVFLDPKERNN EYK+E FS VY+KLTGK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFE+PITEA
Sbjct: 181 DVVFEFPITEA 191
>AT1G48830.1 | Symbols: | Ribosomal protein S7e family protein |
chr1:18059854-18060935 REVERSE LENGTH=191
Length = 191
Score = 299 bits (766), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 140/191 (73%), Positives = 168/191 (87%)
Query: 1 MFTSRKKISKDNKAEPTEFEETVAQYLFDLENTNHEVKSDLKDLYINQAIQVDVAGNRKA 60
MF+++ KI K+ E +E +E VAQ FDLENTN E+KS+LKDLY+N A+QVD++G RKA
Sbjct: 1 MFSAQHKIHKEKGVELSELDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKA 60
Query: 61 VVIYVPYRLRKSFRKIHPRLVRELEKKFSGKDVVFIATRRIVRPPKKGAAVQRPRTRTLT 120
+V+ VPYRLRK++RKIH RLVRELEKKFSGKDV+ IATRRIVRPPKKG+A +RPR RTLT
Sbjct: 61 IVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLT 120
Query: 121 AVHDAMLEDVVYPSEIVGKRIRYRLDGSKIMKVFLDPKERNNAEYKLETFSKVYRKLTGK 180
+VH+A+L+DVV P+EIVGKR RYRLDG+KIMKVFLDPKERNN EYK+E FS VY+KLTGK
Sbjct: 121 SVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGK 180
Query: 181 DVVFEYPITEA 191
DVVFE+PITEA
Sbjct: 181 DVVFEFPITEA 191