Miyakogusa Predicted Gene

Lj1g3v3278880.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3278880.2 Non Chatacterized Hit- tr|F6HSQ4|F6HSQ4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.69,0,HEAT_REPEAT,HEAT, type 2; LISH,LisH dimerisation motif;
ARM repeat,Armadillo-type fold; Lissencephal,CUFF.30304.2
         (1093 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16210.1 | Symbols:  | HEAT repeat-containing protein | chr5:...  1343   0.0  

>AT5G16210.1 | Symbols:  | HEAT repeat-containing protein |
            chr5:5290999-5297779 REVERSE LENGTH=1180
          Length = 1180

 Score = 1343 bits (3475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1075 (64%), Positives = 826/1075 (76%), Gaps = 32/1075 (2%)

Query: 31   VADPQTXXXXXXXXXXXXXISDYELRLAQEDILKFKDELQKKTESLNEPNVARLSGDILV 90
            VADPQ+             IS+YE RLAQEDI + K E QKK+    + +    S +   
Sbjct: 67   VADPQSLLEEKEALAEKLAISEYEFRLAQEDIARLKTEGQKKSVPSIDKSEEMDSDEFGG 126

Query: 91   NEGQQIPLQKSTSFTDLGPLKDTERRDLNCAVKEYLLMAGYRLTAMTFYEEVTDQNLDIW 150
            N  +    +K  SFTD+GPLK+ ER+DLNCAVKEYLL+AGYRLTAMTFYEEVTDQNLD+W
Sbjct: 127  NRPEIQRKKKDFSFTDIGPLKNNERQDLNCAVKEYLLLAGYRLTAMTFYEEVTDQNLDVW 186

Query: 151  HNTPASVPDALRHYYYQYLSSTSEAAEEKFSLLRENETLLKANKVLNQEKEALLKNRDLA 210
             ++PA VPDALR+YYYQYLSSTSEAAEEK ++L+ENE+L K  + L++EK+ LLK+++  
Sbjct: 187  QDSPAHVPDALRYYYYQYLSSTSEAAEEKIAMLQENESLKKEIERLSKEKDGLLKSKENF 246

Query: 211  DAQIGALTKSLEAMHKDVKDKENLVQDLKQSLEHQRKVINDCRAEITSLKMHIEGSHLGK 270
            + QIGA  KS E++ KD++D+E  VQ LKQS EHQR+ +NDCRAEITSLKMHIEGS  G+
Sbjct: 247  EEQIGAFNKSTESLQKDLRDREKQVQSLKQSSEHQRRNLNDCRAEITSLKMHIEGSRAGQ 306

Query: 271  NLVVSDVNTVQSQSSEKYEEEIKKLQMEIELLKENNIRAPEPGNFVG-----SESENFQT 325
             + +++ + V+ QS E  EE+I  L  E+      N    + G  +      +E  + QT
Sbjct: 307  YVSLNEGDPVKLQSKE-VEEQISTLSEEV-----VNPTVEKDGGLISKVSISAEKGHIQT 360

Query: 326  -DDKVIE-----IHEDRAAISNPVDVKIGVEDNQDSQSPVVQTLNEHSDNHEHTLPELFX 379
             DD V+E     I + R       ++        ++Q  V   L   S+ +         
Sbjct: 361  EDDMVVEEVKNIIADQREVAGEAGNISYANNGTLENQKEVSNYLLSPSNGN--------- 411

Query: 380  XXXXXXXXXXXXXXXFENIKNDSELNVGEKAEDTELVKSDSGSGTIQILAEALPKIVPYV 439
                              I  DS  N      + E    + G GTIQILA+ALP IVPYV
Sbjct: 412  ---FSPRDLGSILKVDPGIGRDS--NSKSDNANGEAASEEMGLGTIQILADALPNIVPYV 466

Query: 440  LINHREELLPLIMCAIERHPDSSTRDSLTHTLFNLIKRPDEQQRQIIMDACVNLAKNVGE 499
            LINHREELLPL+MCAIERHP SSTRDSLTHTLFNLIKRPDEQQR+IIMDACV+L++NVGE
Sbjct: 467  LINHREELLPLMMCAIERHPVSSTRDSLTHTLFNLIKRPDEQQRRIIMDACVSLSRNVGE 526

Query: 500  MRTETELLPQCWEQISHMYEERRLLVAQSCGELAEFVRPEIRDSLILSIVQQLVEDSATI 559
            MRTETELLPQCWEQI+H YEERRLLVAQSCGELAE+VRPEIRDSLILSIVQQL+EDSAT+
Sbjct: 527  MRTETELLPQCWEQINHTYEERRLLVAQSCGELAEYVRPEIRDSLILSIVQQLIEDSATV 586

Query: 560  VREAAARNLAMLLPLFPNVDKYFKVEELMFQLACDPSGVVVETTLKELVPAVIKWGNKLD 619
            VREAAA NLA+LLPLFPN DKYFKVEE+MFQL CDPSG+VVETTLKEL+PAVIKWGN+LD
Sbjct: 587  VREAAAHNLALLLPLFPNTDKYFKVEEMMFQLICDPSGLVVETTLKELLPAVIKWGNRLD 646

Query: 620  HALRVLLSHVLSSAMRCPPLSGVEGSLESHLRVLGERERWNIDALLRMMVELLSLVHQKA 679
            H LR LLSH LSSA  CPPLSGVEGSLESHLRVLGERERWNID LLRM++ELL  +HQKA
Sbjct: 647  HILRGLLSHTLSSAQHCPPLSGVEGSLESHLRVLGERERWNIDVLLRMLMELLPAIHQKA 706

Query: 680  IETCPFSCTSESAQIVLSTPLLELYARGQVEWEAFEWMHVECFPSLIQLSCLLPQKEDNL 739
            + TCPFS  S+S +   S  LLE+YA G+ EW  FEWMHV+CF +L+QL+C+LPQKED+L
Sbjct: 707  MTTCPFSSISKSEESAFSVSLLEIYAEGRSEWPMFEWMHVDCFANLLQLACMLPQKEDHL 766

Query: 740  RSRISKFLLSVSESFGDSYVTCIMLPIFLIAVGDS-ADLTFFPTAIHSRIKGLRPRSAVA 798
            R+RI+KFLL+VSE FG SY+T I LP+FL+A GD  ADL F P+AIH RIKGL+PR+AVA
Sbjct: 767  RNRITKFLLAVSERFGSSYLTHIELPVFLVAAGDDEADLRFLPSAIHPRIKGLKPRTAVA 826

Query: 799  DRLSTMCVLPLLLAGVLSAPGKHEQLVEYLRKLLLEDKSMENRSTKHIPEIINAIRFICI 858
            +RL+T+C+LPLLLAGVL AP K E+L  +LR+LL+E K+ EN+S+KH  E+++A+RF+C 
Sbjct: 827  NRLATLCILPLLLAGVLGAPSKREELTIFLRQLLVESKTKENQSSKHNNEVLDAVRFLCT 886

Query: 859  YEQNHGMIFNILWEMVVSSNMTMKINAAQLLKVIVSYIDAKVASTHVLPALITLGSDQNL 918
            +E +H MIF ILWEMVV S   +KINAA+LLK IV YIDAKVAS +VLPALITLGSDQNL
Sbjct: 887  FEVHHNMIFGILWEMVVDSTAELKINAAKLLKTIVPYIDAKVASANVLPALITLGSDQNL 946

Query: 919  NVKYASIDAFGAVAQHFKNEMIVDKIRVQMDAFLEDGSHEATIAVIRALVIAVPHTIERL 978
            NVKYASIDAFG+VAQHFK +MIVDKI VQMDAF+EDGSHEA IAVIRAL++A+PHT ERL
Sbjct: 947  NVKYASIDAFGSVAQHFKVDMIVDKILVQMDAFMEDGSHEAIIAVIRALLVAIPHTTERL 1006

Query: 979  RDYLLSKIFQLTAMPNVTNDLMRRRERADAFCEAIRALDATDLPANSVRDFFLPAIQNLF 1038
            RDYLLSKI QL+A P+ + D+ RRRERA+AFCEAIRALDATDL   SV+++ LPAIQNL 
Sbjct: 1007 RDYLLSKILQLSASPSSSTDVNRRRERANAFCEAIRALDATDLSQTSVKEYLLPAIQNLL 1066

Query: 1039 KDMDALDPAHKEALEIILKERSGGTFDNISKVMGAHLGLPSSVSNLFGEGGLLGK 1093
            KD DALDPAHKEALEII+KERSGGTF+ ISK MGAHLG+ SSV++LFGEGGLLGK
Sbjct: 1067 KDPDALDPAHKEALEIIMKERSGGTFEAISKAMGAHLGIASSVTSLFGEGGLLGK 1121