Miyakogusa Predicted Gene

Lj1g3v3219210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3219210.1 Non Chatacterized Hit- tr|B4FWV4|B4FWV4_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,33.95,2e-16,seg,NULL;
PROKAR_LIPOPROTEIN,NULL; coiled-coil,NULL,CUFF.30226.1
         (269 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G59350.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    78   7e-15
AT2G39560.1 | Symbols:  | Putative membrane lipoprotein | chr2:1...    55   5e-08

>AT5G59350.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 23 plant structures; EXPRESSED
           DURING: 13 growth stages; Has 1807 Blast hits to 1807
           proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:23941132-23941995 FORWARD LENGTH=287
          Length = 287

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 91/201 (45%), Gaps = 31/201 (15%)

Query: 49  VKELFNMFCWKRPSSSSLRQNGFTPRELCSSVRIGENLVYNPELQAQSQTNKGFLFKPFG 108
            KEL  +FC+K+P S  L+QN    RE    V + E+   + EL      N G L     
Sbjct: 58  AKELIQLFCFKKPQS--LQQNN-GGRE--GEVSMNEDGNPDLELGLMKHLNGGDL----- 107

Query: 109 EDGLEEEYMRQQGLFGPPRFLFPIIEESKEDLESQDSKSRGRSLGDLLV--------VET 160
             G E E M+        RFLF I+EE+K DLES+D                       T
Sbjct: 108 --GFEAELMKLHN----QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNT 161

Query: 161 PYLXXXXXXXXXXXXXXXXXXXXQHGFNPLFESATDAEFN---RMKSSPPPKFKFLQEAE 217
           P                       HGFNPLFES  + EFN   R  SSPPPKFKF+++AE
Sbjct: 162 PGFTPLASPKKSSSPLESYP---HHGFNPLFESDGELEFNKFFRSSSSPPPKFKFMRDAE 218

Query: 218 EKLRRKLQDNEGNGDEVSITV 238
           EKLR++L + E    E+SI  
Sbjct: 219 EKLRKRLIE-EAKRRELSIVT 238


>AT2G39560.1 | Symbols:  | Putative membrane lipoprotein |
           chr2:16505124-16505825 REVERSE LENGTH=233
          Length = 233

 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 100/237 (42%), Gaps = 50/237 (21%)

Query: 13  IVFGCXXXXXXXXXXXXXWWKKRIINR--EIENDYGSP-VKELFNMFCWKRPSSSSLRQN 69
           IVFGC             W KKR   R  +  NDY +P  +EL  +FC    ++ S    
Sbjct: 13  IVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFCCSSSTNPSSSSP 72

Query: 70  GFTPRELCSSVRIGENLVYNPELQAQSQTNKGFLFKPFGEDGLEEEYMRQQGLFGPPRFL 129
             +       +          + Q Q   N GF            E +   GL   PRFL
Sbjct: 73  SSSSFSNPKPI----------DTQQQCPLNNGF------------ENVGGPGLV--PRFL 108

Query: 130 FPIIEESKEDLESQDSKS-RGRSLGDLL------VVETPYLXXXXXXXXXXXXXXXXXXX 182
           F I+EE+ E++ES+D  S +G+SL DL       V+  PYL                   
Sbjct: 109 FTIMEETVEEMESEDVVSTKGKSLNDLFLNMESGVITPPYLTPRASPSLFTPPLTPLLME 168

Query: 183 XQHG----FNPLFESATDAEFNRM------------KSSPPPKFKFLQEAEEKLRRK 223
             +G     + LFES++DAEFNR+             SSP  +FKFL++AEEKL +K
Sbjct: 169 SCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRDAEEKLYKK 225