Miyakogusa Predicted Gene

Lj1g3v3219190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3219190.1 tr|Q4T9G9|Q4T9G9_TETNG Chromosome 12 SCAF7567,
whole genome shotgun sequence. (Fragment)
OS=Tetraodo,32.55,1e-18,Prenyltrans,Prenyltransferase/squalene
oxidase; no description,NULL; Terpenoid cyclases/Protein
pren,CUFF.30228.1
         (341 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | Prenyltransferase...   457   e-129
AT3G12070.2 | Symbols:  | RAB geranylgeranyl transferase beta su...   135   3e-32
AT3G12070.1 | Symbols: AtRGTB2, RGTB2 | RAB geranylgeranyl trans...   135   3e-32
AT5G12210.1 | Symbols: AtRGTB1, RGTB1 | RAB geranylgeranyl trans...   135   4e-32
AT5G12210.2 | Symbols:  | RAB geranylgeranyl transferase beta su...   134   6e-32
AT5G40280.1 | Symbols: ERA1, ATFTB, WIG | Prenyltransferase fami...   102   6e-22

>AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | Prenyltransferase
           family protein | chr2:16501666-16504144 FORWARD
           LENGTH=375
          Length = 375

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/340 (65%), Positives = 260/340 (76%)

Query: 2   NKDLHVTFLQMMYQLLPSPYESQEINHLTLAYFIISGLDILNALHSVEKEAVANWVLSFQ 61
            KD H+ +L+MMY+LLP  Y+SQEIN LTLA+FIISGL  L A   V+K+ VA WVLSFQ
Sbjct: 36  EKDRHLMYLEMMYELLPYHYQSQEINRLTLAHFIISGLHFLGARDRVDKDVVAKWVLSFQ 95

Query: 62  VHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYXXXXX 121
             P  +    +G+FYGF GSR+SQFP DENG L HN SHLAS+YCALAILK++G+     
Sbjct: 96  AFPTNRVSLKDGEFYGFFGSRSSQFPIDENGDLKHNGSHLASTYCALAILKVIGHDLSTI 155

Query: 122 XXXXXXXXXRNLQQPDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILL 181
                     NLQQ DGSFMPIH GGETDLRFVYCAA+IC+MLD+WSGMDKE AK+YIL 
Sbjct: 156 DSKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAAAICYMLDSWSGMDKESAKNYILN 215

Query: 182 CQSYDGGFGLVPGAESHGGATYCAVASLRLMGFIEDXXXXXXXXXXXXDVPLLLDWTLQR 241
           CQSYDGGFGL+PG+ESHGGATYCA+ASLRLMG+I              D  LLL+W LQR
Sbjct: 216 CQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSIIDPSLLLNWCLQR 275

Query: 242 QGTDGGFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQYKYGGFSKFPE 301
           Q  DGGFQGR NKPSDTCYAFWIGAVL+++GG   +DK A+R+FL++CQ KYGGFSKFP 
Sbjct: 276 QANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQSKYGGFSKFPG 335

Query: 302 EFPDLYHTYYGFSAFSLLEESGLKSLCSELGITDLAAIGV 341
           + PDLYH+YYG++AFSLLEE GL  LC ELG+  LAA G+
Sbjct: 336 QLPDLYHSYYGYTAFSLLEEQGLSPLCPELGLPLLAAPGI 375


>AT3G12070.2 | Symbols:  | RAB geranylgeranyl transferase beta
           subunit 2 | chr3:3845420-3847140 REVERSE LENGTH=317
          Length = 317

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 153/323 (47%), Gaps = 41/323 (12%)

Query: 9   FLQMMYQLLPSPYESQEINHLTL--AYFIISGLDILNALHSVEKEAVANWVLSFQVHPGT 66
            L +M +     +ES  ++HL +  AY+ ++ L +L+ L SV ++ V +WV++ Q   G 
Sbjct: 14  ILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESG- 72

Query: 67  KPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYXXXXXXXXXX 126
                     GF G+ T   P            H+  +  A+ IL +             
Sbjct: 73  ----------GFAGN-TGHDP------------HVLYTLSAVQILALFD-KLNILDVEKV 108

Query: 127 XXXXRNLQQPDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILLCQSYD 186
                 LQ  DGSF      GE D RF Y A     +L     ++ +KA DYI+ C++ D
Sbjct: 109 SNYIAGLQNEDGSFSG-DIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLD 167

Query: 187 GGFGLVPGAESHGGATYCAVASLRLMGFIEDXXXXXXXXXXXXDVPLLLDWTLQRQGTD- 245
           GGFG  PGAESH G  +C V +L + G +              D  LL  W  +RQ  + 
Sbjct: 168 GGFGCSPGAESHAGQIFCCVGALAITGNLH-----------RVDKDLLGWWLCERQDYES 216

Query: 246 GGFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQ-YKYGGFSKFPEEFP 304
           GG  GRP K  D CY++W+ + L ++   ++++K  + +F+L  Q    GG S  P    
Sbjct: 217 GGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGISDRPSYTV 276

Query: 305 DLYHTYYGFSAFSLLEESGLKSL 327
           D++HTY+G +  SLLE  G+K++
Sbjct: 277 DIFHTYFGVAGLSLLEYPGVKTI 299


>AT3G12070.1 | Symbols: AtRGTB2, RGTB2 | RAB geranylgeranyl
           transferase beta subunit 2 | chr3:3845420-3847140
           REVERSE LENGTH=317
          Length = 317

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 153/323 (47%), Gaps = 41/323 (12%)

Query: 9   FLQMMYQLLPSPYESQEINHLTL--AYFIISGLDILNALHSVEKEAVANWVLSFQVHPGT 66
            L +M +     +ES  ++HL +  AY+ ++ L +L+ L SV ++ V +WV++ Q   G 
Sbjct: 14  ILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESG- 72

Query: 67  KPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYXXXXXXXXXX 126
                     GF G+ T   P            H+  +  A+ IL +             
Sbjct: 73  ----------GFAGN-TGHDP------------HVLYTLSAVQILALFD-KLNILDVEKV 108

Query: 127 XXXXRNLQQPDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILLCQSYD 186
                 LQ  DGSF      GE D RF Y A     +L     ++ +KA DYI+ C++ D
Sbjct: 109 SNYIAGLQNEDGSFSG-DIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLD 167

Query: 187 GGFGLVPGAESHGGATYCAVASLRLMGFIEDXXXXXXXXXXXXDVPLLLDWTLQRQGTD- 245
           GGFG  PGAESH G  +C V +L + G +              D  LL  W  +RQ  + 
Sbjct: 168 GGFGCSPGAESHAGQIFCCVGALAITGNLH-----------RVDKDLLGWWLCERQDYES 216

Query: 246 GGFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQ-YKYGGFSKFPEEFP 304
           GG  GRP K  D CY++W+ + L ++   ++++K  + +F+L  Q    GG S  P    
Sbjct: 217 GGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGISDRPSYTV 276

Query: 305 DLYHTYYGFSAFSLLEESGLKSL 327
           D++HTY+G +  SLLE  G+K++
Sbjct: 277 DIFHTYFGVAGLSLLEYPGVKTI 299


>AT5G12210.1 | Symbols: AtRGTB1, RGTB1 | RAB geranylgeranyl
           transferase beta subunit 1 | chr5:3947254-3949595
           FORWARD LENGTH=321
          Length = 321

 Score =  135 bits (340), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 158/327 (48%), Gaps = 41/327 (12%)

Query: 4   DLHVTFLQMMYQLLPSPYESQEINHLTL--AYFIISGLDILNALHSVEKEAVANWVLSFQ 61
           D HV ++ +M +     +ES  ++HL +  AY+ ++ LD+L+ L  V +E V +W+++ Q
Sbjct: 15  DKHVRYI-LMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQ 73

Query: 62  VHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYXXXXX 121
              G           GF G+ T   P            H+  +  A+ IL +        
Sbjct: 74  HESG-----------GFAGN-TGHDP------------HILYTLSAVQILALFDKINILD 109

Query: 122 XXXXXXXXXRNLQQPDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILL 181
                    + LQ  DGSF      GE D RF Y A     +L     ++ EKA  YI+ 
Sbjct: 110 IGKVSSYVAK-LQNEDGSFSG-DMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVS 167

Query: 182 CQSYDGGFGLVPGAESHGGATYCAVASLRLMGFIEDXXXXXXXXXXXXDVPLLLDWTLQR 241
           C++ DGGFG  PGAESH G  +C V +L + G +              D   L  W  +R
Sbjct: 168 CKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLH-----------HVDKDSLGWWLCER 216

Query: 242 QGTDGGFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQ-YKYGGFSKFP 300
           Q   GG  GRP K +D CY++W+ + L ++   +++DK  + +F+L CQ    GG S  P
Sbjct: 217 QLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRP 276

Query: 301 EEFPDLYHTYYGFSAFSLLEESGLKSL 327
           E+  D++HTY+G +  SLLE  G+K +
Sbjct: 277 EDAVDIFHTYFGVAGLSLLEYPGVKVI 303


>AT5G12210.2 | Symbols:  | RAB geranylgeranyl transferase beta
           subunit 1 | chr5:3947254-3949595 FORWARD LENGTH=320
          Length = 320

 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 42/327 (12%)

Query: 4   DLHVTFLQMMYQLLPSPYESQEINHLTL--AYFIISGLDILNALHSVEKEAVANWVLSFQ 61
           D HV ++ M  +     +ES  ++HL +  AY+ ++ LD+L+ L  V +E V +W+++ Q
Sbjct: 15  DKHVRYILMAEK--KESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQ 72

Query: 62  VHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYXXXXX 121
              G           GF G+ T   P            H+  +  A+ IL +        
Sbjct: 73  HESG-----------GFAGN-TGHDP------------HILYTLSAVQILALFDKINILD 108

Query: 122 XXXXXXXXXRNLQQPDGSFMPIHTGGETDLRFVYCAASICFMLDNWSGMDKEKAKDYILL 181
                    + LQ  DGSF      GE D RF Y A     +L     ++ EKA  YI+ 
Sbjct: 109 IGKVSSYVAK-LQNEDGSFSG-DMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVS 166

Query: 182 CQSYDGGFGLVPGAESHGGATYCAVASLRLMGFIEDXXXXXXXXXXXXDVPLLLDWTLQR 241
           C++ DGGFG  PGAESH G  +C V +L + G +              D   L  W  +R
Sbjct: 167 CKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLH-----------HVDKDSLGWWLCER 215

Query: 242 QGTDGGFQGRPNKPSDTCYAFWIGAVLRILGGCNFVDKNAVREFLLACQ-YKYGGFSKFP 300
           Q   GG  GRP K +D CY++W+ + L ++   +++DK  + +F+L CQ    GG S  P
Sbjct: 216 QLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGISDRP 275

Query: 301 EEFPDLYHTYYGFSAFSLLEESGLKSL 327
           E+  D++HTY+G +  SLLE  G+K +
Sbjct: 276 EDAVDIFHTYFGVAGLSLLEYPGVKVI 302


>AT5G40280.1 | Symbols: ERA1, ATFTB, WIG | Prenyltransferase family
           protein | chr5:16101391-16104783 FORWARD LENGTH=482
          Length = 482

 Score =  102 bits (253), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 14/169 (8%)

Query: 100 HLASSYCALAILKIVG--YXXXXXXXXXXXXXXRNLQQPDGSFMPIHTGGETDLRFVYCA 157
           HLA++Y A+  L  +G                 R ++   G F  +H  GE D+R  Y A
Sbjct: 157 HLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGF-RMHDMGEMDVRACYTA 215

Query: 158 ASICFMLDNWSGMDKEKAKDYILLCQSYDGGFGLVPGAESHGGATYCAVASLRLMGFIED 217
            S+  +L+       +   DYIL CQ+Y+GG G  PG+E+HGG TYC +A++ L+  ++ 
Sbjct: 216 ISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVD- 274

Query: 218 XXXXXXXXXXXXDVPLLLDWTLQRQGTDGGFQGRPNKPSDTCYAFWIGA 266
                       ++  L++W + RQG + GFQGR NK  D CY FW  A
Sbjct: 275 ----------RLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAA 313