Miyakogusa Predicted Gene
- Lj1g3v3244640.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3244640.2 tr|G7L416|G7L416_MEDTR Tubulin gamma chain
OS=Medicago truncatula GN=MTR_7g117050 PE=3 SV=1,98.6,0,Tubulin
C-terminal domain-like,Tubulin/FtsZ, C-terminal; Tubulin
nucleotide-binding domain-like,Tubu,CUFF.30272.2
(227 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin comp... 427 e-120
AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin | chr3:22812601-228... 425 e-119
AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:178594... 146 1e-35
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:111822... 145 2e-35
AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain | chr2:126442... 145 2e-35
AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044... 143 1e-34
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044... 143 1e-34
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:693803... 142 1e-34
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:251845... 142 2e-34
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:251815... 142 2e-34
AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962... 142 3e-34
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:284513... 141 3e-34
AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin | chr1:24050114-24... 114 6e-26
AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 | chr5:6687212-668... 112 2e-25
AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 | chr5:6682761-668... 112 2e-25
AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4... 111 3e-25
AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein | chr4... 111 4e-25
AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain | chr1:18517... 111 4e-25
AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain | chr1... 111 4e-25
>AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | gamma-tubulin complex
protein 2 | chr5:1679340-1681719 FORWARD LENGTH=474
Length = 474
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/215 (96%), Positives = 211/215 (98%)
Query: 9 AGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 68
+GMGSYLLE LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 69 NTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 128
NTALNRIAVERLHL+NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC
Sbjct: 207 NTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 266
Query: 129 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNII 188
HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQ KNIMVSSYAR K+ASQAKYISILNII
Sbjct: 267 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNII 326
Query: 189 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVC 223
QGEVDPTQVHESLQRIRERKLVNFI+WGPASIQV
Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVA 361
>AT3G61650.1 | Symbols: TUBG1 | gamma-tubulin |
chr3:22812601-22815011 REVERSE LENGTH=474
Length = 474
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/215 (96%), Positives = 210/215 (97%)
Query: 9 AGMGSYLLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 68
+GMGSYLLE LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD
Sbjct: 147 SGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLD 206
Query: 69 NTALNRIAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 128
NTAL RIAVERLHL+NPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC
Sbjct: 207 NTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRC 266
Query: 129 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNII 188
HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQ KNIMVSSYAR K+ASQAKYISILNII
Sbjct: 267 HFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNII 326
Query: 189 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVC 223
QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV
Sbjct: 327 QGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
>AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 |
chr5:17859442-17860994 REVERSE LENGTH=444
Length = 444
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + +V ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYSALSVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAVFRGKLST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + I+ + F+EW P +++ VC
Sbjct: 324 KEVDEQMMNIQNKNSSYFVEWIPNNVKSSVC 354
>AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain |
chr4:11182218-11183840 FORWARD LENGTH=444
Length = 444
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+NPTF N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + +V ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYSALSVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAVFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMMNVQNKNSSYFVEWIPNNVKSSVC 354
>AT2G29550.1 | Symbols: TUB7 | tubulin beta-7 chain |
chr2:12644258-12645932 REVERSE LENGTH=449
Length = 449
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMMTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LS P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRNLTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVC 354
>AT5G23860.2 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528
FORWARD LENGTH=449
Length = 449
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
>AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042962-8044528
FORWARD LENGTH=449
Length = 449
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
>AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain |
chr1:6938033-6940481 REVERSE LENGTH=449
Length = 449
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LS P+F N L+S MS T +LR+PG +N+DL L +LIP PR HF M G
Sbjct: 211 ICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 270
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT I TV ++ +++ +KN+M ++ D +Y++ I +G++
Sbjct: 271 FAPLTSRGSQQYI-SLTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAIFRGQMST 324
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + I+ + F+EW P +++ VC
Sbjct: 325 KEVDEQILNIQNKNSSYFVEWIPNNVKSSVC 355
>AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 |
chr5:25184501-25186426 FORWARD LENGTH=450
Length = 450
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRSLTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVC 354
>AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 |
chr5:25181560-25183501 FORWARD LENGTH=450
Length = 450
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRSLTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMLNVQNKNSSYFVEWIPNNVKSTVC 354
>AT5G12250.1 | Symbols: TUB6 | beta-6 tubulin | chr5:3961317-3962971
REVERSE LENGTH=449
Length = 449
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 151 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L L+ P+F N L+S MS T LR+PG +N+DL L +LIP PR HF M G
Sbjct: 210 ICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 269
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + R TV ++ +++ +KN+M ++ D +Y++ + +G++
Sbjct: 270 FAPLT-SRGSQQYRALTVPELTQQMWDSKNMMCAA-----DPRHGRYLTASAMFRGKMST 323
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 324 KEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 354
>AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain |
chr1:28451378-28453602 REVERSE LENGTH=447
Length = 447
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 123/211 (58%), Gaps = 9/211 (4%)
Query: 15 LLEALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNR 74
L+ + + Y +++ T+SVFP+ + SD VV+PYN+ L++ +L NAD +VLDN AL
Sbjct: 152 LISKIREEYPDRMMLTFSVFPSP-KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Query: 75 IAVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 134
I L LS P+F N L+S MS T +LR+PG +N+DL L +LIP PR HF M G
Sbjct: 211 ICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVG 270
Query: 135 YTPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDP 194
+ PLT R + TV ++ +++ AKN+M ++ D +Y++ + +G++
Sbjct: 271 FAPLT-SRGSQQYISLTVPELTQQMWDAKNMMCAA-----DPRHGRYLTASAMFRGKMST 324
Query: 195 TQVHESLQRIRERKLVNFIEWGPASIQ--VC 223
+V E + ++ + F+EW P +++ VC
Sbjct: 325 KEVDEQILNVQNKNSSYFVEWIPNNVKSSVC 355
>AT1G64740.1 | Symbols: TUA1 | alpha-1 tubulin |
chr1:24050114-24052296 FORWARD LENGTH=450
Length = 450
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 114/208 (54%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ + KK ++++P+ + S VV+PYNS+L+ L + D VV+LDN A+ I
Sbjct: 155 ERLSVDFGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDIC 213
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT++ N L+S +S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ +A + +V ++ + + N+M D KY++ + +G+V P
Sbjct: 274 PVISSAKA-YHEQFSVPEITTSVFEPSNMMAKC-----DPRHGKYMACCLMYRGDVVPKD 327
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 328 VNTAVAAIKAKRTIQFVDWCPTGFK-CG 354
>AT5G19780.1 | Symbols: TUA5 | tubulin alpha-5 |
chr5:6687212-6688926 FORWARD LENGTH=450
Length = 450
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK ++++P+ + S VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S ++S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ +A + +V ++ + + ++M D KY++ + +G+V P
Sbjct: 274 PVISAAKA-YHEQLSVPEITNAVFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPKD 327
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ V F++W P + CG
Sbjct: 328 VNAAVGTIKTKRTVQFVDWCPTGFK-CG 354
>AT5G19770.1 | Symbols: TUA3 | tubulin alpha-3 |
chr5:6682761-6684474 REVERSE LENGTH=450
Length = 450
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Query: 17 EALNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIA 76
E L+ Y KK ++++P+ + S VV+PYNS+L+ L + D V+LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTIYPSP-QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDIC 213
Query: 77 VERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYT 136
L + PT+ N L+S ++S+ TT+LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 214 RRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYA 273
Query: 137 PLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPTQ 196
P+ +A + +V ++ + + ++M D KY++ + +G+V P
Sbjct: 274 PVISAAKA-YHEQLSVPEITNAVFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPKD 327
Query: 197 VHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ V F++W P + CG
Sbjct: 328 VNAAVGTIKTKRTVQFVDWCPTGFK-CG 354
>AT4G14960.2 | Symbols: TUA6 | Tubulin/FtsZ family protein |
chr4:8548769-8550319 REVERSE LENGTH=450
Length = 450
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D ++LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L++ PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-FHEQLSVAEITNSAFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVGTIKTKRTIQFVDWCPTGFK-CG 354
>AT4G14960.1 | Symbols: TUA6 | Tubulin/FtsZ family protein |
chr4:8548753-8550319 REVERSE LENGTH=427
Length = 427
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 114/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D ++LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L++ PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-FHEQLSVAEITNSAFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVGTIKTKRTIQFVDWCPTGFK-CG 354
>AT1G50010.1 | Symbols: TUA2 | tubulin alpha-2 chain |
chr1:18517737-18519729 FORWARD LENGTH=450
Length = 450
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D ++LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-FHEQLSVAEITNSAFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVGTIKTKRTIQFVDWCPTGFK-CG 354
>AT1G04820.1 | Symbols: TUA4, TOR2 | tubulin alpha-4 chain |
chr1:1356421-1358266 REVERSE LENGTH=450
Length = 450
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 17 EALNDRYSKKLVQTYSVFPN-QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRI 75
E L+ Y KK ++V+P+ Q+ TS VV+PYNS+L+ L + D ++LDN A+ I
Sbjct: 155 ERLSVDYGKKSKLGFTVYPSPQVSTS--VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI 212
Query: 76 AVERLHLSNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGY 135
L + PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y
Sbjct: 213 CRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 272
Query: 136 TPLTVERQANVIRKTTVLDVMRRLLQAKNIMVSSYARTKDASQAKYISILNIIQGEVDPT 195
P+ +A + +V ++ + ++M D KY++ + +G+V P
Sbjct: 273 APVISAEKA-FHEQLSVAEITNSAFEPASMMAKC-----DPRHGKYMACCLMYRGDVVPK 326
Query: 196 QVHESLQRIRERKLVNFIEWGPASIQVCG 224
V+ ++ I+ ++ + F++W P + CG
Sbjct: 327 DVNAAVGTIKTKRTIQFVDWCPTGFK-CG 354