Miyakogusa Predicted Gene

Lj1g3v3244570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3244570.1 Non Chatacterized Hit- tr|I1JDM8|I1JDM8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46586
PE,77.43,0,eIF-5_eIF-2B,Translation initiation factor IF2/IF5; W2,W2
domain; no description,Translation initiat,CUFF.30332.1
         (442 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G36730.1 | Symbols:  | Translation initiation factor IF2/IF5 ...   498   e-141
AT1G77840.1 | Symbols:  | Translation initiation factor IF2/IF5 ...   496   e-140
AT5G20920.3 | Symbols: EIF2 BETA | eukaryotic translation initia...    60   3e-09
AT5G20920.1 | Symbols: EIF2 BETA, EMB1401 | eukaryotic translati...    60   3e-09
AT5G20920.2 | Symbols: EIF2 BETA | eukaryotic translation initia...    60   3e-09

>AT1G36730.1 | Symbols:  | Translation initiation factor IF2/IF5 |
           chr1:13898706-13900025 REVERSE LENGTH=439
          Length = 439

 Score =  498 bits (1281), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/452 (60%), Positives = 313/452 (69%), Gaps = 23/452 (5%)

Query: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA+N DDAFYRYKMPRM+TKIEGRGNGIKTNVVNMV+IAKAL RPAAYTTKYFG
Sbjct: 1   MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFG 60

Query: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKNQMIQ 120
           CELGAQSKFDEK GTS VNGAHDT+KLAGLLENFIKKYVQCYGCGNPETEILITK QM+Q
Sbjct: 61  CELGAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQ 120

Query: 121 LKCAACGFLSDVDMRDKLTTFIVKNPPENKKGSKDKKAMRRAEKERLKQGEAADXXXXXX 180
           LKCAACGFLSDVDMRDKLT+FI+KNPPE KK SKDKK+MRRAEKERL++GEAAD      
Sbjct: 121 LKCAACGFLSDVDMRDKLTSFILKNPPEQKKSSKDKKSMRRAEKERLREGEAADEEMRKL 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIXXXXXXXXXXX--XXVQWLADTSAEAAR 238
                                          +               VQW  DTS EAA 
Sbjct: 181 KKEAASKKKAATTGTSKDKVSKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAAE 240

Query: 239 QRIQEQLSAVTADMVMLSTNETEEKKKAGSKADNGSENGNKAHNGSENGNS----TNYTT 294
           +R++EQLSAVTA+MVMLST   EEKK         +E         ENGNS      +  
Sbjct: 241 KRMKEQLSAVTAEMVMLST--VEEKKPV-------AEVKKAPEQVHENGNSKIPENAHEK 291

Query: 295 LVGEVKAYLKKGVSAKELLSHLATISVSAQEKMSALFEALFDGIEKGFAKETIKRKSYLA 354
           LV E+K  L  G S  +L + LA+ S + QEKM ALF ALF G  KGFAKE IK+K YL 
Sbjct: 292 LVNEIKELLSSGSSPTQLKTALASNSANPQEKMDALFSALFGGTGKGFAKEVIKKKKYLL 351

Query: 355 A--AVAEEEG--SQLLLLHAIEEFSCKSASSALKEVALILKTLYDADVLDEDNIVQWYQK 410
           A   + EE G  +Q+ LL+ IE F  K+++ A KEVAL++K LYD D+LDED IV+WY K
Sbjct: 352 ALMMMQEEAGAPAQMGLLNGIESFCMKASAEAAKEVALVIKGLYDEDILDEDVIVEWYNK 411

Query: 411 GLKGDDKNSVIWKNVKPFIEWLQTAESETEEE 442
           G+    K+S + KNV PFIEWLQ AESE+EEE
Sbjct: 412 GV----KSSPVLKNVTPFIEWLQNAESESEEE 439


>AT1G77840.1 | Symbols:  | Translation initiation factor IF2/IF5 |
           chr1:29269087-29270400 FORWARD LENGTH=437
          Length = 437

 Score =  496 bits (1277), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 254/437 (58%), Positives = 308/437 (70%), Gaps = 10/437 (2%)

Query: 1   MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFG 60
           MALQNIGA+N +DAFYRYKMP+M+TK EG+GNGIKTN++N V+IAKALARP +YTTKYFG
Sbjct: 1   MALQNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFG 60

Query: 61  CELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKNQMIQ 120
           CELGAQSKFDEKTGTS VNGAH+T+KLAGLLENFIKK+VQCYGCGNPETEI+ITK QM+ 
Sbjct: 61  CELGAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCGNPETEIIITKTQMVN 120

Query: 121 LKCAACGFLSDVDMRDKLTTFIVKNPPENKKGSKDKKAMRRAEKERLKQGEAADXXXXXX 180
           LKCAACGF+S+VDMRDKLT FI+KNPPE KK SKDKKAMR+AEKERLK+GE AD      
Sbjct: 121 LKCAACGFISEVDMRDKLTNFILKNPPEQKKVSKDKKAMRKAEKERLKEGELADEEQRKL 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHIXXXXXXXXXXXXXVQWLADTSAEAARQR 240
                                                        V+W  DTS EAA +R
Sbjct: 181 KAKKKALSNGKDSKTSKNHSSDEDISPKHDENALEVDEDEDDDDGVEWQTDTSREAAEKR 240

Query: 241 IQEQLSAVTADMVMLSTNETEEKKKAGSKADNGSENGNKAHNGSENGNSTNYTTLVGEVK 300
           + EQLSA TA+MVMLS  E EEKK   SK+     NGN     +      N   LV ++K
Sbjct: 241 MMEQLSAKTAEMVMLSAMEVEEKKAPKSKS-----NGNVVKTENPPPQEKN---LVQDMK 292

Query: 301 AYLKKGVSAKELLSHLATISVSAQEKMSALFEALFDGIEKGFAKETIKRKSYLAAAVA-E 359
            YLKKG     L S ++++S   Q+ M ALF ALFDG+ KGFAKE  K+K+YLAAA   +
Sbjct: 293 EYLKKGSPISALKSFISSLSEPPQDIMDALFNALFDGVGKGFAKEVTKKKNYLAAAATMQ 352

Query: 360 EEGSQLLLLHAIEEFSCKSAS-SALKEVALILKTLYDADVLDEDNIVQWYQKGLKGDDKN 418
           E+GSQ+ LL++I  F  K+ +  ALKEVAL+LK LYD D+++E+ ++ WY+KGL G DK+
Sbjct: 353 EDGSQMHLLNSIGTFCGKNGNEEALKEVALVLKALYDQDIIEEEVVLDWYEKGLTGADKS 412

Query: 419 SVIWKNVKPFIEWLQTA 435
           S +WKNVKPF+EWLQ+A
Sbjct: 413 SPVWKNVKPFVEWLQSA 429


>AT5G20920.3 | Symbols: EIF2 BETA | eukaryotic translation
           initiation factor 2 beta subunit | chr5:7094994-7096661
           REVERSE LENGTH=268
          Length = 268

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K + R   +  +Y   ELG     D +     V G        G+L  +
Sbjct: 157 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 215

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I  YV C GC +P+T IL  +N++  L+C  CG
Sbjct: 216 ITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 247


>AT5G20920.1 | Symbols: EIF2 BETA, EMB1401 | eukaryotic translation
           initiation factor 2 beta subunit | chr5:7094994-7096661
           REVERSE LENGTH=268
          Length = 268

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K + R   +  +Y   ELG     D +     V G        G+L  +
Sbjct: 157 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 215

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I  YV C GC +P+T IL  +N++  L+C  CG
Sbjct: 216 ITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 247


>AT5G20920.2 | Symbols: EIF2 BETA | eukaryotic translation
           initiation factor 2 beta subunit | chr5:7094994-7096661
           REVERSE LENGTH=267
          Length = 267

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 35  KTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENF 94
           KT  VN +D+ K + R   +  +Y   ELG     D +     V G        G+L  +
Sbjct: 156 KTVFVNFMDLCKTMHRQPDHVMQYLLAELGTSGSLDGQQRLV-VKGRFAPKNFEGILRRY 214

Query: 95  IKKYVQCYGCGNPETEILITKNQMIQLKCAACG 127
           I  YV C GC +P+T IL  +N++  L+C  CG
Sbjct: 215 ITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 246