Miyakogusa Predicted Gene
- Lj1g3v3244510.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3244510.2 Non Chatacterized Hit- tr|G7KVA4|G7KVA4_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.2,0.000000000000005, ,CUFF.30254.2
(134 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38060.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 160 2e-40
AT5G38060.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 128 9e-31
AT1G65000.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 51 2e-07
>AT5G38060.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65000.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink). |
chr5:15189490-15189964 FORWARD LENGTH=134
Length = 134
Score = 160 bits (405), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/116 (67%), Positives = 91/116 (78%), Gaps = 7/116 (6%)
Query: 19 ALQSQRTPSSNTTYTSLLQFPSIRCCSTLNQKNSINLNTCKNCKTQFDPALNHPRACRFH 78
+L++ +TP N+ QF S C+ + L TCKNCKTQFDP LN+PRACRFH
Sbjct: 26 SLKTLKTPKLNSR-----QFFSQ--CTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFH 78
Query: 79 TAHYGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSEDPFDPGCTASPHSSYDD 134
TAH+GGETKRKFESVY GGTM+TP+SGKVLQYWHCCGSEDPFD GCTASPH++YDD
Sbjct: 79 TAHFGGETKRKFESVYTGGTMDTPNSGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 134
>AT5G38060.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr5:15189490-15189964
FORWARD LENGTH=122
Length = 122
Score = 128 bits (322), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 68/91 (74%), Gaps = 12/91 (13%)
Query: 44 CSTLNQKNSINLNTCKNCKTQFDPALNHPRACRFHTAHYGGETKRKFESVYEGGTMNTPD 103
C+ + L TCKNCKTQFDP LN+PRACRFHTAH+GG GTM+TP+
Sbjct: 44 CTASSSDGPKTLRTCKNCKTQFDPLLNNPRACRFHTAHFGG------------GTMDTPN 91
Query: 104 SGKVLQYWHCCGSEDPFDPGCTASPHSSYDD 134
SGKVLQYWHCCGSEDPFD GCTASPH++YDD
Sbjct: 92 SGKVLQYWHCCGSEDPFDSGCTASPHTTYDD 122
>AT1G65000.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G38060.1); Has 49 Blast hits to 49 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:24147156-24148373 FORWARD
LENGTH=83
Length = 83
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 58 CKNCKTQFDPALNHPRACRFHTAHYGGETKRKFESVYEGGTMNTPDSGKVLQYWHCCGSE 117
C+ CK + N +CRFH + + + YE + P + K ++ CCG+E
Sbjct: 10 CQRCKQSYTDLSNETSSCRFHPSFFVCRRHDDQKRYYELKPDDPPYAAK---FYDCCGAE 66
Query: 118 DPFDPGCTASPHSSYDD 134
DP PGC +PH SYDD
Sbjct: 67 DPNAPGCVTNPHISYDD 83