Miyakogusa Predicted Gene
- Lj1g3v3217860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3217860.1 Non Chatacterized Hit- tr|I1N537|I1N537_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.7,0,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; DYW_deaminase,NULL; no description,Tet,CUFF.30194.1
(727 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 916 0.0
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 571 e-163
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 552 e-157
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 546 e-155
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 540 e-153
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 536 e-152
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 531 e-151
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 521 e-148
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 506 e-143
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 503 e-142
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 499 e-141
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 486 e-137
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 486 e-137
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 485 e-137
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 484 e-137
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 475 e-134
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 475 e-134
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 474 e-133
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 469 e-132
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 469 e-132
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 464 e-130
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 463 e-130
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 460 e-129
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 459 e-129
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 453 e-127
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 453 e-127
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 452 e-127
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 451 e-126
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 449 e-126
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 448 e-126
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 448 e-126
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 447 e-125
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 446 e-125
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-124
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 444 e-124
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 444 e-124
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 442 e-124
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 439 e-123
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 438 e-123
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 437 e-122
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-122
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 432 e-121
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 423 e-118
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 418 e-117
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 416 e-116
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 405 e-113
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 398 e-111
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 396 e-110
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 394 e-110
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 391 e-109
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 389 e-108
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 385 e-107
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 380 e-105
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 378 e-105
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 377 e-104
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 371 e-102
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 369 e-102
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 8e-99
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 357 2e-98
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 355 4e-98
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 347 2e-95
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 345 9e-95
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 344 1e-94
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 8e-93
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 338 9e-93
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 3e-92
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 333 2e-91
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 5e-91
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 5e-91
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 1e-90
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 8e-90
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 1e-89
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 327 2e-89
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 323 3e-88
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 5e-88
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 7e-88
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 3e-86
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 315 8e-86
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 315 8e-86
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 5e-85
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 1e-84
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 7e-84
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 306 3e-83
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 5e-83
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 2e-82
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 296 4e-80
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 7e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 5e-78
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 287 2e-77
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 2e-76
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 5e-75
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 279 5e-75
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 7e-75
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 273 4e-73
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 272 5e-73
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 266 4e-71
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 256 4e-68
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 243 4e-64
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 2e-61
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 228 1e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 3e-59
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 3e-53
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 7e-48
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 9e-45
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 3e-44
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 2e-32
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 7e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 114 4e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 4e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 109 7e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 8e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 109 9e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 7e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 105 1e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 1e-22
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 2e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 2e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 104 3e-22
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 101 2e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 99 9e-21
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 6e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 9e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 93 7e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 93 8e-19
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 7e-18
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 8e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-17
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 3e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 83 6e-16
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 81 3e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 7e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 76 7e-14
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 5e-13
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 2e-12
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 2e-12
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 2e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 69 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 68 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 8e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 2e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 65 2e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 1e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 60 5e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 9e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 8e-06
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/680 (62%), Positives = 546/680 (80%), Gaps = 2/680 (0%)
Query: 50 DHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK 109
+ G++ DSFYASLID++THK L QIH +L+V GL+ +GFLITKL++ SS+ G I +AR+
Sbjct: 15 NSGIHSDSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQ 74
Query: 110 LFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD 169
+FD+ P +F WNAIIRGYSR+N F++ + MY M+ V PD FTFP++LKAC+ L
Sbjct: 75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH 134
Query: 170 FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN--DRTVVSWTSII 227
++ VH QV R GF DVFVQNGL+A+YAKC +G AR VF+GL +RT+VSWT+I+
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
S YAQNGE +EAL +F+QMR DVK DW+ALVS++ A+ + DL+QGRS+H ++KMG E
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
EPDLLISL YAKCGQV A+ FD+MK+ ++I+WNAMISGYAKNG+A EA+D+F EM
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEM 314
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV 407
I ++++PD++++ SA A AQVGSL+ A+ M +YV +S+Y D+F+++ALIDM+AKCG+V
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 408 ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
E AR+VFDRT ++DV++WSAMI+GYGLHG+ EAI+LY AM + GV PNDVTF+GLL AC
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 468 NHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVW 527
NHSG+VREGW F+ M I P+ +HY+CV+DLLGRAG+LDQAY+ I M ++PGV+VW
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 528 GALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREK 587
GALLSACK HRHV LGEYAA++LFS+DP NTGHYVQLSNLYA++RLWD VA VRV M+EK
Sbjct: 495 GALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
Query: 588 GLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDL 647
GL+KD+G S +E+ G+L+ F VGDKSHPR +EI +++ +E RLKE GFV + ++ LHDL
Sbjct: 555 GLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDL 614
Query: 648 NYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIV 707
N EE EE L HSERIA+AYGLIST GT LRITKNLRACVNCH+ KLISKLV+REI+V
Sbjct: 615 NDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVV 674
Query: 708 RDANRFHHFKDGLCSCGDYW 727
RD NRFHHFKDG+CSCGDYW
Sbjct: 675 RDTNRFHHFKDGVCSCGDYW 694
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 571 bits (1472), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/655 (42%), Positives = 409/655 (62%), Gaps = 5/655 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH Q +V G L + +V + ARK+FD D LWN +I GY ++ +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 135 FRNTIEMY-GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ +I+++ L+ D T +L A EL + RL +H + G +V
Sbjct: 201 YVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLT 260
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
G +++Y+KCG I M +F +V++ ++I GY NGE +L LF ++ + +L
Sbjct: 261 GFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARL 320
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
LVS+V G L ++HG +K F + +LT Y+K ++ AR F
Sbjct: 321 RSSTLVSLVPVSGH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
D+ S+ WNAMISGY +NG E+A+ LFREM P+ VT+ A AQ+G+L
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
L +W+ D V +++ S I+V+TALI MYAKCG++ AR +FD ++K+ + W+ MI GYG
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRN 492
LHGQG EA+N+++ M +G+ P VTF+ +L AC+H+GLV+EG E+F+ M +G EP
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
+HY+C+VD+LGRAG+L +A FI MSIEPG SVW LL AC+IH+ L ++KLF
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE 617
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK 612
LDP N G++V LSN++++ R + A VR +++ L+K GY++IEI VF GD+
Sbjct: 618 LDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQ 677
Query: 613 SHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIST 672
SHP+ EIY ++++LE +++E G+ P TE LHD+ EE+E + +HSER+A+A+GLI+T
Sbjct: 678 SHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIAT 737
Query: 673 APGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
PGT +RI KNLR C++CH+V KLISK+ ER I+VRDANRFHHFKDG+CSCGDYW
Sbjct: 738 EPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 250/481 (51%), Gaps = 6/481 (1%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPD 118
Y ST HL Q H Q+I+ G +++ L+TKL S+LG I YAR +F PD
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPD 82
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVH 177
VFL+N ++RG+S + +++ ++ +R+ + P+ T+ + + A + D R ++H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL 237
GQ + G ++ + + +V MY K + AR VFD + ++ + W ++ISGY +N +
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 238 EALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
E++++F + N +LD L+ I+ A ++ +L G +H K G +L
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
+ Y+KCG++ + + F + + ++ +NAMI GY NG E ++ LF+E++ + S
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ S S G L L + Y KS + S V+TAL +Y+K +ESAR +FD
Sbjct: 323 STLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
+ EK + W+AMI GY +G +AI+L+ M+++ PN VT +L+AC G + G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 477 WELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
+ +R E + ++ + + G + +A M+ + V+ W ++S +
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT-WNTMISGYGL 498
Query: 537 H 537
H
Sbjct: 499 H 499
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 57 SFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH 116
S SL+ S H + IH + S + + T L S L I ARKLFDE
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
+ WNA+I GY+++ L + I ++ M++ P+ T +L AC +L L V
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
H V F ++V L+ MYAKCG+I AR +FD + + V+W ++ISGY +G+
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII-KMGFEDEPDLLIS 295
EAL +F +M N+ + + + ++ A +++G + +I + GFE
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYAC 562
Query: 296 LTAFYAKCGQVIVARSFFDQM 316
+ + G + A F + M
Sbjct: 563 MVDILGRAGHLQRALQFIEAM 583
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/629 (43%), Positives = 407/629 (64%), Gaps = 11/629 (1%)
Query: 110 LFDEF-SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL 168
LF+ + DVF WN++I +RS + + MR+ + P +FP +KAC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 169 DFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIIS 228
D H Q +G+ D+FV + L+ MY+ CG + AR VFD + R +VSWTS+I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 229 GYAQNGEALEALRLFNQM---RNTD---VKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
GY NG AL+A+ LF + N D + LD + LVS++ A V S+H +I
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 283 KMGFEDEPDLLISLTAFYAKCGQ--VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
K GF+ + +L YAK G+ V VAR FDQ+ + +N+++S YA++G + EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 341 VDLFREMITRNIKP-DSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
++FR ++ + +++T+ + LA + G+L++ + + D V + D+ V T++ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
MY KCG VE+AR FDR K+V W+AMI GYG+HG +A+ L+ AM +GV PN +T
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 460 FIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
F+ +L AC+H+GL EGW F+ M+G FG+EP EHY C+VDLLGRAG+L +AYD I +M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 519 SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVA 578
++P +W +LL+AC+IH++V L E + +LF LD N G+Y+ LS++YA + W V
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 579 HVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVP 638
VR++M+ +GL K G+S++E+NG++ VF +GD+ HP+ ++IY + L R+L E G+V
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 639 HTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLIS 698
+T SV HD++ EEKE L +HSE++A+A+G+++T PG+ + + KNLR C +CH+VIKLIS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 699 KLVEREIIVRDANRFHHFKDGLCSCGDYW 727
K+V+RE +VRDA RFHHFKDG CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 193/377 (51%), Gaps = 19/377 (5%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q H Q V G + + F+ + L+ S G + ARK+FDE ++ W ++IRGY +
Sbjct: 97 QTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGY---D 153
Query: 134 LFRNTIEMYGLMRREGVDP---------DGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
L N ++ L + VD D V+ AC+ + L+ +H VI+ G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 185 FGPDVFVQNGLVAMYAKCGN--IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRL 242
F V V N L+ YAK G + +AR +FD + D+ VS+ SI+S YAQ+G + EA +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 243 FNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
F ++ +N V + I L +++ A L G+ +H +I+MG ED+ + S+ Y
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
KCG+V AR FD+MK +V W AMI+GY +GHA +A++LF MI ++P+ +T S
Sbjct: 334 KCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVS 393
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESARIVFDRTSE 419
A + G L + W K + + + ++D+ + G ++ A + R
Sbjct: 394 VLAACSHAG-LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 420 K-DVIMWSAMIMGYGLH 435
K D I+WS+++ +H
Sbjct: 453 KPDSIIWSSLLAACRIH 469
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 270/655 (41%), Positives = 413/655 (63%), Gaps = 2/655 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+IH L+ SG + F +T L N + + ARK+FD D+ WN I+ GYS++
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ R +EM M E + P T VL A + L + +HG +R GF V +
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MYAKCG++ AR +FDG+ +R VVSW S+I Y QN EA+ +F +M + VK
Sbjct: 276 ALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKP 335
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
++++ + A D+ DLE+GR +H +++G + ++ SL + Y KC +V A S F
Sbjct: 336 TDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF 395
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
++++ +++ WNAMI G+A+NG +A++ F +M +R +KPD+ T S A A++
Sbjct: 396 GKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
A+W+ V +S ++FV TAL+DMYAKCG + AR++FD SE+ V W+AMI GYG
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRN 492
HG G A+ L+ M++ + PN VTF+ +++AC+HSGLV G + F+ M+ + IE
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
+HY +VDLLGRAG L++A+DFIM+M ++P V+V+GA+L AC+IH++V E AA++LF
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK 612
L+P + G++V L+N+Y ++ +W+ V VRV M +GL K G S++EI ++ F G
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGST 695
Query: 613 SHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIST 672
+HP S +IY +++L +KE G+VP T VL N + KE+ L+ HSE++A+++GL++T
Sbjct: 696 AHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVEN-DVKEQLLSTHSEKLAISFGLLNT 754
Query: 673 APGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
GT + + KNLR C +CH+ K IS + REI+VRD RFHHFK+G CSCGDYW
Sbjct: 755 TAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 252/478 (52%), Gaps = 1/478 (0%)
Query: 60 ASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDV 119
A L++ + + L QI + +GL F TKLV+ G + A ++F+
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQ 179
L++ +++G+++ + ++ + MR + V+P + F Y+LK C + + R+ +HG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+++ GF D+F GL MYAKC + AR VFD + +R +VSW +I++GY+QNG A A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
L + M ++K +I +VS++ A + + G+ +HG ++ GF+ ++ +L
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
YAKCG + AR FD M +V+ WN+MI Y +N + +EA+ +F++M+ +KP V+V
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
A A A +G L+ +++ + ++ V +LI MY KC V++A +F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+ ++ W+AMI+G+ +G+ +A+N + MR V P+ T++ ++TA + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
+ ++ + +VD+ + G + A I M E V+ W A++ H
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 196/411 (47%), Gaps = 29/411 (7%)
Query: 28 FLKFIKHLCSSSVLNLGHVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHN 87
F+ + L + S L L V HG + S + SL++ S
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS--------------------- 274
Query: 88 GFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRR 147
T LV+ + G + AR+LFD +V WN++I Y ++ + + ++ M
Sbjct: 275 ----TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD 330
Query: 148 EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM 207
EGV P + L AC +L D +H + G +V V N L++MY KC +
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
A +F L RT+VSW ++I G+AQNG ++AL F+QMR+ VK D VS++ A +
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
+ + +HG +++ + + +L YAKCG +++AR FD M V WNAM
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
I GY +G + A++LF EM IKP+ VT S A + G ++ A Y+ K Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVE-AGLKCFYMMKENY 569
Query: 388 ASDIFVN--TALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLH 435
+ ++ ++ A++D+ + G + A + + V ++ AM+ +H
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/708 (39%), Positives = 420/708 (59%), Gaps = 43/708 (6%)
Query: 61 SLIDNSTH---KRHLDQIHNQLI-VSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH 116
+LI N T K Q+H Q I L H I +++ +NL + A LF
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKS 67
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P V W ++IR ++ +LF + + MR G PD FP VLK+CT ++D R V
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAK---------CGN----------------------- 204
HG ++R G D++ N L+ MYAK GN
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 205 ----IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVS 260
I R VF+ + + VVS+ +II+GYAQ+G +ALR+ +M TD+K D L S
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
++ + + D+ +G+ +HG +I+ G + + + SL YAK ++ + F ++
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDD 380
I WN++++GY +NG EA+ LFR+M+T +KP +V S A A + +L L + +
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
YV + + S+IF+ +AL+DMY+KCGN+++AR +FDR + D + W+A+IMG+ LHG G E
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVV 499
A++L+ M++ GV PN V F+ +LTAC+H GLV E W F+ M + +G+ EHY+ V
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 500 DLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTG 559
DLLGRAG L++AY+FI KM +EP SVW LLS+C +H+++ L E A+K+F++D N G
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMG 547
Query: 560 HYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDE 619
YV + N+YAS+ W +A +R+ MR+KGL K S IE+ K F GD+SHP D+
Sbjct: 548 AYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDK 607
Query: 620 IYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILR 679
I ++ + ++++ G+V T VLHD++ E K E L HSER+AVA+G+I+T PGT +R
Sbjct: 608 INEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIR 667
Query: 680 ITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+TKN+R C +CH IK ISK+ EREIIVRD +RFHHF G CSCGDYW
Sbjct: 668 VTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/711 (39%), Positives = 414/711 (58%), Gaps = 37/711 (5%)
Query: 54 NLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKL--VNGSSNLGHICYARKLF 111
N S + SLI+ R L Q H +I +G + + +KL + S+ + YARK+F
Sbjct: 28 NERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 112 DEFSHPDVFLWNAIIRGY-SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDF 170
DE P+ F WN +IR Y S + + ++ P+ +TFP+++KA E+
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGY 230
L +HG ++ G DVFV N L+ Y CG++ A VF + ++ VVSW S+I+G+
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 231 AQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
Q G +AL LF +M + DVK + +V ++ A + +LE GR + I +
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMK-------------------------------TS 319
L ++ Y KCG + A+ FD M+
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRSAALASAQVGSLKLAQWM 378
++ WNA+IS Y +NG EA+ +F E+ + +N+K + +T+ S A AQVG+L+L +W+
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWI 387
Query: 379 DDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
Y+ K + V +ALI MY+KCG++E +R VF+ ++DV +WSAMI G +HG G
Sbjct: 388 HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCG 447
Query: 439 WEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSC 497
EA+++++ M++A V PN VTF + AC+H+GLV E LFH M +GI P +HY+C
Sbjct: 448 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 507
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYN 557
+VD+LGR+GYL++A FI M I P SVWGALL ACKIH ++ L E A +L L+P N
Sbjct: 508 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 567
Query: 558 TGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRS 617
G +V LSN+YA W++V+ +R MR GL K+ G S IEI+G + F GD +HP S
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 627
Query: 618 DEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEE-KEENLNIHSERIAVAYGLISTAPGT 676
+++Y ++ + +LK G+ P VL + EE KE++LN+HSE++A+ YGLIST
Sbjct: 628 EKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPK 687
Query: 677 ILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
++R+ KNLR C +CHSV KLIS+L +REIIVRD RFHHF++G CSC D+W
Sbjct: 688 VIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 531 bits (1368), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/668 (40%), Positives = 399/668 (59%), Gaps = 1/668 (0%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF 120
+LI + HL QIH LI L H+ FL+ L+ + Y+ LF P++F
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIF 77
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
L+N++I G+ ++LF T++++ +R+ G+ GFTFP VLKACT +L +H V
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
++ GF DV L+++Y+ G + A +FD + DR+VV+WT++ SGY +G EA+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 241 RLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFY 300
LF +M VK D +V ++ A V DL+ G + + +M + + +L Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
AKCG++ ARS FD M ++ W+ MI GYA N +E ++LF +M+ N+KPD ++
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK 420
+ A +G+L L +W + + E+ +++F+ ALIDMYAKCG + VF EK
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
D+++ +A I G +G + ++ + G+ P+ TF+GLL C H+GL+++G F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 481 HCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH 539
+ + + ++ EHY C+VDL GRAG LD AY I M + P VWGALLS C++ +
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKD 497
Query: 540 VTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIE 599
L E K+L +L+P+N G+YVQLSN+Y+ WD A VR +M +KG+ K GYS IE
Sbjct: 498 TQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Query: 600 INGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIH 659
+ GK+ F DKSHP SD+IY +++ L ++ +GFVP TE V D+ EEKE L H
Sbjct: 558 LEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYH 617
Query: 660 SERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDG 719
SE++AVA GLIST G ++R+ KNLR C +CH V+KLISK+ REI+VRD NRFH F +G
Sbjct: 618 SEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNG 677
Query: 720 LCSCGDYW 727
CSC DYW
Sbjct: 678 SCSCNDYW 685
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 521 bits (1342), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/708 (37%), Positives = 404/708 (57%), Gaps = 45/708 (6%)
Query: 28 FLKFIKHLCSSSVLNLGHVVSLDHGLNLDSFY--ASLIDNSTHKRHLDQIHNQLIVSGLK 85
F KF SSS+ L LD ++ + ++D R L +H+++I+ L+
Sbjct: 16 FRKFQSRKVSSSLPKL----ELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLR 71
Query: 86 HNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM 145
N L KL+ ++L + ARK+FDE +V + N +IR Y + + ++++G M
Sbjct: 72 CNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 146 RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNI 205
V PD +TFP VLKAC+ + +HG + G +FV NGLV+MY KCG +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 206 GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
AR+V D ++ R VVSW S++ GYAQN +AL + +M + + D + S++ A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWN 325
+ V+ + F +M S++ WN
Sbjct: 252 SN---------------------------------TTTENVMYVKDMFFKMGKKSLVSWN 278
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
MI Y KN EAV+L+ M +PD+V++ S A +L L + + Y+ +
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 386 EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
+ ++ + ALIDMYAKCG +E AR VF+ +DV+ W+AMI YG G+G +A+ L+
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 446 HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGR 504
++ +G+ P+ + F+ L AC+H+GL+ EG F M + I PR EH +C+VDLLGR
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGR 458
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
AG + +AY FI MS+EP VWGALL AC++H +G AA KLF L P +G+YV L
Sbjct: 459 AGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLL 518
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
SN+YA + W+ V ++R +M+ KGL K+ G S +E+N + F VGD+SHP+SDEIY E+
Sbjct: 519 SNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYREL 578
Query: 625 QRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTA-----PGTILR 679
L +++KE+G+VP +ES LHD+ E+KE +L +HSE++A+ + L++T +R
Sbjct: 579 DVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIR 638
Query: 680 ITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
ITKNLR C +CH KLIS++ REII+RD NRFH F+ G+CSCGDYW
Sbjct: 639 ITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 271/704 (38%), Positives = 411/704 (58%), Gaps = 37/704 (5%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNG---SSNLGHICYARKLFDEFSHP 117
SL+ N + L IH Q+I GL + + ++KL+ S + + YA +F P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
++ +WN + RG++ S+ + +++Y M G+ P+ +TFP+VLK+C + F+ +H
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 178 GQVIRYGFGPDVFVQNGLVAMY-------------------------------AKCGNIG 206
G V++ G D++V L++MY A G I
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG 266
A+ +FD + + VVSW ++ISGYA+ G EAL LF M T+V+ D +V++V A
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 267 DVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNA 326
+E GR +H I GF ++ +L Y+KCG++ A F+++ VI WN
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK-- 384
+I GY +EA+ LF+EM+ P+ VT+ S A A +G++ + +W+ Y+ K
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ + T+LIDMYAKCG++E+A VF+ K + W+AMI G+ +HG+ + +L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLG 503
+ MR+ G+ P+D+TF+GLL+AC+HSG++ G +F M + + + P+ EHY C++DLLG
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
+G +A + I M +EP +W +LL ACK+H +V LGE A+ L ++P N G YV
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVL 577
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
LSN+YAS+ W+ VA R L+ +KG+ K G S IEI+ + F +GDK HPR+ EIY
Sbjct: 578 LSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 637
Query: 624 IQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKN 683
++ +E L++ GFVP T VL ++ E KE L HSE++A+A+GLIST PGT L I KN
Sbjct: 638 LEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 697
Query: 684 LRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
LR C NCH KLISK+ +REII RD RFHHF+DG+CSC DYW
Sbjct: 698 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 503 bits (1294), Expect = e-142, Method: Compositional matrix adjust.
Identities = 268/689 (38%), Positives = 408/689 (59%), Gaps = 14/689 (2%)
Query: 49 LDHGLNLDSFYASLIDNS-THKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
+ G+ +DS+ S + S + R + +Q+H ++ SG + LV +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV 246
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
ARK+FDE + DV WN+II GY + L + ++ M G++ D T V C
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC 306
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
+ L VH ++ F + N L+ MY+KCG++ A+ VF ++DR+VVS+T
Sbjct: 307 ADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYT 366
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK- 283
S+I+GYA+ G A EA++LF +M + D + +++ L++G+ +H I +
Sbjct: 367 SMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Query: 284 -MGFEDEPDLLIS--LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
+GF D+ +S L YAKCG + A F +M+ +I WN +I GY+KN +A EA
Sbjct: 427 DLGF----DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 341 VDLFREMIT-RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
+ LF ++ + PD TV A A + + + + Y+ ++ Y SD V +L+D
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 542
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
MYAKCG + A ++FD + KD++ W+ MI GYG+HG G EAI L++ MRQAG+ ++++
Sbjct: 543 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 460 FIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
F+ LL AC+HSGLV EGW F+ MR IEP EHY+C+VD+L R G L +AY FI M
Sbjct: 603 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Query: 519 SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVA 578
I P ++WGALL C+IH V L E A+K+F L+P NTG+YV ++N+YA + W+ V
Sbjct: 663 PIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVK 722
Query: 579 HVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVP 638
+R + ++GL K+ G S IEI G++ +F GD S+P ++ I ++++ R+ E G+ P
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Query: 639 HTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLIS 698
T+ L D EKEE L HSE++A+A G+IS+ G I+R+TKNLR C +CH + K +S
Sbjct: 783 LTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMS 842
Query: 699 KLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KL REI++RD+NRFH FKDG CSC +W
Sbjct: 843 KLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 241/461 (52%), Gaps = 9/461 (1%)
Query: 84 LKHNGFLI-----TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNT 138
++ NGF+I +KL +N G + A ++FDE WN ++ ++S F +
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 179
Query: 139 IEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM 198
I ++ M GV+ D +TF V K+ + L +HG +++ GFG V N LVA
Sbjct: 180 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 239
Query: 199 YAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIAL 258
Y K + AR VFD + +R V+SW SII+GY NG A + L +F QM + +++D +
Sbjct: 240 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 299
Query: 259 VSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT 318
VS+ D + GR++H +K F E +L Y+KCG + A++ F +M
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 319 SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWM 378
SV+ + +MI+GYA+ G A EAV LF EM I PD TV + A+ L + +
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 379 DDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
+++ +++ DIFV+ AL+DMYAKCG+++ A +VF KD+I W+ +I GY +
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 439 WEAINLYH-AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF-HCMRGFGIEPRNEHYS 496
EA++L++ + + P++ T +L AC +G E+ + MR R+ S
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 497 CVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
+VD+ + G L A+ ++ + VS W +++ +H
Sbjct: 540 -LVDMYAKCGALLLAHMLFDDIASKDLVS-WTVMIAGYGMH 578
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 179/395 (45%), Gaps = 14/395 (3%)
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
DR+V + + + ++G A++L D+ D L S+++ D L+ G+
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKE 115
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+ I GF + +L L+ Y CG + A FD++K + WN +++ AK+G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
++ LF++M++ ++ DS T + + + + S+ + + ++ KS + V +
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
L+ Y K V+SAR VFD +E+DVI W+++I GY +G + ++++ M +G+ +
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY-SCVVDLLGRAGYLDQAYDFI 515
T + + C S L+ G H + R + + + ++D+ + G LD A
Sbjct: 296 LATIVSVFAGCADSRLISLG-RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 516 MKMSIEPGVSVWGALLSACK---IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSR 572
+MS VS + + V L E ++ S D Y + N A R
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV---TAVLNCCARYR 411
Query: 573 LWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVF 607
L D V ++E DLG+ + N + ++
Sbjct: 412 LLDEGKRVHEWIKE----NDLGFDIFVSNALMDMY 442
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 270/695 (38%), Positives = 412/695 (59%), Gaps = 8/695 (1%)
Query: 37 SSSVLNLGHVVSLDHGLNLD-SFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLV 95
SS V+ + L GL D + S++ ++IH + G + ++ L+
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLI 192
Query: 96 NGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGF 155
+ S + AR LFDE D+ WNA+I GY +S + + + +R D
Sbjct: 193 HLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSV 248
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL 215
T +L ACTE DF +H I++G ++FV N L+ +YA+ G + + VFD +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 216 NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGR 275
R ++SW SII Y N + L A+ LF +MR + ++ D + L+S+ + D+ R
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACR 368
Query: 276 SLHGCIIKMG-FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
S+ G ++ G F ++ + ++ YAK G V AR+ F+ + + VI WN +ISGYA+N
Sbjct: 369 SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQN 428
Query: 335 GHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
G A EA++++ M I + T S A +Q G+L+ + + K+ D+FV
Sbjct: 429 GFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV 488
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
T+L DMY KCG +E A +F + + + W+ +I +G HG G +A+ L+ M GV
Sbjct: 489 VTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGV 548
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAY 512
P+ +TF+ LL+AC+HSGLV EG F M+ +GI P +HY C+VD+ GRAG L+ A
Sbjct: 549 KPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETAL 608
Query: 513 DFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSR 572
FI MS++P S+WGALLSAC++H +V LG+ A++ LF ++P + G++V LSN+YAS+
Sbjct: 609 KFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAG 668
Query: 573 LWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLK 632
W+ V +R + KGL K G+S +E++ K++VF+ G+++HP +E+Y E+ L+ +LK
Sbjct: 669 KWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Query: 633 EIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHS 692
IG+VP VL D+ +EKE L HSER+A+A+ LI+T T +RI KNLR C +CHS
Sbjct: 729 MIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHS 788
Query: 693 VIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
V K ISK+ EREIIVRD+NRFHHFK+G+CSCGDYW
Sbjct: 789 VTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/468 (32%), Positives = 249/468 (53%), Gaps = 11/468 (2%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H +L+VS N + KLVN LG++ AR FD + DV+ WN +I GY R+
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 135 FRNTIEMYGL-MRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
I + L M G+ PD TFP VLKAC ++D +H +++GF DV+V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ +Y++ +G AR++FD + R + SW ++ISGY Q+G A EAL L N +R +
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AM 245
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D + +VS++ A + D +G ++H IK G E E + L YA+ G++ + F
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
D+M +I WN++I Y N A+ LF+EM I+PD +T+ S A +Q+G ++
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 374 LAQWMDDY-VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ + + + K + DI + A++ MYAK G V+SAR VF+ DVI W+ +I GY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 433 GLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
+G EAI +Y+ M + G + N T++ +L AC+ +G +R+G +L + G+
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH 539
+ + D+ G+ G L+ A ++ V W L++ H H
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGH 532
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
+L+ A+ + + S+ ++ ++ L+++Y GNV AR FD +DV W+ MI
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 431 GYGLHGQGWEAINLYHA-MRQAGVCPNDVTFIGLLTAC 467
GYG G E I + M +G+ P+ TF +L AC
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 486 bits (1252), Expect = e-137, Method: Compositional matrix adjust.
Identities = 275/762 (36%), Positives = 410/762 (53%), Gaps = 99/762 (12%)
Query: 65 NSTHKRHLDQ-IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWN 123
N ++ R Q +H ++I SGL + +L+ L+N S G+ +ARKLFDE F WN
Sbjct: 25 NKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWN 84
Query: 124 AIIRGYSRSNLFRNTIEMY-------------------------------GLMRREGVDP 152
++ YS+ +T E + G M +EG++P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF 212
FT VL + VH +++ G +V V N L+ MYAKCG+ MA+ VF
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 213 D-------------------------------GLNDRTVVSWTSIISGYAQNGEALEALR 241
D + +R +V+W S+ISG+ Q G L AL
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALD 264
Query: 242 LFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFY 300
+F++M R++ + D L S++ A +++ L G+ +H I+ GF+ +L +L + Y
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMY 324
Query: 301 AKCGQVIVARSFFDQ---------------------------------MKTSSVIMWNAM 327
++CG V AR +Q +K V+ W AM
Sbjct: 325 SRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAM 384
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
I GY ++G EA++LFR M+ +P+S T+ + ++ + SL + + KS
Sbjct: 385 IVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGE 444
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDRTS-EKDVIMWSAMIMGYGLHGQGWEAINLYH 446
+ V+ ALI MYAK GN+ SA FD E+D + W++MI+ HG EA+ L+
Sbjct: 445 IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG-IEPRNEHYSCVVDLLGRA 505
M G+ P+ +T++G+ +AC H+GLV +G + F M+ I P HY+C+VDL GRA
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 506 GYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLS 565
G L +A +FI KM IEP V WG+LLSAC++H+++ LG+ AA++L L+P N+G Y L+
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624
Query: 566 NLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ 625
NLY++ W+ A +R M++ + K+ G+S IE+ K+ VF V D +HP +EIY ++
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMK 684
Query: 626 RLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLR 685
++ +K++G+VP T SVLHDL E KE+ L HSE++A+A+GLIST T LRI KNLR
Sbjct: 685 KIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLR 744
Query: 686 ACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
C +CH+ IK ISKLV REIIVRD RFHHFKDG CSC DYW
Sbjct: 745 VCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/669 (38%), Positives = 396/669 (59%), Gaps = 16/669 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H + G + N F+I LV LG + ++ L F D+ WN ++ ++
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG-FGPDVFVQ 192
+E M EGV+PD FT VL AC+ L R +H ++ G + FV
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
+ LV MY C + R VFDG+ DR + W ++I+GY+QN EAL LF M +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 253 L-DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
L + + +V A + ++HG ++K G + + + +L Y++ G++ +A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM--ITRNI---------KPDSVTVR 360
F +M+ ++ WN MI+GY + H E+A+ L +M + R + KP+S+T+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK 420
+ + A + +L + + Y K+ A+D+ V +AL+DMYAKCG ++ +R VFD+ +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
+VI W+ +IM YG+HG G EAI+L M GV PN+VTFI + AC+HSG+V EG +F
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 481 HCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE-PGVSVWGALLSACKIHR 538
+ M+ +G+EP ++HY+CVVDLLGRAG + +AY + M + W +LL A +IH
Sbjct: 642 YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 539 HVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
++ +GE AA+ L L+P HYV L+N+Y+S+ LWD VR M+E+G+ K+ G S I
Sbjct: 702 NLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Query: 599 EINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNI 658
E ++ F GD SHP+S+++ ++ L R+++ G+VP T VLH++ +EKE L
Sbjct: 762 EHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCG 821
Query: 659 HSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKD 718
HSE++A+A+G+++T+PGTI+R+ KNLR C +CH K ISK+V+REII+RD RFH FK+
Sbjct: 822 HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKN 881
Query: 719 GLCSCGDYW 727
G CSCGDYW
Sbjct: 882 GTCSCGDYW 890
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 16/437 (3%)
Query: 117 PDVFL--------WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL 168
P +F+ W ++R RSNL R + Y M G+ PD + FP +LKA +L
Sbjct: 52 PSIFISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQ 111
Query: 169 DFRLSCLVHGQVIRYGFGPD-VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
D L +H V ++G+G D V V N LV +Y KCG+ G VFD +++R VSW S+I
Sbjct: 112 DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDV---DDLEQGRSLHGCIIKM 284
S + AL F M + +V+ LVS+V A ++ + L G+ +H ++
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G E ++ +L A Y K G++ ++ ++ WN ++S +N EA++
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS-EYASDIFVNTALIDMYAK 403
REM+ ++PD T+ S A + + L+ + + Y K+ + FV +AL+DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 404 CGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ-AGVCPNDVTFIG 462
C V S R VFD ++ + +W+AMI GY + EA+ L+ M + AG+ N T G
Sbjct: 351 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 410
Query: 463 LLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEP 522
++ AC SG + + G++ + ++D+ R G +D A KM +
Sbjct: 411 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-DR 469
Query: 523 GVSVWGALLSACKIHRH 539
+ W +++ H
Sbjct: 470 DLVTWNTMITGYVFSEH 486
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 211/460 (45%), Gaps = 18/460 (3%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
LVN G K+FD S + WN++I + +E + M E V+P
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP---DVFVQNGLVAMYAKCGNIGMARV 210
FT V+ AC+ L ++ QV YG + F+ N LVAMY K G + ++V
Sbjct: 199 SFTLVSVVTACSN-LPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
+ R +V+W +++S QN + LEAL +M V+ D + S++ A ++
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLIS-LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
L G+ LH +K G DE + S L Y C QV+ R FD M + +WNAMI+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 330 GYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
GY++N H +EA+ LF M + + +S T+ A + G+ + + +V K
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
D FV L+DMY++ G ++ A +F + ++D++ W+ MI GY +A+ L H M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 449 R-----------QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSC 497
+ + + PN +T + +L +C + +G E+ + S
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
+VD+ + G L + ++ + V W ++ A +H
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+ IH ++ GL + F+ L++ S LG I A ++F + D+ WN +I GY S
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 133 NLFRNTI----EMYGLMR-------REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
+ + +M L R R + P+ T +L +C L +H I
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
+ DV V + LV MYAKCG + M+R VFD + + V++W II Y +G EA+
Sbjct: 545 KNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAID 604
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG-RSLHGCIIKMGFEDEPDLLISLTAFY 300
L M VK + + +S+ A +++G R + G E D +
Sbjct: 605 LLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLL 664
Query: 301 AKCGQVIVARSFFDQM 316
+ G++ A + M
Sbjct: 665 GRAGRIKEAYQLMNMM 680
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/609 (39%), Positives = 369/609 (60%), Gaps = 9/609 (1%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
WN +R + +LF +I +Y M R G PD F+FP++LK+C L +H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD--GLNDRTVVSWTSIISGYAQNGEALEA 239
+ G + FV L++MY KCG + AR VF+ + + V + ++ISGY N + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
+F +M+ T V +D + ++ +V + L GRSLHG +K G + E +L S
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
Y KCG V R FD+M +I WNA+ISGY++NG A + ++L+ +M + + PD T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
S + A +G+ K+ + V + + ++FV+ A I MYA+CGN+ AR VFD
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
K ++ W+AMI YG+HG G + L+ M + G+ P+ F+ +L+AC+HSGL +G EL
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 480 FHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHR 538
F M R + +EP EHYSC+VDLLGRAG LD+A +FI M +EP +VWGALL ACKIH+
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 539 HVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
+V + E A K+ +P N G+YV +SN+Y+ S+ + + +RV+MRE+ K GYS +
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 599 EINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNI 658
E G++ +F GD+SH +++E++ + LE + E+ + EE
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSSTTRE 554
Query: 659 HSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKD 718
HSER+A+A+G++++ PGT + + KNLR C +CH +K +SK+V+R+ +VRDA+RFH+FKD
Sbjct: 555 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 614
Query: 719 GLCSCGDYW 727
G+CSC DYW
Sbjct: 615 GVCSCKDYW 623
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 191/402 (47%), Gaps = 22/402 (5%)
Query: 49 LDHGLNLDSFYASLIDNSTHKRHL----DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
L G + D+F I S L Q+H + G + F++T L++ G +
Sbjct: 45 LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLV 104
Query: 105 CYARKLFDEFSHPDVF--LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
ARK+F+E +NA+I GY+ ++ + M+ M+ GV D T ++
Sbjct: 105 ADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVP 164
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
CT L +HGQ ++ G +V V N + MY KCG++ R +FD + + +++
Sbjct: 165 LCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT 224
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
W ++ISGY+QNG A + L L+ QM+++ V D LVS++ + + + G + +
Sbjct: 225 WNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVE 284
Query: 283 KMGFEDEPDLLIS--LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
GF P++ +S + YA+CG + AR+ FD M S++ W AMI Y +G E
Sbjct: 285 SNGF--VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIG 342
Query: 341 VDLFREMITRNIKPDSVTVRSAALASAQVG----SLKLAQWMDDYVSKSEYASDIFVN-- 394
+ LF +MI R I+PD A + G L+L + M K EY +
Sbjct: 343 LMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM-----KREYKLEPGPEHY 397
Query: 395 TALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLH 435
+ L+D+ + G ++ A + E D +W A++ +H
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIH 439
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 4/286 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+H Q + GL ++ + G + R+LFDE + WNA+I GYS++
Sbjct: 177 SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L + +E+Y M+ GV PD FT VL +C L ++ V V GF P+VFV N
Sbjct: 237 LAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSN 296
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
++MYA+CGN+ AR VFD + +++VSWT++I Y +G L LF+ M ++
Sbjct: 297 ASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRP 356
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIK-MGFEDEPDLLISLTAFYAKCGQVIVARSF 312
D V ++ A ++G L + + E P+ L + G++ A F
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 313 FDQMKTSS-VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
+ M +W A++ + + + A F ++I +P+++
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI--EFEPNNI 460
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/704 (37%), Positives = 401/704 (56%), Gaps = 49/704 (6%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+ H +V+G N F+ LV S + ARK+FDE S DV WN+II Y++
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 133 NLFRNTIEMYGLMRRE-GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ +EM+ M E G PD T VL C L L +H + ++FV
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N LV MYAKCG + A VF ++ + VVSW ++++GY+Q G +A+RLF +M+ +
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 252 KLD---W--------------------------------IALVSIVRAYGDVDDLEQGRS 276
K+D W + L+S++ V L G+
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 277 LHGCIIKM-------GFEDEPDLLISLTAFYAKCGQVIVARSFFDQM--KTSSVIMWNAM 327
+H IK G DE ++ L YAKC +V AR+ FD + K V+ W M
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 328 ISGYAKNGHAEEAVDLFREMITRN--IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
I GY+++G A +A++L EM + +P++ T+ A +A A + +L++ + + Y ++
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 386 EY-ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ A +FV+ LIDMYAKCG++ AR+VFD K+ + W++++ GYG+HG G EA+ +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLG 503
+ MR+ G + VT + +L AC+HSG++ +G E F+ M+ FG+ P EHY+C+VDLLG
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
RAG L+ A I +M +EP VW A LS C+IH V LGEYAA+K+ L + G Y
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
LSNLYA++ W V +R LMR KG+ K G S +E F VGDK+HP + EIY
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQV 746
Query: 624 IQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKN 683
+ +R+K+IG+VP T LHD++ EEK++ L HSE++A+AYG+++T G +RITKN
Sbjct: 747 LLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKN 806
Query: 684 LRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
LR C +CH+ +S++++ +II+RD++RFHHFK+G CSC YW
Sbjct: 807 LRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/520 (30%), Positives = 242/520 (46%), Gaps = 66/520 (12%)
Query: 75 IHNQLIVSG-LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPD--VFLWNAIIRGYSR 131
IH +L+ G L N L + L++ ++G + +A L F D V+ WN++IR Y
Sbjct: 47 IHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ + ++GLM PD +TFP+V KAC E+ R H + GF +VFV
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT-D 250
N LVAMY++C ++ AR VFD ++ VVSW SII YA+ G+ AL +F++M N
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
+ D I LV+++ + G+ LH + + L YAKCG + A
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF-------------------------- 344
+ F M V+ WNAM++GY++ G E+AV LF
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 345 ---------REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY-------VSKSEYA 388
R+M++ IKP+ VT+ S A VG+L + + Y + K+ +
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTS--EKDVIMWSAMIMGYGLHGQGWEAINLYH 446
+ V LIDMYAKC V++AR +FD S E+DV+ W+ MI GY HG +A+ L
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 447 AM--RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYS-------C 497
M PN T L AC +R G ++ + + RN+ + C
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQI----HAYAL--RNQQNAVPLFVSNC 518
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
++D+ + G + A M + V+ W +L++ +H
Sbjct: 519 LIDMYAKCGSISDARLVFDNMMAKNEVT-WTSLMTGYGMH 557
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 188/429 (43%), Gaps = 53/429 (12%)
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL 215
T P++ K C + +L +H +++ +G + + + L++ Y G + A +
Sbjct: 31 TPPFIHK-CKTISQVKL---IHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRF 85
Query: 216 --NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+D V W S+I Y NG A + L LF M + D + +A G++ +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
G S H + GF + +L A Y++C + AR FD+M V+ WN++I YAK
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 334 NGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
G + A+++F M +PD++T+ + A +G+ L + + + SE ++F
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM------------------------ 428
V L+DMYAKCG ++ A VF S KDV+ W+AM
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 429 -----------IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
I GY G G+EA+ + M +G+ PN+VT I +L+ C G + G
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 478 ELFHC--------MRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSI-EPGVSVWG 528
E+ HC +R G N + ++D+ + +D A +S E V W
Sbjct: 386 EI-HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 529 ALLSACKIH 537
++ H
Sbjct: 445 VMIGGYSQH 453
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/658 (38%), Positives = 382/658 (58%), Gaps = 8/658 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++ +GL + L+N G++ AR LFD+ V WN++I GY+ +
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L + M+ MR V +F V+K C L + R + +H V++YGF D ++
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 194 GLVAMYAKCGNIGMARVVFDGLN-DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
L+ Y+KC + A +F + VVSWT++ISG+ QN EA+ LF++M+ V+
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ I+ A + E +H ++K +E + +L Y K G+V A
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA-LASAQVGS 371
F + ++ W+AM++GYA+ G E A+ +F E+ IKP+ T S + +A S
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
+ + + KS S + V++AL+ MYAK GN+ESA VF R EKD++ W++MI G
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEP 490
Y HGQ +A++++ M++ V + VTFIG+ AC H+GLV EG + F M R I P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
EH SC+VDL RAG L++A I M G ++W +L+AC++H+ LG AA+K+
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
++ P ++ YV LSN+YA S W A VR LM E+ + K+ GYS IE+ K F G
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 611 DKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLI 670
D+SHP D+IY +++ L RLK++G+ P T VL D++ E KE L HSER+A+A+GLI
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLI 810
Query: 671 STAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHF-KDGLCSCGDYW 727
+T G+ L I KNLR C +CH VIKLI+K+ EREI+VRD+NRFHHF DG+CSCGD+W
Sbjct: 811 ATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 236/469 (50%), Gaps = 13/469 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H Q I G + + T LV+ + RK+FDE +V W +I GY+R++
Sbjct: 114 QLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + ++ M+ EG P+ FTF L E VH V++ G + V N
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ +Y KCGN+ AR++FD ++VV+W S+ISGYA NG LEAL +F MR V+L
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ S+++ ++ +L LH ++K GF + ++ +L Y+KC ++ A F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 314 DQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
++ +V+ W AMISG+ +N EEAVDLF EM + ++P+ T S L + V S
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY-SVILTALPVIS- 411
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ V K+ Y V TAL+D Y K G VE A VF +KD++ WSAM+ GY
Sbjct: 412 --PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGY 469
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
G+ AI ++ + + G+ PN+ TF +L C + + FH GF I+ R
Sbjct: 470 AQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH---GFAIKSRL 526
Query: 493 EHYSCVVDLL----GRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
+ CV L + G ++ A + + K E + W +++S H
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQH 574
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 193/390 (49%), Gaps = 8/390 (2%)
Query: 97 GSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFT 156
G+ + + A LFD+ D + +++ G+SR + ++ + R G++ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN 216
F VLK L D +H Q I++GF DV V LV Y K N R VFD +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
+R VV+WT++ISGYA+N E L LF +M+N + + + + + +G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+H ++K G + + SL Y KCG V AR FD+ + SV+ WN+MISGYA NG
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
EA+ +F M ++ + S A + L+ + + V K + D + TA
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 397 LIDMYAKC-GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
L+ Y+KC +++ R+ + +V+ W+AMI G+ + EA++L+ M++ GV P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 456 NDVTFIGLLTACN-------HSGLVREGWE 478
N+ T+ +LTA H+ +V+ +E
Sbjct: 396 NEFTYSVILTALPVISPSEVHAQVVKTNYE 425
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 11/298 (3%)
Query: 193 NGLVAMYAKC-GNIGMARV-----VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
NG+ + C G + +R+ +FD R S+ S++ G++++G EA RLF +
Sbjct: 25 NGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNI 84
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQV 306
+++D S+++ + D GR LH IK GF D+ + SL Y K
Sbjct: 85 HRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNF 144
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA--AL 364
R FD+MK +V+ W +ISGYA+N +E + LF M +P+S T +A L
Sbjct: 145 KDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVL 204
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIM 424
A VG L + V K+ I V+ +LI++Y KCGNV ARI+FD+T K V+
Sbjct: 205 AEEGVGGRGLQ--VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 262
Query: 425 WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
W++MI GY +G EA+ ++++MR V ++ +F ++ C + +R +L HC
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL-HC 319
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A + FD+ + +++ G++++G +EA LF + ++ D S SA
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ + + K + D+ V T+L+D Y K N + R VFD E++V+ W+ +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
I GY + E + L+ M+ G PN TF L G+ G ++ + G+
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ + +++L + G + +A K ++ V W +++S
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISG 269
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/655 (37%), Positives = 382/655 (58%), Gaps = 1/655 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H G N + L+N + I A F E +V LWN ++ Y +
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
RN+ ++ M+ E + P+ +T+P +LK C L D L +H Q+I+ F + +V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ MYAK G + A + + VVSWT++I+GY Q +AL F QM + ++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS 589
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D + L + V A + L++G+ +H GF + +L Y++CG++ + F
Sbjct: 590 DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAF 649
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+Q + I WNA++SG+ ++G+ EEA+ +F M I ++ T SA A+++ ++K
Sbjct: 650 EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMK 709
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + ++K+ Y S+ V ALI MYAKCG++ A F S K+ + W+A+I Y
Sbjct: 710 QGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYS 769
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRN 492
HG G EA++ + M + V PN VT +G+L+AC+H GLV +G F M +G+ P+
Sbjct: 770 KHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKP 829
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
EHY CVVD+L RAG L +A +FI +M I+P VW LLSAC +H+++ +GE+AA L
Sbjct: 830 EHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLE 889
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK 612
L+P ++ YV LSNLYA S+ WD R M+EKG+ K+ G S IE+ + F+VGD+
Sbjct: 890 LEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQ 949
Query: 613 SHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIST 672
+HP +DEI+ Q L +R EIG+V S+L++L +E+K+ + IHSE++A+++GL+S
Sbjct: 950 NHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSL 1009
Query: 673 APGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ + KNLR C +CH+ IK +SK+ REIIVRDA RFHHF+ G CSC DYW
Sbjct: 1010 PATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 240/461 (52%), Gaps = 2/461 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
++H+Q++ GL NG L KL + G + A K+FDE +F WN +I+ + N
Sbjct: 106 KLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACT-ELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
L ++ M E V P+ TF VL+AC + F + +H +++ G V
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L+ +Y++ G + +AR VFDGL + SW ++ISG ++N EA+RLF M +
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
A S++ A ++ LE G LHG ++K+GF + + +L + Y G +I A
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F M + +N +I+G ++ G+ E+A++LF+ M ++PDS T+ S +A + G+L
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
Q + Y +K +AS+ + AL+++YAKC ++E+A F T ++V++W+ M++ Y
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
GL + ++ M+ + PN T+ +L C G + G ++ + +
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
S ++D+ + G LD A+D +++ + + VS W +++
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WTTMIAG 565
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 234/465 (50%), Gaps = 7/465 (1%)
Query: 72 LDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR 131
++QIH +++ GL+ + + L++ S G + AR++FD D W A+I G S+
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ I ++ M G+ P + F VL AC ++ + +HG V++ GF D +V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N LV++Y GN+ A +F ++ R V++ ++I+G +Q G +A+ LF +M +
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ D L S+V A L +G+ LH K+GF + +L YAKC + A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
+F + + +V++WN M+ Y + +FR+M I P+ T S ++G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L+L + + + K+ + + +V + LIDMYAK G +++A + R + KDV+ W+ MI G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF--HCMRGFGIE 489
Y + +A+ + M G+ ++V ++AC ++EG ++ C+ GF +
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSV-WGALLSA 533
++ +V L R G ++++Y + E G ++ W AL+S
Sbjct: 626 LPFQN--ALVTLYSRCGKIEESY--LAFEQTEAGDNIAWNALVSG 666
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 185/365 (50%), Gaps = 2/365 (0%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+QIH+Q+I + + N ++ + L++ + LG + A + F+ DV W +I GY++
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
N + + M G+ D + AC L + +H Q GF D+ Q
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N LV +Y++CG I + + F+ ++W +++SG+ Q+G EALR+F +M +
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ S V+A + +++QG+ +H I K G++ E ++ +L + YAKCG + A
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F ++ T + + WNA+I+ Y+K+G EA+D F +MI N++P+ VT+ A + +G +
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 373 -KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR-IVFDRTSEKDVIMWSAMIM 430
K + + S+ + ++DM + G + A+ + + + D ++W ++
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 431 GYGLH 435
+H
Sbjct: 870 ACVVH 874
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 165/407 (40%), Gaps = 55/407 (13%)
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK-----LDWIALVSIV 262
R VF L S+ +I S Y E+ + R+ + + N ++ L W+ L +
Sbjct: 39 TRTVFPTLCGTRRASFAAI-SVYISEDESFQEKRI-DSVENRGIRPNHQTLKWL-LEGCL 95
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
+ G +D +GR LH I+K+G + L L FY G + A FD+M ++
Sbjct: 96 KTNGSLD---EGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 152
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK--LAQWMDD 380
WN MI A E LF M++ N+ P+ T S L + + GS+ + + +
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF-SGVLEACRGGSVAFDVVEQIHA 211
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
+ V LID+Y++ G V+ AR VFD KD W AMI G + E
Sbjct: 212 RILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAE 271
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN-------- 492
AI L+ M G+ P F +L+AC + G +L + G
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 493 -----------EH------------YSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSV 526
EH Y+ +++ L + GY ++A + +M +EP +
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 527 WGALLSACK----IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
+L+ AC + R L Y K F+ + G L NLYA
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG---ALLNLYA 435
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/725 (33%), Positives = 397/725 (54%), Gaps = 71/725 (9%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q H +++ SG +++G++ KL+ SN A + P ++ ++++I +++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
LF +I ++ M G+ PD P + K C EL F++ +H G D FVQ
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVV-------------------------------- 221
+ MY +CG +G AR VFD ++D+ VV
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 222 ---SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
SW I+SG+ ++G EA+ +F ++ + D + + S++ + GD + L GR +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS------------------- 319
G +IK G + ++ ++ Y K G V S F+Q +
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 320 ----------------SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
+V+ W ++I+G A+NG EA++LFREM +KP+ VT+ S
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
A + +L + + + ++ V +ALIDMYAKCG + ++IVF+ K+++
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLV 455
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM 483
W++++ G+ +HG+ E ++++ ++ + + P+ ++F LL+AC GL EGW+ F M
Sbjct: 456 CWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
Query: 484 -RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTL 542
+GI+PR EHYSC+V+LLGRAG L +AYD I +M EP VWGALL++C++ +V L
Sbjct: 516 SEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 543 GEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING 602
E AA+KLF L+P N G YV LSN+YA+ +W V +R M GL K+ G S I++
Sbjct: 576 AEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKN 635
Query: 603 KLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSER 662
++ GDKSHP+ D+I ++ + + +++ G P+ + LHD+ +E+E+ L HSE+
Sbjct: 636 RVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEK 695
Query: 663 IAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCS 722
+AV +GL++T GT L++ KNLR C +CH+VIK IS REI +RD NRFHHFKDG+CS
Sbjct: 696 LAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 723 CGDYW 727
CGD+W
Sbjct: 756 CGDFW 760
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 243/658 (36%), Positives = 386/658 (58%), Gaps = 7/658 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H + GL + L+N L +AR +FD S D+ WN++I G +++
Sbjct: 336 QVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNG 395
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLVHGQVIRYGFGPDVFVQ 192
L + ++ + R G+ PD +T VLKA + L + LS VH I+ D FV
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
L+ Y++ + A ++F+ N +V+W ++++GY Q+ + + L+LF M +
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS--LTAFYAKCGQVIVAR 310
D L ++ + G + + QG+ +H IK G++ DL +S + Y KCG + A+
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYD--LDLWVSSGILDMYVKCGDMSAAQ 572
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
FD + + W MISG +NG E A +F +M + PD T+ + A AS+ +
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
+L+ + + K +D FV T+L+DMYAKCG+++ A +F R ++ W+AM++
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIE 489
G HG+G E + L+ M+ G+ P+ VTFIG+L+AC+HSGLV E ++ M G +GI+
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
P EHYSC+ D LGRAG + QA + I MS+E S++ LL+AC++ G+ A K
Sbjct: 753 PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHV 609
L L+P ++ YV LSN+YA++ WD + R +M+ + KD G+S IE+ K+ +F V
Sbjct: 813 LLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVV 872
Query: 610 GDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGL 669
D+S+ +++ IY +++ + R +K+ G+VP T+ L D+ EEKE L HSE++AVA+GL
Sbjct: 873 DDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGL 932
Query: 670 ISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ST P T +R+ KNLR C +CH+ +K I+K+ REI++RDANRFH FKDG+CSCGDYW
Sbjct: 933 LSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 238/525 (45%), Gaps = 22/525 (4%)
Query: 82 SGLKHNGF---LITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNT 138
SGL N L+ ++ S+ G + D S ++ N + Y S +
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 139 IEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM 198
++ + M V+ D TF +L ++ L VH ++ G + V N L+ M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 199 YAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIAL 258
Y K G AR VFD +++R ++SW S+I+G AQNG +EA+ LF Q+ +K D +
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 259 VSIVRAYGDVDD-LEQGRSLHGCIIKMGFEDEPDLLISLTAFYA-----KCGQVIVARSF 312
S+++A + + L + +H IK+ + + +L Y+ K +++ R
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN 479
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
FD ++ WNAM++GY ++ + + LF M + + D T+ + + ++
Sbjct: 480 FD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAI 533
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ + Y KS Y D++V++ ++DMY KCG++ +A+ FD D + W+ MI G
Sbjct: 534 NQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
+G+ A +++ MR GV P++ T L A + + +G ++ + N
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH--ANALKLNCTN 651
Query: 493 EHY--SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH--VTLGEYAAK 548
+ + + +VD+ + G +D AY ++ + ++ W A+L H TL +
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDL 593
K + P LS S + + H+R + + G+ ++
Sbjct: 711 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 199/453 (43%), Gaps = 35/453 (7%)
Query: 83 GLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY 142
GL + F+ LVN G + + LF+E + DV LWN +++ Y I++
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 234
Query: 143 GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
G++P+ T + + + D GQV + G D
Sbjct: 235 SAFHSSGLNPNEITLRLLARISGDDSD-------AGQVKSFANGNDA------------- 274
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
++ ++F +S Y +G+ L+ F M +DV+ D + + ++
Sbjct: 275 --SSVSEIIFRNKG----------LSEYLHSGQYSALLKCFADMVESDVECDQVTFILML 322
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
VD L G+ +H +K+G + + SL Y K + AR+ FD M +I
Sbjct: 323 ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLI 382
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS-LKLAQWMDDY 381
WN++I+G A+NG EAV LF +++ +KPD T+ S A++ + L L++ + +
Sbjct: 383 SWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVH 442
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
K SD FV+TALID Y++ ++ A I+F+R + D++ W+AM+ GY G +
Sbjct: 443 AIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKT 501
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDL 501
+ L+ M + G +D T + C + +G ++ G + S ++D+
Sbjct: 502 LKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDM 561
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
+ G + A F P W ++S C
Sbjct: 562 YVKCGDMSAA-QFAFDSIPVPDDVAWTTMISGC 593
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 168/385 (43%), Gaps = 37/385 (9%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL-----FRNTIEMYG 143
FLI L++ S G + YAR++FD+ D+ WN+I+ Y++S+ + ++
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
++R++ V T +LK C S HG + G D FV LV +Y K G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
+ +V+F+ + R VV W ++ Y + G EA+ L + ++ + + I L + R
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLAR 254
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
GD D GQV + D S +I
Sbjct: 255 ISGDDSD--------------------------------AGQVKSFANGNDASSVSEIIF 282
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
N +S Y +G + F +M+ +++ D VT + +V SL L Q +
Sbjct: 283 RNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN 443
K + V+ +LI+MY K AR VFD SE+D+I W+++I G +G EA+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACN 468
L+ + + G+ P+ T +L A +
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 12/262 (4%)
Query: 169 DFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIIS 228
D L H +++ + P+ F+ N L++MY+KCG++ AR VFD + DR +VSW SI++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 229 GYAQNGEAL-----EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK 283
YAQ+ E + +A LF +R V + L +++ + S HG K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 284 MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDL 343
+G + + + +L Y K G+V + F++M V++WN M+ Y + G EEA+DL
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 344 FREMITRNIKPDSVTVRSAALAS---AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
+ + P+ +T+R A S + G +K +D S SE IF N L +
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEI---IFRNKGLSE- 289
Query: 401 YAKCGNVESARIVFDRTSEKDV 422
Y G + F E DV
Sbjct: 290 YLHSGQYSALLKCFADMVESDV 311
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 270 DLEQGRSLHGCIIKMGFEDEPD--LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
DL G+ H I+ FE+ P+ L+ +L + Y+KCG + AR FD+M ++ WN++
Sbjct: 54 DLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 328 ISGYAKNGHA-----EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
++ YA++ ++A LFR + + +T+ G + ++ Y
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
K D FV AL+++Y K G V+ +++F+ +DV++W+ M+ Y G EAI
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 443 NLYHAMRQAGVCPNDVTF 460
+L A +G+ PN++T
Sbjct: 232 DLSSAFHSSGLNPNEITL 249
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 34/213 (15%)
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG-----WEAINLYH 446
F+ LI MY+KCG++ AR VFD+ ++D++ W++++ Y + +A L+
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGW--ELFHCMRGFGIEPRNEHYSCVVDLLGR 504
+RQ V + +T +L C HSG V W E FH Y+C + L G
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYV---WASESFH------------GYACKIGLDGD 179
Query: 505 ---AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHY 561
AG L Y ++ G G +L +R V L K +
Sbjct: 180 EFVAGALVNIY-------LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA-- 230
Query: 562 VQLSNLYASSRLWDHVAHVRVLMREKGLSKDLG 594
+ LS+ + SS L + +R+L R G D G
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAG 263
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 469 bits (1206), Expect = e-132, Method: Compositional matrix adjust.
Identities = 258/698 (36%), Positives = 401/698 (57%), Gaps = 43/698 (6%)
Query: 71 HLDQIHNQLIVSGLKH--NGFLITKLVNGSSNLGHICYARKLFDEF-SHPDVFLWNAIIR 127
H+ Q+H ++ + + H N FL V+ SS YA +F S P+ ++N +R
Sbjct: 27 HIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLS--YALNVFSSIPSPPESIVFNPFLR 84
Query: 128 GYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP 187
SRS+ R TI Y +R G D F+F +LKA +++ +HG +
Sbjct: 85 DLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLC 144
Query: 188 DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR 247
D FV+ G + MYA CG I AR VFD ++ R VV+W ++I Y + G EA +LF +M+
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA------ 301
+++V D + L +IV A G ++ R+++ +I+ + LL +L YA
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 302 -------------------------KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
KCG++ A+ FDQ + ++ W MIS Y ++ +
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDY 324
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
+EA+ +F EM IKPD V++ S A A +G L A+W+ + + S++ +N A
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
LI+MYAKCG +++ R VF++ ++V+ WS+MI +HG+ +A++L+ M+Q V PN
Sbjct: 385 LINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
+VTF+G+L C+HSGLV EG ++F M + I P+ EHY C+VDL GRA L +A + I
Sbjct: 445 EVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 516 MKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWD 575
M + V +WG+L+SAC+IH + LG++AAK++ L+P + G V +SN+YA + W+
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 576 HVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIG 635
V ++R +M EK + K+ G S I+ NGK F +GDK H +S+EIY ++ + +LK G
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 636 FVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGT------ILRITKNLRACVN 689
+VP SVL D+ EEK++ + HSE++A+ +GL++ ++RI KNLR C +
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 690 CHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
CH KL+SK+ EREIIVRD RFH +K+GLCSC DYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 464 bits (1193), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/731 (35%), Positives = 408/731 (55%), Gaps = 40/731 (5%)
Query: 35 LCSSSVLNLGHVVSLDHGLNLDS----FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFL 90
LC+ ++L + ++ G++ D F S S K + QIH ++ G + F+
Sbjct: 114 LCNEAILLFLRM--MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY-GLMRREG 149
LV+ + G + ARK+FDE S +V W ++I GY+R + ++ ++++ ++R E
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
V P+ T V+ AC +L D V+ + G + + + LV MY KC I +A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
+FD + ++ S Y + G EAL +FN M ++ V+ D I+++S + + +
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
++ G+S HG +++ GFE ++ +L Y KC + A FD+M +V+ WN++++
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 330 GYAKNGHAEEAVDLFREMITRNI--------------------------------KPDSV 357
GY +NG + A + F M +NI D V
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
T+ S A A +G+L LA+W+ Y+ K+ D+ + T L+DM+++CG+ ESA +F+
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
+ +DV W+A I + G AI L+ M + G+ P+ V F+G LTAC+H GLV++G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 478 ELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
E+F+ M G+ P + HY C+VDLLGRAG L++A I M +EP +W +LL+AC++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
+V + YAA+K+ L P TG YV LSN+YAS+ W+ +A VR+ M+EKGL K G S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 597 VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENL 656
I+I GK F GD+SHP I + + +R +G VP +VL D++ +EK L
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFML 771
Query: 657 NIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHF 716
+ HSE++A+AYGLIS+ GT +RI KNLR C +CHS K SK+ REII+RD NRFH+
Sbjct: 772 SRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYI 831
Query: 717 KDGLCSCGDYW 727
+ G CSCGD+W
Sbjct: 832 RQGKCSCGDFW 842
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/643 (39%), Positives = 382/643 (59%), Gaps = 14/643 (2%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD-- 151
L++ S G I A+ +F ++ +V WN ++ G+S T ++ M G D
Sbjct: 333 LMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK 392
Query: 152 PDGFTFPYVLKACTELLDFRLSCL-----VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
D T + C F S L +H ++ F + V N VA YAKCG++
Sbjct: 393 ADEVTILNAVPVC-----FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG 266
A+ VF G+ +TV SW ++I G+AQ+ + +L QM+ + + D + S++ A
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 267 DVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNA 326
+ L G+ +HG II+ E + + +S+ + Y CG++ ++ FD M+ S++ WN
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
+I+GY +NG + A+ +FR+M+ I+ +++ A + + SL+L + Y K
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYH 446
D F+ +LIDMYAK G++ + VF+ EK W+AMIMGYG+HG EAI L+
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRA 505
M++ G P+D+TF+G+LTACNHSGL+ EG M+ FG++P +HY+CV+D+LGRA
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 506 GYLDQAYDFIMK-MSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
G LD+A + + MS E V +W +LLS+C+IH+++ +GE A KLF L+P +YV L
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 807
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
SNLYA W+ V VR M E L KD G S IE+N K+ F VG++ +EI +
Sbjct: 808 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLW 867
Query: 625 QRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNL 684
LE ++ ++G+ P T SV HDL+ EEK E L HSE++A+ YGLI T+ GT +R+ KNL
Sbjct: 868 SILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNL 927
Query: 685 RACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
R CV+CH+ KLISK++EREI+VRD RFHHFK+G+CSCGDYW
Sbjct: 928 RICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 211/416 (50%), Gaps = 12/416 (2%)
Query: 74 QIHNQLIVSG---LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
+IH +VSG L+++ L T+++ + G +R +FD ++F WNA+I YS
Sbjct: 105 KIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYS 162
Query: 131 RSNLFRNTIEMY-GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
R+ L+ +E + ++ + PD FT+P V+KAC + D + VHG V++ G DV
Sbjct: 163 RNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV 222
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM--R 247
FV N LV+ Y G + A +FD + +R +VSW S+I ++ NG + E+ L +M
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEE 282
Query: 248 NTDVKL--DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
N D D LV+++ ++ G+ +HG +K+ + E L +L Y+KCG
Sbjct: 283 NGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGC 342
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT--RNIKPDSVTVRSAA 363
+ A+ F +V+ WN M+ G++ G D+ R+M+ ++K D VT+ +A
Sbjct: 343 ITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAV 402
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
L + + Y K E+ + V A + YAKCG++ A+ VF K V
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
W+A+I G+ +++ + M+ +G+ P+ T LL+AC+ +R G E+
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 187/367 (50%), Gaps = 3/367 (0%)
Query: 72 LDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR 131
L ++H + +N + V + G + YA+++F V WNA+I G+++
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
SN R +++ + M+ G+ PD FT +L AC++L RL VHG +IR D+FV
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
++++Y CG + + +FD + D+++VSW ++I+GY QNG AL +F QM +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+L I+++ + A + L GR H +K ED+ + SL YAK G + +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
F+ +K S WNAMI GY +G A+EA+ LF EM PD +T A G
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGL 713
Query: 372 LKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEK-DVIMWSAM 428
+ +++D S ++ +IDM + G ++ A R+V + SE+ DV +W ++
Sbjct: 714 IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 429 IMGYGLH 435
+ +H
Sbjct: 774 LSSCRIH 780
Score = 172 bits (436), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 222/469 (47%), Gaps = 7/469 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H ++ +GL + F+ LV+ G + A +LFD ++ WN++IR +S +
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 135 FRNTIEMYGLMRREGVD----PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+ + G M E D PD T VL C + L VHG ++ ++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR--N 248
+ N L+ MY+KCG I A+++F N++ VVSW +++ G++ G+ + QM
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
DVK D + +++ V L + LH +K F + + A YAKCG +
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A+ F +++ +V WNA+I G+A++ ++D +M + PDS TV S A ++
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ SL+L + + ++ ++ D+FV +++ +Y CG + + + +FD +K ++ W+ +
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
I GY +G A+ ++ M G+ ++ + + AC+ +R G E +
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
E ++D+ + G + Q+ + E + W A++ IH
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIH 676
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 21/321 (6%)
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVK------LDWIALVSIVRAYGDVDDLEQGRSLHGC 280
IS + + G+ ++ R + D L AL +++A G D+E GR +H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 281 IIKMGFEDEPDLLIS-LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
+ D+L + + YA CG +R FD +++ ++ WNA+IS Y++N +E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 340 AVDLFREMI-TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
++ F EMI T ++ PD T A A + + + + V K+ D+FV AL+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 399 DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ----AGVC 454
Y G V A +FD E++++ W++MI + +G E+ L M +
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY----SCVVDLLGRAGYLDQ 510
P+ T + +L C + G + G+ ++ R + + ++D+ + G +
Sbjct: 290 PDVATLVTVLPVCAREREIGLG----KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 511 AYDFIMKMSIEPGVSVWGALL 531
A I KM+ V W ++
Sbjct: 346 A-QMIFKMNNNKNVVSWNTMV 365
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/697 (37%), Positives = 386/697 (55%), Gaps = 60/697 (8%)
Query: 82 SGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEM 141
S + +NG + L NG L ARKLFDE D+ WN +I+GY R+ E+
Sbjct: 94 SSVSYNGMISGYLRNGEFEL-----ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAREL 148
Query: 142 YGLM-RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG------ 194
+ +M R+ + Y C + + + + +VQN
Sbjct: 149 FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 195 ----------------LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALE 238
L+ + K I AR FD +N R VVSW +II+GYAQ+G+ E
Sbjct: 209 MLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDE 268
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL--------------------H 278
A +LF++ DV W A+VS Y +E+ R L
Sbjct: 269 ARQLFDESPVQDV-FTWTAMVS---GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQ 324
Query: 279 GCIIKMG---FEDEPDLLIS----LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGY 331
G ++M F+ P +S + YA+CG++ A++ FD+M + W AMI+GY
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
+++GH+ EA+ LF +M + + + SA A V +L+L + + + K Y +
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
FV AL+ MY KCG++E A +F + KD++ W+ MI GY HG G A+ + +M++
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
G+ P+D T + +L+AC+H+GLV +G + F+ M + +G+ P ++HY+C+VDLLGRAG L+
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYAS 570
A++ + M EP ++WG LL A ++H + L E AA K+F+++P N+G YV LSNLYAS
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYAS 624
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERR 630
S W V +RV MR+KG+ K GYS IEI K F VGD+ HP DEI+ ++ L+ R
Sbjct: 625 SGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLR 684
Query: 631 LKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNC 690
+K+ G+V T VLHD+ EEKE + HSER+AVAYG++ + G +R+ KNLR C +C
Sbjct: 685 MKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDC 744
Query: 691 HSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
H+ IK ++++ R II+RD NRFHHFKDG CSCGDYW
Sbjct: 745 HNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 172/410 (41%), Gaps = 88/410 (21%)
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQM----------------RNTDVKL------- 253
D + W IS Y + G EALR+F +M RN + +L
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 254 ----DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI----SLTAFYAKCGQ 305
D ++ +++ Y +L + R L FE P+ + ++ + YA+ G
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKAREL--------FEIMPERDVCSWNTMLSGYAQNGC 172
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE-----MITRN------IKP 354
V ARS FD+M + + WNA++S Y +N EEA LF+ +++ N +K
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 355 ----------DSVTVRSAA------LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
DS+ VR AQ G + A+ + D D+F TA++
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMV 288
Query: 399 DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE-AINLYHAMRQAGVCPND 457
Y + VE AR +FD+ E++ + W+AM+ GY + G+ E A L+ M C N
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGY-VQGERMEMAKELFDVM----PCRNV 343
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLG--RAGYLDQAYDFI 515
T+ ++T G + E LF M P+ + S + G ++G+ +A
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKM------PKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 516 MKMSIEPG---VSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYV 562
++M E G S + + LS C + LG+ +L Y TG +V
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK-GGYETGCFV 446
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H +L+ G + F+ L+ G I A LF E + D+ WN +I GYSR
Sbjct: 430 QLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHG 489
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
+ + M+REG+ PD T VL AC+
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLSACS 521
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 258/730 (35%), Positives = 407/730 (55%), Gaps = 40/730 (5%)
Query: 35 LCSSSVLNLGHVVSLDHGLNLDS----FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFL 90
LC+ ++L + ++ G++ D F S S K + QIH ++ G + F+
Sbjct: 114 LCNEAILLFLRM--MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY-GLMRREG 149
LV+ + G + ARK+FDE S +V W ++I GY+R + ++ ++++ ++R E
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
V P+ T V+ AC +L D V+ + G + + + LV MY KC I +A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
+FD + ++ S Y + G EAL +FN M ++ V+ D I+++S + + +
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
++ G+S HG +++ GFE ++ +L Y KC + A FD+M +V+ WN++++
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 330 GYAKNGHAEEAVDLFREMITRNI--------------------------------KPDSV 357
GY +NG + A + F M +NI D V
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
T+ S A A +G+L LA+W+ Y+ K+ D+ + T L+DM+++CG+ ESA +F+
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
+ +DV W+A I + G AI L+ M + G+ P+ V F+G LTAC+H GLV++G
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 478 ELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
E+F+ M G+ P + HY C+VDLLGRAG L++A I M +EP +W +LL+AC++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRV 651
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
+V + YAA+K+ L P TG YV LSN+YAS+ W+ +A VR+ M+EKGL K G S
Sbjct: 652 QGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Query: 597 VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENL 656
I+I GK F GD+SHP I + + +R +G VP +VL D++ +EK L
Sbjct: 712 SIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFML 771
Query: 657 NIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHF 716
+ HSE++A+AYGLIS+ GT +RI KNLR C +CHS K SK+ REII+RD NRFH+
Sbjct: 772 SRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYI 831
Query: 717 KDGLCSCGDY 726
+ G CSCGD+
Sbjct: 832 RQGKCSCGDF 841
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/706 (34%), Positives = 388/706 (54%), Gaps = 17/706 (2%)
Query: 29 LKFIKHLCSSSVLNLGHVVSLDHGLNLDSFYASLI---DNSTHKRHLDQIHNQLIVSGLK 85
K + +C SS L V+ + +L+ +++ + + Q+H + G
Sbjct: 130 FKLFRQMCRSSSCTLPDHVT----------FTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 86 HNGFLITK--LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
N FL L+ + + A LF+E D +N +I GY + L+ +I ++
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
MR+ G P FTF VLKA L DF L +H + GF D V N ++ Y+K
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHD 299
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
+ R++FD + + VS+ +IS Y+Q + +L F +M+ +++
Sbjct: 300 RVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLS 359
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
++ L+ GR LH + + + SL YAKC A F + + +
Sbjct: 360 IAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
W A+ISGY + G + LF +M N++ D T + ASA SL L + + ++
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN 443
+S ++F + L+DMYAKCG+++ A VF+ +++ + W+A+I + +G G AI
Sbjct: 480 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIG 539
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLL 502
+ M ++G+ P+ V+ +G+LTAC+H G V +G E F M +GI P+ +HY+C++DLL
Sbjct: 540 AFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLL 599
Query: 503 GRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPY-NTGHY 561
GR G +A + +M EP +W ++L+AC+IH++ +L E AA+KLFS++ + Y
Sbjct: 600 GRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 562 VQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIY 621
V +SN+YA++ W+ V V+ MRE+G+ K YS +E+N K+ VF D++HP DEI
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 622 NEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRIT 681
+I L ++ G+ P T SV+ D++ + K E+L HSER+AVA+ LIST G + +
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVM 779
Query: 682 KNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KNLRAC +CH+ IKLISK+V+REI VRD +RFHHF +G+CSCGDYW
Sbjct: 780 KNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 211/465 (45%), Gaps = 33/465 (7%)
Query: 87 NGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
N +++G G + AR LFD V W ++ Y+R++ F +++ M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 147 REG--VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF--VQNGLVAMYAKC 202
R PD TF +L C + + VH ++ GF + F V N L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
+ +A V+F+ + ++ V++ ++I+GY ++G E++ LF +MR + + ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
+A + D G+ LH + GF + + + FY+K +V+ R FD+M +
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
+N +IS Y++ E ++ FREM + + +A + SL++ + +
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY---GLHGQGW 439
+ S + V +L+DMYAKC E A ++F ++ + W+A+I GY GLHG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 440 EAINLYHAMRQAGVCPNDVTFIGLLTACN-----------HSGLVREGWELFHCMRGFGI 488
+ L+ MR + + + TF +L A H+ ++R G L + G G+
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLENVFSGSGL 493
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
VD+ + G + A +M VS W AL+SA
Sbjct: 494 ----------VDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISA 527
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/663 (36%), Positives = 371/663 (55%), Gaps = 9/663 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H L+ SG N L++ A K+FD +V W+A++ G+ +
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ ++ ++ M R+G+ P+ FTF LKAC L +HG ++ GF V V N
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK- 252
LV MY+KCG I A VF + DR+++SW ++I+G+ G +AL F M+ ++K
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 253 -LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVA 309
D L S+++A + G+ +HG +++ GF I SL Y KCG + A
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
R FDQ+K ++I W+++I GYA+ G EA+ LF+ + N + DS + S A
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
L+ + M K + V +++DMY KCG V+ A F KDVI W+ +I
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF-HCMRGFGI 488
GYG HG G +++ +++ M + + P++V ++ +L+AC+HSG+++EG ELF + GI
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAK 548
+PR EHY+CVVDLLGRAG L +A I M I+P V +W LLS C++H + LG+ K
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGK 506
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFH 608
L +D N +YV +SNLY + W+ + R L KGL K+ G S +EI ++ F
Sbjct: 507 ILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFR 566
Query: 609 VGDKSHPRSDEIYNEIQRLERRLK-EIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAY 667
G+ SHP + I ++ ERRL+ E+G+V + LHD++ E KEENL HSE++A+
Sbjct: 567 SGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGL 626
Query: 668 GLIS---TAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCG 724
L + G +R+ KNLR CV+CH IK +SK+ + +VRDA RFH F+DG CSCG
Sbjct: 627 ALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCG 686
Query: 725 DYW 727
DYW
Sbjct: 687 DYW 689
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 243/638 (38%), Positives = 373/638 (58%), Gaps = 4/638 (0%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
+KLV+ S G I YAR++FD S + WN++I + + +EMY LM V
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG-PDVFVQNGLVAMYAKCGNIGMARV 210
PD +T V KA ++L + + HG + G +VFV + LV MY K G A++
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
V D + ++ VV T++I GY+Q GE EA++ F M V+ + S++ + G++ D
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
+ G+ +HG ++K GFE SL Y +C V + F ++ + + W ++ISG
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
+NG E A+ FR+M+ +IKP+S T+ SA + + + + + V+K + D
Sbjct: 343 LVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRD 402
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
+ + LID+Y KCG + AR+VFD SE DVI + MI Y +G G EA++L+ M
Sbjct: 403 KYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMIN 462
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
G+ PNDVT + +L ACN+S LV EG ELF R I N+HY+C+VDLLGRAG L++
Sbjct: 463 LGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEE 522
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYAS 570
A + + I P + +W LLSACK+HR V + E +K+ ++P + G + +SNLYAS
Sbjct: 523 A-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYAS 581
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK-SHPRSDEIYNEIQRLER 629
+ W+ V ++ M++ L K+ S +EIN + F GD SHP S++I ++ L +
Sbjct: 582 TGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIK 641
Query: 630 RLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVN 689
+ K++G+V V D+ KE +L+ HSE++A+A+ + G+I RI KNLR CV+
Sbjct: 642 KSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSI-RILKNLRVCVD 700
Query: 690 CHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
CHS IK++S++++REII RD+ RFHHF+DG CSCGDYW
Sbjct: 701 CHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 172 bits (437), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 191/414 (46%), Gaps = 6/414 (1%)
Query: 27 LFLKFIKHLCSSSVLNLGHVVSLDHGL----NLDSFYASLIDNSTHKRHLDQIHNQLIVS 82
L IKH S + + ++ ++ L L S + + D S K + H ++
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK-EAQRSHGLAVIL 194
Query: 83 GLK-HNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEM 141
GL+ N F+ + LV+ G A+ + D DV L A+I GYS+ ++
Sbjct: 195 GLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKA 254
Query: 142 YGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAK 201
+ M E V P+ +T+ VL +C L D L+HG +++ GF + Q L+ MY +
Sbjct: 255 FQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLR 314
Query: 202 CGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSI 261
C + + VF + VSWTS+ISG QNG AL F +M +K + L S
Sbjct: 315 CSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSA 374
Query: 262 VRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSV 321
+R ++ E+GR +HG + K GF+ + L Y KCG +AR FD + V
Sbjct: 375 LRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDV 434
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
I N MI YA+NG EA+DLF MI ++P+ VTV S LA ++ + D
Sbjct: 435 ISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDS 494
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLH 435
K + ++D+ + G +E A ++ D+++W ++ +H
Sbjct: 495 FRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/555 (39%), Positives = 337/555 (60%), Gaps = 3/555 (0%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H V+R GF + L+ G++ AR VFD ++ + W ++ GY +N
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
E+L L+ +MR+ V+ D +V+A + D G +LH ++K GF +
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
L Y K G++ A F+ M+ ++ WNA ++ + G++ A++ F +M ++ D
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
S TV S A Q+GSL++ + + D K E +I V A +DM+ KCGN E+AR++F+
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
+++V+ WS MI+GY ++G EA+ L+ M+ G+ PN VTF+G+L+AC+H+GLV E
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNE 329
Query: 476 GWELFHCM---RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
G F M +EPR EHY+C+VDLLGR+G L++AY+FI KM +EP +WGALL
Sbjct: 330 GKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLG 389
Query: 533 ACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
AC +HR + LG+ A L P ++V LSN+YA++ WD V VR MR+ G K
Sbjct: 390 ACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKV 449
Query: 593 LGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEK 652
YS +E GK+ F+ GDKSHP+S IY ++ + ++++++G+VP T SV HD+ EEK
Sbjct: 450 AAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEK 509
Query: 653 EENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANR 712
E +L+ HSE++A+A+GLI PG +R+ KNLR C +CH+ K +S L EII+RD NR
Sbjct: 510 ECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNR 569
Query: 713 FHHFKDGLCSCGDYW 727
FHHF++G+CSC ++W
Sbjct: 570 FHHFRNGVCSCKEFW 584
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 191/378 (50%), Gaps = 10/378 (2%)
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
+S+ + L +IH ++ +G L+T+L+ +G +CYAR++FDE P +FLWN
Sbjct: 20 SSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNT 79
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
+ +GY R+ L ++ +Y MR GV PD FT+P+V+KA ++L DF +H V++YG
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
FG V LV MY K G + A +F+ + + +V+W + ++ Q G + AL FN
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M V+ D +VS++ A G + LE G ++ K + + + + KCG
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCG 259
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
AR F++MK +V+ W+ MI GYA NG + EA+ LF M ++P+ VT
Sbjct: 260 NTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLS 319
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVN------TALIDMYAKCGNVESA-RIVFDRT 417
A + G L Y S ++D + ++D+ + G +E A +
Sbjct: 320 ACSHAG---LVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
Query: 418 SEKDVIMWSAMIMGYGLH 435
E D +W A++ +H
Sbjct: 377 VEPDTGIWGALLGACAVH 394
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 272 EQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGY 331
+Q + +H +++ GF ++ LL L G + AR FD+M + +WN + GY
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
+N E++ L+++M ++PD T A +Q+G + +V K +
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
V T L+ MY K G + SA +F+ KD++ W+A + G A+ ++ M
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELF 480
V + T + +L+AC G + G E++
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 352/583 (60%), Gaps = 7/583 (1%)
Query: 144 LMRREGVDPDGFTFP-------YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLV 196
L+R D +G P +LK CT +VH +++ F D+ + N L+
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLL 102
Query: 197 AMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWI 256
MYAKCG++ AR VF+ + R V+WT++ISGY+Q+ +AL FNQM +
Sbjct: 103 NMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEF 162
Query: 257 ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM 316
L S+++A G LHG +K GF+ + +L Y + G + A+ FD +
Sbjct: 163 TLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL 222
Query: 317 KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
++ + + WNA+I+G+A+ E+A++LF+ M+ +P + S A + G L+ +
Sbjct: 223 ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK 282
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHG 436
W+ Y+ KS F L+DMYAK G++ AR +FDR +++DV+ W++++ Y HG
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHG 342
Query: 437 QGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYS 496
G EA+ + MR+ G+ PN+++F+ +LTAC+HSGL+ EGW + M+ GI P HY
Sbjct: 343 FGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYV 402
Query: 497 CVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPY 556
VVDLLGRAG L++A FI +M IEP ++W ALL+AC++H++ LG YAA+ +F LDP
Sbjct: 403 TVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD 462
Query: 557 NTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPR 616
+ G +V L N+YAS W+ A VR M+E G+ K+ S +EI + +F D+ HP+
Sbjct: 463 DPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQ 522
Query: 617 SDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGT 676
+EI + + + ++KE+G+VP T V+ ++ +E+E NL HSE+IA+A+ L++T PG+
Sbjct: 523 REEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS 582
Query: 677 ILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDG 719
+ I KN+R C +CH+ IKL SK+V REIIVRD NRFHHFKD
Sbjct: 583 TIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 186/384 (48%), Gaps = 8/384 (2%)
Query: 58 FYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF 114
FY +L+ T + L Q +H ++ S +H+ + L+N + G + ARK+F++
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 115 SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC 174
D W +I GYS+ + + + + M R G P+ FT V+KA + R C
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAA--ERRGCC 179
Query: 175 --LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQ 232
+HG ++ GF +V V + L+ +Y + G + A++VFD L R VSW ++I+G+A+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
+AL LF M + + S+ A LEQG+ +H +IK G +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
+L YAK G + AR FD++ V+ WN++++ YA++G +EAV F EM I
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-R 411
+P+ ++ S A + G L + + K + + ++D+ + G++ A R
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLH 435
+ + E +W A++ +H
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMH 443
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/623 (37%), Positives = 369/623 (59%), Gaps = 3/623 (0%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
AR++FDE D +N +I GY + + ++ M+ L + PD T VL+AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGH 319
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
L D L+ ++ +++ GF + V+N L+ +YAKCG++ AR VF+ + + VSW SI
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
ISGY Q+G+ +EA++LF M + + D I + ++ + DL+ G+ LH IK G
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
+ + +L YAKCG+V + F M T + WN +IS + G + + +
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN 406
M + PD T A + + +L + + + + Y S++ + ALI+MY+KCG
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 407 VESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
+E++ VF+R S +DV+ W+ MI YG++G+G +A+ + M ++G+ P+ V FI ++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 467 CNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVS 525
C+HSGLV EG F M+ + I+P EHY+CVVDLL R+ + +A +FI M I+P S
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 526 VWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMR 585
+W ++L AC+ + E ++++ L+P + G+ + SN YA+ R WD V+ +R ++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 586 EKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLH 645
+K ++K+ GYS IE+ + VF GD S P+S+ IY ++ L + + G++P V
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQ 799
Query: 646 DLNYEEKEENLNI-HSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVERE 704
+L EE++ L HSER+A+A+GL++T PGT L++ KNLR C +CH V KLISK+V RE
Sbjct: 800 NLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGRE 859
Query: 705 IIVRDANRFHHFKDGLCSCGDYW 727
I+VRDANRFH FKDG CSC D W
Sbjct: 860 ILVRDANRFHLFKDGTCSCKDRW 882
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 261/491 (53%), Gaps = 8/491 (1%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHP 117
F + + +S++ L +IH +I GL + F KL++ S+ + +F S
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 118 -DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
+V+LWN+IIR +S++ LF +E YG +R V PD +TFP V+KAC L D + LV
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
+ Q++ GF D+FV N LV MY++ G + AR VFD + R +VSW S+ISGY+ +G
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYY 188
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
EAL ++++++N+ + D + S++ A+G++ ++QG+ LHG +K G + L
Sbjct: 189 EEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
A Y K + AR FD+M + +N MI GY K EE+V +F E + + KPD
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDL 307
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
+TV S A + L LA+++ +Y+ K+ + + V LID+YAKCG++ +AR VF+
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
KD + W+++I GY G EA+ L+ M + +T++ L++ ++ G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 477 WELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
L GI + ++D+ + G + + M V+ W ++SAC
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVT-WNTVISAC-- 484
Query: 537 HRHVTLGEYAA 547
V G++A
Sbjct: 485 ---VRFGDFAT 492
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 9/326 (2%)
Query: 54 NLDSFYASLIDNST------HKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
NLD F L+ S+ H R L I+N ++ +G + L++ + G +
Sbjct: 299 NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDM 358
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
AR +F+ D WN+II GY +S ++++ +M D T+ ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
T L D + +H I+ G D+ V N L+ MYAKCG +G + +F + V+W
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++IS + G+ L++ QMR ++V D + + + G+ +H C+++
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G+E E + +L Y+KCG + + F++M V+ W MI Y G E+A++ F
Sbjct: 539 GYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETF 598
Query: 345 REMITRNIKPDSVTVRSAALASAQVG 370
+M I PDSV + A + G
Sbjct: 599 ADMEKSGIVPDSVVFIAIIYACSHSG 624
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 59 YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y LI ST L +H+ I SG+ + + L++ + G + + K+F
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG 470
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
D WN +I R F +++ MR+ V PD TF L C L RL
Sbjct: 471 TGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKE 530
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H ++R+G+ ++ + N L+ MY+KCG + + VF+ ++ R VV+WT +I Y GE
Sbjct: 531 IHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
+AL F M + + D + ++I+ A +++G + C KM + D +I
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLA---CFEKMKTHYKIDPMIE 647
Query: 296 ----LTAFYAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
+ ++ ++ A F M +W +++ +G E A + R +I
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 351 NIKPD 355
N PD
Sbjct: 708 N--PD 710
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/723 (34%), Positives = 376/723 (52%), Gaps = 63/723 (8%)
Query: 68 HKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF------- 120
R++ IH +I + FL +V+ + + YAR++FD P++F
Sbjct: 21 QSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLL 80
Query: 121 ------------------------LWNAIIRGYSRSNLFRNTIEMYGLMRRE-GVDPDGF 155
WN +I GYS S L ++ Y M R+ +
Sbjct: 81 AYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV 140
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL 215
T +LK + L +HGQVI+ GF + V + L+ MYA G I A+ VF GL
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 216 NDRTVV------------------------------SWTSIISGYAQNGEALEALRLFNQ 245
+DR V SW ++I G AQNG A EA+ F +
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 246 MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
M+ +K+D S++ A G + + +G+ +H CII+ F+D + +L Y KC
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ A++ FD+MK +V+ W AM+ GY + G AEEAV +F +M I PD T+ A A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMW 425
A V SL+ S + V+ +L+ +Y KCG+++ + +F+ + +D + W
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 426 SAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG 485
+AM+ Y G+ E I L+ M Q G+ P+ VT G+++AC+ +GLV +G F M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 486 -FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGE 544
+GI P HYSC++DL R+G L++A FI M P W LLSAC+ ++ +G+
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 545 YAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKL 604
+AA+ L LDP++ Y LS++YAS WD VA +R MREK + K+ G S I+ GKL
Sbjct: 561 WAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKL 620
Query: 605 QVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIA 664
F D+S P D+IY +++ L ++ + G+ P T V HD+ K + LN HSER+A
Sbjct: 621 HSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLA 680
Query: 665 VAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCG 724
+A+GLI G +R+ KNLR CV+CH+ K IS + REI+VRDA RFH FKDG CSCG
Sbjct: 681 IAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCG 740
Query: 725 DYW 727
D+W
Sbjct: 741 DFW 743
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/573 (41%), Positives = 349/573 (60%), Gaps = 49/573 (8%)
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGE--ALEALRLFNQMRNTD-VKLDWIALVS 260
++ A +F+ + R SW +II G++++ E AL A+ LF +M + + V+ + S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG---------------- 304
+++A +++G+ +HG +K GF + ++ +L Y CG
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 305 -------------QVIV----------------ARSFFDQMKTSSVIMWNAMISGYAKNG 335
++++ AR FD+M+ SV+ WN MISGY+ NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
++AV++FREM +I+P+ VT+ S A +++GSL+L +W+ Y S D + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
ALIDMY+KCG +E A VF+R ++VI WSAMI G+ +HGQ +AI+ + MRQAGV P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
+DV +I LLTAC+H GLV EG F M G+EPR EHY C+VDLLGR+G LD+A +F
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 515 IMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLW 574
I+ M I+P +W ALL AC++ +V +G+ A L + P+++G YV LSN+YAS W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 575 DHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEI 634
V+ +R+ M+EK + KD G S+I+I+G L F V D SHP++ EI + + + +L+
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLA 553
Query: 635 GFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVI 694
G+ P T VL +L E+KE L+ HSE+IA A+GLIST+PG +RI KNLR C +CHS I
Sbjct: 554 GYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSI 613
Query: 695 KLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KLISK+ +R+I VRD RFHHF+DG CSC DYW
Sbjct: 614 KLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 204/428 (47%), Gaps = 54/428 (12%)
Query: 63 IDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVN--GSSNLGH--ICYARKLFDEFSHPD 118
I+N R L QIH I SG + +++ +S+L H + YA K+F++ +
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 119 VFLWNAIIRGYSRSNLFRNTIEM---YGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
F WN IIRG+S S+ + I + Y +M E V+P+ FTFP VLKAC + +
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCG-------------------------------- 203
+HG ++YGFG D FV + LV MY CG
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 204 -------------NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
+ AR++FD + R+VVSW ++ISGY+ NG +A+ +F +M+ D
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
++ +++ LVS++ A + LE G LH G + L +L Y+KCG + A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
F+++ +VI W+AMI+G+A +G A +A+D F +M ++P V + A + G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 371 SLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAM 428
++ ++ VS I ++D+ + G ++ A + + + D ++W A+
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 429 IMGYGLHG 436
+ + G
Sbjct: 450 LGACRMQG 457
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/652 (37%), Positives = 367/652 (56%), Gaps = 2/652 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
++H ++ G + + ++ L+ G + AR LFD D+ WNA+I GY +
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ +E++ MR VDPD T V+ AC L D RL +H VI GF D+ V N
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L MY G+ A +F + + +VSWT++ISGY N +A+ + M VK
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKP 396
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D I + +++ A + DL+ G LH IK + +L Y+KC + A F
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIF 456
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+ +VI W ++I+G N EA+ R+M ++P+++T+ +A A A++G+L
Sbjct: 457 HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALM 515
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + +V ++ D F+ AL+DMY +CG + +A F+ + +KDV W+ ++ GY
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYS 574
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
GQG + L+ M ++ V P+++TFI LL C+ S +VR+G F M +G+ P +
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL 553
HY+CVVDLLGRAG L +A+ FI KM + P +VWGALL+AC+IH + LGE +A+ +F L
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFEL 694
Query: 554 DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKS 613
D + G+Y+ L NLYA W VA VR +M+E GL+ D G S +E+ GK+ F DK
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKY 754
Query: 614 HPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTA 673
HP++ EI ++ ++ E+G +ES D ++E HSER A+A+GLI+T
Sbjct: 755 HPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTV 814
Query: 674 PGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGD 725
PG + +TKNL C NCH +K ISK V REI VRDA FHHFKDG CSCGD
Sbjct: 815 PGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 219 bits (558), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 226/436 (51%), Gaps = 8/436 (1%)
Query: 101 LGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY-GLMRREGVDPDGFTFPY 159
G++ A +F + S ++F WN ++ GY++ F + +Y ++ GV PD +TFP
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
VL+ C + D VH V+RYG+ D+ V N L+ MY KCG++ AR++FD + R
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
++SW ++ISGY +NG E L LF MR V D + L S++ A + D GR +H
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
+I GF + + SLT Y G A F +M+ ++ W MISGY N ++
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
A+D +R M ++KPD +TV + A A +G L + K+ S + V LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
MY+KC ++ A +F K+VI W+++I G L+ + +EA+ M+ + PN +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAIT 500
Query: 460 FIGLLTACNHSGLVREGWELF-HCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
L AC G + G E+ H +R G G++ + + ++D+ R G ++ A+
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLD--DFLPNALLDMYVRCGRMNTAWSQF-- 556
Query: 518 MSIEPGVSVWGALLSA 533
S + V+ W LL+
Sbjct: 557 NSQKKDVTSWNILLTG 572
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 184/350 (52%), Gaps = 10/350 (2%)
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT-DV 251
N +AM+ + GN+ A VF +++R + SW ++ GYA+ G EA+ L+++M V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
K D ++R G + DL +G+ +H +++ G+E + D++ +L Y KCG V AR
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
FD+M +I WNAMISGY +NG E ++LF M ++ PD +T+ S A +G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
+L + + YV + +A DI V +L MY G+ A +F R KD++ W+ MI G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
Y + +AI+ Y M Q V P+++T +L+AC G + G EL I+ R
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK----LAIKAR 428
Query: 492 NEHYSCV----VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
Y V +++ + +D+A D + + +S W ++++ +++
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLN 477
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 3/266 (1%)
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
+ G NG+ EA++L N M+ V +D V++VR E+G ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
+L + A + + G ++ A F +M ++ WN ++ GYAK G+ +EA+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 347 MI-TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
M+ +KPD T + L + + +V + Y DI V ALI MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 406 NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
+V+SAR++FDR +D+I W+AMI GY +G E + L+ AMR V P+ +T +++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 466 ACNHSGLVREGWEL--FHCMRGFGIE 489
AC G R G ++ + GF ++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVD 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 32/245 (13%)
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
+ G NG EEA+ L M +R A V ++L +W S+
Sbjct: 66 LHGLCANGKLEEAMKLLNSM---------QELRVAVDEDVFVALVRLCEWKRAQEEGSKV 116
Query: 388 AS---------DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
S + + A + M+ + GN+ A VF + SE+++ W+ ++ GY G
Sbjct: 117 YSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYF 176
Query: 439 WEAINLYHAMRQ-AGVCPNDVTFIGLLTACNHSGLVREGWEL-FHCMRGFGIEPRNEHYS 496
EA+ LYH M GV P+ TF +L C + G E+ H +R +G E + +
Sbjct: 177 DEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVN 235
Query: 497 CVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA------CKIHRHVTLGEYAAKKL 550
++ + + G + A +M +S W A++S C H L + A +
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIIS-WNAMISGYFENGMC----HEGLELFFAMRG 290
Query: 551 FSLDP 555
S+DP
Sbjct: 291 LSVDP 295
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/664 (37%), Positives = 379/664 (57%), Gaps = 12/664 (1%)
Query: 74 QIHNQLIVSGLKHNGFLI---TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
++H +I +GL F++ LVN + G I AR++F + D WN++I G
Sbjct: 334 EVHGHVITTGLVD--FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
++ F +E Y MRR + P FT L +C L +L +HG+ ++ G +V
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL-EALRLFNQMRNT 249
V N L+ +YA+ G + R +F + + VSW SII A++ +L EA+ F +
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
KL+ I S++ A + E G+ +HG +K DE +L A Y KCG++
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 310 RSFFDQM-KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
F +M + + WN+MISGY N +A+DL M+ + DS + A A
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
V +L+ + ++ SD+ V +AL+DMY+KCG ++ A F+ ++ W++M
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPND-VTFIGLLTACNHSGLVREGWELFHCMR-GF 486
I GY HGQG EA+ L+ M+ G P D VTF+G+L+AC+H+GL+ EG++ F M +
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC--KIHRHVTLGE 544
G+ PR EH+SC+ D+LGRAG LD+ DFI KM ++P V +W +L AC R LG+
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGK 811
Query: 545 YAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKL 604
AA+ LF L+P N +YV L N+YA+ W+ + R M++ + K+ GYS + + +
Sbjct: 812 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGV 871
Query: 605 QVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIA 664
+F GDKSHP +D IY +++ L R++++ G+VP T L+DL E KEE L+ HSE++A
Sbjct: 872 HMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLA 931
Query: 665 VAYGLISTAPGTI-LRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSC 723
VA+ L + T+ +RI KNLR C +CHS K ISK+ R+II+RD+NRFHHF+DG CSC
Sbjct: 932 VAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSC 991
Query: 724 GDYW 727
D+W
Sbjct: 992 SDFW 995
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 221/472 (46%), Gaps = 17/472 (3%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
H++L + L + +L L+N G ARK+FDE + W I+ GYSR+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL--LDFRLSCLVHGQVIRYGFGPDVFVQ 192
+ + M +EG+ + + F VL+AC E+ + +HG + + + D V
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 193 NGLVAMYAKC-GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM----- 246
N L++MY KC G++G A F + + VSW SIIS Y+Q G+ A R+F+ M
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQV 306
R T+ + + DV LEQ + I K G + + L + +AK G +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALA 365
AR F+QM+T + + N ++ G + EEA LF +M + ++ P+S + ++
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 366 ----SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+ +VG K + ++ + + L++MYAKCG++ AR VF ++KD
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
+ W++MI G +G EA+ Y +MR+ + P T I L++C + G ++
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHG 439
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
GI+ + ++ L GYL++ M VS W +++ A
Sbjct: 440 ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 224/489 (45%), Gaps = 17/489 (3%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R L+QI + SGL + F+ + LV+ + G + YARK+F++ + N ++ G
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 130 SRSNLFRNTIEMYGLMRRE-GVDPDGF-----TFP-YVLKACTELLDFRLSCLVHGQVIR 182
R +++ M V P+ + +FP Y L E + + VHG VI
Sbjct: 285 VRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL---AEEVGLKKGREVHGHVIT 341
Query: 183 YGFGP-DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
G V + NGLV MYAKCG+I AR VF + D+ VSW S+I+G QNG +EA+
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVE 401
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
+ MR D+ L+S + + + + G+ +HG +K+G + + +L YA
Sbjct: 402 RYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA-EEAVDLFREMITRNIKPDSVTVR 360
+ G + R F M + WN++I A++ + EAV F K + +T
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFS 521
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE- 419
S A + + +L + + K+ A + ALI Y KCG ++ +F R +E
Sbjct: 522 SVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+D + W++MI GY + +A++L M Q G + + +L+A + G E+
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH 539
C +E S +VD+ + G LD A F M + S W +++S H
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS-WNSMISGYARHGQ 700
Query: 540 VTLGEYAAK 548
GE A K
Sbjct: 701 ---GEEALK 706
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
R H + K + + L +L Y + G + AR FD+M + + W ++SGY++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL--AQWMDDYVSKSEYASDI 391
NG +EA+ R+M+ I + S A ++GS+ + + + + K YA D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 392 FVNTALIDMYAKC-GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
V+ LI MY KC G+V A F K+ + W+++I Y G A ++ +M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 451 AGVCPNDVTFIGLL-TACN 468
G P + TF L+ TAC+
Sbjct: 200 DGSRPTEYTFGSLVTTACS 218
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%)
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
VG A++ + K+ D+++ LI+ Y + G+ SAR VFD ++ + W+ +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
+ GY +G+ EA+ M + G+ N F+ +L AC G V
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 339/552 (61%), Gaps = 1/552 (0%)
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
HG++IR DV + N L+ Y+KCG + +AR VFDG+ +R++VSW ++I Y +N
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
EAL +F +MRN K + S++ A G D + + LH +K + + +L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
YAKCG + A F+ M+ S + W++M++GY +N + EEA+ L+R +++ +
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ S A + + +L + M + KS + S++FV ++ +DMYAKCG++ + I+F
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
EK++ +W+ +I G+ H + E + L+ M+Q G+ PN+VTF LL+ C H+GLV EG
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEG 383
Query: 477 WELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACK 535
F MR +G+ P HYSC+VD+LGRAG L +AY+ I + +P S+WG+LL++C+
Sbjct: 384 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCR 443
Query: 536 IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGY 595
+++++ L E AA+KLF L+P N G++V LSN+YA+++ W+ +A R L+R+ + K G
Sbjct: 444 VYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGK 503
Query: 596 SVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEEN 655
S I+I K+ F VG+ HPR EI + + L + ++ G+ P E LHD+ +KEE
Sbjct: 504 SWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEEL 563
Query: 656 LNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHH 715
L HSE++A+ +GL+ + +RI KNLR CV+CH +K S R IIVRD NRFHH
Sbjct: 564 LMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHH 623
Query: 716 FKDGLCSCGDYW 727
F DG CSCGD+W
Sbjct: 624 FSDGHCSCGDFW 635
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 149/286 (52%)
Query: 76 HNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLF 135
H ++I L+ + L+ L+N S G + AR++FD + WN +I Y+R+ +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 136 RNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGL 195
++++ MR EG FT VL AC D +H ++ +++V L
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 196 VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
+ +YAKCG I A VF+ + D++ V+W+S+++GY QN EAL L+ + + ++ +
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
L S++ A ++ L +G+ +H I K GF + S YAKCG + + F +
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
++ ++ +WN +ISG+AK+ +E + LF +M + P+ VT S
Sbjct: 324 VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 7/268 (2%)
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
+ ++ HG II++ E + LL L Y+KCG V +AR FD M S++ WN MI Y
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYT 138
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL-AQWMDDYVSKSEYASDI 391
+N EA+D+F EM K T+ S+ L++ V L + + K+ ++
Sbjct: 139 RNRMESEALDIFLEMRNEGFKFSEFTI-SSVLSACGVNCDALECKKLHCLSVKTCIDLNL 197
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
+V TAL+D+YAKCG ++ A VF+ +K + WS+M+ GY + EA+ LY ++
Sbjct: 198 YVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRM 257
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFH--CMRGFGIEPRNEHYSCVVDLLGRAGYLD 509
+ N T ++ AC++ + EG ++ C GFG S VD+ + G L
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA--SSAVDMYAKCGSLR 315
Query: 510 QAYDFIMKMSIEPGVSVWGALLSACKIH 537
++Y I E + +W ++S H
Sbjct: 316 ESY-IIFSEVQEKNLELWNTIISGFAKH 342
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 105/202 (51%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
++H + + + N ++ T L++ + G I A ++F+ W++++ GY ++
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + +Y +R ++ + FT V+ AC+ L +H + + GFG +VFV +
Sbjct: 243 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVAS 302
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
V MYAKCG++ + ++F + ++ + W +IISG+A++ E + LF +M+ +
Sbjct: 303 SAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 362
Query: 254 DWIALVSIVRAYGDVDDLEQGR 275
+ + S++ G +E+GR
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGR 384
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
A+ G++ A+ + + + D+ + LI+ Y+KCG VE AR VFD E+ ++ W+
Sbjct: 72 ARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWN 131
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
MI Y + EA++++ MR G ++ T +L+AC + E +L HC+
Sbjct: 132 TMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL-HCLSVK 190
Query: 487 GIEPRNEHY-SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
N + + ++DL + G + A M + V+ W ++++
Sbjct: 191 TCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 350/588 (59%), Gaps = 36/588 (6%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGN---IGMARVVFDGLNDRTVVSWTSIISGYAQ 232
+H ++++ G D + ++ + + A++VFDG + W +I G++
Sbjct: 33 IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSC 92
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED---- 288
+ E +L L+ +M + + S+++A ++ E+ +H I K+G+E+
Sbjct: 93 SDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYA 152
Query: 289 -------------------------EPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSV 321
EPD + S+ Y K G++ +A + F +M +
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
I W MISGY + +EA+ LF EM +++PD+V++ +A A AQ+G+L+ +W+ Y
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
++K+ D + LIDMYAKCG +E A VF +K V W+A+I GY HG G EA
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVD 500
I+ + M++ G+ PN +TF +LTAC+++GLV EG +F+ M R + ++P EHY C+VD
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 501 LLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
LLGRAG LD+A FI +M ++P +WGALL AC+IH+++ LGE + L ++DPY+ G
Sbjct: 393 LLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGR 452
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
YV +N++A + WD A R LM+E+G++K G S I + G F GD+SHP ++I
Sbjct: 453 YVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Query: 621 YNEIQRLERRLKEIGFVPHTESVLHDL-NYEEKEENLNIHSERIAVAYGLISTAPGTILR 679
++ + + R+L+E G+VP E +L DL + +E+E ++ HSE++A+ YGLI T PGTI+R
Sbjct: 513 QSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIR 572
Query: 680 ITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
I KNLR C +CH V KLISK+ +R+I++RD RFHHF+DG CSCGDYW
Sbjct: 573 IMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 221/448 (49%), Gaps = 50/448 (11%)
Query: 48 SLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVN---GSSNLGHI 104
SL+H L S + + + L QIH +++ +GL + + ITK ++ S++ +
Sbjct: 9 SLEHNLYET---MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFL 65
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
YA+ +FD F PD FLWN +IRG+S S+ ++ +Y M + +TFP +LKAC
Sbjct: 66 PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC 125
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD----------- 213
+ L F + +H Q+ + G+ DV+ N L+ YA GN +A ++FD
Sbjct: 126 SNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWN 185
Query: 214 --------------------GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
+ ++ +SWT++ISGY Q EAL+LF++M+N+DV+
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D ++L + + A + LEQG+ +H + K + L L YAKCG++ A F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+K SV W A+ISGYA +GH EA+ F EM IKP+ +T + A + G ++
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 374 LAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNV-ESARIVFDRTSEKDVIMWSAMIM 430
+ + Y + +Y + ++D+ + G + E+ R + + + + ++W A++
Sbjct: 366 EGKLI-FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 431 GYGLH---------GQGWEAINLYHAMR 449
+H G+ AI+ YH R
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGR 452
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 349/583 (59%), Gaps = 7/583 (1%)
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVV 211
P T+ ++ C + VH ++ G D F+ L+ MY+ G++ AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 212 FDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA----YGD 267
FD RT+ W ++ G E L L+ +M V+ D +++A
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
V+ L +G+ +H + + G+ ++ +L YA+ G V A F M +V+ W+AM
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 328 ISGYAKNGHAEEAVDLFREMI--TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
I+ YAKNG A EA+ FREM+ T++ P+SVT+ S A A + +L+ + + Y+ +
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 386 EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
S + V +AL+ MY +CG +E + VFDR ++DV+ W+++I YG+HG G +AI ++
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 446 HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGR 504
M G P VTF+ +L AC+H GLV EG LF M R GI+P+ EHY+C+VDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
A LD+A + M EPG VWG+LL +C+IH +V L E A+++LF+L+P N G+YV L
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
+++YA +++WD V V+ L+ +GL K G +E+ K+ F D+ +P ++I+ +
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Query: 625 QRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNL 684
+L +KE G++P T+ VL++L EEKE + HSE++A+A+GLI+T+ G +RITKNL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 685 RACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
R C +CH K ISK +E+EI+VRD NRFH FK+G+CSCGDYW
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 206 bits (525), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 213/423 (50%), Gaps = 21/423 (4%)
Query: 30 KFIKHLCSSSVLNLGHVVSLDHGLNLDSFYASLIDNSTHKRHLD---QIHNQLIVSGLKH 86
+ I+ LC L V Y LI H+ L ++H ++ +G
Sbjct: 51 QLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQ 110
Query: 87 NGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
+ FL TKL+ S+LG + YARK+FD+ +++WNA+ R + + + +Y M
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 147 REGVDPDGFTFPYVLKACT----ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
R GV+ D FT+ YVLKAC + +H + R G+ V++ LV MYA+
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM--RNTDVKLDWIALVS 260
G + A VF G+ R VVSW+++I+ YA+NG+A EALR F +M D + + +VS
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
+++A + LEQG+ +HG I++ G + ++ +L Y +CG++ V + FD+M
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ---- 376
V+ WN++IS Y +G+ ++A+ +F EM+ P VT S A + G ++ +
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 377 --WMDDYVSKSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSEKDVIMWSAMIMGYG 433
W D + I ++D+ + + E+A++V D +E +W +++
Sbjct: 411 TMWRDHGIK-----PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 434 LHG 436
+HG
Sbjct: 466 IHG 468
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 16/217 (7%)
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
N +I K G ++A+ ++++ P T L SL A + ++
Sbjct: 50 NQLIQSLCKEGKLKQAI----RVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ D F+ T LI MY+ G+V+ AR VFD+T ++ + +W+A+ L G G E + L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 445 YHAMRQAGVCPNDVTFIGLLTAC-------NHSGLVREGWELFHCMRGFGIEPRNEHYSC 497
Y M + GV + T+ +L AC NH + +G E+ + G +
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNH---LMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
+VD+ R G +D A M + VS W A++ AC
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVS-WSAMI-AC 257
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/584 (39%), Positives = 348/584 (59%), Gaps = 6/584 (1%)
Query: 145 MRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGN 204
++ G+ D T+ ++K C L+ + G P +F+ N L+ MY K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 205 IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
+ A +FD + R V+SWT++IS Y++ +AL L M +V+ + S++R+
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
+ D+ R LH IIK G E + + +L +AK G+ A S FD+M T I+W
Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
N++I G+A+N ++ A++LF+ M + T+ S A + L+L M +V
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG--MQAHVHI 286
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+Y D+ +N AL+DMY KCG++E A VF++ E+DVI WS MI G +G EA+ L
Sbjct: 287 VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLG 503
+ M+ +G PN +T +G+L AC+H+GL+ +GW F M+ +GI+P EHY C++DLLG
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
+AG LD A + +M EP W LL AC++ R++ L EYAAKK+ +LDP + G Y
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
LSN+YA+S+ WD V +R MR++G+ K+ G S IE+N ++ F +GD SHP+ E+ +
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 624 IQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKN 683
+ +L RL IG+VP T VL DL E+ E++L HSE++A+A+GL++ ++RI KN
Sbjct: 527 LNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKN 586
Query: 684 LRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
LR C +CH KL SKL R I++RD R+HHF+DG CSCGDYW
Sbjct: 587 LRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 193/388 (49%), Gaps = 17/388 (4%)
Query: 51 HGLNLDS-FYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICY 106
HGL DS Y+ LI R + + I L +G + FL+ L+N +
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A +LFD+ +V W +I YS+ + + +E+ LM R+ V P+ +T+ VL++C
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
+ D R ++H +I+ G DVFV++ L+ ++AK G A VFD + + W SI
Sbjct: 175 MSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
I G+AQN + AL LF +M+ + L S++RA + LE G H I+K
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY-- 289
Query: 287 EDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
+ DL++ +L Y KCG + A F+QMK VI W+ MISG A+NG+++EA+ LF
Sbjct: 290 --DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLF 347
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN--TALIDMYA 402
M + KP+ +T+ A + G L+ W K Y D +ID+
Sbjct: 348 ERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 403 KCGNVESA-RIVFDRTSEKDVIMWSAMI 429
K G ++ A +++ + E D + W ++
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 253/651 (38%), Positives = 364/651 (55%), Gaps = 12/651 (1%)
Query: 87 NGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
N F +V + I AR+LFDE PD +N +I GY+ + + ++ MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
+ G + DGFT ++ AC + +D L +H + GF V N V Y+K G +
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVD--LIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 207 MARVVFDGLND-RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
A VF G+++ R VSW S+I Y Q+ E +AL L+ +M K+D L S++ A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ---VIVARSFFDQMKTSSVI 322
+D L GR HG +IK GF + L FY+KCG + + F ++ + ++
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLV 310
Query: 323 MWNAMISGYAKNGH-AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+WN MISGY+ N +EEAV FR+M +PD + A + + S + +
Sbjct: 311 VWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGL 370
Query: 382 VSKSEYASD-IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
KS S+ I VN ALI +Y K GN++ AR VFDR E + + ++ MI GY HG G E
Sbjct: 371 AIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVV 499
A+ LY M +G+ PN +TF+ +L+AC H G V EG E F+ M+ F IEP EHYSC++
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMI 490
Query: 500 DLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTG 559
DLLGRAG L++A FI M +PG W ALL AC+ H+++ L E AA +L + P
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAAT 550
Query: 560 HYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDE 619
YV L+N+YA +R W+ +A VR MR K + K G S IE+ K VF D SHP E
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 620 IYNEIQRLERRLKEIGFVPHTESVL---HDLNYEEKEENLNIHSERIAVAYGLISTAPGT 676
+ ++ + +++K++G+V + + + ++E L HSE++AVA+GL+ST G
Sbjct: 611 VNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGE 670
Query: 677 ILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
L + KNLR C +CH+ IK +S + REIIVRD RFH FKDG CSCGDYW
Sbjct: 671 ELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 146/288 (50%), Gaps = 7/288 (2%)
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
P+VF N +V YAK I +AR +FD + VS+ ++ISGYA E A+ LF +M
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQV 306
R ++D L ++ A D DL + LH + GF+ + + +Y+K G +
Sbjct: 132 RKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 307 IVARSFFDQM-KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
A S F M + + WN+MI Y ++ +A+ L++EMI + K D T+ S A
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES---ARIVFDRTSEKDV 422
+ L + + K+ + + V + LID Y+KCG + + VF D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 423 IMWSAMIMGYGLHGQ-GWEAINLYHAMRQAGVCPNDVTFIGLLTACNH 469
++W+ MI GY ++ + EA+ + M++ G P+D +F+ + +AC++
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/642 (36%), Positives = 356/642 (55%), Gaps = 3/642 (0%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
FL L+N S L H AR + +V W ++I G +++ F + + MRRE
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
GV P+ FTFP KA L +H ++ G DVFV MY K A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 209 RVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDV 268
R +FD + +R + +W + IS +G EA+ F + R D + I + + A D
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
L G LHG +++ GF+ + + L FY KC Q+ + F +M T + + W +++
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
+ Y +N E+A L+ ++ + S A A + L+L + + + K+
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
IFV +AL+DMY KCG +E + FD EK+++ +++I GY GQ A+ L+ M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 449 --RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRA 505
R G PN +TF+ LL+AC+ +G V G ++F MR +GIEP EHYSC+VD+LGRA
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 506 GYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLS 565
G +++AY+FI KM I+P +SVWGAL +AC++H LG AA+ LF LDP ++G++V LS
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522
Query: 566 NLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ 625
N +A++ W VR ++ G+ K GYS I + ++ F D+SH + EI +
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLA 582
Query: 626 RLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLR 685
+L ++ G+ P + L+DL EEK ++ HSE++A+A+GL+S +RITKNLR
Sbjct: 583 KLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLR 642
Query: 686 ACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
C +CHS K +S V+REIIVRD NRFH FKDG+CSC DYW
Sbjct: 643 ICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 19/423 (4%)
Query: 160 VLKACTELLDFRLSCLVHGQVIR-YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
+LK RL +VH ++++ P F+ N L+ MY+K + AR+V R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
VVSWTS+ISG AQNG AL F +MR V + +A + G+ +H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIV--ARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+K G D+ + +AF C + AR FD++ ++ WNA IS +G
Sbjct: 132 ALAVKCG--RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 189
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
EA++ F E + P+S+T + A + L L + V +S + +D+ V
Sbjct: 190 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 249
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
LID Y KC + S+ I+F K+ + W +++ Y + + +A LY R+ V +
Sbjct: 250 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 309
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY----SCVVDLLGRAGYL---D 509
D +L+AC +G+ G EL + ++ E S +VD+ G+ G + +
Sbjct: 310 DFMISSVLSAC--AGMA--GLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSE 365
Query: 510 QAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
QA+D + + ++ S+ G ++ + L E A + P N +V L L A
Sbjct: 366 QAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP-NYMTFVSL--LSA 422
Query: 570 SSR 572
SR
Sbjct: 423 CSR 425
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 8/280 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++ SG + + L++ I + +F E + W +++ Y +++
Sbjct: 230 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+Y R++ V+ F VL AC + L +H ++ +FV +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM--RNTDV 251
LV MY KCG I + FD + ++ +V+ S+I GYA G+ AL LF +M R
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM-GFEDEPDLLISLTAFYAKCGQVIVAR 310
+++ VS++ A +E G + + G E + + + G V A
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Query: 311 SFFDQMKTSSVI-MWNAMISGYAKNGHAE----EAVDLFR 345
F +M I +W A+ + +G + A +LF+
Sbjct: 470 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 509
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/663 (37%), Positives = 371/663 (55%), Gaps = 41/663 (6%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM-RREGVDP 152
+V+G + G AR+LFDE S +V WN ++ GY ++ + ++ LM R V
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 153 DGFTFPYVLKAC---TELLDFRLS-------CLVHGQVIR----------YGFGP--DVF 190
Y+ + E L +R+ ++ G +I Y P DV
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVV 173
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
++ + G + AR++FD + +R VV+WT++I+GY QN A +LF M
Sbjct: 174 ASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK- 232
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP-DLLISLTAF---YAKCGQV 306
++ W +++ G ++D E+ FE P +I+ A + + G++
Sbjct: 233 TEVSWTSMLLGYTLSGRIEDAEEF-----------FEVMPMKPVIACNAMIVGFGEVGEI 281
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
AR FD M+ W MI Y + G EA+DLF +M + ++P ++ S
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
A + SL+ + + ++ + ++ D++V + L+ MY KCG + A++VFDR S KD+IMW+
Sbjct: 342 ATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWN 401
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG- 485
++I GY HG G EA+ ++H M +G PN VT I +LTAC+++G + EG E+F M
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Query: 486 FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEY 545
F + P EHYSC VD+LGRAG +D+A + I M+I+P +VWGALL ACK H + L E
Sbjct: 462 FCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEV 521
Query: 546 AAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQ 605
AAKKLF +P N G YV LS++ AS W VA VR MR +SK G S IE+ K+
Sbjct: 522 AAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVH 581
Query: 606 VFHVGD-KSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIA 664
+F G K+HP I +++ + L+E G+ P VLHD++ EEK ++L+ HSER+A
Sbjct: 582 MFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLA 641
Query: 665 VAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCG 724
VAYGL+ G +R+ KNLR C +CH+ IKLISK+ EREII+RDANRFHHF +G CSC
Sbjct: 642 VAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCR 701
Query: 725 DYW 727
DYW
Sbjct: 702 DYW 704
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 14/350 (4%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
T ++ G G + AR +FDE +V W +I GY ++N +++ +M
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------ 229
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP--DVFVQNGLVAMYAKCGNIGMAR 209
P+ + + LL + LS + + P V N ++ + + G I AR
Sbjct: 230 PEKTEVSWT----SMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKAR 285
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
VFD + DR +W +I Y + G LEAL LF QM+ V+ + +L+SI+ +
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
L+ GR +H +++ F+D+ + L Y KCG+++ A+ FD+ + +IMWN++IS
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYA 388
GYA +G EEA+ +F EM + P+ VT+ + A + G L+ + + SK
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVT 465
Query: 389 SDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
+ + +DM + G V+ A ++ T + D +W A++ H +
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 188/474 (39%), Gaps = 109/474 (22%)
Query: 196 VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
++ ++ G I AR FD L + + SW SI+SGY NG EA +LF++M +V + W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV-VSW 82
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
LVS Y K ++ AR+ F+
Sbjct: 83 NGLVS--------------------------------------GYIKNRMIVEARNVFEL 104
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
M +V+ W AM+ GY + G EA LF M RN S TV L G + A
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN--EVSWTVMFGGLIDD--GRIDKA 160
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLH 435
+ + D + D+ +T +I + G V+ AR++FD E++V+ W+ MI GY +
Sbjct: 161 RKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 436 GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR----------- 484
+ A L+ M + +V++ +L SG + + E F M
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMI 272
Query: 485 -GFG--------------IEPR-NEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVS 525
GFG +E R N + ++ R G+ +A D +M + P
Sbjct: 273 VGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFP 332
Query: 526 VWGALLSAC----------KIHRHVTLGE-----YAAKKLFSLDPYNTGHYVQLSNLYAS 570
++LS C ++H H+ + Y A L ++ YV+ L +
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM-------YVKCGELVKA 385
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
++D + ++M +S + + E L++FH P S + N++
Sbjct: 386 KLVFDRFSSKDIIMWNSIISGYASHGLGE--EALKIFH----EMPSSGTMPNKV 433
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 56/259 (21%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H L+ + ++ + L+ G + A+ +FD FS D+ +WN+II GY+
Sbjct: 352 QVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHG 411
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L ++++ M G P+ T +L AC+
Sbjct: 412 LGEEALKIFHEMPSSGTMPNKVTLIAILTACS---------------------------- 443
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDR-----TVVSWTSIISGYAQNGEALEALRLFNQMRN 248
YA G + +F+ + + TV ++ + + G+ +A+ L M
Sbjct: 444 -----YA--GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTI 496
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD------LLISLTAFYAK 302
W AL+ + + +D L K FE+EPD LL S+ A +K
Sbjct: 497 KPDATVWGALLGACKTHSRLD-------LAEVAAKKLFENEPDNAGTYVLLSSINASRSK 549
Query: 303 CGQVIVARSFFDQMKTSSV 321
G V V R M+T++V
Sbjct: 550 WGDVAVVRK---NMRTNNV 565
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/648 (37%), Positives = 366/648 (56%), Gaps = 15/648 (2%)
Query: 90 LITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
LI V G ++ + A K+FD+ S +V W +I + R I + M G
Sbjct: 208 LIDMFVKGENSFEN---AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC---GNIG 206
+ D FT V AC EL + L +H IR G DV + LV MYAKC G++
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVD 322
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGE-ALEALRLFNQM-RNTDVKLDWIALVSIVRA 264
R VFD + D +V+SWT++I+GY +N A EA+ LF++M V+ + S +A
Sbjct: 323 DCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKA 382
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
G++ D G+ + G K G + S+ + + K ++ A+ F+ + +++ +
Sbjct: 383 CGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSY 442
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
N + G +N + E+A L E+ R + + T S A VGS++ + + V K
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ + V ALI MY+KCG++++A VF+ ++VI W++MI G+ HG +
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLET 562
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLG 503
++ M + GV PN+VT++ +L+AC+H GLV EGW F+ M I+P+ EHY+C+VDLL
Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC 622
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
RAG L A++FI M + V VW L AC++H + LG+ AA+K+ LDP Y+Q
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
LSN+YA + W+ +R M+E+ L K+ G S IE+ K+ F+VGD +HP + +IY+E
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDE 742
Query: 624 IQRLERRLKEIGFVPHTESVLHDLNYEEKEEN----LNIHSERIAVAYGLISTAPGTILR 679
+ RL +K G+VP T+ VLH L E E L HSE+IAVA+GLIST+ +R
Sbjct: 743 LDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVR 802
Query: 680 ITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ KNLR C +CH+ +K IS + REI++RD NRFHHFKDG CSC DYW
Sbjct: 803 VFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 201/412 (48%), Gaps = 13/412 (3%)
Query: 135 FRNTIEMYGLMRREGVDP-DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
R + LM R+G+ P D TF +LK+C DFRL LVH ++I + PD + N
Sbjct: 42 LRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 194 GLVAMYAKCGNIGMARVVFDGLN---DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
L+++Y+K G+ A VF+ + R VVSW+++++ Y NG L+A+++F +
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG-FEDEPDLLISLTAFYAKCGQVIV- 308
+ + +++RA + D + GR G ++K G FE + + SL + K
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A FD+M +V+ W MI+ + G EA+ F +M+ + D T+ S A A+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC---GNVESARIVFDRTSEKDVIMW 425
+ +L L + + + +S D V +L+DMYAKC G+V+ R VFDR + V+ W
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 426 SAMIMGYGLHGQ-GWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM 483
+A+I GY + EAINL+ M Q V PN TF AC + R G ++
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 484 RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACK 535
G+ + + V+ + ++ ++ A +S + VS L C+
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 59 YASLID---NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
+ASL+ N R +QIH+Q++ GL N + L++ S G I A ++F+
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
+ +V W ++I G+++ +E + M EGV P+ T+ +L AC+ +
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/589 (39%), Positives = 350/589 (59%), Gaps = 41/589 (6%)
Query: 176 VHGQVIRYGF--GPDVFVQN-GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQ 232
+H ++R+ P V N L YA G I + +F D + +T+ I+ +
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
NG +A L+ Q+ ++++ + S++++ + G+ +H ++K G +P +
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYV 163
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
L YAK G V+ A+ FD+M S++ AMI+ YAK G+ E A LF M R+I
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 353 --------------------------------KPDSVTVRSAALASAQVGSLKLAQWMDD 380
KPD +TV +A A +Q+G+L+ +W+
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
+V S ++ V T LIDMY+KCG++E A +VF+ T KD++ W+AMI GY +HG +
Sbjct: 284 FVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQD 343
Query: 441 AINLYHAMRQ-AGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCV 498
A+ L++ M+ G+ P D+TFIG L AC H+GLV EG +F M + +GI+P+ EHY C+
Sbjct: 344 ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCL 403
Query: 499 VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNT 558
V LLGRAG L +AY+ I M+++ +W ++L +CK+H LG+ A+ L L+ N+
Sbjct: 404 VSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNS 463
Query: 559 GHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSD 618
G YV LSN+YAS ++ VA VR LM+EKG+ K+ G S IEI K+ F GD+ H +S
Sbjct: 464 GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSK 523
Query: 619 EIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTIL 678
EIY ++++ R+K G+VP+T +VL DL EKE++L +HSER+A+AYGLIST PG+ L
Sbjct: 524 EIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPL 583
Query: 679 RITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+I KNLR C +CH+V KLISK+ R+I++RD NRFHHF DG CSCGD+W
Sbjct: 584 KIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 146 bits (368), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 194/421 (46%), Gaps = 54/421 (12%)
Query: 60 ASLIDNSTHKRHLDQIHNQLIVSGLKHN-------GFLITKLVNGSSNLGHICYARKLFD 112
A LID S + QIH + L+HN L KL ++ G I ++ LF
Sbjct: 33 AVLIDKSQSVDEVLQIHAAI----LRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFH 88
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL 172
+ PD+FL+ A I S + L +Y + ++P+ FTF +LK+C+ +
Sbjct: 89 QTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KS 144
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYAK---------------------------C--- 202
L+H V+++G G D +V GLV +YAK C
Sbjct: 145 GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAK 204
Query: 203 -GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQ-MRNTDVKLDWIALVS 260
GN+ AR +FD + +R +VSW +I GYAQ+G +AL LF + + K D I +V+
Sbjct: 205 QGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVA 264
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
+ A + LE GR +H + + L Y+KCG + A F+
Sbjct: 265 ALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 324
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREM--ITRNIKPDSVTVRSAALASAQVGSLKLAQWM 378
++ WNAMI+GYA +G++++A+ LF EM IT ++P +T A A G + +
Sbjct: 325 IVAWNAMIAGYAMHGYSQDALRLFNEMQGIT-GLQPTDITFIGTLQACAHAGLVNEGIRI 383
Query: 379 DDYVSKSEYASDIFVN--TALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLH 435
+ + + EY + L+ + + G ++ A + + + D ++WS+++ LH
Sbjct: 384 FESMGQ-EYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
Query: 436 G 436
G
Sbjct: 443 G 443
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/673 (36%), Positives = 372/673 (55%), Gaps = 45/673 (6%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLV--NGSSNLGHICYARKLFDEFSHPD 118
SL+++ + R L QIH I G+ + + KL+ S + YAR+L F PD
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPD 69
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVH 177
F++N ++RGYS S+ N++ ++ M R+G V PD F+F +V+KA R +H
Sbjct: 70 AFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMH 129
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL 237
Q +++G +FV L+ MY CG + AR VFD ++ +V+W ++I+ + +
Sbjct: 130 CQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVA 189
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
A +F++M +VR + + + G
Sbjct: 190 GAREIFDKM--------------LVRNHTSWNVMLAG----------------------- 212
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
Y K G++ A+ F +M + W+ MI G A NG E+ FRE+ + P+ V
Sbjct: 213 --YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEV 270
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
++ A +Q GS + + + +V K+ Y+ + VN ALIDMY++CGNV AR+VF+
Sbjct: 271 SLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGM 330
Query: 418 SEKDVIM-WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
EK I+ W++MI G +HGQG EA+ L++ M GV P+ ++FI LL AC+H+GL+ EG
Sbjct: 331 QEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEG 390
Query: 477 WELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACK 535
+ F M R + IEP EHY C+VDL GR+G L +AYDFI +M I P VW LL AC
Sbjct: 391 EDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS 450
Query: 536 IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGY 595
H ++ L E ++L LDP N+G V LSN YA++ W VA +R M + + K +
Sbjct: 451 SHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAW 510
Query: 596 SVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLK-EIGFVPHTESVLHDLNYEEKEE 654
S++E+ + F G+K E + +++ + RLK E G+ P S L+D+ EEKE+
Sbjct: 511 SLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKED 570
Query: 655 NLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFH 714
++ HSE++A+A+ L + G +RI KNLR C +CH+V+KL SK+ EI+VRD NRFH
Sbjct: 571 QVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFH 630
Query: 715 HFKDGLCSCGDYW 727
FKDG CSC DYW
Sbjct: 631 SFKDGSCSCRDYW 643
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/658 (36%), Positives = 373/658 (56%), Gaps = 8/658 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H+ ++ G N F+ L+N S G + AR +F+ D+ +W I+ Y +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
F +++++ MR G P+ +TF LKA L F + VHGQ+++ + D V G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
L+ +Y + G++ A VF+ + VV W+ +I+ + QNG EA+ LF +MR V +
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 255 WIALVSIVR--AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
L SI+ A G L G LHG ++K+GF+ + + +L YAKC ++ A
Sbjct: 348 EFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F ++ + + + WN +I GY G +A +FRE + + VT SA A A + S+
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
L + K+ A + V+ +LIDMYAKCG+++ A+ VF+ DV W+A+I GY
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPR 491
HG G +A+ + M+ PN +TF+G+L+ C+++GL+ +G E F M R GIEP
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLF 551
EHY+C+V LLGR+G LD+A I + EP V +W A+LSA + +A+++
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 552 SLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGD 611
++P + YV +SN+YA ++ W +VA +R M+E G+ K+ G S IE G + F VG
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 612 KSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIS 671
HP I ++ L + G+VP +VL D++ EEK++ L +HSER+A+AYGL+
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 672 TAPGTILR--ITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
P + R I KNLR C +CHS +K+IS +V+R++++RD NRFHHF G+CSCGD+W
Sbjct: 766 M-PSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 218/467 (46%), Gaps = 13/467 (2%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH ++ G + F L+N G A LFDE + + + +GY+
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA---- 126
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
++ I +Y + REG + + F LK L + +H +++ G+ + FV
Sbjct: 127 CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAA 186
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
L+ Y+ CG++ AR VF+G+ + +V W I+S Y +NG ++L+L + MR +
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPN 246
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+ ++A + + + +HG I+K + +P + + L Y + G + A F+
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+M + V+ W+ MI+ + +NG EAVDLF M + P+ T+ S A L
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ + V K + DI+V+ ALID+YAKC +++A +F S K+ + W+ +I+GY
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYEN 426
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
G+G +A +++ + V +VTF L AC + G ++ G I+ N
Sbjct: 427 LGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV----HGLAIKTNNAK 482
Query: 495 YSCV----VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
V +D+ + G + A +M V+ W AL+S H
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEMET-IDVASWNALISGYSTH 528
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 182/379 (48%), Gaps = 5/379 (1%)
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF 212
D + +L+ C + D + +H +++ G D+F N L+ Y K G A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
D + +R VS+ ++ GYA + + L++++ +L+ S ++ + +D E
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
LH I+K+G++ + +L Y+ CG V AR+ F+ + +++W ++S Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
+NG+ E+++ L M P++ T +A AS +G+ A+ + + K+ Y D
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
V L+ +Y + G++ A VF+ + DV+ WS MI + +G EA++L+ MR+A
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
V PN+ T +L C G +L + G + + ++D+ + +D A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 513 DFIMKMSIEPGVSVWGALL 531
++S + VS W ++
Sbjct: 404 KLFAELSSKNEVS-WNTVI 421
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 2/289 (0%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+Q+H ++ G + ++ L++ + + A KLF E S + WN +I GY
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
M+ R V TF L AC L L VHG I+ V V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L+ MYAKCG+I A+ VF+ + V SW ++ISGY+ +G +ALR+ + M++ D K
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIK-MGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ + + ++ + ++QG+ +I+ G E + + + GQ+ A
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 312 FFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
+ + SV++W AM+S + E A E++ N K ++ V
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYV 656
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/668 (35%), Positives = 363/668 (54%), Gaps = 5/668 (0%)
Query: 65 NSTHKRHLDQIHNQLIV---SGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
NS++ R + IH LIV S + + I L+N ARKLFD +V
Sbjct: 43 NSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVS 102
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVD-PDGFTFPYVLKACTELLDFRLSCLVHGQV 180
W A+++GY S ++++ M G P+ F V K+C+ HG
Sbjct: 103 WCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCF 162
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
++YG FV+N LV MY+ C G A V D L + ++S +SGY + G E L
Sbjct: 163 LKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGL 222
Query: 241 RLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFY 300
+ + N D + + +S +R + ++ DL +H +++ GF E + +L Y
Sbjct: 223 DVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMY 282
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
KCG+V+ A+ FD ++ + ++ Y ++ EEA++LF +M T+ + P+ T
Sbjct: 283 GKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFA 342
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK 420
+ A++ LK + V KS Y + + V AL++MYAK G++E AR F + +
Sbjct: 343 ILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
D++ W+ MI G HG G EA+ + M G PN +TFIG+L AC+H G V +G F
Sbjct: 403 DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYF 462
Query: 481 -HCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH 539
M+ F ++P +HY+C+V LL +AG A DF+ IE V W LL+AC + R+
Sbjct: 463 NQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRN 522
Query: 540 VTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIE 599
LG+ A+ P ++G YV LSN++A SR W+ VA VR LM +G+ K+ G S I
Sbjct: 523 YRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIG 582
Query: 600 INGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIH 659
I + VF D HP IY +++ + ++K +G+ P HD++ E++E+NL+ H
Sbjct: 583 IRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYH 642
Query: 660 SERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDG 719
SE++AVAYGLI T + L +TKN+R C +CHS IKLISK+ +R I++RD+NRFHHF DG
Sbjct: 643 SEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDG 702
Query: 720 LCSCGDYW 727
CSC DYW
Sbjct: 703 QCSCCDYW 710
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/571 (37%), Positives = 342/571 (59%), Gaps = 3/571 (0%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
+L AC + R VH +I+ + P +++ L+ Y KC + AR V D + ++
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
VVSWT++IS Y+Q G + EAL +F +M +D K + +++ + L G+ +HG
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
I+K ++ + SL YAK GQ+ AR F+ + V+ A+I+GYA+ G EE
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEE 237
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
A+++F + + + P+ VT S A + + L + +V + E + +LID
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR-QAGVCPNDV 458
MY+KCGN+ AR +FD E+ I W+AM++GY HG G E + L+ MR + V P+ V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 459 TFIGLLTACNHSGLVREGWELFHCMRG--FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIM 516
T + +L+ C+H + G +F M +G +P EHY C+VD+LGRAG +D+A++FI
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 517 KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDH 576
+M +P V G+LL AC++H V +GE ++L ++P N G+YV LSNLYAS+ W
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 577 VAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGF 636
V +VR +M +K ++K+ G S I+ L FH D++HPR +E+ +++ + ++K+ G+
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Query: 637 VPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKL 696
VP VL+D++ E+KE+ L HSE++A+ +GLI+T G +R+ KNLR CV+CH+ K+
Sbjct: 538 VPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKI 597
Query: 697 ISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
SK+ ERE+ +RD NRFH DG+CSCGDYW
Sbjct: 598 FSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 185/369 (50%), Gaps = 8/369 (2%)
Query: 59 YASLIDNSTHKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y +L++ KR L ++H +I + +L T+L+ + ARK+ DE
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
+V W A+I YS++ + ++ M R P+ FTF VL +C L
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+HG ++++ + +FV + L+ MYAK G I AR +F+ L +R VVS T+II+GYAQ G
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
EAL +F+++ + + +++ S++ A + L+ G+ H +++ L S
Sbjct: 235 DEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 294
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI-TRNIKP 354
L Y+KCG + AR FD M + I WNAM+ GY+K+G E ++LFR M + +KP
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 354
Query: 355 DSVTVRSAALASAQVGSLK-LAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESAR 411
D+VT+ A L+ G ++ + D + EY + ++DM + G ++ A
Sbjct: 355 DAVTLL-AVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 412 IVFDRTSEK 420
R K
Sbjct: 414 EFIKRMPSK 422
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 152/316 (48%), Gaps = 14/316 (4%)
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
IS NG EAL +M ++ + +++ A D L G+ +H +IK +
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
L L FY KC + AR D+M +V+ W AMIS Y++ GH+ EA+ +F E
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN 406
M+ + KP+ T + + + L L + + + K Y S IFV ++L+DMYAK G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 407 VESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
++ AR +F+ E+DV+ +A+I GY G EA+ ++H + G+ PN VT+ LLTA
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 467 CNHSGLVREGWELFHCMRGFGIEPRNEHYSCV-----VDLLGRAGYLDQAYDFIMKMSIE 521
+ L+ G + HC + R + V +D+ + G L A M
Sbjct: 264 LSGLALLDHGKQA-HCH----VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Query: 522 PGVSVWGALLSACKIH 537
+S W A+L H
Sbjct: 319 TAIS-WNAMLVGYSKH 333
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/511 (40%), Positives = 323/511 (63%), Gaps = 3/511 (0%)
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLH 278
V W ++I GYA+ G ++ A L+ +MR + V+ D +++A + D+ G ++H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAE 338
+I+ GF + SL YA CG V A FD+M ++ WN++I+G+A+NG E
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 339 EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
EA+ L+ EM ++ IKPD T+ S A A++G+L L + + Y+ K ++ + L+
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLL 264
Query: 399 DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA-GVCPND 457
D+YA+CG VE A+ +FD +K+ + W+++I+G ++G G EAI L+ M G+ P +
Sbjct: 265 DLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCE 324
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIM 516
+TF+G+L AC+H G+V+EG+E F MR + IEPR EH+ C+VDLL RAG + +AY++I
Sbjct: 325 ITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 384
Query: 517 KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDH 576
M ++P V +W LL AC +H L E+A ++ L+P ++G YV LSN+YAS + W
Sbjct: 385 SMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSD 444
Query: 577 VAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGF 636
V +R M G+ K G+S++E+ ++ F +GDKSHP+SD IY +++ + RL+ G+
Sbjct: 445 VQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 504
Query: 637 VPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKL 696
VP +V D+ EEKE + HSE+IA+A+ LIST + + + KNLR C +CH IKL
Sbjct: 505 VPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 564
Query: 697 ISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+SK+ REI+VRD +RFHHFK+G CSC DYW
Sbjct: 565 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 186/338 (55%), Gaps = 5/338 (1%)
Query: 104 ICYARKLFDEFSHP-DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVL 161
+ YA K+F + P +VF+WN +IRGY+ + +Y MR G V+PD T+P+++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
KA T + D RL +H VIR GFG ++VQN L+ +YA CG++ A VFD + ++ +V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
+W S+I+G+A+NG+ EAL L+ +M + +K D +VS++ A + L G+ +H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 282 IKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAV 341
IK+G L YA+CG+V A++ FD+M + + W ++I G A NG +EA+
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 342 DLFREM-ITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALID 399
+LF+ M T + P +T A + G +K ++ + + I ++D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 400 MYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHG 436
+ A+ G V+ A + + +V++W ++ +HG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/761 (32%), Positives = 395/761 (51%), Gaps = 114/761 (14%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPD---------------- 118
+H +I G + ++ +L++ + YAR+LFDE S PD
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 119 ------VF-----------LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVL 161
VF ++NA+I G+S +N + I ++ M+ EG PD FTF VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 162 KACTELLDFRLSCL-VHGQVIRYGFGPDVFVQNGLVAMYAKCGN----IGMARVVFDGLN 216
+ D C+ H ++ G G V N LV++Y+KC + + AR VFD +
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 217 DRTVVSWTSIISGYAQNG-----EAL---------------------------EALRLFN 244
++ SWT++++GY +NG E L EAL +
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK-----MGFEDEPDLLISLTAF 299
+M ++ ++LD S++RA L+ G+ +H +++ F++ SL +
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN------SLVSL 329
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI------- 352
Y KCG+ AR+ F++M ++ WNA++SGY +GH EA +F+EM +NI
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389
Query: 353 ------------------------KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
+P A + A +G+ Q + K +
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
S + ALI MYAKCG VE AR VF D + W+A+I G HG G EA+++Y M
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGY 507
+ G+ P+ +T + +LTAC+H+GLV +G + F M + I P +HY+ ++DLL R+G
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569
Query: 508 LDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNL 567
A I + +P +W ALLS C++H ++ LG AA KLF L P + G Y+ LSN+
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629
Query: 568 YASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRL 627
+A++ W+ VA VR LMR++G+ K++ S IE+ ++ F V D SHP ++ +Y +Q L
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Query: 628 ERRLKEIGFVPHTESVLHDLNYE-EKEENLNIHSERIAVAYGLISTAPGTILRITKNLRA 686
+ ++ +G+VP T VLHD+ + KE+ L HSE+IAVA+GL+ PGT +RI KNLR
Sbjct: 690 GKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRT 749
Query: 687 CVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
C +CH+ + +S +V+R+II+RD RFHHF++G CSCG++W
Sbjct: 750 CGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 198/447 (44%), Gaps = 80/447 (17%)
Query: 161 LKACTEL--LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND- 217
L+ C L +L+ VHG +I +GF P + N L+ +Y K + AR +FD +++
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 218 --------------------------------RTVVSWTSIISGYAQNGEALEALRLFNQ 245
R V + ++I+G++ N + A+ LF +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 246 MRNTDVKLDWIALVSIVRAYGDV-DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
M++ K D S++ V DD +Q H +K G + +L + Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 305 Q----VIVARSFFDQ-----------MKTSSV---------------------IMWNAMI 328
+ AR FD+ M T V + +NAMI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
SGY G +EA+++ R M++ I+ D T S A A G L+L + + YV + E
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
S F N+ L+ +Y KCG + AR +F++ KD++ W+A++ GY G EA ++ M
Sbjct: 319 SFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEM 377
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD---LLGRA 505
++ N ++++ +++ +G EG +LF CM+ G EP + +S + +LG
Sbjct: 378 KE----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 506 GYLDQAYDFIMKMSIEPGVSVWGALLS 532
Q + ++K+ + +S AL++
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALIT 460
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/671 (34%), Positives = 370/671 (55%), Gaps = 6/671 (0%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF 120
S++ + H++ IH ++ G + L+ + G A +F + D+
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 328
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
WN+++ + + + + M G + TF L AC F ++HG V
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
+ G + + N LV+MY K G + +R V + R VV+W ++I GYA++ + +AL
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 241 RLFNQMRNTDVKLDWIALVSIVRA---YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
F MR V ++I +VS++ A GD+ LE+G+ LH I+ GFE + + SL
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLI 506
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
YAKCG + ++ F+ + ++I WNAM++ A +GH EE + L +M + + D
Sbjct: 507 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQF 566
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
+ A+A++ L+ Q + K + D F+ A DMY+KCG + + +
Sbjct: 567 SFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS 626
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
+ + W+ +I G HG E +H M + G+ P VTF+ LLTAC+H GLV +G
Sbjct: 627 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 686
Query: 478 ELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
+ + R FG+EP EH CV+DLLGR+G L +A FI KM ++P VW +LL++CKI
Sbjct: 687 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 746
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
H ++ G AA+ L L+P + YV SN++A++ W+ V +VR M K + K S
Sbjct: 747 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 806
Query: 597 VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENL 656
+++ K+ F +GD++HP++ EIY +++ +++ +KE G+V T L D + E+KE NL
Sbjct: 807 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 866
Query: 657 NIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHF 716
HSER+A+AY L+ST G+ +RI KNLR C +CHSV K +S+++ R I++RD RFHHF
Sbjct: 867 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 926
Query: 717 KDGLCSCGDYW 727
+ GLCSC DYW
Sbjct: 927 ERGLCSCKDYW 937
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 242/496 (48%), Gaps = 7/496 (1%)
Query: 50 DHGLNLDSFY-ASLID----NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
D G+ SF ASL+ + + R Q+H + SGL + ++ T +++ G +
Sbjct: 51 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 110
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
+RK+F+E +V W +++ GYS I++Y MR EGV + + V+ +C
Sbjct: 111 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
L D L + GQV++ G + V+N L++M GN+ A +FD +++R +SW
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
SI + YAQNG E+ R+F+ MR +++ + +++ G VD + GR +HG ++KM
Sbjct: 231 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 290
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
GF+ + +L YA G+ + A F QM T +I WN++++ + +G + +A+ L
Sbjct: 291 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
MI+ + VT SA A + + + V S + + AL+ MY K
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
G + +R V + +DV+ W+A+I GY +A+ + MR GV N +T + +L
Sbjct: 411 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 470
Query: 465 TACNHSG-LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
+AC G L+ G L + G E + ++ + + G L + D +
Sbjct: 471 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRN 529
Query: 524 VSVWGALLSACKIHRH 539
+ W A+L+A H H
Sbjct: 530 IITWNAMLAANAHHGH 545
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 203/434 (46%), Gaps = 2/434 (0%)
Query: 99 SNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFP 158
+ G + AR LFD + WN ++ G R L+ +E + M G+ P F
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 159 YVLKACTELLD-FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND 217
++ AC FR VHG V + G DV+V ++ +Y G + +R VF+ + D
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
R VVSWTS++ GY+ GE E + ++ MR V + ++ ++ + G + D GR +
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQI 182
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
G ++K G E + + SL + G V A FDQM I WN++ + YA+NGH
Sbjct: 183 IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHI 242
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
EE+ +F M + + +S TV + V K + + V K + S + V L
Sbjct: 243 EESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTL 302
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+ MYA G A +VF + KD+I W++++ + G+ +A+ L +M +G N
Sbjct: 303 LRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNY 362
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
VTF L AC +G L + G+ + +V + G+ G + ++ +++
Sbjct: 363 VTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ 422
Query: 518 MSIEPGVSVWGALL 531
M V W AL+
Sbjct: 423 MP-RRDVVAWNALI 435
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 7/276 (2%)
Query: 198 MYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIA 257
MY K G + AR +FD + R VSW +++SG + G LE + F +M + +K
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 258 LVSIVRAYGDVDDL-EQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM 316
+ S+V A G + +G +HG + K G + + ++ Y G V +R F++M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 317 KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK--- 373
+V+ W +++ GY+ G EE +D+++ M + + S +L + G LK
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE---NSMSLVISSCGLLKDES 177
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
L + + V KS S + V +LI M GNV+ A +FD+ SE+D I W+++ Y
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNH 469
+G E+ ++ MR+ N T LL+ H
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 132/246 (53%), Gaps = 8/246 (3%)
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
Y K G+V AR FD M + + WN M+SG + G E ++ FR+M IKP S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 359 VRSAALASAQVGSL-KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
+ S A + GS+ + + +V+KS SD++V+TA++ +Y G V +R VF+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE-- 475
+++V+ W+++++GY G+ E I++Y MR GV N+ + ++++C GL+++
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 476 -GWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
G ++ + G+E + + ++ +LG G +D A +MS +S W ++ +A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAY 236
Query: 535 KIHRHV 540
+ H+
Sbjct: 237 AQNGHI 242
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/684 (34%), Positives = 376/684 (54%), Gaps = 12/684 (1%)
Query: 52 GLNLDSF-YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYA 107
G+ D+F Y +I + L++ IH +I G + ++ L++ LG A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 108 RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
K+F+E D+ WN++I GY +++ ++ M + G PD F+ L AC+ +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 168 LDFRLSCLVHGQVIRYGFGP-DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
++ +H +R DV V ++ MY+K G + A +F+G+ R +V+W +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 227 ISGYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
I YA+NG +A F +M + ++ D I ++++ A + +GR++HG ++ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRG 360
Query: 286 FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFR 345
F L +L Y +CGQ+ A FD+M +VI WN++I+ Y +NG A++LF+
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQ 420
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
E+ ++ PDS T+ S A A+ SL + + Y+ KS Y S+ + +L+ MYA CG
Sbjct: 421 ELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 406 NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
++E AR F+ KDV+ W+++IM Y +HG G ++ L+ M + V PN TF LL
Sbjct: 481 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 466 ACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGV 524
AC+ SG+V EGWE F M R +GI+P EHY C++DL+GR G A F+ +M P
Sbjct: 541 ACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTA 600
Query: 525 SVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLM 584
+WG+LL+A + H+ +T+ E+AA+++F ++ NTG YV L N+YA + W+ V +++LM
Sbjct: 601 RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLM 660
Query: 585 REKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVL 644
KG+S+ S +E GK VF GD+SH +++IY + + R + E H S L
Sbjct: 661 ESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRL 720
Query: 645 HDLNYEEKEEN-LNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVER 703
+ N HS R+A +GLIST G + + N R C CH ++ S+L R
Sbjct: 721 RPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRR 780
Query: 704 EIIVRDANRFHHFKDGLCSCGDYW 727
EI+V D+ FHHF +G CSCG+YW
Sbjct: 781 EIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 213/395 (53%), Gaps = 6/395 (1%)
Query: 87 NGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
N +T+ + G ++ + A +LFDE + D FLWN +I+G++ L+ ++ Y M
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
GV D FT+P+V+K+ + +H VI+ GF DV+V N L+++Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG 266
A VF+ + +R +VSW S+ISGY G+ +L LF +M K D + +S + A
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 267 DVDDLEQGRSLHGCIIKMGFED-EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWN 325
V + G+ +H ++ E + ++ S+ Y+K G+V A F+ M +++ WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 326 AMISGYAKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
MI YA+NG +A F++M +N ++PD +T + ASA + + + Y +
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR 358
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ + + TALIDMY +CG ++SA ++FDR +EK+VI W+++I Y +G+ + A+ L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+ + + + P+ T +L A S + EG E+
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 360/641 (56%), Gaps = 14/641 (2%)
Query: 90 LITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
L TK++ G + + A LFDE DV WN++I G ++++ M
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG-PDVFVQNGLVAMYAKCGNIGMA 208
V ++ ++ C FR + + + Y D N +V Y + G + A
Sbjct: 128 V----VSWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 209 RVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDV 268
+F + + V+SWT++I G QN + EAL LF M +K ++ A +
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
G +HG IIK+GF E + SL FYA C ++ +R FD+ V +W A++
Sbjct: 239 PAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALL 298
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
SGY+ N E+A+ +F M+ +I P+ T S + + +G+L + M K
Sbjct: 299 SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLE 358
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
+D FV +L+ MY+ GNV A VF + +K ++ W+++I+G HG+G A ++ M
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFG-IEPRNEHYSCVVDLLGRAG 506
+ P+++TF GLL+AC+H G + +G +LF+ M G I+ + +HY+C+VD+LGR G
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 507 YLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSN 566
L +A + I +M ++P VW ALLSAC++H V GE AA +F+LD ++ YV LSN
Sbjct: 479 KLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSN 538
Query: 567 LYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
+YAS+ W +V+ +RV M++ G+ K G S + I GK F GD+ P IY +++
Sbjct: 539 IYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEF 596
Query: 627 LERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRA 686
L +LKE+G+ P S LHD+ E+KEE L HSER+A+A+GLI+T G+ + + KNLR
Sbjct: 597 LREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRV 656
Query: 687 CVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
C +CH+VIKLIS +V REI++RD RFHHFK+G CSCGDYW
Sbjct: 657 CEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
P V + ++ Y + + A +FD + R VVSW S+ISG + G+ A++LF++M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQV 306
V + W A+V+ G VD E+ +M +D S+ Y + G+V
Sbjct: 124 PERSV-VSWTAMVNGCFRSGKVDQAER------LFYQMPVKDTA-AWNSMVHGYLQFGKV 175
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
A F QM +VI W MI G +N + EA+DLF+ M+ IK S A
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
A + + + + K + + +V+ +LI YA C + +R VFD + V +W+
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
A++ GY L+ + +A++++ M + + PN TF L +C+ G + G E+
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
G+E + +V + +G ++ A +K+ + VS W +++ C H
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS-WNSIIVGCAQH 405
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 102/204 (50%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H +I G + ++ L+ +N I +RK+FDE H V +W A++ GYS +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + ++ M R + P+ TF L +C+ L +HG ++ G D FV N
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MY+ GN+ A VF + +++VSW SII G AQ+G A +F QM + +
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 254 DWIALVSIVRAYGDVDDLEQGRSL 277
D I ++ A LE+GR L
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKL 449
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
AR F+Q+ + V ++ MI+GY ++ +A++LF EM R D V+ S +
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISGCVE 109
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
G + A + D + + S TA+++ + G V+ A +F + KD W++M
Sbjct: 110 CGDMNTAVKLFDEMPERSVVS----WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSM 165
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
+ GY G+ +A+ L+ M V +++ ++ + + E +LF M I
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPGKNV----ISWTTMICGLDQNERSGEALDLFKNMLRCCI 221
Query: 489 EPRNEHYSCVVDLLGRAGYLD---QAYDFIMKM 518
+ + ++CV+ A Q + I+K+
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/679 (34%), Positives = 380/679 (55%), Gaps = 40/679 (5%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHP 117
++A+L+ K D++ ++ I+S NG LV+G G I ARK+FD
Sbjct: 58 YFANLMPRDARKL-FDEMPDRNIIS---WNG-----LVSGYMKNGEIDEARKVFDLMPER 108
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL--SCL 175
+V W A+++GY + ++ M P+ + + L D R+ +C
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVMLIGFLQDGRIDDACK 162
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
++ + D + ++ K G + AR +FD +++R+V++WT++++GY QN
Sbjct: 163 LYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNR 218
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP-DLLI 294
+A ++F+ M ++ W +++ G ++D E+ FE P +I
Sbjct: 219 VDDARKIFDVMPEK-TEVSWTSMLMGYVQNGRIEDAEEL-----------FEVMPVKPVI 266
Query: 295 SLTAFYAKCGQ---VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
+ A + GQ + AR FD MK + W +I + +NG EA+DLF M +
Sbjct: 267 ACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQG 326
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
++P T+ S A + SL + + + + ++ D++V + L+ MY KCG + ++
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC-PNDVTFIGLLTACNHS 470
++FDR KD+IMW+++I GY HG G EA+ ++ M +G PN+VTF+ L+AC+++
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 471 GLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGA 529
G+V EG +++ M FG++P HY+C+VD+LGRAG ++A + I M++EP +VWG+
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 530 LLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGL 589
LL AC+ H + + E+ AKKL ++P N+G Y+ LSN+YAS W VA +R LM+ + +
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 590 SKDLGYSVIEINGKLQVFHVGD-KSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLN 648
K G S E+ K+ F G SHP + I + L+ L+E G+ P LHD++
Sbjct: 567 RKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVD 626
Query: 649 YEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVR 708
EEK +L HSER+AVAY L+ + G +R+ KNLR C +CH+ IK+ISK+ EREII+R
Sbjct: 627 EEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILR 686
Query: 709 DANRFHHFKDGLCSCGDYW 727
DANRFHHF++G CSC DYW
Sbjct: 687 DANRFHHFRNGECSCKDYW 705
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 57/370 (15%)
Query: 99 SNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFP 158
S +G I ARKLFD + WN+++ GY + + R+ +++ M PD
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR---- 77
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
++ NGLV+ Y K G I AR VFD + +R
Sbjct: 78 -----------------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPER 108
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
VVSWT+++ GY NG+ A LF +M + K+ W ++ + L+ GR
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKN-KVSWTVML--------IGFLQDGRIDD 159
Query: 279 GCIIKMGFEDEPDLL-ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
C + D+ ++ S+ K G+V AR FD+M SVI W M++GY +N
Sbjct: 160 ACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
++A +F M + V+ S + Q G ++ A+ + + + + A+
Sbjct: 220 DDARKIFDVMPEKT----EVSWTSMLMGYVQNGRIEDAEELFEVMP----VKPVIACNAM 271
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
I + G + AR VFD E++ W +I + +G EA++L+ M++ GV P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 458 VTFIGLLTAC 467
T I +L+ C
Sbjct: 332 PTLISILSVC 341
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 182/407 (44%), Gaps = 43/407 (10%)
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N + ++ G I AR +FD + +++ SW S+++GY N +A +LF++M + ++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI- 79
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL-LISLTAF---YAKCGQVIV 308
+ W LVS G++D+ + F+ P+ ++S TA Y G+V V
Sbjct: 80 ISWNGLVSGYMKNGEIDEARK-----------VFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A S F +M + + W M+ G+ ++G ++A L+ EMI D++ S +
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLCK 184
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
G + A+ + D +S+ + T ++ Y + V+ AR +FD EK + W++M
Sbjct: 185 EGRVDEAREIFDEMSE----RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
+MGY +G+ +A L+ M V + GL G + + +F M+
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMK---- 292
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYD-FIM--KMSIEPGVSVWGALLSAC----KIHRHVT 541
E + + V+ + R G+ +A D FI+ K + P ++LS C +H
Sbjct: 293 ERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 542 LGEYAAKKLFSLDPYNTG----HYVQLSNLYASSRLWDHVAHVRVLM 584
+ + F +D Y Y++ L S ++D ++M
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 323/527 (61%), Gaps = 2/527 (0%)
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
++ AR +F+ +++ +V + S+ GY++ LE LF ++ + D S++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
+A LE+GR LH +K+G +D + +L Y +C V AR FD++ V+
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
+NAMI+GYA+ EA+ LFREM + +KP+ +T+ S + A +GSL L +W+ Y
Sbjct: 197 CYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
K + + VNTALIDM+AKCG+++ A +F++ KD WSAMI+ Y HG+ +++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDL 501
++ MR V P+++TF+GLL AC+H+G V EG + F M FGI P +HY +VDL
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHY 561
L RAG L+ AY+FI K+ I P +W LL+AC H ++ L E ++++F LD + G Y
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDY 436
Query: 562 VQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIY 621
V LSNLYA ++ W++V +R +M+++ K G S IE+N + F GD + +++
Sbjct: 437 VILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLH 496
Query: 622 NEIQRLERRLKEIGFVPHTESVLH-DLNYEEKEENLNIHSERIAVAYGLISTAPGTILRI 680
+ + + LK G+VP T V+H ++N +EKE L HSE++A+ +GL++T PGT +R+
Sbjct: 497 RALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRV 556
Query: 681 TKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KNLR C +CH+ KLIS + R++++RD RFHHF+DG CSCGD+W
Sbjct: 557 VKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/384 (29%), Positives = 194/384 (50%), Gaps = 12/384 (3%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVN---GSSNLGHICYARKLFDEFSHPD 118
LI R L QI I S ++ F + KL+N S + YAR LF+ S PD
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVSF-VAKLINFCTESPTESSMSYARHLFEAMSEPD 93
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGL---MRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
+ ++N++ RGYSR F N +E++ L + +G+ PD +TFP +LKAC
Sbjct: 94 IVIFNSMARGYSR---FTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H ++ G +V+V L+ MY +C ++ AR VFD + + VV + ++I+GYA+
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
EAL LF +M+ +K + I L+S++ + + L+ G+ +H K F + +
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
L +AKCG + A S F++M+ W+AMI YA +G AE+++ +F M + N++PD
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 356 SVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF 414
+T A + G ++ ++ VSK I +++D+ ++ GN+E A
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 415 DRTS-EKDVIMWSAMIMGYGLHGQ 437
D+ ++W ++ H
Sbjct: 391 DKLPISPTPMLWRILLAACSSHNN 414
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 329/557 (59%), Gaps = 6/557 (1%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
VH +I G+G + L+ + I ++F + + S+I ++
Sbjct: 28 VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRL 87
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
L + + +M +++V S++++ D+ L G+ +H + GF + + +
Sbjct: 88 PLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAA 147
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
L FY+KCG + AR FD+M S++ WN+++SG+ +NG A+EA+ +F +M +PD
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPD 207
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
S T S A AQ G++ L W+ Y+ ++ + TALI++Y++CG+V AR VFD
Sbjct: 208 SATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFD 267
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR-QAGVCPNDVTFIGLLTACNHSGLVR 474
+ E +V W+AMI YG HG G +A+ L++ M G PN+VTF+ +L+AC H+GLV
Sbjct: 268 KMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 475 EGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE---PGVSVWGAL 530
EG ++ M + + + P EH+ C+VD+LGRAG+LD+AY FI ++ ++W A+
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Query: 531 LSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLS 590
L ACK+HR+ LG AK+L +L+P N GH+V LSN+YA S D V+H+R M L
Sbjct: 388 LGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLR 447
Query: 591 KDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYE 650
K +GYSVIE+ K +F +GD+SH + EIY ++ L R KEIG+ P +E V+H + E
Sbjct: 448 KQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEE 507
Query: 651 EKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDA 710
EKE L HSE++AVA+GL+ T I I KNLR C +CHS K IS + R+I VRD
Sbjct: 508 EKEFALRYHSEKLAVAFGLLKTVDVAIT-IVKNLRICEDCHSAFKYISIVSNRQITVRDK 566
Query: 711 NRFHHFKDGLCSCGDYW 727
RFHHF++G CSC DYW
Sbjct: 567 LRFHHFQNGSCSCLDYW 583
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 201/383 (52%), Gaps = 6/383 (1%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPD 118
Y +++ + L Q+H LIV+G + L+TKL+ + + I Y LF PD
Sbjct: 12 YEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPD 71
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHG 178
FL+N++I+ S+ L + + Y M V P +TF V+K+C +L R+ VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 179 QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALE 238
+ GFG D +VQ LV Y+KCG++ AR VFD + ++++V+W S++SG+ QNG A E
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
A+++F QMR + + D VS++ A + G +H II G + L +L
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSV 357
Y++CG V AR FD+MK ++V W AMIS Y +G+ ++AV+LF +M P++V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKS-EYASDIFVNTALIDMYAKCGNVESARIV--- 413
T + A A G ++ + + ++KS + + ++DM + G ++ A
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 414 FDRTSEKDV-IMWSAMIMGYGLH 435
D T + +W+AM+ +H
Sbjct: 372 LDATGKATAPALWTAMLGACKMH 394
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
T V + A +IVRA V L+Q +H +I G+ LL L +
Sbjct: 2 TTKVAANSAAYEAIVRAGPRVKQLQQ---VHAHLIVTGYGRSRSLLTKLITLACSARAIA 58
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
F + ++N++I +K V +R M++ N+ P + T S + A
Sbjct: 59 YTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCA 118
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
+ +L++ + + + S + D +V AL+ Y+KCG++E AR VFDR EK ++ W++
Sbjct: 119 DLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNS 178
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG 487
++ G+ +G EAI +++ MR++G P+ TF+ LL+AC +G V G + + G
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
++ + + +++L R G + +A + KM E V+ W A++SA H
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTH 287
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 353/632 (55%), Gaps = 45/632 (7%)
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
L R +++ G ++ P T+ +++ C++ VH + GF P + +
Sbjct: 68 KLLREAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L+ MYAKCG++ AR VFD + +R + SW +++GYA+ G EA +LF++M D
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD-S 182
Query: 253 LDWIALVSIVRAYGDVDDLEQ------------------------------------GRS 276
W A+V+ Y D E+ G+
Sbjct: 183 YSWTAMVT---GYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+HG I++ G + + L SL Y KCG + AR+ FD++ V+ W +MI Y K+
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
E LF E++ +P+ T A A + + +L + + Y+++ + F +++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
L+DMY KCGN+ESA+ V D + D++ W+++I G +GQ EA+ + + ++G P+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
VTF+ +L+AC H+GLV +G E F+ + + ++HY+C+VDLL R+G +Q I
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 516 MKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWD 575
+M ++P +W ++L C + ++ L E AA++LF ++P N YV ++N+YA++ W+
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 576 HVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIG 635
+R M+E G++K G S EI K VF D SHP ++I ++ L +++KE G
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Query: 636 FVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIK 695
+VP T VLHD+ E+KEENL HSE++AVA+ ++ST GT +++ KNLR+CV+CH IK
Sbjct: 600 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 659
Query: 696 LISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
IS + +R+I VRD+ RFH F++G CSCGDYW
Sbjct: 660 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 18/408 (4%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRR-EGVDP 152
+VNG + +G + ARKLFDE + D + W A++ GY + + + +Y LM+R P
Sbjct: 157 MVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP 216
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF 212
+ FT + A + R +HG ++R G D + + L+ MY KCG I AR +F
Sbjct: 217 NIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIF 276
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
D + ++ VVSWTS+I Y ++ E LF+++ + + + ++ A D+ E
Sbjct: 277 DKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
G+ +HG + ++GF+ SL Y KCG + A+ D ++ W ++I G A
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCA 396
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE-----Y 387
+NG +EA+ F ++ KPD VT + A G ++ + ++ + S +E +
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE--KGLEFFYSITEKHRLSH 454
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDRTSEK-DVIMWSAMIMGYGLHGQGWEAINLYH 446
SD + T L+D+ A+ G E + V K +W++++ G +G I+L
Sbjct: 455 TSDHY--TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN----IDLAE 508
Query: 447 AMRQA--GVCP-NDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
Q + P N VT++ + +G E ++ M+ G+ R
Sbjct: 509 EAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR 556
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 141/289 (48%), Gaps = 4/289 (1%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R +IH ++ +GL + L + L++ G I AR +FD+ DV W ++I Y
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY 294
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+S+ +R ++ + P+ +TF VL AC +L L VHG + R GF P
Sbjct: 295 FKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
F + LV MY KCGNI A+ V DG +VSWTS+I G AQNG+ EAL+ F+ + +
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII-KMGFEDEPDLLISLTAFYAKCGQVIV 308
K D + V+++ A +E+G I K D L A+ G+
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 309 ARSFFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
+S +M S +W +++ G + G+ + A + +E+ I+P++
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF--KIEPEN 521
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 44/235 (18%)
Query: 339 EAVD------LFRE---MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
EA+D L RE ++ R KP + T + +Q +L+ + + +++ S +
Sbjct: 59 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 390 DIFVNTALIDMYAKCGN-------------------------------VESARIVFDRTS 418
I + L+ MYAKCG+ +E AR +FD +
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 419 EKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSGLVREGW 477
EKD W+AM+ GY Q EA+ LY M R PN T + A +R G
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 478 ELF-HCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
E+ H +R G++ +S ++D+ G+ G +D+A + K+ +E V W +++
Sbjct: 239 EIHGHIVRA-GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/608 (35%), Positives = 354/608 (58%), Gaps = 43/608 (7%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM------YAKCGNI-GMARVVF 212
+L++C+ D ++ +HG ++R DVFV + L+A+ + K N+ G A +F
Sbjct: 18 LLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
+ + + + +I ++ E +A + QM + + D I +++A +++ +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 273 QGRSLHGCIIKMGFED----EPDLL---------------------------ISLTAFYA 301
G H I++ GF++ E L+ S+ A Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
KCG V AR FD+M ++ W+ MI+GYAKN E+A+DLF M + + + S
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+ A +G+L+ + +YV KS ++ + TAL+DM+ +CG++E A VF+ E D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
+ WS++I G +HG +A++ + M G P DVTF +L+AC+H GLV +G E++
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 482 CMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
M+ GIEPR EHY C+VD+LGRAG L +A +FI+KM ++P + GALL ACKI+++
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 541 TLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
+ E L + P ++G+YV LSN+YA + WD + +R +M+EK + K G+S+IEI
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 601 NGKLQVFHVG-DKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIH 659
+GK+ F +G D+ HP +I + + + +++ IG+ +T D++ EEKE ++++H
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMH 554
Query: 660 SERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDG 719
SE++A+AYG++ T PGT +RI KNLR C +CH+V KLIS++ RE+IVRD NRFHHF++G
Sbjct: 555 SEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNG 614
Query: 720 LCSCGDYW 727
+CSC DYW
Sbjct: 615 VCSCRDYW 622
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 167/352 (47%), Gaps = 43/352 (12%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLV---------NGSSNLGHICYARKLF 111
+L+ + + L IH L+ + L + F+ ++L+ N +NL + YA +F
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNL--LGYAYGIF 74
Query: 112 DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+ +P++F++N +IR +S Y M + + PD TFP+++KA +E+
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS------ 225
+ H Q++R+GF DV+V+N LV MYA CG I A +F + R VVSWTS
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 226 -------------------------IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVS 260
+I+GYA+N +A+ LF M+ V + +VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
++ + + LE G + ++K L +L + +CG + A F+ + +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
+ W+++I G A +GHA +A+ F +MI+ P VT +A L++ G L
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTF-TAVLSACSHGGL 365
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/546 (40%), Positives = 328/546 (60%), Gaps = 16/546 (2%)
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
PD F N +++ Y + N A+ FD + + SW ++I+GYA+ GE +A LF M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF---YAKC 303
+ ++ W A++S Y + DLE+ G +++ TA Y K
Sbjct: 182 MEKN-EVSWNAMIS---GYIECGDLEKASHFFKVAPVRG-------VVAWTAMITGYMKA 230
Query: 304 GQVIVARSFFDQMKTS-SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA 362
+V +A + F M + +++ WNAMISGY +N E+ + LFR M+ I+P+S + SA
Sbjct: 231 KKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 363 ALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
L +++ +L+L + + VSKS +D+ T+LI MY KCG + A +F+ +KDV
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
+ W+AMI GY HG +A+ L+ M + P+ +TF+ +L ACNH+GLV G F
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 483 M-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVT 541
M R + +EP+ +HY+C+VDLLGRAG L++A I M P +V+G LL AC++H++V
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVE 470
Query: 542 LGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEIN 601
L E+AA+KL L+ N YVQL+N+YAS W+ VA VR M+E + K GYS IEI
Sbjct: 471 LAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIR 530
Query: 602 GKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSE 661
K+ F D+ HP D I+ +++ LE+++K G+ P E LH++ E+KE+ L HSE
Sbjct: 531 NKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSE 590
Query: 662 RIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLC 721
++AVA+G I G+ +++ KNLR C +CH IK IS++ +REIIVRD RFHHFKDG C
Sbjct: 591 KLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSC 650
Query: 722 SCGDYW 727
SCGDYW
Sbjct: 651 SCGDYW 656
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 149/311 (47%), Gaps = 20/311 (6%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEM-YGLMRREGVDPDGFTFPYVLKACT 165
A+ FD D WN +I GY+R E+ Y +M + V + Y+ C
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYI--ECG 200
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN-DRTVVSWT 224
+L + S +R V ++ Y K + +A +F + ++ +V+W
Sbjct: 201 DLE--KASHFFKVAPVR-----GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++ISGY +N + L+LF M ++ + L S + ++ L+ GR +H + K
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
++ L SL + Y KCG++ A F+ MK V+ WNAMISGYA++G+A++A+ LF
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLA-----QWMDDYVSKSEYASDIFVNTALID 399
REMI I+PD +T + LA G + + + DY K E D + T ++D
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY--KVEPQPDHY--TCMVD 429
Query: 400 MYAKCGNVESA 410
+ + G +E A
Sbjct: 430 LLGRAGKLEEA 440
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 2/227 (0%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFS-HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGV 150
T ++ G + A +F + + + ++ WNA+I GY ++ + ++++ M EG+
Sbjct: 221 TAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 151 DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV 210
P+ L C+EL +L +H V + DV L++MY KCG +G A
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
+F+ + + VV+W ++ISGYAQ+G A +AL LF +M + ++ DWI V+++ A
Sbjct: 341 LFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400
Query: 271 LEQGRSLHGCIIK-MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM 316
+ G + +++ E +PD + + G++ A M
Sbjct: 401 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/460 (42%), Positives = 296/460 (64%), Gaps = 2/460 (0%)
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
D+ G ++H +I+ GF + SL YA CG V A FD+M ++ WN++I+
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
G+A+NG EEA+ L+ EM ++ IKPD T+ S A A++G+L L + + Y+ K
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
++ + L+D+YA+CG VE A+ +FD +K+ + W+++I+G ++G G EAI L+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 450 QA-GVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGY 507
G+ P ++TF+G+L AC+H G+V+EG+E F MR + IEPR EH+ C+VDLL RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 508 LDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNL 567
+ +AY++I M ++P V +W LL AC +H L E+A ++ L+P ++G YV LSN+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 568 YASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRL 627
YAS + W V +R M G+ K G+S++E+ ++ F +GDKSHP+SD IY +++ +
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 628 ERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRAC 687
RL+ G+VP +V D+ EEKE + HSE+IA+A+ LIST + + + KNLR C
Sbjct: 363 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 422
Query: 688 VNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+CH IKL+SK+ REI+VRD +RFHHFK+G CSC DYW
Sbjct: 423 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 147/273 (53%), Gaps = 3/273 (1%)
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
+ D RL +H VIR GFG ++VQN L+ +YA CG++ A VFD + ++ +V+W S+
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
I+G+A+NG+ EAL L+ +M + +K D +VS++ A + L G+ +H +IK+G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
L YA+CG+V A++ FD+M + + W ++I G A NG +EA++LF+
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 347 M-ITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKC 404
M T + P +T A + G +K ++ + + I ++D+ A+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 405 GNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHG 436
G V+ A + + +V++W ++ +HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+ IH+ +I SG ++ L++ +N G + A K+FD+ D+ WN++I G++ +
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
+ +Y M +G+ PDGFT +L AC ++ L VH +I+ G ++
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L+ +YA+CG + A+ +FD + D+ VSWTS+I G A NG EA+ LF M +T+
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 253 LDW-IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE----------DEPDL--LISLTAF 299
L I V I+ A H ++K GFE EP + +
Sbjct: 188 LPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 300 YAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGHAEEA 340
A+ GQV A + M +V++W ++ +G ++ A
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ ++L + + V +S + S I+V +L+ +YA CG+V SA VFD+ EKD++ W+++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
I G+ +G+ EA+ LY M G+ P+ T + LL+AC G + G + M G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 489 EPRNEHYSCV-VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
RN H S V +DL R G +++A +M + VS W +L+
Sbjct: 121 -TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS-WTSLI 162
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/574 (36%), Positives = 335/574 (58%), Gaps = 2/574 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++VSG+ G + L++ S G A KLF S D WN +I GY +S
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L ++ + M GV PD TF +L + ++ + +H ++R+ D+F+ +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ Y KC + MA+ +F N VV +T++ISGY NG +++L +F + +
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ I LVSI+ G + L+ GR LHG IIK GF++ ++ ++ YAKCG++ +A F
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+++ ++ WN+MI+ A++ + A+D+FR+M I D V++ +A A A + S
Sbjct: 500 ERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + ++ K ASD++ + LIDMYAKCGN+++A VF EK+++ W+++I G
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 434 LHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPR 491
HG+ +++ L+H M ++G+ P+ +TF+ ++++C H G V EG F M +GI+P+
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLF 551
EHY+CVVDL GRAG L +AY+ + M P VWG LL AC++H++V L E A+ KL
Sbjct: 680 QEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Query: 552 SLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGD 611
LDP N+G+YV +SN +A++R W+ V VR LM+E+ + K GYS IEIN + +F GD
Sbjct: 740 DLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGD 799
Query: 612 KSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLH 645
+HP S IY+ + L L+ G++P LH
Sbjct: 800 VNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 214 bits (546), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 235/468 (50%), Gaps = 1/468 (0%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
+ +D + + + G+ N F+ + L+ G I KLFD D +WN ++ GY
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
++ + I+ + +MR + + P+ TF VL C L L +HG V+ G +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
++N L++MY+KCG A +F ++ V+W +ISGY Q+G E+L F +M ++
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
V D I S++ + ++LE + +H I++ + L +L Y KC V +A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
++ F Q + V+++ AMISGY NG +++++FR ++ I P+ +T+ S +
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
+LKL + + ++ K + + + A+IDMYAKCG + A +F+R S++D++ W++MI
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIE 489
AI+++ M +G+C + V+ L+AC + G + M +
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 574
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
S ++D+ + G L A + + K E + W ++++AC H
Sbjct: 575 SDVYSESTLIDMYAKCGNLKAAMN-VFKTMKEKNIVSWNSIIAACGNH 621
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 233/472 (49%), Gaps = 3/472 (0%)
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--EFSHPDVFLW 122
N R Q+H LIV+ + + + +++ + G K+F + + W
Sbjct: 47 NPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPW 106
Query: 123 NAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR 182
N+II + R+ L + Y M GV PD TFP ++KAC L +F+ + V
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 183 YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRL 242
G + FV + L+ Y + G I + +FD + + V W +++GYA+ G ++
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKG 226
Query: 243 FNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAK 302
F+ MR + + + ++ ++ G LHG ++ G + E + SL + Y+K
Sbjct: 227 FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 303 CGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA 362
CG+ A F M + + WN MISGY ++G EE++ F EMI+ + PD++T S
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 363 ALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
+ ++ +L+ + + Y+ + + DIF+ +ALID Y KC V A+ +F + + DV
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
++++AMI GY +G +++ ++ + + + PN++T + +L ++ G EL
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 466
Query: 483 MRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
+ G + R V+D+ + G ++ AY+ ++S VS W ++++ C
Sbjct: 467 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 2/309 (0%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR- 218
+L+AC+ R VH +I D + ++ MYA CG+ +F L+ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 219 -TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
++ W SIIS + +NG +AL + +M V D +V+A + + + L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
+ +G + + SL Y + G++ V FD++ ++WN M++GYAK G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
+ + F M I P++VT A + L + V S + + +L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+ MY+KCG + A +F S D + W+ MI GY G E++ ++ M +GV P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 458 VTFIGLLTA 466
+TF LL +
Sbjct: 341 ITFSSLLPS 349
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 3/275 (1%)
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM--KT 318
+++A + + L QG+ +H +I + + YA CG F ++ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 319 SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWM 378
SS+ WN++IS + +NG +A+ + +M+ + PD T A + + K ++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 379 DDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
D VS + FV ++LI Y + G ++ +FDR +KD ++W+ M+ GY G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 439 WEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCV 498
I + MR + PN VTF +L+ C L+ G +L + G++ + +
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 499 VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ + + G D A MS V+ W ++S
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVT-WNCMISG 314
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/601 (35%), Positives = 345/601 (57%), Gaps = 6/601 (0%)
Query: 133 NLFRNTIEMYGLMR-REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
N FR E++ ++ R T+ +++AC L R V+G ++ GF P+ ++
Sbjct: 101 NRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYM 160
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N ++ M+ KCG I AR +FD + +R + S+ SIISG+ G +EA LF M
Sbjct: 161 MNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELS 220
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ ++RA + + G+ LH C +K+G D + L Y+KCG + AR
Sbjct: 221 DCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARC 280
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
F+ M + + WN +I+GYA +G++EEA+ L +M + D T+ S ++
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L+L + + ++ + S+I NTAL+D Y+K G V++AR VFD+ K++I W+A++ G
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF-GIEP 490
Y HG+G +A+ L+ M A V PN VTF+ +L+AC +SGL +GWE+F M GI+P
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
R HY+C+++LLGR G LD+A FI + ++ V++W ALL+AC++ ++ LG A+KL
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL 520
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
+ + P G+YV + N+Y S A V + KGLS + +E+ + F G
Sbjct: 521 YGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSG 580
Query: 611 DKSHPRSD----EIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVA 666
D+ ++ +IY ++ L + E G+ + +L D++ +E+E HSE++A+A
Sbjct: 581 DRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIA 640
Query: 667 YGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDY 726
YGL++T L+IT+N R C NCH V++ IS + RE++VRDA+RFHHFK+G CSCG Y
Sbjct: 641 YGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGY 700
Query: 727 W 727
W
Sbjct: 701 W 701
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 190/364 (52%), Gaps = 6/364 (1%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R + +++ ++ +G + +++ +++ G I AR+LFDE +++ + +II G+
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+ E++ +M E D + TF +L+A L + +H ++ G +
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT 259
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
FV GL+ MY+KCG+I AR F+ + ++T V+W ++I+GYA +G + EAL L MR++
Sbjct: 260 FVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS 319
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
V +D L ++R + LE + H +I+ GFE E +L FY+K G+V A
Sbjct: 320 GVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTA 379
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
R FD++ ++I WNA++ GYA +G +AV LF +MI N+ P+ VT A L++
Sbjct: 380 RYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFL-AVLSACAY 438
Query: 370 GSLKLAQWMDDYVSKSEY---ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI-MW 425
L W + ++S SE +I++ + G ++ A R K + MW
Sbjct: 439 SGLSEQGW-EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMW 497
Query: 426 SAMI 429
+A++
Sbjct: 498 AALL 501
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/668 (33%), Positives = 365/668 (54%), Gaps = 6/668 (0%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF 120
S++ + H++ IH ++ G + L+ + G A +F + D+
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 311
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
WN+++ + + + + M G + TF L AC F ++HG V
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
+ G + + N LV+MY K G + +R V + R VV+W ++I GYA++ + +AL
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 241 RLFNQMRNTDVKLDWIALVSIVRA---YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
F MR V ++I +VS++ A GD+ LE+G+ LH I+ GFE + + SL
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLI 489
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
YAKCG + ++ F+ + ++I WNAM++ A +GH EE + L +M + + D
Sbjct: 490 TMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQF 549
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
+ A+A++ L+ Q + K + D F+ A DMY+KCG + + +
Sbjct: 550 SFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS 609
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
+ + W+ +I G HG E +H M + G+ P VTF+ LLTAC+H GLV +G
Sbjct: 610 VNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGL 669
Query: 478 ELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
+ + R FG+EP EH CV+DLLGR+G L +A FI KM ++P VW +LL++CKI
Sbjct: 670 AYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKI 729
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
H ++ G AA+ L L+P + YV SN++A++ W+ V +VR M K + K S
Sbjct: 730 HGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 789
Query: 597 VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENL 656
+++ K+ F +GD++HP++ EIY +++ +++ +KE G+V T L D + E+KE NL
Sbjct: 790 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 849
Query: 657 NIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHF 716
HSER+A+AY L+ST G+ +RI KNLR C +CHSV K +S+++ R I++RD RFHHF
Sbjct: 850 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 909
Query: 717 KDGLCSCG 724
+ GL G
Sbjct: 910 ERGLFGKG 917
Score = 212 bits (539), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 242/496 (48%), Gaps = 7/496 (1%)
Query: 50 DHGLNLDSFY-ASLID----NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
D G+ SF ASL+ + + R Q+H + SGL + ++ T +++ G +
Sbjct: 34 DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLV 93
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
+RK+F+E +V W +++ GYS I++Y MR EGV + + V+ +C
Sbjct: 94 SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
L D L + GQV++ G + V+N L++M GN+ A +FD +++R +SW
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
SI + YAQNG E+ R+F+ MR +++ + +++ G VD + GR +HG ++KM
Sbjct: 214 SIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM 273
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
GF+ + +L YA G+ + A F QM T +I WN++++ + +G + +A+ L
Sbjct: 274 GFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 333
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
MI+ + VT SA A + + + V S + + AL+ MY K
Sbjct: 334 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
G + +R V + +DV+ W+A+I GY +A+ + MR GV N +T + +L
Sbjct: 394 GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVL 453
Query: 465 TACNHSG-LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
+AC G L+ G L + G E + ++ + + G L + D +
Sbjct: 454 SACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRN 512
Query: 524 VSVWGALLSACKIHRH 539
+ W A+L+A H H
Sbjct: 513 IITWNAMLAANAHHGH 528
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 194/411 (47%), Gaps = 2/411 (0%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLVHGQV 180
WN ++ G R L+ +E + M G+ P F ++ AC FR VHG V
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
+ G DV+V ++ +Y G + +R VF+ + DR VVSWTS++ GY+ GE E +
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128
Query: 241 RLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFY 300
++ MR V + ++ ++ + G + D GR + G ++K G E + + SL +
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISML 188
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
G V A FDQM I WN++ + YA+NGH EE+ +F M + + +S TV
Sbjct: 189 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 248
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK 420
+ V K + + V K + S + V L+ MYA G A +VF + K
Sbjct: 249 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 308
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
D+I W++++ + G+ +A+ L +M +G N VTF L AC +G L
Sbjct: 309 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 368
Query: 481 HCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
+ G+ + +V + G+ G + ++ +++M V W AL+
Sbjct: 369 GLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 7/256 (2%)
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDL-EQGRS 276
R VSW +++SG + G LE + F +M + +K + S+V A G + +G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+HG + K G + + ++ Y G V +R F++M +V+ W +++ GY+ G
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK---LAQWMDDYVSKSEYASDIFV 393
EE +D+++ M + + S +L + G LK L + + V KS S + V
Sbjct: 124 PEEVIDIYKGMRGEGVGCNE---NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
+LI M GNV+ A +FD+ SE+D I W+++ Y +G E+ ++ MR+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 454 CPNDVTFIGLLTACNH 469
N T LL+ H
Sbjct: 241 EVNSTTVSTLLSVLGH 256
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 123/229 (53%), Gaps = 8/229 (3%)
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL-KL 374
M + + WN M+SG + G E ++ FR+M IKP S + S A + GS+ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ +V+KS SD++V+TA++ +Y G V +R VF+ +++V+ W+++++GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE---GWELFHCMRGFGIEPR 491
G+ E I++Y MR GV N+ + ++++C GL+++ G ++ + G+E +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESK 177
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
+ ++ +LG G +D A +MS +S W ++ +A + H+
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSERDTIS-WNSIAAAYAQNGHI 225
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 337/572 (58%), Gaps = 4/572 (0%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
++ A + L L+H +V++ F+ + LV Y + G+ A +FD + +R
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDV--KLDWIALVSIVRAYGDVDDLEQGRSL 277
+VSW S+ISGY+ G + + ++M ++V + + + +S++ A E+GR +
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
HG ++K G +E ++ + +Y K G + + F+ + +++ WN MI + +NG A
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLA 216
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E+ + F +PD T + + +G ++LAQ + + ++ + + TAL
Sbjct: 217 EKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL 276
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+D+Y+K G +E + VF + D + W+AM+ Y HG G +AI + M G+ P+
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 458 VTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIM 516
VTF LL AC+HSGLV EG F M + + I+PR +HYSC+VDLLGR+G L AY I
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 517 KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDH 576
+M +EP VWGALL AC++++ LG AA++LF L+P + +YV LSN+Y++S LW
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 577 VAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLK-EIG 635
+ +R LM++KGL + G S IE K+ F VGD SHP S++I +++ + +++K E+G
Sbjct: 457 ASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMG 516
Query: 636 FVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIK 695
+ TE VLHD+ + KEE +N HSE+IA+A+GL+ +P + I KNLR C +CH K
Sbjct: 517 YKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAK 576
Query: 696 LISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
IS + +R II+RD+ RFHHF DG CSC DYW
Sbjct: 577 AISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 174/360 (48%), Gaps = 6/360 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H +++ S +GF+ +LV LGH A KLFDE D+ WN++I GYS
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 135 FRNTIEMYGLM--RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
E+ M G P+ TF ++ AC +HG V+++G +V V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N + Y K G++ + +F+ L+ + +VSW ++I + QNG A + L FN R +
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
D ++++R+ D+ + + +HG I+ GF + +L Y+K G++ + +
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F ++ + + W AM++ YA +G +A+ F M+ I PD VT A + G +
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLV 352
Query: 373 KLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESAR-IVFDRTSEKDVIMWSAMI 429
+ + + +SK Y D ++ + ++D+ + G ++ A ++ + E +W A++
Sbjct: 353 EEGKHYFETMSK-RYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALL 411
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 5/176 (2%)
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS 418
V S A S++L + + V KS F+ L+ Y + G+ A +FD
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 419 EKDVIMWSAMIMGY---GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
E+D++ W+++I GY G G+ +E ++ + + G PN+VTF+ +++AC + G E
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRM-MISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 476 GWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
G + + FG+ + + ++ G+ G L + +SI+ VS W ++
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS-WNTMI 207
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 339/591 (57%), Gaps = 40/591 (6%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM---ARVVFDGLNDRTVVSWTSIISGYAQ 232
+HG V+R G ++ L+ K G + M AR V + + R WT++I GYA
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLG-VPMDPYARRVIEPVQFRNPFLWTAVIRGYAI 126
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG--------CIIKM 284
G+ EA+ ++ MR ++ ++++A G + DL GR H C + +
Sbjct: 127 EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYV 186
Query: 285 G-------------------FEDEPDLLI----SLTAFYAKCGQVIVARSFFDQMKTSSV 321
G F++ P+ + L A YA+ G + A F+ + T +
Sbjct: 187 GNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+ W AM++G+A+N +EA++ F M I+ D VTV A AQ+G+ K A
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 382 VSKSEYASD--IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGW 439
KS Y+ + + +ALIDMY+KCGNVE A VF + K+V +S+MI+G HG+
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 440 EAINLYHAM-RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSC 497
EA++L+H M Q + PN VTF+G L AC+HSGLV +G ++F M + FG++P +HY+C
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYN 557
+VDLLGR G L +A + I MS+EP VWGALL AC+IH + + E AA+ LF L+P
Sbjct: 427 MVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDI 486
Query: 558 TGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS-VIEINGKLQVFHVGDKSHPR 616
G+Y+ LSN+YAS+ W V VR L++EKGL K S V++ NG++ F G+ +HP
Sbjct: 487 IGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPM 546
Query: 617 SDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGT 676
S++I ++++ L RL +G+ P SV +D++ K L H+E++A+A+ L++T +
Sbjct: 547 SNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDS 606
Query: 677 ILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ I KNLR C++CH ++L S++ + II+RD RFHHF+ G CSCGD+W
Sbjct: 607 TITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 200/415 (48%), Gaps = 42/415 (10%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHIC--YARKLFDEFSHPD 118
S +D+ + + QIH ++ GL + +++TKL+ + LG YAR++ + +
Sbjct: 54 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHG 178
FLW A+IRGY+ F I MYG MR+E + P FTF +LKAC + D L H
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 179 QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII----------- 227
Q R V+V N ++ MY KC +I AR VFD + +R V+SWT +I
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 228 --------------------SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
+G+AQN + EAL F++M + ++ D + + + A
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIMWN 325
+ + K G+ ++I +L Y+KCG V A + F M +V ++
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYS 353
Query: 326 AMISGYAKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
+MI G A +G A+EA+ LF M+T+ IKP++VT A +A + G + + + D + +
Sbjct: 354 SMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQ 413
Query: 385 S---EYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLH 435
+ + D + T ++D+ + G ++ A ++ + E +W A++ +H
Sbjct: 414 TFGVQPTRDHY--TCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIH 466
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/631 (34%), Positives = 335/631 (53%), Gaps = 25/631 (3%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A KLFDE S + +I Y+ + + ++ M G P + +LK+
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
+H VIR G + ++ G+V MY KCG + A+ VFD + + V+ T +
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGL 256
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
+ GY Q G A +AL+LF + V+ D +++A +++L G+ +H C+ K+G
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL 316
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
E E + L FY KC A F +++ + + W+A+ISGY + EEAV F+
Sbjct: 317 ESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 347 MITRN------IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
+ ++N S+ + LA +G Q D + +S S + +ALI M
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIG----GQVHADAIKRSLIGSQ-YGESALITM 431
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
Y+KCG ++ A VF+ D++ W+A I G+ +G EA+ L+ M G+ PN VTF
Sbjct: 432 YSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTF 491
Query: 461 IGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS 519
I +LTAC+H+GLV +G M R + + P +HY C++D+ R+G LD+A F+ M
Sbjct: 492 IAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMP 551
Query: 520 IEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAH 579
EP W LS C H+++ LGE A ++L LDP +T YV NLY + W+ A
Sbjct: 552 FEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAE 611
Query: 580 VRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPH 639
+ LM E+ L K+L S I+ GK+ F VGDK HP++ EIY +++ + GF+
Sbjct: 612 MMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD------GFM-- 663
Query: 640 TESVLHDLNYEEKEENLNIHSERIAVAYGLIS---TAPGTILRITKNLRACVNCHSVIKL 696
E + N E+ E L HSER+A+A+GLIS AP I ++ KNLRAC +CH K
Sbjct: 664 -EGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPI-KVFKNLRACPDCHEFAKH 721
Query: 697 ISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+S + EI++RD+ RFHHFK+G CSC DYW
Sbjct: 722 VSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 6/385 (1%)
Query: 57 SFYASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE 113
S Y +L+ + + R LD QIH +I +GL N + T +VN G + A+++FD+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 114 FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
+ ++ GY+++ R+ ++++ + EGV+ D F F VLKAC L + L
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
+H V + G +V V LV Y KC + A F + + VSW++IISGY Q
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 234 GEALEALRLFNQMRNTDVK-LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
+ EA++ F +R+ + L+ SI +A + D G +H IK
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
+L Y+KCG + A F+ M ++ W A ISG+A G+A EA+ LF +M++ +
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 353 KPDSVTVRSAALASAQVGSLKLAQ-WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA- 410
KP+SVT + A + G ++ + +D + K A I +ID+YA+ G ++ A
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 411 RIVFDRTSEKDVIMWSAMIMGYGLH 435
+ + + E D + W + G H
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 192/422 (45%), Gaps = 4/422 (0%)
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL 172
+ SH + N + S+ E M + GV +++ + +AC EL
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 173 SCLVHGQVIRYGF-GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYA 231
L+H + +R G P V +QN ++ MY +C ++ A +FD +++ VS T++IS YA
Sbjct: 102 GRLLHDR-MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYA 160
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+ G +A+ LF+ M + K +++++ + L+ GR +H +I+ G
Sbjct: 161 EQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTS 220
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
+ + Y KCG ++ A+ FDQM + ++ GY + G A +A+ LF +++T
Sbjct: 221 IETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG 280
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
++ DS A A + L L + + V+K S++ V T L+D Y KC + ESA
Sbjct: 281 VEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESAC 340
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP-NDVTFIGLLTACNHS 470
F E + + WSA+I GY Q EA+ + ++R N T+ + AC+
Sbjct: 341 RAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL 400
Query: 471 GLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
G ++ + S ++ + + G LD A + M P + W A
Sbjct: 401 ADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 531 LS 532
+S
Sbjct: 460 IS 461
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 338/577 (58%), Gaps = 13/577 (2%)
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG------MARVVF 212
Y+LK C + +F+ VH + I+ V AKC + G A +F
Sbjct: 35 YLLKRCHNIDEFKQ---VHARFIKLSLFYSSSFSASSV--LAKCAHSGWENSMNYAASIF 89
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
G++D + ++I GY EAL +N+M + D +++A + +
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
+G+ +HG + K+G E + + SL Y +CG++ ++ + F+++++ + W++M+S A
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 333 KNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
G E + LFR M + N+K + + SA LA A G+L L + ++ ++ +I
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
V T+L+DMY KCG ++ A +F + +++ + +SAMI G LHG+G A+ ++ M +
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG-IEPRNEHYSCVVDLLGRAGYLDQ 510
G+ P+ V ++ +L AC+HSGLV+EG +F M G +EP EHY C+VDLLGRAG L++
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYAS 570
A + I + IE +W LS C++ +++ LG+ AA++L L +N G Y+ +SNLY+
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERR 630
++WD VA R + KGL + G+S++E+ GK F D+SHP+ EIY + ++E +
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQ 509
Query: 631 LKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNC 690
LK G+ P +L +++ EEK+E L HS+++A+A+GL+ T PG+I++I +NLR C +C
Sbjct: 510 LKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDC 569
Query: 691 HSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
H+ K IS + EREI+VRD NRFH FK G CSC DYW
Sbjct: 570 HTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 172 bits (436), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 11/331 (3%)
Query: 106 YARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
YA +F P F +N +IRGY F + Y M + G +PD FT+P +LKACT
Sbjct: 84 YAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 143
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
L R +HGQV + G DVFVQN L+ MY +CG + ++ VF+ L +T SW+S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 226 IISGYAQNGEALEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++S A G E L LF M T++K + +VS + A + L G S+HG +++
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
E + SL Y KCG + A F +M+ + + ++AMISG A +G E A+ +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLK-----LAQWMDDYVSKSEYASDIFVNTALID 399
+MI ++PD V S A + G +K A+ + + K E ++ + L+D
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKE--GKVEPTAEHY--GCLVD 379
Query: 400 MYAKCGNVESARIVFDRTS-EKDVIMWSAMI 429
+ + G +E A EK+ ++W +
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 114/242 (47%), Gaps = 5/242 (2%)
Query: 49 LDHGLNLDSF-YASLIDNSTHKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
+ G D+F Y L+ T + + QIH Q+ GL+ + F+ L+N G +
Sbjct: 124 MQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEM 183
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY-GLMRREGVDPDGFTFPYVLKA 163
+ +F++ W++++ + ++ + ++ G+ + + L A
Sbjct: 184 ELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLA 243
Query: 164 CTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSW 223
C L +HG ++R ++ VQ LV MY KCG + A +F + R +++
Sbjct: 244 CANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTY 303
Query: 224 TSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK 283
+++ISG A +GE ALR+F++M ++ D + VS++ A +++GR + ++K
Sbjct: 304 SAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLK 363
Query: 284 MG 285
G
Sbjct: 364 EG 365
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/603 (36%), Positives = 340/603 (56%), Gaps = 36/603 (5%)
Query: 161 LKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV 220
L+ C + +H +++ G + N LV +Y KCG A VFD + R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
++W S+++ Q + + L +F+ + ++ ++ D ++V+A ++ ++ GR +H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
I + ++ + SL YAKCG + A++ FD ++ + I W AM+SGYAK+G EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 340 AVDLFREMITRNIKP--------------------------------DSVTVRSAALASA 367
A++LFR + +N+ D + + S A A
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
+ + + + V + S +F++ ALIDMYAKC +V +A+ +F R +DV+ W++
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGF 486
+I+G HGQ +A+ LY M GV PN+VTF+GL+ AC+H G V +G ELF M + +
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYA 546
GI P +HY+C++DLLGR+G LD+A + I M P W ALLSACK +G
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 547 AKKLFS-LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQ 605
A L S + Y+ LSN+YAS+ LW V+ R + E + KD G+S +E+ + +
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489
Query: 606 VFHVGDKSHPRSDEIYNEIQRLERRLK-EIGFVPHTESVLHDLNYEEKEENLNIHSERIA 664
VF+ G+ SHP ++I+ +++LE ++ G+VP T +LHD++ +EKE+ L HSER A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549
Query: 665 VAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCG 724
VAYGL+ PGT +RI KNLR C +CH V+K IS++ EREIIVRDA R+HHFK G CSC
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609
Query: 725 DYW 727
D+W
Sbjct: 610 DFW 612
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H Q+H IVS ++ + + LV+ + G + A+ +FD + W A++ GY+
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 182
Query: 131 RSNLFRNTIEMYGL-------------------------------MRREGVDP-DGFTFP 158
+S +E++ + MRRE VD D
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 242
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
++ AC L VHG VI GF VF+ N L+ MYAKC ++ A+ +F + R
Sbjct: 243 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
VVSWTS+I G AQ+G+A +AL L++ M + VK + + V ++ A V +E+GR L
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 279 GCIIK-MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGH 336
+ K G L + G + A + M W A++S + G
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 337 AEEAVDLFREMIT--RNIKPDSVTVRSAALASAQV 369
+ + + +++ + P + + S ASA +
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/666 (34%), Positives = 359/666 (53%), Gaps = 82/666 (12%)
Query: 57 SFYASLIDNSTHKR----HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD 112
S +A L+D+ + ++ +H +I SG + F+ +L++ S G + R++FD
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 113 EFSHPDVFLWNAIIRGYSR-------SNLFRNTIE------------------------M 141
+ +++ WN+++ G ++ +LFR+ E
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 142 YGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAK 201
+ +M +EG + ++F VL AC+ L D VH + + F DV++ + LV MY+K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 202 CGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSI 261
CGN+ A+ VFD + DR VVSW S+I+ + QNG A+EAL +F M + V+ D + L S+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 262 VRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS--LTAFYAKCGQVIVARSFFDQMKTS 319
+ A + ++ G+ +HG ++K + D+++S YAKC ++ AR FD M
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKND-KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 320 SVIM-------------------------------WNAMISGYAKNGHAEEAVDLFREMI 348
+VI WNA+I+GY +NG EEA+ LF +
Sbjct: 319 NVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK------SEYASDIFVNTALIDMYA 402
++ P + + A A + L L +V K S DIFV +LIDMY
Sbjct: 379 RESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 403 KCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
KCG VE +VF + E+D + W+AMI+G+ +G G EA+ L+ M ++G P+ +T IG
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIG 498
Query: 463 LLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
+L+AC H+G V EG F M R FG+ P +HY+C+VDLLGRAG+L++A I +M ++
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQ 558
Query: 522 PGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVR 581
P +WG+LL+ACK+HR++TLG+Y A+KL ++P N+G YV LSN+YA W+ V +VR
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVR 618
Query: 582 VLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ------RLERRLKEIG 635
MR++G++K G S I+I G VF V DKSHPR +I++ + R E+ EIG
Sbjct: 619 KSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIG 678
Query: 636 FVPHTE 641
+ E
Sbjct: 679 SLSSEE 684
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/678 (34%), Positives = 362/678 (53%), Gaps = 47/678 (6%)
Query: 56 DSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
+S + SLI L +H Q++ G+ + + +LV+ SS L Y+ +F
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQILRRGVL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR-LSC 174
+ F+ NA+IRG + + F +++ + LM R GV PD TFP+VLK+ ++L FR L
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL-GFRWLGR 146
Query: 175 LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGY 230
+H ++ D FV+ LV MYAK G + A VF+ DR +++ W +I+GY
Sbjct: 147 ALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGY 206
Query: 231 AQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
+ + A LF M R G L +G
Sbjct: 207 CRAKDMHMATTLFRSMPE--------------RNSGSWSTLIKG---------------- 236
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
Y G++ A+ F+ M +V+ W +I+G+++ G E A+ + EM+ +
Sbjct: 237 ---------YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 351 NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
+KP+ T+ + A ++ G+L + Y+ + D + TAL+DMYAKCG ++ A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 411 RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
VF + KD++ W+AMI G+ +HG+ +AI + M +G P++V F+ +LTAC +S
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 471 GLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGA 529
V G F MR + IEP +HY VVDLLGRAG L++A++ + M I P ++ W A
Sbjct: 408 SEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAA 467
Query: 530 LLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGL 589
L ACK H+ E ++ L LDP G Y+ L +AS V R+ ++++
Sbjct: 468 LYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIK 527
Query: 590 SKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNY 649
+ LG+S IE++G+L F GD SH + EI ++ + + G+ P + +HD+
Sbjct: 528 ERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEE 587
Query: 650 EEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRD 709
EEKE IHSE++A+ G + TAPGT +RI KNLR C +CHS++K +SK+ +R+I++RD
Sbjct: 588 EEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRD 647
Query: 710 ANRFHHFKDGLCSCGDYW 727
A +FHHFKDG CSCGDYW
Sbjct: 648 ARQFHHFKDGRCSCGDYW 665
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/621 (37%), Positives = 338/621 (54%), Gaps = 81/621 (13%)
Query: 118 DVFLWNAIIRG--YSRSNLFRNT-IEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC 174
+ FLWN IIR ++ S+ R++ I +Y MR V PD TFP++L + L L
Sbjct: 23 ESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQ 82
Query: 175 LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG 234
H Q++ +G D FV+ TS+++ Y+ G
Sbjct: 83 RTHAQILLFGLDKDPFVR-------------------------------TSLLNMYSSCG 111
Query: 235 EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
+ A R+F+ + D+ A S+V AY
Sbjct: 112 DLRSAQRVFDDSGSKDLP----AWNSVVNAY----------------------------- 138
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN--- 351
AK G + AR FD+M +VI W+ +I+GY G +EA+DLFREM
Sbjct: 139 ------AKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 352 --IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
++P+ T+ + A ++G+L+ +W+ Y+ K DI + TALIDMYAKCG++E
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 410 ARIVFDRT-SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA-GVCPNDVTFIGLLTAC 467
A+ VF+ S+KDV +SAMI ++G E L+ M + + PN VTF+G+L AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 468 NHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSV 526
H GL+ EG F M FGI P +HY C+VDL GR+G + +A FI M +EP V +
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 527 WGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMRE 586
WG+LLS ++ + E A K+L LDP N+G YV LSN+YA + W V +R M
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 587 KGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHD 646
KG++K G S +E+ G + F VGD+S S+ IY + + +RL+E G+V T+ VL D
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLD 492
Query: 647 LNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREII 706
LN ++KE L+ HSE++A+A+ L+ T PGT +RI KNLR C +CH V+K+ISKL REI+
Sbjct: 493 LNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIV 552
Query: 707 VRDANRFHHFKDGLCSCGDYW 727
VRD NRFHHF+DG CSC D+W
Sbjct: 553 VRDCNRFHHFRDGSCSCRDFW 573
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 136/306 (44%), Gaps = 40/306 (13%)
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
N H + H Q+++ GL + F+ T L+N S+ G + A+++FD+ D+ WN+
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNS 133
Query: 125 IIRGYSRSNLF------------RNTIEMYGLMR--------REGVD------------- 151
++ Y+++ L RN I L+ +E +D
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 152 ---PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
P+ FT VL AC L VH + +Y D+ + L+ MYAKCG++ A
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 209 RVVFDGL-NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYG 266
+ VF+ L + + V +++++I A G E +LF++M +D + + + V I+ A
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 267 DVDDLEQGRSLHGCII-KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS-VIMW 324
+ +G+S +I + G + Y + G + A SF M V++W
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 325 NAMISG 330
+++SG
Sbjct: 374 GSLLSG 379
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 349/639 (54%), Gaps = 36/639 (5%)
Query: 94 LVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
+++ + LG++ A L DE PD+ WN+++ GY+ L ++ I + M+ G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
+ P + +L+A E +L +HG ++R DV+V+ L+ MY K G + AR
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
+VFD ++ + +V+W S++SG + +A L +M +K D I S+ Y +
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
E+ + G + + G +V+ W A+ S
Sbjct: 341 KPEKALDVIGKMKEKGV-------------------------------APNVVSWTAIFS 369
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
G +KNG+ A+ +F +M + P++ T+ + + L + + + +
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
D +V TAL+DMY K G+++SA +F K + W+ M+MGY + G+G E I + M
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 450 QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYL 508
+AG+ P+ +TF +L+ C +SGLV+EGW+ F MR +GI P EH SC+VDLLGR+GYL
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 509 DQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLY 568
D+A+DFI MS++P ++WGA LS+CKIHR + L E A K+L L+P+N+ +Y+ + NLY
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 569 ASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLE 628
++ W+ V +R LMR + +S I+I+ + +F+ K+HP +IY E+ +L
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
Query: 629 RRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACV 688
+K+ G+VP T + D++ EKE+ L H+E++A+ YGLI +R+ KN C
Sbjct: 670 SEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICS 729
Query: 689 NCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ H+V K +S L REI++++ R HHF+DG CSC D W
Sbjct: 730 DSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 184/403 (45%), Gaps = 71/403 (17%)
Query: 172 LSCLVHGQVIRYGF-GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGY 230
L +HG +I+ G D V + + Y +C ++G A +FD + R ++W I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 231 AQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
++G +A+ LF +M+ + K +V +++ + + +GR +HG ++++G E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
+ SL Y++ G++ ++R F+ MK ++ WN+++S Y K G+ ++A+ L EM
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 351 NIKPDSVT-----------------------------------VRSAALASAQVGSLKLA 375
+KPD VT + S A A+ G LKL
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK--------------- 420
+ + Y+ +++ D++V T LIDMY K G + AR+VFD K
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 421 --------------------DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
D I W+++ GY G+ +A+++ M++ GV PN V++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLG 503
+ + C+ +G R ++F M+ G+ P S ++ +LG
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILG 407
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/554 (37%), Positives = 318/554 (57%), Gaps = 34/554 (6%)
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT--DVKLDWIALVSIVRAY 265
A + D T+ + S+I + ++ ++ + ++ ++ D+K D + +V+A
Sbjct: 59 ANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQAC 118
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA------------------------ 301
+ E G +HG I+ GF+++P + L + YA
Sbjct: 119 TGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRT 178
Query: 302 -------KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
+CG V+ AR F+ M I WNAMISGYA+ G + EA+++F M +K
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 355 DSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF 414
+ V + S A Q+G+L +W Y+ +++ + + T L+D+YAKCG++E A VF
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF 298
Query: 415 DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVR 474
EK+V WS+ + G ++G G + + L+ M+Q GV PN VTF+ +L C+ G V
Sbjct: 299 WGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVD 358
Query: 475 EGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
EG F MR FGIEP+ EHY C+VDL RAG L+ A I +M ++P +VW +LL A
Sbjct: 359 EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Query: 534 CKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDL 593
++++++ LG A+KK+ L+ N G YV LSN+YA S WD+V+HVR M+ KG+ K
Sbjct: 419 SRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQP 478
Query: 594 GYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKE 653
G SV+E+NG++ F VGDKSHP+ +I + + RRL+ G+ T V+ D++ EEKE
Sbjct: 479 GCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKE 538
Query: 654 ENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRF 713
+ L +HSE+ A+A+G++S +RI KNLR C +CH V +ISK+ REIIVRD NRF
Sbjct: 539 DALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRF 598
Query: 714 HHFKDGLCSCGDYW 727
HHFKDG CSC +W
Sbjct: 599 HHFKDGHCSCNGFW 612
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 203/407 (49%), Gaps = 39/407 (9%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGS--SNLGHICYARKLFDEFSHPD 118
+L+D+ + + QIH +L V G + L+ V S+ ++ YA ++ D P
Sbjct: 11 ALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPT 70
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD--PDGFTFPYVLKACTELLDFRLSCLV 176
+F N++IR + +S + + + Y + G D PD +T ++++ACT L V
Sbjct: 71 LFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQV 130
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYA-------------------------------KCGNI 205
HG IR GF D VQ GL+++YA +CG++
Sbjct: 131 HGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 206 GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
AR +F+G+ +R ++W ++ISGYAQ GE+ EAL +F+ M+ VK++ +A++S++ A
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWN 325
+ L+QGR H I + + L +L YAKCG + A F M+ +V W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
+ ++G A NG E+ ++LF M + P++VT S + VG + Q D + ++
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM-RN 369
Query: 386 EYASDIFVN--TALIDMYAKCGNVESARIVFDRTSEKD-VIMWSAMI 429
E+ + + L+D+YA+ G +E A + + K +WS+++
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 37 SSSVLNLGHVVSLDHGLNLDSF-YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLIT 92
S LN+ H++ L+ G+ ++ S++ T LDQ H+ + + +K L T
Sbjct: 221 SREALNVFHLMQLE-GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLAT 279
Query: 93 KLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDP 152
LV+ + G + A ++F +V+ W++ + G + + +E++ LM+++GV P
Sbjct: 280 TLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTP 339
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG--PDVFVQNGLVAMYAKCGNIGMARV 210
+ TF VL+ C+ ++ F H +R FG P + LV +YA+ G + A
Sbjct: 340 NAVTFVSVLRGCS-VVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVS 398
Query: 211 VFDGLNDRT-VVSWTSII 227
+ + + W+S++
Sbjct: 399 IIQQMPMKPHAAVWSSLL 416
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/538 (36%), Positives = 327/538 (60%), Gaps = 5/538 (0%)
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVS---WTSIISGYAQNGEALEALRLFNQMRNTDV 251
L+ +++ C + +AR +FD + D ++++ W ++ GY++NG +AL ++ M + +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ ++ ++A D+ DL GR +H I+K + + + L Y + G AR
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
FD M +V+ WN++IS +K E +LFR+M I T+ + A ++V +
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA 352
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L + + + KS+ D+ + +L+DMY KCG VE +R VFD KD+ W+ M+
Sbjct: 353 LLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEP 490
Y ++G E INL+ M ++GV P+ +TF+ LL+ C+ +GL G LF M+ F + P
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
EHY+C+VD+LGRAG + +A I M +P S+WG+LL++C++H +V++GE AAK+L
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKEL 532
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
F L+P+N G+YV +SN+YA +++WD+V +R +M+++G+ K+ G S +++ K+Q+F G
Sbjct: 533 FVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Query: 611 DKSHPRSDEIYNEI-QRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGL 669
R+ + Y ++ L+ +++ G+ P+T VLHD++ E K + HSER+A Y L
Sbjct: 593 GGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSL 652
Query: 670 ISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
I T G +RITKNLR C +CHS +K++S++ R I++RD RFHHF DG+CSC DYW
Sbjct: 653 IHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 180/359 (50%), Gaps = 5/359 (1%)
Query: 84 LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF---LWNAIIRGYSRSNLFRNTIE 140
L+HN L++KL+ S + ARK+FD+ + + +W A+ GYSR+ R+ +
Sbjct: 163 LRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALI 222
Query: 141 MYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYA 200
+Y M ++P F+ LKAC +L D R+ +H Q+++ D V N L+ +Y
Sbjct: 223 VYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYM 282
Query: 201 KCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVS 260
+ G AR VFDG+++R VV+W S+IS ++ E LF +M+ + W L +
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
I+ A V L G+ +H I+K + + LL SL Y KCG+V +R FD M T
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDD 380
+ WN M++ YA NG+ EE ++LF MI + PD +T + + G + + +
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 381 YVSKSEYASDIFVNTA-LIDMYAKCGNV-ESARIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
+ S + A L+D+ + G + E+ +++ + +W +++ LHG
Sbjct: 463 RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+IH Q++ S K + L+ L++ G + Y+R++FD D+ WN ++ Y+ +
Sbjct: 358 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAING 417
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE--LLDFRLSCLVHGQVIRYGFGPDVFV 191
I ++ M GV PDG TF +L C++ L ++ LS L + P +
Sbjct: 418 NIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLS-LFERMKTEFRVSPALEH 476
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVS-WTSIISGYAQNG 234
LV + + G I A V + + + S W S+++ +G
Sbjct: 477 YACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/585 (34%), Positives = 332/585 (56%), Gaps = 44/585 (7%)
Query: 186 GPDVFVQNGLVAMYAKCGNIGMARVVFD--GLNDRTVVSWTSIISGYAQNGEALEALRLF 243
P ++ N L YA G + A+ +FD L+++ V WT+++S +++ G + +++LF
Sbjct: 40 APRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLF 99
Query: 244 NQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC 303
+MR V++D +++V + ++DL + HG +KMG + +L Y KC
Sbjct: 100 VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 304 GQVIVARSFFDQMKTSSVI-------------------------------MWNAMISGYA 332
G V + F++++ SV+ W M++GY
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 333 KNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA--- 388
G E ++L EM+ R + VT+ S A AQ G+L + +W+ Y K E
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 389 ----SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
D+ V TAL+DMYAKCGN++S+ VF +++V+ W+A+ G +HG+G I++
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGR 504
+ M + V P+D+TF +L+AC+HSG+V EGW FH +R +G+EP+ +HY+C+VDLLGR
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGR 398
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
AG +++A + +M + P V G+LL +C +H V + E ++L + P NT + + +
Sbjct: 399 AGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILM 458
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
SN+Y + D +R +R++G+ K G S I +N + F GD+SHPR+ EIY ++
Sbjct: 459 SNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Query: 625 QRLERRLKEIGFVPHTESVL--HDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITK 682
+ R++ G+VP ++ + + EEKE+ L HSE++AV +GL+ T P T L + K
Sbjct: 519 NEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFK 578
Query: 683 NLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
NLR C +CHS +K++SK+ +REII+RD NRFH FK G CSC DYW
Sbjct: 579 NLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 198/460 (43%), Gaps = 85/460 (18%)
Query: 62 LIDNSTHKRHL---DQIHNQLIVSGLKH--NGFLITKLVNGSSNLGHICYARKLFDE--F 114
L+ + H+ L ++H L SGLK +L L ++ G + A+KLFDE
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 115 SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC 174
S D W ++ +SR L N+++++ MRR+ V+ D + + C +L D +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 175 LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI-------- 226
HG ++ G V V N L+ MY KCG + + +F+ L +++VVSWT +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 227 -----------------------ISGYAQNGEALEALRLFNQMR-NTDVKLDWIALVSIV 262
++GY G E L L +M L+++ L S++
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 263 RAYGDVDDLEQGRSLHGCIIK----MGFEDEPDLLISLTAF---YAKCGQVIVARSFFDQ 315
A +L GR +H +K MG E D ++ TA YAKCG + + + F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
M+ +V+ WNA+ SG A +G +D+F +MI R +KPD +T +A L++ +
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTF-TAVLSACSHSGIVDE 369
Query: 376 QWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
W + S Y + V+ ++D+ + G +E A I+
Sbjct: 370 GW-RCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEIL-------------------- 408
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
MR+ V PN+V LL +C+ G V
Sbjct: 409 --------------MREMPVPPNEVVLGSLLGSCSVHGKV 434
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/557 (38%), Positives = 321/557 (57%), Gaps = 19/557 (3%)
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN-GEALEALRLFNQM- 246
+F+ ++ + + ++ A VFD + + + W ++I A + EA L+ +M
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQV 306
+ D +++A + +G+ +H I+K GF + + L Y CG +
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCL 202
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
+AR FD+M S++ WN+MI + G + A+ LFREM R+ +PD T++S A
Sbjct: 203 DLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSAC 261
Query: 367 AQVGSLKLAQWMDDYVSKS---EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
A +GSL L W ++ + + A D+ V +LI+MY KCG++ A VF ++D+
Sbjct: 262 AGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLA 321
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAM--RQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
W+AMI+G+ HG+ EA+N + M ++ V PN VTF+GLL ACNH G V +G + F
Sbjct: 322 SWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFD 381
Query: 482 CM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC-KIHRH 539
M R + IEP EHY C+VDL+ RAGY+ +A D +M M ++P +W +LL AC K
Sbjct: 382 MMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGAS 441
Query: 540 VTLGEYAAKKLFSLDPYN-------TGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
V L E A+ + N +G YV LS +YAS+ W+ V VR LM E G+ K+
Sbjct: 442 VELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKE 501
Query: 593 LGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVP-HTESVLHD-LNYE 650
G S IEING F GD SHP++ +IY +++ ++ RL+ IG++P +++ L D N
Sbjct: 502 PGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDG 561
Query: 651 EKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDA 710
KE +L +HSER+A+A+GLI+ P T +RI KNLR C +CH V KLISK+ EIIVRD
Sbjct: 562 SKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDR 621
Query: 711 NRFHHFKDGLCSCGDYW 727
RFHHFKDG CSC DYW
Sbjct: 622 VRFHHFKDGSCSCLDYW 638
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 194/381 (50%), Gaps = 13/381 (3%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNG---FLITKLVNGSSNLGHICYARKLFDEFSHP 117
SL + + L Q+H + + FL K++ SS+ + YA ++FD +
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMY--GLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
F+WN +IR + + M ++ R PD TFP+VLKAC + F
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
VH Q++++GFG DV+V NGL+ +Y CG + +AR VFD + +R++VSW S+I + GE
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII-KMGFEDEPDLLI 294
AL+LF +M+ + + D + S++ A + L G H ++ K + D+L+
Sbjct: 233 YDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 295 --SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-- 350
SL Y KCG + +A F M+ + WNAMI G+A +G AEEA++ F M+ +
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 351 NIKPDSVTVRSAALASAQVGSL-KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV-E 408
N++P+SVT +A G + K Q+ D V + ++D+ A+ G + E
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 409 SARIVFDRTSEKDVIMWSAMI 429
+ +V + D ++W +++
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLL 432
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 24/292 (8%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H Q++ G + ++ L++ + G + ARK+FDE + WN++I R
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR---YGFGPDVF 190
+ + ++++ M+R +PDG+T VL AC L L H ++R DV
Sbjct: 232 EYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM--RN 248
V+N L+ MY KCG++ MA VF G+ R + SW ++I G+A +G A EA+ F++M +
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL--------LISLTAFY 300
+V+ + + V ++ A + +GR +++ + EP L LI+ +
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-DYCIEPALEHYGCIVDLIARAGYI 409
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
+ ++++ MK +VI W +++ K G + E E I RNI
Sbjct: 410 TEAIDMVMSMP----MKPDAVI-WRSLLDACCKKGASVE----LSEEIARNI 452
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/626 (34%), Positives = 337/626 (53%), Gaps = 37/626 (5%)
Query: 57 SFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKL-VNGSSNLG-HICYARKLFDEF 114
S + S++ Q+H+Q I G+ N KL V S LG H+ YA KLF +
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKI 94
Query: 115 SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC 174
PDV +WN +I+G+S+ + + +Y M +EGV PD TFP++L L+C
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRD-GGALAC 153
Query: 175 --LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQ 232
+H V+++G G +++VQN LV MY+ CG + MAR VFD V SW +ISGY +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
E E++ L +M V + L+ ++ A V D + + +H + + E L
Sbjct: 214 MKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRL 273
Query: 293 LISLTAFYAKCGQVIVA-------------------------------RSFFDQMKTSSV 321
+L YA CG++ +A R++FDQM
Sbjct: 274 ENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR 333
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
I W MI GY + G E++++FREM + + PD T+ S A A +GSL++ +W+ Y
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
+ K++ +D+ V ALIDMY KCG E A+ VF ++D W+AM++G +GQG EA
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVD 500
I ++ M+ + P+D+T++G+L+ACNHSG+V + + F MR IEP HY C+VD
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVD 513
Query: 501 LLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
+LGRAG + +AY+ + KM + P VWGALL A ++H + E AAKK+ L+P N
Sbjct: 514 MLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAV 573
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
Y L N+YA + W + VR + + + K G+S+IE+NG F GDKSH +S+EI
Sbjct: 574 YALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEI 633
Query: 621 YNEIQRLERRLKEIGFVPHTESVLHD 646
Y +++ L + ++P T +L +
Sbjct: 634 YMKLEELAQESTFAAYLPDTSELLFE 659
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 37/363 (10%)
Query: 148 EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAK--CGNI 205
E + D F +L C F+ +H Q I G P+ Q L + G++
Sbjct: 28 ESISNDYSRFISILGVCKTTDQFKQ---LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHV 84
Query: 206 GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
A +F + + VV W ++I G+++ E +RL+ M V D ++
Sbjct: 85 SYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL 144
Query: 266 G-DVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
D L G+ LH ++K G + +L Y+ CG + +AR FD+ V W
Sbjct: 145 KRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSW 204
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
N MISGY + EE+++L EM + P SVT+ A ++V L + + +YVS+
Sbjct: 205 NLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 385 SEYASDIFVNTALIDMYAKC-------------------------------GNVESARIV 413
+ + + AL++ YA C GN++ AR
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
FD+ +D I W+ MI GY G E++ ++ M+ AG+ P++ T + +LTAC H G +
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 474 REG 476
G
Sbjct: 385 EIG 387
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/571 (35%), Positives = 331/571 (57%), Gaps = 3/571 (0%)
Query: 66 STHKRHLDQIHNQLIVSGLKHNGFLITK-LVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
S KRH+ QIH +I +G NG I++ L+ +G I YARK+FDE V ++N+
Sbjct: 27 SKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNS 86
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
+I YSR + +Y M E + PD TF +KAC L V + + +G
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG 146
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
+ DVFV + ++ +Y KCG + A V+F + R V+ WT++++G+AQ G++L+A+ +
Sbjct: 147 YKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M+N D + ++ +++A GD+ D + GRS+HG + + G + SL YAK G
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVG 266
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
+ VA F +M + + W ++ISG+A+NG A +A + EM + +PD VT+ +
Sbjct: 267 FIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIM 424
A +QVGSLK + + Y+ K + D TAL+DMY+KCG + S+R +F+ KD++
Sbjct: 327 ACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVC 385
Query: 425 WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM- 483
W+ MI YG+HG G E ++L+ M ++ + P+ TF LL+A +HSGLV +G F M
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMI 445
Query: 484 RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLG 543
+ I+P +HY C++DLL RAG +++A D I ++ + +W ALLS C HR++++G
Sbjct: 446 NKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVG 505
Query: 544 EYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGK 603
+ AA K+ L+P + G +SN +A++ W VA VR LMR + K GYS IE+NG+
Sbjct: 506 DIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGE 565
Query: 604 LQVFHVGDKSHPRSDEIYNEIQRLERRLKEI 634
L+ F + D SH + ++ L+ ++++
Sbjct: 566 LRTFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/573 (37%), Positives = 331/573 (57%), Gaps = 11/573 (1%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGL---KHNGFLITKLVNGSSNLGHICYARKLFDEFSHP 117
+L+D H HL QIH L+ S + + + FL L + YAR+L +
Sbjct: 6 TLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTL 65
Query: 118 DVFLWNAIIRGYSRSNLF--RNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
+ LW+++I +S R + Y MRR GV P TFP +LKA +L D
Sbjct: 66 SIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQ 124
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
H ++++G D FV+N L++ Y+ G A +FDG D+ VV+WT++I G+ +NG
Sbjct: 125 FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGS 184
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI- 294
A EA+ F +M+ T V + + +VS+++A G V+D+ GRS+HG ++ G + D+ I
Sbjct: 185 ASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG-RVKCDVFIG 243
Query: 295 -SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK 353
SL Y KC A+ FD+M + +V+ W A+I+GY ++ ++ + +F EM+ ++
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 354 PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
P+ T+ S A A VG+L + + Y+ K+ + T LID+Y KCG +E A +V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
F+R EK+V W+AMI G+ HG +A +L++ M + V PN+VTF+ +L+AC H GLV
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 474 REGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
EG LF M+G F +EP+ +HY+C+VDL GR G L++A I +M +EP VWGAL
Sbjct: 424 EEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFG 483
Query: 533 ACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
+C +H+ LG+YAA ++ L P ++G Y L+NLY+ S+ WD VA VR M+++ + K
Sbjct: 484 SCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKS 543
Query: 593 LGYSVIEINGKLQVFHVGDKSHP-RSDEIYNEI 624
G+S IE+ GKL F D P SD++Y +
Sbjct: 544 PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTL 576
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/622 (34%), Positives = 344/622 (55%), Gaps = 43/622 (6%)
Query: 51 HGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVN--GSSNLGHICYAR 108
H L + SL++ HL QI Q+I++GL + F ++L+ S ++ Y+
Sbjct: 48 HSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSV 107
Query: 109 KLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGV---DPDGFTFPYVLKACT 165
K+ +P++F WN IRG+S S + + +Y M R G PD FT+P + K C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 166 ELLDFRLSCLVH---GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
D RLS L H G V++ V N + M+A CG++ AR VFD R +VS
Sbjct: 168 ---DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVS 224
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
W +I+GY + GEA +A+ ++ M + VK D + ++ +V + + DL +G+ + +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVK 284
Query: 283 KMG---------------------------FED-EPDLLISLTAF---YAKCGQVIVARS 311
+ G F++ E ++S T YA+CG + V+R
Sbjct: 285 ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRK 344
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
FD M+ V++WNAMI G + ++A+ LF+EM T N KPD +T+ A +Q+G+
Sbjct: 345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGA 404
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L + W+ Y+ K + ++ + T+L+DMYAKCGN+ A VF ++ + ++A+I G
Sbjct: 405 LDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGG 464
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEP 490
LHG AI+ ++ M AG+ P+++TFIGLL+AC H G+++ G + F M+ F + P
Sbjct: 465 LALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 524
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
+ +HYS +VDLLGRAG L++A + M +E +VWGALL C++H +V LGE AAKKL
Sbjct: 525 QLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL 584
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
LDP ++G YV L +Y + +W+ R +M E+G+ K G S IE+NG + F V
Sbjct: 585 LELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVR 644
Query: 611 DKSHPRSDEIYNEIQRLERRLK 632
DKS P S++IY+ + L R ++
Sbjct: 645 DKSRPESEKIYDRLHCLGRHMR 666
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/590 (35%), Positives = 325/590 (55%), Gaps = 11/590 (1%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+ +H LI S + F+ T V+ + YA K+F+ D WNA++ G+ +S
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
++ MR + PD T ++++ + +L +H IR G V V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 193 NGLVAMYAKCGNIGMARVVFDGLN--DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
N ++ Y KCG++ A++VF+ ++ DRTVVSW S+ Y+ GEA +A L+ M +
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
K D +++ + + + L QGR +H I +G + + + + + + Y+K AR
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
FD M + + + W MISGYA+ G +EA+ LF MI KPD VT+ S + G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 371 SLKLAQWMDDYVSKSEYASD-IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
SL+ +W+D D + + ALIDMY+KCG++ AR +FD T EK V+ W+ MI
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGI 488
GY L+G EA+ L+ M PN +TF+ +L AC HSG + +GWE FH M+ + I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAK 548
P +HYSC+VDLLGR G L++A + I MS +P +WGALL+ACKIHR+V + E AA+
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFH 608
LF+L+P YV+++N+YA++ +WD A +R +M+++ + K G SVI++NGK F
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 609 VGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNI 658
VG+ H ++ IY + L K+ + VL+ Y+E+ L I
Sbjct: 612 VGEHGHVENEVIYFTLNGLSLFAKD-------KHVLYKDVYKEQSYELFI 654
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 225/477 (47%), Gaps = 25/477 (5%)
Query: 108 RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
R+L+ V WN IR N ++ ++ M+R G +P+ FTFP+V KAC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 168 LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
D +VH +I+ F DVFV V M+ KC ++ A VF+ + +R +W +++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
SG+ Q+G +A LF +MR ++ D + +++++++ L+ ++H I++G +
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTS--SVIMWNAMISGYAKNGHAEEAVDLFR 345
+ + + + Y KCG + A+ F+ + +V+ WN+M Y+ G A +A L+
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
M+ KPD T + A + +L + + + DI I MY+K
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE 305
Query: 406 NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
+ SAR++FD + + + W+ MI GY G EA+ L+HAM ++G P+ VT + L++
Sbjct: 306 DTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLIS 365
Query: 466 ACNHSGLVREG-WELFHCMRGFGIEPRNEHYSC----------VVDLLGRAGYLDQAYDF 514
C G + G W I+ R + Y C ++D+ + G + +A D
Sbjct: 366 GCGKFGSLETGKW----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARD- 414
Query: 515 IMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASS 571
I + E V W +++ ++ K+ LD Y H L+ L A +
Sbjct: 415 IFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD-YKPNHITFLAVLQACA 470
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 8/209 (3%)
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
++ R + SSV WN I E++ LFREM +P++ T A A
Sbjct: 3 LIHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC 62
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
A++ + + + ++ KS + SD+FV TA +DM+ KC +V+ A VF+R E+D W+
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
AM+ G+ G +A +L+ MR + P+ VT + L+ S + +L M
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAMHAV 178
Query: 487 GIEPRNEHYSCV----VDLLGRAGYLDQA 511
GI + V + G+ G LD A
Sbjct: 179 GIRLGVDVQVTVANTWISTYGKCGDLDSA 207
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 320/565 (56%), Gaps = 6/565 (1%)
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
++L DF + V+G++ + + + NG Y + G++ AR VFD + DR + +W
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNYMSSNILING----YVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++I+G Q E L LF +M D L S+ + + G+ +HG IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G E + + SL Y + G++ M +++ WN +I G A+NG E + L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
+ M +P+ +T + + + + Q + K +S + V ++LI MY+KC
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGL 463
G + A F ++D +MWS+MI YG HGQG EAI L++ M Q + N+V F+ L
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 464 LTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEP 522
L AC+HSGL +G ELF M +G +P +HY+CVVDLLGRAG LDQA I M I+
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 523 GVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRV 582
+ +W LLSAC IH++ + + K++ +DP ++ YV L+N++AS++ W V+ VR
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 583 LMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTES 642
MR+K + K+ G S E G++ F +GD+S +S EIY+ ++ L +K G+ P T S
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTAS 480
Query: 643 VLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVE 702
VLHD++ EEKE +L HSE++AVA+ L+ G +RI KNLR C +CH K IS +
Sbjct: 481 VLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKN 540
Query: 703 REIIVRDANRFHHFKDGLCSCGDYW 727
REI +RD +RFHHF +G CSCGDYW
Sbjct: 541 REITLRDGSRFHHFINGKCSCGDYW 565
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 177/381 (46%), Gaps = 5/381 (1%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
L+NG G + ARK+FDE + WNA+I G + + ++ M G PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
+T V L + +HG I+YG D+ V + L MY + G + +V
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 214 GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+ R +V+W ++I G AQNG L L+ M+ + + + I V+++ + D+ Q
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
G+ +H IK+G ++ SL + Y+KCG + A F + + +MW++MIS Y
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGF 270
Query: 334 NGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVG-SLKLAQWMDDYVSKSEYASDI 391
+G +EA++LF M + N++ + V + A + G K + D V K + +
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGL 330
Query: 392 FVNTALIDMYAKCGNVESAR-IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
T ++D+ + G ++ A I+ + D+++W ++ +H A ++ + Q
Sbjct: 331 KHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 451 AGVCPNDVTFIGLLTACNHSG 471
+ PND LL + S
Sbjct: 391 --IDPNDSACYVLLANVHASA 409
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 322/561 (57%), Gaps = 3/561 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
QIH ++ GL ++ ++ T L++ S G + A +F + +WNA++ Y+ ++
Sbjct: 293 QIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEND 352
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ ++++G MR++ V PD FT V+ C+ L + VH ++ + +++
Sbjct: 353 YGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD--V 251
L+ +Y+KCG A +VF + ++ +V+W S+ISG +NG+ EAL++F M++ D +
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
K D + S+ A ++ L G +HG +IK G + SL Y+KCG +A
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
F M T +++ WN+MIS Y++N E ++DLF M+++ I PDSV++ S +A + S
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L + + Y + SD + ALIDMY KCG + A +F + K +I W+ MI G
Sbjct: 593 LLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYG 652
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEP 490
YG HG A++L+ M++AG P+DVTF+ L++ACNHSG V EG +F M+ +GIEP
Sbjct: 653 YGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEP 712
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
EHY+ +VDLLGRAG L++AY FI M IE S+W LLSA + H +V LG +A+KL
Sbjct: 713 NMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKL 772
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
++P YVQL NLY + L + A + LM+EKGL K G S IE++ + VF G
Sbjct: 773 LRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSG 832
Query: 611 DKSHPRSDEIYNEIQRLERRL 631
S P EI+N + RL+ +
Sbjct: 833 GSSSPMKAEIFNVLNRLKSNM 853
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 232/476 (48%), Gaps = 9/476 (1%)
Query: 52 GLNLDSFYASLI------DNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHIC 105
G+ D+F S++ + + + QIH ++ + L + FL T L++ G
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 106 YARKLFDEFS-HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
A ++F E +V LWN +I G+ S + +++++Y L + V +F L AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
++ + +H V++ G D +V L++MY+KCG +G A VF + D+ + W
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++++ YA+N AL LF MR V D L +++ + G+S+H + K
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
+ + +L Y+KCG A F M+ ++ W ++ISG KNG +EA+ +F
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 345 REMITRN--IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYA 402
+M + +KPDS + S A A + +L+ + + K+ ++FV ++LID+Y+
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYS 522
Query: 403 KCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
KCG E A VF S ++++ W++MI Y + +I+L++ M G+ P+ V+
Sbjct: 523 KCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 463 LLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
+L A + + + +G L GI + ++D+ + G+ A + KM
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/478 (27%), Positives = 231/478 (48%), Gaps = 13/478 (2%)
Query: 67 THKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHP-------DV 119
T+ + IH ++V G +++ F+ T LVN G + YA ++FD +S DV
Sbjct: 74 TNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDV 133
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS--CLVH 177
+WN++I GY + F+ + + M GV PD F+ V+ + +FR +H
Sbjct: 134 TVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIH 193
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCG-NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
G ++R D F++ L+ MY K G +I RV + + VV W +I G+ +G
Sbjct: 194 GFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC 253
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
+L L+ +N VKL + + A ++ GR +H ++KMG ++P + SL
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
+ Y+KCG V A + F + + +WNAM++ YA+N + A+DLF M +++ PDS
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ + + +G + + + K S + +AL+ +Y+KCG A +VF
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR--QAGVCPNDVTFIGLLTACNHSGLVR 474
EKD++ W ++I G +G+ EA+ ++ M+ + P+ + AC +R
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 475 EGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
G ++ M G+ S ++DL + G + A MS E V+ W +++S
Sbjct: 494 FGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA-WNSMIS 550
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 204/427 (47%), Gaps = 17/427 (3%)
Query: 123 NAIIRGYSRSNLFRNTIEMYGLMRREGVDP---DGFTFPYVLKACTELLDFRLSCLVHGQ 179
N+ IR + + + +Y + +G P FTFP +LKAC+ L + +HG
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD-------GLNDRTVVSWTSIISGYAQ 232
V+ G+ D F+ LV MY KCG + A VFD G++ R V W S+I GY +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDL--EQGRSLHGCIIKMGFEDEP 290
E + F +M V+ D +L +V + E+G+ +HG +++ + +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 291 DLLISLTAFYAKCGQVIVA-RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
L +L Y K G I A R F + S+V++WN MI G+ +G E ++DL+
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
++K S + A A +Q + + + V K +D +V T+L+ MY+KCG V
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNH 469
A VF +K + +W+AM+ Y + G+ A++L+ MRQ V P+ T +++ C+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 470 SGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGA 529
GL G + + I+ + S ++ L + G AY + K E + WG+
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY-LVFKSMEEKDMVAWGS 444
Query: 530 LLSA-CK 535
L+S CK
Sbjct: 445 LISGLCK 451
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 315/552 (57%), Gaps = 13/552 (2%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLG---HICYARKLFDEFSHP 117
S ++N L+Q+H +I S + N +++L++ + ++ YAR +F+ P
Sbjct: 11 SQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCP 70
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
V++WN++IRGYS S + Y M R+G PD FTFPYVLKAC+ L D + VH
Sbjct: 71 SVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL 237
G V++ GF +++V L+ MY CG + VF+ + VV+W S+ISG+ N
Sbjct: 131 GFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFS 190
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED--------E 289
+A+ F +M++ VK + +V ++ A G D+ G+ HG + +GF+
Sbjct: 191 DAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFN 250
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
L SL YAKCG + AR FD M +++ WN++I+GY++NG AEEA+ +F +M+
Sbjct: 251 VILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLD 310
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
I PD VT S AS G +L Q + YVSK+ + D + AL++MYAK G+ ES
Sbjct: 311 LGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAES 370
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACN 468
A+ F+ +KD I W+ +I+G HG G EA++++ M++ G P+ +T++G+L AC+
Sbjct: 371 AKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACS 430
Query: 469 HSGLVREGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVW 527
H GLV EG F MR G+EP EHY C+VD+L RAG ++A + M ++P V++W
Sbjct: 431 HIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIW 490
Query: 528 GALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREK 587
GALL+ C IH ++ L + + + +G YV LSN+YA + W V +R M+ K
Sbjct: 491 GALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSK 550
Query: 588 GLSKDLGYSVIE 599
+ K LG+S +E
Sbjct: 551 RVDKVLGHSSVE 562
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/587 (37%), Positives = 325/587 (55%), Gaps = 16/587 (2%)
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL 215
T +++ +E + + L+H ++ GF D F N LV Y K I AR +FD +
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 216 NDRTVVSWTSIISGYAQNGEALEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQG 274
+ VVSWTS+ISGY G+ AL +F +M + V + S+ +A + + G
Sbjct: 91 CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIG 150
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM--KTSSVIMWNAMISGYA 332
+++H + G + SL Y KC V AR FD M +V+ W +MI+ YA
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 333 KNGHAEEAVDLFREM---ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+N EA++LFR +T + + + + S A + +G L+ + V++ Y S
Sbjct: 211 QNARGHEAIELFRSFNAALTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
+ V T+L+DMYAKCG++ A +F R VI +++MIM HG G A+ L+ M
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 450 QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYL 508
+ PN VT +G+L AC+HSGLV EG E M +G+ P + HY+CVVD+LGR G +
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRV 389
Query: 509 DQAYDFIMKMSI--EPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSN 566
D+AY+ + + E G +WGALLSA ++H V + A+K+L + T Y+ LSN
Sbjct: 390 DEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSN 449
Query: 567 LYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
YA S W+ +R+ M+ G K+ S IE + VFH GD S S EI ++
Sbjct: 450 AYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKD 509
Query: 627 LERRLKEIG------FVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRI 680
LE+R+KE G + + SV D++ E K+E +++H ER+A+AYGL+ G+ +RI
Sbjct: 510 LEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRI 569
Query: 681 TKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
NLR C +CH KLIS++VEREI+VRD NRFH FK+G C+C DYW
Sbjct: 570 MNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 195/395 (49%), Gaps = 11/395 (2%)
Query: 53 LNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD 112
L +F + ST+ + +H + G + F + LV L I ARKLFD
Sbjct: 29 LKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFD 88
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE-GVDPDGFTFPYVLKACTELLDFR 171
E P+V W ++I GY+ +N + M+ M + V P+ +TF V KAC+ L + R
Sbjct: 89 EMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESR 148
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL--NDRTVVSWTSIISG 229
+ +H ++ G ++ V + LV MY KC ++ AR VFD + R VVSWTS+I+
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 230 YAQNG---EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
YAQN EA+E R FN +D + + L S++ A + L+ G+ HG + + G+
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSD-RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY 267
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
E + SL YAKCG + A F +++ SVI + +MI AK+G E AV LF E
Sbjct: 268 ESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDE 327
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
M+ I P+ VT+ A + G + +++ K D T ++DM + G
Sbjct: 328 MVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFG 387
Query: 406 NVESA---RIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
V+ A + +E+ ++W A++ LHG+
Sbjct: 388 RVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR 422
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 136/302 (45%), Gaps = 11/302 (3%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF--SHPDVFLWNAIIRGYSR 131
IH +L +SGL+ N + + LV+ + AR++FD +V W ++I Y++
Sbjct: 152 NIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 132 SNLFRNTIEMYGLMRREGVD--PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+ IE++ + F V+ AC+ L + + HG V R G+ +
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
V L+ MYAKCG++ A +F + +V+S+TS+I A++G A++LF++M
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII-KMGFEDEPDLLISLTAFYAKCGQVIV 308
+ +++ L+ ++ A + +G + K G + + + G+V
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
Query: 309 ARSFFDQMKTSS---VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
A ++ + ++W A++S +G E + + +I N VT AL+
Sbjct: 392 AYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN---QQVTSAYIALS 448
Query: 366 SA 367
+A
Sbjct: 449 NA 450
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/552 (36%), Positives = 324/552 (58%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+HG V++ G V N L+ Y+K +R F+ ++ +W+SIIS +AQN
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
+L +M +++ D L S ++ + + GRS+H +K G++ + + S
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
L YAKCG+++ AR FD+M +V+ W+ M+ GYA+ G EEA+ LF+E + N+ +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
+ S A L+L + + KS + S FV ++L+ +Y+KCG E A VF+
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
K++ +W+AM+ Y H + I L+ M+ +G+ PN +TF+ +L AC+H+GLV E
Sbjct: 277 EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDE 336
Query: 476 GWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACK 535
G F M+ IEP ++HY+ +VD+LGRAG L +A + I M I+P SVWGALL++C
Sbjct: 337 GRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCT 396
Query: 536 IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGY 595
+H++ L +AA K+F L P ++G ++ LSN YA+ ++ A R L+R++G K+ G
Sbjct: 397 VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGL 456
Query: 596 SVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEEN 655
S +E K+ F G++ H +S EIY ++ L +++ G++ T VL +++ +EK +
Sbjct: 457 SWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQT 516
Query: 656 LNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHH 715
+ HSER+A+A+GLI+ +R+ KNLR C +CH+ IK +S R IIVRD NRFH
Sbjct: 517 IRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHR 576
Query: 716 FKDGLCSCGDYW 727
F+DG CSC DYW
Sbjct: 577 FEDGKCSCNDYW 588
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 1/363 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++ SGL + L+N S +R+ F++ W++II ++++
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNE 95
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L ++E M + PD P K+C L + VH ++ G+ DVFV +
Sbjct: 96 LPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGS 155
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MYAKCG I AR +FD + R VV+W+ ++ GYAQ GE EAL LF + ++ +
Sbjct: 156 SLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAV 215
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ + S++ + LE GR +HG IK F+ + SL + Y+KCG A F
Sbjct: 216 NDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVF 275
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+++ ++ +WNAM+ YA++ H ++ ++LF+ M +KP+ +T + A + G +
Sbjct: 276 NEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVD 335
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGY 432
++ D + +S +L+DM + G ++ A ++ + + +W A++
Sbjct: 336 EGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSC 395
Query: 433 GLH 435
+H
Sbjct: 396 TVH 398
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 136/268 (50%), Gaps = 1/268 (0%)
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
+G LHG ++K G P + +L FY+K +R F+ S W+++IS +A
Sbjct: 33 KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFA 92
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
+N +++ ++M+ N++PD + SA + A + + + + K+ Y +D+F
Sbjct: 93 QNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVF 152
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
V ++L+DMYAKCG + AR +FD +++V+ WS M+ GY G+ EA+ L+
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
+ ND +F +++ C +S L+ G ++ + + S +V L + G + AY
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 513 DFIMKMSIEPGVSVWGALLSACKIHRHV 540
++ ++ + +W A+L A H H
Sbjct: 273 QVFNEVPVK-NLGIWNAMLKAYAQHSHT 299
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/546 (37%), Positives = 311/546 (56%), Gaps = 6/546 (1%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS--HPD 118
+++ + H Q+H ++I+ G + L + L N + +A F+ +
Sbjct: 12 TILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRN 71
Query: 119 VFLWNAIIRGYSRSN--LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
WN I+ GYS+S + + + +Y MRR D F + +KAC L L+
Sbjct: 72 RHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILI 131
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
HG ++ G D +V LV MYA+ G + A+ VFD + R V W ++ GY + +
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKD 191
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL-IS 295
E RLF MR+T + LD + L+ +V+A G+V + G+ +HG I+ F D+ D L S
Sbjct: 192 PEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQAS 251
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
+ Y KC + AR F+ +V+MW +ISG+AK A EA DLFR+M+ +I P+
Sbjct: 252 IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPN 311
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
T+ + ++ + +GSL+ + + Y+ ++ D T+ IDMYA+CGN++ AR VFD
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
E++VI WS+MI +G++G EA++ +H M+ V PN VTF+ LL+AC+HSG V+E
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 476 GWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
GW+ F M R +G+ P EHY+C+VDLLGRAG + +A FI M ++P S WGALLSAC
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 535 KIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLG 594
+IH+ V L A+KL S++P + YV LSN+YA + +W+ V VR M KG K +G
Sbjct: 492 RIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551
Query: 595 YSVIEI 600
S E+
Sbjct: 552 QSATEV 557
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 319/577 (55%), Gaps = 15/577 (2%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFG--PDVFVQNGLVAMYAKCGNIGMARVVFDGLN- 216
+L+ C + R +H VI G P +F + G++ A+++FD +
Sbjct: 11 MLQGCNSMKKLRK---IHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV-KLDWIALVSIVRAYGDVDDLEQGR 275
D + W +I G++ + L ++ +N+M + V + D +++ + + +
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 276 SLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNG 335
+HG +I+ GF D+ + SL Y+ G V +A FD+M ++ WN MI ++ G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
+A+ +++ M + DS T+ + + A V +L + + S +FV+
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
ALIDMYAKCG++E+A VF+ ++DV+ W++MI+GYG+HG G EAI+ + M +GV P
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRP 307
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
N +TF+GLL C+H GLV+EG E F M F + P +HY C+VDL GRAG L+ + +
Sbjct: 308 NAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 515 IMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLW 574
I S +W LL +CKIHR++ LGE A KKL L+ +N G YV ++++Y+++
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDA 427
Query: 575 DHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEI 634
A +R L+R L G+S IEI ++ F V DK HP S IY+E+ + R
Sbjct: 428 QAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILA 487
Query: 635 GFVPH----TESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNC 690
G+ P T L D + + HSE++A+AYGL+ T GT LRITKNLR C +C
Sbjct: 488 GYKPEDSNRTAPTLSDRCLGSADTS---HSEKLAIAYGLMRTTAGTTLRITKNLRVCRDC 544
Query: 691 HSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
HS K +SK REIIVRD RFHHF DG+CSC DYW
Sbjct: 545 HSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 188/372 (50%), Gaps = 6/372 (1%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVN--GSSNLGHICYARKLFDEF-SHPDVFLWNAII 126
+ L +IH+ +I++GL+H+ + L+ S G + +A+ LFD F S P WN +I
Sbjct: 19 KKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLI 78
Query: 127 RGYSRSNLFRNTIEMYGLMRREGVD-PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGF 185
RG+S S+ N+I Y M V PD FTF + LK+C + +HG VIR GF
Sbjct: 79 RGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGF 138
Query: 186 GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQ 245
D V LV Y+ G++ +A VFD + R +VSW +I ++ G +AL ++ +
Sbjct: 139 LDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKR 198
Query: 246 MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
M N V D LV+++ + V L G LH + E + +L YAKCG
Sbjct: 199 MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ A F+ M+ V+ WN+MI GY +GH EA+ FR+M+ ++P+++T L
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 366 SAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE-SARIVFDRTSEKDVI 423
+ G +K + + S+ ++ ++D+Y + G +E S +++ + +D +
Sbjct: 319 CSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV 378
Query: 424 MWSAMIMGYGLH 435
+W ++ +H
Sbjct: 379 LWRTLLGSCKIH 390
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 330/628 (52%), Gaps = 38/628 (6%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS-HPDVFLWNAIIRGYSR 131
+QIH I +G + ++ L+ + I A LF+ + W +++ GYS+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ IE + +RREG + +TFP VL AC + R+ VH +++ GF +++V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
Q+ L+ MYAKC + AR + +G+ VVSW S+I G + G EAL +F +M D+
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 252 KLDWIALVSIVRAYG-DVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
K+D + SI+ + +++ S H I+K G+ + +L YAK G + A
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
F+ M VI W A+++G NG +EA+ LF M I PD + S ASA++
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
L+ Q + KS + S + VN +L+ MY KCG++E A ++F+ +D+I W+ +I+
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIV 504
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIE 489
GY +GL+ + F MR +GI
Sbjct: 505 GYA-----------------------------------KNGLLEDAQRYFDSMRTVYGIT 529
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
P EHY+C++DL GR+G + + +M +EP +VW A+L+A + H ++ GE AAK
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHV 609
L L+P N YVQLSN+Y+++ D A+VR LM+ + +SK+ G S +E GK+ F
Sbjct: 590 LMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMS 649
Query: 610 GDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGL 669
D+ HPR EIY+++ + +KE G+ LHDL+ E KE L HSE++AVA+GL
Sbjct: 650 EDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGL 709
Query: 670 ISTAPGTILRITKNLRACVNCHSVIKLI 697
+ G +RI KNLR C +CHS +KL+
Sbjct: 710 LVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 188 DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR 247
D F N ++ Y+ + A +F + +SW ++ISGY ++G +EA LF +M+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
+ +K + L S++R + L +G +HG IK GF+ + +++ L A YA+C ++
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 308 VARSFFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
A F+ M+ + + W +M++GY++NG A +A++ FR++ + + T S A
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
A V + ++ + + KS + ++I+V +ALIDMYAKC +ESAR + + DV+ W+
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RG 485
+MI+G G EA++++ M + + +D T +L S + HC+
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVK 357
Query: 486 FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
G + +VD+ + G +D A M IE V W AL++
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTG 404
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/524 (37%), Positives = 296/524 (56%), Gaps = 7/524 (1%)
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR-NTDVKLDWIALVSIVRAYGDVD 269
VF + T+ ++I ++ + E RLF +R N+ + + ++ ++
Sbjct: 68 VFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
DL G +HG I GF + L+ +L Y+ C A FD++ + WN + S
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 330 GYAKNGHAEEAVDLFREM---ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
Y +N + + LF +M + +KPD VT A A A +G+L + + D++ ++
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYH 446
+ + ++ L+ MY++CG+++ A VF E++V+ W+A+I G ++G G EAI ++
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG--FGIEPRNEHYSCVVDLLGR 504
M + G+ P + T GLL+AC+HSGLV EG F MR F I+P HY CVVDLLGR
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
A LD+AY I M ++P ++W LL AC++H V LGE L L G YV L
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
N Y++ W+ V +R LM+EK + G S IE+ G + F V D SHPR +EIY +
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 625 QRLERRLKEIGFVPHTESVLHDL-NYEEKEENLNIHSERIAVAYGLISTAPGTILRITKN 683
+ ++LK G+V S LH+L + EEK L HSE++A+A+G++ T PGT +R+TKN
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKN 547
Query: 684 LRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
LR CV+CH+ K +S + +R +IVRD +RFHHFK G CSC D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 181/391 (46%), Gaps = 10/391 (2%)
Query: 56 DSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNG---SSNLGHICYARKLFD 112
D SLI +ST K HL QIH L+ + L N + ++ S I Y+ ++F
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFS 70
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDP-DGFTFPYVLKACTELLDFR 171
+ +P + N +IR +S S ++ +RR P + + + LK C + D
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYA 231
+HG++ GF D + L+ +Y+ C N A VFD + R VSW + S Y
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 232 QNGEALEALRLFNQMRNT---DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
+N + L LF++M+N VK D + + ++A ++ L+ G+ +H I + G
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+L +L + Y++CG + A F M+ +V+ W A+ISG A NG +EA++ F EM+
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY--ASDIFVNTALIDMYAKCGN 406
I P+ T+ A + G + D + E+ ++ ++D+ +
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARL 370
Query: 407 VESA-RIVFDRTSEKDVIMWSAMIMGYGLHG 436
++ A ++ + D +W ++ +HG
Sbjct: 371 LDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 298/531 (56%), Gaps = 5/531 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H +++ S + ++ L+ N G + AR +FD + DV WN +I GY R+
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ + M+ M E VD D T +L C L D + VH V G + V+N
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
LV MY KCG + AR VFD + R V++WT +I+GY ++G+ AL L M+ V+ +
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+ + S+V GD + G+ LHG ++ + + SL + YAKC +V + F
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
W+A+I+G +N +A+ LF+ M +++P+ T+ S A A + L+
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE----KDVIMWSAMIM 430
A + Y++K+ + S + T L+ +Y+KCG +ESA +F+ E KDV++W A+I
Sbjct: 439 AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIE 489
GYG+HG G A+ ++ M ++GV PN++TF L AC+HSGLV EG LF M +
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
R+ HY+C+VDLLGRAG LD+AY+ I + EP +VWGALL+AC H +V LGE AA K
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANK 618
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
LF L+P NTG+YV L+N+YA+ W + VR +M GL K G+S IEI
Sbjct: 619 LFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 257/465 (55%), Gaps = 9/465 (1%)
Query: 80 IVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTI 139
+++G + +G +++ L + GHI YARKLF+E + +N +IR Y R L+ + I
Sbjct: 41 VITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAI 100
Query: 140 EMYGLMRREGVD--PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVA 197
++ M EGV PDG+T+P+V KA EL +L +VHG+++R FG D +VQN L+A
Sbjct: 101 SVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLA 160
Query: 198 MYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIA 257
MY G + MAR VFD + +R V+SW ++ISGY +NG +AL +F+ M N V LD
Sbjct: 161 MYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHAT 220
Query: 258 LVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK 317
+VS++ G + DLE GR++H + + D+ ++ +L Y KCG++ AR FD+M+
Sbjct: 221 IVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME 280
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL--A 375
VI W MI+GY ++G E A++L R M ++P++VT+ A+L S +LK+
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI--ASLVSVCGDALKVNDG 338
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLH 435
+ + + + + SDI + T+LI MYAKC V+ VF S+ WSA+I G +
Sbjct: 339 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 398
Query: 436 GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY 495
+A+ L+ MR+ V PN T LL A +R+ + + G +
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 496 SCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSACKIH 537
+ +V + + G L+ A ++ I + V +WGAL+S +H
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 284/485 (58%), Gaps = 38/485 (7%)
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKC---------------------------------G 304
H I K+G+ P LL+S A Y +C G
Sbjct: 53 HAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIG 112
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT-RNIKPDSVTVRSAA 363
+ +A+ +VI WN MI GY +N EEA+ + M++ +IKP+ + S+
Sbjct: 113 ESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSL 172
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
A A++G L A+W+ + S + +++AL+D+YAKCG++ ++R VF DV
Sbjct: 173 AACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVS 232
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM 483
+W+AMI G+ HG EAI ++ M V P+ +TF+GLLT C+H GL+ EG E F M
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 484 -RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTL 542
R F I+P+ EHY +VDLLGRAG + +AY+ I M IEP V +W +LLS+ + +++ L
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPEL 352
Query: 543 GEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING 602
GE A + +L +G YV LSN+Y+S++ W+ VR LM ++G+ K G S +E G
Sbjct: 353 GEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGG 409
Query: 603 KLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSER 662
+ F GD SH + IY ++ L ++ K GFV T+ VL D++ EEKEENLN HSE+
Sbjct: 410 MIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEK 469
Query: 663 IAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCS 722
+A+AY ++ ++PGT +RI KN+R C +CH+ IK +SKL+ R II+RD RFH F+DGLCS
Sbjct: 470 LALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCS 529
Query: 723 CGDYW 727
C DYW
Sbjct: 530 CRDYW 534
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 3/248 (1%)
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR-LF 243
P V N ++ K G G+A+ V +D+ V++W +I GY +N + EAL+ L
Sbjct: 94 LSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALK 153
Query: 244 NQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC 303
N + TD+K + + S + A + DL + +H +I G E L +L YAKC
Sbjct: 154 NMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC 213
Query: 304 GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
G + +R F +K + V +WNAMI+G+A +G A EA+ +F EM ++ PDS+T
Sbjct: 214 GDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 364 LASAQVGSLKLAQWMDDYVSKS-EYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKD 421
+ G L+ + +S+ + A++D+ + G V+ A ++ E D
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPD 333
Query: 422 VIMWSAMI 429
V++W +++
Sbjct: 334 VVIWRSLL 341
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 149/333 (44%), Gaps = 38/333 (11%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIE-MYGLMRREG 149
I ++ +G A+K+ S +V WN +I GY R+ + ++ + ++
Sbjct: 101 INLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
+ P+ F+F L AC L D + VH +I G + + + LV +YAKCG+IG +R
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
VF + V W ++I+G+A +G A EA+R+F++M V D I + ++
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
LE+G+ G +++R F Q K + AM+
Sbjct: 281 LLEEGKEYFG---------------------------LMSRRFSIQPKLEH---YGAMVD 310
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+ G +EA +L M I+PD V RS +S + +L + +SK++
Sbjct: 311 LLGRAGRVKEAYELIESM---PIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGD 367
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
+ ++ ++Y+ ESA+ V + S++ +
Sbjct: 368 YVLLS----NIYSSTKKWESAQKVRELMSKEGI 396
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 2/160 (1%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H +H+ +I SG++ N L + LV+ + G I +R++F DV +WNA+I G++
Sbjct: 183 HAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFA 242
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI-RYGFGPDV 189
L I ++ M E V PD TF +L C+ G + R+ P +
Sbjct: 243 THGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKL 302
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLN-DRTVVSWTSIIS 228
+V + + G + A + + + + VV W S++S
Sbjct: 303 EHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/558 (36%), Positives = 317/558 (56%), Gaps = 9/558 (1%)
Query: 49 LDHGLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
+ HG D ++ + T + LD +IH QL V + ++T L++ + G I
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL-VKVPSFDNVVLTGLLDMYAKCGEI 192
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
A K+F++ + +V W ++I GY +++L + ++ MR V + +T+ ++ AC
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
T+L HG +++ G + L+ MY KCG+I AR VF+ + +V WT
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++I GY NG EAL LF +M+ ++K + + + S++ G +++LE GRS+HG IK+
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV 372
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G D ++ +L YAKC Q A+ F+ ++ WN++ISG+++NG EA+ LF
Sbjct: 373 GIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY--ASDIFVNTALIDMYA 402
M + ++ P+ VTV S A A +GSL + + Y K + +S + V TAL+D YA
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 403 KCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
KCG+ +SAR++FD EK+ I WSAMI GYG G ++ L+ M + PN+ TF
Sbjct: 492 KCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 463 LLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
+L+AC H+G+V EG + F M + + P +HY+C+VD+L RAG L+QA D I KM I+
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 522 PGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVR 581
P V +GA L C +H LGE KK+ L P + +YV +SNLYAS W+ VR
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVR 671
Query: 582 VLMREKGLSKDLGYSVIE 599
LM+++GLSK G+S +E
Sbjct: 672 NLMKQRGLSKIAGHSTME 689
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/472 (33%), Positives = 235/472 (49%), Gaps = 5/472 (1%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
L+ T+ L Q H L +GL + + TKLV+ G+ AR +FD+ PD +L
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
W ++R Y + +++Y L+ + G D F LKACTEL D +H Q++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
+ D V GL+ MYAKCG I A VF+ + R VV WTS+I+GY +N E L
Sbjct: 170 KVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
LFN+MR +V + +++ A + L QG+ HGC++K G E L+ SL Y
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
KCG + AR F++ ++MW AMI GY NG EA+ LF++M IKP+ VT+ S
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIAS 348
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+ +L+L + + +S D V AL+ MYAKC A+ VF+ SEKD
Sbjct: 349 VLSGCGLIENLELGRSVHG-LSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKD 407
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL-- 479
++ W+++I G+ +G EA+ L+H M V PN VT L +AC G + G L
Sbjct: 408 IVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHA 467
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
+ GF + ++D + G Q+ I E W A++
Sbjct: 468 YSVKLGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMI 518
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 329/586 (56%), Gaps = 24/586 (4%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
++ T LV G + K+F + + W+ ++ GY+ I+++ L RE
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 149 ---GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNI 205
G D D + F VL + + L +H I+ G V + N LV MY+KC ++
Sbjct: 214 KEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 206 GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
A +FD DR ++W+++++GY+QNGE+LEA++LF++M + +K +V ++ A
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWN 325
D+ LE+G+ LH ++K+GFE +L YAK G + AR FD ++ V +W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
++ISGY +N EEA+ L+R M T I P+ T+ S A + + +L+L + + + K
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 386 EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
+ ++ + +AL MY+KCG++E +VF RT KDV+ W+AMI G +GQG EA+ L+
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 446 HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGR 504
M G+ P+DVTF+ +++AC+H G V GW F+ M G++P+ +HY+C+VDLL R
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSR 572
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
AG L +A +FI +I+ G+ +W LLSACK H LG YA +KL +L + YVQL
Sbjct: 573 AGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQL 632
Query: 565 SNLYAS-------SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRS 617
S +Y + R+W H MR G+SK++G S IE+ + VF VGD HP
Sbjct: 633 SGIYTALGRMRDVERVWKH-------MRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMI 685
Query: 618 DEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERI 663
+E + + + R++ E GFV +VL D ++ E+EE + + I
Sbjct: 686 EETKDLVCLVSRQMIEEGFV----TVL-DSSFVEEEEGTQLSTSFI 726
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 245/496 (49%), Gaps = 24/496 (4%)
Query: 55 LDSFYASLIDNSTH---KRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYAR 108
L+ ++L+ TH +R+L +H Q+I +G LVN + G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 109 KLFDEFSHPDVFLWNAIIRGYSRSNLFRNT---IEMYGLMRREGVDPDGFTFPYVLKACT 165
+F+ DV WN++I GYS++ ++ ++++ MR + + P+ +T + KA +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
L + H V++ D++V LV MY K G + VF + +R +W++
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 226 IISGYAQNGEALEALRLFN-----QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
++SGYA G EA+++FN + +D + A++S + A V GR +H
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCI 246
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
IK G L +L Y+KC + A FD + I W+AM++GY++NG + EA
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 341 VDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
V LF M + IKP T+ A + + L+ + + ++ K + +F TAL+DM
Sbjct: 307 VKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDM 366
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
YAK G + AR FD E+DV +W+++I GY + EA+ LY M+ AG+ PND T
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 461 IGLLTACNHSGLVREGWELF-HCMR-GFGIE-PRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
+L AC+ + G ++ H ++ GFG+E P S + + + G L+ + + +
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG---SALSTMYSKCGSLEDG-NLVFR 482
Query: 518 MSIEPGVSVWGALLSA 533
+ V W A++S
Sbjct: 483 RTPNKDVVSWNAMISG 498
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 184/367 (50%), Gaps = 4/367 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
QIH I +GL L LV S + A K+FD + W+A++ GYS++
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
++++ M G+ P +T VL AC+++ +H +++ GF +F
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MYAK G + AR FD L +R V WTS+ISGY QN + EAL L+ +M+ +
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIP 421
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ + S+++A + LE G+ +HG IK GF E + +L+ Y+KCG + F
Sbjct: 422 NDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVF 481
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+ V+ WNAMISG + NG +EA++LF EM+ ++PD VT + A + G ++
Sbjct: 482 RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Query: 374 LAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESARIVFDRTS-EKDVIMWSAMIM 430
W + + D V+ ++D+ ++ G ++ A+ + + + + +W ++
Sbjct: 542 RG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Query: 431 GYGLHGQ 437
HG+
Sbjct: 601 ACKNHGK 607
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 307/557 (55%), Gaps = 3/557 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
QIH ++ GL+ + L+ L++ G + A KLF+ + ++ W ++ GY ++
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L + +E++ M + G+ PD + +L +C L VH I+ G D +V N
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG---EALEALRLFNQMRNTD 250
L+ MYAKC + AR VFD VV + ++I GY++ G E EAL +F MR
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
++ + VS++RA + L + +HG + K G + +L Y+ C + +R
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSR 509
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
FD+MK +++WN+M +GY + EEA++LF E+ +PD T + A+ +
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
S++L Q + K + ++ AL+DMYAKCG+ E A FD + +DV+ W+++I
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEP 490
Y HG+G +A+ + M G+ PN +TF+G+L+AC+H+GLV +G + F M FGIEP
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP 689
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL 550
EHY C+V LLGRAG L++A + I KM +P VW +LLS C +V L E+AA+
Sbjct: 690 ETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMA 749
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
DP ++G + LSN+YAS +W VR M+ +G+ K+ G S I IN ++ +F
Sbjct: 750 ILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSK 809
Query: 611 DKSHPRSDEIYNEIQRL 627
DKSH ++++IY + L
Sbjct: 810 DKSHCKANQIYEVLDDL 826
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 261/537 (48%), Gaps = 48/537 (8%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+ + L+ SG + ++ T L++ G+I YAR +FD W +I G +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+++++ + + V PDG+ VL AC+ L +H ++RYG D + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ Y KCG + A +F+G+ ++ ++SWT+++SGY QN EA+ LF M +K
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D A SI+ + + L G +H IK ++ + SL YAKC + AR F
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 314 DQMKTSSVIMWNAMISGYAKNG---HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
D + V+++NAMI GY++ G EA+++FR+M R I+P +T S ASA +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
SL L++ + + K DIF +ALID+Y+ C ++ +R+VFD KD+++W++M
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC-MRGFGIE 489
GY + EA+NL+ ++ + P++ TF ++TA + V+ G E FHC + G+E
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLE 587
Query: 490 PRNEHYSCVVDLLGRAGYLDQAY----------------------------------DFI 515
+ ++D+ + G + A+ + +
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 516 MKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL-----FSLDPYNTGHYVQLSNL 567
M IEP + +LSAC H L E K+ F ++P T HYV + +L
Sbjct: 648 MSEGIEPNYITFVGVLSACS---HAGLVEDGLKQFELMLRFGIEP-ETEHYVCMVSL 700
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 218/399 (54%), Gaps = 8/399 (2%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H Q+IV GL+ + +L L+N S G + YARK+F++ ++ W+ ++ + +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 135 FRNTIEMYGLMRREGVD-PDGFTFPYVLKACTELLDFRLSCLV---HGQVIRYGFGPDVF 190
+ ++ ++ R D P+ + ++AC+ L D R +V +++ GF DV+
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL-DGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
V L+ Y K GNI AR+VFD L +++ V+WT++ISG + G + +L+LF Q+ +
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
V D L +++ A + LE G+ +H I++ G E + L+ L Y KCG+VI A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
F+ M ++I W ++SGY +N +EA++LF M +KPD S + A +
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
+L + Y K+ +D +V +LIDMYAKC + AR VFD + DV++++AMI
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 431 GYGLHGQGW---EAINLYHAMRQAGVCPNDVTFIGLLTA 466
GY G W EA+N++ MR + P+ +TF+ LL A
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 175/339 (51%), Gaps = 19/339 (5%)
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
F +TI + G RRE F L+A +LL ++ +VHGQ+I +G D ++ N
Sbjct: 35 FPSTIGIRG--RRE------FARLLQLRASDDLLHYQ--NVVHGQIIVWGLELDTYLSNI 84
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT--DVK 252
L+ +Y++ G + AR VF+ + +R +VSW++++S +G E+L +F + T D
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 253 LDWIALVSIVRAYGDVDDLEQGR----SLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
++I L S ++A +D +GR L ++K GF+ + + L FY K G +
Sbjct: 145 NEYI-LSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDY 201
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
AR FD + S + W MISG K G + ++ LF +++ N+ PD + + A +
Sbjct: 202 ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSI 261
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ L+ + + ++ + D + LID Y KCG V +A +F+ K++I W+ +
Sbjct: 262 LPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTL 321
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
+ GY + EA+ L+ +M + G+ P+ +LT+C
Sbjct: 322 LSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 12/295 (4%)
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
D L +HG II G E + L L Y++ G ++ AR F++M +++ W+ M+
Sbjct: 58 DLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV 117
Query: 329 SGYAKNGHAEEAVDLFREMI-TRNIKPDSVTVRSAALASAQVGSLKLAQWM----DDYVS 383
S +G EE++ +F E TR P+ + S A + G +WM ++
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLV 175
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN 443
KS + D++V T LID Y K GN++ AR+VFD EK + W+ MI G G+ + ++
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLG 503
L++ + + V P+ +L+AC+ + G ++ + +G+E + ++D
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACK---IHRHVTLGEYAAKKLFSLDP 555
+ G + A+ M + +S W LLS K +H+ + + + F L P
Sbjct: 296 KCGRVIAAHKLFNGMPNKNIIS-WTTLLSGYKQNALHKE-AMELFTSMSKFGLKP 348
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 314/547 (57%), Gaps = 50/547 (9%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSS--NLGHICYARKLFDEFSHPDV 119
L N + R L QIH ++V+GL N ++ +L+ +S G + YA KLFDE PDV
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQ 179
+ N ++RG ++S T+ +Y M + GV PD +TF +VLKAC++L HG+
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
V+R+GF + +V+N L+ +A CG++G+A +FD V+W+S+ SGYA+ G+ EA
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
+RLF++M D ++ W +++ GC+
Sbjct: 198 MRLFDEMPYKD-QVAWNVMIT------------------GCL------------------ 220
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
KC ++ AR FD+ V+ WNAMISGY G+ +EA+ +F+EM PD VT+
Sbjct: 221 --KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI 278
Query: 360 RSAALASAQVGSLKLAQWMDDYV-SKSEYASDIFVNT----ALIDMYAKCGNVESARIVF 414
S A A +G L+ + + Y+ + +S I+V T ALIDMYAKCG+++ A VF
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 415 DRTSEKDVIMWSAMIMGYGLH-GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
++D+ W+ +I+G LH +G +I ++ M++ V PN+VTFIG++ AC+HSG V
Sbjct: 339 RGVKDRDLSTWNTLIVGLALHHAEG--SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRV 396
Query: 474 REGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
EG + F MR + IEP +HY C+VD+LGRAG L++A+ F+ M IEP VW LL
Sbjct: 397 DEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLG 456
Query: 533 ACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
ACKI+ +V LG+YA +KL S+ +G YV LSN+YAS+ WD V VR + + + K
Sbjct: 457 ACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKP 516
Query: 593 LGYSVIE 599
G S+IE
Sbjct: 517 TGVSLIE 523
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 27/343 (7%)
Query: 304 GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
G + A FD++ V + N ++ G A++ E+ V L+ EM R + PD T
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
A +++ V + + + +V ALI +A CG++ A +FD +++ +
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM 483
WS+M GY G+ EA+ L+ M +V G L C RE ++ F
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLK-CKEMDSARELFDRF--- 235
Query: 484 RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHV 540
E ++ ++ GY +A +M P V +LLSAC + +
Sbjct: 236 ----TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDL 291
Query: 541 TLGEYAAKKLFSLDPYNTGHYV------QLSNLYASSRLWDHVAHVRVLMREKGLSKDLG 594
G+ + ++ YV L ++YA D V ++++ LS
Sbjct: 292 ETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLST--- 348
Query: 595 YSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFV 637
++ + + L + H S E++ E+QRL+ E+ F+
Sbjct: 349 WNTLIVG--LALHHAEG-----SIEMFEEMQRLKVWPNEVTFI 384
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/566 (34%), Positives = 322/566 (56%), Gaps = 21/566 (3%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
+ Q+H Q+I L + + KL++ S A ++F++ P+V L N++IR ++
Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHA 93
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+++ ++ M+R G+ D FT+P++LKAC+ + ++H + + G D++
Sbjct: 94 QNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIY 153
Query: 191 VQNGLVAMYAKCGNIGM--ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
V N L+ Y++CG +G+ A +F+ +++R VSW S++ G + GE +A RLF++M
Sbjct: 154 VPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI----SLTAFYAKCG 304
D+ I+ +++ Y ++ + L FE P+ ++ Y+K G
Sbjct: 214 RDL----ISWNTMLDGYARCREMSKAFEL--------FEKMPERNTVSWSTMVMGYSKAG 261
Query: 305 QVIVARSFFDQMK--TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA 362
+ +AR FD+M +V+ W +I+GYA+ G +EA L +M+ +K D+ V S
Sbjct: 262 DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 363 ALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
A + G L L + + +S S+ +V AL+DMYAKCGN++ A VF+ +KD+
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL 381
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
+ W+ M+ G G+HG G EAI L+ MR+ G+ P+ VTFI +L +CNH+GL+ EG + F+
Sbjct: 382 VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYS 441
Query: 483 M-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVT 541
M + + + P+ EHY C+VDLLGR G L +A + M +EP V +WGALL AC++H V
Sbjct: 442 MEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVD 501
Query: 542 LGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEIN 601
+ + L LDP + G+Y LSN+YA++ W+ VA +R M+ G+ K G S +E+
Sbjct: 502 IAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELE 561
Query: 602 GKLQVFHVGDKSHPRSDEIYNEIQRL 627
+ F V DKSHP+SD+IY + L
Sbjct: 562 DGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 11/267 (4%)
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
+L Q + LH II+ ++ + L + + C Q +A F+Q++ +V + N++I
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+A+N +A +F EM + D+ T A + L + + M +++ K +S
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 390 DIFVNTALIDMYAKCG--NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA 447
DI+V ALID Y++CG V A +F++ SE+D + W++M+ G G+ +A L+
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 448 MRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGY 507
M Q + +++ +L + + +ELF M E +S +V +AG
Sbjct: 211 MPQRDL----ISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYSKAGD 262
Query: 508 LDQAYDFIMKMSIEP-GVSVWGALLSA 533
++ A KM + V W +++
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAG 289
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 314/566 (55%), Gaps = 5/566 (0%)
Query: 85 KHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGL 144
K + L T L+ G + AR LFDE DV W A+I GY+ SN E +
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 145 MRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG- 203
M ++G P+ FT VLK+C + LVHG V++ G ++V N ++ MYA C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
+ A ++F + + V+WT++I+G+ G+ + L+++ QM + ++ + VR
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
A +D + G+ +H +IK GF+ ++ S+ Y +CG + A+ +F +M+ +I
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
WN +IS ++ + EA+ +F+ ++ P+ T S A A + +L Q + +
Sbjct: 282 WNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIF 340
Query: 384 KSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ + ++ + ALIDMYAKCGN+ +S R+ + ++++ W++M++GYG HG G EA+
Sbjct: 341 RRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAV 400
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDL 501
L+ M +G+ P+ + F+ +L+AC H+GLV +G + F+ M +GI P + Y+CVVDL
Sbjct: 401 ELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDL 460
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTL-GEYAAKKLFSLDPYNTGH 560
LGRAG + +AY+ + +M +P S WGA+L ACK H+H L AA+K+ L P G
Sbjct: 461 LGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGT 520
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
YV LS +YA+ W A VR +MR G K+ G S I + ++ F V DK P + +
Sbjct: 521 YVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSV 580
Query: 621 YNEIQRLERRLKEIGFVPHTESVLHD 646
Y+ + L +E G+VP +S+++D
Sbjct: 581 YSVLGLLIEETREAGYVPELDSLVND 606
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF-SHPDVFLWNAIIRGYSR 131
Q+H ++ G N L L++ + G+I ++++F E ++ W +++ GY
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV-------IRYG 184
+E++ M G+ PD F VL AC R + LV + YG
Sbjct: 393 HGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC------RHAGLVEKGLKYFNVMESEYG 446
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS-WTSII---SGYAQNG-----E 235
PD + N +V + + G IG A + + + + S W +I+ + NG
Sbjct: 447 INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLA 506
Query: 236 ALEALRLFNQMRNTDVKLDWI 256
A + + L +M T V L +I
Sbjct: 507 ARKVMELKPKMVGTYVMLSYI 527
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 358 bits (919), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/599 (33%), Positives = 331/599 (55%), Gaps = 41/599 (6%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--EFSHPDVFLWNAIIRGYSR 131
Q+H I SG++++ L+ KLV S A+ + + + HP WN +I Y++
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP--LPWNVLIASYAK 121
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ LF I Y M +G+ PD FT+P VLKAC E LD +VHG + + ++V
Sbjct: 122 NELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYV 181
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG---EALE---------- 238
N L++MY + N+G+AR +FD + +R VSW ++I+ YA G EA E
Sbjct: 182 CNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGV 241
Query: 239 ----------------------ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
AL L ++MRN LD +A++ ++A + + G+
Sbjct: 242 EVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKE 301
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+HG I ++ ++ +L Y+KC + A F Q + +S+ WN++ISGYA+
Sbjct: 302 IHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD-IFVNT 395
+EEA L REM+ +P+S+T+ S A++ +L+ + Y+ + + D +
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
+L+D+YAK G + +A+ V D S++D + ++++I GYG G+G A+ L+ M ++G+ P
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
+ VT + +L+AC+HS LV EG LF M+ +GI P +H+SC+VDL GRAG+L +A D
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 515 IMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLW 574
I M +P + W LL+AC IH + +G++AA+KL + P N G+YV ++N+YA++ W
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSW 601
Query: 575 DHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKE 633
+A VR +MR+ G+ KD G + I+ + +F VGD S P + Y + L + +K+
Sbjct: 602 SKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKD 660
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 170/398 (42%), Gaps = 41/398 (10%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
+L AC ++ F VH I G + LV Y+ A+ + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
+ W +I+ YA+N E + + +M + ++ D S+++A G+ D+ GR +HG
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
I ++ + +L + Y + + +AR FD+M + WNA+I+ YA G E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 340 AVDLFREM---------ITRNI--------------------------KPDSVTVRSAAL 364
A +LF +M IT NI D V +
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLK 288
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIM 424
A + +G+++L + + S Y V LI MY+KC ++ A IVF +T E +
Sbjct: 289 ACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCT 348
Query: 425 WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC-- 482
W+++I GY + EA +L M AG PN +T +L C ++ G E FHC
Sbjct: 349 WNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE-FHCYI 407
Query: 483 MRGFGIEPRNEHYSCVVDLLGRAGYL---DQAYDFIMK 517
+R + ++ +VD+ ++G + Q D + K
Sbjct: 408 LRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK 445
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 5/261 (1%)
Query: 231 AQNGEALEALRLFNQMR---NTDVKLDWI--ALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
A +G +A + F+ +R ++ V D + + S++ A DV G +H I G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 286 FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFR 345
E L+ L FY+ A+S + + WN +I+ YAKN EE + ++
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
M+++ I+PD+ T S A + + + + + S Y S ++V ALI MY +
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFR 193
Query: 406 NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
N+ AR +FDR E+D + W+A+I Y G EA L+ M +GV + +T+ +
Sbjct: 194 NMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISG 253
Query: 466 ACNHSGLVREGWELFHCMRGF 486
C +G L MR F
Sbjct: 254 GCLQTGNYVGALGLISRMRNF 274
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/560 (36%), Positives = 307/560 (54%), Gaps = 10/560 (1%)
Query: 54 NLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE 113
+L+ + L+ L QI Q+++ ++ FLI K V LG Y+ LF
Sbjct: 35 DLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVE----LGDFNYSSFLFSV 90
Query: 114 FSHPDVFLWNAIIRGYSRS-NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL 172
P+ + +N +IRG + + N + +Y M+ G+ PD FT+ +V AC +L + +
Sbjct: 91 TEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQ 232
VH + + G DV + + L+ MYAKCG +G AR +FD + +R VSW S+ISGY++
Sbjct: 151 GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSE 210
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
G A +A+ LF +M + D LVS++ A + DL GR L I L
Sbjct: 211 AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFL 270
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
L + Y KCG + AR F+QM + W AMI+ Y++NG + EA LF EM +
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGV 330
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARI 412
PD+ T+ + A VG+L+L + ++ + S+ +I+V T L+DMY KCG VE A
Sbjct: 331 SPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 413 VFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGL 472
VF+ K+ W+AMI Y G EA+ L+ M V P+D+TFIG+L+AC H+GL
Sbjct: 391 VFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGL 447
Query: 473 VREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
V +G FH M FG+ P+ EHY+ ++DLL RAG LD+A++F+ + +P + A+L
Sbjct: 448 VHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAIL 507
Query: 532 SACKIHRHVTLGEYAAKKLFSL-DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLS 590
AC + V + E A + L + + N G+YV SN+ A ++WD A +R LMR++G+
Sbjct: 508 GACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVV 567
Query: 591 KDLGYSVIEINGKLQVFHVG 610
K G S IEI G+L F G
Sbjct: 568 KTPGCSWIEIEGELMEFLAG 587
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 335/573 (58%), Gaps = 14/573 (2%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY--GLMR 146
F+++ ++ + LG I +R++FD ++ +WN +I Y +++ +IE++ +
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGS 311
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
+E V D T+ A + L L HG V + + + N L+ MY++CG++
Sbjct: 312 KEIVS-DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVH 370
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG 266
+ VF + +R VVSW ++IS + QNG E L L +M+ K+D+I + +++ A
Sbjct: 371 KSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS 430
Query: 267 DVDDLEQGRSLHGCIIKMG--FEDEPDLLISLTAFYAKCGQVIVARSFFDQ--MKTSSVI 322
++ + E G+ H +I+ G FE LI + Y+K G + +++ F+
Sbjct: 431 NLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDM---YSKSGLIRISQKLFEGSGYAERDQA 487
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
WN+MISGY +NGH E+ +FR+M+ +NI+P++VTV S A +Q+GS+ L + + +
Sbjct: 488 TWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFS 547
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ ++FV +AL+DMY+K G ++ A +F +T E++ + ++ MI+GYG HG G AI
Sbjct: 548 IRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAI 607
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDL 501
+L+ +M+++G+ P+ +TF+ +L+AC++SGL+ EG ++F MR + I+P +EHY C+ D+
Sbjct: 608 SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVS-VWGALLSACKIHRHVTLGEYAAKKLFSLDPYN--T 558
LGR G +++AY+F+ + E ++ +WG+LL +CK+H + L E +++L D +
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFS 727
Query: 559 GHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSD 618
G+ V LSN+YA + W V VR MREKGL K++G S IEI G + F D+ HP S
Sbjct: 728 GYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSS 787
Query: 619 EIYNEIQRLERRLKEIGFVPHTESVLHDLNYEE 651
EIY+ I L + ++ F+ +V L +E
Sbjct: 788 EIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 228/501 (45%), Gaps = 58/501 (11%)
Query: 99 SNLGHIC------YARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG--V 150
S L IC AR+LFD P LWN II G+ +NL + Y M++
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 151 DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNI----- 205
+ D +T+ LKAC E + + VH +IR V N L+ MY C N
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 206 -GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
+ R VFD + + VV+W ++IS Y + G EA R F M +VK ++ V++ A
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVI 322
+++ +G ++K+G E DL + S + YA+ G + +R FD ++
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMI-TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+WN MI Y +N E+++LF E I ++ I D VT AA A + + ++L + +
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
VSK+ I + +L+ MY++CG+V + VF E+DV+ W+ MI + +G E
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNH-------------------------------- 469
+ L + M++ G + +T LL+A ++
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMY 463
Query: 470 --SGLVREGWELFHCMRGFGIEPRNE-HYSCVVDLLGRAGYLDQAYDFIMKM---SIEPG 523
SGL+R +LF G G R++ ++ ++ + G+ ++ + KM +I P
Sbjct: 464 SKSGLIRISQKLFE---GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 524 VSVWGALLSACKIHRHVTLGE 544
++L AC V LG+
Sbjct: 521 AVTVASILPACSQIGSVDLGK 541
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H I L N F+ + LV+ S G I YA +F + + + +I GY +
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKAC--TELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ I ++ M+ G+ PD TF VL AC + L+D L + + Y P
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV-YNIQPSSEH 660
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVS--WTSIISGYAQNGE 235
+ M + G + A GL + ++ W S++ +GE
Sbjct: 661 YCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGE 706
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 301/545 (55%), Gaps = 17/545 (3%)
Query: 83 GLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH-PDVFLWNAIIRGYSRSNLFRNTIEM 141
++ N + TK + S++ I YARKLFD+ D FL N++I+ Y + + ++ +
Sbjct: 5 AIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFAL 64
Query: 142 YGLMRREGV-DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYA 200
Y +R+E PD FTF + K+C+ + +H Q+ R+GF D++V G+V MYA
Sbjct: 65 YRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 201 KCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVS 260
K G +G AR FD + R+ VSWT++ISGY + GE A +LF+QM + D + +
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNA 181
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF---YAKCGQVIVARSFFDQMK 317
++ + D+ R L E +I+ T Y + AR FD M
Sbjct: 182 MMDGFVKSGDMTSARRLFD-------EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
+++ WN MI GY +N +E + LF+EM T ++ PD VT+ S A + G+L L +
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHG 436
W +V + + + V TA++DMY+KCG +E A+ +FD EK V W+AMI GY L+G
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 437 QGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYS 496
A++L+ M P+++T + ++TACNH GLV EG + FH MR G+ + EHY
Sbjct: 355 NARAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 497 CVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPY 556
C+VDLLGRAG L +A D I M EP + + LSAC ++ + E KK L+P
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQ 473
Query: 557 NTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPR 616
N G+YV L NLYA+ + WD V+ +MR+ K++G S+IEIN + F GD +HP
Sbjct: 474 NDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPH 533
Query: 617 SDEIY 621
I+
Sbjct: 534 RRSIH 538
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 173/369 (46%), Gaps = 24/369 (6%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR-- 131
Q+H+Q+ G + ++ T +V+ + G + AR FDE H W A+I GY R
Sbjct: 99 QLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCG 158
Query: 132 -----SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG 186
S LF + ++ + DGF + + L D + H VI +
Sbjct: 159 ELDLASKLFDQMPHVKDVVIYNAM-MDGFVKSGDMTSARRLFDE----MTHKTVITW--- 210
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
++ Y +I AR +FD + +R +VSW ++I GY QN + E +RLF +M
Sbjct: 211 ------TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 247 R-NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
+ T + D + ++S++ A D L G H + + + + + ++ Y+KCG+
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ A+ FD+M V WNAMI GYA NG+A A+DLF M+ KPD +T+ + A
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITA 383
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR-IVFDRTSEKDVIM 424
G ++ + + + + I ++D+ + G+++ A ++ + E + I+
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGII 443
Query: 425 WSAMIMGYG 433
S+ + G
Sbjct: 444 LSSFLSACG 452
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 311/536 (58%), Gaps = 4/536 (0%)
Query: 102 GHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM-RREGVDPDGFTFPYV 160
G + A ++FDE PD+ W++++ G+ ++ +E + M V PD T +
Sbjct: 110 GRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITL 169
Query: 161 LKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV 220
+ ACT+L + RL VHG VIR GF D+ + N L+ YAK A +F + ++ V
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDV 229
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
+SW+++I+ Y QNG A EAL +FN M + + + ++ +++A DLEQGR H
Sbjct: 230 ISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
I+ G E E + +L Y KC A + F ++ V+ W A+ISG+ NG A +
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRS 349
Query: 341 VDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
++ F M+ N +PD++ + + +++G L+ A+ YV K + S+ F+ +L++
Sbjct: 350 IEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVE 409
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY-HAMRQAGVCPNDV 458
+Y++CG++ +A VF+ + KD ++W+++I GYG+HG+G +A+ + H ++ + V PN+V
Sbjct: 410 LYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEV 469
Query: 459 TFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
TF+ +L+AC+H+GL+ EG +F M + + P EHY+ +VDLLGR G LD A + +
Sbjct: 470 TFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKR 529
Query: 518 MSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHV 577
M P + G LL AC+IH++ + E AKKLF L+ + G+Y+ +SN+Y W++V
Sbjct: 530 MPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENV 589
Query: 578 AHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKE 633
+R ++++G+ K L S+IEI K+ F D+ HP + +Y ++ L+ +KE
Sbjct: 590 EKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 223/434 (51%), Gaps = 4/434 (0%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
AR++F E + ++ WN +++ SR + + + M R+ PD FT P LKAC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 167 LLDFRLSCLVHGQVIR-YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
L + ++HG V + G D++V + L+ MY KCG + A +FD L +V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 226 IISGYAQNGEALEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
++SG+ +NG +A+ F +M +DV D + L+++V A + + GR +HG +I+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
GF ++ L+ SL YAK A + F + VI W+ +I+ Y +NG A EA+ +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
+M+ +P+ TV A A L+ + + + +++ V+TAL+DMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGL 463
+ E A VF R KDV+ W A+I G+ L+G +I + M + P+ + + +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
L +C+ G + + + +G + + +V+L R G L A ++++
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDT 432
Query: 524 VSVWGALLSACKIH 537
V VW +L++ IH
Sbjct: 433 V-VWTSLITGYGIH 445
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 6/193 (3%)
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
F K + AR F +M S+ WN ++ ++ EE + F M KPD+
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKS-EYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ A A ++ + + + +V K SD++V ++LI MY KCG + A +FD
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACNHSGLVRE 475
+ D++ WS+M+ G+ +G ++A+ + M A V P+ VT I L++AC R
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 476 GWELFHCMRGFGI 488
G C+ GF I
Sbjct: 182 G----RCVHGFVI 190
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 323/570 (56%), Gaps = 17/570 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+ + ++ +GL+ + + + S G AR++FDE S D+ WN+++ G S+
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 134 LFR-NTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
F + ++ M REGV+ D +F V+ C D +L+ +HG I+ G+ + V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L++ Y+KCG + + VF +++R VVSWT++IS +A+ +F MR V
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVY 369
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ + V ++ A + +++G +HG IK GF EP + S YAK + A+
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA--ALASAQVG 370
F+ + +I WNAMISG+A+NG + EA+ +F + P+ T S A+A A+
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDI 488
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
S+K Q ++ K S V++AL+DMYAK GN++ + VF+ S+K+ +W+++I
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIE 489
Y HG +NL+H M + V P+ VTF+ +LTACN G+V +G+E+F+ M + +E
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
P +EHYSC+VD+LGRAG L +A + + ++ PG S+ ++L +C++H +V +G A+
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING-----KL 604
+ P +G YVQ+ N+YA WD A +R MR+K +SK+ G+S I++ +
Sbjct: 669 AMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTM 728
Query: 605 QVFHVGDKSHPRSDEIYN--EIQRLERRLK 632
Q F GDKSHP+SDEIY EI LE L+
Sbjct: 729 QGFSSGDKSHPKSDEIYRMVEIIGLEMNLE 758
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 218/467 (46%), Gaps = 13/467 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
QIH SG + ++ G A +F+ PDV WN I+ G+ +
Sbjct: 97 QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQ 156
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ N + M+ GV D FT+ L C F L + V++ G D+ V N
Sbjct: 157 IALNFVVR---MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGN 213
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE-ALEALRLFNQMRNTDVK 252
+ MY++ G+ AR VFD ++ + ++SW S++SG +Q G EA+ +F M V+
Sbjct: 214 SFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE 273
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
LD ++ S++ DL+ R +HG IK G+E ++ L + Y+KCG + +S
Sbjct: 274 LDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSV 333
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F QM +V+ W MIS + ++AV +F M + P+ VT A +
Sbjct: 334 FHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQI 388
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
K + K+ + S+ V + I +YAK +E A+ F+ + +++I W+AMI G+
Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGF 448
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSG--LVREGWELFHCMRGFGIEP 490
+G EA+ ++ + A PN+ TF +L A + V++G + G+
Sbjct: 449 AQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS 507
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
S ++D+ + G +D++ +MS + VW +++SA H
Sbjct: 508 CPVVSSALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSH 553
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 13/341 (3%)
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF 212
D T LKAC D + C +HG GF V V N ++ MY K G A +F
Sbjct: 77 DEVTLCLALKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF 134
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
+ L D VVSW +I+SG+ N AL +M++ V D + + +
Sbjct: 135 ENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
G L ++K G E + + S Y++ G AR FD+M +I WN+++SG +
Sbjct: 192 LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLS 251
Query: 333 KNG-HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
+ G EAV +FR+M+ ++ D V+ S LKLA+ + K Y S +
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
V L+ Y+KCG +E+ + VF + SE++V+ W+ MI +A++++ MR
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFD 366
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFH-CMR-GFGIEP 490
GV PN+VTF+GL+ A + ++EG ++ C++ GF EP
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 323/591 (54%), Gaps = 16/591 (2%)
Query: 52 GLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYA 107
G N+D F + SL+ L+ Q H+ +I L N F+ LV+ + G + A
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 108 RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
R++F+ D WN II Y + +++ M G+ DG LKACT +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 168 LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
VH ++ G D+ + L+ MY+KCG I AR VF L + +VVS ++I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+GY+QN EA+ LF +M V I +IV A + L G HG I K GF
Sbjct: 603 AGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 288 DEPDLL-ISLTAFYAKCGQVIVARSFFDQMKT-SSVIMWNAMISGYAKNGHAEEAVDLFR 345
E + L ISL Y + A + F ++ + S+++W M+SG+++NG EEA+ ++
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
EM + PD T + + + SL+ + + + + D + LIDMYAKCG
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781
Query: 406 NVESARIVFDRTSEK-DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
+++ + VFD + +V+ W+++I GY +G +A+ ++ +MRQ+ + P+++TF+G+L
Sbjct: 782 DMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVL 841
Query: 465 TACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
TAC+H+G V +G ++F M G +GIE R +H +C+VDLLGR GYL +A DFI +++P
Sbjct: 842 TACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPD 901
Query: 524 VSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVL 583
+W +LL AC+IH GE +A+KL L+P N+ YV LSN+YAS W+ +R +
Sbjct: 902 ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKV 961
Query: 584 MREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEI 634
MR++G+ K GYS I++ + +F GDKSH +EI ++E L+++
Sbjct: 962 MRDRGVKKVPGYSWIDVEQRTHIFAAGDKSH-------SEIGKIEMFLEDL 1005
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 230/461 (49%), Gaps = 3/461 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H + I GL N ++ + LV+ S + A K+F+ + WNA+IRGY+ +
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+E++ M+ G + D FTF +L C D + H +I+ ++FV N
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
LV MYAKCG + AR +F+ + DR V+W +II Y Q+ EA LF +M + D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
L S ++A V L QG+ +H +K G + + SL Y+KCG + AR F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+ SV+ NA+I+GY++N + EEAV LF+EM+TR + P +T + A + SL L
Sbjct: 589 SLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 375 AQWMDDYVSKSEYASD-IFVNTALIDMYAKC-GNVESARIVFDRTSEKDVIMWSAMIMGY 432
++K ++S+ ++ +L+ MY G E+ + + +S K +++W+ M+ G+
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
+G EA+ Y MR GV P+ TF+ +L C+ +REG + + +
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ ++D+ + G + + +M V W +L++
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 213/454 (46%), Gaps = 6/454 (1%)
Query: 83 GLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY 142
G + + ++N LG + AR LF E S PDV WN +I G+ + IE +
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 143 GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
MR+ V T VL A + + L +VH + I+ G +++V + LV+MY+KC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
+ A VF+ L ++ V W ++I GYA NGE+ + + LF M+++ +D S++
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
DLE G H IIK + +L YAKCG + AR F++M +
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
WN +I Y ++ + EA DLF+ M I D + S A V L + +
Sbjct: 496 TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS 555
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
K D+ ++LIDMY+KCG ++ AR VF E V+ +A+I GY EA+
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAV 614
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH---CMRGFGIEPRNEHYSCVV 499
L+ M GV P+++TF ++ AC+ + G + FH RGF E S +
Sbjct: 615 VLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLGISLLG 673
Query: 500 DLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ G + +A ++S + +W ++S
Sbjct: 674 MYMNSRG-MTEACALFSELSSPKSIVLWTGMMSG 706
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 211/460 (45%), Gaps = 39/460 (8%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H++ ++ G+ G L +V+ + + YA K FD F DV WN+++ YS
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGK 140
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ + + + P+ FTF VL C + +H +I+ G + +
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGA 200
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
LV MYAKC I AR VF+ + D V WT + SGY + G EA+ +F +MR+ + D
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPD 260
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+A V+++ Y + G++ AR F
Sbjct: 261 HLAFVTVINT-----------------------------------YIRLGKLKDARLLFG 285
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+M + V+ WN MISG+ K G A++ F M ++K T+ S A V +L L
Sbjct: 286 EMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDL 345
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ K AS+I+V ++L+ MY+KC +E+A VF+ EK+ + W+AMI GY
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
+G+ + + L+ M+ +G +D TF LL+ C S + G + FH + +N
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLF 464
Query: 495 Y-SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ +VD+ + G L+ A +M V+ W ++ +
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 168 LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
L R+ VH + + G + + N +V +YAKC + A FD L ++ V +W S++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
S Y+ G+ + LR F + + + ++ ++E GR +H +IKMG E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
+L YAKC ++ AR F+ + + + W + SGY K G EEAV +F M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV 407
+PD + FV +I+ Y + G +
Sbjct: 253 RDEGHRPDHLA---------------------------------FVT--VINTYIRLGKL 277
Query: 408 ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
+ AR++F S DV+ W+ MI G+G G AI + MR++ V T +L+A
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
L G+++H + +G + E L ++ YAKC QV A FD ++ V WN+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
Y+ G + + F + I P+ T A+ +++ + + + K +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
+ AL+DMYAKC + AR VF+ + + + W+ + GY G EA+ ++ MR
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
G P+ + F+ ++ G +++ LF M P ++ ++ G+ G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETV 310
Query: 511 AYDFIMKM---SIEPGVSVWGALLSACKIHRHVTLG 543
A ++ M S++ S G++LSA I ++ LG
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 345 bits (884), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 326/600 (54%), Gaps = 23/600 (3%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHP 117
+AS++ +STH L ++ L+ + G + A ++ + ++
Sbjct: 306 IHASVLKSSTHSSEL----------------YVCNALIAMYTRCGKMPQAERILRQMNNA 349
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
DV WN++I+GY ++ +++ +E + M G D + ++ A L + +H
Sbjct: 350 DVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH 409
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL 237
VI++G+ ++ V N L+ MY+KC F ++D+ ++SWT++I+GYAQN +
Sbjct: 410 AYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHV 469
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
EAL LF + +++D + L SI+RA + + + +H I++ G D + L
Sbjct: 470 EALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELV 528
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
Y KC + A F+ +K V+ W +MIS A NG+ EAV+LFR M+ + DSV
Sbjct: 529 DVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSV 588
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
+ A+A + +L + + Y+ + + + + A++DMYA CG+++SA+ VFDR
Sbjct: 589 ALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRI 648
Query: 418 SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW 477
K ++ +++MI YG+HG G A+ L+ MR V P+ ++F+ LL AC+H+GL+ EG
Sbjct: 649 ERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR 708
Query: 478 ELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKI 536
M + +EP EHY C+VD+LGRA + +A++F+ M EP VW ALL+AC+
Sbjct: 709 GFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRS 768
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
H +GE AA++L L+P N G+ V +SN++A W+ V VR M+ G+ K G S
Sbjct: 769 HSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCS 828
Query: 597 VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRL-KEIGFVPHTESVLHDLNYEEKEEN 655
IE++GK+ F DKSHP S EIY ++ + R+L +E G + + N EK E
Sbjct: 829 WIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKG----KRELAREFNAREKMET 884
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 233/470 (49%), Gaps = 14/470 (2%)
Query: 53 LNLDSFYASLIDNSTHK--RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKL 110
L L SF A L + + R ++H+ L+ G GF++ LV+ + + AR+L
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 111 FDEFSHP-DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD 169
FD F D LWN+I+ YS S T+E++ M G P+ +T L AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 170 FRLSCLVHGQVIRYG-FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIIS 228
+L +H V++ +++V N L+AMY +CG + A + +N+ VV+W S+I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 229 GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
GY QN EAL F+ M K D +++ SI+ A G + +L G LH +IK G++
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+ +L Y+KC F +M +I W +I+GYA+N EA++LFR++
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ ++ D + + S AS+ + S+ + + + ++ + D + L+D+Y KC N+
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL-DTVIQNELVDVYGKCRNMG 538
Query: 409 SARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACN 468
A VF+ KDV+ W++MI L+G EA+ L+ M + G+ + V + +L+A
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 469 HSGLVREGWELFHC---MRGFGIEPR-----NEHYSCVVDLLGRAGYLDQ 510
+ +G E+ HC +GF +E + Y+C DL D+
Sbjct: 599 SLSALNKGREI-HCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDR 647
Score = 196 bits (497), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 185/359 (51%), Gaps = 2/359 (0%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
FL KLV G + A K+FDE F WN +I Y + + + +Y MR E
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
GV +FP +LKAC +L D R +H +++ G+ F+ N LV+MYAK ++ A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 209 RVVFDGLNDR-TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
R +FDG ++ V W SI+S Y+ +G++LE L LF +M T + +VS + A
Sbjct: 237 RRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
Query: 268 VDDLEQGRSLHGCIIKMG-FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNA 326
+ G+ +H ++K E + +L A Y +CG++ A QM + V+ WN+
Sbjct: 297 FSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNS 356
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
+I GY +N +EA++ F +MI K D V++ S AS ++ +L + YV K
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
+ S++ V LIDMY+KC F R +KD+I W+ +I GY + EA+ L+
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 171/338 (50%), Gaps = 16/338 (4%)
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRY--GFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
F YVL+ C + +H ++ + F D F+ LV MY KCG++ A VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 214 GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+ DRT +W ++I Y NGE AL L+ MR V L + ++++A + D+
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS-SVIMWNAMISGYA 332
G LH ++K+G+ ++ +L + YAK + AR FD + ++WN+++S Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE-YASDI 391
+G + E ++LFREM P+S T+ SA A KL + + V KS ++S++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
+V ALI MY +CG + A + + + DV+ W+++I GY + EA+ + M A
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 452 GVCPNDVTFIGLLTACN-----------HSGLVREGWE 478
G ++V+ ++ A H+ +++ GW+
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/567 (32%), Positives = 315/567 (55%), Gaps = 4/567 (0%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
L +H+ ++ G + ++ ++N H+ A+ LFD+ D+ WN +I GY+
Sbjct: 162 QLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+++ MR +G+ PD TF L + D + ++H Q+++ GF D+
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH 281
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
++ L+ MY KCG + V + + ++ VV WT +ISG + G A +AL +F++M +
Sbjct: 282 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG 341
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
L A+ S+V + + + G S+HG +++ G+ + L SL YAKCG + +
Sbjct: 342 SDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP-DSVTVRSAALASAQV 369
F++M ++ WNA+ISGYA+N +A+ LF EM + ++ DS TV S A +
Sbjct: 402 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
G+L + + + V +S V+TAL+DMY+KCG +E+A+ FD S KDV+ W +I
Sbjct: 462 GALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILI 521
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGI 488
GYG HG+G A+ +Y +G+ PN V F+ +L++C+H+G+V++G ++F M R FG+
Sbjct: 522 AGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGV 581
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAK 548
EP +EH +CVVDLL RA ++ A+ F + P + V G +L AC+ + + + +
Sbjct: 582 EPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICE 641
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFH 608
+ L P + GHYV+L + +A+ + WD V+ MR GL K G+S IE+NGK F
Sbjct: 642 DMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFF 701
Query: 609 VGDKSHPRSDEIYNEIQRLERRLKEIG 635
+ SH SD+ + ++ L R + + G
Sbjct: 702 MNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/466 (32%), Positives = 248/466 (53%), Gaps = 9/466 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH Q++V+G + ++ + LVN + G + +ARK+F+E DV W A+I YSR+ +
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ MR +G+ P T +L E+ +L CL H + YGF D+ V N
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT--QLQCL-HDFAVIYGFDCDIAVMNS 184
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
++ +Y KC ++G A+ +FD + R +VSW ++ISGYA G E L+L +MR ++ D
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+ + G + DLE GR LH I+K GF+ + L +L Y KCG+ + +
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+ V+ W MISG + G AE+A+ +F EM+ S + S + AQ+GS L
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ YV + Y D +LI MYAKCG+++ + ++F+R +E+D++ W+A+I GY
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQ 424
Query: 435 HGQGWEAINLYHAMRQAGVCPND-VTFIGLLTACNHSGLVREGWELFHC--MRGFGIEPR 491
+ +A+ L+ M+ V D T + LL AC+ +G + G +L HC +R F I P
Sbjct: 425 NVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSF-IRPC 482
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
+ + +VD+ + GYL+ A +S + VS WG L++ H
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFH 527
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 4/412 (0%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
+N+ I S + + + M + PD FTFP +LKAC L +H QV+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
GF D ++ + LV +YAK G + AR VF+ + +R VV WT++I Y++ G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
L N+MR +K + L+ ++ V ++ Q + LH + GF+ + ++ S+ Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
KC V A+ FDQM+ ++ WN MISGYA G+ E + L M ++PD T +
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+ S + L++ + + + K+ + D+ + TALI MY KCG E++ V + KD
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
V+ W+ MI G G+ +A+ ++ M Q+G + ++ +C G G +
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ G + ++ + + G+LD++ +M+ VS W A++S
Sbjct: 371 YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS-WNAIISG 421
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 85/155 (54%), Gaps = 4/155 (2%)
Query: 316 MKTSSVI----MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
++TSSV+ +N+ I+ + +G ++ + F M+ + PD+ T S A A +
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L + V + ++SD +++++L+++YAK G + AR VF+ E+DV+ W+AMI
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
Y G EA +L + MR G+ P VT + +L+
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 301/554 (54%), Gaps = 7/554 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITK--LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR 131
Q+H Q+I L+ + LI + L+ + A ++F D+ W++II G+S+
Sbjct: 189 QLHAQVI--KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 132 SNLFRNTIEMYGLMRREGV-DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+ M GV P+ + F LKAC+ LL +HG I+ +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
L MYA+CG + AR VFD + SW II+G A NG A EA+ +F+QMR++
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
D I+L S++ A L QG +H IIK GF + + SL Y C +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 311 SFFDQMKTSS-VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
+ F+ + ++ + WN +++ ++ E + LF+ M+ +PD +T+ + ++
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
SLKL + Y K+ A + F+ LIDMYAKCG++ AR +FD +DV+ WS +I
Sbjct: 487 SSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGI 488
+GY G G EA+ L+ M+ AG+ PN VTF+G+LTAC+H GLV EG +L+ M+ GI
Sbjct: 547 VGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGI 606
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAK 548
P EH SCVVDLL RAG L++A FI +M +EP V VW LLSACK +V L + AA+
Sbjct: 607 SPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAE 666
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFH 608
+ +DP+N+ +V L +++ASS W++ A +R M++ + K G S IEI K+ +F
Sbjct: 667 NILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFF 726
Query: 609 VGDKSHPRSDEIYN 622
D HP D+IY
Sbjct: 727 AEDIFHPERDDIYT 740
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 232/481 (48%), Gaps = 12/481 (2%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y SLI + R L Q IH+ ++ S K++ L +++ G + AR++FD
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
++ + ++I GYS++ I +Y M +E + PD F F ++KAC D L
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H QVI+ + QN L+AMY + + A VF G+ + ++SW+SII+G++Q G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGF 249
Query: 236 ALEALRLFNQMRNTDV-KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
EAL +M + V + S ++A + + G +HG IK
Sbjct: 250 EFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGC 309
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
SL YA+CG + AR FDQ++ WN +I+G A NG+A+EAV +F +M + P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 355 DSVTVRSAALASAQVGSLKLAQWMD--DYVSKSEYASDIFVNTALIDMYAKCGNVESARI 412
D++++RS L AQ + L+Q M Y+ K + +D+ V +L+ MY C ++
Sbjct: 370 DAISLRS--LLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 413 VF-DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSG 471
+F D + D + W+ ++ H Q E + L+ M + P+ +T LL C
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS 487
Query: 472 LVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
++ G ++ HC G+ P + ++D+ + G L QA M VS W L
Sbjct: 488 SLKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS-WSTL 545
Query: 531 L 531
+
Sbjct: 546 I 546
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 180/361 (49%), Gaps = 2/361 (0%)
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGF-TFPYVLKACTELLDFRLSCLVHGQ 179
L N I +SN +R +E + ++ T+ ++ AC+ +H
Sbjct: 33 LMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDH 92
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
++ D + N +++MY KCG++ AR VFD + +R +VS+TS+I+GY+QNG+ EA
Sbjct: 93 ILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEA 152
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
+RL+ +M D+ D A SI++A D+ G+ LH +IK+ +L A
Sbjct: 153 IRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAM 212
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI-KPDSVT 358
Y + Q+ A F + +I W+++I+G+++ G EA+ +EM++ + P+
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS 418
S+ A + + + KSE A + +L DMYA+CG + SAR VFD+
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 419 EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWE 478
D W+ +I G +G EA++++ MR +G P+ ++ LL A + +G +
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 479 L 479
+
Sbjct: 393 I 393
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 144/303 (47%), Gaps = 12/303 (3%)
Query: 235 EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
EALEA F Q +N+ K+ +S++ A L QGR +H I+ + + L
Sbjct: 49 EALEAFD-FAQ-KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
+ + Y KCG + AR FD M +++ + ++I+GY++NG EA+ L+ +M+ ++ P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 355 DSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF 414
D S A A + L + + V K E +S + ALI MY + + A VF
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVF 226
Query: 415 DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC-PNDVTFIGLLTACNHSGLV 473
KD+I WS++I G+ G +EA++ M GV PN+ F L AC S L+
Sbjct: 227 YGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC--SSLL 284
Query: 474 REGWELFHCMRGFGIEPR---NEHYSC-VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGA 529
R + + G I+ N C + D+ R G+L+ A ++ P + W
Sbjct: 285 RPDYG--SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNV 341
Query: 530 LLS 532
+++
Sbjct: 342 IIA 344
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 342 bits (878), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 325/628 (51%), Gaps = 45/628 (7%)
Query: 59 YASLIDNSTHKR---HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y LI + T R H+ Q+H +++V +K + FL +KL++ + A +FDE +
Sbjct: 25 YGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT 84
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMY------GLMRREGVDPDGFTFPYVLKACTELLD 169
+ F +NA++ Y+ ++ + ++ + PD + VLKA + D
Sbjct: 85 VRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDD 144
Query: 170 FRLSCL---VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
F L L VHG VIR GF DVFV NG++ Y KC NI AR VFD +++R VVSW S+
Sbjct: 145 FWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSM 204
Query: 227 ISGYAQNGEALEALRLFNQMRN-TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
ISGY+Q+G + +++ M +D K + + ++S+ +A G DL G +H +I+
Sbjct: 205 ISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH 264
Query: 286 FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM---------------------- 323
+ + L ++ FYAKCG + AR+ FD+M +
Sbjct: 265 IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFS 324
Query: 324 ---------WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
WNAMISG +N H EE ++ FREMI +P++VT+ S + +LK
Sbjct: 325 EMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKG 384
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ + + ++ ++I+V T++ID YAK G + A+ VFD ++ +I W+A+I Y +
Sbjct: 385 GKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNE 493
HG A +L+ M+ G P+DVT +L+A HSG +F M + IEP E
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL 553
HY+C+V +L RAG L A +FI KM I+P VWGALL+ + + + +A +LF +
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEM 564
Query: 554 DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKS 613
+P NTG+Y ++NLY + W+ VR M+ GL K G S IE L+ F D S
Sbjct: 565 EPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSS 624
Query: 614 HPRSDEIYNEIQRLERRLKEIGFVPHTE 641
RS E+Y I+ L + + ++ E
Sbjct: 625 CERSKEMYEIIEGLVESMSDKEYIRKQE 652
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/536 (35%), Positives = 296/536 (55%), Gaps = 6/536 (1%)
Query: 69 KRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRG 128
K+ L IH I +G N L L++ G + +ARKLFD S DV W A+I
Sbjct: 28 KKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISR 87
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+SR + + ++ M RE V + FT+ VLK+C +L + +HG V + +
Sbjct: 88 FSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGN 147
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
+ V++ L+++YA+CG + AR+ FD + +R +VSW ++I GY N A + LF M
Sbjct: 148 LIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
K D S++RA V LE LHG IK+GF L+ SL Y KCG +
Sbjct: 208 EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLAN 267
Query: 309 ARSFFDQMKTSSVIMWNAMISGYA-KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
A + K ++ A+I+G++ +N +A D+F++MI K D V V S
Sbjct: 268 AWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Query: 368 QVGSLKLAQWMDDYVSK-SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
+ S+ + + + + K S+ D+ + +LIDMYAK G +E A + F+ EKDV W+
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWT 387
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RG 485
++I GYG HG +AI+LY+ M + PNDVTF+ LL+AC+H+G GW+++ M
Sbjct: 388 SLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINK 447
Query: 486 FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS--IEPGVSVWGALLSACKIHRHVTLG 543
GIE R EH SC++D+L R+GYL++AY I + S WGA L AC+ H +V L
Sbjct: 448 HGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLS 507
Query: 544 EYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKG-LSKDLGYSVI 598
+ AA +L S++P +Y+ L+++YA++ WD+ + R LM+E G +K GYS++
Sbjct: 508 KVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 291/535 (54%), Gaps = 14/535 (2%)
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD------VKLDWI 256
G++ A +F + W +II G+A + A + M ++D +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 257 ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM 316
++A LH I + G + L +L Y+K G +I A FD+M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 317 KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
V WNA+I+G A EA++L++ M T I+ VTV +A A + +G +K +
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR-TSEKDVIMWSAMIMGYGLH 435
+ S ++ V+ A IDMY+KCG V+ A VF++ T +K V+ W+ MI G+ +H
Sbjct: 231 NIFHGYSND----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 436 GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY 495
G+ A+ ++ + G+ P+DV+++ LTAC H+GLV G +F+ M G+E +HY
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY 346
Query: 496 SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDP 555
CVVDLL RAG L +A+D I MS+ P +W +LL A +I+ V + E A++++ +
Sbjct: 347 GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGV 406
Query: 556 YNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHP 615
N G +V LSN+YA+ W V VR M K + K G S IE G + F+ DKSH
Sbjct: 407 NNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHE 466
Query: 616 RSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLI---ST 672
+ EIY +I + +++E G+V T VLHD+ EEKE L HSE++AVAYGL+
Sbjct: 467 QWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGA 526
Query: 673 APGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+ +R+ NLR C +CH V K ISK+ +REIIVRD RFH FKDG CSC D+W
Sbjct: 527 DEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 194/431 (45%), Gaps = 45/431 (10%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVN--GSSNLGHICYARKLFDEFS 115
+ ++I + Q+ + + +G + FL ++L+ S G + +A ++F
Sbjct: 5 YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDP------DGFTFPYVLKACTELLD 169
P WNAIIRG++ S+ Y M ++ D T + LKAC L
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 170 FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISG 229
+H Q+ R G D + L+ Y+K G++ A +FD + R V SW ++I+G
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
A EA+ L+ +M ++ + +V+ + A + D+++G + I G+ ++
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN-----IFHGYSND 239
Query: 290 PDLLISLTA--FYAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFRE 346
++++S A Y+KCG V A F+Q SV+ WN MI+G+A +G A A+++F +
Sbjct: 240 -NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDK 298
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA---------- 396
+ IKPD V+ +A A G + EY +F N A
Sbjct: 299 LEDNGIKPDDVSYLAALTACRHAGLV-------------EYGLSVFNNMACKGVERNMKH 345
Query: 397 ---LIDMYAKCGNVESAR-IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
++D+ ++ G + A I+ + D ++W +++ ++ A +++ G
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMG 405
Query: 453 VCPNDVTFIGL 463
V ND F+ L
Sbjct: 406 V-NNDGDFVLL 415
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 338 bits (867), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 214/695 (30%), Positives = 351/695 (50%), Gaps = 41/695 (5%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVN-GSSNLGHICY-ARKLFDEFSHPDVFLWNAIIRGYSR 131
QIH ++ SG ++ F+ L++ + G C KLFDE DV WN ++ +
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 132 SNLFRNTIEMYGLMRR-EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+++ M R EG D FT +L +CT+ +HG+ IR G ++
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 191 VQNGLVAMYAKC-------------------------------GNIGMARVVFDGLNDRT 219
V N L+ Y+K G + A +F + ++
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
+++ ++++G+ +NG L+AL+LF M V+L +L S V A G V + + +HG
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS--SVIMWNAMISGYAKNGHA 337
IK G P + +L +C ++ A FDQ ++ S ++I GYA+NG
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 338 EEAVDLF-REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
++AV LF R + + + D V++ +G ++ + Y K+ Y SDI + +
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNS 561
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
LI MYAKC + + A +F+ E DVI W+++I Y L G EA+ L+ M + + P+
Sbjct: 562 LISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Query: 457 DVTFIGLLTACNH--SGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
+T +++A + S + +LF M+ + IEP EHY+ V +LG G L++A D
Sbjct: 622 IITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAED 681
Query: 514 FIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRL 573
I M ++P VSV ALL +C+IH + ++ + AK + S P Y+ SN+Y++S
Sbjct: 682 TINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGF 741
Query: 574 WDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKE 633
W +R MRE+G K S I K+ FH D SHP+ +IY ++ L +
Sbjct: 742 WHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLK 801
Query: 634 IGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIST-APGTILRITKNLRACVNCHS 692
+G+ P+TE VL +++ K+ L HS ++AV YG++S+ G +R+ KN+ C +CH
Sbjct: 802 VGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHE 861
Query: 693 VIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
K IS +V+REI++RD++ FHHF +G CSC D W
Sbjct: 862 FFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 220/469 (46%), Gaps = 48/469 (10%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITK---------LVNGSSNLGHICYARKLF 111
S+ID + L ++ + V+ H FL + L++ LG A +F
Sbjct: 78 SVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVF 137
Query: 112 DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDF 170
S P V + A+I G+SR NL ++++ MR+ G V P+ +TF +L AC + F
Sbjct: 138 VSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVV--FDGLNDRTVVSWTSIIS 228
L +HG +++ GF VFV N L+++Y K V+ FD + R V SW +++S
Sbjct: 198 SLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVS 257
Query: 229 GYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+ G++ +A LF +M + +D L +++ + D L +GR LHG I++G
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLM 317
Query: 288 DEPDLLISLTAFYAK-------------------------------CGQVIVARSFFDQM 316
E + +L FY+K G V A F +
Sbjct: 318 QELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV 377
Query: 317 KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
+ I +NA+++G+ +NGH +A+ LF +M+ R ++ ++ SA A V K+++
Sbjct: 378 TEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSE 437
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR--TSEKDVIMWSAMIMGYGL 434
+ + K A + + TAL+DM +C + A +FD+ ++ +++I GY
Sbjct: 438 QIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYAR 497
Query: 435 HGQGWEAINLYH-AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
+G +A++L+H + + + ++V+ +L C G G+++ HC
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI-HC 545
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 49 LDHGLNLDSF-YASLIDNS---THKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
L G+ L F S +D + K+ +QIH I G N + T L++ + +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 105 CYARKLFDEF-SHPDVF-LWNAIIRGYSRSNLFRNTIEMY-GLMRREGVDPDGFTFPYVL 161
A ++FD++ S+ D +II GY+R+ L + ++ + + + D + +L
Sbjct: 469 ADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
C L + +H ++ G+ D+ + N L++MYAKC + A +F+ + + V+
Sbjct: 529 AVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVI 588
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA--YGDVDDLEQGRSL 277
SW S+IS Y EAL L+++M ++K D I L ++ A Y + + L R L
Sbjct: 589 SWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDL 646
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/536 (36%), Positives = 294/536 (54%), Gaps = 20/536 (3%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK-LFDEFSHPDVFLWNAIIRGY 129
HL+QIH ++I GL+ + LI+ ++ SS+ +F+ P +LWN +I+GY
Sbjct: 25 HLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGY 84
Query: 130 SRSNLFRNTIEMYGLMRREGV-DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
S LF T+ + M R G+ PD +TFP V+K C+ R+ VHG V+R GF D
Sbjct: 85 SNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKD 144
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
V V V Y KC ++ AR VF + +R VSWT+++ Y ++GE EA +F+ M
Sbjct: 145 VVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE 204
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL-LISLTAF---YAKCG 304
++ W ALV + GD+ + K F++ P +IS T+ YAK G
Sbjct: 205 RNLG-SWNALVDGLVKSGDLVN-----------AKKLFDEMPKRDIISYTSMIDGYAKGG 252
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
++ AR F++ + V W+A+I GYA+NG EA +F EM +N+KPD +
Sbjct: 253 DMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS 312
Query: 365 ASAQVGSLKLAQWMDDYV-SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVI 423
A +Q+G +L + +D Y+ + S +V ALIDM AKCG+++ A +F+ ++D++
Sbjct: 313 ACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLV 372
Query: 424 MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM 483
+ +M+ G +HG G EAI L+ M G+ P++V F +L C S LV EG F M
Sbjct: 373 SYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELM 432
Query: 484 RG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTL 542
R + I +HYSC+V+LL R G L +AY+ I M E S WG+LL C +H + +
Sbjct: 433 RKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEI 492
Query: 543 GEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
E A+ LF L+P + G YV LSN+YA+ W VAH+R M E G++K G S I
Sbjct: 493 AEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 159/383 (41%), Gaps = 27/383 (7%)
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
N+ R +H ++ G + + T V+ + ARK+F E + W A
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDP-----DGFTFPYVLKACTELLDFRLSCLVHGQ 179
++ Y +S M+ LM + DG L +L D +
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDE----MPKRD 237
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+I Y ++ YAK G++ AR +F+ V +W+++I GYAQNG+ EA
Sbjct: 238 IISY---------TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI-IKMGFEDEPDLLISLTA 298
++F++M +VK D +V ++ A + E + + +M ++ +L
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALID 348
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
AKCG + A F++M ++ + +M+ G A +G EA+ LF +M+ I PD V
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN----TALIDMYAKCGNVESA-RIV 413
+ G +L + Y I + + ++++ ++ G ++ A ++
Sbjct: 409 F---TVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELI 465
Query: 414 FDRTSEKDVIMWSAMIMGYGLHG 436
E W +++ G LHG
Sbjct: 466 KSMPFEAHASAWGSLLGGCSLHG 488
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 299/550 (54%), Gaps = 2/550 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH ++ SG + + + LV + + ++FDE DV WN +I + +S
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+E++G M G +P+ + + AC+ LL +H + ++ GF D +V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
LV MY KC + +AR VF + +++V+W S+I GY G++ + + N+M +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
L SI+ A +L G+ +HG +I+ + + SL Y KCG+ +A + F
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+ + WN MIS Y G+ +AV+++ +M++ +KPD VT S A +Q+ +L+
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEK 428
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ + +S+S +D + +AL+DMY+KCGN + A +F+ +KDV+ W+ MI YG
Sbjct: 429 GKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNE 493
HGQ EA+ + M++ G+ P+ VT + +L+AC H+GL+ EG + F MR +GIEP E
Sbjct: 489 HGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIE 548
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKM-SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
HYSC++D+LGRAG L +AY+ I + + L SAC +H +LG+ A+ L
Sbjct: 549 HYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVE 608
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK 612
P + Y+ L NLYAS WD VR+ M+E GL K G S IE++ K+ F D+
Sbjct: 609 NYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDR 668
Query: 613 SHPRSDEIYN 622
SH R++ +Y
Sbjct: 669 SHLRAENVYE 678
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 260/496 (52%), Gaps = 6/496 (1%)
Query: 65 NSTHK-RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS-HPDVFLW 122
NST R + +H +++ GL+ + L L+N C AR +F+ F DV++W
Sbjct: 15 NSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIW 74
Query: 123 NAIIRGYSRSNLFRNTIEMYG-LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
N+++ GYS++++F +T+E++ L+ PD FTFP V+KA L L ++H V+
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
+ G+ DV V + LV MYAK + VFD + +R V SW ++IS + Q+GEA +AL
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
LF +M ++ + + ++L + A + LE+G+ +H +K GFE + + +L Y
Sbjct: 195 LFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYG 254
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
KC + VAR F +M S++ WN+MI GY G ++ V++ MI +P T+ S
Sbjct: 255 KCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTS 314
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+A ++ +L +++ YV +S +DI+VN +LID+Y KCG A VF +T +
Sbjct: 315 ILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDV 374
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
W+ MI Y G ++A+ +Y M GV P+ VTF +L AC+ + +G ++
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV- 540
+ +E S ++D+ + G +A+ + + VS W ++SA H
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHGQPR 493
Query: 541 -TLGEYAAKKLFSLDP 555
L ++ + F L P
Sbjct: 494 EALYQFDEMQKFGLKP 509
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 11/352 (3%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+IH + + G + + ++ + LV+ + AR++F + + WN++I+GY
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
++ +E+ M EG P T +L AC+ + +HG VIR D++V
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ +Y KCG +A VF SW +IS Y G +A+ +++QM + VK
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D + S++ A + LE+G+ +H I + E + LL +L Y+KCG A F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG--- 370
+ + V+ W MIS Y +G EA+ F EM +KPD VT+ + A G
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 371 -SLKLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVESARIVFDRTSE 419
LK M +S+Y + + + +ID+ + G + A + +T E
Sbjct: 529 EGLKFFSQM-----RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 575
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/531 (36%), Positives = 301/531 (56%), Gaps = 6/531 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH+ + S + ++ T LV+ + G + A K+FDE D+ WNA+I G+S
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 135 FRNTIEMYGLMRR-EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ I ++ MRR +G+ P+ T + A R VHG R GF D+ V+
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD--V 251
G++ +YAK I AR VFD + V+W+++I GY +N EA +F QM D
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ +A+ I+ DL GR +H +K GF + + ++ +FYAK G + A
Sbjct: 305 MVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFR 364
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
F ++ VI +N++I+G N EE+ LF EM T I+PD T+ A + + +
Sbjct: 365 QFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAA 424
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L Y YA + + AL+DMY KCG ++ A+ VFD ++D++ W+ M+ G
Sbjct: 425 LGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFG 484
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RG-FGIE 489
+G+HG G EA++L+++M++ GV P++VT + +L+AC+HSGLV EG +LF+ M RG F +
Sbjct: 485 FGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVI 544
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
PR +HY+C+ DLL RAGYLD+AYDF+ KM EP + V G LLSAC +++ LG +KK
Sbjct: 545 PRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKK 604
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
+ SL T V LSN Y+++ W+ A +R++ +++GL K GYS +++
Sbjct: 605 MQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 237/491 (48%), Gaps = 14/491 (2%)
Query: 58 FYASLIDNSTHKRHL---DQIHNQLIVSGLK-HNGFLITKLVNGSSNLGHICYARKLFDE 113
+ SL++ R+L IH L+ L + ++ L ++ + AR +FDE
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 114 FSHPDV--FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
HP + W+ +IR Y+ ++ +++Y M GV P +T+P+VLKAC L
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYA 231
L+H V F D++V LV YAKCG + MA VFD + R +V+W ++ISG++
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 232 QNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
+ + + LF MR D + + +V + A G L +G+++HG +MGF ++
Sbjct: 181 LHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
+ + YAK +I AR FD + + W+AMI GY +N +EA ++F +M+
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 351 N----IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN 406
+ + P V + + A+ G L + + Y K+ + D+ V +I YAK G+
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 407 VESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
+ A F KDVI ++++I G ++ + E+ L+H MR +G+ P+ T +G+LTA
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 467 CNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSV 526
C+H + G G + ++D+ + G LD A M VS
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS- 477
Query: 527 WGALLSACKIH 537
W +L IH
Sbjct: 478 WNTMLFGFGIH 488
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H H +V G N + L++ + G + A+++FD D+ WN ++ G+
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
L + + ++ M+ GV+PD T +L AC+
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACS 521
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 308/560 (55%), Gaps = 3/560 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H Q+ + L L+ S G + + ++F++ + + W A+I Y+R
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV-FVQN 193
+ + M + G++P+ T VL +C + R VHG +R P+ +
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL 343
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV +YA+CG + V ++DR +V+W S+IS YA G ++AL LF QM +K
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D L S + A + + G+ +HG +I+ DE + SL Y+K G V A + F
Sbjct: 404 DAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVF 462
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+Q+K SV+ WN+M+ G+++NG++ EA+ LF M ++ + VT + A + +GSL+
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLE 522
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+W+ + S D+F +TALIDMYAKCG++ +A VF S + ++ WS+MI YG
Sbjct: 523 KGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYG 581
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
+HG+ AI+ ++ M ++G PN+V F+ +L+AC HSG V EG F+ M+ FG+ P +E
Sbjct: 582 MHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSE 641
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL 553
H++C +DLL R+G L +AY I +M SVWG+L++ C+IH+ + + + L +
Sbjct: 642 HFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDI 701
Query: 554 DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKS 613
+TG+Y LSN+YA W+ +R M+ L K GYS IEI+ K+ F G+++
Sbjct: 702 VTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEEN 761
Query: 614 HPRSDEIYNEIQRLERRLKE 633
++DEIY + L+ E
Sbjct: 762 RIQTDEIYRFLGNLQNLTNE 781
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/478 (27%), Positives = 253/478 (52%), Gaps = 9/478 (1%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSG-LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHP 117
Y L + + R + Q+H L+V+G L+ + +TKL+ + +G +R +F+ F +P
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLV 176
D F++ +I+ +L I++Y + E F FP VL+AC + + V
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
HG++I+ G D ++ L+ MY + GN+ A VFDG+ R +V+W++++S +NGE
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
++ALR+F M + V+ D + ++S+V ++ L RS+HG I + F+ + L SL
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
Y+KCG ++ + F+++ + + W AMIS Y + +E+A+ F EMI I+P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI-FVNTALIDMYAKCGNVESARIVFD 415
VT+ S + +G ++ + + + + E + ++ AL+++YA+CG + V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
S+++++ W+++I Y G +A+ L+ M + P+ T ++AC ++GLV
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 476 GWELF-HCMRGFGIEPRNEHY-SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
G ++ H +R + +E + ++D+ ++G +D A ++ V W ++L
Sbjct: 424 GKQIHGHVIR---TDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSML 477
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/652 (30%), Positives = 338/652 (51%), Gaps = 15/652 (2%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH+ +IV G+ N L T LV+ S + A ++ + DVFLW +++ G+ R+
Sbjct: 246 IHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ + + MR G+ P+ FT+ +L C+ + +H Q I+ GF V N
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 195 LVAMYAKCGNIGM-ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MY KC + A VF + VVSWT++I G +G + L +M +V+
Sbjct: 366 LVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP 425
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ + L ++RA + + + +H +++ + E + SL YA +V A +
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
MK I + ++++ + + G E A+ + M I+ D +++ ASA +G+L+
Sbjct: 486 RSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + Y KS ++ V +L+DMY+KCG++E A+ VF+ + DV+ W+ ++ G
Sbjct: 546 TGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRN 492
+G A++ + MR P+ VTF+ LL+AC++ L G E F M+ + IEP+
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
EHY +V +LGRAG L++A + M ++P ++ LL AC+ +++LGE A K +
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLA 725
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK 612
L P + Y+ L++LY S + R LM EK LSK LG S +E+ GK+ F D
Sbjct: 726 LAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDV 785
Query: 613 SH-PRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLIS 671
+ +++ IY EI+ ++ +K G P+ EN + HS + AV YG I
Sbjct: 786 TRVDKTNGIYAEIESIKEEIKRFG-SPY-----------RGNENASFHSAKQAVVYGFIY 833
Query: 672 TAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSC 723
+P + + KN C +CH + ++++LV+++I VRD N+ H FK+G CSC
Sbjct: 834 ASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 212/446 (47%), Gaps = 4/446 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH +I GL N L L++ I ARKLFDE SH VF W +I +++S
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
F + + ++ M G P+ FTF V+++C L D VHG VI+ GF + V +
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
L +Y+KCG A +F L + +SWT +IS + EAL+ +++M V +
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
V ++ A + LE G+++H II G L SL FY++ ++ A +
Sbjct: 225 EFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
V +W +++SG+ +N A+EAV F EM + ++P++ T + + V SL
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKC--GNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ + K + V AL+DMY KC VE++R VF +V+ W+ +I+G
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGL 402
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
HG + L M + V PN VT G+L AC+ VR E+ + ++
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKM 518
+ +VD + +D A++ I M
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 220/475 (46%), Gaps = 57/475 (12%)
Query: 162 KACTELLDF------RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL 215
K+C +L F R+ +H VI++G ++ + N L+++Y K I AR +FD +
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 216 NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGR 275
+ RTV +WT +IS + ++ E AL LF +M + + S+VR+ + D+ G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 276 SLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNG 335
+HG +IK GFE + SL+ Y+KCGQ A F ++ + I W MIS
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
EA+ + EM+ + P+ T AS+ +G L+ + + + ++ + T
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
+L+D Y++ +E A V + + E+DV +W++++ G+ + + EA+ + MR G+ P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 456 NDVTFIGLLTACN-----------HSGLVREGWE------------LFHC-------MRG 485
N+ T+ +L+ C+ HS ++ G+E C R
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRV 383
Query: 486 FG--IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHV 540
FG + P ++ ++ L G++ + +M+M +EP V +L AC RHV
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHV 443
Query: 541 TLGEYAAKKLFSLDPYNTGHYV--------QLSNLYASSRLWDHVAHVRVLMREK 587
+++ + Y +V L + YASSR D+ +V M+ +
Sbjct: 444 -------RRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 211/472 (44%), Gaps = 53/472 (11%)
Query: 52 GLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYA 107
GL ++F Y++++ + R LD QIH+Q I G + + T + N ++ C A
Sbjct: 320 GLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS----TDVGNALVDMYMKCSA 375
Query: 108 R-----KLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
++F P+V W +I G ++ + M + V+P+ T VL+
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
AC++L R +H ++R ++ V N LV YA + A V + R ++
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNIT 495
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
+TS+++ + + G+ AL + N M +++D ++L + A ++ LE G+ LH +
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 283 KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVD 342
K GF +L SL Y+KCG + A+ F+++ T V+ WN ++SG A NG A+
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 343 LFREMITRNIKPDSVT--VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
F EM + +PDSVT + +A ++ ++ L L EY +
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGL-----------EY----------FQV 654
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
K N+ E V + ++ G G+ EA + M + PN + F
Sbjct: 655 MKKIYNI-----------EPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKPNAMIF 700
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH-YSCVVDLLGRAGYLDQA 511
LL AC + G + G ++ + +G + P + Y + DL +G + A
Sbjct: 701 KTLLRACRYRGNLSLGEDMAN--KGLALAPSDPALYILLADLYDESGKPELA 750
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 297/525 (56%), Gaps = 2/525 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H + +GL + F+ + + + S G+ A F E D+F W +II +RS
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ +M+ M+ +G+ PDG ++ +++ HG VIR+ F D V N
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS 371
Query: 195 LVAMYAKCGNIGMARVVFDGLNDR-TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L++MY K + +A +F +++ +W +++ GY + ++ + LF +++N +++
Sbjct: 372 LLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEI 431
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D + S++ + + + G+SLH ++K + ++ SL Y K G + VA F
Sbjct: 432 DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF 491
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+ T+ VI WNAMI+ Y +E+A+ LF M++ N KP S+T+ + +A GSL+
Sbjct: 492 CEADTN-VITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLE 550
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
Q + Y++++E+ ++ ++ ALIDMYAKCG++E +R +FD ++KD + W+ MI GYG
Sbjct: 551 RGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYG 610
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
+HG AI L+ M ++ V P TF+ LL+AC H+GLV +G +LF M + ++P +
Sbjct: 611 MHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLK 670
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL 553
HYSC+VDLL R+G L++A +M M P +WG LLS+C H +G A++ +
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 554 DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
DP N G+Y+ L+N+Y+++ W+ R +MRE G+ K G+SV+
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/479 (28%), Positives = 241/479 (50%), Gaps = 11/479 (2%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSG-LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF 120
L D S L + HN LI++G L N F+ +KL++ ++ G + ++F + D+F
Sbjct: 33 LCDQSLSLESLRK-HNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIF 91
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
LWN+II+ + + + ++ + M G PD FT P V+ AC ELL F + VHG V
Sbjct: 92 LWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 181 IRY-GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+++ GF + V V Y+KCG + A +VFD + DR VV+WT+IISG+ QNGE+
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 240 LRLFNQMRNTDVKLDWI---ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
L +M + +D L +A ++ L++GR LHG +K G + S+
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
+FY+K G A F ++ + W ++I+ A++G EE+ D+F EM + + PD
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
V + ++ + + +V + ++ D V +L+ MY K + A +F R
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 417 TSEK-DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
SE+ + W+ M+ GYG + I L+ ++ G+ + + ++++C+H G V
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451
Query: 476 GWELFHC-MRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
G L HC + ++ + ++DL G+ G L A+ M + V W A++++
Sbjct: 452 GKSL-HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR--MFCEADTNVITWNAMIAS 507
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/535 (26%), Positives = 239/535 (44%), Gaps = 51/535 (9%)
Query: 84 LKHNGFLITKLVNGS-----SNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNT 138
LKH GF V S S G + A +FDE DV W AII G+ ++
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 139 IEMYGLMRREGVD---PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGL 195
+ M G D P+ T +AC+ L + +HG ++ G FVQ+ +
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 196 VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
+ Y+K GN A + F L D + SWTSII+ A++G+ E+ +F +M+N + D
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
+ + ++ G + + QG++ HG +I+ F + + SL + Y K + VA F +
Sbjct: 332 VVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCR 391
Query: 316 M-KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+ + + WN M+ GY K + ++LFR++ I+ DS + S + + +G++ L
Sbjct: 392 ISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLL 451
Query: 375 AQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGL 434
+ + YV K+ I V +LID+Y K G++ A +F ++ +VI W+AMI Y
Sbjct: 452 GKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVH 510
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
Q +AI L+ M P+ +T + LL AC ++G + G + + E
Sbjct: 511 CEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSL 570
Query: 495 YSCVVDLLGRAGYLDQA----------------------------------YDFIMKMSI 520
+ ++D+ + G+L+++ +D + + +
Sbjct: 571 SAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDV 630
Query: 521 EPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPY----NTGHYVQLSNLYASS 571
+P + ALLSAC H L E K + Y N HY L +L + S
Sbjct: 631 KPTGPTFLALLSACT---HAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRS 682
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 309/601 (51%), Gaps = 26/601 (4%)
Query: 57 SFYASLIDNSTHKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE 113
S YAS++ + L Q+H + S +G + T ++ + ++ A+ LFD
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 114 FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
+ + +NA+I GYS+ + ++ + G+ D + V +AC +
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
++G I+ DV V N + MY KC + A VFD + R VSW +II+ + QN
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQN 461
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
G+ E L LF M + ++ D SI++A L G +H I+K G +
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 294 ISLTAFYAKCGQVIVARS----FFDQMKTSSV----------------IMWNAMISGYAK 333
SL Y+KCG + A FF + S + WN++ISGY
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
+E+A LF M+ I PD T + A + S L + + V K E SD+++
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYI 640
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
+ L+DMY+KCG++ +R++F+++ +D + W+AMI GY HG+G EAI L+ M +
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
PN VTFI +L AC H GL+ +G E F+ M R +G++P+ HYS +VD+LG++G + +A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 513 DFIMKMSIEPGVSVWGALLSACKIHR-HVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASS 571
+ I +M E +W LL C IHR +V + E A L LDP ++ Y LSN+YA +
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 820
Query: 572 RLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRL 631
+W+ V+ +R MR L K+ G S +E+ +L VF VGDK+HPR +EIY E+ + +
Sbjct: 821 GMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEM 880
Query: 632 K 632
K
Sbjct: 881 K 881
Score = 205 bits (522), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 227/469 (48%), Gaps = 32/469 (6%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q H +I+SG + F++ L+ +N A +FD+ DV WN +I GYS+SN
Sbjct: 69 QAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSN 128
Query: 134 -LFR------------------------------NTIEMYGLMRREGVDPDGFTFPYVLK 162
+F+ +IE++ M REG++ DG TF +LK
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
C+ L D L +HG V+R G DV + L+ MYAK + VF G+ ++ VS
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
W++II+G QN AL+ F +M+ + + S++R+ + +L G LH +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 283 KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVD 342
K F + + + YAKC + A+ FD + + +NAMI+GY++ H +A+
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 343 LFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYA 402
LF +++ + D +++ A A V L + KS + D+ V A IDMY
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 403 KCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
KC + A VFD +D + W+A+I + +G+G+E + L+ +M ++ + P++ TF
Sbjct: 429 KCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGS 488
Query: 463 LLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
+L AC G + G E+ + G+ + ++D+ + G +++A
Sbjct: 489 ILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 194/412 (47%), Gaps = 40/412 (9%)
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL- 215
F +V K C + L H +I GF P FV N L+ +Y + A +VFD +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 216 -----------------ND-------------RTVVSWTSIISGYAQNGEALEALRLFNQ 245
ND R VVSW S++SGY QNGE+L+++ +F
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 246 MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
M ++ D I++ ++D G +HG ++++G + + +L YAK +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ + F + + + W+A+I+G +N A+ F+EM N S +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMW 425
A + L+L + + KS++A+D V TA +DMYAKC N++ A+I+FD + + +
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 426 SAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG 485
+AMI GY G++A+ L+H + +G+ ++++ G+ AC + EG +++ G
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY----G 406
Query: 486 FGIEPRNEHYSCV----VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
I+ CV +D+ G+ L +A+ +M VS W A+++A
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAA 457
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 210/693 (30%), Positives = 354/693 (51%), Gaps = 33/693 (4%)
Query: 59 YASLIDNSTHKRHL---DQIHNQLIVSGL--KHNGFLITKLVNGSSNLGHICYARKLFDE 113
YA+L +R+L +H+ ++ N L L+N + G+I YAR++FD
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDT 121
Query: 114 FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
+V W A+I GY ++ + ++ M P+ FT VL +C +
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPG 176
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR---VVFDGLNDRTVVSWTSIISGY 230
VHG ++ G ++V N +++MY +C + A VF+ + + +V+W S+I+ +
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 231 AQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGR------SLHGCIIKM 284
+A+ +F +M + V D L++I + DL LH +K
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 285 GFEDEPDLLISLTAFYAKCGQ--VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVD 342
G + ++ +L Y++ + + F + ++ WN +I+ +A E A+
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIH 355
Query: 343 LFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYA 402
LF ++ + PD T S A A + + + A + V K + +D +N +LI YA
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 403 KCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
KCG+++ VFD +DV+ W++M+ Y LHGQ + ++ M + P+ TFI
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIA 472
Query: 463 LLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
LL+AC+H+G V EG +F M P+ HY+CV+D+L RA +A + I +M ++
Sbjct: 473 LLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD 532
Query: 522 PGVSVWGALLSACKIHRHVTLGEYAAKKLFSL-DPYNTGHYVQLSNLYASSRLWDHVAHV 580
P VW ALL +C+ H + LG+ AA KL L +P N+ Y+Q+SN+Y + ++
Sbjct: 533 PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLS 592
Query: 581 RVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHT 640
M + K+ S EI K+ F G + P + +Y E++RL LKE+G+VP
Sbjct: 593 IKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEM 652
Query: 641 ESV-LHDLNYEEKEENLNIHSERIAVAYGLI-----STAPGTILRITKNLRACVNCHSVI 694
S + E++E+NL HSE++A+A+ ++ S +++I KN R C++CH+ +
Sbjct: 653 RSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFM 712
Query: 695 KLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KL SKL+ +EI++RD+NRFHHFKD CSC DYW
Sbjct: 713 KLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 327/643 (50%), Gaps = 45/643 (6%)
Query: 94 LVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
L+ G + LG A L + DVF W A+I G + + ++M+ M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
V P+ T + AC+ L VH ++ GF DV V N LV MY+KCG + AR
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 407
Query: 210 VVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVD 269
VFD + ++ V +W S+I+GY Q G +A LF +M++ +++ + I +++ Y
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY---- 463
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
IK G E E + L K G+V Q T++ WN +I+
Sbjct: 464 ------------IKNGDEGEA---MDLFQRMEKDGKV--------QRNTAT---WNLIIA 497
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
GY +NG +EA++LFR+M P+SVT+ S A A + K+ + + V + +
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
V AL D YAK G++E +R +F KD+I W+++I GY LHG A+ L++ M+
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 450 QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYL 508
G+ PN T ++ A G V EG ++F+ + + I P EH S +V L GRA L
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 677
Query: 509 DQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLY 568
++A FI +M+I+ +W + L+ C+IH + + +AA+ LFSL+P NT +S +Y
Sbjct: 678 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 737
Query: 569 ASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLE 628
A R+ L K LG S IE+ + F GD+S +D +Y ++++
Sbjct: 738 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS 797
Query: 629 RRLKEIGFVPHTESVLHDLNYEE--KEENLNIHSERIAVAYGLIST--APGTILRITKNL 684
R ++ +L EE +EE IHSE+ A+A+GLIS+ A T +RI KNL
Sbjct: 798 R------LDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNL 851
Query: 685 RACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
R C +CH K +SK +I++ D HHFK+G CSC DYW
Sbjct: 852 RMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 216/450 (48%), Gaps = 35/450 (7%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
F+ TKL++ + G I ARK+FD ++F W+A+I YSR N +R +++ LM ++
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
GV PD F FP +L+ C D ++H VI+ G + V N ++A+YAKCG + A
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 209 RVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDV 268
F + +R V++W S++ Y QNG+ EA+ L +M + + ++ Y
Sbjct: 236 TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN-- 293
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
L C M DL+ + F T+ V W AMI
Sbjct: 294 -------QLGKCDAAM------DLMQKMETFGI----------------TADVFTWTAMI 324
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
SG NG +A+D+FR+M + P++VT+ SA A + + + + K +
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
D+ V +L+DMY+KCG +E AR VFD KDV W++MI GY G +A L+ M
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRM 444
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE-HYSCVVDLLGRAGY 507
+ A + PN +T+ +++ +G E +LF M G RN ++ ++ + G
Sbjct: 445 QDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGK 504
Query: 508 LDQAYDFIMKMSIE---PGVSVWGALLSAC 534
D+A + KM P +LL AC
Sbjct: 505 KDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 226/499 (45%), Gaps = 63/499 (12%)
Query: 156 TFPYVLKACTELLDFRLSCLVHGQVIRYGF--GPDVFVQNGLVAMYAKCGNIGMARVVFD 213
T+ +L++C + L ++H R+G PDVFV+ L++MYAKCG I AR VFD
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 214 GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+ +R + +W+++I Y++ E +LF M V D I++ + D+E
Sbjct: 140 SMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA 199
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
G+ +H +IK+G + S+ A YAKCG++ A FF +M+ VI WN+++ Y +
Sbjct: 200 GKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
NG EEAV+L +EM I P VT Q+G K + A D+
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG-------------KCDAAMDLMQ 306
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
+ A DV W+AMI G +G ++A++++ M AGV
Sbjct: 307 KMETFGITA------------------DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
PN VT + ++AC+ ++ +G E+ G + +VD+ + G L+ A
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 514 FIMKMSIEPGVSVWGALLSA-CKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSR 572
+ V W ++++ C+ Y K Y +Q +NL +
Sbjct: 409 VFDSVK-NKDVYTWNSMITGYCQ-------AGYCGK------AYELFTRMQDANLRPNII 454
Query: 573 LWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQ-------VFHVGDKSHPRSDEIYNEIQ 625
W+ + + ++G + DL + +E +GK+Q + G + + DE
Sbjct: 455 TWNTMISGYIKNGDEGEAMDL-FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL---- 509
Query: 626 RLERRLKEIGFVPHTESVL 644
L R+++ F+P++ ++L
Sbjct: 510 ELFRKMQFSRFMPNSVTIL 528
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 146/317 (46%), Gaps = 8/317 (2%)
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+NG LEA + + + K+ + ++ + D + GR LH + G EPD
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 292 LLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
+ + L + YAKCG + AR FD M+ ++ W+AMI Y++ E LFR M+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
+ PD A G ++ + + V K +S + V+ +++ +YAKCG ++
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNH 469
A F R E+DVI W+++++ Y +G+ EA+ L M + G+ P VT+ L+ N
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 470 SGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSV 526
G +L M FGI ++ ++ L G QA D KM + P
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 527 WGALLSACKIHRHVTLG 543
+ +SAC + + G
Sbjct: 355 IMSAVSACSCLKVINQG 371
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 206/624 (33%), Positives = 329/624 (52%), Gaps = 47/624 (7%)
Query: 51 HGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLV--NGSSNLGHICYAR 108
L L+ L++N + Q+ Q++ L + F +++L+ + + ++ A+
Sbjct: 29 QSLQLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAK 88
Query: 109 KLFDEFS-HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
LF F+ +P+VF++N +I S S +Y M R V PD TF Y++KA + L
Sbjct: 89 LLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFL 146
Query: 168 LDFRLSCLVHGQVIRYG-FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
+ + +H +I G ++ N LV Y + GN G+A VF + V S+ +
Sbjct: 147 SEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVM 203
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
I GYA+ G +LEAL+L+ +M + ++ D ++S++ G + D+ G+ +HG I + G
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 287 EDEPDLLIS--LTAFYAKC-------------------------------GQVIVARSFF 313
+L++S L Y KC G + A++ F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAV-DLFREM-ITRNIKPDSVTVRSAALASAQVGS 371
DQM ++ WN+++ GY+K G + V +LF EM I +KPD VT+ S +A G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L +W+ V + + D F+++ALIDMY KCG +E A +VF +EKDV +W++MI G
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEP 490
HG G +A+ L+ M++ GV PN+VT + +LTAC+HSGLV EG +F+ M+ FG +P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 491 RNEHYSCVVDLLGRAGYLDQAYDFIM-KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
EHY +VDLL RAG +++A D + KM + P S+WG++LSAC+ + E A +
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGY-SVIEINGKLQVFH 608
L L+P G YV LSN+YA+ W + R M +G+ K GY SV+ + G +
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVA 623
Query: 609 VGDKSHPRSDEIYNEIQRLERRLK 632
++HPR EI +Q L +K
Sbjct: 624 AEKQNHPRWTEIKRILQHLYNEMK 647
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/551 (36%), Positives = 295/551 (53%), Gaps = 13/551 (2%)
Query: 57 SFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNG-SSNLGHICYARKLFDEF- 114
S LI + R QI QLI L + +I K+V + Y+ +
Sbjct: 7 SVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIR 66
Query: 115 SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC 174
S F +N ++ Y+ + R TI Y G PD FTFP V KAC + R
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 175 LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG 234
+HG V + GF D++VQN LV Y CG A VF + R VVSWT II+G+ + G
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
Query: 235 EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
EAL F++M DV+ + V ++ + G V L G+ +HG I+K +
Sbjct: 187 LYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN-IK 353
+L Y KC Q+ A F +++ + WN+MISG ++EA+DLF M T + IK
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 354 PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
PD + S A A +G++ +W+ +Y+ + D + TA++DMYAKCG +E+A +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
F+ K+V W+A++ G +HG G E++ + M + G PN VTF+ L AC H+GLV
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 474 REGWELFHCM--RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
EG FH M R + + P+ EHY C++DLL RAG LD+A + + M ++P V + GA+L
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 532 SACKIHRHVTLGEYAAKKLFS---LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
SACK TL E + L S ++ ++G YV LSN++A++R WD VA +R LM+ KG
Sbjct: 484 SACK--NRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKG 541
Query: 589 LSKDLGYSVIE 599
+SK G S IE
Sbjct: 542 ISKVPGSSYIE 552
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 310/592 (52%), Gaps = 17/592 (2%)
Query: 58 FYASLIDNSTHKRHLD-QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH 116
+AS+I N +D IH +V + L++ + G + A KLFDE
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALV--------VWNSLLSLYAKCGKLVDAIKLFDEMPM 118
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGF---TFPYVLKACTELLDFRLS 173
DV N + G+ R+ R T + L++R + GF T VL C ++
Sbjct: 119 RDVISQNIVFYGFLRN---RETESGFVLLKRM-LGSGGFDHATLTIVLSVCDTPEFCLVT 174
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
++H I G+ ++ V N L+ Y KCG R VFDG++ R V++ T++ISG +N
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
+ LRLF+ MR V + + +S + A + +G+ +H + K G E E +
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK 353
+L Y+KCG + A + F+ + ++ G A+NG EEA+ F M+ ++
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 354 PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
D+ V + S SL L + + V K +++ + FVN LI+MY+KCG++ ++ V
Sbjct: 355 IDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTV 414
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
F R +++ + W++MI + HG G A+ LY M V P DVTF+ LL AC+H GL+
Sbjct: 415 FRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474
Query: 474 REGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
+G EL + M+ GIEPR EHY+C++D+LGRAG L +A FI + ++P +W ALL
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLG 534
Query: 533 ACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
AC H +GEYAA++LF P ++ ++ ++N+Y+S W A M+ G++K+
Sbjct: 535 ACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKE 594
Query: 593 LGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVL 644
G S IEI K F V DK HP+++ IY+ + L + + G+ P +L
Sbjct: 595 TGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRFIL 646
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/610 (30%), Positives = 325/610 (53%), Gaps = 40/610 (6%)
Query: 63 IDNSTHKRHLDQIHNQLIV-SGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
+D + R QIH+ ++ S L+ + F+ LV+ +G I A LF D+
Sbjct: 237 MDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
Query: 122 WNAIIRGY-SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
WN +I GY S F+ + L+ + V PD T +L C +L D +H +
Sbjct: 297 WNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Query: 181 IRYGFG-PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+R+ + D V N L++ YA+ G+ A F ++ + ++SW +I+ +A + + +
Sbjct: 357 LRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQF 416
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF---EDEPDLLISL 296
L L + + N + LD + ++S+++ +V + + + +HG +K G E+EP L +L
Sbjct: 417 LNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNAL 476
Query: 297 TAFYAKCGQVIVA--------------------------------RSFFDQMKTSSVIMW 324
YAKCG V A + F +M T+ + W
Sbjct: 477 LDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
+ M+ YA++ EA+ +FRE+ R ++P++VT+ + AQ+ SL L + Y+ +
Sbjct: 537 SLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIR 596
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
DI + L+D+YAKCG+++ A VF + +D++M++AM+ GY +HG+G EA+ +
Sbjct: 597 GGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMI 655
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF-GIEPRNEHYSCVVDLLG 503
Y M ++ + P+ V +LTAC H+GL+++G +++ +R G++P E Y+C VDL+
Sbjct: 656 YSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIA 715
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
R G LD AY F+ +M +EP ++WG LL AC + + LG A L + +TG++V
Sbjct: 716 RGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVL 775
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
+SN+YA+ W+ V +R LM++K + K G S +E++G+ VF GD SHPR D I++
Sbjct: 776 ISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDL 835
Query: 624 IQRLERRLKE 633
+ L ++KE
Sbjct: 836 VNALYLQMKE 845
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 236/522 (45%), Gaps = 60/522 (11%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICY-ARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+H+ +I +GL+ + + LV+ + G I A FD + DV WNAII G+S +N
Sbjct: 144 MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENN 203
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC----LVHGQVI-RYGFGPD 188
+ + + LM +E +P+ T VL C +D ++C +H V+ R
Sbjct: 204 MMADAFRSFCLMLKEPTEPNYATIANVLPVCAS-MDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLF-NQMR 247
VFV N LV+ Y + G I A +F + + +VSW +I+GYA N E +A +LF N +
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF-EDEPDLLISLTAFYAKCGQV 306
DV D + ++SI+ + DL G+ +H I++ + ++ + +L +FYA+ G
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 307 IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
A F M T +I WNA++ +A + + ++L ++ I DSVT+ S
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 367 AQVGSLKLAQWMDDYVSKSEYASD---IFVNTALIDMYAKCGNVE--------------- 408
V + + + Y K+ D + AL+D YAKCGNVE
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 409 -----------------SARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
A+++F S D+ WS M+ Y EAI ++ ++
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR 562
Query: 452 GVCPNDVTFIGLLTACNHSG---LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYL 508
G+ PN VT + LL C LVR+ + +RG + R + ++D+ + G L
Sbjct: 563 GMRPNTVTIMNLLPVCAQLASLHLVRQCHG--YIIRGGLGDIRLK--GTLLDVYAKCGSL 618
Query: 509 DQAY---------DFIMKMSIEPGVSVWGALLSACKIHRHVT 541
AY D +M ++ G +V G A I+ H+T
Sbjct: 619 KHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMT 660
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 16/438 (3%)
Query: 108 RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR-REGVDPDGFTFPYVLKACTE 166
+K+F + D +WN ++ G S S R T+ + M + P TF VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNI-GMARVVFDGLNDRTVVSWTS 225
L D +H +I+ G D V N LV+MYAK G I A FDG+ D+ VVSW +
Sbjct: 135 LGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNA 194
Query: 226 IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD---LEQGRSLHGCII 282
II+G+++N +A R F M + ++ + +++ +D GR +H ++
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 283 KMGF-EDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAV 341
+ + + + SL +FY + G++ A S F +M + ++ WN +I+GYA N +A
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAF 314
Query: 342 DLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY-ASDIFVNTALID 399
LF ++ + ++ PDSVT+ S AQ+ L + + Y+ + Y D V ALI
Sbjct: 315 QLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALIS 374
Query: 400 MYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
YA+ G+ +A F S KD+I W+A++ + + ++ +NL H + + + VT
Sbjct: 375 FYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVT 434
Query: 460 FIGLLTAC-NHSGL--VRE--GWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
+ LL C N G+ V+E G+ + + EP+ + ++D + G ++ A+
Sbjct: 435 ILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKI 492
Query: 515 IMKMSIEPGVSVWGALLS 532
+ +S + + +LLS
Sbjct: 493 FLGLSERRTLVSYNSLLS 510
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 185/407 (45%), Gaps = 12/407 (2%)
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
R ++ + L+ G D F V+KAC + D +HG V + G V
Sbjct: 4 LRQFVQNFRLL--SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD-VKL 253
++ MYAKC + + +F ++ V W +++G + + E +R F M D K
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC-GRETMRFFKAMHFADEPKP 120
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV-ARSF 312
+ ++ + D G+S+H IIK G E + + +L + YAK G + A +
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG-- 370
FD + V+ WNA+I+G+++N +A F M+ +P+ T+ + A +
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 371 -SLKLAQWMDDY-VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ + + + Y V +S + +FV +L+ Y + G +E A +F R KD++ W+ +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 429 IMGYGLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACNHSGLVREGWELF-HCMRGF 486
I GY + + ++A L+H + G V P+ VT I +L C + G E+ + +R
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ + ++ R G AY MS + +S W A+L A
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS-WNAILDA 406
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 297/542 (54%), Gaps = 39/542 (7%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P + ++N +++ + F + ++G +R +G+ PD FT P VLK+ L V
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
HG ++ G D +V N L+ MYA G I + VFD + R VVSW +IS Y NG
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 237 LEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
+A+ +F +M + +++K D +VS + A + +LE G ++ ++ FE + +
Sbjct: 129 EDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNA 187
Query: 296 LTAFYAKCGQVIVARSFFDQMK-------------------------------TSSVIMW 324
L + KCG + AR+ FD M+ V++W
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLW 247
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
AM++GY + +EA++LFR M T I+PD+ + S AQ G+L+ +W+ Y+++
Sbjct: 248 TAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 385 SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ D V TAL+DMYAKCG +E+A VF E+D W+++I G ++G A++L
Sbjct: 308 NRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDL 367
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLG 503
Y+ M GV + +TF+ +LTACNH G V EG ++FH M ++P++EH SC++DLL
Sbjct: 368 YYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLC 427
Query: 504 RAGYLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
RAG LD+A + I KM S E V V+ +LLSA + + +V + E A+KL ++ ++
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA 487
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDK--SHPRSD 618
+ L+++YAS+ W+ V +VR M++ G+ K G S IEI+G F VGD SHP+ D
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 619 EI 620
EI
Sbjct: 548 EI 549
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 172/383 (44%), Gaps = 46/383 (12%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+++H + +GL+ + ++ L+ ++LG I K+FDE DV WN +I Y +
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 133 NLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
F + I ++ M +E + D T L AC+ L + + ++ V+ F V +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG---EAL----------- 237
N LV M+ KCG + AR VFD + D+ V WTS++ GY G EA
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 238 -----------------EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
EAL LF M+ ++ D LVS++ LEQG+ +HG
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
I + + + +L YAKCG + A F ++K W ++I G A NG + A
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 341 VDLFREMITRNIKPDSVTVRSAALASAQVGSL----KLAQWMDD---YVSKSEYASDIFV 393
+DL+ EM ++ D++T + A G + K+ M + KSE+ S
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS---- 420
Query: 394 NTALIDMYAKCGNVESARIVFDR 416
LID+ + G ++ A + D+
Sbjct: 421 --CLIDLLCRAGLLDEAEELIDK 441
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 166/349 (47%), Gaps = 34/349 (9%)
Query: 215 LNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
L +++ + ++ A + L LF ++R + D L ++++ G + + +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
+HG +K G E + + SL YA G++ + FD+M V+ WN +IS Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 335 GHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
G E+A+ +F+ M N+K D T+ S A + + +L++ + + +V +E+ + +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRI 184
Query: 394 NTALIDMYAKC-------------------------------GNVESARIVFDRTSEKDV 422
AL+DM+ KC G ++ AR++F+R+ KDV
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
++W+AM+ GY + EA+ L+ M+ AG+ P++ + LLT C +G + +G +
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 483 MRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
+ + + +VD+ + G ++ A + ++ E + W +L+
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLI 352
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
T +V G + G I AR LF+ DV LW A++ GY + N F +E++ M+ G+
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVV 211
PD F +L C + +HG + D V LV MYAKCG I A V
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 212 FDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDL 271
F + +R SWTS+I G A NG + AL L+ +M N V+LD I V+++ A +
Sbjct: 337 FYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFV 396
Query: 272 EQGRSL-HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
+GR + H + + + + L + G + A D+M+ S
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 313/566 (55%), Gaps = 6/566 (1%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+Q+H +I G + N ++ + LV+ + + A + F E S P+ WNA+I G+ +
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 133 NLFRNTIEMYGLMR-REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ + GLM + V D TF +L + + L VH +V++ G ++ +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLN-DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
N +++ YA CG++ A+ VFDGL + ++SW S+I+G++++ A LF QM+
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAK--CGQVIV 308
V+ D ++ A + G+SLHG +IK G E +L + Y + G +
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A S F+ +K+ +I WN++I+G+A+ G +E+AV F + + IK D + + +
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK-DVIMWSA 427
+ +L+L Q + +KS + S+ FV ++LI MY+KCG +ESAR F + S K + W+A
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-F 486
MI+GY HG G +++L+ M V + VTF +LTAC+H+GL++EG EL + M +
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYA 546
I+PR EHY+ VDLLGRAG +++A + I M + P V L C+ + +
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 547 AKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQV 606
A L ++P + YV LS++Y+ + W+ A V+ +M+E+G+ K G+S IEI +++
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKA 660
Query: 607 FHVGDKSHPRSDEIYNEIQRLERRLK 632
F+ D+S+P +IY I+ L + ++
Sbjct: 661 FNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 212/466 (45%), Gaps = 4/466 (0%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
+ L H I G + ++ ++++ G + YA LFDE D WN +I GY
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+ + ++ M+R G D DG++F +LK + F L VHG VI+ G+ +V
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR-N 248
+V + LV MYAKC + A F +++ VSW ++I+G+ Q + A L M
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK 196
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
V +D ++ D + +H ++K+G + E + ++ + YA CG V
Sbjct: 197 AAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 309 ARSFFDQMKTSS-VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
A+ FD + S +I WN+MI+G++K+ E A +LF +M ++ D T A +
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAK--CGNVESARIVFDRTSEKDVIMW 425
+ + V K ALI MY + G +E A +F+ KD+I W
Sbjct: 317 GEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 426 SAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG 485
+++I G+ G +A+ + +R + + +D F LL +C+ ++ G ++
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 486 FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
G S ++ + + G ++ A ++S + W A++
Sbjct: 437 SGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 2/301 (0%)
Query: 170 FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISG 229
F+ L H I+ G D++V N ++ Y K G +G A ++FD + R VSW ++ISG
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
Y G+ +A LF M+ + +D + +++ V + G +HG +IK G+E
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECN 135
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM-I 348
+ SL YAKC +V A F ++ + + WNA+I+G+ + + A L M +
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM 195
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ D+ T L + + V K +I + A+I YA CG+V
Sbjct: 196 KAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 409 SARIVFDRT-SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
A+ VFD KD+I W++MI G+ H A L+ M++ V + T+ GLL+AC
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
Query: 468 N 468
+
Sbjct: 316 S 316
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 299/577 (51%), Gaps = 80/577 (13%)
Query: 55 LDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSS-NLGHICYARKLFDE 113
L+ F +++I S H HL Q+ + +IVSGL H+ FL KL+ + L ++ YAR +FD
Sbjct: 23 LNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDR 82
Query: 114 FSHPDVFLWNAIIRGYSRSNLFR--NTIEMYGLMRREGVD-PDGFTFPYVLKACTELLDF 170
FS P+ L+ A++ YS S + + LM V P+ F +P VLK+ L
Sbjct: 83 FSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSA 142
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMY-AKCGNIGMARVVFDGLNDRTVVSWTSIISG 229
+ LVH + + GF V VQ L+ Y + +I +AR
Sbjct: 143 FSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLAR-------------------- 182
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
+LF++M +V + W A++S
Sbjct: 183 -----------QLFDEMSERNV-VSWTAMLS----------------------------- 201
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
YA+ G + A + F+ M V WNA+++ +NG EAV LFR MI
Sbjct: 202 ---------GYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMIN 252
Query: 350 R-NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+I+P+ VTV A AQ G+L+LA+ + + + + +SD+FV+ +L+D+Y KCGN+E
Sbjct: 253 EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLE 312
Query: 409 SARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC---PNDVTFIGLLT 465
A VF S+K + W++MI + LHG+ EAI ++ M + + P+ +TFIGLL
Sbjct: 313 EASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 466 ACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGV 524
AC H GLV +G F M FGIEPR EHY C++DLLGRAG D+A + + M ++
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADE 432
Query: 525 SVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLM 584
++WG+LL+ACKIH H+ L E A K L +L+P N G+ ++NLY W+ R ++
Sbjct: 433 AIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMI 492
Query: 585 REKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIY 621
+ + K G+S IEI+ ++ F+ DKSHP ++EIY
Sbjct: 493 KHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIY 529
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 25/351 (7%)
Query: 16 PKVTSFEIPTCLFLKFIKHLCSSSVLNLGHVVSLDHGLNLDSF--------YASLIDNST 67
P+ F P L LK +L S+ L H G +L YAS + + T
Sbjct: 122 PRPNHFIYP--LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHIT 179
Query: 68 HKRHL-DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAII 126
R L D++ + +VS T +++G + G I A LF++ DV WNAI+
Sbjct: 180 LARQLFDEMSERNVVSW--------TAMLSGYARSGDISNAVALFEDMPERDVPSWNAIL 231
Query: 127 RGYSRSNLFRNTIEMYGLMRRE-GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGF 185
+++ LF + ++ M E + P+ T VL AC + +L+ +H R
Sbjct: 232 AACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDL 291
Query: 186 GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQ 245
DVFV N LV +Y KCGN+ A VF + +++ +W S+I+ +A +G + EA+ +F +
Sbjct: 292 SSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEE 351
Query: 246 MRN---TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII-KMGFEDEPDLLISLTAFYA 301
M D+K D I + ++ A + +GR + + G E + L
Sbjct: 352 MMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLG 411
Query: 302 KCGQVIVARSFFDQMKTSS-VIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
+ G+ A MK + +W ++++ +GH + A + ++ N
Sbjct: 412 RAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALN 462
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 295/532 (55%), Gaps = 9/532 (1%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACT 165
ARKLFDE S DV W+ +IR Y +S ++++ M E +PD T VLKACT
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 166 ELLDFRLSCLVHGQVIRYGFG-PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
+ D + VHG IR GF DVFV N L+ MY+K ++ A VFD R +VSW
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
SI++G+ N EAL +F+ M V++D + +VS++R + +S+HG II+
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G+E L SL Y C V A + D M V+ + MISG A G ++EA+ +F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY-VSKSEYASDIFVNTALIDMYAK 403
M R+ P+++TV S A + L+ ++W + +S +DI V T+++D YAK
Sbjct: 418 CHM--RD-TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 404 CGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
CG +E AR FD+ +EK++I W+ +I Y ++G +A+ L+ M+Q G PN VT++
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS--IE 521
L+ACNH GLV++G +F M +P +HYSC+VD+L RAG +D A + I + ++
Sbjct: 535 LSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVK 594
Query: 522 PGVSVWGALLSACKIH-RHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHV 580
G S WGA+LS C+ + + + ++ L+P + Y+ S+ +A+ + W+ VA +
Sbjct: 595 AGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMM 654
Query: 581 RVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLK 632
R L++E+ + GYS++ + F GDK E+ + +Q L R +K
Sbjct: 655 RRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMK 706
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 168/324 (51%), Gaps = 6/324 (1%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
F+ L++ S + A ++FDE + ++ WN+I+ G+ + + +EM+ LM +E
Sbjct: 263 FVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQE 322
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCL-VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM 207
V+ D T +L+ C + + L C +HG +IR G+ + + L+ Y C +
Sbjct: 323 AVEVDEVTVVSLLRVC-KFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
A V D + + VVS +++ISG A G + EA+ +F MR+T + I ++S++ A
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSV 438
Query: 268 VDDLEQGRSLHGCIIKMGFE-DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNA 326
DL + HG I+ ++ + S+ YAKCG + +AR FDQ+ ++I W
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
+IS YA NG ++A+ LF EM + P++VT +A A G +K + + + +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 387 YASDIFVNTALIDMYAKCGNVESA 410
+ + + ++DM ++ G +++A
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTA 582
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 200/456 (43%), Gaps = 58/456 (12%)
Query: 126 IRGYSRSNLFRNTIEMYGLMRREGVD-PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
I+ S S +R + Y ++R GV D F FP V KAC +LS L G
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACA-----KLSWLFQG------ 64
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
N + Y KCG++ FD +N R VSW I+ G G E L F+
Sbjct: 65 --------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
++R + + LV ++ A + G +HG +I+ GF + S+ YA
Sbjct: 117 KLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD-S 173
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI-TRNIKPDSVTVRSAA 363
+ AR FD+M VI W+ +I Y ++ + LF+EM+ +PD VTV S
Sbjct: 174 DSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 364 LASAQVGSLKLAQWMDDYVSKSEY-ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
A + + + + + + + + +D+FV +LIDMY+K +V+SA VFD T+ +++
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 423 IMWSAMIMGYGLHGQGW-EAINLYHAMRQAGVCPNDVTFIGLLTACN-----------HS 470
+ W++++ G+ +H Q + EA+ ++H M Q V ++VT + LL C H
Sbjct: 294 VSWNSILAGF-VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 471 GLVREGWELFHCMRGFGIEPRNE--------------------HYSCVVDLLGRAGYLDQ 510
++R G+E I+ S ++ L AG D+
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYA 546
A M P +LL+AC + + ++A
Sbjct: 413 AISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
T +V+ + G I AR+ FD+ + ++ W II Y+ + L + ++ M+++G
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT 525
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVV 211
P+ T+ L AC + ++ ++ P + + +V M ++ G I A +
Sbjct: 526 PNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVEL 585
Query: 212 FDGLNDRT---VVSWTSIISG 229
L + +W +I+SG
Sbjct: 586 IKNLPEDVKAGASAWGAILSG 606
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/526 (35%), Positives = 285/526 (54%), Gaps = 8/526 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H SGL+ + + L++ S + A LF E WN +I YS+S L
Sbjct: 173 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 232
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
I ++ M + V+ T +L A + L CLV ++ G D+ V
Sbjct: 233 QEEAITVFKNMFEKNVEISPVTIINLLSA--HVSHEPLHCLV----VKCGMVNDISVVTS 286
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
LV Y++CG + A ++ ++V TSI+S YA+ G+ A+ F++ R +K+D
Sbjct: 287 LVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKID 346
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+ALV I+ ++ G SLHG IK G + ++ L Y+K V F+
Sbjct: 347 AVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFE 406
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRSAALASAQVGSLK 373
Q++ + +I WN++ISG ++G A A ++F +M +T + PD++T+ S +Q+ L
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
L + + Y ++ + ++ FV TALIDMYAKCGN A VF W++MI GY
Sbjct: 467 LGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRN 492
L G A++ Y MR+ G+ P+++TF+G+L+ACNH G V EG F M + FGI P
Sbjct: 527 LSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTL 586
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
+HY+ +V LLGRA +A I KM I+P +VWGALLSAC IHR + +GEY A+K+F
Sbjct: 587 QHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFM 646
Query: 553 LDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
LD N G YV +SNLYA+ +WD V VR +M++ G LG S I
Sbjct: 647 LDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/541 (25%), Positives = 253/541 (46%), Gaps = 18/541 (3%)
Query: 60 ASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDV 119
A+ ++ K ++Q+ L SGL ++ T L+N G + A+ LFDE D
Sbjct: 57 ATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDT 116
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQ 179
+WNA+I GYSR+ + +++ +M ++G P T +L C + VHG
Sbjct: 117 VVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGV 176
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+ G D V+N L++ Y+KC +G A V+F + D++ VSW ++I Y+Q+G EA
Sbjct: 177 AAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEA 236
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
+ +F M +V++ + +++++ A+ LH ++K G ++ ++ SL
Sbjct: 237 ITVFKNMFEKNVEISPVTIINLLSAH------VSHEPLHCLVVKCGMVNDISVVTSLVCA 290
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
Y++CG ++ A + K S++ +++S YA+ G + AV F + +K D+V +
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
+ + + + Y KS + V LI MY+K +VE+ +F++ E
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMR-QAGVCPNDVTFIGLLTACNHSGLVREGWE 478
+I W+++I G G+ A ++H M G+ P+ +T LL C+ + G E
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 479 LFHCMRGFGIEP--RNEHYSC--VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
L G+ + NE++ C ++D+ + G QA + + K P + W +++S
Sbjct: 471 L----HGYTLRNNFENENFVCTALIDMYAKCGNEVQA-ESVFKSIKAPCTATWNSMISGY 525
Query: 535 KIH--RHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
+ +H L Y + L P LS + + R +++E G+S
Sbjct: 526 SLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPT 585
Query: 593 L 593
L
Sbjct: 586 L 586
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 206/424 (48%), Gaps = 15/424 (3%)
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSC 174
+ D+ ++++++ + + I ++ + R + P+ FT L+A T + F+L
Sbjct: 10 YRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 175 -LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
V + + G V+V+ L+ +Y K G + A+++FD + +R V W ++I GY++N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
G +A +LF M LV+++ G + QGRS+HG K G E + +
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK 353
+L +FY+KC ++ A F +MK S + WN MI Y+++G EEA+ +F+ M +N++
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 354 PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
VT+ + L SA V + + V K +DI V T+L+ Y++CG + SA +
Sbjct: 250 ISPVTIIN--LLSAHVSH----EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
+ + ++ ++++ Y G A+ + RQ + + V +G+L C S +
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 474 REGWELFHCMRGFGIEPRNEHYSCVVD-LLGRAGYLD--QAYDFIMKMSIEPGVSVWGAL 530
G L G+ I+ + VV+ L+ D + F+ + E + W ++
Sbjct: 364 DIGMSL----HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 531 LSAC 534
+S C
Sbjct: 420 ISGC 423
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 320 bits (820), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 326/607 (53%), Gaps = 50/607 (8%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--EFSHPDVFLWNAIIRGYS 130
Q+H I SGL+ + L+ KLV S + A+ + + E HP WN +I Y
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYI 160
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
R+ F+ ++ +Y M +G+ D FT+P V+KAC LLDF +VHG + +++
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM---- 246
V N L++MY + G + +AR +FD +++R VSW +II+ Y + EA +L ++M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 247 -------------------------------RNTDVKLDWIALVSIVRAYGDVDDLEQGR 275
RN +V++ +A+++ ++A + L+ G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 276 SLHGCIIK-MGFEDEPD-LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
H +I+ F + D + SL Y++C + A F Q++ +S+ WN++ISG+A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV-SKSEYASDIF 392
N +EE L +EM+ P+ +T+ S A+VG+L+ + Y+ + Y +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
+ +L+DMYAK G + +A+ VFD ++D + ++++I GYG G+G A+ + M ++G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQA 511
+ P+ VT + +L+AC+HS LVREG LF M FGI R EHYSC+VDL RAGYLD+A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 512 YDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK-LFSLDPYNTGHYVQLSNLYAS 570
D + EP ++ LL AC IH + +GE+AA K L P + GHY+ L+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDE--IYNEIQRLE 628
+ W + V+ L+ + G+ K ++++E + +L G+ + P +D+ I E E
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVINQEQSSDE 696
Query: 629 RRLKEIG 635
RL E+G
Sbjct: 697 ERLVEVG 703
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 233 NGEALEALRLFNQMRNTDVKLDWI--ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
+G+ EA R F+ +R +++ + S++ ++ G+ LH I G E +
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
L+ L FY+ + A++ + + + WN +I Y +N +E+V +++ M+++
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 351 NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
I+ D T S A A + + + + S + +++V ALI MY + G V+ A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 411 RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
R +FDR SE+D + W+A+I Y + EA L M +GV + VT+ + C +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 471 G 471
G
Sbjct: 299 G 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 320 bits (820), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 326/607 (53%), Gaps = 50/607 (8%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--EFSHPDVFLWNAIIRGYS 130
Q+H I SGL+ + L+ KLV S + A+ + + E HP WN +I Y
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYI 160
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
R+ F+ ++ +Y M +G+ D FT+P V+KAC LLDF +VHG + +++
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM---- 246
V N L++MY + G + +AR +FD +++R VSW +II+ Y + EA +L ++M
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 247 -------------------------------RNTDVKLDWIALVSIVRAYGDVDDLEQGR 275
RN +V++ +A+++ ++A + L+ G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 276 SLHGCIIK-MGFEDEPD-LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
H +I+ F + D + SL Y++C + A F Q++ +S+ WN++ISG+A
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV-SKSEYASDIF 392
N +EE L +EM+ P+ +T+ S A+VG+L+ + Y+ + Y +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
+ +L+DMYAK G + +A+ VFD ++D + ++++I GYG G+G A+ + M ++G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQA 511
+ P+ VT + +L+AC+HS LVREG LF M FGI R EHYSC+VDL RAGYLD+A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 512 YDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK-LFSLDPYNTGHYVQLSNLYAS 570
D + EP ++ LL AC IH + +GE+AA K L P + GHY+ L+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDE--IYNEIQRLE 628
+ W + V+ L+ + G+ K ++++E + +L G+ + P +D+ I E E
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELD----GENNKPMNDDSVINQEQSSDE 696
Query: 629 RRLKEIG 635
RL E+G
Sbjct: 697 ERLVEVG 703
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 233 NGEALEALRLFNQMRNTDVKLDWI--ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
+G+ EA R F+ +R +++ + S++ ++ G+ LH I G E +
Sbjct: 59 HGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
L+ L FY+ + A++ + + + WN +I Y +N +E+V +++ M+++
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 351 NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
I+ D T S A A + + + + S + +++V ALI MY + G V+ A
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 411 RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
R +FDR SE+D + W+A+I Y + EA L M +GV + VT+ + C +
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEA 298
Query: 471 G 471
G
Sbjct: 299 G 299
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 299/562 (53%), Gaps = 44/562 (7%)
Query: 74 QIHNQLIVSGLKH-NGFLITKLVNGSSNLGH--ICYARKLFDEFSHPDVFLWNAIIRGYS 130
Q+H QL+V+ H L+ + ++ + + Y +++ F+ D F W ++R S
Sbjct: 21 QVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSFSWGCLVRFLS 80
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
+ F+ T+++Y M G+ P VL+AC ++ + +H Q ++ G V+
Sbjct: 81 QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY 140
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
VQ GLV +Y++ G I +A+ FD + ++ VSW S++ GY ++GE EA R+F+++ D
Sbjct: 141 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKD 200
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
+ W ++S +Y D+ SL + P L Y C ++ +AR
Sbjct: 201 A-VSWNLIIS---SYAKKGDMGNACSLFSAMPL----KSPASWNILIGGYVNCREMKLAR 252
Query: 311 SFFDQMKTSSVIMWNAMISGYAK-------------------------------NGHAEE 339
++FD M + + W MISGY K NG ++
Sbjct: 253 TYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKD 312
Query: 340 AVDLFREMITRN--IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
A+ LF +M+ RN I+PD +T+ S A++Q+G+ W++ Y+++ D ++T+L
Sbjct: 313 ALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSL 372
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
ID+Y K G+ A +F ++KD + +SAMIMG G++G EA +L+ AM + + PN
Sbjct: 373 IDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNV 432
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
VTF GLL+A +HSGLV+EG++ F+ M+ +EP +HY +VD+LGRAG L++AY+ I
Sbjct: 433 VTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKS 492
Query: 518 MSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHV 577
M ++P VWGALL A +H +V GE A L+ TG+ L+ +Y+S WD
Sbjct: 493 MPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDA 552
Query: 578 AHVRVLMREKGLSKDLGYSVIE 599
VR ++EK L K LG S +E
Sbjct: 553 RTVRDSIKEKKLCKTLGCSWVE 574
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 317 bits (811), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 299/582 (51%), Gaps = 5/582 (0%)
Query: 49 LDHGLNLDSFYASLI----DNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
+DH ++ D+ S++ S++ + + +H + + L + ++ + L++ +G I
Sbjct: 100 VDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
+ ++F E + W AII G + ++ + + M R D +TF LKAC
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 165 TELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT 224
L + +H VI GF + V N L MY +CG + +F+ +++R VVSWT
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
S+I Y + G+ ++A+ F +MRN+ V + S+ A + L G LH ++ +
Sbjct: 280 SLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSL 339
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
G D + S+ Y+ CG ++ A F M+ +I W+ +I GY + G EE F
Sbjct: 340 GLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYF 399
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
M KP + S S + ++ + + + V ++LI+MY+KC
Sbjct: 400 SWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKC 459
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
G+++ A ++F T D++ +AMI GY HG+ EAI+L+ + G P+ VTFI +L
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 465 TACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
TAC HSG + G+ F+ M+ + + P EHY C+VDLL RAG L A I +MS +
Sbjct: 520 TACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 524 VSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVL 583
VW LL ACK + G AA+++ LDP V L+N+Y+S+ + A+VR
Sbjct: 580 DVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
Query: 584 MREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ 625
M+ KG+ K+ G+S I+I + F GD+ HP+S++IYN ++
Sbjct: 640 MKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 194/414 (46%), Gaps = 2/414 (0%)
Query: 100 NLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR--REGVDPDGFTF 157
N G++ AR++FD+ H D+ W +II+ Y +N + ++ MR V PD
Sbjct: 52 NAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVL 111
Query: 158 PYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND 217
VLKAC + + +H ++ V+V + L+ MY + G I + VF +
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
R V+WT+II+G G E L F++M ++ D ++A + ++ G+++
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
H +I GF + SL Y +CG++ F+ M V+ W ++I Y + G
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
+AV+ F +M + P+ T S A A + L + + V + V+ ++
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+ MY+ CGN+ SA ++F +D+I WS +I GY G G E + MRQ+G P D
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
LL+ + ++ G ++ FG+E + S ++++ + G + +A
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/575 (32%), Positives = 300/575 (52%), Gaps = 67/575 (11%)
Query: 85 KHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGL 144
+ +G+ +V+G + G + AR+LF+ DV N+++ GY + + ++
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF-- 178
Query: 145 MRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGN 204
+ D T VLKAC EL + +H Q++ G D + + LV +YAKCG+
Sbjct: 179 -KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGD 237
Query: 205 IGMA-------------------------------RVVFDGLNDRTVVSWTSIISGYAQN 233
+ MA R +FD ++R V+ W S+ISGY N
Sbjct: 238 LRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE---- 289
+EAL LFN+MRN + + D L +++ A + LE G+ +H K G D+
Sbjct: 298 NMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 290 ---------------------------PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI 322
LL S+ Y CG++ A+ F++++ S+I
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
WN+M +G+++NG E ++ F +M ++ D V++ S A A + SL+L + +
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ SD V+++LID+Y KCG VE R VFD + D + W++MI GY +GQG+EAI
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAI 536
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDL 501
+L+ M AG+ P +TF+ +LTACN+ GLV EG +LF M+ G P EH+SC+VDL
Sbjct: 537 DLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDL 596
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHY 561
L RAGY+++A + + +M + S+W ++L C + + +G+ AA+K+ L+P N+ Y
Sbjct: 597 LARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAY 656
Query: 562 VQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
VQLS ++A+S W+ A VR LMRE ++K+ G S
Sbjct: 657 VQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 184/413 (44%), Gaps = 97/413 (23%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGF-GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
+L++C+ L +G +++ GF V V N L+ MY++ G +G+AR +FD + DR
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
SW ++I GY +GE +LR F+ M D W +VS
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERD-GYSWNVVVS------------------ 132
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAE 338
GF AK G++ VAR F+ M V+ N+++ GY NG+AE
Sbjct: 133 ------GF--------------AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 339 EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
EA+ LF+E+ N D++T+ + A A++ +LK + + + D +N++L+
Sbjct: 173 EALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLV 229
Query: 399 DMYAKCGN-------------------------------VESARIVFDRTSEKDVIMWSA 427
++YAKCG+ V +R +FDR S + VI+W++
Sbjct: 230 NVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNS 289
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG 487
MI GY + EA+ L++ MR + T ++ AC G + G ++ HC
Sbjct: 290 MISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQM-HC----- 342
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
++C + G +D D ++ ++ S G+ + ACK+ V
Sbjct: 343 -------HAC------KFGLID---DIVVASTLLDMYSKCGSPMEACKLFSEV 379
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+Q+ + + GL + + + L++ G + + R++FD D WN++I GY+ +
Sbjct: 470 EQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATN 529
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL-LDFRLSCLVHGQVIRYGFGPDVFV 191
I+++ M G+ P TF VL AC L L + +GF PD
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 192 QNGLVAMYAKCGNIGMA-RVVFDGLNDRTVVSWTSIISGYAQNG 234
+ +V + A+ G + A +V + D W+SI+ G NG
Sbjct: 590 FSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 276/525 (52%), Gaps = 49/525 (9%)
Query: 151 DPDGFTFPY--------VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
DPD T VL++C + +H ++IR D FV L+ + +
Sbjct: 18 DPDSNTLRLSRRKTLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTL 74
Query: 203 GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
++ A VF +++ V +T++I G+ +G + + + L+++M + V D + S++
Sbjct: 75 DSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVL 134
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM------ 316
+A DL+ R +H ++K+GF + + + Y K G+++ A+ FD+M
Sbjct: 135 KAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 190
Query: 317 -------------------------KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
K + W AMI G +N +A++LFREM N
Sbjct: 191 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMEN 250
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+ + T A + +G+L+L +W+ +V FV ALI+MY++CG++ AR
Sbjct: 251 VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEAR 310
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSG 471
VF +KDVI ++ MI G +HG EAIN + M G PN VT + LL AC+H G
Sbjct: 311 RVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGG 370
Query: 472 LVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
L+ G E+F+ M R F +EP+ EHY C+VDLLGR G L++AY FI + IEP + G L
Sbjct: 371 LLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Query: 531 LSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLS 590
LSACKIH ++ LGE AK+LF + ++G YV LSNLYASS W +R MR+ G+
Sbjct: 431 LSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Query: 591 KDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLER--RLKE 633
K+ G S IE++ ++ F VGD +HP + IY +Q L R R KE
Sbjct: 491 KEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKE 535
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 208/452 (46%), Gaps = 38/452 (8%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H+ IH ++I + + F++ +L+ S L + YA +F S+P+V+L+ A+I G+
Sbjct: 44 HVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFV 103
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
S + + +Y M V PD + VLKAC D ++ +H QV++ GFG
Sbjct: 104 SSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRS 159
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDR-------------------------------T 219
V ++ +Y K G + A+ +FD + DR
Sbjct: 160 VGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKD 219
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
V WT++I G +N E +AL LF +M+ +V + V ++ A D+ LE GR +H
Sbjct: 220 TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS 279
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
+ E + +L Y++CG + AR F M+ VI +N MISG A +G + E
Sbjct: 280 FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 339
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS-EYASDIFVNTALI 398
A++ FR+M+ R +P+ VT+ + A + G L + + + + + I ++
Sbjct: 340 AINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIV 399
Query: 399 DMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
D+ + G +E A R + + E D IM ++ +HG + + ++ P+
Sbjct: 400 DLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE-NPDS 458
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIE 489
T++ L SG +E E+ MR GIE
Sbjct: 459 GTYVLLSNLYASSGKWKESTEIRESMRDSGIE 490
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 38 SSVLNLGHVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNG 97
+ VL LG S GL + Y + K+ D++ ++ V+ T ++N
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA--------TVMINC 198
Query: 98 SSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTF 157
S G I A +LF + D W A+I G R+ +E++ M+ E V + FT
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 158 PYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND 217
VL AC++L L VH V FV N L+ MY++CG+I AR VF + D
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
+ V+S+ ++ISG A +G ++EA+ F M N + + + LV+++ A
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS----------- 367
Query: 278 HGCIIKMGFE 287
HG ++ +G E
Sbjct: 368 HGGLLDIGLE 377
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 199/580 (34%), Positives = 313/580 (53%), Gaps = 45/580 (7%)
Query: 72 LDQIHNQLIVSGLKHNGFLITKLV--NGSSNLGHIC-YARKLFDEF--------SHPDVF 120
++QIH +LI +G+ N L T++V SS ++ +AR +F E+ D F
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPF 87
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
LWNA+I+ +S R + + LM GV D F+ VLKAC+ L + +HG +
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
+ G D+F+QN L+ +Y KCG +G++R +FD + R VS+ S+I GY + G + A
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 241 RLFN----QMRNTDVKLDWIALVS-----------IVRAYGDV--DDLEQGRSLHGCIIK 283
LF+ +M+N + W +++S + + D+ DL S+ +K
Sbjct: 208 ELFDLMPMEMKNL---ISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 284 MG-FEDEPDLL-----------ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGY 331
G ED L ++ YAK G V A++ FDQM V+ +N+M++GY
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 332 AKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
+N + EA+++F +M + + PD T+ A AQ+G L A M Y+ + ++
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
+ ALIDMY+KCG+++ A +VF+ K + W+AMI G +HG G A ++ + +
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLD 509
+ P+D+TF+G+L AC+HSGLV+EG F MR IEPR +HY C+VD+L R+G ++
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 510 QAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
A + I +M +EP +W L+AC H+ GE AK L YN YV LSN+YA
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
Query: 570 SSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHV 609
S +W V VR +M+E+ + K G S IE++G++ F V
Sbjct: 565 SFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 14/175 (8%)
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA---RSFFDQMKTSSV---- 321
DD+ Q +HG +IK G +L + +A + +A R F + S
Sbjct: 26 DDVNQ---IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGE 82
Query: 322 ----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
+WNA+I ++ +A+ L M+ + D ++ A +++G +K
Sbjct: 83 VEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQ 142
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ ++ K+ SD+F+ LI +Y KCG + +R +FDR ++D + +++MI GY
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 290/535 (54%), Gaps = 9/535 (1%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
+ +IH ++ +GL + F ++KL+ SS L I YA +F+ S+ ++F++N +IRGYS
Sbjct: 43 EVSRIHGYMVKTGLDKDDFAVSKLLAFSSVL-DIRYASSIFEHVSNTNLFMFNTMIRGYS 101
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
S+ ++ +R +G+ D F+F LK+C+ L + +HG +R GF
Sbjct: 102 ISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTD 161
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRT-VVSWTSIISGYAQNGEALEALRLFNQMRNT 249
++N L+ Y CG I AR VFD + V+++++++GY Q + AL LF MR +
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
+V ++ L+S + A D+ DL S H IK+G + + L+ +L Y K G + A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
R FD V+ WN MI YAK G EE V L R+M +KP+S T + A
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS 341
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
+ + + + D + + A D + TAL+DMYAK G +E A +F+R +KDV W+AMI
Sbjct: 342 EAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMI 401
Query: 430 MGYGLHGQGWEAINLYHAMRQAG--VCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGF 486
GYG HG EA+ L++ M + V PN++TF+ +L AC+H GLV EG F M +
Sbjct: 402 SGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAY 461
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYA 546
P+ EHY CVVDLLGRAG L++AY+ I + I + W ALL+AC+++ + LGE
Sbjct: 462 SFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESV 521
Query: 547 AKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEIN 601
+L + + + L+ +A + + + KG K+ GYS IEI
Sbjct: 522 MMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNEL---NKG-RKEAGYSAIEIE 572
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/633 (30%), Positives = 324/633 (51%), Gaps = 79/633 (12%)
Query: 74 QIHNQLIVSG-LKHNGFLITKLVNGSSNLGHICYARKLFDEFSH---PDVFLWNAIIRGY 129
Q+H Q+++S + +G L L++ + LG + AR +F+ S D+ LWN+I++
Sbjct: 74 QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKAN 133
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
L+ N +E+Y MR+ G+ DG+ P +L+AC L F L H QVI+ G ++
Sbjct: 134 VSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENL 193
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
V N L+ +Y K G +G A +F + R +SW +I G++Q + A+++F M+
Sbjct: 194 HVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQRE 253
Query: 250 DVKLD---WIALVSIVRAYGDVDD--------------------------------LEQG 274
+ K D W +++S G +D L
Sbjct: 254 EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIA 313
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
+HG +IK GFE+ +L Y K G+V A F Q++ + WN++I+ +
Sbjct: 314 EKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDA 373
Query: 335 GHAEEAVDLF---------------------------------------REMITRNIKPD 355
G +EA+ LF R+M + +
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
SVT+ A++ +L L + + +V ++ + +I V AL++MYAKCG + +VF+
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFE 493
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
+KD+I W+++I GYG+HG +A++++ M +G P+ + + +L+AC+H+GLV +
Sbjct: 494 AIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEK 553
Query: 476 GWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
G E+F+ M + FG+EP+ EHY+C+VDLLGR G+L +A + + M +EP V V GALL++C
Sbjct: 554 GREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSC 613
Query: 535 KIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLG 594
++H++V + E A +L L+P TG Y+ LSN+Y++ W+ A+VR L ++K L K G
Sbjct: 614 RMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSG 673
Query: 595 YSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRL 627
S IE+ K F G + IY ++ L
Sbjct: 674 SSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDL 706
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 13/228 (5%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH--------PDVFLWNA 124
+ + Q+ G++ LIT V+ G + A LF E +V W +
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDA----GKLDEALSLFSELEEMNHVCNVKANVVTWTS 404
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
+I+G + +++E + M+ V + T +L C EL L +HG VIR
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTS 464
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
++ VQN LV MYAKCG + +VF+ + D+ ++SW SII GY +G A +AL +F+
Sbjct: 465 MSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFD 524
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK-MGFEDEPD 291
+M ++ D IALV+++ A +E+GR + + K G E + +
Sbjct: 525 RMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQE 572
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/604 (31%), Positives = 297/604 (49%), Gaps = 17/604 (2%)
Query: 50 DHGLNLDSF-YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHIC 105
+ L LD F YA + + LD +H ++V+GL FLI L++ S G +
Sbjct: 141 EANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLD 200
Query: 106 YARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
A LFD D WN++I GY R + + M R+G++ + VLKAC
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260
Query: 166 ELLD---FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
L+ +H + G D+ V+ L+ MYAK G++ A +F + + VV+
Sbjct: 261 INLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT 320
Query: 223 WTSIISGYAQNGE-----ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
+ ++ISG+ Q E + EA +LF M+ ++ +++A LE GR +
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI 380
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
H I K F+ + + +L YA G F + W +MI + +N
Sbjct: 381 HALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQL 440
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E A DLFR++ + +I+P+ TV A A +L + + Y KS + V T+
Sbjct: 441 ESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSS 500
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
I MYAK GN+ A VF DV +SAMI HG EA+N++ +M+ G+ PN
Sbjct: 501 ISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQ 560
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIM 516
F+G+L AC H GLV +G + F CM+ + I P +H++C+VDLLGR G L A + I+
Sbjct: 561 QAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLIL 620
Query: 517 KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDH 576
+ W ALLS+C++++ +G+ A++L L+P +G YV L N+Y S +
Sbjct: 621 SSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSS 680
Query: 577 VAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGF 636
VR LMR++G+ K+ S I I + F V D SHP S IY ++ ++ + F
Sbjct: 681 AEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMDN----VDF 736
Query: 637 VPHT 640
V +T
Sbjct: 737 VDYT 740
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 229/444 (51%), Gaps = 17/444 (3%)
Query: 106 YARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
+AR+LFD ++ +N++I GY++ + +E++ R + D FT+ L C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
E D L L+HG V+ G VF+ N L+ MY+KCG + A +FD ++R VSW S
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 226 IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG-DVDD--LEQGRSLHGCII 282
+ISGY + G A E L L +M + L AL S+++A ++++ +E+G ++H
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 283 KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK-----NGHA 337
K+G E + + +L YAK G + A F M + +V+ +NAMISG+ + + +
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
EA LF +M R ++P T A + +L+ + + + K+ + SD F+ +AL
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
I++YA G+ E F TS++D+ W++MI + + Q A +L+ + + + P +
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEE 459
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCV----VDLLGRAGYLDQAYD 513
T +++AC + G ++ +G+ I+ + ++ V + + ++G + A
Sbjct: 460 YTVSLMMSACADFAALSSGEQI----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 514 FIMKMSIEPGVSVWGALLSACKIH 537
+++ P V+ + A++S+ H
Sbjct: 516 VFIEVQ-NPDVATYSAMISSLAQH 538
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 175 LVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG 234
L HG +I+ P +++ N L+ MY KC +G AR +FD + +R ++S+ S+ISGY Q G
Sbjct: 68 LAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMG 127
Query: 235 EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
+A+ LF + R ++KLD + G+ DL+ G LHG ++ G + L+
Sbjct: 128 FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLIN 187
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
L Y+KCG++ A S FD+ + WN++ISGY + G AEE ++L +M +
Sbjct: 188 VLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNL 247
Query: 355 DSV---TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+ +V A + G ++ + Y +K DI V TAL+DMYAK G+++ A
Sbjct: 248 TTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAI 307
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQ-----GWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
+F K+V+ ++AMI G+ + EA L+ M++ G+ P+ TF +L A
Sbjct: 308 KLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKA 367
Query: 467 CNHSGLVREGWEL 479
C+ + + G ++
Sbjct: 368 CSAAKTLEYGRQI 380
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
+N DS + +A+ GS+ L + ++ KS +++ L++MY KC +
Sbjct: 41 KNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGF 100
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNH 469
AR +FDR E+++I ++++I GY G +A+ L+ R+A + + T+ G L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 470 SGLVREGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWG 528
+ G EL H + G+ + + ++D+ + G LDQA + VS W
Sbjct: 161 RCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS-WN 218
Query: 529 ALLS 532
+L+S
Sbjct: 219 SLIS 222
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 186/562 (33%), Positives = 306/562 (54%), Gaps = 24/562 (4%)
Query: 81 VSGLKHNGFLI------------TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRG 128
VSG + +GF++ T LVN + G + A +F S DVF +NA+I G
Sbjct: 77 VSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISG 135
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKA--CTELLDFRLSCLVHGQVIRYGFG 186
+ + + +E Y MR G+ PD +TFP +LK EL D + VHG + GF
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKK---VHGLAFKLGFD 192
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT-VVSWTSIISGYAQNGEALEALRLFNQ 245
D +V +GLV Y+K ++ A+ VFD L DR V W ++++GY+Q +AL +F++
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
Query: 246 MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
MR V + + S++ A+ D++ GRS+HG +K G + + +L Y K
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ A S F+ M + WN+++ + G + + LF M+ I+PD VT+ +
Sbjct: 313 LEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPT 372
Query: 366 SAQVGSLKLAQWMDDYVSKS----EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
++ SL+ + + Y+ S +S+ F++ +L+DMY KCG++ AR+VFD KD
Sbjct: 373 CGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKD 432
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
W+ MI GYG+ G A++++ M +AGV P+++TF+GLL AC+HSG + EG
Sbjct: 433 SASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLA 492
Query: 482 CMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
M + I P ++HY+CV+D+LGRA L++AY+ + I VW ++LS+C++H +
Sbjct: 493 QMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNK 552
Query: 541 TLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
L A K+L L+P + G YV +SN+Y + ++ V VR MR++ + K G S I +
Sbjct: 553 DLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVL 612
Query: 601 NGKLQVFHVGDKSHPRSDEIYN 622
+ F G+++HP I++
Sbjct: 613 KNGVHTFFTGNQTHPEFKSIHD 634
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 9/380 (2%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPD-VFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
L+ C + D+ +HG ++R GF D LV MYAKCG + A +VF G ++R
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
V + ++ISG+ NG L+A+ + +MR + D S+++ D +L + +H
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVH 183
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT-SSVIMWNAMISGYAKNGHA 337
G K+GF+ + + L Y+K V A+ FD++ ++WNA+++GY++
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E+A+ +F +M + T+ S A G + + + K+ SDI V+ AL
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
IDMY K +E A +F+ E+D+ W++++ + G + L+ M +G+ P+
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH----YSCVVDLLGRAGYLDQAYD 513
VT +L C +R+G E+ M G+ R ++ ++D+ + G L A
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 514 FIMKMSIEPGVSVWGALLSA 533
M ++ S W +++
Sbjct: 424 VFDSMRVKDSAS-WNIMING 442
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 289/530 (54%), Gaps = 11/530 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLF---DEFSHPDVFLWNAIIRGYS 130
Q+H + SG + + L++ S G I + ++F D+ ++ N +I +S
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLVHGQVIRYGFGPDV 189
+S I ++ M +EG+ D F+ +L +LD L VHG ++ G D+
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS----VLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
V + L +Y+KCG++ + +F G+ + W S+ISG+ + G EA+ LF++M +
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
D L +++ L +G+ +HG ++ G + DL +L Y+KCG + +A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
R +D++ + +++ISGY+++G ++ LFR+M+ DS + S A+A
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
L + Y++K ++ V ++L+ MY+K G+++ F + + D+I W+A+I
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGI 488
Y HG+ EA+ +Y+ M++ G P+ VTF+G+L+AC+H GLV E + + M + +GI
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGI 785
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAK 548
EP N HY C+VD LGR+G L +A FI M I+P VWG LL+ACKIH V LG+ AAK
Sbjct: 786 EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK 845
Query: 549 KLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
K L+P + G Y+ LSN+ A WD V R LM+ G+ K+ G+S +
Sbjct: 846 KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 212/413 (51%), Gaps = 12/413 (2%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A K+F + +V+ WN II G R+ + +++ M PD +T+ VL AC
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
L R +V +VI+ G DVFV +V +YAKCG++ A VF + + +VVSWT +
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
+SGY ++ +A AL +F +MR++ V+++ + S++ A G + + +H + K GF
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFF---DQMKTSSVIMWNAMISGYAKNGHAEEAVDL 343
+ + +L + Y+K G + ++ F D ++ +++ N MI+ ++++ +A+ L
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 344 FREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAK 403
F M+ ++ D +V S + + L L + + Y KS D+ V ++L +Y+K
Sbjct: 441 FTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 404 CGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
CG++E + +F KD W++MI G+ +G EAI L+ M G P++ T +
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLD---QAYD 513
LT C+ + G E+ GI+ + S +V++ + G L Q YD
Sbjct: 558 LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 220/500 (44%), Gaps = 47/500 (9%)
Query: 84 LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
L + FL L++ SN G + A KLFD PDV N +I GY + LF ++ +
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
M G + + ++ V+ AC+ L S LV I+ G+ V++ L+ +++K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
A VF V W +II+G +N LF++M K D S++
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
A ++ L G+ + +IK G ED + ++ YAKCG + A F ++ SV+
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
W M+SGY K+ A A+++F+EM ++ ++ TV S A + + A + +V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESARIVF---DRTSEKDVIMWSAMIMGYGLHGQGWE 440
KS + D V ALI MY+K G+++ + VF D ++++ + MI + + +
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACN-------------HSGLV-------------- 473
AI L+ M Q G+ ++ + LL+ + SGLV
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYS 496
Query: 474 -----REGWELFHCMRGFGIEPR-NEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGV 524
E ++LF GI + N ++ ++ GYL +A +M P
Sbjct: 497 KCGSLEESYKLFQ-----GIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 525 SVWGALLSACKIHRHVTLGE 544
S A+L+ C H + G+
Sbjct: 552 STLAAVLTVCSSHPSLPRGK 571
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 168/346 (48%), Gaps = 2/346 (0%)
Query: 165 TELLDFRLSCLVHGQVIRYGFGP-DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSW 223
+ L + R + ++ ++R P DVF+ L++ Y+ G++ A +FD + VVS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 224 TSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK 283
+ISGY Q+ E+LR F++M + + I+ S++ A + + IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 284 MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDL 343
MG+ + +L ++K + A F +++V WN +I+G +N + DL
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 344 FREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAK 403
F EM KPDS T S A A + L+ + + V K A D+FV TA++D+YAK
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAK 297
Query: 404 CGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
CG++ A VF R V+ W+ M+ GY + A+ ++ MR +GV N+ T +
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLD 509
++AC +V E ++ + G + + ++ + ++G +D
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 295/584 (50%), Gaps = 43/584 (7%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
+I + + L+ +I + L + L+ + + ++ + A + P+VF+
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV 838
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
+NA+ +G+ + ++E+Y M R+ V P +T+ ++KA + F S H +
Sbjct: 839 YNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH--IW 896
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
++GFG V +Q L+ Y+ G I AR VFD + +R ++WT+++S Y + + A
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANS 956
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA 301
L NQM E+ + C+I Y
Sbjct: 957 LANQMS------------------------EKNEATSNCLING---------------YM 977
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
G + A S F+QM +I W MI GY++N EA+ +F +M+ I PD VT+ +
Sbjct: 978 GLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
A A +G L++ + + Y ++ + D+++ +AL+DMY+KCG++E A +VF +K+
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN 1097
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
+ W+++I G HG EA+ ++ M V PN VTF+ + TAC H+GLV EG ++
Sbjct: 1098 LFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR 1157
Query: 482 CM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
M + I EHY +V L +AG + +A + I M EP +WGALL C+IH+++
Sbjct: 1158 SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNL 1217
Query: 541 TLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDL-GYSVIE 599
+ E A KL L+P N+G+Y L ++YA W VA +R MRE G+ K G S I
Sbjct: 1218 VIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIR 1277
Query: 600 INGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESV 643
I+ + +F DKSH SDE+ + + ++ G+V TE+V
Sbjct: 1278 IDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 306 bits (783), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 283/548 (51%), Gaps = 47/548 (8%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-V 150
+ +V+G +G I AR LFD + +V W A+I GY ++ F + ++ MR+EG V
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 151 DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV 210
+ T + KAC + + +R +HG V R D+F+ N L++MY+K G +G A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
VF + ++ VSW S+I+G Q + EA LF +M D+ + W ++ G++
Sbjct: 332 VFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM-VSWTDMIKGFSGKGEI-- 388
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
+KC ++ F M I W AMIS
Sbjct: 389 ------------------------------SKCVEL------FGMMPEKDNITWTAMISA 412
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
+ NG+ EEA+ F +M+ + + P+S T S A+A + L + V K +D
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
+ V +L+ MY KCGN A +F SE +++ ++ MI GY +G G +A+ L+ +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLD 509
+G PN VTF+ LL+AC H G V GW+ F M+ + IEP +HY+C+VDLLGR+G LD
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 510 QAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
A + I M +P VWG+LLSA K H V L E AAKKL L+P + YV LS LY+
Sbjct: 593 DASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYS 652
Query: 570 ---SSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
+R D + +++ + K + KD G S I + G++ F GD+S +EI ++
Sbjct: 653 IIGKNRDCDRIMNIK---KSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKM 709
Query: 627 LERRLKEI 634
+ + ++ I
Sbjct: 710 IRKEMELI 717
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 177/409 (43%), Gaps = 75/409 (18%)
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
+F N ++ +A+ GN+ A +F +++R++VSW ++IS YA+NG+ +A ++F++M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMP- 108
Query: 249 TDVKLDWIALVSIV--------RAYGDVDDLEQGRSLHGCIIKMGFE-----DEPDLLIS 295
V + A+++ + +AY D+ + ++ + GF DE + L +
Sbjct: 109 VRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 296 LTAF---------------------------------------------YAKCGQVIVAR 310
T Y K G+++ AR
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQV 369
S FD+M +VI W AMI GY K G E+ LF M ++K +S T+ A
Sbjct: 229 SLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDF 288
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMI 429
+ + VS+ D+F+ +L+ MY+K G + A+ VF KD + W+++I
Sbjct: 289 VRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLI 348
Query: 430 MGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIE 489
G Q EA L+ M + V++ ++ + G E+ C+ FG+
Sbjct: 349 TGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKG------EISKCVELFGMM 398
Query: 490 PRNEH--YSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSA 533
P ++ ++ ++ GY ++A + KM + P + ++LSA
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 184/466 (39%), Gaps = 117/466 (25%)
Query: 188 DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM- 246
D N L++ Y + G A VF G+ + VVS +S++ GY + G ++A LF++M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 247 -RNT------------------------------DVKLDWIALVSIVRAYGDVDDLEQGR 275
RN DVK++ L + +A D +G
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 276 SLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNG 335
+HG + +M E + L SL + Y+K G + A++ F MK + WN++I+G +
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
EA +LF +M ++ + W D
Sbjct: 356 QISEAYELFEKMPGKD----------------------MVSWTD---------------- 377
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
+I ++ G + +F EKD I W+AMI + +G EA+ +H M Q VCP
Sbjct: 378 -MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP 436
Query: 456 NDVTFIGLLTACN-----------HSGLVR------------------------EGWELF 480
N TF +L+A H +V+ + +++F
Sbjct: 437 NSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIF 496
Query: 481 HCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSACKIH 537
C+ EP Y+ ++ G+ +A + + EP + ALLSAC
Sbjct: 497 SCIS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 538 RHVTLG-EY--AAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHV 580
+V LG +Y + K ++++P HY + +L S L D +++
Sbjct: 553 GYVDLGWKYFKSMKSSYNIEP-GPDHYACMVDLLGRSGLLDDASNL 597
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
QIH +++ + ++ + LV+ G+ A K+F S P++ +N +I GYS +
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKAC 164
+ ++++ ++ G +P+G TF +L AC
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/563 (31%), Positives = 308/563 (54%), Gaps = 8/563 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+++Q+I G N + T ++ S+ G + AR++FD ++ D WN +I G +++
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ + + M GVDP FT+ VL C++L + L L+H ++I D+ + N
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM-RNTDVKL 253
L+ MY CG++ A VF +++ +VSW SIISG ++NG +A+ ++ ++ R + +
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D + + A + + G+ LHG + K+G+E + +L + Y K + A+ F
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
D MK V++W MI G+++ G++E AV F EM + D ++ S A + + L+
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ ++ + + V AL+DMY K G E+A +F S D+ W++M+ Y
Sbjct: 521 QGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYS 580
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
HG +A++ + + + G P+ VT++ LL AC+H G +G L++ M+ GI+ +
Sbjct: 581 QHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPG---VSVWGALLSACKIHRHVTLGEYAAKKL 550
HYSC+V+L+ +AG +D+A + I + PG +W LLSAC R++ +G YAA+++
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQS--PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQI 698
Query: 551 FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI-NGKLQVFHV 609
LDP +T ++ LSNLYA + W+ VA +R +R SKD G S IE+ N QVF
Sbjct: 699 LKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSS 758
Query: 610 GDKSHPR-SDEIYNEIQRLERRL 631
GD+S+P + +E+ RL+R +
Sbjct: 759 GDQSNPEVVSQAQDELNRLKRNM 781
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 233/473 (49%), Gaps = 8/473 (1%)
Query: 74 QIHNQLIVSGL---KHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
QIH ++ +G + + L++ G + ARK+FD+ H +V +NA+ YS
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 131 RSNLFRN-TIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
R+ F + + M E V P+ TF +++ C L D + ++ Q+I+ G+ +V
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
VQ ++ MY+ CG++ AR +FD +N+R V+W ++I G +N + + L F M +
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
V ++ + G+ +H II + L +L Y CG + A
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 310 RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI-KPDSVTVRSAALASAQ 368
F ++ +++ WN++ISG ++NG E+A+ ++R ++ + +PD T +A A+A+
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
+ + V+K Y +FV T L+ MY K ESA+ VFD E+DV++W+ M
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFG 487
I+G+ G A+ + M + + + ++ AC+ ++R+G E+FHC+ G
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTG 533
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
+ +VD+ G+ G + A + I ++ P + W ++L A H V
Sbjct: 534 FDCVMSVCGALVDMYGKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMV 585
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 5/310 (1%)
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDV---FVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
+ C + + + +H V+ G G + N L++MY +CG++ AR VFD + R
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR 161
Query: 219 TVVSWTSIISGYAQNGE-ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
VVS+ ++ S Y++N + A A L M VK + S+V+ ++D+ G SL
Sbjct: 162 NVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSL 221
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHA 337
+ IIK+G+ D + S+ Y+ CG + AR FD + + WN MI G KN
Sbjct: 222 NSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E+ + FR M+ + P T +++GS L + + + S+ +D+ ++ AL
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNAL 341
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA-MRQAGVCPN 456
+DMY CG++ A VF R +++ W+++I G +G G +A+ +Y +R + P+
Sbjct: 342 LDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 457 DVTFIGLLTA 466
+ TF ++A
Sbjct: 402 EYTFSAAISA 411
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 19/359 (5%)
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSW--TSIISGYAQNGEAL--EALRLFNQ 245
+ N L++MY +C ++ AR VFD + R +V+ S + Y G +L + ++L +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 246 MRNTDVKLDWIA--LVSIVRAYGDVDDLEQGRSLHGCIIKMG---FEDEPDLLISLTAFY 300
+ L+ IA +V + R + L++ R +H ++ G + P +L + Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH-AEEAVDLFREMITRNIKPDSVTV 359
+CG + AR FD+M +V+ +NA+ S Y++N A A L M +KP+S T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
S A + + + ++ + K Y+ ++ V T+++ MY+ CG++ESAR +FD +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+D + W+ MI+G + + + + + M +GV P T+ +L C+ G G +L
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG-KL 321
Query: 480 FHCM----RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
H P + + ++D+ G + +A+ ++ P + W +++S C
Sbjct: 322 IHARIIVSDSLADLPLD---NALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGC 376
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 294/555 (52%), Gaps = 43/555 (7%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q H IV+G++ + L T L+N +G I YA +FD DV WN II GY +
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L + I M LMR E + D T ++ A + +L V IR+ F D+ + +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
++ MYAKCG+I A+ VFD ++ ++ W ++++ YA++G + EALRLF M+ V
Sbjct: 415 TVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP 474
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ I I+ +SL + GQV A+ F
Sbjct: 475 NVITWNLII-------------------------------LSLL----RNGQVDEAKDMF 499
Query: 314 DQMKTSSVI----MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
QM++S +I W M++G +NG +EEA+ R+M ++P++ ++ A A A +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 370 GSLKLAQWMDDYVSKS-EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
SL + + + Y+ ++ +++S + + T+L+DMYAKCG++ A VF ++ + +AM
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAM 619
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF-HCMRGFG 487
I Y L+G EAI LY ++ G+ P+++T +L+ACNH+G + + E+F +
Sbjct: 620 ISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRS 679
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAA 547
++P EHY +VDLL AG ++A I +M +P + +L+++C R L +Y +
Sbjct: 680 MKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLS 739
Query: 548 KKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGK--LQ 605
+KL +P N+G+YV +SN YA WD V +R +M+ KGL K G S I+I G+ +
Sbjct: 740 RKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVH 799
Query: 606 VFHVGDKSHPRSDEI 620
VF DK+H R +EI
Sbjct: 800 VFVANDKTHTRINEI 814
Score = 253 bits (645), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 252/485 (51%), Gaps = 8/485 (1%)
Query: 58 FYASLIDNSTHKRHLD---QIHNQLIVSG--LKHNGFLITKLVNGSSNLGHICYARKLFD 112
Y ++ ++R L QIH +++ +G N ++ TKLV + + A LF
Sbjct: 72 IYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFS 131
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL 172
+ +VF W AII R L + + M + PD F P V KAC L R
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQ 232
VHG V++ G VFV + L MY KCG + A VFD + DR V+W +++ GY Q
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
NG+ EA+RLF+ MR V+ + + + + A ++ +E+G+ H I G E + L
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
SL FY K G + A FD+M V+ WN +ISGY + G E+A+ + + M +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARI 412
K D VT+ + A+A+ +LKL + + Y + + SDI + + ++DMYAKCG++ A+
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 413 VFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGL 472
VFD T EKD+I+W+ ++ Y G EA+ L++ M+ GV PN +T+ ++ + +G
Sbjct: 432 VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQ 491
Query: 473 VREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGA 529
V E ++F M+ GI P ++ +++ + + G ++A F+ KM + P
Sbjct: 492 VDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 530 LLSAC 534
LSAC
Sbjct: 552 ALSAC 556
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 150/309 (48%), Gaps = 3/309 (0%)
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG- 285
+S +NGE EAL L +M ++++ I++ DL G+ +H I+K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 286 -FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLF 344
+ + L FYAKC + +A F +++ +V W A+I + G E A+ F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
EM+ I PD+ V + A + + + + YV KS +FV ++L DMY KC
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
G ++ A VFD +++ + W+A+++GY +G+ EAI L+ MR+ GV P VT L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 465 TACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGV 524
+A + G V EG + G+E N + +++ + G ++ A + + E V
Sbjct: 282 SASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA-EMVFDRMFEKDV 340
Query: 525 SVWGALLSA 533
W ++S
Sbjct: 341 VTWNLIISG 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 3/220 (1%)
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+Q + S + +S KNG +EA+ L EM RN++ L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 374 LAQWMDDYVSKSE--YASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
+ + + K+ YA + ++ T L+ YAKC +E A ++F + ++V W+A+I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
G A+ + M + + P++ + AC R G + + G+E
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDC 207
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
S + D+ G+ G LD A ++ V+ W AL+
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA-WNALM 246
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/538 (31%), Positives = 274/538 (50%), Gaps = 44/538 (8%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGH---ICYARKLFDEFSHP 117
S + + + Q H ++ +GL H+ F +KLV ++ + YA + + P
Sbjct: 44 SFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSP 103
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
+ F N++IR Y+ S+ + ++ M V PD ++F +VLKAC F +H
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEAL 237
G I+ G DVFV+N LV +Y + G +AR V D + R VSW S++S Y + G
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
EA LF++M +V+ W ++S
Sbjct: 224 EARALFDEMEERNVE-SWNFMIS------------------------------------- 245
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI-KPDS 356
YA G V A+ FD M V+ WNAM++ YA G E +++F +M+ + KPD
Sbjct: 246 -GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG 304
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ S A A +GSL +W+ Y+ K + F+ TAL+DMY+KCG ++ A VF
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
TS++DV W+++I +HG G +A+ ++ M G PN +TFIG+L+ACNH G++ +
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQA 424
Query: 477 WELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACK 535
+LF M + +EP EHY C+VDLLGR G +++A + + ++ + + +LL ACK
Sbjct: 425 RKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACK 484
Query: 536 IHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDL 593
+ E A +L L+ ++ Y Q+SNLYAS W+ V R MR + +++ L
Sbjct: 485 RFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSL 542
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 270/548 (49%), Gaps = 72/548 (13%)
Query: 146 RREGVDPDGFTFPY-----VLKACTELLDFRLSCLVHGQVIRYGFG-PDVFVQNGLVAMY 199
R E + G P+ +L+ C + + +H + GF P+ + N L+ MY
Sbjct: 33 RLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMY 92
Query: 200 AKCGNI----------------------------GM---ARVVFDGLNDRTVVSWTSIIS 228
KCG GM ARVVFD + +R VVSW +++
Sbjct: 93 MKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVI 152
Query: 229 GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
GYAQ+G EAL + + R + +K + + ++ A L+ R HG ++ GF
Sbjct: 153 GYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLS 212
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAE---------- 338
L S+ YAKCGQ+ A+ FD+M + +W +ISGYAK G E
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 339 ---------------------EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
A+DLFR+MI +KP+ T S ASA + SL+ +
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK-DVIMWSAMIMGYGLHG 436
+ Y+ ++ + V ++LIDMY+K G++E++ VF +K D + W+ MI HG
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Query: 437 QGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHY 495
G +A+ + M + V PN T + +L AC+HSGLV EG F M GI P EHY
Sbjct: 393 LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 496 SCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDP 555
+C++DLLGRAG + I +M EP +W A+L C+IH + LG+ AA +L LDP
Sbjct: 453 ACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDP 512
Query: 556 YNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKS-- 613
++ Y+ LS++YA W+ V +R +M+++ ++K+ S IEI K++ F V D S
Sbjct: 513 ESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHA 572
Query: 614 HPRSDEIY 621
H R +EIY
Sbjct: 573 HARKEEIY 580
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 165/377 (43%), Gaps = 34/377 (9%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
+V+G G + AR +FD DV WN ++ GY++ + Y RR G+ +
Sbjct: 119 MVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
F+F +L AC + +L+ HGQV+ GF +V + ++ YAKCG + A+ FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 214 GLNDRTVVSWTSIISGYAQNG--EALE-----------------------------ALRL 242
+ + + WT++ISGYA+ G EA E AL L
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 243 FNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAK 302
F +M VK + S + A + L G+ +HG +I+ ++ SL Y+K
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 303 CGQVIVARSFFDQMKTS-SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
G + + F + WN MIS A++G +A+ + +MI ++P+ T+
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 362 AALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSE 419
A + G ++ +W + + D LID+ + G E R + + E
Sbjct: 419 ILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Query: 420 KDVIMWSAMIMGYGLHG 436
D +W+A++ +HG
Sbjct: 479 PDKHIWNAILGVCRIHG 495
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 167/410 (40%), Gaps = 73/410 (17%)
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
R + S +S +A E +A+ + ++L + L S+++ GD L+QG+ +
Sbjct: 9 RPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWI 68
Query: 278 HGCIIKMGFEDEPDLLIS--LTAFYAKCGQ------------------------------ 305
H + GF+ P+ L+S L Y KCG+
Sbjct: 69 HRHLKITGFK-RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 306 -VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
++ AR FD M V+ WN M+ GYA++G+ EA+ ++E IK + +
Sbjct: 128 MLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV-- 422
A + L+L + V + + S++ ++ ++ID YAKCG +ESA+ FD + KD+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 423 -----------------------------IMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
+ W+A+I GY G G A++L+ M GV
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
P TF L A +R G E+ M + P S ++D+ ++G L+ +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASER 367
Query: 514 FIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKL-----FSLDPYNT 558
+ W ++SA H LG A + L F + P T
Sbjct: 368 VFRICDDKHDCVFWNTMISALAQH---GLGHKALRMLDDMIKFRVQPNRT 414
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
T L++G + LG + A KLF E + W A+I GY R ++++ M GV
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK 308
Query: 152 PDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVV 211
P+ FTF L A + R +HG +IR P+ V + L+ MY+K G++ + V
Sbjct: 309 PEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERV 368
Query: 212 FDGLNDR-TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
F +D+ V W ++IS AQ+G +ALR+ + M V+ + LV I+ A
Sbjct: 369 FRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGL 428
Query: 271 LEQG 274
+E+G
Sbjct: 429 VEEG 432
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 275/508 (54%), Gaps = 47/508 (9%)
Query: 132 SNLFRNTIE---------MYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLVHGQVI 181
SNL +N I +YG +RR GV G+ P +L+AC ++ L L+H + I
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESI 73
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
++G DV V + L++MY KCG + AR VFD + +R V +W ++I GY NG+A+ A
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL-----------HGCIIKMG----- 285
LF ++ + WI ++ + YG ++E+ R L + +G
Sbjct: 134 LFEEISVCRNTVTWIEMI---KGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN 190
Query: 286 ---------FEDEPD----LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
FED P+ + + + Y + G V AR+ F ++ +++WN +I+GYA
Sbjct: 191 RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA 250
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
+NG++++A+D F M +PD+VTV S A AQ G L + + + ++ + F
Sbjct: 251 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF 310
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
V+ ALIDMYAKCG++E+A VF+ S + V ++MI +HG+G EA+ ++ M
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD 370
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
+ P+++TFI +LTAC H G + EG ++F M+ ++P +H+ C++ LLGR+G L +AY
Sbjct: 371 LKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAY 430
Query: 513 DFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS----LDPYNTGHYVQLSNLY 568
+ +M ++P +V GALL ACK+H + E K + + + Y+ H +SNLY
Sbjct: 431 RLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLY 490
Query: 569 ASSRLWDHVAHVRVLMREKGLSKDLGYS 596
A + W +RV M ++GL K G S
Sbjct: 491 AHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 188/411 (45%), Gaps = 29/411 (7%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR--- 131
+H++ I G+ + + + L++ G + ARK+FDE +V WNA+I GY
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 132 ----SNLF------RNT---IEMY-GLMRREGVDPDGFTF---PYVLKACTELLDFRLSC 174
S LF RNT IEM G +R ++ F P+ LK + L
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKN-VKAWSVMLGV 186
Query: 175 LVHGQVIRYG--FGPDV-----FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
V+ + + F D+ FV + +++ Y + G++ AR +F + R +V W ++I
Sbjct: 187 YVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLI 246
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+GYAQNG + +A+ F M+ + D + + SI+ A L+ GR +H I G E
Sbjct: 247 AGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIE 306
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
+ +L YAKCG + A S F+ + SV N+MIS A +G +EA+++F M
Sbjct: 307 LNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTM 366
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV 407
+ ++KPD +T + A G L + + + ++ LI + + G +
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Query: 408 ESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+ A R+V + + + + A++ +H A + + AG N
Sbjct: 427 KEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNS 477
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 298/550 (54%), Gaps = 13/550 (2%)
Query: 58 FYASLIDNSTHKR---HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGH-ICYARKLFDE 113
YASL+ H Q H ++ SGL+ + + L++ LG + R++FD
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 114 FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
D W +++ GY +E++ M G+D + FT +KAC+EL + RL
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
HG VI +GF + F+ + L +Y AR VFD + + V+ WT+++S +++N
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 234 GEALEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
EAL LF M R + D +++ A G++ L+QG+ +HG +I G +
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
SL Y KCG V AR F+ M + + W+A++ GY +NG E+A+++FREM +++
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 362
Query: 353 KPDSVTVRS-AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+++ A LA+ ++G + YV + + ++ V +ALID+Y K G ++SA
Sbjct: 363 YCFGTVLKACAGLAAVRLGK----EIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSAS 417
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSG 471
V+ + S +++I W+AM+ +G+G EA++ ++ M + G+ P+ ++FI +LTAC H+G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 472 LVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
+V EG F M + +GI+P EHYSC++DLLGRAG ++A + + + S+WG L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 531 LSACKIHRHVT-LGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGL 589
L C + + + E AK++ L+P YV LSN+Y + ++R LM +G+
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 590 SKDLGYSVIE 599
+K +G S I+
Sbjct: 598 AKTVGQSWID 607
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 149/309 (48%), Gaps = 4/309 (1%)
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
G+ EA+R+ N ++++ S+++ V G H ++K G E + ++
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 294 ISLTAFYAKCGQVI-VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
SL + Y K G + R FD I W +M+SGY +A+++F EM++ +
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARI 412
+ T+ SA A +++G ++L + V + + F+++ L +Y AR
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 413 VFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSG 471
VFD E DVI W+A++ + + EA+ L++AM R G+ P+ TF +LTAC +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 472 LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
+++G E+ + GI S ++D+ G+ G + +A MS + VS W ALL
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVS-WSALL 338
Query: 532 SA-CKIHRH 539
C+ H
Sbjct: 339 GGYCQNGEH 347
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 277/523 (52%), Gaps = 35/523 (6%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y LI+ + R + +H L+ SG+ + KLV G + ARK+FDE
Sbjct: 19 YVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMP 78
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
D+ +I +R+ ++ +++ + M ++G+ D F P +LKA LLD +
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H V+++ + D F+ + L+ MY+K G +G AR VF L ++ +V + ++ISGYA N +
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
A EAL L M+ +K D I +++ + + + E+ + + G++ PD
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYK--PD---- 252
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
V+ W ++ISG N E+A D F++M+T + P+
Sbjct: 253 -------------------------VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPN 287
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
S T+ + A + +K + + Y + FV +AL+DMY KCG + A I+F
Sbjct: 288 SATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFR 347
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
+T +K + +++MI Y HG +A+ L+ M G + +TF +LTAC+H+GL
Sbjct: 348 KTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDL 407
Query: 476 GWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSAC 534
G LF M+ + I PR EHY+C+VDLLGRAG L +AY+ I M +EP + VWGALL+AC
Sbjct: 408 GQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAAC 467
Query: 535 KIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHV 577
+ H ++ L AAK L L+P N+G+ + L++LYA++ W+ V
Sbjct: 468 RNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESV 510
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 245/457 (53%), Gaps = 23/457 (5%)
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
Q L M G I A VF + ++ VV WTS+I+GY N + + A R F+ D+
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDI 90
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP--DLLISLTAF--YAKCGQVI 307
L W ++S Y ++ ++ + RSL F+ P D++ T YA G +
Sbjct: 91 VL-WNTMIS---GYIEMGNMLEARSL--------FDQMPCRDVMSWNTVLEGYANIGDME 138
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALAS 366
FD M +V WN +I GYA+NG E + F+ M+ ++ P+ T+ A
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 367 AQVGSLKLAQWMDDYVSKSEYAS-DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMW 425
A++G+ +W+ Y Y D+ V ALIDMY KCG +E A VF +D+I W
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 426 SAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-R 484
+ MI G HG G EA+NL+H M+ +G+ P+ VTF+G+L AC H GLV +G F+ M
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 485 GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGE 544
F I P EH CVVDLL RAG+L QA +FI KM ++ +W LL A K+++ V +GE
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 545 YAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKL 604
A ++L L+P N ++V LSN+Y + +D A ++V MR+ G K+ G S IE + L
Sbjct: 379 VALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGL 438
Query: 605 QVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTE 641
F+ + HPR++ E+QR+ R LK + E
Sbjct: 439 VKFYSSGEKHPRTE----ELQRILRELKSFNILRDEE 471
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 134/267 (50%), Gaps = 11/267 (4%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDP 152
++ G +N+G + ++FD+ +VF WN +I+GY+++ + + M EG V P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 153 DGFTFPYVLKACTELLDFRLSCLVH--GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV 210
+ T VL AC +L F VH G+ + Y DV V+N L+ MY KCG I +A
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN-KVDVNVKNALIDMYGKCGAIEIAME 245
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
VF G+ R ++SW ++I+G A +G EAL LF++M+N+ + D + V ++ A +
Sbjct: 246 VFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGL 305
Query: 271 LEQGRSLHGCIIKMGFEDEPDL--LISLTAFYAKCGQVIVARSFFDQMKTSS-VIMWNAM 327
+E G + + F P++ + ++ G + A F ++M + ++W +
Sbjct: 306 VEDGLAYFNSMFT-DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATL 364
Query: 328 ISG---YAKNGHAEEAVDLFREMITRN 351
+ Y K E A++ ++ RN
Sbjct: 365 LGASKVYKKVDIGEVALEELIKLEPRN 391
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 155/357 (43%), Gaps = 43/357 (12%)
Query: 77 NQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFR 136
N++ ++ N L T ++NG + AR+ FD D+ LWN +I GY
Sbjct: 48 NKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY------- 100
Query: 137 NTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLV 196
IEM ++ L D ++ C DV N ++
Sbjct: 101 --IEMGNMLE-----------------ARSLFD-QMPC------------RDVMSWNTVL 128
Query: 197 AMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWI 256
YA G++ VFD + +R V SW +I GYAQNG E L F +M + +
Sbjct: 129 EGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND 188
Query: 257 ALVSIV-RAYGDVDDLEQGRSLHGCIIKMGFED-EPDLLISLTAFYAKCGQVIVARSFFD 314
A +++V A + + G+ +H +G+ + ++ +L Y KCG + +A F
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKL 374
+K +I WN MI+G A +GH EA++LF EM I PD VT A +G ++
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVED 308
Query: 375 A-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK-DVIMWSAMI 429
+ + + +I ++D+ ++ G + A ++ K D ++W+ ++
Sbjct: 309 GLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 266/482 (55%), Gaps = 35/482 (7%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMY-AKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG 234
+H +I+ G D + ++A A ++ A +VF +N + W +II G++++
Sbjct: 44 IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSS 103
Query: 235 EALEALRLFNQM--RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP-- 290
A+ +F M + VK + S+ +AYG + GR LHG +IK G ED+
Sbjct: 104 FPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFI 163
Query: 291 ------------------DLLISLTAF-----------YAKCGQVIVARSFFDQMKTSSV 321
+ + + F +AKCG + A++ FD+M +
Sbjct: 164 RNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG 223
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+ WN+MISG+ +NG ++A+D+FREM +++KPD T+ S A A +G+ + +W+ +Y
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
+ ++ + + V TALIDMY KCG +E VF+ +K + W++MI+G +G A
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVD 500
++L+ + ++G+ P+ V+FIG+LTAC HSG V E F M+ + IEP +HY+ +V+
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 501 LLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
+LG AG L++A I M +E +W +LLSAC+ +V + + AAK L LDP T
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
YV LSN YAS L++ R+LM+E+ + K++G S IE++ ++ F +HP+S EI
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Query: 621 YN 622
Y+
Sbjct: 524 YS 525
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 198/417 (47%), Gaps = 55/417 (13%)
Query: 59 YASLIDNS-THKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHIC-------YARKL 110
Y LID + R L QIH LI +GL I+ V S L C YA +
Sbjct: 27 YLRLIDTQCSTMRELKQIHASLIKTGL------ISDTVTASRVLAFCCASPSDMNYAYLV 80
Query: 111 FDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMY--GLMRREGVDPDGFTFPYVLKACTELL 168
F +H + F+WN IIRG+SRS+ I ++ L V P T+P V KA L
Sbjct: 81 FTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Query: 169 DFRLSCLVHGQVIRYGFGPDVFVQNGLVAMY----------------------------- 199
R +HG VI+ G D F++N ++ MY
Sbjct: 141 QARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIM 200
Query: 200 --AKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIA 257
AKCG I A+ +FD + R VSW S+ISG+ +NG +AL +F +M+ DVK D
Sbjct: 201 GFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 258 LVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK 317
+VS++ A + EQGR +H I++ FE ++ +L Y KCG + + F+
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
+ WN+MI G A NG E A+DLF E+ ++PDSV+ A A G + A
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA-- 378
Query: 378 MDDY--VSKSEYASDIFVN--TALIDMYAKCGNVESAR-IVFDRTSEKDVIMWSAMI 429
D++ + K +Y + + T ++++ G +E A ++ + E+D ++WS+++
Sbjct: 379 -DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 4/250 (1%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
++ G + G I A+ LFDE + WN++I G+ R+ F++ ++M+ M+ + V PD
Sbjct: 198 MIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPD 257
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
GFT +L AC L +H ++R F + V L+ MY KCG I VF+
Sbjct: 258 GFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE 317
Query: 214 GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+ + W S+I G A NG A+ LF+++ + ++ D ++ + ++ A ++ +
Sbjct: 318 CAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHR 377
Query: 274 GRSLHGCIIKMGFEDEPDL--LISLTAFYAKCGQVIVARSFFDQMKTSS-VIMWNAMISG 330
++K + EP + + G + A + M ++W++++S
Sbjct: 378 ADEFFR-LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 331 YAKNGHAEEA 340
K G+ E A
Sbjct: 437 CRKIGNVEMA 446
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 255/460 (55%), Gaps = 39/460 (8%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H +I+ GF PD+ + L+ ++ KCG + AR VFD L T+ ++ +ISGY ++G
Sbjct: 56 IHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGL 115
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRA---YGDVDDLEQG--RSLHGCIIKMGFEDEP 290
E L L +M + K D L +++A G L + R +H IIK E +
Sbjct: 116 VKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDD 175
Query: 291 DLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA---------- 340
L+ +L Y K G++ AR+ F+ MK +V+ +MISGY G E+A
Sbjct: 176 VLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 341 ----------------------VDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWM 378
VD++ M P+ T S A + + S ++ Q +
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 379 DDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
+ KS + I + ++L+DMYAKCG + AR VFD+ EK+V W++MI GYG +G
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 439 WEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSC 497
EA+ L+ M++ + PN VTF+G L+AC+HSGLV +G+E+F M R + ++P+ EHY+C
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDP-Y 556
+VDL+GRAG L++A++F M P +W ALLS+C +H +V L AA +LF L+
Sbjct: 416 IVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADK 475
Query: 557 NTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
G Y+ LSN+YAS+ WD+V+ +R +M+ + +SK +G S
Sbjct: 476 RPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 186/421 (44%), Gaps = 59/421 (14%)
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
NS + +IH +I +G + + + KL+ G + YAR++FDE P + +N
Sbjct: 46 NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNY 105
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKAC-----TELLDFRLSCLVHGQ 179
+I GY + L + + + M G DG+T VLKA T +L L LVH +
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+I+ D + LV Y K G + AR VF+ + D VV TS+ISGY G +A
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 240 LRLFNQMRNTDVKL--------------------------------DWIALVSIVRAYGD 267
+FN + D+ + + S++ A
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
+ E G+ +H I+K G + SL YAKCG + AR FDQM+ +V W +M
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK-----LAQWMDDYV 382
I GY KNG+ EEA++LF M I+P+ VT A A + G + DY
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 383 SKSE---YASDIFVNTALIDMYAKCGNV----ESARIVFDRTSEKDVIMWSAMIMGYGLH 435
K + YA ++D+ + G++ E AR + +R D +W+A++ LH
Sbjct: 406 MKPKMEHYA-------CIVDLMGRAGDLNKAFEFARAMPERP---DSDIWAALLSSCNLH 455
Query: 436 G 436
G
Sbjct: 456 G 456
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 38/297 (12%)
Query: 272 EQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGY 331
+ G+ +H IIK GF+ + ++ I L + KCG + AR FD++ ++ +N MISGY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL-----KLAQWMDDYVSKSE 386
K+G +E + L + M K D T+ AS GS L + + + K +
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVFD------------------------------- 415
D + TAL+D Y K G +ESAR VF+
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 416 RTSEKDVIMWSAMIMGYGLHGQ-GWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVR 474
T KD+++++AM+ G+ G+ ++++Y +M++AG PN TF ++ AC+
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 475 EGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
G ++ + G+ + S ++D+ + G ++ A +M E V W +++
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMI 346
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/612 (28%), Positives = 280/612 (45%), Gaps = 70/612 (11%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGV 150
+T + + G I AR++FD D WN ++ YSR L + I ++ +R
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 151 DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV 210
PD ++F +L C L + + + VIR GF + V N L+ MY KC + A
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 211 VF-----DGLND----------------------------RTVVSWTSIISGYAQNGEAL 237
VF D N+ R +W +ISG+A G+
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRA-YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
L LF +M ++ K D S++ A D ++ GR +H ++K G+ + S+
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 297 TAFYAKCG------------QVIVARSF-------------------FDQMKTSSVIMWN 325
+FY K G +V+ S+ F +++ W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
MI+GY +NG E+A+ F EM+ + D + A + + L + + +
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 386 EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
+ +V AL+++YAKCG+++ A F + KD++ W+ M+ +G+HG +A+ LY
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLY 426
Query: 446 HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGR 504
M +G+ P++VTFIGLLT C+HSGLV EG +F M + + I +H +C++D+ GR
Sbjct: 427 DNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGR 486
Query: 505 AGYLDQAYDFIMKMSI----EPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
G+L +A D S S W LL AC H H LG +K L +P
Sbjct: 487 GGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS 546
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
+V LSNLY S+ W VR M E+G+ K G S IE+ ++ F VGD SHPR +E+
Sbjct: 547 FVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Query: 621 YNEIQRLERRLK 632
+ L+ ++
Sbjct: 607 SETLNCLQHEMR 618
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H IH LI G + ++ LVN + G I A + F + ++ D+ WN ++ +
Sbjct: 355 HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFG 414
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR-YGFGPDV 189
L +++Y M G+ PD TF +L C+ C++ +++ Y +V
Sbjct: 415 VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 190 FVQNGLVAMYAKCGNIGMAR 209
++ M+ + G++ A+
Sbjct: 475 DHVTCMIDMFGRGGHLAEAK 494
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 239/428 (55%), Gaps = 34/428 (7%)
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
A+ ++ ++ K D +++ V D+ GR +HG ++ GF+ ++ L
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAM------------------------------- 327
Y CG + AR FD+M V +WNA+
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 328 --ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKS 385
ISGYAK+G A EA+++F+ M+ N++PD VT+ + A A +GSL+L + + YV
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 386 EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLY 445
+ +N A+IDMYAK GN+ A VF+ +E++V+ W+ +I G HG G EA+ ++
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 446 HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGR 504
+ M +AGV PNDVTFI +L+AC+H G V G LF+ MR +GI P EHY C++DLLGR
Sbjct: 340 NRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGR 399
Query: 505 AGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL 564
AG L +A + I M + ++WG+LL+A +H + LGE A +L L+P N+G+Y+ L
Sbjct: 400 AGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLL 459
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEI 624
+NLY++ WD +R +M+ G+ K G S IE+ ++ F GD +HP+ + I+ +
Sbjct: 460 ANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
Query: 625 QRLERRLK 632
Q ++ +++
Sbjct: 520 QEMDLQIQ 527
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 200/429 (46%), Gaps = 40/429 (9%)
Query: 45 HVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
+ +SL GLN F SL + + + L Q H +I++GL + + K + SN GH+
Sbjct: 6 NALSLSSGLNW--FVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHL 63
Query: 105 CYARKLFDEFSHPDVFLWNAIIRGYS---RSNLFRNTIEMYGLMRREGVDPDGFTFPYVL 161
YA +F P+ +L N +IR S N I +Y + PD FTFP+VL
Sbjct: 64 RYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVL 123
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD-------- 213
K + D +HGQV+ +GF V V GL+ MY CG +G AR +FD
Sbjct: 124 KIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVN 183
Query: 214 ------------GLND-------------RTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
G D R VSWT +ISGYA++G A EA+ +F +M
Sbjct: 184 VWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLM 243
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
+V+ D + L++++ A D+ LE G + + G L ++ YAK G +
Sbjct: 244 ENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITK 303
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A F+ + +V+ W +I+G A +GH EA+ +F M+ ++P+ VT + A +
Sbjct: 304 ALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSH 363
Query: 369 VGSLKLAQWM-DDYVSKSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSEKDVIMWS 426
VG + L + + + SK +I +ID+ + G + E+ ++ + + +W
Sbjct: 364 VGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 427 AMIMGYGLH 435
+++ +H
Sbjct: 424 SLLAASNVH 432
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 136/327 (41%), Gaps = 49/327 (14%)
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC---GQVIVA 309
L+W V+ ++ +G+ +L+ + H +I G + +++ F C G + A
Sbjct: 14 LNW--FVTSLKIHGN--NLKTLKQSHCYMIITGLNRDN---LNVAKFIEACSNAGHLRYA 66
Query: 310 RSFFDQMKTSSVIMWNAMISGYA----KNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
S F + + N MI + N H+ A+ ++R++ KPD+ T
Sbjct: 67 YSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSI-AITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMW 425
+ +V + + + V + S + V T LI MY CG + AR +FD KDV +W
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 426 SAMIMGYGLHGQ-------------------GW--------------EAINLYHAMRQAG 452
+A++ GYG G+ W EAI ++ M
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMEN 245
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
V P++VT + +L+AC G + G + + G+ + V+D+ ++G + +A
Sbjct: 246 VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKAL 305
Query: 513 DFIMKMSIEPGVSVWGALLSACKIHRH 539
D + + E V W +++ H H
Sbjct: 306 D-VFECVNERNVVTWTTIIAGLATHGH 331
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 191/621 (30%), Positives = 302/621 (48%), Gaps = 98/621 (15%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVN-----------------------GSSNLGHICYAR-- 108
QIH +++ SGL NG++ ++N S N+ Y R
Sbjct: 62 QIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSR 121
Query: 109 ------KLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
KLFD + +I+GY+++N + +E++ MR G+ + T V+
Sbjct: 122 RLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVIS 181
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVS 222
AC+ L ++ I+ VFV L+ MY C + AR +FD + +R +V+
Sbjct: 182 ACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVT 241
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDV------------------------------- 251
W +++GY++ G +A LF+Q+ D+
Sbjct: 242 WNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGM 301
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA---------- 301
K + +V ++ A +G LHG I+K GF+ L ++ FYA
Sbjct: 302 KPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQ 361
Query: 302 ---------------------KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
K G V AR FDQ + WNAMISGYA++ + A
Sbjct: 362 QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLA 421
Query: 341 VDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
+ LFREMI+ + +KPD++T+ S A + +GSL+ + DY++ S + + A+ID
Sbjct: 422 LHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIID 481
Query: 400 MYAKCGNVESARIVFDRT---SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
MYAKCG++E+A +F +T S + W+A+I G HG A++LY ++ + PN
Sbjct: 482 MYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPN 541
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
+TF+G+L+AC H+GLV G F M+ GIEP +HY C+VDLLG+AG L++A + I
Sbjct: 542 SITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMI 601
Query: 516 MKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWD 575
KM ++ V +WG LLSA + H +V + E AA +L ++DP + G V LSN+YA + W+
Sbjct: 602 KKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWE 661
Query: 576 HVAHVRVLMREKGLSKDLGYS 596
VA VR MR + + +S
Sbjct: 662 DVALVREEMRTRDVEWSRAFS 682
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 263/509 (51%), Gaps = 6/509 (1%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
L++G G + A LF P+V WN +I G+ R +E M+REG+ D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLD 237
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
GF P LKAC+ + +H V++ G F + L+ MY+ CG++ A VF
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 214 GLN---DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
+ +V W S++SG+ N E AL L Q+ +D+ D L ++ + +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
L G +H ++ G+E + + L +A G + A F ++ +I ++ +I G
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
K+G A LFRE+I + D V + + + SL + + K Y S+
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
TAL+DMY KCG +++ ++FD E+DV+ W+ +I+G+G +G+ EA +H M
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLD 509
G+ PN VTF+GLL+AC HSGL+ E M+ +G+EP EHY CVVDLLG+AG
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 510 QAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
+A + I KM +EP ++W +LL+AC H++ L A+KL P + Y LSN YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 570 SSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
+ +WD ++ VR ++ G +K+ G S I
Sbjct: 658 TLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 153/583 (26%), Positives = 248/583 (42%), Gaps = 88/583 (15%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
+ I +I G+ N F+ +++ + + A K+FDE S ++ W ++ GY+
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSD 84
Query: 133 NLFRNTIEMYG-LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH---------GQVIR 182
IE+Y ++ E + F + VLKAC + D +L LV+ G V+
Sbjct: 85 GKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVL 144
Query: 183 YGFGPDVFVQNG----------------------LVAMYAKCGNIGMARVVFDGLNDRTV 220
D++V+NG L++ Y K G + A +F + V
Sbjct: 145 MNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV 204
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
VSW +ISG+ G AL +M+ + LD AL ++A L G+ LH C
Sbjct: 205 VSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK---TSSVIMWNAMISGYAKNGHA 337
++K G E P + +L Y+ CG +I A F Q K SSV +WN+M+SG+ N
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E A+ L ++ ++ DS T+ A +L+L + V S Y D V + L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+D++A GN++ A +F R KD+I +S +I G G A L+ + + G+ +
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 458 VTFIGLLTACNHSGLVREGW-ELFHCM---RGFGIEPRNEHYSCVVDL------------ 501
+L C S L GW + H + +G+ EP + +VD+
Sbjct: 444 FIVSNILKVC--SSLASLGWGKQIHGLCIKKGYESEPVTA--TALVDMYVKCGEIDNGVV 499
Query: 502 -------------------LGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRH 539
G+ G +++A+ + KM IEP + LLSAC RH
Sbjct: 500 LFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC---RH 556
Query: 540 VTLGEYAAKKL------FSLDPYNTGHYVQLSNLYASSRLWDH 576
L E A L + L+PY HY + +L + L+
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPY-LEHYYCVVDLLGQAGLFQE 598
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 195/427 (45%), Gaps = 35/427 (8%)
Query: 161 LKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV 220
L+ C ++ F+ + VI+ G +VF+ N +++MY + A VFD +++R +
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVK-LDWIALVSIVRAYGDVDDLEQGRSLHG 279
V+WT+++SGY +G+ +A+ L+ +M +++ + + ++++A G V D++ G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
I K + L+ S+ Y K G++I A S F ++ S WN +ISGY K G +E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 340 AVDLFREMITRNI--------------KP----------------DSVTVRSAALASAQV 369
AV LF M N+ P D + A +
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS---EKDVIMWS 426
G L + + + V KS S F +ALIDMY+ CG++ A VF + V +W+
Sbjct: 252 GLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWN 311
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
+M+ G+ ++ + A+ L + Q+ +C + T G L C + +R G ++ +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYA 546
G E S +VDL G + A+ ++ + + L+ C +L Y
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 547 AKKLFSL 553
++L L
Sbjct: 431 FRELIKL 437
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 142/299 (47%), Gaps = 3/299 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H+ ++VSG + + + + LV+ +N+G+I A KLF + D+ ++ +IRG +S
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
++ + + G+D D F +LK C+ L +HG I+ G+ +
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
LV MY KCG I V+FDG+ +R VVSWT II G+ QNG EA R F++M N ++
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 254 DWIALVSIVRAYGDVDDLEQGRS-LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ + + ++ A LE+ RS L + G E + + + G A
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Query: 313 FDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
++M +W ++++ + +A V + E + + D S + A A +G
Sbjct: 603 INKMPLEPDKTIWTSLLTACGTHKNA-GLVTVIAEKLLKGFPDDPSVYTSLSNAYATLG 660
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 138/320 (43%), Gaps = 33/320 (10%)
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+D + + +R G V ++G S+ +IK G + ++ + Y + A
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL-ASAQVGS 371
FD+M +++ W M+SGY +G +A++L+R M+ + + + SA L A VG
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
++L + + + K D+ + +++DMY K G + A F W+ +I G
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 432 YGLHGQGWEAINLYHAMRQAGVC--------------PNDVTFI------GL-------- 463
Y G EA+ L+H M Q V P + F+ GL
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALP 242
Query: 464 --LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI--MKMS 519
L AC+ GL+ G +L C+ G+E S ++D+ G L A D K++
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 520 IEPGVSVWGALLSACKIHRH 539
+ V+VW ++LS I+
Sbjct: 303 VNSSVAVWNSMLSGFLINEE 322
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 232/428 (54%), Gaps = 4/428 (0%)
Query: 212 FDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDL 271
F N R + G G EA+ L + ++ ++++ +++ +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 272 EQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGY 331
+G+ +H + +GF L + L YA G + A F +K +I WNAMISGY
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
+ G +E + ++ +M I PD T S A + + L+ + + K S+I
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNI 244
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
V++AL+DMY KC + VFD+ S ++VI W+++I GYG HG+ E + + M++
Sbjct: 245 IVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
G PN VTF+ +LTACNH GLV +GWE F+ M R +GIEP +HY+ +VD LGRAG L +
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYAS 570
AY+F+MK + VWG+LL AC+IH +V L E AA K LDP N G+YV +N YAS
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERR 630
L + + VR M G+ KD GYS IE+ G++ F D SH S++IY ++ +
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSF 484
Query: 631 LKEIGFVP 638
+I + P
Sbjct: 485 FMDIDYYP 492
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 140 EMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMY 199
E GL+ G+ + T+ +L+ C + ++ +H Q+ GF + +++ L+ +Y
Sbjct: 94 EAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILY 153
Query: 200 AKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
A G++ A ++F L R ++ W ++ISGY Q G E L ++ MR + D
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
S+ RA +D LE G+ H +IK + + +L Y KC FDQ+ T
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMD 379
+VI W ++ISGY +G E + F +M +P+ VT L + G L W
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFL-VVLTACNHGGLVDKGWEH 332
Query: 380 DYVSKSEYASDIFVN--TALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHG 436
Y K +Y + A++D + G ++ A V ++ +W +++ +HG
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 4/239 (1%)
Query: 30 KFIKHLCSSSVLNLGHVVSLDHGLNLD-SFYASLIDNSTHKRHL---DQIHNQLIVSGLK 85
K +K LC + L + GL ++ YA L+ ++ +IH Q+ V G
Sbjct: 81 KTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFA 140
Query: 86 HNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM 145
N +L KL+ + G + A LF D+ WNA+I GY + L + + +Y M
Sbjct: 141 LNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 146 RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNI 205
R+ + PD +TF V +AC+ L H +I+ ++ V + LV MY KC +
Sbjct: 201 RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSF 260
Query: 206 GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
VFD L+ R V++WTS+ISGY +G+ E L+ F +M+ + + + + ++ A
Sbjct: 261 SDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/464 (33%), Positives = 247/464 (53%), Gaps = 35/464 (7%)
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
N+ AR +FD + + +I Y + + E++ L+N + ++ I
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
A R LH + GFE + +L YAK G + AR FD+M V +
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNI------------------------------- 352
WNAMI+GY + G + A++LF M +N+
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 353 -KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
KP+ +TV S A A +G L++ + ++ Y ++ + +I+V A I+MY+KCG ++ A+
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 412 IVFDRT-SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
+F+ +++++ W++MI HG+ EA+ L+ M + G P+ VTF+GLL AC H
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 471 GLVREGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGA 529
G+V +G ELF M I P+ EHY C++DLLGR G L +AYD I M ++P VWG
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 530 LLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGL 589
LL AC H +V + E A++ LF L+P N G+ V +SN+YA++ WD V +R LM+++ +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 590 SKDLGYS-VIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLK 632
+K GYS +E+ + F V DKSHPRS EIY ++ + RR+K
Sbjct: 451 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 39/400 (9%)
Query: 72 LDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR 131
+ Q+H + +G+ L+ +L+ + ++ YARKLFD + FL+N +I+ Y
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLL----IPNLVYARKLFDHHQNSCTFLYNKLIQAYYV 59
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
+ +I +Y L+ +G+ P TF ++ A R L+H Q R GF D F
Sbjct: 60 HHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFC 119
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDR-------------------------------TV 220
L+ YAK G + AR VFD ++ R V
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV 179
Query: 221 VSWTSIISGYAQNGEALEALRLFNQM-RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
SWT++ISG++QNG EAL++F M ++ VK + I +VS++ A ++ +LE GR L G
Sbjct: 180 TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEG 239
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM-KTSSVIMWNAMISGYAKNGHAE 338
+ GF D + + Y+KCG + VA+ F+++ ++ WN+MI A +G +
Sbjct: 240 YARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHD 299
Query: 339 EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA-L 397
EA+ LF +M+ KPD+VT LA G + Q + + + S + +
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 398 IDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHG 436
ID+ + G ++ A ++ + D ++W ++ HG
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHG 399
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 151/355 (42%), Gaps = 76/355 (21%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R L +H+Q SG + + F T L+ + LG +C AR++FDE S DV +WNA+I GY
Sbjct: 99 RPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGY 158
Query: 130 SRSNLFRNTIEMYGLMRR--------------------------------EGVDPDGFTF 157
R + +E++ M R + V P+ T
Sbjct: 159 QRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 158 PYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL-N 216
VL AC L + + + G GF +++V N + MY+KCG I +A+ +F+ L N
Sbjct: 219 VSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGN 278
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
R + SW S+I A +G+ EAL LF QM K D + V ++ A
Sbjct: 279 QRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA-----------C 327
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK-----TSSVIMWNAMISGY 331
+HG G V+ + F M+ + + + MI
Sbjct: 328 VHG------------------------GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLL 363
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
+ G +EA DL + M +KPD+V + A + G++++A+ + + K E
Sbjct: 364 GRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/570 (31%), Positives = 289/570 (50%), Gaps = 49/570 (8%)
Query: 101 LGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM--RREGVDPDGFTFP 158
+G I ARKLFD DV W +I GY + R E++ + R+ V
Sbjct: 59 VGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSG 118
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
Y+ + + + V+ + N ++ YA+ G I A +FD + +R
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSW---------NTMIDGYAQSGRIDKALELFDEMPER 169
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
+VSW S++ Q G EA+ LF +M DV + W A+V + G VD + R L
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV-VSWTAMVDGLAKNGKVD---EARRLF 225
Query: 279 GCIIK----------MGFE-----DEPDLLI------------SLTAFYAKCGQVIVARS 311
C+ + G+ DE D L ++ + + ++ A
Sbjct: 226 DCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACG 285
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVG 370
FD+M +VI W MI+GY +N EEA+++F +M+ ++KP+ T S A + +
Sbjct: 286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLA 345
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR--TSEKDVIMWSAM 428
L Q + +SKS + + V +AL++MY+K G + +AR +FD ++D+I W++M
Sbjct: 346 GLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSM 405
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH-CMRGFG 487
I Y HG G EAI +Y+ MR+ G P+ VT++ LL AC+H+GLV +G E F +R
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDES 465
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAA 547
+ R EHY+C+VDL GRAG L +FI S +GA+LSAC +H V++ +
Sbjct: 466 LPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 548 KKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVF 607
KK+ + G YV +SN+YA++ + A +R+ M+EKGL K G S +++ + +F
Sbjct: 526 KKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLF 585
Query: 608 HVGDKSHPR---SDEIYNEIQRLERRLKEI 634
VGDKSHP+ D I ++++ R+ K +
Sbjct: 586 VVGDKSHPQFEALDSILSDLRNKMRKNKNV 615
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 185/391 (47%), Gaps = 58/391 (14%)
Query: 187 PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
P V L+ K G I AR +FDGL +R VV+WT +I+GY + G+ EA LF+++
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV 103
Query: 247 RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI----SLTAFYAK 302
+ + W A+VS Y RS I +M F++ P+ + ++ YA+
Sbjct: 104 DSRKNVVTWTAMVS---GY--------LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQ 152
Query: 303 CGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI---------- 352
G++ A FD+M +++ WN+M+ + G +EA++LF M R++
Sbjct: 153 SGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL 212
Query: 353 ---------------KPDSVTVRSAALAS--AQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
P+ + A+ + AQ + A + + + ++AS + T
Sbjct: 213 AKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMIT 272
Query: 396 ALI---DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQA 451
I +M CG +FDR EK+VI W+ MI GY + + EA+N++ M R
Sbjct: 273 GFIRNREMNKACG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 452 GVCPNDVTFIGLLTACNH-SGLVREGWELFHCMRGFGIEPRNE-HYSCVVDLLGRAGYLD 509
V PN T++ +L+AC+ +GLV EG ++ H + + +NE S ++++ ++G L
Sbjct: 326 SVKPNVGTYVSILSACSDLAGLV-EGQQI-HQLISKSVHQKNEIVTSALLNMYSKSGELI 383
Query: 510 QAYD-FIMKMSIEPGVSVWGALLSACKIHRH 539
A F + + + W ++++ H H
Sbjct: 384 AARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 31 FIKHLCSSSVL-NLGHVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGF 89
F K L SV N+G VS+ L+ S A L++ QIH + S + N
Sbjct: 318 FSKMLRDGSVKPNVGTYVSI---LSACSDLAGLVEGQ-------QIHQLISKSVHQKNEI 367
Query: 90 LITKLVNGSSNLGHICYARKLFDE--FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRR 147
+ + L+N S G + ARK+FD D+ WN++I Y+ + IEMY MR+
Sbjct: 368 VTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK 427
Query: 148 EGVDPDGFTFPYVLKACT 165
G P T+ +L AC+
Sbjct: 428 HGFKPSAVTYLNLLFACS 445
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/491 (31%), Positives = 261/491 (53%), Gaps = 2/491 (0%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH+ + GL + + T L++ S G + A +LF DV W+A+I Y ++
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQ 381
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
I ++ M R + P+ T VL+ C + RL +H I+ ++
Sbjct: 382 HDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATA 441
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
+++MYAKCG A F+ L + V++ ++ GY Q G+A +A ++ M+ V D
Sbjct: 442 VISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPD 501
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+V +++ D +G ++G IIK GF+ E + +L + KC + A FD
Sbjct: 502 SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Query: 315 QMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+ S + WN M++GY +G AEEAV FR+M +P++VT + A+A++ +L+
Sbjct: 562 KCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALR 621
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + + + + S V +L+DMYAKCG +ES+ F S K ++ W+ M+ Y
Sbjct: 622 VGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYA 681
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRN 492
HG A++L+ +M++ + P+ V+F+ +L+AC H+GLV EG +F M IE
Sbjct: 682 AHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEV 741
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
EHY+C+VDLLG+AG +A + + +M ++ V VWGALL++ ++H ++ L A +L
Sbjct: 742 EHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVK 801
Query: 553 LDPYNTGHYVQ 563
L+P N HY Q
Sbjct: 802 LEPLNPSHYSQ 812
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/459 (34%), Positives = 239/459 (52%), Gaps = 11/459 (2%)
Query: 70 RHLDQIHNQLIVSGLK-HNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRG 128
R L Q+H LIVSGLK HN +L+N S +R +FD P V LWN++IRG
Sbjct: 19 RCLLQVHGSLIVSGLKPHN-----QLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRG 73
Query: 129 YSRSNLFRNTIEMYGLMRRE-GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP 187
Y+R+ L R + +G M E G+DPD ++F + LKAC +DF+ +H + G
Sbjct: 74 YTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES 133
Query: 188 DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR 247
DV++ LV MY K ++ AR VFD ++ + VV+W +++SG AQNG + AL LF+ MR
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
+ V +D ++L +++ A ++ + R LHG +IK GF L Y C +
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLY 251
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
A S F+++ W M++ YA NG EE ++LF M +++ + V SA A+A
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAA 311
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
VG L + DY + D+ V T+L+ MY+KCG +E A +F ++DV+ WSA
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA 371
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GF 486
MI Y GQ EAI+L+ M + + PN VT +L C R G + HC
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKA 430
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVS 525
IE E + V+ + + G A ++ I+ V+
Sbjct: 431 DIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 238/465 (51%), Gaps = 4/465 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+IH+ + GL+ + ++ T LV + AR++FD+ DV WN ++ G +++
Sbjct: 121 RIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV-Q 192
+ ++ MR VD D + ++ A ++L + +HG VI+ GF +F
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFS 237
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
+GL+ MY C ++ A VF+ + + SW ++++ YA NG E L LF+ MRN DV+
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
++ +A S ++A V DL +G ++H ++ G + + SL + Y+KCG++ +A
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F ++ V+ W+AMI+ Y + G +EA+ LFR+M+ +IKP++VT+ S A V +
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+L + + Y K++ S++ TA+I MYAKCG A F+R KD + ++A+ GY
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
G +A ++Y M+ GVCP+ T +G+L C G ++ + G +
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
++++ + L A K E W +++ +H
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 272/533 (51%), Gaps = 10/533 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H + +G + + L++ + RK+FDE H D + +II +
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL-LDFRLSCLVHGQV-IRYGFGPDVFV 191
L +++ M G P +L CT + +++ + H V + V +
Sbjct: 128 LLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLL 187
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
LV MY K + A VFD + + VSWT++ISG N + LF M+ ++
Sbjct: 188 STALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENL 247
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSL----HGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
+ + + L+S++ A +L G SL HG + G + L + Y +CG V
Sbjct: 248 RPNRVTLLSVLPA---CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVS 304
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
++R F+ K V+MW++MISGYA+ G E ++L +M I+ +SVT+ + A
Sbjct: 305 LSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT 364
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
L A + + K + S I + ALIDMYAKCG++ +AR VF +EKD++ WS+
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSS 424
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG 487
MI YGLHG G EA+ ++ M + G +D+ F+ +L+ACNH+GLV E +F +
Sbjct: 425 MINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH 484
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH-RHVTLGEYA 546
+ EHY+C ++LLGR G +D A++ + M ++P +W +LLSAC+ H R G+
Sbjct: 485 MPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKII 544
Query: 547 AKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIE 599
A +L +P N +YV LS ++ S + VR +M+ + L+K G+S IE
Sbjct: 545 ANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 207/426 (48%), Gaps = 20/426 (4%)
Query: 126 IRGYSRSNLFRNTIEMYGLMRREGVDPDGFT--FPYVLKACT-ELLDFRLSCLVHGQVIR 182
++G + + +Y L + + +GFT P V+KAC + F L +H ++
Sbjct: 17 LKGLVSDQFYDEALRLYKL-KIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 183 YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRL 242
G D V N L++MYAK R VFD + R VS+ SII+ Q+G EA++L
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 243 FNQM------RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL-IS 295
+M +++ +AL + + + V R H ++ E LL +
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKV-----ARMFHALVLVDERMQESVLLSTA 190
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
L Y K A FDQM+ + + W AMISG N + E VDLFR M N++P+
Sbjct: 191 LVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPN 250
Query: 356 SVTVRSAALASAQV--GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
VT+ S A ++ GS L + + + + +D + A + MY +CGNV +R++
Sbjct: 251 RVTLLSVLPACVELNYGS-SLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVL 309
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLV 473
F+ + +DV+MWS+MI GY G E +NL + MR+ G+ N VT + +++AC +S L+
Sbjct: 310 FETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL 369
Query: 474 REGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ + G + ++D+ + G L A + +++ + VS W ++++A
Sbjct: 370 SFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVS-WSSMINA 428
Query: 534 CKIHRH 539
+H H
Sbjct: 429 YGLHGH 434
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/478 (32%), Positives = 253/478 (52%), Gaps = 33/478 (6%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
++ +I +G F+ +V K ++ A +F+ +++ V + SII Y N
Sbjct: 29 INASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 236 ALEALRLFNQMRNTDVKL-DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG--------- 285
+ +R++ Q+ +L D + ++ + G+ +HG + K G
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 286 --------FED------------EPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
F+D E D++ SL + YA+ GQ+ A+ F M +++
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
W AMISGY G EA+D FREM I+PD +++ S + AQ+GSL+L +W+ Y
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE 268
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN 443
+ + V ALI+MY+KCG + A +F + KDVI WS MI GY HG AI
Sbjct: 269 RRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIE 328
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLL 502
++ M++A V PN +TF+GLL+AC+H G+ +EG F MR + IEP+ EHY C++D+L
Sbjct: 329 TFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL 388
Query: 503 GRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYV 562
RAG L++A + M ++P +WG+LLS+C+ ++ + A L L+P + G+YV
Sbjct: 389 ARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYV 448
Query: 563 QLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
L+N+YA W+ V+ +R ++R + + K G S+IE+N +Q F GD S P EI
Sbjct: 449 LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEI 506
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 212/414 (51%), Gaps = 35/414 (8%)
Query: 51 HGL-NLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK 109
HG+ +++++ + + +I+ +I+ GL + F++TK+V+ + + YA +
Sbjct: 4 HGIREVENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 110 LFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD-PDGFTFPYVLKACTELL 168
LF++ S+P+VFL+N+IIR Y+ ++L+ + I +Y + R+ + PD FTFP++ K+C L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 169 DFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIIS 228
L VHG + ++G V +N L+ MY K ++ A VFD + +R V+SW S++S
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 229 GYAQNGEA-------------------------------LEALRLFNQMRNTDVKLDWIA 257
GYA+ G+ +EA+ F +M+ ++ D I+
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEIS 243
Query: 258 LVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK 317
L+S++ + + LE G+ +H + GF + + +L Y+KCG + A F QM+
Sbjct: 244 LISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQME 303
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA-Q 376
VI W+ MISGYA +G+A A++ F EM +KP+ +T A + VG + +
Sbjct: 304 GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMI 429
+ D + I LID+ A+ G +E A I + D +W +++
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLL 417
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 175/404 (43%), Gaps = 60/404 (14%)
Query: 20 SFEIPTCLFLKFIKHLCSS------------SVLNLG---HVVSLDHGLNLDSFYASLID 64
SFE+P F+ C+S + G HVV+ + +++ + L+D
Sbjct: 103 SFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVD 162
Query: 65 NSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA 124
HK D+++ + ++S L++G + LG + A+ LF + W A
Sbjct: 163 --AHKV-FDEMYERDVISW--------NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTA 211
Query: 125 IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG 184
+I GY+ + ++ + M+ G++PD + VL +C +L L +H R G
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
F V N L+ MY+KCG I A +F + + V+SW+++ISGYA +G A A+ FN
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M+ VK + I + ++ A V ++G +++ ++ EP
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD-MMRQDYQIEP-------------- 376
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
+ + +I A+ G E AV++ + M +KPDS S
Sbjct: 377 ---------------KIEHYGCLIDVLARAGKLERAVEITKTM---PMKPDSKIWGSLLS 418
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ G+L +A D++ + E D+ L ++YA G E
Sbjct: 419 SCRTPGNLDVALVAMDHLVELE-PEDMGNYVLLANIYADLGKWE 461
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 162/523 (30%), Positives = 268/523 (51%), Gaps = 15/523 (2%)
Query: 68 HKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIR 127
H + Q H ++ G+ ++ FL KL+ + + A KLFDE ++ WN +I
Sbjct: 51 HLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIH 110
Query: 128 GYSRSNLFRNTIEMYGL--MRR---EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR 182
G + + N G + R V D +F +++ CT+ + + +H +++
Sbjct: 111 GVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK 170
Query: 183 YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNG---EALEA 239
G F LV Y KCG I AR VF+ + DR +V W +++S Y NG EA
Sbjct: 171 QGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL 230
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
L+L +N + D+ S++ A +EQG+ +H + K+ ++ + + +L
Sbjct: 231 LKLMGSDKNR-FRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNM 285
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
YAK + AR F+ M +V+ WNAMI G+A+NG EA+ LF +M+ N++PD +T
Sbjct: 286 YAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTF 345
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
S + A+ ++ + + V+K A + V +LI Y++ GN+ A + F E
Sbjct: 346 ASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE 405
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
D++ W+++I HG E++ ++ +M Q + P+ +TF+ +L+AC+H GLV+EG
Sbjct: 406 PDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRC 464
Query: 480 FHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHR 538
F M F IE +EHY+C++DLLGRAG++D+A D + M EP A C IH
Sbjct: 465 FKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHE 524
Query: 539 HVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVR 581
++ AKKL ++P +Y LSN Y S W+ A +R
Sbjct: 525 KRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLR 567
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 288/564 (51%), Gaps = 46/564 (8%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H Q++ +G + F T LV+ + + A K+ DE + NA + G +
Sbjct: 53 LHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGF 112
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-FRLSCLVHGQVIRYGFGPDVFVQN 193
R+ M+G R G + T VL C ++ +L CL ++ GF +V+V
Sbjct: 113 CRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLA----MKSGFEMEVYVGT 168
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN-TDVK 252
LV+MY++CG +A +F+ + ++VV++ + ISG +NG +FN MR + +
Sbjct: 169 SLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE 228
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ + V+ + A + +L+ GR LHG ++K F+ E + +L Y+KC A
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 313 FDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG- 370
F ++K T ++I WN++ISG NG E AV+LF ++ + +KPDS T S +Q+G
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGK 348
Query: 371 ----------------------------------SLKLAQWMDDYVSKSEYASDIFVNTA 396
+LK + + +V K+ DIFV T+
Sbjct: 349 VIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTS 408
Query: 397 LIDMYAKCGNVESARIVFDR--TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC 454
LIDMY KCG AR +FDR KD + W+ MI GYG HG+ AI ++ +R+ V
Sbjct: 409 LIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE 468
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
P+ TF +L+AC+H G V +G ++F M+ +G +P EH C++DLLGR+G L +A +
Sbjct: 469 PSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKE 528
Query: 514 FIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRL 573
I +MS +LL +C+ H LGE AA KL L+P N +V LS++YA+
Sbjct: 529 VIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALER 587
Query: 574 WDHVAHVRVLMREKGLSKDLGYSV 597
W+ V +R ++ +K L K G S+
Sbjct: 588 WEDVESIRQVIDQKQLVKLPGLSL 611
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 188/354 (53%), Gaps = 8/354 (2%)
Query: 151 DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV 210
P+ FTFP +LK+C +L D ++H QV++ GF DVF LV+MY K + A
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
V D + +R + S + +SG +NG +A R+F R + ++ + + S++ G D
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVL---GGCGD 144
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
+E G LH +K GFE E + SL + Y++CG+ ++A F+++ SV+ +NA ISG
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 331 YAKNGHAEEAVDLFREMIT-RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+NG +F M + +P+ VT +A A A + +L+ + + V K E+
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSE-KDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
+ V TALIDMY+KC +SA IVF + +++I W+++I G ++GQ A+ L+ +
Sbjct: 265 ETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL 324
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLL 502
G+ P+ T+ L++ + G V E ++ F M + P C+ LL
Sbjct: 325 DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVP---SLKCLTSLL 375
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 174/389 (44%), Gaps = 52/389 (13%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H + SG + ++ T LV+ S G A ++F++ H V +NA I G +
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 134 LFRNTIEMYGLMRR-EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
+ ++ LMR+ +P+ TF + AC LL+ + +HG V++ F + V
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 193 NGLVAMYAKCGNIGMARVVFDGLND-RTVVSWTSII------------------------ 227
L+ MY+KC A +VF L D R ++SW S+I
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 228 -----------SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
SG++Q G+ +EA + F +M + + L S++ A D+ L+ G+
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM--KTSSVIMWNAMISGYAKN 334
+HG +IK E + +L SL Y KCG AR FD+ K + WN MISGY K+
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL-------KLAQWMDDYVSKSEY 387
G E A+++F + ++P T + A + G++ +L Q Y +E+
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDR 416
+ID+ + G + A+ V D+
Sbjct: 510 IG------CMIDLLGRSGRLREAKEVIDQ 532
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 271 bits (694), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/488 (32%), Positives = 260/488 (53%), Gaps = 40/488 (8%)
Query: 176 VHGQVIRYGFGPD-VFVQNGL-VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
+H +I G + FV L + + G++ A L+D W +I G++ +
Sbjct: 27 IHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNS 86
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
+++ ++ QM + D + ++++ + + + G SLH ++K G E DL
Sbjct: 87 RNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE--WDLF 144
Query: 294 I---------------------------------SLTAFYAKCGQVIVARSFFDQMKTSS 320
I S+ YAK G V+ AR FD+M
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQWMD 379
V+ W++MI GY K G +A+++F +M+ + K + VT+ S A A +G+L + +
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 380 DYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS--EKDVIMWSAMIMGYGLHGQ 437
Y+ + + T+LIDMYAKCG++ A VF R S E D +MW+A+I G HG
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
Query: 438 GWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSC 497
E++ L+H MR++ + P+++TF+ LL AC+H GLV+E W F ++ G EP++EHY+C
Sbjct: 325 IRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYAC 384
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYN 557
+VD+L RAG + A+DFI +M I+P S+ GALL+ C H ++ L E KKL L P+N
Sbjct: 385 MVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHN 444
Query: 558 TGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRS 617
G YV L+N+YA ++ + +R M +KG+ K G+S+++++G F DK+H S
Sbjct: 445 DGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 618 DEIYNEIQ 625
D+IY +Q
Sbjct: 505 DKIYAVLQ 512
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 186/375 (49%), Gaps = 36/375 (9%)
Query: 72 LDQIHNQLIVSGLKHNGFLITKLVNGS--SNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
L +IH LI GL +++ ++ S S+ G + YA K + S P + WN +IRG+
Sbjct: 24 LYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGF 83
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
S S +I +Y M R G+ PD T+P+++K+ + L + +L +H V++ G D+
Sbjct: 84 SNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDL 143
Query: 190 FVQNGLVAM-------------------------------YAKCGNIGMARVVFDGLNDR 218
F+ N L+ M YAK G++ AR+VFD +++R
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSER 203
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQ-MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
VV+W+S+I GY + GE +AL +F+Q MR K + + +VS++ A + L +G+++
Sbjct: 204 DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV 263
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF--DQMKTSSVIMWNAMISGYAKNG 335
H I+ + L SL YAKCG + A S F +K + +MWNA+I G A +G
Sbjct: 264 HRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
E++ LF +M I PD +T A + G +K A + +S
Sbjct: 324 FIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYA 383
Query: 396 ALIDMYAKCGNVESA 410
++D+ ++ G V+ A
Sbjct: 384 CMVDVLSRAGLVKDA 398
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/437 (33%), Positives = 252/437 (57%), Gaps = 10/437 (2%)
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN 216
F +L+ C L VH + Y ++ + + LV +YA CG +A VFD ++
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 217 DR--TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
R + +W S+ISGYA+ G+ +A+ L+ QM VK D +++A G + ++ G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
++H ++K GF + +L +L YAKCG ++ AR+ FD + + WN+M++GY +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN 394
G EA+D+FR M+ I+PD V + S A+V S K + + +V + ++ V
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 395 TALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC 454
ALI +Y+K G + A +FD+ E+D + W+A+I H + + + M +A
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAK 388
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
P+ +TF+ +L+ C ++G+V +G LF M + +GI+P+ EHY+C+V+L GRAG +++AY
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 514 FIMK-MSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSR 572
I++ M +E G +VWGALL AC +H + +GE AA++LF L+P N ++ L +Y+ ++
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 573 LWDHVAHVRVLMREKGL 589
+ V VR +M ++GL
Sbjct: 509 RAEDVERVRQMMVDRGL 525
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 208/393 (52%), Gaps = 16/393 (4%)
Query: 53 LNLDSFYASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK 109
L +ASL++ R +D ++H+ + L++N + +KLV ++ G+ A +
Sbjct: 89 LTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHE 148
Query: 110 LFDEFSHPD--VFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL 167
+FD S D F WN++I GY+ + + + +Y M +GV PD FTFP VLKAC +
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208
Query: 168 LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
++ +H +++ GFG DV+V N LV MYAKCG+I AR VFD + + VSW S++
Sbjct: 209 GSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSML 268
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+GY +G EAL +F M ++ D +A+ S++ V + GR LHG +I+ G E
Sbjct: 269 TGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGME 325
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
E + +L Y+K GQ+ A FDQM + WNA+IS ++KN + + F +M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQM 382
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCG 405
N KPD +T S A G ++ + + +SK EY D + ++++Y + G
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSK-EYGIDPKMEHYACMVNLYGRAG 441
Query: 406 NVESA--RIVFDRTSEKDVIMWSAMIMGYGLHG 436
+E A IV + E +W A++ LHG
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 249/493 (50%), Gaps = 38/493 (7%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A +F E +V WN +I G+ + ++E MR G P+ T VL AC
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC-- 360
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
FR G++ R +F + +V +W ++
Sbjct: 361 ---FR------------------------------SGDVETGRRIFSSIPQPSVSAWNAM 387
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
+SGY+ EA+ F QM+ ++K D L I+ + + LE G+ +HG +I+
Sbjct: 388 LSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEI 447
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQ-MKTSSVIMWNAMISGYAKNGHAEEAVDLFR 345
++ L A Y++C ++ ++ FD + + WN+MISG+ N +A+ LFR
Sbjct: 448 SKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFR 507
Query: 346 EM-ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
M T + P+ + + + +++ SL + V KS Y SD FV TAL DMY KC
Sbjct: 508 RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKC 567
Query: 405 GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
G ++SAR FD K+ ++W+ MI GYG +G+G EA+ LY M +G P+ +TF+ +L
Sbjct: 568 GEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVL 627
Query: 465 TACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG 523
TAC+HSGLV G E+ M R GIEP +HY C+VD LGRAG L+ A +
Sbjct: 628 TACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSS 687
Query: 524 VSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVL 583
+W LLS+C++H V+L A+KL LDP ++ YV LSN Y+S R WD A ++ L
Sbjct: 688 SVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGL 747
Query: 584 MREKGLSKDLGYS 596
M + + K G S
Sbjct: 748 MNKNRVHKTPGQS 760
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 10/362 (2%)
Query: 82 SGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEM 141
SG + N ++ G + R++F P V WNA++ GYS + I
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISN 403
Query: 142 YGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAK 201
+ M+ + + PD T +L +C L +HG VIR + + +GL+A+Y++
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSE 463
Query: 202 CGNIGMARVVFDG-LNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL-DWIALV 259
C + ++ +FD +N+ + W S+ISG+ N +AL LF +M T V + +
Sbjct: 464 CEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFA 523
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
+++ + + L GR HG ++K G+ + + +LT Y KCG++ AR FFD +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRK 583
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG----SLKLA 375
+ ++WN MI GY NG +EAV L+R+MI+ KPD +T S A + G L++
Sbjct: 584 NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEIL 643
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK-DVIMWSAMIMGYGL 434
M + E D ++ ++D + G +E A + + T K ++W ++ +
Sbjct: 644 SSM-QRIHGIEPELDHYI--CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV 700
Query: 435 HG 436
HG
Sbjct: 701 HG 702
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 189/434 (43%), Gaps = 76/434 (17%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNA---------- 124
IH ++ G+K + +L +L++ G YARK+FDE S DV+ WNA
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 125 ---------------------IIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKA 163
+I R + +Y M +G P FT VL A
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 164 CTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARV-VFDGLNDRTVVS 222
C+++LD HG ++ G ++FV N L++MYAKCG I V VF+ L+ VS
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIAL---VSIVRAYGDVDDL------EQ 273
+T++I G A+ + LEA+++F M V++D + L +SI D L E
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAK 333
G+ +H +++GF + L SL YAK + A F +M +V+ WN MI G+ +
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
++++V+ M +P+ VT
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTC---------------------------------- 353
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
+++ + G+VE+ R +F + V W+AM+ GY + EAI+ + M+ +
Sbjct: 354 -ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 454 CPNDVTFIGLLTAC 467
P+ T +L++C
Sbjct: 413 KPDKTTLSVILSSC 426
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 199/421 (47%), Gaps = 29/421 (6%)
Query: 141 MYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP----DVFVQNGLV 196
++G + R G+ D + C LLD + C G R F DV+ N +
Sbjct: 28 IHGFIVRMGMKSDTYL-------CNRLLDLYIEC-GDGDYARKVFDEMSVRDVYSWNAFL 79
Query: 197 AMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWI 256
K G++G A VFDG+ +R VVSW ++IS + G +AL ++ +M
Sbjct: 80 TFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139
Query: 257 ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI-VARSFFDQ 315
L S++ A V D G HG +K G + + +L + YAKCG ++ F+
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA-ALASAQVGSLKL 374
+ + + + A+I G A+ EAV +FR M + ++ DSV + + ++++ + G L
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 375 AQWMDDYVSKS--------EYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
++ + + K + D+ +N +L+++YAK ++ A ++F E +V+ W+
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
MI+G+G + +++ MR +G PN+VT I +L AC SG V G +F +
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-- 377
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHVTLG 543
+P ++ ++ + ++A +M +++P + +LS+C R + G
Sbjct: 378 --QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 544 E 544
+
Sbjct: 436 K 436
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 10/310 (3%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE-FSHPDVFLWNAIIRGYSRS 132
QIH +I + + N +++ L+ S + + +FD+ + D+ WN++I G+ +
Sbjct: 437 QIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 133 NLFRNTIEMYGLMRREGV-DPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
L + ++ M + V P+ +F VL +C+ L HG V++ G+ D FV
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFV 556
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
+ L MY KCG I AR FD + + V W +I GY NG EA+ L+ +M ++
Sbjct: 557 ETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE 616
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM-GFEDEPDLLISLTAFYAKCGQVIVAR 310
K D I VS++ A +E G + + ++ G E E D I + + G++ A
Sbjct: 617 KPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAE 676
Query: 311 SFFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
+ SS ++W ++S +G V L R + + ++ D + + L S
Sbjct: 677 KLAEATPYKSSSVLWEILLSSCRVHGD----VSLARRVAEKLMRLDPQSSAAYVLLSNTY 732
Query: 370 GSLKLAQWMD 379
SL+ QW D
Sbjct: 733 SSLR--QWDD 740
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 258 LVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK 317
L S++R Y D G+ +HG I++MG + + L L Y +CG AR FD+M
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 318 TSSVIMWNA-------------------------------MISGYAKNGHAEEAVDLFRE 346
V WNA MIS + G E+A+ +++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN 406
M+ P T+ S A ++V K+ +IFV AL+ MYAKCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 407 -VESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
V+ VF+ S+ + + ++A+I G + EA+ ++ M + GV + V +L+
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 5/223 (2%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
H Q H ++ SG + F+ T L + G I AR+ FD + +WN +I GY
Sbjct: 537 HGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYG 596
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE--LLDFRLSCLVHGQVIRYGFGPD 188
+ + +Y M G PDG TF VL AC+ L++ L L Q I +G P+
Sbjct: 597 HNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI-HGIEPE 655
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDR-TVVSWTSIISGYAQNGEALEALRLFNQMR 247
+ +V + G + A + + + + V W ++S +G+ A R+ ++
Sbjct: 656 LDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM 715
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP 290
D + A V + Y + + +L G + K P
Sbjct: 716 RLDPQ-SSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/452 (34%), Positives = 249/452 (55%), Gaps = 11/452 (2%)
Query: 176 VHGQVIRYGFGPDVFVQNGLV--AMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
+HGQ+ D F+ + LV + + ++ AR + +D T +W + GY+ +
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
+E++ ++++M+ +K + + +++A L GR + ++K GF+ + +
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVG 151
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK 353
+L Y C + AR FD+M +V+ WN++++ +NG + F EMI +
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 354 PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
PD T+ L SA G+L L + + V E + + TAL+DMYAK G +E AR+V
Sbjct: 212 PDETTM--VVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLV 269
Query: 414 FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSGL 472
F+R +K+V WSAMI+G +G EA+ L+ M +++ V PN VTF+G+L AC+H+GL
Sbjct: 270 FERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGL 329
Query: 473 VREGWELFHCMRGF-GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
V +G++ FH M I+P HY +VD+LGRAG L++AYDFI KM EP VW LL
Sbjct: 330 VDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLL 389
Query: 532 SACKIHRHVT---LGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
SAC IH +GE K+L L+P +G+ V ++N +A +R+W A VR +M+E
Sbjct: 390 SACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETK 449
Query: 589 LSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
+ K G S +E+ G F G PRS+ +
Sbjct: 450 MKKIAGESCLELGGSFHRFFSG--YDPRSEYV 479
Score = 176 bits (446), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 188/371 (50%), Gaps = 7/371 (1%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSS-NLGH-ICYARKLFDEFSHPDVFLWNAIIR 127
+HL QIH Q+ +S L+++ F+I++LV SS +L + +AR L S WN + R
Sbjct: 27 KHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSR 86
Query: 128 GYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP 187
GYS S+ +I +Y M+R G+ P+ TFP++LKAC L + +V+++GF
Sbjct: 87 GYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF 146
Query: 188 DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR 247
DV+V N L+ +Y C AR VFD + +R VVSW SI++ +NG+ F +M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
D +V ++ A G +L G+ +H ++ E L +L YAK G +
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALAS 366
AR F++M +V W+AMI G A+ G AEEA+ LF +M+ +++P+ VT A
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVN-TALIDMYAKCGNVESARIVFDRTS-EKDVIM 424
+ G + + K + ++ A++D+ + G + A + E D ++
Sbjct: 325 SHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV 384
Query: 425 WSAMIMGYGLH 435
W ++ +H
Sbjct: 385 WRTLLSACSIH 395
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 253/466 (54%), Gaps = 15/466 (3%)
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM----ARVVFDGLNDRTVVSWTSIISGYAQ 232
H I +G + + + L+ + N+ A +FD + + ++I ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 233 NGEALEALRLFNQM---RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG-FED 288
+ + LR F M D+ ++ ++ A G+ +H ++K G F
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+ + + Y + ++ AR FD++ V+ W+ +++GY + G E +++FREM+
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY-ASDIFVNTALIDMYAKCGNV 407
+ ++PD +V +A A AQVG+L +W+ ++V K + SD+FV TAL+DMYAKCG +
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCI 270
Query: 408 ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTA 466
E+A VF + + ++V W+A+I GY +G +A+ + R+ G+ P+ V +G+L A
Sbjct: 271 ETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAA 330
Query: 467 CNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVS 525
C H G + EG + M + I P++EHYSC+VDL+ RAG LD A + I KM ++P S
Sbjct: 331 CAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLAS 390
Query: 526 VWGALLSACKIHRHVTLGEYAAKKLFSLDPYNT----GHYVQLSNLYASSRLWDHVAHVR 581
VWGALL+ C+ H++V LGE A K L L+ N VQLSN+Y S + + VR
Sbjct: 391 VWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVR 450
Query: 582 VLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRL 627
++ ++G+ K G+SV+E++G + F GD SHP +I+ I L
Sbjct: 451 GMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 185/379 (48%), Gaps = 14/379 (3%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNL----GHICYARKLFDEFSHPDVFLWNAI 125
+ + H+ I+ GL N + I+KL+ +L H YA +FD P+ F+++ +
Sbjct: 25 KQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTM 84
Query: 126 IRGYSRSNLFRNTIEMYGLM---RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR 182
IR SRS+ + + LM E + P TF +++ AC + F + +H V++
Sbjct: 85 IRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVK 144
Query: 183 YG-FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
G F D VQ G++ +Y + + AR VFD + VV W +++GY + G E L
Sbjct: 145 NGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLE 204
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAF 299
+F +M ++ D ++ + + A V L QG+ +H + K + E D+ + +L
Sbjct: 205 VFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW-IESDVFVGTALVDM 263
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN-IKPDSVT 358
YAKCG + A F ++ +V W A+I GYA G+A++A+ + + IKPDSV
Sbjct: 264 YAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVV 323
Query: 359 VRSAALASAQVGSLKLAQWM-DDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
+ A A G L+ + M ++ ++ E + ++D+ + G ++ A + ++
Sbjct: 324 LLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM 383
Query: 418 SEKDVI-MWSAMIMGYGLH 435
K + +W A++ G H
Sbjct: 384 PMKPLASVWGALLNGCRTH 402
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 252/466 (54%), Gaps = 15/466 (3%)
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM----ARVVFDGLNDRTVVSWTSIISGYAQ 232
H I +G + + + L+ + N+ A +FD + + ++I ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 233 NGEALEALRLFNQM---RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG-FED 288
+ + LR F M D+ ++ ++ A G+ +H ++K G F
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+ + + Y + + AR FD++ V+ W+ +++GY + G E +++F+EM+
Sbjct: 151 DGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML 210
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY-ASDIFVNTALIDMYAKCGNV 407
R I+PD +V +A A AQVG+L +W+ ++V K + SD+FV TAL+DMYAKCG +
Sbjct: 211 VRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCI 270
Query: 408 ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN-LYHAMRQAGVCPNDVTFIGLLTA 466
E+A VF++ + ++V W+A+I GY +G +A L R+ G+ P+ V +G+L A
Sbjct: 271 ETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAA 330
Query: 467 CNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVS 525
C H G + EG + M +GI P++EHYSC+VDL+ RAG LD A D I KM ++P S
Sbjct: 331 CAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 526 VWGALLSACKIHRHVTLGEYAAKKLFSLDPYNT----GHYVQLSNLYASSRLWDHVAHVR 581
VWGALL+ C+ H++V LGE A + L L+ N VQLSN+Y S + VR
Sbjct: 391 VWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVR 450
Query: 582 VLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRL 627
++ ++G+ K G+S++E++G + F GD SHP +I+ I L
Sbjct: 451 GMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 26/385 (6%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNL----GHICYARKLFDEFSHPDVFLWNAI 125
+ + H+ I+ GL N + I+KL+ +L H YA +FD P+ F+++ +
Sbjct: 25 KQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTM 84
Query: 126 IRGYSRSNLFRNTIEMYGLM---RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIR 182
IR SRS+ + + LM E + P TF +++ AC + F + +H V++
Sbjct: 85 IRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK 144
Query: 183 YG-FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
G F D VQ G++ +Y + + AR VFD + VV W +++GY + G E L
Sbjct: 145 NGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLE 204
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAF 299
+F +M ++ D ++ + + A V L QG+ +H + K + E D+ + +L
Sbjct: 205 VFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW-IESDVFVGTALVDM 263
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN-IKPDSVT 358
YAKCG + A F+++ +V W A+I GYA G+A++A + + IKPDSV
Sbjct: 264 YAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVV 323
Query: 359 VRSAALASAQVGSLKLAQWMDD-------YVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+ A A G L+ + M + K E+ S ++D+ + G ++ A
Sbjct: 324 LLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS------CIVDLMCRAGRLDDAL 377
Query: 412 IVFDRTSEKDVI-MWSAMIMGYGLH 435
+ ++ K + +W A++ G H
Sbjct: 378 DLIEKMPMKPLASVWGALLNGCRTH 402
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 4/236 (1%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
ARK+FDE PDV W+ ++ GY R L +E++ M G++PD F+ L AC +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 167 LLDFRLSCLVHGQVIRYGF-GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
+ +H V + + DVFV LV MYAKCG I A VF+ L R V SW +
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 226 IISGYAQNGEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRS-LHGCIIK 283
+I GYA G A +A +++ D +K D + L+ ++ A LE+GR+ L +
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 284 MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI-MWNAMISGYAKNGHAE 338
G + + + + G++ A ++M + +W A+++G + + E
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 267/511 (52%), Gaps = 2/511 (0%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS 132
++H+ + S L + + T+L + + ARKLFD F VFLWN+IIR Y+++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
+ F + ++ + R PD FT+ + + +E D + +HG I G G D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
+ +V Y+K G I A +F + D + W +I GY G + + LFN M++ +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ +V++ D L S+H +K+ + + +L Y++C + A S
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F+ + ++ +++I+GY++ G+ +EA+ LF E+ KPD V V + A++
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ + YV + DI V +ALIDMY+KCG ++ A +F EK+++ ++++I+G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPR 491
GLHG A + + + G+ P+++TF LL C HSGL+ +G E+F M+ FGIEP+
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLF 551
EHY +V L+G AG L++A++F+M + + GALLS C++H + L E A+ +
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 552 SLDPYNTGHY-VQLSNLYASSRLWDHVAHVR 581
Y V LSN+YA WD V +R
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLR 535
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 266 bits (680), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 292/590 (49%), Gaps = 59/590 (10%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICY---ARKLFDEFS 115
+ ++I +R ++Q V K + +++G + G I + ARKLFDE
Sbjct: 74 WNTMISGYVKRREMNQARKLFDVMP-KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP 132
Query: 116 HPDVFLWNAIIRGYSRSN-------LF-----RNTIE----MYGLMRREGVD-------- 151
D F WN +I GY+++ LF RN + + G + VD
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 152 -PDGFTFPYVLKACTELLDFRLS--CLVHGQVIRYGFGPD--VFVQNGLVAMYAKCGNIG 206
P + P + + RLS V GQ G + V+ N L+ Y + G +
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVE 252
Query: 207 MARVVFDGLND---------------RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
AR +FD + D + VVSW S+I Y + G+ + A LF+QM++ D
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT 312
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
I+ +++ Y V +E +L +M D + ++ YA G V +AR
Sbjct: 313 ----ISWNTMIDGYVHVSRMEDAFALFS---EMPNRDAHSWNMMVSG-YASVGNVELARH 364
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
+F++ + WN++I+ Y KN +EAVDLF M KPD T+ S AS + +
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVN 424
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS-EKDVIMWSAMIM 430
L+L M V K+ D+ V+ ALI MY++CG + +R +FD +++VI W+AMI
Sbjct: 425 LRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIG 483
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIE 489
GY HG EA+NL+ +M+ G+ P+ +TF+ +L AC H+GLV E F M + IE
Sbjct: 484 GYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIE 543
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
P+ EHYS +V++ G ++A I M EP +VWGALL AC+I+ +V L AA+
Sbjct: 544 PQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEA 603
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIE 599
+ L+P ++ YV L N+YA LWD + VR+ M K + K+ G S ++
Sbjct: 604 MSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 202/505 (40%), Gaps = 110/505 (21%)
Query: 88 GFLIT-KLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLM- 145
GF T K +N G+I AR +F++ + WN +I GY + +++ +M
Sbjct: 39 GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP 98
Query: 146 RREGVDPDGFTFPYV-------LKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM 198
+R+ V + YV L+ +L D S D F N +++
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPS-------------RDSFSWNTMISG 145
Query: 199 YAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD-------- 250
YAK IG A ++F+ + +R VSW+++I+G+ QNGE A+ LF +M D
Sbjct: 146 YAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALV 205
Query: 251 ---------VKLDWI-----ALVS-----------IVRAYGDVDDLEQGRSL-------- 277
+ W+ +LVS ++ YG +E R L
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLC 265
Query: 278 ---HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
HG + F S+ Y K G V+ AR FDQMK I WN MI GY
Sbjct: 266 GDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHV 325
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN 394
E+A LF EM R+ W
Sbjct: 326 SRMEDAFALFSEMPNRDAH----------------------SW----------------- 346
Query: 395 TALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC 454
++ YA GNVE AR F++T EK + W+++I Y + EA++L+ M G
Sbjct: 347 NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEK 406
Query: 455 PNDVTFIGLLTACNHSGLV--REGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
P+ T LL+A +GLV R G ++ H + + P ++ ++ + R G + ++
Sbjct: 407 PDPHTLTSLLSAS--TGLVNLRLGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESR 463
Query: 513 DFIMKMSIEPGVSVWGALLSACKIH 537
+M ++ V W A++ H
Sbjct: 464 RIFDEMKLKREVITWNAMIGGYAFH 488
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 136/340 (40%), Gaps = 98/340 (28%)
Query: 168 LDFRLSCLVHGQVIRYGF---GPDVFVQ---------NGLVAMYAKCGNIGMARVVFDGL 215
L FR + Q+IR G+ D+F + N +++ Y K + AR +FD +
Sbjct: 38 LGFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM 97
Query: 216 NDRTVVSWTSIISGYAQNGEAL---EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
R VV+W ++ISGY G EA +LF++M + D W ++S
Sbjct: 98 PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRD-SFSWNTMIS------------ 144
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
YAK ++ A F++M + + W+AMI+G+
Sbjct: 145 --------------------------GYAKNRRIGEALLLFEKMPERNAVSWSAMITGFC 178
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTV---------RSAALASAQVGSL----------- 372
+NG + AV LFR+M ++ P V AA Q GSL
Sbjct: 179 QNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAY 238
Query: 373 -------------KLAQWMDDYVS-----------KSEYASDIFVNTALIDMYAKCGNVE 408
+ A+ + D + + + ++ ++I Y K G+V
Sbjct: 239 NTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVV 298
Query: 409 SARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
SAR++FD+ ++D I W+ MI GY + +A L+ M
Sbjct: 299 SARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 276/538 (51%), Gaps = 29/538 (5%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE--FSHPDVFLWNAIIRGYSR 131
Q+H+ +I +G ++ L+ N + A +F+E + D +N +I G +
Sbjct: 210 QVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAG 269
Query: 132 SNLFR--NTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL-----VHGQVIRYG 184
F+ ++ ++ M + P TF V+ +C SC VHG I+ G
Sbjct: 270 ---FKRDESLLVFRKMLEASLRPTDLTFVSVMGSC--------SCAAMGHQVHGLAIKTG 318
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
+ V N + MY+ + G A VF+ L ++ +V+W ++IS Y Q A+ ++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M VK D S++ D+D LE + CIIK G + ++ +L + Y+K G
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK--PDSVTVRSA 362
Q+ A F++ ++I WNA+ISG+ NG E ++ F ++ ++ PD+ T+ +
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 363 ALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV 422
SL L YV + + + ALI+MY++CG ++++ VF++ SEKDV
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDV 555
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACNHSGLVREGWELFH 481
+ W+++I Y HG+G A+N Y M+ G V P+ TF +L+AC+H+GLV EG E+F+
Sbjct: 556 VSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFN 615
Query: 482 CMRGFGIEPRN-EHYSCVVDLLGRAGYLDQAYDF--IMKMSIEPGVSVWGALLSACKIHR 538
M F RN +H+SC+VDLLGRAG+LD+A I + +I V VW AL SAC H
Sbjct: 616 SMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Query: 539 HVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
+ LG+ AK L + + YVQLSN+YA + +W R + G K G S
Sbjct: 676 DLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 227/490 (46%), Gaps = 24/490 (4%)
Query: 54 NLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE 113
L S Y L + ++ K+ D+I + S T L++ S LG I YA ++FD+
Sbjct: 97 TLLSLYERLGNLASLKKKFDEIDEPDVYSW--------TTLLSASFKLGDIEYAFEVFDK 148
Query: 114 F-SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT-ELLDFR 171
DV +WNA+I G S ++E++ M + GV D F F +L C LDF
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFG 208
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN--DRTVVSWTSIISG 229
VH VI+ GF V N L+ MY C + A +VF+ + R V++ +I G
Sbjct: 209 KQ--VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
A + E+L +F +M ++ + VS++ G G +HG IK G+E
Sbjct: 267 LA-GFKRDESLLVFRKMLEASLRPTDLTFVSVM---GSCSCAAMGHQVHGLAIKTGYEKY 322
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
+ + Y+ A F+ ++ ++ WN MIS Y + + A+ +++ M
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
+KPD T S S + L++ Q + K +S I ++ ALI Y+K G +E
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMVQAC---IIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV--CPNDVTFIGLLTAC 467
A ++F+R+ K++I W+A+I G+ +G +E + + + ++ V P+ T LL+ C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 468 NHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVW 527
+ + G + + G + ++++ + G + + + +MS E V W
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSW 558
Query: 528 GALLSACKIH 537
+L+SA H
Sbjct: 559 NSLISAYSRH 568
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 197/445 (44%), Gaps = 44/445 (9%)
Query: 123 NAIIRGYSRSNLFRNTIEMYGLMRR-EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
N + G +RS RN ++++ + R + PD ++ + L D VH I
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
R G V N L+++Y + GN+ + FD +++ V SWT+++S + G+ A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYG-------------------------------DVDD 270
+F++M D W A+++ + G D
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGS 204
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS--SVIMWNAMI 328
L+ G+ +H +IK GF ++ +L Y C V+ A F++ + + +N +I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
G A +E++ +FR+M+ +++P +T S + S + + + K+ Y
Sbjct: 265 DGLA-GFKRDESLLVFRKMLEASLRPTDLTFVS-VMGSCSCAA--MGHQVHGLAIKTGYE 320
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
V+ A + MY+ + +A VF+ EKD++ W+ MI Y G A+++Y M
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFH-CMRGFGIEPRNEHYSCVVDLLGRAGY 507
GV P++ TF LL + L + E+ C+ FG+ + E + ++ + G
Sbjct: 381 HIIGVKPDEFTFGSLLA----TSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQ 436
Query: 508 LDQAYDFIMKMSIEPGVSVWGALLS 532
+++A D + + S+ + W A++S
Sbjct: 437 IEKA-DLLFERSLRKNLISWNAIIS 460
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 8/219 (3%)
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
+++++ N ++G ++G A+ LF ++ ++PD +V A + +
Sbjct: 18 STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGG 77
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHG 436
+ Y +S V+ L+ +Y + GN+ S + FD E DV W+ ++ G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 437 QGWEAINLYHAMRQAGVCPNDVT-FIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY 495
A ++ M + +DV + ++T C SG ELF M G+ +
Sbjct: 138 DIEYAFEVFDKMPE----RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGF 193
Query: 496 SCVVDLL--GRAGYLDQAYDFIMKMSIEPGVSVWGALLS 532
+ ++ + G + Q + ++K SV AL++
Sbjct: 194 ATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALIT 232
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 234/457 (51%), Gaps = 34/457 (7%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
+H ++R+ + +++ N A VF + + V+ + ++I Y+ G
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
LE+L F+ M++ + D ++++ + DL G+ +HG +I+ GF + I
Sbjct: 83 PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG 142
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAE----------------- 338
+ Y G++ A+ FD+M +V++WN MI G+ +G E
Sbjct: 143 VVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSW 202
Query: 339 --------------EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
EA++LF EMI + PD TV + SA +G L +W+
Sbjct: 203 NSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAES 262
Query: 385 SEYASD-IFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAIN 443
S D I V AL+D Y K G++E+A +F + ++V+ W+ +I G ++G+G I+
Sbjct: 263 SGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGID 322
Query: 444 LYHAMRQAG-VCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDL 501
L+ AM + G V PN+ TF+G+L C+++G V G ELF M F +E R EHY +VDL
Sbjct: 323 LFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDL 382
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHY 561
+ R+G + +A+ F+ M + ++WG+LLSAC+ H V L E AA +L ++P N+G+Y
Sbjct: 383 MSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNY 442
Query: 562 VQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
V LSNLYA W V VR LM++ L K G S I
Sbjct: 443 VLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 193/415 (46%), Gaps = 45/415 (10%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
L+ + L +IH L+ L + L+ ++ +L + YA ++F +P+V +
Sbjct: 10 LLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLV 69
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
+NA+I+ YS ++ + M+ G+ D +T+ +LK+C+ L D R VHG++I
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALR 241
R GF ++ G+V +Y G +G A+ VFD +++R VV W +I G+ +G+ L
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLH 189
Query: 242 LFNQMRNTDVKLDWIALVSIVRAYG-----------------DVDD-------------- 270
LF QM + + W +++S + G D D+
Sbjct: 190 LFKQMSERSI-VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLG 248
Query: 271 -LEQGRSLHGCIIKMG-FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
L+ G+ +H G F+D + +L FY K G + A + F +M+ +V+ WN +I
Sbjct: 249 VLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI 308
Query: 329 SGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLKLAQ-----WMDDYV 382
SG A NG E +DLF MI + P+ T + G ++ + M+ +
Sbjct: 309 SGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF- 367
Query: 383 SKSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSEKDVIMWSAMIMGYGLHG 436
K E ++ + A++D+ ++ G + E+ + + + + MW +++ HG
Sbjct: 368 -KLEARTEHY--GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/458 (33%), Positives = 237/458 (51%), Gaps = 36/458 (7%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ--GRS 276
T VSWTS I+ +NG EA + F+ M V+ + I ++++ GD + G
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 277 LHGCIIKMGF-------------------------------EDEPDLLI-SLTAFYAKCG 304
LHG K+G ED+ + ++ Y + G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
QV A FD+M +I W AMI+G+ K G+ EEA+ FREM +KPD V + +A
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIM 424
A +G+L W+ YV ++ +++ V+ +LID+Y +CG VE AR VF ++ V+
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 425 WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR 484
W+++I+G+ +G E++ + M++ G P+ VTF G LTAC+H GLV EG F M+
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 485 -GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH-RHVTL 542
+ I PR EHY C+VDL RAG L+ A + M ++P V G+LL+AC H ++ L
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 543 GEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING 602
E K L L+ + +YV LSN+YA+ W+ + +R M+ GL K G+S IEI+
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 603 KLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHT 640
+ VF GD +H + I ++ + L+ G V T
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 44/356 (12%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR--LSCLVHGQ 179
W + I +R+ + + M GV+P+ TF +L C + L L+HG
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 180 VIRYGFGPD-VFVQNGLVAMYAKCGNIGMARVVFDGLND--------------------- 217
+ G + V V ++ MY+K G AR+VFD + D
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 218 ----------RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
R ++SWT++I+G+ + G EAL F +M+ + VK D++A+++ + A +
Sbjct: 159 AAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN 218
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
+ L G +H ++ F++ + SL Y +CG V AR F M+ +V+ WN++
Sbjct: 219 LGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSV 278
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG----SLKLAQWMD-DYV 382
I G+A NG+A E++ FR+M + KPD+VT A A + VG L+ Q M DY
Sbjct: 279 IVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY- 337
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
+ I L+D+Y++ G +E A ++V + + ++ +++ HG
Sbjct: 338 ---RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 135/329 (41%), Gaps = 43/329 (13%)
Query: 87 NGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
N +++G G + A K+FD+ D+ W A+I G+ + + + M+
Sbjct: 139 NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQ 198
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
GV PD L ACT L VH V+ F +V V N L+ +Y +CG +
Sbjct: 199 ISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVE 258
Query: 207 MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYG 266
AR VF + RTVVSW S+I G+A NG A E+L F +M+ K D + + A
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 267 DVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNA 326
V +E+G + KC I R + +
Sbjct: 319 HVGLVEEGLRYFQIM--------------------KCDYRISPR----------IEHYGC 348
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG-----SLKLAQWMDDY 381
++ Y++ G E+A+ L + M +KP+ V + S A + G + +L + + D
Sbjct: 349 LVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDL 405
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESA 410
KS I N MYA G E A
Sbjct: 406 NVKSHSNYVILSN-----MYAADGKWEGA 429
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 35/252 (13%)
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS--AALASAQVGS 371
+Q + + + W + I+ +NG EA F +M ++P+ +T + + GS
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 372 LKLAQWMDDYVSKSEYASD-IFVNTALIDMYAKCGNVESARIV----------------- 413
L + Y K + + V TA+I MY+K G + AR+V
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 414 --------------FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
FD+ E+D+I W+AMI G+ G EA+ + M+ +GV P+ V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 460 FIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS 519
I L AC + G + G + + + + ++DL R G ++ A M
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 520 IEPGVSVWGALL 531
VS W +++
Sbjct: 269 KRTVVS-WNSVI 279
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 210/377 (55%), Gaps = 3/377 (0%)
Query: 223 WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
W +I+ Y ++ L+A++++ M + V D +L +++A + D G+ LH +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 283 KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVD 342
++GF + Y K G+ AR FD+ + WNA+I G G A EAV+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 343 LFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV--SKSEYASDIFVNTALIDM 400
+F +M ++PD T+ S + +G L LA + V +K+E SDI + +LIDM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
Y KCG ++ A +F+ +++V+ WS+MI+GY +G EA+ + MR+ GV PN +TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 461 IGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS 519
+G+L+AC H GLV EG F M+ F +EP HY C+VDLL R G L +A + +M
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 520 IEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAH 579
++P V VWG L+ C+ V + E+ A + L+P+N G YV L+N+YA +W V
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 580 VRVLMREKGLSKDLGYS 596
VR LM+ K ++K YS
Sbjct: 445 VRKLMKTKKVAKIPAYS 461
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 190/355 (53%), Gaps = 18/355 (5%)
Query: 90 LITKLVNGSSNLGHI------CYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
L+ L++ ++L + + ++ D++ P FLWN I+R Y R + I++Y
Sbjct: 49 LLATLLSNCTSLARVRRIHGDIFRSRILDQY--PIAFLWNNIMRSYIRHESPLDAIQVYL 106
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
M R V PD ++ P V+KA ++ DF L +H +R GF D F ++G + +Y K G
Sbjct: 107 GMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAG 166
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
AR VFD +R + SW +II G G A EA+ +F M+ + ++ D +VS+
Sbjct: 167 EFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTA 226
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSV 321
+ G + DL LH C+++ E++ D+++ SL Y KCG++ +A F++M+ +V
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV 286
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+ W++MI GYA NG+ EA++ FR+M ++P+ +T A G L + Y
Sbjct: 287 VSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG---LVEEGKTY 343
Query: 382 VS--KSEYASDIFVN--TALIDMYAKCGNVESARIVFDRTSEK-DVIMWSAMIMG 431
+ KSE+ + ++ ++D+ ++ G ++ A+ V + K +V++W ++ G
Sbjct: 344 FAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
++H+ + G + F + + G ARK+FDE + WNAII G + +
Sbjct: 138 ELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGF--GPDVFV 191
+EM+ M+R G++PD FT V +C L D L+ +H V++ D+ +
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N L+ MY KCG + +A +F+ + R VVSW+S+I GYA NG LEAL F QMR V
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL--LISLTAFYAKCGQVIVA 309
+ + I V ++ A +E+G++ + ++K FE EP L + ++ GQ+ A
Sbjct: 318 RPNKITFVGVLSACVHGGLVEEGKT-YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEA 376
Query: 310 RSFFDQMK-TSSVIMWNAMISGYAKNGHAEEA 340
+ ++M +V++W ++ G K G E A
Sbjct: 377 KKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 104/211 (49%), Gaps = 3/211 (1%)
Query: 323 MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
+WN ++ Y ++ +A+ ++ M+ + PD ++ A+ Q+ L + +
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ + D F + I +Y K G E+AR VFD E+ + W+A+I G G+ EA+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE--HYSCVVD 500
++ M+++G+ P+D T + + +C G + ++L C+ E +++ + ++D
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 501 LLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
+ G+ G +D A +M + V W +++
Sbjct: 264 MYGKCGRMDLASHIFEEMR-QRNVVSWSSMI 293
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/522 (30%), Positives = 259/522 (49%), Gaps = 38/522 (7%)
Query: 90 LITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRS-------NLFRNTIEMY 142
+I +++ G A LF +H D+ WN++I +S++ NLF+ + Y
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 143 GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
+ F+ VL T SC +I FG V K
Sbjct: 491 SCSK--------FSLSTVLAILT-------SCDSSDSLI---FGKSVH------CWLQKL 526
Query: 203 GNIGMARVVFDGLND-RTVVSWTSIISGYAQNGEALEALRLFNQM-RNTDVKLDWIALVS 260
G++ A + + +++ R + SW S+ISG A +G LE+LR F M R ++ D I L+
Sbjct: 527 GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLG 586
Query: 261 IVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSS 320
+ A G++ + QGR HG IK E + L +L Y +C + A F + +
Sbjct: 587 TISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPN 646
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDD 380
+ WN +IS ++N E LFR + ++P+ +T AS Q+GS
Sbjct: 647 LCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHC 703
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
++ + + ++ FV+ AL+DMY+ CG +E+ VF + + W+++I +G HG G +
Sbjct: 704 HLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEK 763
Query: 441 AINLYHAMRQ-AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCV 498
A+ L+ + + + PN +FI LL+AC+HSG + EG + M FG++P EH +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 499 VDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNT 558
VD+LGRAG L +AY+FI + VWGALLSAC H LG+ A+ LF ++P N
Sbjct: 824 VDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNA 883
Query: 559 GHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
+Y+ L+N Y W+ +R ++ + L K GYSVI++
Sbjct: 884 SYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 230/476 (48%), Gaps = 36/476 (7%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R +H I +GL + L L+N + ++ A +F H D+ WN I+
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD- 188
+ R +++ + M G + D TF V+ AC+ + + L +HG VI+ G+ P+
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 189 -VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR 247
V V N +++MY+KCG+ A VF+ L R V+S +I++G+A NG EA + NQM+
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 248 NTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP-DLLISLTAFYAKCGQ 305
+ D ++ D +VSI GD+ +GR++HG ++M + +++ S+ Y KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAAL 364
A F ++ WN+MIS +++NG +A +LF+E+++ + S++ A L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMY-AKCGNVESARIVFDRTSE-KDV 422
S +SD + + + K G++ SA + + SE +D+
Sbjct: 505 TSCD-------------------SSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDL 545
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND-VTFIGLLTACNHSGLVREGWELFH 481
W+++I G G E++ + AM + G +D +T +G ++A + GLV +G
Sbjct: 546 TSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG----R 601
Query: 482 CMRGFGI----EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
C G I E + + ++ + GR ++ A +S +P + W ++SA
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLIS-DPNLCSWNCVISA 656
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 220/471 (46%), Gaps = 25/471 (5%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H + GL + +KL+ G + + LFDE DV +WN++I +++
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ + ++ M +G + D T A + L R ++H I G D + N
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNA 228
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
L+ +YAK N+ A VF + R +VSW +I++ NG ++L+ F M + + D
Sbjct: 229 LMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEAD 288
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSF 312
+ ++ A +++L G SLHG +IK G+ E + + S+ + Y+KCG A +
Sbjct: 289 TVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETV 348
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGS 371
F+++ VI NA+++G+A NG EEA + +M + + I+PD TV S +
Sbjct: 349 FEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 372 LKLAQWMDDYVSKSEYASDIF-VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
+ + + Y + E S V ++IDMY KCG A ++F T+ +D++ W++MI
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468
Query: 431 GYGLHGQGWEAINLYHAMRQAGVCP--NDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
+ +G +A NL+ + C + T + +LT+C+ S + G + HC
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV-HCW----- 522
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRH 539
L + G L A+ + MS ++ W +++S C H
Sbjct: 523 -------------LQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 3/230 (1%)
Query: 242 LFNQM---RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
LF+++ N ++ ++ L ++R++ + E RS+H +K G + L
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
FY + G+++ + FD++K VI+WN+MI+ +NG AV LF EMI + + DS T
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS 418
+ AA A + + + + ++ D + AL+++YAK N+ SA VF
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 419 EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACN 468
+D++ W+ ++ +G +++ + +M +G + VTF +++AC+
Sbjct: 251 HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 246/496 (49%), Gaps = 42/496 (8%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H GL ++ L++ G+ A ++F + D+ WNAII ++S
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSC--LVHGQVIRYGFGPDVFV 191
++++ M G P+ T+ VL + L+ LSC +HG +I+ G + +
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVL-GVSSLVQL-LSCGRQIHGMLIKNGCETGIVL 353
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N L+ YAKCGN+ +R+ FD + D+ +V W +++SGYA N + L LF QM
Sbjct: 354 GNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGF 412
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC-------- 303
+ + +++ V +L+Q LH I++MG+ED +L SL YAK
Sbjct: 413 RPTEYTFSTALKSCC-VTELQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 304 ------------------------GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
GQ + ++ + WN I+ +++ + EE
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEE 528
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA-SDIFVNTALI 398
++LF+ M+ NI+PD T S +++ L L + ++K++++ +D FV LI
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 399 DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
DMY KCG++ S VF+ T EK++I W+A+I G+HG G EA+ + G P+ V
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRV 648
Query: 459 TFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
+FI +LTAC H G+V+EG LF M+ +G+EP +HY C VDLL R GYL +A I +M
Sbjct: 649 SFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Query: 519 SIEPGVSVWGALLSAC 534
VW L C
Sbjct: 709 PFPADAPVWRTFLDGC 724
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 11/398 (2%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
++ +++ LG + A K+FD+ + +N II+GYS+ ++ MR
Sbjct: 50 YVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYF 109
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYG-FGPDVFVQNGLVAMYAKCGNIGM 207
G P+ T +L + LD R +HG ++YG F D FV L+ +Y + + M
Sbjct: 110 GYLPNQSTVSGLLSCAS--LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
A VF+ + +++ +W ++S G E + F ++ L + + +++
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
V DL+ + LH K G + E ++ SL + Y KCG +A F + ++ WNA+
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
I AK+ + +A+ LF M P+ T S S+ V L + + + K+
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA 447
+ I + ALID YAKCGN+E +R+ FD +K+++ W+A++ GY + G ++L+
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQ 406
Query: 448 MRQAGVCPNDVTFIGLLTACN-------HSGLVREGWE 478
M Q G P + TF L +C HS +VR G+E
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE 444
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 159/355 (44%), Gaps = 22/355 (6%)
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMR- 247
V+V N ++++Y K G + +A VFD + +R VS+ +II GY++ G+ +A +F++MR
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 248 -----NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG-FEDEPDLLISLTAFYA 301
N ++ S+ D+ G LHG +K G F + + L Y
Sbjct: 109 FGYLPNQSTVSGLLSCASL--------DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYG 160
Query: 302 KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
+ + +A F+ M S+ WN M+S G +E + FRE++ +
Sbjct: 161 RLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLG 220
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+ V L +++ + +K +I V +LI Y KCGN A +F D
Sbjct: 221 VLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWD 280
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
++ W+A+I +A+ L+ +M + G PN T++ +L + L+ G ++
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSA 533
+ G E + ++D + G L+ + +D+I + + W ALLS
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSG 391
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 109 KLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL 168
KL PD WN I SRS+ IE++ M + + PD +TF +L C++L
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 169 DFRLSCLVHGQVIRYGFG-PDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSII 227
D L +HG + + F D FV N L+ MY KCG+I VF+ ++ +++WT++I
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALI 619
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
S +G EAL F + + K D ++ +SI+ A +++G L + G E
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGHAEE 339
E D A+ G + A +M + +W + G N AEE
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC--NRFAEE 730
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 225/400 (56%), Gaps = 23/400 (5%)
Query: 227 ISGYAQNGEALEALRLF-NQMRNTDVKLDWIAL-----VSIVRAYGDVDDLEQGRSLHGC 280
+ Y ++GE ++AL F ++ R + +D ++ VS + +D GR +H
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD----GRQIHAL 90
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM-KTSSVIMWNAMISGYAKNGHAEE 339
+ K+GF + SL FY+ G V AR FD+ + ++++W AMIS Y +N ++ E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ--WMDDYVSKSEYASDIFVNTAL 397
A++LF+ M I+ D V V A A A +G++++ + + K A D+ + +L
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG----- 452
++MY K G E AR +FD + KDV +++MI GY L+GQ E++ L+ M+
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 453 -VCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
+ PNDVTFIG+L AC+HSGLV EG F M + ++PR H+ C+VDL R+G+L
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 511 AYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYAS 570
A++FI +M I+P +W LL AC +H +V LGE +++F LD + G YV LSN+YAS
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 571 SRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVG 610
+WD + +R +R++ + G S IE+ + F G
Sbjct: 391 KGMWDEKSKMRDRVRKRRMP---GKSWIELGSIINEFVSG 427
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 16/300 (5%)
Query: 55 LDSF---YASLIDNSTHKRHLD--QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK 109
+DSF +A + ++ LD QIH + G + T LV S++G + YAR+
Sbjct: 62 VDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQ 121
Query: 110 LFDEFSHP-DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL 168
+FDE ++ LW A+I Y+ + IE++ M E ++ DG L AC +L
Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLG 181
Query: 169 DFRLSCLVHGQVIRYG--FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
++ ++ + I+ D+ ++N L+ MY K G AR +FD + V ++TS+
Sbjct: 182 AVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSM 241
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDW------IALVSIVRAYGDVDDLEQG-RSLHG 279
I GYA NG+A E+L LF +M+ D D + + ++ A +E+G R
Sbjct: 242 IFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKS 301
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK-TSSVIMWNAMISGYAKNGHAE 338
I+ + + + + G + A F +QM + ++W ++ + +G+ E
Sbjct: 302 MIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 179/665 (26%), Positives = 295/665 (44%), Gaps = 108/665 (16%)
Query: 76 HNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN-- 133
H + I SG +LVN S G + AR +FDE +V+ WNA+I Y + N
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 134 -----LFRN--------------------------TIEMYGLMRREGVDP---DGFTFPY 159
LF + IEM+G M R+ D D FT
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDG----- 214
++K +L + +HG +++ G F + L+ MY+KCG +F+G
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 215 -------------------------------LNDRTVVSWTSIISGYAQNGEALEALRLF 243
LND +SW ++I+GYAQNG EAL++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELND--TISWNTLIAGYAQNGYEEEALKMA 248
Query: 244 NQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC 303
M +K D + +++ + L+ G+ +H ++K G + + Y KC
Sbjct: 249 VSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKC 308
Query: 304 -------------------------------GQVIVARSFFDQMKTSSVIMWNAMISGYA 332
G+++ A+ FD + ++++W AM GY
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 333 KNGHAEEAVDLFREMITRNIK-PDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDI 391
+ ++L R I PDS+ + S A + ++ + + + ++ D
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDK 428
Query: 392 FVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
+ TA +DMY+KCGNVE A +FD + E+D +M++AMI G HG ++ + M +
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
G P+++TF+ LL+AC H GLV EG + F M + I P HY+C++DL G+A LD+
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 511 AYDFIMKM-SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYA 569
A + + + +E + GA L+AC +++ L + +KL ++ N Y+Q++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 570 SSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLER 629
SS WD + +R MR K L G S I+ + +F D SH ++ IY + + +
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTK 668
Query: 630 RLKEI 634
L EI
Sbjct: 669 DLSEI 673
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 5/197 (2%)
Query: 25 TCLFLKFIKHLCSSSVLNLGHVVSLDHGLNLDSF-YASLIDNSTHKRHLD---QIHNQLI 80
T +FL ++ SVL L + DS S++ + + +++ +IH +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 81 VSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIE 140
+G+ + L+T V+ S G++ YA ++FD D ++NA+I G + + +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 141 MYGLMRREGVDPDGFTFPYVLKACTEL-LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMY 199
+ M G PD TF +L AC L + Y P+ ++ +Y
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLY 540
Query: 200 AKCGNIGMARVVFDGLN 216
K + A + +G++
Sbjct: 541 GKAYRLDKAIELMEGID 557
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/530 (29%), Positives = 278/530 (52%), Gaps = 13/530 (2%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++I G N F+ + LV + L + A KLFDE ++ + N ++R + ++
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG-PDVFVQ 192
+ E+Y M EGV +G T+ Y+++ C+ +H V++ G+ ++FV
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVA 252
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N LV Y+ CG++ + F+ + ++ V+SW SI+S A G L++L LF++M+ +
Sbjct: 253 NVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVAR 310
+S + D++ G+ +H ++KMGF D L + +L Y KC + +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF-DVSSLHVQSALIDMYGKCNGIENSA 371
Query: 311 SFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSA--ALASAQ 368
+ + ++ N++++ G ++ +++F MI D VT+ + AL+ +
Sbjct: 372 LLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSL 431
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
SL + KS YA+D+ V+ +LID Y K G E +R VFD ++ +++
Sbjct: 432 PESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSI 491
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FG 487
I GY +G G + + + M + + P++VT + +L+ C+HSGLV EG +F + +G
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYG 551
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAA 547
I P + Y+C+VDLLGRAG +++A +++ + W +LL +C+IHR+ T+G AA
Sbjct: 552 ISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAA 611
Query: 548 KKLFSLDPYNTGHYVQLSNLYAS------SRLWDHVAHVRVLMREKGLSK 591
+ L +L+P N Y+Q+S Y SR +A R LMRE G S
Sbjct: 612 EVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSS 661
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 4/368 (1%)
Query: 102 GHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVL 161
G++ A + FDE S DV +N +I G SR IE+Y M G+ TFP VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
C++ L R VH +VI GFG ++FV++ LV +YA + +A +FD + DR +
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLA 179
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
++ + Q GE+ ++ +M V + + ++R + +G+ LH +
Sbjct: 180 VCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLV 239
Query: 282 IKMGFEDEPDLLIS--LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEE 339
+K G+ + ++ ++ L +Y+ CG + + F+ + VI WN+++S A G +
Sbjct: 240 VKSGW-NISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY-ASDIFVNTALI 398
++DLF +M +P S ++ ++ + + YV K + S + V +ALI
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALI 358
Query: 399 DMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
DMY KC +E++ +++ ++ ++++ G + I ++ M G ++V
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 459 TFIGLLTA 466
T +L A
Sbjct: 419 TLSTVLKA 426
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 156/326 (47%), Gaps = 4/326 (1%)
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
V+ N + K GN+ A FD ++ R VV++ +ISG ++ G +L A+ L+ +M +
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
++ S++ D +G +H +I +GF + +L YA V V
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
A FD+M ++ + N ++ + + G ++ +++ M + + +T +
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 369 VGSLKLAQWMDDYVSKSEY-ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
+ + + V KS + S+IFV L+D Y+ CG++ + F+ EKDVI W++
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC-MRGF 486
++ +G ++++L+ M+ G P+ F+ L C+ + ++ G ++ HC +
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQI-HCYVLKM 344
Query: 487 GIEPRNEHY-SCVVDLLGRAGYLDQA 511
G + + H S ++D+ G+ ++ +
Sbjct: 345 GFDVSSLHVQSALIDMYGKCNGIENS 370
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 241/464 (51%), Gaps = 10/464 (2%)
Query: 54 NLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDE 113
+L + + S S ++ L + H I +GL ++ FL T LV+ G + AR++FDE
Sbjct: 216 SLSNVFKSFAGASALRQGL-KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 114 FSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR----REGVDPDGFTFPYVLKACTELLD 169
D+ +W A+I G + + + E GL R E + P+ +L ++
Sbjct: 275 IVERDIVVWGAMIAGLAHN---KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKA 331
Query: 170 FRLSCLVHGQVIR-YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIIS 228
+L VH V++ + FV +GL+ +Y KCG++ R VF G R +SWT+++S
Sbjct: 332 LKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMS 391
Query: 229 GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
GYA NG +ALR M+ + D + + +++ ++ ++QG+ +H +K F
Sbjct: 392 GYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP 451
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
L+ SL Y+KCG FD+++ +V W AMI Y +N +++FR M+
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+PDSVT+ + + +LKL + + ++ K E+ S FV+ +I MY KCG++
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 409 SARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACN 468
SA FD + K + W+A+I YG + +AIN + M G PN TF +L+ C+
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 469 HSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
+G V E + F+ M R + ++P EHYS V++LL R G +++A
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 245/482 (50%), Gaps = 8/482 (1%)
Query: 59 YASLIDNSTHKR---HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
+++L++ ++ H Q+H + ++GL+ N FL TKLV+ + G + A+K+FDE +
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 116 HPDVFLWNAIIRG--YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
+V+ WNA++RG S +++ + + MR GVD + ++ V K+ R
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQN 233
H I+ G VF++ LV MY KCG +G+AR VFD + +R +V W ++I+G A N
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 234 GEALEALRLFNQMRNTD-VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK-MGFEDEPD 291
EAL LF M + + + + + L +I+ GDV L+ G+ +H ++K + ++P
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF 353
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
+ L Y KCG + R F K + I W A++SGYA NG ++A+ M
Sbjct: 354 VHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEG 413
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+PD VT+ + A++ ++K + + Y K+ + ++ + T+L+ MY+KCG E
Sbjct: 414 FRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPI 473
Query: 412 IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSG 471
+FDR +++V W+AMI Y + I ++ M + P+ VT +LT C+
Sbjct: 474 RLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLK 533
Query: 472 LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALL 531
++ G EL + E + ++ + G+ G L A +F G W A++
Sbjct: 534 ALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSA-NFSFDAVAVKGSLTWTAII 592
Query: 532 SA 533
A
Sbjct: 593 EA 594
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 190/366 (51%), Gaps = 15/366 (4%)
Query: 126 IRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRY-- 183
I+ ++R N + + + + G+ + TF +L+AC R L+HG+ +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACV-----RRKSLLHGKQVHVHI 137
Query: 184 ---GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA--LE 238
G + F++ LV MY CG++ A+ VFD V SW +++ G +G+ +
Sbjct: 138 RINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQD 197
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
L F +MR V L+ +L ++ +++ L QG H IK G + L SL
Sbjct: 198 VLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVD 257
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMIT-RNIKPDSV 357
Y KCG+V +AR FD++ +++W AMI+G A N EA+ LFR MI+ I P+SV
Sbjct: 258 MYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSV 317
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSE-YASDIFVNTALIDMYAKCGNVESARIVFDR 416
+ + V +LKL + + +V KS+ Y FV++ LID+Y KCG++ S R VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
+ +++ I W+A++ GY +G+ +A+ M+Q G P+ VT +L C +++G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 477 WELFHC 482
E+ HC
Sbjct: 438 KEI-HC 442
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 245/452 (54%), Gaps = 20/452 (4%)
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
++ C L + + +H Q+I G + + L+ + + + A + + + +
Sbjct: 15 LISKCKSLQNLKQ---IHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPS 70
Query: 220 VVSWTSIISGYAQNGEALE---ALRLFNQM---RNTDVKLDWIALVSIVRAYG-DVDDLE 272
V + ++IS N + + A L++Q+ R+ V+ + S+ +A G D
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 273 QGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISG 330
GR+LH ++K D + +L FYA CG++ ARS F++++ + WN +++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 331 YAKNGHA---EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
YA + EE + LF M ++P+ +++ + + A +G W YV K+
Sbjct: 191 YANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNL 247
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA 447
+ FV T+LID+Y+KCG + AR VFD S++DV ++AMI G +HG G E I LY +
Sbjct: 248 TLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 448 MRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAG 506
+ G+ P+ TF+ ++AC+HSGLV EG ++F+ M+ +GIEP+ EHY C+VDLLGR+G
Sbjct: 308 LISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 507 YLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSN 566
L++A + I KM ++P ++W + L + + H GE A K L L+ N+G+YV LSN
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSN 427
Query: 567 LYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
+YA W V R LM++ ++K G S +
Sbjct: 428 IYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 192/391 (49%), Gaps = 20/391 (5%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVF 120
+LI ++L QIH Q+I GL H+ + ++KL++ SS + + YA + + +P VF
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC-LSYALSILRQIPNPSVF 72
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLM------RREGVDPDGFTFPYVLKACTELLDF-RLS 173
L+N +I ++ T + L R V P+ FT+P + KA + R
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 174 CLVHGQVIRY--GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYA 231
+H V+++ D FVQ LV YA CG + AR +F+ + + + +W ++++ YA
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYA 192
Query: 232 QNGEA---LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
+ E E L LF +M+ V+ + ++LV+++++ ++ + +G H ++K
Sbjct: 193 NSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTL 249
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+ SL Y+KCG + AR FD+M V +NAMI G A +G +E ++L++ +I
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGN 406
++ + PDS T A + G + + + + K+ Y + V L+D+ + G
Sbjct: 310 SQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 407 VESARIVFDRTSEK-DVIMWSAMIMGYGLHG 436
+E A + K + +W + + HG
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 5/285 (1%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLI--VSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
F AS D H RH +H ++ + + H+ F+ LV +N G + AR LF+
Sbjct: 119 FKASGFDAQWH-RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR 177
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
PD+ WN ++ Y+ S + E+ L R V P+ + ++K+C L +F
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVW 237
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
H V++ + FV L+ +Y+KCG + AR VFD ++ R V + ++I G A +G
Sbjct: 238 AHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGF 297
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM-GFEDEPDLLI 294
E + L+ + + + D V + A +++G + + + G E + +
Sbjct: 298 GQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYG 357
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTS-SVIMWNAMISGYAKNGHAE 338
L + G++ A +M + +W + + +G E
Sbjct: 358 CLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFE 402
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 206/394 (52%), Gaps = 1/394 (0%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H ++ G+ N + + LV + G + A + FD DV W A+I SR
Sbjct: 205 QVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG 263
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
I M+ M P+ FT +LKAC+E R VH V++ DVFV
Sbjct: 264 HGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGT 323
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ MYAKCG I R VFDG+++R V+WTSII+ +A+ G EA+ LF M+ +
Sbjct: 324 SLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIA 383
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
+ + +VSI+RA G V L G+ LH IIK E + +L Y KCG+ A +
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
Q+ + V+ W AMISG + GH EA+D +EMI ++P+ T SA A A SL
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
+ + + K+ S++FV +ALI MYAKCG V A VFD EK+++ W AMIMGY
Sbjct: 504 IGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYA 563
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
+G EA+ L + M G +D F +L+ C
Sbjct: 564 RNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 239/501 (47%), Gaps = 21/501 (4%)
Query: 44 GHVVSLDHGLNLDS------FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNG 97
G V+ D + DS A + +S R + +IH + + L++
Sbjct: 67 GENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISS 126
Query: 98 SSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD-PDGFT 156
LG + YARK+FD + W A+I GY + L ++ + G+ +
Sbjct: 127 CVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERM 186
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN 216
F +L C+ +F L VHG +++ G G ++ V++ LV YA+CG + A FD +
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMME 245
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
++ V+SWT++IS ++ G ++A+ +F M N + + SI++A + L GR
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGH 336
+H ++K + + + SL YAKCG++ R FD M + + W ++I+ +A+ G
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGF 365
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
EEA+ LFR M R++ +++TV S A VG+L L + + + K+ ++++ +
Sbjct: 366 GEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGST 425
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
L+ +Y KCG A V + +DV+ W+AMI G G EA++ M Q GV PN
Sbjct: 426 LVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPN 485
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCV------VDLLGRAGYLDQ 510
T+ L AC +S + G + I +N S V + + + G++ +
Sbjct: 486 PFTYSSALKACANSESLLIGRSI------HSIAKKNHALSNVFVGSALIHMYAKCGFVSE 539
Query: 511 AYDFIMKMSIEPGVSVWGALL 531
A+ M E + W A++
Sbjct: 540 AFRVFDSMP-EKNLVSWKAMI 559
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
++H Q+I + ++ N ++ + LV G A + + DV W A+I G S
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
++ M +EGV+P+ FT+ LKAC + +H + +VFV +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
L+ MYAKCG + A VFD + ++ +VSW ++I GYA+NG EAL+L +M ++
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIK 283
D +I+ GD++ E S C ++
Sbjct: 586 DDYIFATILSTCGDIELDEAVESSATCYLE 615
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 227/413 (54%), Gaps = 2/413 (0%)
Query: 188 DVFVQNGLVAMYAKCGNIGMARV-VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM 246
+V + + LV Y+K ++ + VF + R + SW II ++++G A +++ LF +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 247 -RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ 305
R + V+ D L I+RA + + G +H +K+GF + +L Y G+
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 306 VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
++ AR FD M +++ AM GY + G A + +FREM DSV + S +A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMW 425
Q+G+LK + + + + + + A+ DMY KC ++ A VF S +DVI W
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 426 SAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG 485
S++I+GYGL G + L+ M + G+ PN VTF+G+L+AC H GLV + W F M+
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE 364
Query: 486 FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEY 545
+ I P +HY+ V D + RAG L++A F+ M ++P +V GA+LS CK++ +V +GE
Sbjct: 365 YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGER 424
Query: 546 AAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
A++L L P +YV L+ LY+++ +D +R M+EK +SK G S I
Sbjct: 425 VARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 194/380 (51%), Gaps = 3/380 (0%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI-CYARKLFDEFSHPDV 119
SL+ +S + +HL +H L+ + L N L +KLV S L H+ + +F + ++
Sbjct: 39 SLLHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNI 98
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVHG 178
F WN II +SRS +I+++ M RE V PD FT P +L+AC+ + + L+H
Sbjct: 99 FSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHV 158
Query: 179 QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALE 238
++ GF +FV + LV MY G + AR +FD + R V +T++ GY Q GEA+
Sbjct: 159 LCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAML 218
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
L +F +M + LD + +VS++ A G + L+ G+S+HG I+ +L ++T
Sbjct: 219 GLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITD 278
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
Y KC + A + F M VI W+++I GY +G + LF EM+ I+P++VT
Sbjct: 279 MYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVT 338
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRT 417
A A G ++ + + + ++ ++ D ++ G +E A + + D
Sbjct: 339 FLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP 398
Query: 418 SEKDVIMWSAMIMGYGLHGQ 437
+ D + A++ G ++G
Sbjct: 399 VKPDEAVMGAVLSGCKVYGN 418
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 206/371 (55%), Gaps = 5/371 (1%)
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
D L S VR+ G D G H +K GF + L SL Y G+V A
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
F++M +V+ W AMISG+A+ + + L+ +M P+ T AL SA GS
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF--TALLSACTGSG 235
Query: 373 KLAQWMDDYVSKSEYA--SDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIM 430
L Q + S + ++ +LI MY KCG+++ A +FD+ S KDV+ W++MI
Sbjct: 236 ALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIA 295
Query: 431 GYGLHGQGWEAINLYH-AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIE 489
GY HG +AI L+ M ++G P+ +T++G+L++C H+GLV+EG + F+ M G++
Sbjct: 296 GYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLK 355
Query: 490 PRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKK 549
P HYSC+VDLLGR G L +A + I M ++P +WG+LL +C++H V G AA++
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHV 609
L+P +VQL+NLYAS W A VR LM++KGL + G S IEIN + +F
Sbjct: 416 RLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKA 475
Query: 610 GDKSHPRSDEI 620
D S+ R EI
Sbjct: 476 EDGSNCRMLEI 486
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 156/300 (52%), Gaps = 2/300 (0%)
Query: 145 MRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGN 204
++R+G D + +++C DFR H ++ GF DV++ + LV +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 205 IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
+ A VF+ + +R VVSWT++ISG+AQ L+L+++MR + + +++ A
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
L QGRS+H + MG + + SL + Y KCG + A FDQ V+ W
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
N+MI+GYA++G A +A++LF M+ ++ KPD++T + G +K + + ++
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 384 KSEYASDIFVNTALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ ++ + L+D+ + G ++ A ++ + + + ++W +++ +HG W I
Sbjct: 351 EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGI 410
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 128/257 (49%), Gaps = 4/257 (1%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
H + G + +L + LV + G + A K+F+E +V W A+I G+++
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWR 201
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+++Y MR+ DP+ +TF +L ACT VH Q + G + + N
Sbjct: 202 VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNS 261
Query: 195 LVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN-QMRNTDVKL 253
L++MY KCG++ A +FD +++ VVSW S+I+GYAQ+G A++A+ LF M + K
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKP 321
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D I + ++ + +++GR + + G + E + L + G + A
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Query: 314 DQ--MKTSSVIMWNAMI 328
+ MK +SVI W +++
Sbjct: 382 ENMPMKPNSVI-WGSLL 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 56 DSFYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD 112
D + +L+ T L Q +H Q + GLK + L++ G + A ++FD
Sbjct: 221 DYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD 280
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR-REGVDPDGFTFPYVLKAC 164
+FS+ DV WN++I GY++ L IE++ LM + G PD T+ VL +C
Sbjct: 281 QFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 267/502 (53%), Gaps = 17/502 (3%)
Query: 106 YARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACT 165
+A LFDE D+ N+ + + RS +T+ ++ + R D TF VL AC+
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS 225
L VH +I+ G + L+ MY+K G++ + VF+ + ++ +VSW +
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 226 IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
++SG+ +NG+ EAL +F M V++ L S+V+ + L+QG+ +H ++ G
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 286 FEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT-SSVIMWNAMISGYAKNGHAEEAVDLF 344
D L ++ +FY+ G + A ++ + + +M N++ISG +N + +EA L
Sbjct: 216 -RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 345 REMITRNIKPDSVTVRSAALASAQVGS-LKLAQWMDDYVSKSEYASDIFVNTALIDMYAK 403
+P+ V V S++LA S L + + + ++ + SD + L+DMY K
Sbjct: 275 SRQ-----RPN-VRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGK 328
Query: 404 CGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ--AGVCPNDVTFI 461
CG + AR +F K V+ W++MI Y ++G G +A+ ++ M + +GV PN VTF+
Sbjct: 329 CGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 462 GLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSI 520
+++AC H+GLV+EG E F M+ + + P EHY C +D+L +AG ++ + + +M
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 521 EPGVS----VWGALLSACKIHRHVTLGEYAAKKLF-SLDPYNTGHYVQLSNLYASSRLWD 575
S +W A+LSAC ++ +T GEY A++L P N YV +SN YA+ WD
Sbjct: 449 NDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 576 HVAHVRVLMREKGLSKDLGYSV 597
V +R ++ KGL K G+S+
Sbjct: 509 VVEELRGKLKNKGLVKTAGHSL 530
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 169/355 (47%), Gaps = 16/355 (4%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H +I G + T L++ S GH+ + ++F+ D+ WNA++ G+ R+
Sbjct: 105 QVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNG 164
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + ++ M RE V+ FT V+K C L + VH V+ G V +
Sbjct: 165 KGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGT 223
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRT-VVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
+++ Y+ G I A V++ LN T V S+ISG +N EA L ++ R +V+
Sbjct: 224 AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-PNVR 282
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ L S + D DL G+ +H ++ GF + L L Y KCGQ++ AR+
Sbjct: 283 V----LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTI 338
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR--NIKPDSVTVRSAALASAQVG 370
F + + SV+ W +MI YA NG +A+++FREM + P+SVT A A G
Sbjct: 339 FRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAG 398
Query: 371 SLKLAQWMDDYVSKSEY----ASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
+K + + K +Y ++ +V ID+ +K G E + +R E D
Sbjct: 399 LVKEGKECFGMM-KEKYRLVPGTEHYV--CFIDILSKAGETEEIWRLVERMMEND 450
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 146/294 (49%), Gaps = 24/294 (8%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS-HPDVFLWNAIIRGYSRS 132
Q+H ++V+G + L T +++ S++G I A K+++ + H D + N++I G R+
Sbjct: 206 QVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRN 264
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
RN E + LM R+ P+ L C++ D + +H +R GF D +
Sbjct: 265 ---RNYKEAFLLMSRQ--RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQM--RNTD 250
NGL+ MY KCG I AR +F + ++VVSWTS+I YA NG+ ++AL +F +M +
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEP--DLLISLTAFYAKCGQV-- 306
V + + + ++ A +++G+ G ++K + P + + +K G+
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGKECFG-MMKEKYRLVPGTEHYVCFIDILSKAGETEE 438
Query: 307 ---IVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFR-EMITRNIKPDS 356
+V R + ++ +W A++S + N +DL R E + R + ++
Sbjct: 439 IWRLVERMMENDNQSIPCAIWVAVLSACSLN------MDLTRGEYVARRLMEET 486
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 166/543 (30%), Positives = 266/543 (48%), Gaps = 54/543 (9%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE--G 149
T +V G G + A +LF E ++ W A+I G++ + L+R + ++ M+++
Sbjct: 235 TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA 294
Query: 150 VDPDGFTFPYVLKACTEL-LDFR-LSCLVHGQVIRYGFGP---DVFVQNGLVAMYAKCGN 204
V P+G T + AC L ++FR L +H QVI G+ D + LV MYA G
Sbjct: 295 VSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGL 354
Query: 205 IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
I A+ + + D + S II+ Y +NG+ A LF ++++ K+ W +++
Sbjct: 355 IASAQSLLNESFD--LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID---- 408
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
Y + G V A F ++ + W
Sbjct: 409 ----------------------------------GYLEAGDVSRAFGLFQKLHDKDGVTW 434
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSK 384
MISG +N EA L +M+ +KP + T ++ +L + + ++K
Sbjct: 435 TVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAK 494
Query: 385 SE--YASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ Y D+ + +L+ MYAKCG +E A +F + +KD + W++MIMG HG +A+
Sbjct: 495 TTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKAL 554
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDL 501
NL+ M +G PN VTF+G+L+AC+HSGL+ G ELF M+ + I+P +HY ++DL
Sbjct: 555 NLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDL 614
Query: 502 LGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVT----LGEYAAKKLFSLDPYN 557
LGRAG L +A +FI + P +V+GALL C ++ + E AA +L LDP N
Sbjct: 615 LGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVN 674
Query: 558 TGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRS 617
+V L N+YA D +R M KG+ K G S + +NG+ VF GDKS +
Sbjct: 675 APGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEA 734
Query: 618 DEI 620
++
Sbjct: 735 AQM 737
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 130/537 (24%), Positives = 213/537 (39%), Gaps = 109/537 (20%)
Query: 32 IKHLCSSSVLNLGHVVSLDHGLNLDSFYASLIDN-STHKRHLDQ----IHNQLIVSGLKH 86
++ LC V +SL ++ +Y I N +++R I +L GL H
Sbjct: 1 MRALCVKKVCGFLSKLSLRSSISCRRYYGDKIPNYGSYRRGFSNEEALILRRLSEGGLVH 60
Query: 87 NGFLI---------------TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSR 131
L+ T L++ + G++ AR LF+ ++ NA++ GY +
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVK 120
Query: 132 SNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFV 191
R E + L R + + ++ +L A + D R V ++ +V
Sbjct: 121 C---RRMNEAWTLFRE--MPKNVVSWTVMLTALCD--DGRSEDAV--ELFDEMPERNVVS 171
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
N LV + G++ A+ VFD + R VVSW ++I GY +N EA LF M +V
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ W ++V YG Y + G V A
Sbjct: 232 -VTWTSMV-----YG---------------------------------YCRYGDVREAYR 252
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI--TRNIKPDSVTVRSAALASAQV 369
F +M +++ W AMISG+A N EA+ LF EM + P+ T+ S A A +
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 370 GS--LKLAQWM--------------DDYVSKS---EYASDIFVNTA-------------- 396
G +L + + D ++KS YAS + +A
Sbjct: 313 GVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCN 372
Query: 397 -LIDMYAKCGNVESARIVFDRT-SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC 454
+I+ Y K G++E A +F+R S D + W++MI GY G A L+ +
Sbjct: 373 IIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD---- 428
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
+ VT+ +++ + L E L M G++P N YS ++ G LDQ
Sbjct: 429 KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 250/527 (47%), Gaps = 40/527 (7%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGY 129
R L Q+H ++ G N L T +V+ + AR++FDE +P WN I+R Y
Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+ M+ M V P T V+ AC+ L + ++H ++ D
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
V + MY KC + AR VFD + + SWTS +SGYA +G EA LF+ M
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 250 DV-------------------------------KLDWIALVSIVRAYGDVDDLEQGRSLH 278
++ +D + LV I+ + D++ G+ H
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM-KTSSVIMWNAMISGYAKNGHA 337
G I + G++ + +L Y KCG + A +F QM + + WNA+++G A+ G +
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
E+A+ F M KP T+ + A + +L L + + ++ + Y D+ + A+
Sbjct: 479 EQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAM 537
Query: 398 IDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
+DMY+KC + A VF + +D+I+W+++I G +G+ E L+ + GV P+
Sbjct: 538 VDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDH 597
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMR-GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIM 516
VTF+G+L AC G V G++ F M + I P+ EHY C+++L + G L Q +F++
Sbjct: 598 VTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLL 657
Query: 517 KMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
M +P + + + AC+ +R LG +AAK+L + HY+Q
Sbjct: 658 LMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMN------DHYLQ 698
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 228/489 (46%), Gaps = 56/489 (11%)
Query: 89 FLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
FL+ + + G + AR+LF+E D WNA+I +++ + M+ M R+
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
GV +F VLK+C +LD RL +H V++YG+ +V ++ +V +Y KC + A
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 209 RVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDV 268
R VFD + + + VSW I+ Y + G EA+ +F +M +V+ + S++ A
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 269 DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMI 328
LE G+ +H +K+ + + S+ Y KC ++ AR FDQ ++ + W + +
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 329 SGYAKNGHAEEAVDLFREMITRNI-------------------------------KPDSV 357
SGYA +G EA +LF M RNI D+V
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRT 417
T+ + + +++ + ++ + Y +++ V AL+DMY KCG ++SA I F +
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 418 SE-KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACN-------- 468
SE +D + W+A++ G G+ +A++ + M Q P+ T LL C
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 469 ---HSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVS 525
H L+R+G+++ +RG +VD+ + D A + + K + +
Sbjct: 516 KAIHGFLIRDGYKIDVVIRG-----------AMVDMYSKCRCFDYAIE-VFKEAATRDLI 563
Query: 526 VWGALLSAC 534
+W +++ C
Sbjct: 564 LWNSIIRGC 572
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 188/390 (48%), Gaps = 33/390 (8%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
V ++ + P +F+ N + Y KCG + AR +F+ + +R SW ++I+ AQNG
Sbjct: 83 VQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGV 142
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
+ E R+F +M V+ + ++++ G + DL R LH ++K G+ DL S
Sbjct: 143 SDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETS 202
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPD 355
+ Y KC + AR FD++ S + WN ++ Y + G +EAV +F +M+ N++P
Sbjct: 203 IVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPL 262
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD 415
+ TV S LA ++ +L++ + + K +D V+T++ DMY KC +ESAR VFD
Sbjct: 263 NHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD 322
Query: 416 RTSEKD-------------------------------VIMWSAMIMGYGLHGQGW-EAIN 443
+T KD ++ W+AM+ GY +H W EA++
Sbjct: 323 QTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGY-VHAHEWDEALD 381
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLG 503
MRQ ++VT + +L C+ V+ G + + G + + ++D+ G
Sbjct: 382 FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYG 441
Query: 504 RAGYLDQAYDFIMKMSIEPGVSVWGALLSA 533
+ G L A + +MS W ALL+
Sbjct: 442 KCGTLQSANIWFRQMSELRDEVSWNALLTG 471
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/465 (30%), Positives = 247/465 (53%), Gaps = 39/465 (8%)
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
A VFD + + V+S T++I + + +EA + F ++ ++ + +++ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 268 VDDLEQGRSLHGCIIKMG---------------------------FED--EPDL--LISL 296
D++ G+ LH +KMG F+D +P++ + +L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIK-PD 355
+ Y K + A S F M SV+ WNA+I G+++ G EEAV+ F +M+ + P+
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 356 SVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS-DIFVNTALIDMYAKCGNVESARIVF 414
T A A + + S + + K ++FV +LI Y+KCGN+E + + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 415 DRTSE--KDVIMWSAMIMGYGLHGQGWEAINLYHAM-RQAGVCPNDVTFIGLLTACNHSG 471
++ E ++++ W++MI GY +G+G EA+ ++ M + + PN+VT +G+L ACNH+G
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 472 LVREGWELFHCMRGFGIEP---RNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWG 528
L++EG+ F+ +P EHY+C+VD+L R+G +A + I M ++PG+ W
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWK 405
Query: 529 ALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
ALL C+IH + L + AA K+ LDP + YV LSN Y++ W +V+ +R M+E G
Sbjct: 406 ALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETG 465
Query: 589 LSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKE 633
L + G S IE+ +++VF DK++ DE+Y + + + L+E
Sbjct: 466 LKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEE 510
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 169/374 (45%), Gaps = 46/374 (12%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A K+FDE DV A+I + + + + + + G+ P+ FTF V+ + T
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
D +L +H ++ G +VFV + ++ Y K + AR FD D VVS T++
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVS-------------------------- 260
ISGY + E EAL LF M V + W A++
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSV-VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 261 -------IVRAYGDVDDLEQGRSLHGCIIK-MGFEDEPDLLISLTAFYAKCGQVIVARSF 312
+ A ++ G+S+H C IK +G + SL +FY+KCG + +
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 313 FDQMKTS--SVIMWNAMISGYAKNGHAEEAVDLFREMIT-RNIKPDSVTVRSAALAS--- 366
F++++ +++ WN+MI GYA NG EEAV +F +M+ N++P++VT+ A
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 367 --AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV-ESARIVFDRTSEKDVI 423
Q G + + ++DY + + + ++DM ++ G E+ ++ + +
Sbjct: 345 GLIQEGYMYFNKAVNDYDDPNLLELEHY--ACMVDMLSRSGRFKEAEELIKSMPLDPGIG 402
Query: 424 MWSAMIMGYGLHGQ 437
W A++ G +H
Sbjct: 403 FWKALLGGCQIHSN 416
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 48/325 (14%)
Query: 52 GLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYA 107
G+ + F + ++I +ST R + Q+H + GL N F+ + ++N L + A
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 108 RKLFDEFSHPDVF-------------------------------LWNAIIRGYSRSNLFR 136
R+ FD+ P+V WNA+I G+S++
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNE 207
Query: 137 NTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRY-GFGPDVFVQNG 194
+ + M REG V P+ TFP + A + + +H I++ G +VFV N
Sbjct: 208 EAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNS 267
Query: 195 LVAMYAKCGNIGMARVVFDGLND--RTVVSWTSIISGYAQNGEALEALRLFNQM-RNTDV 251
L++ Y+KCGN+ + + F+ L + R +VSW S+I GYA NG EA+ +F +M ++T++
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNL 327
Query: 252 KLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL-----ISLTAFYAKCGQV 306
+ + + ++ ++ A +++G + D+P+LL + ++ G+
Sbjct: 328 RPNNVTILGVLFACNHAGLIQEGYMYFNKAV--NDYDDPNLLELEHYACMVDMLSRSGRF 385
Query: 307 IVARSFFDQMKTSSVI-MWNAMISG 330
A M I W A++ G
Sbjct: 386 KEAEELIKSMPLDPGIGFWKALLGG 410
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 193/346 (55%), Gaps = 18/346 (5%)
Query: 271 LEQGRSLHGCIIKMGFEDEPDLL-ISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
L GR +HG + K+GF E +L+ +L FYAK G + AR FD+M + + WNAMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 330 GYAK-----NGHAEEAVDLFREM--ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYV 382
GY N +A +A+ LFR ++P T+ A +Q G L++ + Y+
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 383 SKSEYAS--DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
K + D+F+ TAL+DMY+KCG + +A VF+ K+V W++M G L+G+G E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVV 499
NL + M ++G+ PN++TF LL+A H GLV EG ELF M+ FG+ P EHY C+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 500 DLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL---DPY 556
DLLG+AG + +AY FI+ M I+P + +L +AC I+ +GE K L + D
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 557 NTGH----YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
+G YV LSN+ A W V +R M+E+ + GYS +
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 188/409 (45%), Gaps = 41/409 (10%)
Query: 58 FYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLV---------NGSSNLGHICYAR 108
F + L NS QIH QL+++G H+ L KL+ SS L H+
Sbjct: 10 FLSLLQQNSKTLIQAKQIHAQLVINGC-HDNSLFGKLIGHYCSKPSTESSSKLAHLL--- 65
Query: 109 KLFDEFSHPDVFLWNAIIRGYSRSN---LFRNTIEMYGLMRREGVDPDGFTFPYVL---K 162
+F F HPD FL+N +++ + +F N L+ + TF +VL
Sbjct: 66 -VFPRFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYL-----NERTFVFVLGACA 119
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDV-FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
R+ +VHG V + GF + + L+ YAK G++ AR VFD + +RT V
Sbjct: 120 RSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSV 179
Query: 222 SWTSIISGYAQ-----NGEALEALRLFNQMR--NTDVKLDWIALVSIVRAYGDVDDLEQG 274
+W ++I GY N A +A+ LF + + V+ +V ++ A LE G
Sbjct: 180 TWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG 239
Query: 275 RSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYA 332
+HG I K+GF E D+ I +L Y+KCG + A S F+ MK +V W +M +G A
Sbjct: 240 SLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLA 299
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS-KSEYASDI 391
NG E +L M IKP+ +T S A +G ++ + ++ + S K+ +
Sbjct: 300 LNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVE--EGIELFKSMKTRFGVTP 357
Query: 392 FVN--TALIDMYAKCGNVESA-RIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
+ ++D+ K G ++ A + + + D I+ ++ ++G+
Sbjct: 358 VIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/492 (29%), Positives = 235/492 (47%), Gaps = 55/492 (11%)
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVA------------MYAKCGNIG 206
Y+LK C L H Q I G + F QN + A A +
Sbjct: 9 YLLKLCRTLKHLHQ---FHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVS 65
Query: 207 MARVVFDGLNDRTVVSWTSIIS-GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
A VF + + + + +II +L + R F +MR V D+ + +A
Sbjct: 66 YATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKAC 125
Query: 266 GDVD--DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYA---------------------- 301
DL ++LH ++ G + L +L Y+
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 302 ---------KCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
K +++ AR FD M ++ WN++ISGYA+ H EA+ LF EM+ +
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARI 412
KPD+V + S A AQ G + + + DY + D F+ T L+D YAKCG +++A
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 413 VFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGL 472
+F+ S+K + W+AMI G +HG G ++ + M +G+ P+ VTFI +L C+HSGL
Sbjct: 306 IFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL 365
Query: 473 VREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPG----VSVW 527
V E LF MR + + +HY C+ DLLGRAG +++A + I +M + G + W
Sbjct: 366 VDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 528 GALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVR-VLMRE 586
LL C+IH ++ + E AA ++ +L P + G Y + +YA++ W+ V VR ++ R+
Sbjct: 426 SGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRD 485
Query: 587 KGLSKDLGYSVI 598
K + K++G+S +
Sbjct: 486 KKVKKNVGFSKV 497
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 197/422 (46%), Gaps = 56/422 (13%)
Query: 70 RHLDQIHNQLIVSG-----LKHNG------FLITKLV-NGSSNLGHICYARKLFDEFSHP 117
+HL Q H Q I SG K N F IT + + S++ + YA +F ++P
Sbjct: 18 KHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNP 77
Query: 118 DVFLWNAIIR---GYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL--DFRL 172
F +N IIR + S+L ++ + MRR V PD TFP+V KAC D L
Sbjct: 78 STFCFNTIIRICTLHEPSSL--SSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYA-------------------------------K 201
+H Q +R+G D+F N L+ +Y+ K
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 202 CGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSI 261
I AR +FD + R +VSW S+ISGYAQ EA++LF++M +K D +A+VS
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 262 VRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSV 321
+ A D ++G+++H + + L L FYAKCG + A F+ ++
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTL 315
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ-WMDD 380
WNAMI+G A +G+ E VD FR+M++ IKPD VT S + + G + A+ D
Sbjct: 316 FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESA-----RIVFDRTSEKDVIMWSAMIMGYGLH 435
S + ++ + D+ + G +E A ++ D + + ++ WS ++ G +H
Sbjct: 376 MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIH 435
Query: 436 GQ 437
G
Sbjct: 436 GN 437
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 45/332 (13%)
Query: 94 LVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPD 153
L++G I AR+LFD D+ WN++I GY++ N R I+++ M G+ PD
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 154 GFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD 213
L AC + D++ +H R D F+ GLV YAKCG I A +F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 214 GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ 273
+D+T+ +W ++I+G A +G + F +M ++ +K D + +S+
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISV------------ 356
Query: 274 GRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT-----SSVIMWNAMI 328
L GC + G V AR+ FDQM++ + + M
Sbjct: 357 ---LVGC--------------------SHSGLVDEARNLFDQMRSLYDVNREMKHYGCMA 393
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV-GSLKLAQWMDDYVSKSEY 387
+ G EEA ++ +M + + S L ++ G++++A+ + V K+
Sbjct: 394 DLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV-KALS 452
Query: 388 ASDIFVNTALIDMYAKC---GNVESARIVFDR 416
D V +++MYA V R + DR
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
IH+ L + FL T LV+ + G I A ++F+ S +F WNA+I G +
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACT---------ELLDFRLSCL-VHGQVIRYG 184
T++ + M G+ PDG TF VL C+ L D S V+ ++ YG
Sbjct: 331 GELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYG 390
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
D+ + GL+ A+ + ++ DG N +++W+ ++ G +G A + N
Sbjct: 391 CMADLLGRAGLIEEAAEM----IEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAAN 446
Query: 245 QMR 247
+++
Sbjct: 447 RVK 449
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 212/399 (53%), Gaps = 12/399 (3%)
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+ K+G ++A+ + + N D + A + L+ A+ + +S S
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 390 DIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
D+ N L++MY+ CG A VF++ SEK++ W +I + +G G +AI+++ +
Sbjct: 288 DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 450 QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYL 508
+ G P+ F G+ AC G V EG F M R +GI P E Y +V++ G+L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 509 DQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLY 568
D+A +F+ +M +EP V VW L++ ++H ++ LG+Y A+ + LDP + L
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP---------TRLN 458
Query: 569 ASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLE 628
SR + V+ EK K + + +Q F GD + P +DE++ ++ L+
Sbjct: 459 KQSR--EGFIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLK 516
Query: 629 RRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACV 688
+ E+G+V T LHD++ E KE L HSERIA A ++++AP + KNLR CV
Sbjct: 517 MHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCV 576
Query: 689 NCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
+CH+ +K++S +V RE+I RD RFH K+G C+C DYW
Sbjct: 577 DCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 200 AKCGNIGMARVVFDGLNDRTVVSWTSII----SGYAQNGEALEALRLFNQMRNTDVKLDW 255
AK + R + + L + +T I+ + ++G+ +AL + + + + +D
Sbjct: 195 AKVSVLAKIRALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDL 254
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
L+ + + G+ + L++ +++HG I + L Y+ CG A S F++
Sbjct: 255 SRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEK 314
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
M ++ W +I +AKNG E+A+D+F PD R A +G +
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG 374
Query: 376 QWMDDYVSKS-EYASDIFVNTALIDMYAKCGNVESARIVFDRTS-EKDVIMWSAMIMGYG 433
+ +S+ A I +L++MYA G ++ A +R E +V +W ++
Sbjct: 375 LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSR 434
Query: 434 LHG 436
+HG
Sbjct: 435 VHG 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
K C E + + VHG++ D+ + L+ MY+ CG A VF+ ++++ +
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
+W II +A+NG +A+ +F++ + D I A G + D+++G LH
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHFES 380
Query: 282 IKMGFEDEPDL--LISLTAFYAKCGQVIVARSFFDQMKTS-SVIMWNAMISGYAKNGHAE 338
+ + P + +SL YA G + A F ++M +V +W +++ +G+ E
Sbjct: 381 MSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLE 440
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 251/510 (49%), Gaps = 7/510 (1%)
Query: 102 GHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVL 161
G++ A LFDE DV WN +I G I ++ M+R + P FTF +
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGP-DVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV 220
T + R +HG I G ++ V N ++ MY + G A VF + DR V
Sbjct: 144 SLVTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
VSW +I + +G AL F MR +++ D + +V D+ +L +G+
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
IKMGF +L + ++KC ++ + F +++ ++ N+MI Y+ + E+A
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDA 320
Query: 341 VDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
+ LF +T++++PD T S+ L+S L + V K + D V T+L++M
Sbjct: 321 LRLFILAMTQSVRPDKFTF-SSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEM 379
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA-MRQAGVCPNDVT 459
Y K G+V+ A VF +T KD+I W+ +IMG + + E++ +++ + + P+ VT
Sbjct: 380 YFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVT 439
Query: 460 FIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
+G+L AC ++G V EG ++F M + G+ P NEHY+C+++LL R G +++A D K+
Sbjct: 440 LMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKI 499
Query: 519 SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVA 578
EP +W +L A L E AK + +P ++ Y+ L +Y + W++
Sbjct: 500 PFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSV 559
Query: 579 HVRVLMREKGLSKDLGYSVIEINGKLQVFH 608
+R M E L G S I I + F
Sbjct: 560 KLRYAMNEHKLKSAQGSSKISIESSVFSFE 589
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 148/316 (46%), Gaps = 6/316 (1%)
Query: 57 SFYASLIDNSTHKRHLDQIHNQLIVSGL-KHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
S ASL+ T RH +QIH I SG+ ++N + +++ LG YA +F
Sbjct: 140 SILASLV---TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
DV WN +I S S ++ + LMR + PD +T V+ C++L +
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGE 235
I+ GF + V + M++KC + + +F L V S+I Y+ +
Sbjct: 257 ALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
+ALRLF V+ D S++ + V L+ G +H +IK+GF+ + + S
Sbjct: 317 GEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATS 375
Query: 296 LTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMI-TRNIKP 354
L Y K G V +A F + +I WN +I G A+N A E++ +F +++ +++KP
Sbjct: 376 LMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKP 435
Query: 355 DSVTVRSAALASAQVG 370
D VT+ +A G
Sbjct: 436 DRVTLMGILVACCYAG 451
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 153/349 (43%), Gaps = 43/349 (12%)
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYA 231
L+ +VH Q++ GF + N + +Y K G++ A +FD + D+ ++W + G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVS----------IVRAYGDVDDLE--------- 272
+NG AL LF++M DV + W ++S +R + D+ E
Sbjct: 82 KNGYLNNALDLFDEMPERDV-VSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFS 140
Query: 273 ----------QGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSS 320
G +HG I G +L++ S+ Y + G A S F M+
Sbjct: 141 ILASLVTCVRHGEQIHGNAICSGVS-RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDD 380
V+ WN +I + +G+ E A+D F M I+PD TV + + L +
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALA 259
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
K + S+ V A IDM++KC ++ + +F + D ++ ++MI Y H G +
Sbjct: 260 LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACN----------HSGLVREGWEL 479
A+ L+ V P+ TF +L++ N HS +++ G++L
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDL 368
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 8/231 (3%)
Query: 286 FEDEPD-----LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
F+D PD + L + K G + A FD+M V+ WN MISG G E
Sbjct: 62 FDDIPDKNTITWNVCLKGLF-KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 341 VDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
+ +F +M I+P T + LAS Q + + ++ V +++DM
Sbjct: 121 IRVFFDMQRWEIRPTEFTF--SILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDM 178
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
Y + G + A VF ++DV+ W+ +I+ G A++ + MR+ + P++ T
Sbjct: 179 YRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTV 238
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
+++ C+ + +G + G + +D+ + LD +
Sbjct: 239 SMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDS 289
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 207/416 (49%), Gaps = 43/416 (10%)
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNT-----DVKLDWIALVSIVRAYGDVDDLEQG 274
++S T +S YA G +AL LF QM ++ D + +AL S A+ V G
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPV----LG 67
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKN 334
S+H +K F P + +L Y KC V AR FD++ + ++WNAMIS Y
Sbjct: 68 GSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 335 GHAEEAVDLF---------------------------------REMITRNIKPDSVTVRS 361
G +EAV+L+ R+MI KP+ +T+ +
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
A + +G+ +L + + Y ++ + + L++ Y +CG++ ++VFD ++D
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
V+ WS++I Y LHG A+ + M A V P+D+ F+ +L AC+H+GL E F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 482 CMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
M+G +G+ +HYSC+VD+L R G ++AY I M +P WGALL AC+ + +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 541 TLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYS 596
L E AA++L ++P N +YV L +Y S + +R+ M+E G+ G S
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 127/319 (39%), Gaps = 49/319 (15%)
Query: 153 DGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF 212
D F LK+C L VH ++ F + FV L+ MY KC ++ AR +F
Sbjct: 47 DAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLF 106
Query: 213 DGLNDRTVVSWTSIISGYAQNGEALEALRLFN---------------------------- 244
D + R V W ++IS Y G+ EA+ L+
Sbjct: 107 DEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRA 166
Query: 245 -----QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAF 299
+M K + I L+++V A + + +H + E P L L
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 300 YAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
Y +CG ++ + FD M+ V+ W+++IS YA +G AE A+ F+EM + PD +
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 360 RSAALASAQVGSLKLA-----QWMDDY---VSKSEYASDIFVNTALIDMYAKCGNVESAR 411
+ A + G A + DY SK Y + L+D+ ++ G E A
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY-------SCLVDVLSRVGRFEEAY 339
Query: 412 IVFDRTSEKDVI-MWSAMI 429
V EK W A++
Sbjct: 340 KVIQAMPEKPTAKTWGALL 358
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNL 134
+H + S N F+ L++ + +ARKLFDE + +WNA+I Y+
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 135 FRNTIEMY-----------------GLMRREG----------------VDPDGFTFPYVL 161
+ +E+Y GL+ E P+ T ++
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV 221
AC+ + FRL +H R P +++GLV Y +CG+I ++VFD + DR VV
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
+W+S+IS YA +G+A AL+ F +M V D IA +++++A
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA 292
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 43/257 (16%)
Query: 319 SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS-AQVGSLKLAQW 377
+ +I +S YA G+ E+A++LF +M + P V S AL S A L
Sbjct: 10 TKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQ 437
+ + KS + S+ FV AL+DMY KC +V AR +FD +++ ++W+AMI Y G+
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 438 GWEAINLYHAMR---------------------------------QAGVCPNDVTFIGLL 464
EA+ LY AM + PN +T + L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 465 TACNHSGLVREGWELF-HCMRGFGIEPRNEHYSCVVDLLGRAG---YLDQAYDFIMKMSI 520
+AC+ G R E+ + R IEP + S +V+ GR G Y+ +D +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNL-IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME---- 244
Query: 521 EPGVSVWGALLSACKIH 537
+ V W +L+SA +H
Sbjct: 245 DRDVVAWSSLISAYALH 261
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/397 (32%), Positives = 210/397 (52%), Gaps = 19/397 (4%)
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
+ G ++AV++ + D + A +L+ A+ + ++++ S SDI
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAG 452
++I+MY+ CG+VE A VF+ E+++ W +I + +GQG +AI+ + +Q G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
P+ F + AC G + EG F M + +GI P EHY +V +L GYLD+A
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 512 YDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASS 571
F+ S+EP V +W L++ ++H + LG+ + LD +S
Sbjct: 338 LRFVE--SMEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD---------------AS 380
Query: 572 RLWDHVAHVRVLMREKGLSKD-LGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERR 630
RL V ++ L K+ L N ++ GD S P + E+Y ++ L+
Sbjct: 381 RLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYMALKSLKEH 440
Query: 631 LKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNC 690
+ EIG+VP ++ LHD++ E K+ENL H+ER A + T +++R+ KNLR C +C
Sbjct: 441 MIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADC 500
Query: 691 HSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
H+ +KL+SK+V RE+I RDA RFHH KDG+CSC +YW
Sbjct: 501 HNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 4/207 (1%)
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+ G+ +A+ + RN +D L I + GD L++ + +H I +
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
S+ Y+ CG V A + F+ M ++ W +I +AKNG E+A+D F
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN--TALIDMYAKCGNVES 409
KPD + A +G + + + K EY + +L+ M A+ G ++
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK-EYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 410 ARIVFDRTSEKDVIMWSAMIMGYGLHG 436
A + F + E +V +W ++ +HG
Sbjct: 337 A-LRFVESMEPNVDLWETLMNLSRVHG 362
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 4/201 (1%)
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFG-PDV 189
R + +E+ R EG D ++ + C + + + +VH + I G D+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVH-EFITSSVGISDI 216
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
N ++ MY+ CG++ A VF+ + +R + +W +I +A+NG+ +A+ F++ +
Sbjct: 217 SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQE 276
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQG-RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
K D I A G + D+ +G + G + +SL A+ G +
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 309 ARSFFDQMKTSSVIMWNAMIS 329
A F + M+ +V +W +++
Sbjct: 337 ALRFVESMEP-NVDLWETLMN 356
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 206/418 (49%), Gaps = 37/418 (8%)
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
+T + ++I Y GE +L LF M + V+ + + S+++A + G +L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD----------------------- 314
HG +K GF +P + S FY + G + +R FD
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 315 --------QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN---IKPDSVTVRS-- 361
+M + V+ W +I+G++K G +A+ +F EMI I P+ T S
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 362 AALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD 421
++ A+ G ++L + + YV E + TAL+DMY K G++E A +FD+ +K
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
V W+A+I +G+ +A+ ++ M+ + V PN +T + +LTAC S LV G +LF
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 482 CM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHV 540
+ + I P +EHY CVVDL+GRAG L A +FI + EP SV GALL ACKIH +
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENT 408
Query: 541 TLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
LG K+L L P + G YV LS A W +R M E G+ K YSV+
Sbjct: 409 ELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 36/284 (12%)
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
++N +IR Y + ++ ++ ++ M V P+ TFP ++KA +HGQ
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD-----------------GLNDRT---- 219
++ GF D FVQ V Y + G++ +R +FD G N
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 220 ----------VVSWTSIISGYAQNGEALEALRLFNQMRNTD---VKLDWIALVSIVRAYG 266
VVSWT++I+G+++ G +AL +F +M + + + VS++ +
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 267 DVDD--LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMW 324
+ D + G+ +HG ++ L +L Y K G + +A + FDQ++ V W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 325 NAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
NA+IS A NG ++A+++F M + + P+ +T+ + A A+
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACAR 336
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 28 FLKFIKHLCSSSVLNLG---HVVSLDHGLNLDSF--------YASLIDNSTHKRHLDQIH 76
F IK CSS ++ G H +L G D F Y + D + ++ D I
Sbjct: 89 FPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDIL 148
Query: 77 NQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFR 136
N +V+ L++ G + YA + F DV W +I G+S+ L
Sbjct: 149 NPCVVA--------CNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 137 NTIEMYGLM---RREGVDPDGFTFPYVLKACTELLD--FRLSCLVHGQVIRYGFGPDVFV 191
+ ++G M R + P+ TF VL +C RL +HG V+ +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTL 260
Query: 192 QNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDV 251
L+ MY K G++ MA +FD + D+ V +W +IIS A NG +AL +F M+++ V
Sbjct: 261 GTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYV 320
Query: 252 KLDWIALVSIVRA 264
+ I L++I+ A
Sbjct: 321 HPNGITLLAILTA 333
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 196/383 (51%), Gaps = 30/383 (7%)
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
E++ + PD + A + SL+ ++ + D+ +S++ D +N +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 406 NVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
++ A+ VFD +KD+ W M+ Y +G G +A++L+ M + G+ PN+ TF+ +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 466 ACNHSGLVREGWELFHCMRG-FGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGV 524
AC G + E + F M+ GI P+ EHY V+ +LG+ G+L +A +I + EP
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 525 SVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLM 584
W A+ + ++H + L +Y + + +DP V+
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA-----------------------VIN 442
Query: 585 REKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVL 644
+ + K ++ R+ Y + + K + +VP T VL
Sbjct: 443 KIPTPPPKSFKETNMVTSKSRILEF------RNLTFYKDEAKEMAAKKGVVYVPDTRFVL 496
Query: 645 HDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVERE 704
HD++ E KE+ L HSER+A+AYG+I T P L I KNLR C +CH+ IK++SK++ R
Sbjct: 497 HDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRV 556
Query: 705 IIVRDANRFHHFKDGLCSCGDYW 727
+IVRD RFHHFKDG CSCGDYW
Sbjct: 557 LIVRDNKRFHHFKDGKCSCGDYW 579
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 136/311 (43%), Gaps = 19/311 (6%)
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
L+++ IE+ +G PD F + ++C L S VH ++ F D + N
Sbjct: 220 LYKDAIELLD----KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKL 253
+++M+ +C +I A+ VFD + D+ + SW ++ Y+ NG +AL LF +M +K
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKP 335
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIK--MGFEDEPDLLISLTAFYAKCGQVIVARS 311
+ +++ A V +E+ LH +K G + + + + KCG ++ A
Sbjct: 336 NEETFLTVFLACATVGGIEEA-FLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 312 FFDQMK-TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
+ + + W AM YA+ H + ++ + E + ++ P + + +
Sbjct: 395 YIRDLPFEPTADFWEAM-RNYAR-LHGDIDLEDYMEELMVDVDPSKAVINK--IPTPPPK 450
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG--NVESARIVF---DRTSEKDVIMW 425
S K + E+ + F +M AK G V R V D+ +++ +++
Sbjct: 451 SFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLY 510
Query: 426 SA--MIMGYGL 434
+ + + YG+
Sbjct: 511 HSERLAIAYGI 521
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 254 DWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFF 313
D V + + ++ LE + +H ++ F +P L + + + +C + A+ F
Sbjct: 235 DRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVF 294
Query: 314 DQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
D M + W+ M+ Y+ NG ++A+ LF EM +KP+ T + LA A VG ++
Sbjct: 295 DHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIE 354
Query: 374 LAQWMDDYVSKSEYASDIFVNTAL--IDMYAKCGN-VESARIVFDRTSEKDVIMWSAMIM 430
A D + K+E+ L + + KCG+ VE+ + + D E W AM
Sbjct: 355 EAFLHFDSM-KNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 431 GYGLHG 436
LHG
Sbjct: 414 YARLHG 419
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 201/398 (50%), Gaps = 37/398 (9%)
Query: 159 YVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
Y L+ C+ + +H ++I++ D + L+++ + G A +VF+ L
Sbjct: 25 YFLRTCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 219 TVVSWTSIISGYAQNGEALEALRLFN-QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
+ +W +I + N + EAL LF M + + D +++A + G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD----------------------- 314
HG IK GF ++ +L Y KCG+ R FD
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 315 --------QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
QM +V+ W AMI+ Y KN +EA LFR M ++KP+ T+ + AS
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWS 426
Q+GSL + +W+ DY K+ + D F+ TALIDMY+KCG+++ AR VFD K + W+
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 427 AMIMGYGLHGQGWEAINLY-HAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM-R 484
+MI G+HG G EA++L+ +A V P+ +TF+G+L+AC ++G V++G F M +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 485 GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEP 522
+GI P EH +C++ LL +A +++A + + M +P
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 169/336 (50%), Gaps = 33/336 (9%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYS 130
L QIH ++I L ++ L+ +L++ SS+ G YA +F++ P F WN +IR S
Sbjct: 35 QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLS 94
Query: 131 RSNLFRNTIEMYGLMR-REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
++ R + ++ LM D FTFP+V+KAC RL VHG I+ GF DV
Sbjct: 95 VNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDV 154
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRT------------------------------ 219
F QN L+ +Y KCG R VFD + R+
Sbjct: 155 FFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMR 214
Query: 220 -VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
VVSWT++I+ Y +N EA +LF +M+ DVK + +V++++A + L GR +H
Sbjct: 215 NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVH 274
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAE 338
K GF + L +L Y+KCG + AR FD M+ S+ WN+MI+ +G E
Sbjct: 275 DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGE 334
Query: 339 EAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLK 373
EA+ LF EM +++PD++T A A G++K
Sbjct: 335 EALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 45/306 (14%)
Query: 270 DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMIS 329
+ Q + +H IIK ++ L+ L + + G+ A F+Q+++ S WN MI
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIR 91
Query: 330 GYAKNGHAEEAVDLF-REMITRNIKPDSVT---VRSAALASAQVGSLKLAQWMDDYVSKS 385
+ N EA+ LF MI+ + D T V A LAS+ S++L + K+
Sbjct: 92 SLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS---SIRLGTQVHGLAIKA 148
Query: 386 EYASDIFVNTALIDMYAKCG-------------------------------NVESARIVF 414
+ +D+F L+D+Y KCG ++SA IVF
Sbjct: 149 GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVF 208
Query: 415 DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVR 474
++ ++V+ W+AMI Y + + EA L+ M+ V PN+ T + LL A G +
Sbjct: 209 NQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLS 268
Query: 475 EGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALL 531
G + G + ++D+ + G L A +D + S+ + W +++
Sbjct: 269 MGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSL----ATWNSMI 324
Query: 532 SACKIH 537
++ +H
Sbjct: 325 TSLGVH 330
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/542 (27%), Positives = 245/542 (45%), Gaps = 49/542 (9%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
Q+H + G N L L+ + A K+FDE PDV WN+++ GY +S
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGP-DVFVQ 192
F+ I ++ + R V P+ F+F L AC L L +H ++++ G +V V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
N L+ MY KCG + A +VF + ++ VSW +I++ ++NG+ L F+QM N D
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSF 312
Y ++ D + K G A
Sbjct: 256 -----------TYNELIDA----------------------------FVKSGDFNNAFQV 276
Query: 313 FDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
M + WN +++GY + + EA + F +M + ++ D ++ A A + +
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGY 432
+ K S + V +ALIDMY+KCG ++ A ++F K++I+W+ MI GY
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 433 GLHGQGWEAINLYHAMRQAG-VCPNDVTFIGLLTACNHSGLVRE---GWELFHCM-RGFG 487
+G EAI L++ ++Q + P+ TF+ LL C+H + E G+ F M +
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGY--FEMMINEYR 454
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAA 547
I+P EH ++ +G+ G + QA I + W ALL AC + + + A
Sbjct: 455 IKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVA 514
Query: 548 KKLFSLDPYNTGH--YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQ 605
K+ L + Y+ +SNLYA W V +R +MRE G+ K++G S I+ K
Sbjct: 515 AKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCS 574
Query: 606 VF 607
+
Sbjct: 575 SY 576
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 207 MARVVFDGLNDRTVV-------SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
M R V + R+ V SW++I+ A+ G ++ LR ++ N K D LV
Sbjct: 1 MLRTVSNAFTTRSHVGSTASSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLV 59
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
++R G+ + R LHG + K GF L SL FY + A FD+M
Sbjct: 60 HLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMD 379
VI WN+++SGY ++G +E + LF E+ ++ P+ + +A A A++ L +
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 380 DYVSK-SEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQG 438
+ K ++ V LIDMY KCG ++ A +VF EKD + W+A++ +G+
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 439 WEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCV 498
+ +H M P+ VT+ L+ A SG +++ M P + ++ +
Sbjct: 240 ELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDMP----NPNSSSWNTI 291
Query: 499 VDLLGRAGYLDQAYDFIMKM 518
+ + +A +F KM
Sbjct: 292 LTGYVNSEKSGEATEFFTKM 311
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 231/498 (46%), Gaps = 80/498 (16%)
Query: 71 HLDQIHNQLIV-SGLKHNGFLITKLVNGSSNL-GHICYARKLFDEFSHPDVFLWNAIIRG 128
L+QIH QLIV + L + +++++ + L Y R +FD + P+VF+ N++ +
Sbjct: 21 QLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKY 80
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+S+ ++ + + +Y R G+ PD F+FP V+K+ R L V + GF D
Sbjct: 81 FSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFKD 135
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
+V+N ++ MY K ++ AR VFD ++ R W +ISGY + G EA +LF+ M
Sbjct: 136 PYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE 195
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
DV + W +++ + V DLE
Sbjct: 196 NDV-VSWTVMIT---GFAKVKDLEN----------------------------------- 216
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
AR +FD+M SV+ WNAM+SGYA+NG E+A+ LF +M+ ++P+ T A +
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC------------------------ 404
L + + + + + FV TAL+DM+AKC
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 405 --------GNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC-P 455
G++ SAR +FD +++V+ W+++I GY +GQ AI + M G P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
++VT I +L+AC H + G + +R I+ + Y ++ + R G L +A
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 516 MKMSIEPGVSVWGALLSA 533
+M E V + L +A
Sbjct: 457 DEMK-ERDVVSYNTLFTA 473
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 205/429 (47%), Gaps = 77/429 (17%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
ARK+FD+ S WN +I GY + +++ +M P+
Sbjct: 155 ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM------PEN------------ 196
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSI 226
DV ++ +AK ++ AR FD + +++VVSW ++
Sbjct: 197 ---------------------DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLD---WIALVSIVRAYGD-------VDDLEQGRS 276
+SGYAQNG +ALRLFN M V+ + W+ ++S D V +++ R
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRV 295
Query: 277 LHGCIIKMGFED--------------------EPDLLI--SLTAFYAKCGQVIVARSFFD 314
C +K D + +L+ ++ + Y + G + AR FD
Sbjct: 296 RLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFD 355
Query: 315 QMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITR-NIKPDSVTVRSAALASAQVGSLK 373
M +V+ WN++I+GYA NG A A++ F +MI + KPD VT+ S A + L+
Sbjct: 356 TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYG 433
L + DY+ K++ + +LI MYA+ GN+ A+ VFD E+DV+ ++ + +
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFA 475
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
+G G E +NL M+ G+ P+ VT+ +LTACN +GL++EG +F +R P +
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLAD 531
Query: 494 HYSCVVDLL 502
HY+C +DLL
Sbjct: 532 HYAC-MDLL 539
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 153/318 (48%), Gaps = 33/318 (10%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVD 151
T ++ G + + + ARK FD V WNA++ GY+++ + + ++ M R GV
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 152 PDGFTFPYVLKACT------------ELLD---FRLSCLVHGQVI--------------- 181
P+ T+ V+ AC+ +L+D RL+C V ++
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 182 --RYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
G ++ N +++ Y + G++ AR +FD + R VVSW S+I+GYA NG+A A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 240 LRLFNQMRN-TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
+ F M + D K D + ++S++ A G + DLE G + I K + SL
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 299 FYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
YA+ G + A+ FD+MK V+ +N + + +A NG E ++L +M I+PD VT
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 359 VRSAALASAQVGSLKLAQ 376
S A + G LK Q
Sbjct: 502 YTSVLTACNRAGLLKEGQ 519
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSN 133
+I N+L G + N +++G + +G + AR+LFD +V WN++I GY+ +
Sbjct: 320 RIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 134 LFRNTIEMYGLMRREG-VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
IE + M G PD T VL AC + D L + + + +
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK 252
L+ MYA+ GN+ A+ VFD + +R VVS+ ++ + +A NG+ +E L L ++M++ ++
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 253 LDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
D + S++ A L++G+ + I
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSI 525
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 45/323 (13%)
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
R FD + +V + N+M ++K A + + L+ + I PD+ + ++ +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAM 428
G L A V K + D +V ++DMY K +VESAR VFD+ S++ W+ M
Sbjct: 119 FGILFQA-----LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
I GY G EA L+ M + V V G +L + + F
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVK----------DLENARKYFDR 223
Query: 489 EPRNEHYSCVVDLLGRA--GYLDQA---YDFIMKMSIEPGVSVWGALLSACKIHRHVTLG 543
P S L G A G+ + A ++ ++++ + P + W ++SAC
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS-------- 275
Query: 544 EYAAKKLFSLDPYNTGHYVQLS-------NLYASSRLWDHVAHVRVLMREKGLSKDLGY- 595
F DP T V+L N + + L D A R + + + +LG
Sbjct: 276 -------FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ 328
Query: 596 -SVIEINGKLQVF-HVGDKSHPR 616
+++ N + + +GD S R
Sbjct: 329 RNLVTWNAMISGYTRIGDMSSAR 351
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 264/585 (45%), Gaps = 117/585 (20%)
Query: 32 IKHL-CSSSVLNLGHVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFL 90
IKH C S++++ G++ S+ H +L Y S + + + Q+H+ SG FL
Sbjct: 18 IKHSSCYSTLVSDGNIFSIQHFQSLMQKYESNL------KIIHQLHSHFTTSG-----FL 66
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRR--- 147
L++ N G + FL+N ++R YS + +Y ++R
Sbjct: 67 ---LLHQKQNSGKL---------------FLFNPLLRCYSLGETPLHAYFLYDQLQRLHF 108
Query: 148 -----EGVDP-DGFTFPYVLKACT--ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMY 199
+ + P D FT+ ++LKA + L +HG ++ GF V+VQ LV MY
Sbjct: 109 LSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMY 168
Query: 200 AKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
GN+ ++A ++F++M + + W ++
Sbjct: 169 LVGGNM-------------------------------IDAHKVFDEMPERN-PVTWNVMI 196
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
+ + GD + A F ++M
Sbjct: 197 TGLTNLGDFEK--------------------------------------ALCFLEKMPNR 218
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREMITRN-IKPDSVTVRSAALASAQVGSLKLAQWM 378
+V+ W +I GYA+ +EA+ LF M+ + IKP+ +T+ + A +G LK+ +
Sbjct: 219 TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSV 278
Query: 379 DDYVSKSEYAS-DIFVNTALIDMYAKCGNVESARIVFDR--TSEKDVIMWSAMIMGYGLH 435
YV K + DI V +LID YAKCG ++SA F K+++ W+ MI + +H
Sbjct: 279 HAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIH 338
Query: 436 GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGW-ELFHCM-RGFGIEPRNE 493
G G EA++++ M + G+ PN VT I +L AC+H GL E + E F+ M + I P +
Sbjct: 339 GMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVK 398
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSL 553
HY C+VD+L R G L++A +++ IE VW LL AC ++ L E +KL L
Sbjct: 399 HYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMEL 458
Query: 554 DPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVI 598
+ + G YV +SN++ + + R M +G++K G+S +
Sbjct: 459 ERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 207/430 (48%), Gaps = 22/430 (5%)
Query: 304 GQVIVARSFFDQMKT--SSVIMWNAMISGYAK---NGHAEEAVDLFREMITRNIKPDSVT 358
G + S Q KT S + N I + G+ EAV++ + + D +
Sbjct: 62 GHTLTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIR 121
Query: 359 VRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS 418
+ A + +L+ A+ + + + D+ A+I+MY+ C +V+ A VF+
Sbjct: 122 LLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMP 181
Query: 419 EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWE 478
E + M+ + +G G EAI+L+ ++ G PN F + + C +G V+EG
Sbjct: 182 EWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSL 241
Query: 479 LFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGALLSACKIH 537
F M R +GI P EHY V +L +G+LD+A +F+ +M +EP V VW L++ ++H
Sbjct: 242 QFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVH 301
Query: 538 RHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSV 597
V LG+ A+ + LD +L + +S+ L A V S+ YS
Sbjct: 302 GDVELGDRCAELVEKLDA------TRLDKV-SSAGLVATKASDFVKKEPSTRSEPYFYS- 353
Query: 598 IEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLN 657
F D SHP+ + IY + L +LKE+G+VP T + E +E +
Sbjct: 354 --------TFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIF 405
Query: 658 IHSERIAVAYGLISTAPGTILRITKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFK 717
+ E IAV L+ + P + + + N+R +CH ++KL+S + R++I RDA +H FK
Sbjct: 406 GYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFK 465
Query: 718 DGLCSCGDYW 727
+G+C C + W
Sbjct: 466 NGVCRCNNLW 475
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 249/571 (43%), Gaps = 89/571 (15%)
Query: 62 LIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFL 121
L+++S HL Q+H +LI SG + +L+ SS G Y ++ ++
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYC 85
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
N + + Y S+ + + GF F ++
Sbjct: 86 ANPVFKAYLVSSSPKQAL--------------GFYF---------------------DIL 110
Query: 182 RYGFGPDVFVQNGLVAMYAKC-----GNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
R+GF PD + L++ K G + + + G D+ + S++ Y G
Sbjct: 111 RFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC-DQVLPVQNSLMHMYTCCGAL 169
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
A +LF ++ D+ + W +++
Sbjct: 170 DLAKKLFVEIPKRDI-VSWNSII------------------------------------- 191
Query: 297 TAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
A + G V+ A FD+M ++I WN MIS Y + ++ LFREM+ + +
Sbjct: 192 -AGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNE 250
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T+ A + LK + + + ++ S + ++TALIDMY KC V AR +FD
Sbjct: 251 STLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS 310
Query: 417 TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
S ++ + W+ MI+ + LHG+ + L+ AM + P++VTF+G+L C +GLV +G
Sbjct: 311 LSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQG 370
Query: 477 WELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLS 532
+ M F I+P H C+ +L AG+ ++A + + + + P + W LLS
Sbjct: 371 QSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLS 430
Query: 533 ACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD 592
+ + + TLGE AK L DP N +Y L N+Y+ + W+ V VR +++E+ + +
Sbjct: 431 SSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRI 490
Query: 593 LGYSVIEINGKLQVFHVGDKSHPRSDEIYNE 623
G ++++ + +G K +++++ E
Sbjct: 491 PGCGLVDLKEIVHGLRLGCK---EAEKVFTE 518
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 172/334 (51%), Gaps = 14/334 (4%)
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
+I+MY+ C + + A VF+ +++ W MI +G+G AI+++ + G P
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCM-RGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
+ F + AC G + EG F M R +G+ E Y V+++L G+LD+A DF
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 515 IMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNL-YASSRL 573
+ +M++EP V +W L++ C + ++ LG+ A+ + LD + SN +++
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD---ASRMSKESNAGLVAAKA 324
Query: 574 WDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKE 633
D +R + +D + ++ F GD SH + + + L+ ++ +
Sbjct: 325 SDSAMEKLKELRYCQMIRD------DPKKRMHEFRAGDTSHLGT---VSAFRSLKVQMLD 375
Query: 634 IGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRITKNLRACVNCHSV 693
IGFVP T + EEKEE L S ++A A+ +I++ L + +N+R C++ H+
Sbjct: 376 IGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNT 435
Query: 694 IKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
K+IS + R +I RD ++H +K+G+CSC DYW
Sbjct: 436 FKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 238 EALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLT 297
EAL + + + + +D+ L+ + + G+V+ LE+ R +H CI + + ++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYHTVI 150
Query: 298 AFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
Y+ C A + F++M + W MI AKNG E A+D+F I KPD
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 358 TVRSAALASAQVGS-----LKLAQWMDDY---VSKSEYASDIFVNTALIDMYAKCGNVES 409
++ A +G L DY +S +Y + +I+M A CG+++
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVN-------VIEMLAACGHLDE 263
Query: 410 ARIVFDR-TSEKDVIMWSAMI 429
A +R T E V MW ++
Sbjct: 264 ALDFVERMTVEPSVEMWETLM 284
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 84/107 (78%)
Query: 621 YNEIQRLERRLKEIGFVPHTESVLHDLNYEEKEENLNIHSERIAVAYGLISTAPGTILRI 680
Y +++ L + +++ G+VP T+ VLHD++ E KE+ L HSER+A+A+G+I+T PGT +R+
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 681 TKNLRACVNCHSVIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727
KNLR C +CH+ IK++S + +REIIVRD RFHHF+DG CSCGDYW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 213/497 (42%), Gaps = 22/497 (4%)
Query: 59 YASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y SLI R +D+ + ++ G++ + + +V G S GH A FDE
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 116 HP----DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+ ++ II + ++ + M EG+D + ++ T + D +
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA----RVVFDGLNDRTVVSWTSII 227
+V ++ GF P V L+ +Y K G I A RV+ + + +++ +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+G+ + + A +F M +K D I +I+ A+ + ++++ + K+
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDL 343
+ + YAK G + + FD M+ +V +N +I+G + E+AV++
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 344 FREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAK 403
EM + + T A VG A + DIF AL+ K
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 404 CGNVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
G ++SA V S +++ +++ +I G+ G WEA +L M++ GV P+ T
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 460 FIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIM 516
+ ++AC+ +G + + M G++P + Y+ ++ RA ++A Y+ +
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 517 KMSIEPGVSVWGALLSA 533
M I+P +V+ LL++
Sbjct: 827 AMGIKPDKAVYHCLLTS 843
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 109/251 (43%), Gaps = 15/251 (5%)
Query: 296 LTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
+ FY + G + AR F++M+ T + ++ ++I YA +EA+ R+M
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
I+ VT ++ G + A + D + + + +I + + N+E A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 412 IVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
+ E+ + ++ M+ GY + + + ++ +++ G P VT+ L+
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 468 NHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF-----IMKMSIEP 522
G + + E+ M+ G++ + YS +++ G D A F ++K ++P
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN--GFVKLKDWANAFAVFEDMVKEGMKP 552
Query: 523 GVSVWGALLSA 533
V ++ ++SA
Sbjct: 553 DVILYNNIISA 563
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/337 (17%), Positives = 134/337 (39%), Gaps = 17/337 (5%)
Query: 211 VFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
F+ ++ + + ++ Y + G+ A F +MR + S++ AY D
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAF---YAKCGQVIVARSFFDQM----KTSSVIM 323
+++ S C+ KM E L++ + ++K G A +FD+ KT + +
Sbjct: 360 MDEALS---CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASI 416
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
+ +I + + + E A L REM I + V K + +
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 384 KSEYASDIFVNTALIDMYAKCGNV----ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGW 439
+ + + LI++Y K G + E +R++ + + ++ +S MI G+
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 440 EAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVV 499
A ++ M + G+ P+ + + +++A G + + M+ P + ++
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 500 DLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSA 533
++G + ++ +D + + P V + L++
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 244/561 (43%), Gaps = 87/561 (15%)
Query: 51 HGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKL 110
HG LD+ + + LD H ++ G + K++ G S + I A +L
Sbjct: 220 HGFVLDALFC----KGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRL 273
Query: 111 F----DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
D P+V + +I G+ + +++ +M + G++PD L A +
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-------LIAYST 326
Query: 167 LLD--FRLSCLVHG-----QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF-----DG 214
L+D F+ L G Q + G DV V + + +Y K G++ A VV+ G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 215 LNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
++ VV++T +I G Q+G EA ++ Q+ ++ + S++ + +L G
Sbjct: 387 ISP-NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 275 RSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSS----VIMWNAMI 328
+L+ +IKMG+ PD++I L +K G ++ A F +M S V+++N++I
Sbjct: 446 FALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVT----VRSAALASAQVGSLK--LAQWMDDYV 382
G+ + +EA+ +FR M IKPD T +R + + A +K + + D +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDR----TSEKDVIMWSAMIMGYGLHGQG 438
+++ ++DI V +I + KC +E A F+ E D++ ++ MI GY +
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 439 WE-----------------------------------AINLYHAMRQAGVCPNDVTFIGL 463
E AI ++ M + G PN VT+ L
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI---MKMSI 520
+ + S + ++LF M+ GI P YS ++D L + G +D+A + + +
Sbjct: 684 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKL 743
Query: 521 EPGVSVWGALLSA-CKIHRHV 540
P V + L+ CK+ R V
Sbjct: 744 LPDVVAYAILIRGYCKVGRLV 764
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 204/477 (42%), Gaps = 48/477 (10%)
Query: 147 REGVDPDGFT-FPYVLKA------CTELLDFRLSCLVHGQVIRYGFGPDVF----VQNGL 195
R G++P G + +VL A T+ LDF H V+ GF + V GL
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDF------HRLVMERGFRVGIVSCNKVLKGL 262
Query: 196 VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
+ + + +V D VV++ ++I+G+ + GE A LF M ++ D
Sbjct: 263 SVDQIEVAS-RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
IA +++ Y L G L + G + + + S Y K G + A + +
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 316 MK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
M + +V+ + +I G ++G EA ++ +++ R ++P VT S + G+
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR----IVFDRTSEKDVIMWSA 427
L+ + + + K Y D+ + L+D +K G + A + ++ +V+++++
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA-------CNHSGLVREGWELF 480
+I G+ + EA+ ++ M G+ P+ TF ++ C H G +LF
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLF 560
Query: 481 HCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF---IMKMSIEPGVSVWGALLSA-CKI 536
M+ I + V+ LL + ++ A F +++ +EP + + ++ C +
Sbjct: 561 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 537 HRHVTLGEYAAKKLFSL---DPY--NTGHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
R L E A+++F L P+ NT L ++ + D + +M EKG
Sbjct: 621 RR---LDE--AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 158/360 (43%), Gaps = 21/360 (5%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYAR----KLF 111
Y+SLID +L ++ +I G + + LV+G S G + +A K+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 112 DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK------ACT 165
+ +V ++N++I G+ R N F ++++ LM G+ PD TF V++ A
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 166 ELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF----DGLNDRTVV 221
+ + + + + R D+ V N ++ + KC I A F +G + +V
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
++ ++I GY EA R+F ++ T + + L ++ +D++ + +
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 282 IKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHA 337
+ G + L +++K + + F++M+ + S++ ++ +I G K G
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
+EA ++F + I + PD V +VG L A + +++ ++ D + AL
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 183/465 (39%), Gaps = 70/465 (15%)
Query: 59 YASLIDNSTHKRHLDQIH---NQLIVSGLKHNGFLITKLVN-----GSSNLGHICYARKL 110
Y++LID L H +Q + G+K + + + ++ G + Y R L
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 111 FDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDF 170
S P+V + +I+G + MYG + + G++P T+ ++ + +
Sbjct: 384 CQGIS-PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA---RVVFDGLNDR-TVVSWTSI 226
R ++ +I+ G+ PDV + LV +K G + A V G + R VV + S+
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQ------GRSLHGC 280
I G+ + EAL++F M +K D +++R D + G L
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYA---- 332
+ + + + + KC ++ A FF+ + ++ +N MI GY
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 333 -------------------------------KNGHAEEAVDLFREMITRNIKPDSVT--- 358
KN + A+ +F M + KP++VT
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 359 VRSAALASAQV-GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF--- 414
+ S + GS KL + M + + I + +ID K G V+ A +F
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQE----KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 415 -DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
D DV+ ++ +I GY G+ EA LY M + GV P+D+
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 212/509 (41%), Gaps = 51/509 (10%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITK---LVNGSSNLGHICYARKLFDEFS 115
Y++++D ++ L+ L S K G + +++G LG + A+ F
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
P V+ N +I G +E+ M + GV+PD T+ + K F
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG------FH 303
Query: 172 LSCLVHG--QVIR----YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR-----TV 220
L ++ G +VIR G PDV L+ + GNI M V+ + R ++
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
+ + ++SG + G EAL LFNQM+ + D +A ++ + + L+
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKNGH 336
+ +L + G ++ ARS D + +T ++++N +I GYAK+G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
EEA++LF+ +I I P T S + ++ A+ + D + A + T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQ-- 450
L+D YA CGN +S + + + + +S + G +GW+ N H +R+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL---CRGWKHENCNHVLRERI 600
Query: 451 -------------AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSC 497
G+ P+ +T+ ++ + + M+ ++ + Y+
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSV 526
++D L GY+ +A FI + E VS+
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQ-EQNVSL 688
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 182/479 (37%), Gaps = 72/479 (15%)
Query: 94 LVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
L+NG +G I A +L + + PD +N + +G+ + E+ M +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGF------------------------ 185
+ PD T+ +L +L + + ++ ++ GF
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 186 ------------GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT----SIISG 229
PD+ + ++ K G MA ++D + D+ ++ + +++ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
Q G LEA L + + ++ LD + ++ Y +E+ L +I+ G
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFR 345
SL Y K + AR D +K SV+ + ++ YA G+ + +L R
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 346 EMITRNIKPDSVTVRSAALASAQVG--------------SLKLAQWMDDYVSKSEYASDI 391
EM I P +VT S G K Q + D S+ I
Sbjct: 563 EMKAEGIPPTNVTY-SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 392 FVNTALIDMYAKCGNVESA----RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA 447
NT +I + ++ A I+ R + ++ +I ++G +A + ++
Sbjct: 622 TYNT-IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680
Query: 448 MRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM--RGFGIEPRNEHYSCVVDLLGR 504
+++ V + + L+ A G +LFH + RGF + R+ YS V++ L R
Sbjct: 681 LQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD--YSAVINRLCR 737
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 195/442 (44%), Gaps = 66/442 (14%)
Query: 120 FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHG- 178
FL +A++ Y+ + I+ + L R+ F ++ C LLD + G
Sbjct: 171 FLVDALMITYTDLGFIPDAIQCFRLSRKH-------RFDVPIRGCGNLLDRMMKLNPTGT 223
Query: 179 ------QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIIS 228
+++ GF +V+V N L+ + K GNI A+ VFD + R TVVS+ ++I+
Sbjct: 224 IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 229 GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
GY + G E RL +QM + + D +++ A + ++ L + K G
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIP 343
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLF 344
+ +L +++ G++ + + + +M + ++++N +++G+ KNG A ++
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
MI R ++PD +T T LID + +
Sbjct: 404 DGMIRRGLRPDKITY-----------------------------------TTLIDGFCRG 428
Query: 405 GNVESA---RIVFDRTS-EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
G+VE+A R D+ E D + +SA++ G G+ +A M +AG+ P+DVT+
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYL---DQAYDFIMK 517
++ A G + G++L M+ G P Y+ +++ L + G + D D ++
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 518 MSIEPGVSVWGALLSACKIHRH 539
+ + P + LL HRH
Sbjct: 549 IGVVPDDITYNTLLEGH--HRH 568
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 143/368 (38%), Gaps = 83/368 (22%)
Query: 78 QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSN 133
+++ +G N ++ L+N G+I A+K+FDE + P V +N +I GY +
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKA-----------------CTELL---DFRLS 173
+ M + PD FT+ ++ A C L D +
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 174 CLVHG---------------QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR 218
L+HG +++ G PD+ + N LV + K G++ AR + DG+ R
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 219 TV----VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
+ +++T++I G+ + G+ AL + +M ++LD
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD-------------------- 449
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISG 330
++GF +L K G+VI A +M + + + + M+
Sbjct: 450 --------RVGFS-------ALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW-MDDYVSKSEYAS 389
+ K G A+ L +EM + P VT ++G +K A +D ++
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 390 DIFVNTAL 397
DI NT L
Sbjct: 555 DITYNTLL 562
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 205/488 (42%), Gaps = 33/488 (6%)
Query: 49 LDHGLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHI 104
++ GL+ D F Y SLI ++ LD ++ N++ + G + N T L++G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG------L 298
Query: 105 CYAR----------KLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDG 154
C AR K+ D+ P V + +I+ S + + M G+ P+
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 155 FTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDG 214
T+ ++ + F + + GQ++ G P+V N L+ Y K G I A V +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 215 LNDRTVV----SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDD 270
+ R + ++ +I GY ++ +A+ + N+M V D + S++ +
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 271 LEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNA 326
+ L + G + S+ K +V A FD ++ +V+M+ A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 327 MISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE 386
+I GY K G +EA + +M+++N P+S+T + G LK A +++ + K
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVFDRT----SEKDVIMWSAMIMGYGLHGQGWEAI 442
+ +T LI K G+ + A F + ++ D ++ I Y G+ +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 443 NLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLL 502
++ MR+ GV P+ T+ L+ G +++ MR G EP + ++ L
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 503 GRAGYLDQ 510
Y Q
Sbjct: 718 LEMKYGKQ 725
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 189/462 (40%), Gaps = 48/462 (10%)
Query: 71 HLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHI----CYARKLFDEFSHPDVFLWNAII 126
+ Q++ +++ + N + K+VNG LG++ Y K+ + PD F + ++I
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 127 RGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI--RYG 184
GY + + +++ M +G + + + L+HG + R
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTH---------------LIHGLCVARRID 305
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFN 244
D+FV+ + D TV ++T +I + EAL L
Sbjct: 306 EAMDLFVK------------------MKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M T +K + ++ + E+ R L G +++ G +L Y K G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 305 QVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
+ A + M++ + +N +I GY K+ + +A+ + +M+ R + PD VT
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 361 SAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK 420
S + G+ A + ++ D + T++ID K VE A +FD +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 421 ----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREG 476
+V+M++A+I GY G+ EA + M PN +TF L+ G ++E
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 477 WELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
L M G++P + ++ L + G D AY +M
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/458 (18%), Positives = 180/458 (39%), Gaps = 29/458 (6%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIV---SGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y SLID + D + L + GL + + T +++ + A LFD
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
P+V ++ A+I GY ++ M M + P+ TF ++ +
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL----NDRTVVSWTSII 227
+ L+ ++++ G P V L+ K G+ A F + ++T+ I
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
Y + G L+A + +MR V D S+++ YGD+ + + G E
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
+SL +MK + + + V+L +M
Sbjct: 705 PSQHTFLSLIKHLL-------------EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKM 751
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE--YASDIFVNTALIDMYAKCG 405
+ ++ P++ + L +VG+L++A+ + D++ ++E S++ N L
Sbjct: 752 VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Query: 406 NVESARIVFDRTSEKDVIMWSA---MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIG 462
+ E+A++V D + + +I G G+ +++ + Q G +++ +
Sbjct: 812 HNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKI 871
Query: 463 LLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD 500
++ GLV +ELF+ M G + ++ YS +++
Sbjct: 872 IIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 21/294 (7%)
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVS 383
+N +++ A+ G +E ++ EM+ + P+ T ++G+++ A + YVS
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA---NQYVS 242
Query: 384 KSEYA---SDIFVNTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAMIMGYGLHG 436
K A D F T+LI Y + +++SA VF+ + ++ + ++ +I G +
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 437 QGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYS 496
+ EA++L+ M+ P T+ L+ + S E L M GI+P Y+
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 497 CVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSA-CK---IHRHVTLGEYAAKK 549
++D L ++A + + +M + P V + AL++ CK I V + E +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 550 LFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGK 603
L P NT Y +L Y S + + + ++ K L + Y+ + I+G+
Sbjct: 423 --KLSP-NTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL-IDGQ 472
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 114/509 (22%), Positives = 212/509 (41%), Gaps = 51/509 (10%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITK---LVNGSSNLGHICYARKLFDEFS 115
Y++++D ++ L+ L S K G + +++G LG + A+ F
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
P V+ N +I G +E+ M + GV+PD T+ + K F
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG------FH 303
Query: 172 LSCLVHG--QVIR----YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR-----TV 220
L ++ G +VIR G PDV L+ + GNI M V+ + R ++
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 221 VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGC 280
+ + ++SG + G EAL LFNQM+ + D +A ++ + + L+
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 281 IIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKNGH 336
+ +L + G ++ ARS D + +T ++++N +I GYAK+G
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 337 AEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA 396
EEA++LF+ +I I P T S + ++ A+ + D + A + T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 397 LIDMYAKCGNVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQ-- 450
L+D YA CGN +S + + + + +S + G +GW+ N H +R+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL---CRGWKHENCNHVLRERI 600
Query: 451 -------------AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSC 497
G+ P+ +T+ ++ + + M+ ++ + Y+
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNI 660
Query: 498 VVDLLGRAGYLDQAYDFIMKMSIEPGVSV 526
++D L GY+ +A FI + E VS+
Sbjct: 661 LIDSLCVYGYIRKADSFIYSLQ-EQNVSL 688
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/479 (20%), Positives = 182/479 (37%), Gaps = 72/479 (15%)
Query: 94 LVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
L+NG +G I A +L + + PD +N + +G+ + E+ M +G
Sbjct: 263 LINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKG 322
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGF------------------------ 185
+ PD T+ +L +L + + ++ ++ GF
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 186 ------------GPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWT----SIISG 229
PD+ + ++ K G MA ++D + D+ ++ + +++ G
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
Q G LEA L + + ++ LD + ++ Y +E+ L +I+ G
Sbjct: 443 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 502
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFR 345
SL Y K + AR D +K SV+ + ++ YA G+ + +L R
Sbjct: 503 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 562
Query: 346 EMITRNIKPDSVTVRSAALASAQVG--------------SLKLAQWMDDYVSKSEYASDI 391
EM I P +VT S G K Q + D S+ I
Sbjct: 563 EMKAEGIPPTNVTY-SVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 392 FVNTALIDMYAKCGNVESA----RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHA 447
NT +I + ++ A I+ R + ++ +I ++G +A + ++
Sbjct: 622 TYNT-IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680
Query: 448 MRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCM--RGFGIEPRNEHYSCVVDLLGR 504
+++ V + + L+ A G +LFH + RGF + R+ YS V++ L R
Sbjct: 681 LQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRD--YSAVINRLCR 737
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 183/420 (43%), Gaps = 41/420 (9%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTF-PYVLKACTELLDFRLSCLVHGQV 180
+N +I G+S++ +G MRR G ++F P + C + L F + V ++
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL-FDDAWGVTDEM 334
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEAL 240
+ G P N + G I AR + + VVS+ +++ GY + G+ +EA
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 241 RLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFY 300
LF+ +R D+ + +++ + +LE + L
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL----------------------- 431
Query: 301 AKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
Q+ VI + ++ G+ KNG+ A +++ EM+ + IKPD
Sbjct: 432 --------KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 361 SAALASAQVG-SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN----VESARIVFD 415
+ A+ ++G S K + ++ V+ +A D+ + ID K GN +E R +F
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 416 RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVRE 475
D + ++ +I GY +GQ A NLY M + + P+ +T+ L+ +G + +
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 476 GWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLS 532
++ M+ G+ P ++ ++ + +AG +D+AY ++ KM I P + L+S
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 110/551 (19%), Positives = 201/551 (36%), Gaps = 60/551 (10%)
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
Y++ ++ + + M R+G P VLK + + V+ +I +G P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYAQNGEALEALRLFN 244
V N ++ K G++ ++ + R + V++ +I+G+++NG+ EA R
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
MR + + + ++ Y + + ++ G G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
++ AR M V+ +N ++ GY K G EA LF ++ +I P VT +
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK---- 420
+ G+L+ AQ + + ++ D+ T L+ + K GN+ A V+D K
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 421 ------------------------------------DVIMWSAMIMGYGLHGQGWEAINL 444
D+ +++ I G G +AI
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGR 504
+ + G+ P+ VT+ ++ +G + L+ M + P Y ++ +
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 505 AGYLDQAYDFIMKMS---IEPGVSVWGALL-SACKIHRHVTLGEYAAKKLFSLDPYNTGH 560
AG L+QA+ + +M + P V ALL CK Y K P N
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYS 657
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
Y L + W+ V + M +K + D GY+ H H D
Sbjct: 658 YTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD-GYT-----------HRALFKHLEKDHE 705
Query: 621 YNEIQRLERRL 631
E++ LER L
Sbjct: 706 SREVEFLERLL 716
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 127/285 (44%), Gaps = 9/285 (3%)
Query: 100 NLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPY 159
+ G I AR+L + PDV +N ++ GY + F ++ +R + P T+
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 160 VLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT 219
++ E + + + ++ PDV LV + K GN+ MA V+D + +
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 220 V----VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSI-VRAYGDVDDLEQG 274
+ ++T+ G + G++ +A RL +M TD + + ++ + V +L +
Sbjct: 475 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 534
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISG 330
I ++G + ++ Y + GQ +AR+ +D+M SVI + +I G
Sbjct: 535 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 594
Query: 331 YAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
+AK G E+A EM R ++P+ +T + + G++ A
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 21/285 (7%)
Query: 94 LVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
L++G G++ A++L +E + PDV + +++G+ ++ E+Y M R+G
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Query: 150 VDPDGFTFPYVLKACTELL--DFRLSCLVHGQVIRYG-FGPDVFVQNGLVAMYAKCGN-- 204
+ PDG+ Y +A EL D + +H +++ PD+ + N + K GN
Sbjct: 475 IKPDGYA--YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 205 --IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
I R +F V++T++I GY +NG+ A L+++M + I ++
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC--GQVIVARSFFDQMKTSS 320
+ LEQ + K G P+++ Y C G + A + +M+
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGV--RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 321 V----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRS 361
+ + +IS EE V L++EM+ + I+PD T R+
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 98/227 (43%), Gaps = 11/227 (4%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF-----SHPDVFLWNAIIRG 128
+++++++ G+K +G+ T G LG A +L +E PD+ ++N I G
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+ IE + R G+ PD T+ V++ E F+++ ++ +++R P
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFN 244
V L+ +AK G + A + R V++ +++ G + G EA R
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+M + + + ++ D + E+ L+ ++ E EPD
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK--EIEPD 689
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/597 (21%), Positives = 233/597 (39%), Gaps = 96/597 (16%)
Query: 79 LIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNL 134
++ G+ + +L T +N G + A KLF + P+V +N +I G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ M G++P T+ ++K T + V ++ + GF P+V V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 195 LVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
L+ + + G++ A + D + + T ++ ++I GY +NG+A A RL +M +
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ----- 305
++ + S++ + G ++ LL +L + K G+
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 306 ----VIVARSFFDQMKTSSVIM------------------------------WNAMISGY 331
+ + F +TS+ ++ +N +ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASD 390
+EA EM+ R +KPD+ T + ++ A Q+ DD ++ D
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPD 609
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYH 446
++ + +ID K E + FD K+V ++++ +I Y G+ A+ L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAG 506
M+ G+ PN T+ L+ + V E LF MR G+EP HY+ ++D G+ G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 507 YLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
+ + + +M ++ P KI V +G YA
Sbjct: 730 QMVKVECLLREMHSKNVHPN-----------KITYTVMIGGYARD--------------- 763
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLS------KDLGYSVIEINGKLQVFHVGDKSH 614
N+ +SRL + MREKG+ K+ Y ++ G L+ F D+ +
Sbjct: 764 -GNVTEASRLLNE-------MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 126/597 (21%), Positives = 233/597 (39%), Gaps = 96/597 (16%)
Query: 79 LIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNL 134
++ G+ + +L T +N G + A KLF + P+V +N +I G
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 135 FRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNG 194
+ M G++P T+ ++K T + V ++ + GF P+V V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 195 LVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
L+ + + G++ A + D + + T ++ ++I GY +NG+A A RL +M +
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ----- 305
++ + S++ + G ++ LL +L + K G+
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 306 ----VIVARSFFDQMKTSSVIM------------------------------WNAMISGY 331
+ + F +TS+ ++ +N +ISG
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 332 AKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASD 390
+EA EM+ R +KPD+ T + ++ A Q+ DD ++ D
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD-CKRNGMLPD 609
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYH 446
++ + +ID K E + FD K+V ++++ +I Y G+ A+ L
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 447 AMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAG 506
M+ G+ PN T+ L+ + V E LF MR G+EP HY+ ++D G+ G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 507 YLDQAYDFIMKM---SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQ 563
+ + + +M ++ P KI V +G YA
Sbjct: 730 QMVKVECLLREMHSKNVHPN-----------KITYTVMIGGYARD--------------- 763
Query: 564 LSNLYASSRLWDHVAHVRVLMREKGLS------KDLGYSVIEINGKLQVFHVGDKSH 614
N+ +SRL + MREKG+ K+ Y ++ G L+ F D+ +
Sbjct: 764 -GNVTEASRLLNE-------MREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEEN 812
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/485 (21%), Positives = 207/485 (42%), Gaps = 28/485 (5%)
Query: 59 YASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y +++ LD +N ++I SG + N + T L+ A ++ E
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
PD+F +N++I G S++ M G+ P+ FT+ + E +F
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSII 227
+ ++ G P+ + GL+ Y K G + A + + D+ ++ ++T ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+G +N + +A +F +MR + D + ++ + + ++++ S+ +++ G
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 288 DEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAV 341
P+++I L + + G++ A+ D+M + + + +I GY K+G EA
Sbjct: 660 --PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 342 DLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMY 401
LF EM + + PDS + ++ ++ A + +K AS ALI+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 402 AKCGNVESARIV--------FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
K G E V FDR + + + ++ MI G A L+H M+ A +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
P +T+ LL + G E + +F GIEP + YS +++ + G +A
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 514 FIMKM 518
+ +M
Sbjct: 897 LVDQM 901
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 200/487 (41%), Gaps = 56/487 (11%)
Query: 46 VVSLDH-GLNLDS-FYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSN 100
+V +D G++LD+ Y+ LID R+ D + ++++ G+ ++ + S
Sbjct: 300 LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSK 359
Query: 101 LGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFT 156
G + A+ LFD P + ++I GY R R E+ M++ + +T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN 216
+ V+K D + + ++I G P+V + L+ + + G A V +
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 217 DRTVVS----WTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
++ + + S+I G ++ EA +M +K + + + Y + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA----RSFFDQMKTSSVIMWNAMI 328
+ + G L L Y K G+VI A RS DQ + ++
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
+G KN ++A ++FREM + I P
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAP---------------------------------- 625
Query: 389 SDIFVNTALIDMYAKCGNVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINL 444
D+F LI+ ++K GN++ A +FD E+ +VI+++ ++ G+ G+ +A L
Sbjct: 626 -DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGR 504
M G+ PN VT+ ++ SG + E + LF M+ G+ P + Y+ +VD R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 505 AGYLDQA 511
+++A
Sbjct: 745 LNDVERA 751
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 131/334 (39%), Gaps = 26/334 (7%)
Query: 51 HGLNLDSFYASLIDNSTHK----RHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICY 106
G+ D F ++ N K + I ++++ GL N + L+ G G I
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 107 ARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
A++L DE S HP+ + II GY +S ++ M+ +G+ PD F + ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV-- 220
C L D + + G + G N L+ K G + V + L D +
Sbjct: 741 GCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 221 ------VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
V++ +I + G A LF+QM+N ++ I S++ Y + +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 275 RSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS---------SVIMWN 325
+ I G E + + + + K G A DQM S+
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
A++SG+AK G E A + M+ PDS TV
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 182/424 (42%), Gaps = 26/424 (6%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR----L 172
P + ++ +I G + + + M GV D T+ ++ LL R
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG---LLKGRNADAA 331
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSIIS 228
LVH +++ +G ++ + + + +K G + A+ +FDG+ ++ ++ S+I
Sbjct: 332 KGLVH-EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 229 GYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
GY + + L +M+ ++ + ++V+ DL+ ++ +I G
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLF 344
+ +L + + + A +MK + +N++I G +K +EA
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA---SDIFVNTALIDMY 401
EM+ +KP++ T A S + + + A D YV + + + T LI+ Y
Sbjct: 511 VEMVENGLKPNAFTY--GAFISGYIEASEFAS-ADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 402 AKCGNVESA----RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
K G V A R + D+ D ++ ++ G + + +A ++ MR G+ P+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
++ L+ + G +++ +F M G+ P Y+ ++ R+G +++A + + +
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 518 MSIE 521
MS++
Sbjct: 688 MSVK 691
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 135/590 (22%), Positives = 243/590 (41%), Gaps = 116/590 (19%)
Query: 51 HGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKL 110
HG LD+ + + LD H ++ G + K++ G S + I A +L
Sbjct: 220 HGFVLDALFC----KGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRL 273
Query: 111 F----DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
D P+V + +I G+ + +++ +M + G++PD L A +
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD-------LIAYST 326
Query: 167 LLD--FRLSCLVHG-----QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVF-----DG 214
L+D F+ L G Q + G DV V + + +Y K G++ A VV+ G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 215 LNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQG 274
++ VV++T +I G Q+G EA ++ Q+ ++ + S++ + +L G
Sbjct: 387 ISP-NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 275 RSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTSS----VIMWNAMI 328
+L+ +IKMG+ PD++I L +K G ++ A F +M S V+++N++I
Sbjct: 446 FALYEDMIKMGYP--PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW----------- 377
G+ + +EA+ +FR M IKPD T + S G L+ A +
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 378 ------------------------MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIV 413
+ D + +++ ++DI V +I + KC +E A
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 414 FDR----TSEKDVIMWSAMIMGYGLHGQGWE----------------------------- 440
F+ E D++ ++ MI GY + E
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 441 ------AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
AI ++ M + G PN VT+ L+ + S + ++LF M+ GI P
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 495 YSCVVDLLGRAGYLDQAYDFI---MKMSIEPGVSVWGALLSA-CKIHRHV 540
YS ++D L + G +D+A + + + P V + L+ CK+ R V
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 166/419 (39%), Gaps = 64/419 (15%)
Query: 147 REGVDPDGFT-FPYVLKA------CTELLDFRLSCLVHGQVIRYGFGPDVF----VQNGL 195
R G++P G + +VL A T+ LDF H V+ GF + V GL
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDF------HRLVMERGFRVGIVSCNKVLKGL 262
Query: 196 VAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
+ + + +V D VV++ ++I+G+ + GE A LF M ++ D
Sbjct: 263 SVDQIEVAS-RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
IA +++ Y L G L + G + + + S Y K G + A + +
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 316 MK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
M + +V+ + +I G ++G EA ++ +++ R ++P VT S
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS---------- 431
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE----KDVIMWSA 427
LID + KCGN+ S +++ + DV+++
Sbjct: 432 -------------------------LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG 487
++ G G A+ M + N V F L+ E ++F M +G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 488 IEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSACKIHRHVTLG 543
I+P ++ V+ + G L++A + + KM +EP + L+ A H T+G
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 188/496 (37%), Gaps = 103/496 (20%)
Query: 59 YASLIDNSTHKRHLDQIH---NQLIVSGLKHNGFLITKLVN-----GSSNLGHICYARKL 110
Y++LID L H +Q + G+K + + + ++ G + Y R L
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 111 FDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDF 170
S P+V + +I+G + MYG + + G++P T+ ++ + +
Sbjct: 384 CQGIS-PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA---RVVFDGLNDR-TVVSWTSI 226
R ++ +I+ G+ PDV + LV +K G + A V G + R VV + S+
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
I G+ + EAL++F M +K D +++R LE+ L + KMG
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 287 EDEPDLLISLTAFYA-------------------------------------KCGQVIVA 309
E PD L T A KC ++ A
Sbjct: 563 E--PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 620
Query: 310 RSFFDQM----KTSSVIMWNAMISGYA--------------------------------- 332
FF+ + ++ +N MI GY
Sbjct: 621 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 333 --KNGHAEEAVDLFREMITRNIKPDSVT---VRSAALASAQV-GSLKLAQWMDDYVSKSE 386
KN + A+ +F M + KP++VT + S + GS KL + M +
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE----KG 736
Query: 387 YASDIFVNTALIDMYAKCGNVESARIVF----DRTSEKDVIMWSAMIMGYGLHGQGWEAI 442
+ I + +ID K G V+ A +F D DV+ ++ +I GY G+ EA
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 443 NLYHAMRQAGVCPNDV 458
LY M + GV P+D+
Sbjct: 797 LLYEHMLRNGVKPDDL 812
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 163/391 (41%), Gaps = 54/391 (13%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYAR----KLF 111
Y+SLID +L ++ +I G + + LV+G S G + +A K+
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 112 DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+ +V ++N++I G+ R N F ++++ LM G+ PD TF V++ +++ R
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR--VSIMEGR 546
Query: 172 L--SCLVHGQVIRYGFGPD-----------------------------------VFVQNG 194
L + + ++ + G PD + V N
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 195 LVAMYAKCGNIGMARVVF----DGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
++ + KC I A F +G + +V++ ++I GY EA R+F ++ T
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
+ + L ++ +D++ + + + G + L +++K + +
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 311 SFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
F++M+ + S++ ++ +I G K G +EA ++F + I + PD V
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
+VG L A + +++ ++ D + AL
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 186/450 (41%), Gaps = 70/450 (15%)
Query: 105 CYARKLFDEFS----------HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDG 154
C RK+ D F P++ +N +I G R + + M R G D
Sbjct: 251 CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 155 FTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDG 214
T+ ++K + +F + ++H +++R+G P V L+ K GN+ A D
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 215 L-------NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
+ N+RT +T+++ G++Q G EA R+ +M + + +++ +
Sbjct: 371 MRVRGLCPNERT---YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 268 VDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAM 327
+E ++ + + G PD V+ ++ +
Sbjct: 428 TGKMEDAIAVLEDMKEKGL--SPD-----------------------------VVSYSTV 456
Query: 328 ISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY 387
+SG+ ++ +EA+ + REM+ + IKPD++T S + K A + + + +
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 388 ASDIFVNTALIDMYAKCGNVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAIN 443
D F TALI+ Y G++E A + + EK DV+ +S +I G + EA
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 444 LYHAMRQAGVCPNDVTFIGLLTACNH---------------SGLVREGWELFHCMRGFGI 488
L + P+DVT+ L+ C++ G++ E ++F M G
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 489 EPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
+P Y+ ++ RAG + +AY +M
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 199/494 (40%), Gaps = 61/494 (12%)
Query: 61 SLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH---- 116
SLID + HL Q H + L +N L + + +I +A +F E
Sbjct: 148 SLIDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKR----NISFAENVFKEMLESQVS 202
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P+VF +N +IRG+ + + ++ M +G CL
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKG------------------------CL- 237
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIG-----MARVVFDGLNDRTVVSWTSIISGYA 231
P+V N L+ Y K I + + GL + ++S+ +I+G
Sbjct: 238 ----------PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL-EPNLISYNVVINGLC 286
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+ G E + +M LD + ++++ Y + Q +H +++ G
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSSVI----MWNAMISGYAKNGHAEEAVDLFREM 347
SL K G + A F DQM+ + + ++ G+++ G+ EA + REM
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV 407
P VT + G ++ A + + + + + D+ + ++ + + +V
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 408 ESA----RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
+ A R + ++ + D I +S++I G+ + EA +LY M + G+ P++ T+ L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE-- 521
+ A G + + +L + M G+ P YS +++ L + +A ++K+ E
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 522 -PGVSVWGALLSAC 534
P + L+ C
Sbjct: 587 VPSDVTYHTLIENC 600
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 142/345 (41%), Gaps = 86/345 (24%)
Query: 304 GQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTV 359
G + VA + FD+M+T +V+ +N +I GY K ++ L R M + ++P+ ++
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 360 RSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
+ G +K ++ +++ Y+ D
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLD----------------------------- 309
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+ ++ +I GY G +A+ ++ M + G+ P+ +T+ L+ + +G + E
Sbjct: 310 --EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLSACKI 536
MR G+ P Y+ +VD + GY+++AY + +M+ P V + AL++
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN---- 423
Query: 537 HRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKD-LGY 595
GH V + ++ D +A V M+EKGLS D + Y
Sbjct: 424 ----------------------GHCV-------TGKMEDAIA-VLEDMKEKGLSPDVVSY 453
Query: 596 SVIEINGKLQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHT 640
S + ++G + + V +E R++R + E G P T
Sbjct: 454 STV-LSGFCRSYDV------------DEALRVKREMVEKGIKPDT 485
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 170/410 (41%), Gaps = 42/410 (10%)
Query: 45 HVVSLDHGLNLDSF-YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSN 100
H L HGL Y SLI + +++ + +Q+ V GL N T LV+G S
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 101 LGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFT 156
G++ A ++ E + P V +NA+I G+ + + I + M+ +G+ PD +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD--- 213
+ VL D + V +++ G PD + L+ + + A +++
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 214 --GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDL 271
GL ++T++I+ Y G+ +AL+L N+M V D + ++
Sbjct: 513 RVGLPPDEF-TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 272 EQGRSLHGCIIKMGFED------------------EPDLLISLTAFYAKCGQVIVARSFF 313
+ + L ++K+ +E+ E ++SL + G + A F
Sbjct: 572 REAKRL---LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 314 DQM----KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQV 369
+ M +N MI G+ + G +A L++EM+ +VTV + A +
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE 688
Query: 370 GSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE 419
G + + +V +S S+ L+++ + GN++ +V D +E
Sbjct: 689 GKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD---VVLDVLAE 735
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/367 (18%), Positives = 142/367 (38%), Gaps = 69/367 (18%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVSGLKHNGF---LIT--KLVNGSSNLGHICYARKLFDE 113
Y +L+D + K ++++ + ++ + NGF ++T L+NG G + A + ++
Sbjct: 383 YTTLVDGFSQKGYMNEAYR--VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 114 FSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD 169
PDV ++ ++ G+ RS + + M +G+ PD T+ +++ E
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 170 FRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA-------------------RV 210
+ +C ++ +++R G PD F L+ Y G++ A V
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 211 VFDGLNDRTVV-----------------------------------SWTSIISGYAQNGE 235
+ +GLN ++ S S+I G+ G
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 236 ALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS 295
EA ++F M + K D A ++ + D+ + +L+ ++K GF +I+
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680
Query: 296 LTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
L K G+V S + + S ++ + G+ + +D+ EM
Sbjct: 681 LVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Query: 352 IKPDSVT 358
P+ ++
Sbjct: 741 FLPNGIS 747
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 177/406 (43%), Gaps = 13/406 (3%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PDV ++ ++ GY R ++ +M+R+G+ P+ + + ++ + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQ 232
++IR G PD V L+ + K G+I A F ++ R V+++T+IISG+ Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
G+ +EA +LF++M ++ D + ++ Y ++ +H +I+ G
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 293 LISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+L K G + A +M ++ +N++++G K+G+ EEAV L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ D+VT + A + G + AQ + + I L++ + G +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 409 SARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
+ + K + +++++ Y + A +Y M GV P+ T+ L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 465 TACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD-LLGRAGYLD 509
+ ++E W LF M+G G YS ++ L R +L+
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 187/419 (44%), Gaps = 17/419 (4%)
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
V+S++++++GY + GE + +L M+ +K + SI+ + L +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNG 335
+I+ G + + +L + K G + A FF +M T V+ + A+ISG+ + G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
EA LF EM + ++PDSVT + G +K A + +++ ++ + ++ T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 396 ALIDMYAKCGNVESARIVFDRT----SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
LID K G+++SA + + ++ +++++ G G EA+ L A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYL--- 508
G+ + VT+ L+ A SG + + E+ M G G++P ++ +++ G L
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 509 DQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH-YVQLSNL 567
++ ++++ I P + + +L+ I ++ K + S G Y L
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 568 YASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
+ +R + M+ KG S + + I G L+ K + E++++++R
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK-----RKKFLEAREVFDQMRR 694
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 16/297 (5%)
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
T VI ++ +++GY + G ++ L M + +KP+S S ++ L A+
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF----DRTSEKDVIMWSAMIMGYG 433
+ + D V T LID + K G++ +A F R DV+ ++A+I G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
G EA L+H M G+ P+ VTF L+ +G +++ + + + M G P
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 494 HYSCVVDLLGRAGYLDQAYDFI---MKMSIEPGVSVWGALLSA-CK---IHRHVTL-GEY 545
Y+ ++D L + G LD A + + K+ ++P + + ++++ CK I V L GE+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 546 AAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING 602
A L + +T Y L + Y S D + M KGL + + +NG
Sbjct: 518 EAAGLNA----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 163/401 (40%), Gaps = 45/401 (11%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRG 128
++ +++I G+ + + T L++G G I A K F E PDV + AII G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+ + +++ M +G++PD TF ++ + + + VH +I+ G P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFD-----GLNDRTVVSWTSIISGYAQNGEALEALRLF 243
V L+ K G++ A + GL + ++ SI++G ++G EA++L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 244 NQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC 303
+ + D + +++ AY ++++ + + ++ G +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ---------------- 558
Query: 304 GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
+++ +N +++G+ +G E+ L M+ + I P++ T S
Sbjct: 559 ---------------PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK--- 420
+LK A + + D L+ + K N++ A +F K
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 421 -DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
V +S +I G+ + EA ++ MR+ G+ + F
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 177/406 (43%), Gaps = 13/406 (3%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PDV ++ ++ GY R ++ +M+R+G+ P+ + + ++ + +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQ 232
++IR G PD V L+ + K G+I A F ++ R V+++T+IISG+ Q
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
G+ +EA +LF++M ++ D + ++ Y ++ +H +I+ G
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 293 LISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKNGHAEEAVDLFREMI 348
+L K G + A +M ++ +N++++G K+G+ EEAV L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ D+VT + A + G + AQ + + I L++ + G +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 409 SARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
+ + K + +++++ Y + A +Y M GV P+ T+ L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 465 TACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD-LLGRAGYLD 509
+ ++E W LF M+G G YS ++ L R +L+
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 187/419 (44%), Gaps = 17/419 (4%)
Query: 220 VVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHG 279
V+S++++++GY + GE + +L M+ +K + SI+ + L +
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 280 CIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNG 335
+I+ G + + +L + K G + A FF +M T V+ + A+ISG+ + G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
EA LF EM + ++PDSVT + G +K A + +++ ++ + ++ T
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 396 ALIDMYAKCGNVESARIVFDRT----SEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
LID K G+++SA + + ++ +++++ G G EA+ L A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYL--- 508
G+ + VT+ L+ A SG + + E+ M G G++P ++ +++ G L
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 509 DQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH-YVQLSNL 567
++ ++++ I P + + +L+ I ++ K + S G Y L
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 568 YASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
+ +R + M+ KG S + + I G L+ K + E++++++R
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK-----RKKFLEAREVFDQMRR 694
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 135/297 (45%), Gaps = 16/297 (5%)
Query: 318 TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
T VI ++ +++GY + G ++ L M + +KP+S S ++ L A+
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF----DRTSEKDVIMWSAMIMGYG 433
+ + D V T LID + K G++ +A F R DV+ ++A+I G+
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
G EA L+H M G+ P+ VTF L+ +G +++ + + + M G P
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 494 HYSCVVDLLGRAGYLDQAYDFI---MKMSIEPGVSVWGALLSA-CK---IHRHVTL-GEY 545
Y+ ++D L + G LD A + + K+ ++P + + ++++ CK I V L GE+
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 546 AAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEING 602
A L + +T Y L + Y S D + M KGL + + +NG
Sbjct: 518 EAAGLNA----DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/401 (19%), Positives = 163/401 (40%), Gaps = 45/401 (11%)
Query: 73 DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRG 128
++ +++I G+ + + T L++G G I A K F E PDV + AII G
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+ + +++ M +G++PD TF ++ + + + VH +I+ G P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFD-----GLNDRTVVSWTSIISGYAQNGEALEALRLF 243
V L+ K G++ A + GL + ++ SI++G ++G EA++L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP-NIFTYNSIVNGLCKSGNIEEAVKLV 514
Query: 244 NQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC 303
+ + D + +++ AY ++++ + + ++ G +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ---------------- 558
Query: 304 GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
+++ +N +++G+ +G E+ L M+ + I P++ T S
Sbjct: 559 ---------------PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK--- 420
+LK A + + D L+ + K N++ A +F K
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 421 -DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
V +S +I G+ + EA ++ MR+ G+ + F
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 161/357 (45%), Gaps = 20/357 (5%)
Query: 195 LVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
+++M K G + A +F+GL + V S+TS+IS +A +G EA+ +F +M
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV-- 308
K I I+ +G + + + KM + + C + +
Sbjct: 239 CKPTLITYNVILNVFGKMGT--PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 309 -ARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
A F++MK + + +NA++ Y K+ +EA+ + EM+ P VT S
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLI 356
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS----E 419
A A+ G L A + + +++ D+F T L+ + + G VESA +F+ +
Sbjct: 357 SAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCK 416
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
++ ++A I YG G+ E + ++ + G+ P+ VT+ LL +G+ E +
Sbjct: 417 PNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGV 476
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSA 533
F M+ G P E ++ ++ R G +QA Y ++ + P +S + +L+A
Sbjct: 477 FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 214/510 (41%), Gaps = 42/510 (8%)
Query: 59 YASLIDNSTHKRHLDQIHNQLIVS-------GLKHNGFLI-----TKLVNGSSNLGHICY 106
Y S++DNS + + + VS GL+ +GF + T L++ +N G
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 107 A----RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTI-EMYGLMRREGVDPDGFTFPYVL 161
A +K+ ++ P + +N I+ + + N I + M+ +G+ PD +T+ ++
Sbjct: 227 AVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI 286
Query: 162 KACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA-----RVVFDGLN 216
C + + V ++ GF D N L+ +Y K A +V +G +
Sbjct: 287 TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 217 DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRS 276
++V++ S+IS YA++G EA+ L NQM K D +++ + +E S
Sbjct: 347 P-SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 277 LHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYA 332
+ + G + + Y G+ FD++ + ++ WN +++ +
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
+NG E +F+EM P+ T + A ++ GS + A + + + D+
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 393 VNTALIDMYAKCGNVESARIVF----DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAM 448
++ A+ G E + V D + + + + +++ Y G E I L H++
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY---ANGKE-IGLMHSL 581
Query: 449 RQ---AGVC-PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGR 504
+ +GV P V L+ C+ L+ E F ++ G P + +V + GR
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR 641
Query: 505 AGYLDQA---YDFIMKMSIEPGVSVWGALL 531
+ +A D++ + P ++ + +L+
Sbjct: 642 RQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/477 (20%), Positives = 202/477 (42%), Gaps = 56/477 (11%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y SLI LD+ + NQ+ G K + F T L++G G + A +F+E
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTEL-LDF 170
+ P++ +NA I+ Y F ++++ + G+ PD T+ +L + +D
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSI 226
+S V ++ R GF P+ N L++ Y++CG+ A V+ + D V ++ ++
Sbjct: 472 EVSG-VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF 286
++ A+ G ++ ++ +M + K + + S++ AY + ++ SL +
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 287 EDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVD 342
E LL +L +KC + A F ++K + + N+M+S Y +
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGR--------- 641
Query: 343 LFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYA 402
R+M+ + A + DY+ + + + +L+ M++
Sbjct: 642 --RQMVAK------------------------ANGVLDYMKERGFTPSMATYNSLMYMHS 675
Query: 403 KCGNV----ESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
+ + E R + + + D+I ++ +I Y + + +A ++ MR +G+ P+ +
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 459 TFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
T+ + + + E + M G P Y+ +VD + D+A F+
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 91/220 (41%), Gaps = 14/220 (6%)
Query: 107 ARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE 166
A +++ P L ++ S+ +L + ++ G PD T L +
Sbjct: 582 AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT----LNSMVS 637
Query: 167 LLDFRLSCLVHGQVIRY----GFGPDVFVQNGLVAMYAKCGNIG-----MARVVFDGLND 217
+ R V+ Y GF P + N L+ M+++ + G + ++ G+
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 218 RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
++S+ ++I Y +N +A R+F++MRN+ + D I + + +Y E+ +
Sbjct: 698 -DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK 317
+IK G + S+ Y K + A+ F + ++
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 191/446 (42%), Gaps = 20/446 (4%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEF----SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
++ L+NG + I A L D+ P+ +N +I G N + + M
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIG 206
G PD FT+ V+ + D L+ + ++ + DV + ++ N+
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 207 MARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
A +F ++++ VV++ S+I G +A RL + M + + + +++
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVARSFFDQMKTS- 319
A+ L + L+ +IK + PD+ SL + ++ A+ F+ M +
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 320 ---SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
+V+ +N +I G+ K EE ++LFREM R + ++VT + Q G +AQ
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAMIMGY 432
+ + DI + L+D K G +E A +VF+ E D+ ++ MI G
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
G+ + +L+ ++ GV PN + + +++ GL E LF M+ G P +
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKM 518
Y+ ++ R G + + I +M
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEM 596
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/502 (20%), Positives = 205/502 (40%), Gaps = 60/502 (11%)
Query: 84 LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
L N L KL + G + +R L P + +N ++ ++ N F I +
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPL------PSIVEFNKLLSAIAKMNKFDLVISLGE 104
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
M+ + D +++ ++ L+ V G++++ G+ PD+ + L+ Y
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 204 NIGMARVVFDGL----NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
I A + D + V++ ++I G + +A EA+ L ++M + D
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG--QVIVARSFFDQMK 317
++V D++ SL + K E D++I T A C V A + F +M
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIE--ADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 318 TS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLK 373
+V+ +N++I G +A L +MI R I P+ VT + A + G L
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 374 LAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD----VIMWSAMI 429
A+ + D + K DIF ++LI+ + ++ A+ +F+ KD V+ ++ +I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 430 MGYGLHGQGWEAINLYHAMRQAG-----------------------------------VC 454
G+ + E + L+ M Q G V
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
P+ +T+ LL G + + +F ++ +EP Y+ +++ + +AG ++ +D
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 515 IMKMS---IEPGVSVWGALLSA 533
+S ++P V ++ ++S
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISG 544
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 145/332 (43%), Gaps = 12/332 (3%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
++V + ++S A+ + + L +M+N + D + ++ + L ++
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM----KTSSVIMWNAMISGYAKN 334
G ++K+G+E + L SL Y ++ A + DQM + + +N +I G +
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN 394
A EAV L M+ R +PD T + + G + LA + + K + +D+ +
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 395 TALIDMYAKCGNVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
T +ID NV A +F K +V+ ++++I +G+ +A L M +
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQ 510
+ PN VTF L+ A G + E +L+ M I+P YS +++ LD+
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 511 A---YDFIMKMSIEPGVSVWGALLSA-CKIHR 538
A ++ ++ P V + L+ CK R
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/316 (17%), Positives = 133/316 (42%), Gaps = 50/316 (15%)
Query: 59 YASLIDNSTHKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--- 112
+++LID + L +++++++I + + F + L+NG + A+ +F+
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 113 -EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+ P+V +N +I+G+ ++ +E++ M + G+ + T+ +++ + D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSII 227
++ + +++ G PD+ + L+ K G + A VVF+ L + + ++ +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
G + G+ + LF + VK + I +++ + + G +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF----------------CRKGLK 551
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI----MWNAMISGYAKNGHAEEAVDL 343
+E D L F +MK + +N +I ++G + +L
Sbjct: 552 EEADAL-------------------FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 344 FREMITRNIKPDSVTV 359
+EM + D+ T+
Sbjct: 593 IKEMRSCGFVGDASTI 608
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
++AVDLF EM+ P V A A++ L + + + + D++ L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 398 IDMYAKCGNVESARIVFDRTS----EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGV 453
I+ + + + A V + E D++ S+++ GY + EA+ L M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 454 CPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYD 513
PN VTF L+ E L M G +P Y VV+ L + G +D A
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 514 FIMKM---SIEPGVSVWGALLSACKIHRHV 540
+ KM IE V ++ ++ A +++V
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 194/418 (46%), Gaps = 19/418 (4%)
Query: 66 STHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS----HPD 118
+ +R +D +I +++ SG+K + +T +V G G + ++KL EFS P+
Sbjct: 199 AKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE 258
Query: 119 VFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHG 178
+ +N II Y + F + +M+++GV + T+ +++ + + +
Sbjct: 259 AYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFD 318
Query: 179 QVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNG 234
++ G DV V L++ + GN+ A ++FD L ++ + ++ ++I G + G
Sbjct: 319 EMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVG 378
Query: 235 EALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
E A L N+M++ V + + +++ Y +++ ++ + + GF+ +
Sbjct: 379 EMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCN 438
Query: 295 SLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
++ + + + + A+ + +M S + + +I Y K G+ EEA LF EM ++
Sbjct: 439 TIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK 498
Query: 351 NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
++P+++T A + G +K A+ + + + D + T+LI NV+ A
Sbjct: 499 GVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEA 558
Query: 411 RIVFDRTS----EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
+F +++ + ++ MI G G+ EA LY M++ G ++ + L+
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 139/347 (40%), Gaps = 45/347 (12%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
TV S T ++ G + GE ++ +L + +K + +I+ AY D +
Sbjct: 223 TVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT----SSVIMWNAMISGYAKN 334
+ K G L K G++ A FD+M+ S V ++ ++IS +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ-WMDDYVSKSEYASDIFV 393
G+ + A LF E+ + + P S T + +VG + A+ M++ SK + +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 394 NTALIDMYAKCGNVESARIVFDRTSEK--------------------------------- 420
NT LID Y + G V+ A +++D +K
Sbjct: 403 NT-LIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 421 ------DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVR 474
+ ++ +I Y G EA L+ M GV PN +T+ ++ A G ++
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 475 EGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
E +L M G++P + Y+ ++ A +D+A +M ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK 568
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 120/293 (40%), Gaps = 11/293 (3%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y SLI + K ++ + + ++L GL + + L++G +G + A L +E
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 116 HPDV----FLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
V ++N +I GY R + +Y +M ++G D FT + L +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSII 227
+ +++ G L+ +Y K GN+ A+ +F ++ + V +++ +I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
Y + G+ EA +L M + D S++ D++++ L + G +
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEA 340
+ + +K G+ A +D+MK + N + + + H+ E
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHSPET 624
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 198/485 (40%), Gaps = 75/485 (15%)
Query: 81 VSGLKHNGFLITKLVNGSSNLGHICYARK--LFDEFS----------HPDVFLWNAIIRG 128
++G++H+ + +T ++N CY RK L FS PD ++ ++ G
Sbjct: 98 LNGIEHDMYTMTIMIN--------CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNG 149
Query: 129 YSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPD 188
+ + + M PD T ++ + ++ +++ YGF PD
Sbjct: 150 FCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD 209
Query: 189 VFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFN 244
++ K GN +A +F + +R +VV ++ +I ++G +AL LFN
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 245 QMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG 304
+M +K D + S++ + + G AK
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDG--------------------------AKML 303
Query: 305 QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
+ ++ R+ V+ ++A+I + K G EA +L+ EMITR I PD++T S
Sbjct: 304 REMIGRNII-----PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 365 ASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK---- 420
+ L A M D + DI + LI+ Y K V+ +F S K
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
+ I ++ +++G+ G+ A L+ M GV P+ VT+ LL +G + + E+F
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 481 HCMR------GFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALL 531
M+ G GI Y+ ++ + A +D A+ +S ++P V + ++
Sbjct: 479 EKMQKSRMTLGIGI------YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 532 SA-CK 535
CK
Sbjct: 533 GGLCK 537
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 176/418 (42%), Gaps = 20/418 (4%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P +N + +R+ + + M G++ D +T ++ + V
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT----VVSWTSIISGYAQ 232
G+ + G+ PD + LV + G + A + D + + +V+ +++I+G
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 233 NGEALEALRLFNQMRNTDVKLDWIA----LVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
G EAL L ++M + D + L + ++ L+ R + IK
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLF 344
++ SL K G A S F++M+ + V+ ++++I G +G ++ +
Sbjct: 248 YSIVIDSL----CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
REMI RNI PD VT + + G L A+ + + + A D +LID + K
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 405 GNVESARIVFD----RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
+ A +FD + E D++ +S +I Y + + + L+ + G+ PN +T+
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
L+ SG + ELF M G+ P Y ++D L G L++A + KM
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 177/431 (41%), Gaps = 22/431 (5%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
++ L+NG G + A L D PD + ++ +S ++++ M
Sbjct: 178 VSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME 237
Query: 147 REGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGN-- 204
+ + V+ + + F + + ++ G DV + L+ G
Sbjct: 238 ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWD 297
Query: 205 --IGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
M R + VV+++++I + + G+ LEA L+N+M + D I S++
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 263 RAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLIS--LTAFYAKCGQVIVARSFFDQMKTS- 319
+ + L + + ++ G E PD++ L Y K +V F ++ +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCE--PDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 320 ---SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
+ I +N ++ G+ ++G A +LF+EM++R + P VT G L A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF----DRTSEKDVIMWSAMIMGY 432
+ + + KS I + +I V+ A +F D+ + DV+ ++ MI G
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA-CNHSGLVREGWELFHCMRGFGIEPR 491
G EA L+ M++ G P+D T+ L+ A SGL+ EL M+ G
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEMKVCGFSAD 594
Query: 492 NEHYSCVVDLL 502
+ V+D+L
Sbjct: 595 SSTIKMVIDML 605
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 138/334 (41%), Gaps = 16/334 (4%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
T + + + S A+ + L M ++ D + ++ Y L S+
Sbjct: 69 TPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKC--GQVIVARSFFDQM----KTSSVIMWNAMISGYA 332
G K+G+ EPD + T C G+V A + D+M + ++ + +I+G
Sbjct: 129 GRAWKLGY--EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLC 186
Query: 333 KNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIF 392
G EA+ L M+ +PD VT + G+ LA + + + + +
Sbjct: 187 LKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVV 246
Query: 393 VNTALIDMYAKCGNVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAM 448
+ +ID K G+ + A +F+ K DV+ +S++I G G+ + + M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 449 RQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYL 508
+ P+ VTF L+ G + E EL++ M GI P Y+ ++D + L
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 509 ---DQAYDFIMKMSIEPGVSVWGALL-SACKIHR 538
+Q +D ++ EP + + L+ S CK R
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/502 (21%), Positives = 212/502 (42%), Gaps = 18/502 (3%)
Query: 107 ARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
A LFDE PD + ++ +I + + +F + + M ++ V D + +++
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV-- 220
L D+ + + ++ R G PD+ N ++ +Y K AR++ +N+ V
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 221 --VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
VS+++++S Y +N + LEAL +F +M+ + LD ++ YG +D +++ L
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKN 334
+ KM E ++ Y + A F M+ +V+ +N MI Y K
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN 394
E+A +L +EM +R I+P+++T + + G L A + + S D +
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 395 TALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVC 454
+I Y + G + A+ + D I I G+ EA ++ ++G
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
+ F ++ + + E+F MR G P + + V++ G+ ++A
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 515 IMKMSIEPGV---SVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQL--SNLYA 569
+M E V V +LS + + E ++L S DP + L + LY
Sbjct: 594 YREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLES-DPNVNSKELHLVVAALYE 652
Query: 570 SSRLWDHVAHVRVLMREKGLSK 591
+ + + V MRE+G+ K
Sbjct: 653 RADKLNDASRVMNRMRERGILK 674
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 187/457 (40%), Gaps = 25/457 (5%)
Query: 185 FGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSIISGYAQNGEALEAL 240
+ P VF N ++ + +A +FD + R + +++++I+ + + G AL
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 241 RLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTA 298
+M V D + +++ + D + S+ + + G PDL+ S+
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGIT--PDLVAYNSMIN 268
Query: 299 FYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
Y K AR +M + V + ++ ++S Y +N EA+ +F EM N
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 355 DSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA---- 410
D T Q+ +K A + + K + ++ ++ +Y + A
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLF 388
Query: 411 RIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
R++ + E++V+ ++ MI YG + +A NL M+ G+ PN +T+ +++ +
Sbjct: 389 RLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKA 448
Query: 471 GLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
G + LF +R G+E Y ++ R G + A + ++ + + A+
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI 508
Query: 531 LSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGLS 590
K R + S + + + + NLY+ ++ + +V V MR G
Sbjct: 509 TILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYF 568
Query: 591 KDLGYSVIEIN--GKLQVFHVGDKSHPRSDEIYNEIQ 625
D + +N GK + F ++D +Y E+Q
Sbjct: 569 PDSNVIAMVLNAYGKQREFE-------KADTVYREMQ 598
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 115/577 (19%), Positives = 243/577 (42%), Gaps = 77/577 (13%)
Query: 84 LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
L NG KL + + G + +R P + ++ ++ ++ N F I +
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPF------PSIIEFSKLLSAIAKMNKFDVVISLGE 105
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
M+ G+ + +T+ ++ L+ V G++++ G+ P+
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN--------------- 150
Query: 204 NIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
+V+ +S+++GY + EA+ L +QM T + + + +++
Sbjct: 151 ----------------IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIH 194
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC--GQVIVARSFFDQMKTSS- 320
+ + +L ++ G +PDL+ C G +A + ++M+
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGC--QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL 252
Query: 321 ---VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQW 377
V+++N +I G K H ++A++LF+EM T+ I+P+ VT S G A
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASR 312
Query: 378 MDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAMIMGYG 433
+ + + + D+F +ALID + K G + A ++D R+ + ++ +S++I G+
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 434 LHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNE 493
+H + EA ++ M P+ VT+ L+ V EG E+F M G+
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 494 HYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSAC----KIHRHVTLGEYA 546
Y+ ++ L +AG D A + +M + P + + LL K+ + + + EY
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 547 AKKLFSLDPYNTGHYVQLSNLYASSRL---WDHVAHVRVLMREKGLSKDLGYSVIEINGK 603
+ ++P + + + + + ++ WD ++ + KG+ D V+ N
Sbjct: 493 QRS--KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL----KGVKPD----VVAYNTM 542
Query: 604 LQVFHVGDKSHPRSDEIYNEIQRLERRLKEIGFVPHT 640
+ F S +D ++ E +KE G +P++
Sbjct: 543 ISGF-CRKGSKEEADALFKE-------MKEDGTLPNS 571
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 185/448 (41%), Gaps = 44/448 (9%)
Query: 77 NQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRS 132
++++ G + + +VNG G A L ++ P V ++N II G +
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 133 NLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQ 192
+ + ++ M +G+ P+ T+ ++ + + + +I PDVF
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 193 NGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYAQNGEALEALRLFNQMRN 248
+ L+ + K G + A ++D + R++ V+++S+I+G+ + EA ++F M +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 249 TDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIV 308
D + ++++ + +E+G V
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGME-------------------------------V 418
Query: 309 ARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQ 368
R + + + +N +I G + G + A ++F+EM++ + P+ +T + +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 369 VGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK----DVIM 424
G L+ A + +Y+ +S+ I+ +I+ K G VE +F S K DV+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 425 WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMR 484
++ MI G+ G EA L+ M++ G PN + L+ A G EL MR
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 485 GFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
G V ++L G LD+++
Sbjct: 599 SCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 190/457 (41%), Gaps = 16/457 (3%)
Query: 78 QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF----SHPDVFLWNAIIRGYSRSN 133
+++ G + N ++ L+NG + I A L D+ P+ +N +I G N
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + M +G PD T+ V+ + D L+ + ++ + P V + N
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
++ K ++ A +F + + VV+++S+IS G +A RL + M
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
+ D +++ A+ L + L+ ++K + SL + ++ A
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 310 RSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ F+ M + V+ +N +I G+ K EE +++FREM R + ++VT
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKD 421
Q G +AQ + + +I L+D K G +E A +VF+ E
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
+ ++ MI G G+ + +L+ + GV P+ V + +++ G E LF
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
M+ G P + Y+ ++ R G + + + I +M
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 180/420 (42%), Gaps = 23/420 (5%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P + N+++ G+ N + + M G PD TF ++ + + +
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSIISGYAQ 232
+++ G PD+ ++ K G +A + + + + VV + +II G +
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 233 NGEALEALRLFNQMRNTDVKLD---WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
+A LFN+M +K D + L+S + YG D R L + K
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD--ASRLLSDMLEK---NIN 317
Query: 290 PDLLI--SLTAFYAKCGQVIVARSFFDQMKTSS-----VIMWNAMISGYAKNGHAEEAVD 342
PDL+ +L + K G+++ A +D+M S V+ +N +I G+ K EE ++
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 343 LFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYA 402
+FREM R + ++VT + Q AQ + + DI L+D
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437
Query: 403 KCGNVESARIVFD----RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
GNVE+A +VF+ R + D++ ++ MI G+ + +L+ ++ GV PN V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497
Query: 459 TFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
T+ +++ GL E LF M+ G P + Y+ ++ R G + + I +M
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/526 (21%), Positives = 221/526 (42%), Gaps = 57/526 (10%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P + ++ ++ ++ N F I + M+ G+ + +T+ + L+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQ 232
G++++ G+GP + N L+ + I A + D + + V++T+++ G Q
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
+ +A EA+ L +M + D + +++ + K G EPDL
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVING----------------LCKRG---EPDL 233
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
++L K G++ + V+++N +I G K H ++A DLF +M T+ I
Sbjct: 234 ALNLLNKMEK-GKI-----------EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 353 KPDSVTVRSAALASAQVGSLKLA-QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
KPD T G A + + D + K+ +F N ALID + K G + A
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFN-ALIDAFVKEGKLVEAE 340
Query: 412 IVFDRTSEK-----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
++D + DV+ ++ +I G+ + + E + ++ M Q G+ N VT+ L+
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 467 CNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFI----MKMS 519
+ +F M G+ P Y+ ++D L G ++ A ++++ MK+
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 520 IEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAH 579
I ++ AL A K+ L + + L + P N Y + + + L +
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDL--FCSLSLKGVKP-NVVTYTTMMSGFCRKGLKEEADA 517
Query: 580 VRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ 625
+ V M+E G + G I +L+ D S E+ E++
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLR-----DGDEAASAELIKEMR 558
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 112/278 (40%), Gaps = 48/278 (17%)
Query: 94 LVNGSSNLGHICYARKLFDEF-----SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRRE 148
L++ G + A KL+DE PDV +N +I+G+ + +E++ M +
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 149 GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA 208
G+ + T+ ++ + D + +V Q++ G PD+ N L+ GN+ A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 209 RVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRA 264
VVF+ + R +V++T++I + G+ + LF + VK + + +++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 265 YGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI-- 322
+ + G ++E D L F +MK +
Sbjct: 506 F----------------CRKGLKEEADAL-------------------FVEMKEDGPLPN 530
Query: 323 --MWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVT 358
+N +I ++G + +L +EM + D+ T
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 208/500 (41%), Gaps = 51/500 (10%)
Query: 16 PKVTSFEIPTCLFLKFIKHLCSSSVLNLGHVVSLD---HGLNLDS-FYASLIDNSTHKRH 71
P V++F + IK LC + L ++ D +GL D + +++ +
Sbjct: 187 PDVSTFNV-------LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 72 LD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH-----PDVFLWN 123
LD +I Q++ G + + +V+G G + A E S+ PD + +N
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 124 AIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRY 183
++ G ++ ++ IE+ +M +EG DPD +T+ V+ +L + + + V Q+I
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 184 GFGPDVFVQNGLVAMYAKCGNI----GMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
P+ N L++ K + +ARV+ V ++ S+I G A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 240 LRLFNQMRNTDVKLD---WIALVSIVRAYGDVDD---LEQGRSLHGCIIKMGFEDEPDLL 293
+ LF +MR+ + D + L+ + + G +D+ + + L GC + +
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN----- 474
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMIT 349
+L + K + A FD+M+ V + +N +I G K+ E+A L +MI
Sbjct: 475 -TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
KPD T S + G +K A + ++ + DI LI K G VE
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 410 ARIVFDRTSEKDVIM----WSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND-----VTF 460
A + K + + ++ +I G + EAINL+ M + P D + F
Sbjct: 594 ASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 461 IGLLTACNHSGLVREGWELF 480
GL CN G +RE +
Sbjct: 654 RGL---CNGGGPIREAVDFL 670
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 166/449 (36%), Gaps = 75/449 (16%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PDV +N +I+ R++ R I M M G+ PD TF V++ E D + +
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 177 HGQVIRYG------------------------------------FGPDVFVQNGLVAMYA 200
Q++ +G F PD + N LV
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 201 KCGNIGMARVVFDGL----NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWI 256
K G++ A + D + D V ++ S+ISG + GE EA+ + +QM D + +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 257 ALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQM 316
+++ + +E+ L + G PD
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGIL--PD------------------------- 399
Query: 317 KTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQ 376
V +N++I G + A++LF EM ++ +PD T + G L A
Sbjct: 400 ----VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 377 WMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS----EKDVIMWSAMIMGY 432
M + S A + LID + K A +FD ++ + ++ +I G
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 433 GLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
+ +A L M G P+ T+ LLT G +++ ++ M G EP
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 493 EHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
Y ++ L +AG ++ A + + ++
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 182/428 (42%), Gaps = 23/428 (5%)
Query: 125 IIRGYSRSNLFRNTIEMYGLMRRE-GVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRY 183
+I Y++ L + + M E G+ PD + +L + +L + H ++ +
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 184 GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSIISGYAQNGEALEA 239
G PDV N L+ + + A ++ + + +V ++T+++ GY + G+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 240 LRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE--PDLLI--S 295
LR+ QM +++ IV + +E + I +M +D PD +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF---IQEMSNQDGFFPDQYTFNT 300
Query: 296 LTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRN 351
L K G V A D M V +N++ISG K G +EAV++ +MITR+
Sbjct: 301 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
Query: 352 IKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR 411
P++VT + + ++ A + ++ D+ +LI N A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 412 IVFD----RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTAC 467
+F+ + E D ++ +I G+ EA+N+ M +G + +T+ L+
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 468 NHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE---PGV 524
+ RE E+F M G+ + Y+ ++D L ++ ++ A + +M +E P
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 525 SVWGALLS 532
+ +LL+
Sbjct: 541 YTYNSLLT 548
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 192/458 (41%), Gaps = 50/458 (10%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P + +N ++ ++ N F I + M+ G+ D +T+ + L+ V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEA 236
++++ G+ PD +V+ +S+++GY +
Sbjct: 141 LAKMMKLGYEPD-------------------------------IVTLSSLLNGYCHSKRI 169
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
+A+ L +QM K D +++ + + +L +++ G +PDL+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC--QPDLVTYG 227
Query: 297 TAFYAKC--GQVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLFREMITR 350
T C G + +A S +M+ + V+++N +I G K H ++A++LF EM +
Sbjct: 228 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Query: 351 NIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
I+PD T S G A + + + + ++ +ALID + K G + A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 411 RIVFD----RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTA 466
++D R+ + D+ +S++I G+ +H + EA +++ M PN VT+ L+
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 467 CNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPG 523
+ V EG ELF M G+ Y+ ++ +A D A + ++ + + P
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 524 VSVWGALLSAC----KIHRHVTLGEYAAKKLFSLDPYN 557
+ + LL K+ + + + EY + D Y
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 195/436 (44%), Gaps = 21/436 (4%)
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
PD+ ++++ GY S + + + M G PD FTF ++ +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSIISGYA 231
+ Q+++ G PD+ +V K G+I +A + + + VV + +II G
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 232 QNGEALEALRLFNQMRNTDVKLD---WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFED 288
+ +AL LF +M N ++ D + +L+S + YG D + L +I+
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR---LLSDMIERKINP 326
Query: 289 EPDLLISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLF 344
+L + K G+++ A +D+M S+ ++++I+G+ + +EA +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 345 REMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKC 404
MI+++ P+ VT + + ++ + +S+ + T LI + +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 405 GNVESARIVFDRTSE----KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTF 460
+ ++A++VF + +++ ++ ++ G +G+ +A+ ++ ++++ + P+ T+
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSI 520
++ +G V +GWELF + G+ P Y+ ++ R G ++A + KM
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 521 E---PGVSVWGALLSA 533
+ P + L+ A
Sbjct: 567 DGPLPNSGTYNTLIRA 582
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 147/355 (41%), Gaps = 31/355 (8%)
Query: 59 YASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y ++ID +H+D N ++ G++ + F + L++ N G A +L +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 116 ----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+P+V ++A+I + + ++Y M + +DPD FT+ ++ + R
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC--MHDR 378
Query: 172 LSCLVH--GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTS 225
L H +I P+V + L+ + K + +F ++ R V++T+
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 226 IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
+I G+ Q + A +F QM + V + + ++ D L + L ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL------DGLCKNGKLAKAMVVFE 492
Query: 286 FED----EPDLLIS--LTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNG 335
+ EPD+ + K G+V F + + +VI +N MISG+ + G
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
EEA L ++M P+S T + A + G + + + + +A D
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 104/507 (20%), Positives = 223/507 (43%), Gaps = 29/507 (5%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLM-RREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQV 180
++ +I+ Y RS + + ++ +M + + P+ T +L + F L+ + +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 181 IRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSIISGYAQNGEA 236
+ G PDV++ G++ + ++ A+ + + D +V + +I G + +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISL 296
EA+ + + D+K D + ++V V + E G + ++ + F + SL
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 297 TAFYAKCGQVIVA----RSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
K G++ A + D + ++ ++NA+I K EA LF M +
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 353 KPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESAR- 411
+P+ VT + G L A + + ++ +LI+ + K G++ +A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 412 ---IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACN 468
+ ++ E V+ +++++ GY G+ +A+ LYH M G+ P+ TF LL+
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 469 HSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVS 525
+GL+R+ +LF+ M + ++P Y+ +++ G + +A++F+ +M+ I P
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 526 VWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGH-------YVQLSNLYASSRLWDHVA 578
+ L IH G+ + K+F +D + G+ Y L + + +
Sbjct: 579 SYRPL-----IHGLCLTGQASEAKVF-VDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 579 HVRVLMREKGLSKDLGYSVIEINGKLQ 605
V M ++G+ DL + I+G L+
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/469 (21%), Positives = 183/469 (39%), Gaps = 92/469 (19%)
Query: 91 ITKLVNGSSNLGHICYA----RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
++ LV G G I A +++ D P++F++NA+I + F ++ M
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 147 REGVDPDGFTFPYVLKA-CTE-LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGN 204
+ G+ P+ T+ ++ C LD LS L G+++ G V+ N L+ + K G+
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFL--GEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 205 IG-----MARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
I MA ++ L + TVV++TS++ GY G+ +ALRL+++M +
Sbjct: 453 ISAAEGFMAEMINKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
++ L+ + + G + A F++M
Sbjct: 512 TL----------------------------------LSGLF-RAGLIRDAVKLFNEMAEW 536
Query: 320 SV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
+V + +N MI GY + G +A + +EM + I PD+ + R G A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA------------------------- 410
+ D + K + T L+ + + G +E A
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 411 ------RIVF--------DRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPN 456
R +F DR + D +++++MI G EA ++ M G PN
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 457 DVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRA 505
+VT+ ++ +G V E L M+ P Y C +D+L +
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 135/664 (20%), Positives = 237/664 (35%), Gaps = 147/664 (22%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMR 146
++ L++G H A +LF++ PDV+++ +IR EM M
Sbjct: 195 LSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 147 REGVDPDGFTF-----------------------------PYVLKACT------------ 165
G D + + P V+ CT
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 166 -------ELLDFR-------LSCLVHG---------------QVIRYGFGPDVFVQNGLV 196
E+L R +S LV G +V+ +G P++FV N L+
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 197 AMYAKCGNIGMARVVFDGL-------NDRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
K A ++FD + ND V+++ +I + + G+ AL +M +T
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPND---VTYSILIDMFCRRGKLDTALSFLGEMVDT 431
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVA 309
+KL S++ + D+ +I E SL Y G++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 310 RSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
+ +M S+ + ++SG + G +AV LF EM N+KP+ VT
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKD 421
+ G + A +++ D + LI G A++ D E +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAG-----VC---------------------- 454
I ++ ++ G+ G+ EA+++ M Q G VC
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 455 --------PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAG 506
P+DV + ++ A + +G +E + ++ M G P Y+ V++ L +AG
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 507 YLDQAYDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSN 566
++++A KM +P SV + C + +T GE +K L H L
Sbjct: 732 FVNEAEVLCSKM--QPVSSVPNQVTYGCFLD-ILTKGEVDMQKAVEL------HNAILKG 782
Query: 567 LYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
L A++ ++ + +R R+ IE +L +GD P I
Sbjct: 783 LLANTATYNML--IRGFCRQ---------GRIEEASELITRMIGDGVSPDCITYTTMINE 831
Query: 627 LERR 630
L RR
Sbjct: 832 LCRR 835
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 97/494 (19%), Positives = 196/494 (39%), Gaps = 43/494 (8%)
Query: 56 DSFYASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD 112
D Y+ LID + LD +++ +GLK + + L+NG G I A
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 113 EFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELL 168
E + P V + +++ GY + +Y M +G+ P +TF +L
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG 521
Query: 169 DFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWT 224
R + + ++ + P+ N ++ Y + G++ A + ++ +V S+
Sbjct: 522 LIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 225 SIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKM 284
+I G G+A EA + + + +L+ I ++ + LE+ S+ +++
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 285 GFEDEPDLLISLTAFYAKCGQVIVARS--------FFDQMK-------TSSVIMWNAMIS 329
G + DL+ C V++ S FF +K +++ +MI
Sbjct: 642 GVD--LDLV---------CYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 330 GYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYAS 389
+K G +EA ++ MI P+ VT + + G + A+ + +
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 390 DIFVNTALIDMYAKCGNVESARIV-----FDRTSEKDVIMWSAMIMGYGLHGQGWEAINL 444
+ +D+ K G V+ + V + + ++ +I G+ G+ EA L
Sbjct: 751 NQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 445 YHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGR 504
M GV P+ +T+ ++ V++ EL++ M GI P Y+ ++
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 505 AGYLDQAYDFIMKM 518
AG + +A + +M
Sbjct: 870 AGEMGKATELRNEM 883
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 185/440 (42%), Gaps = 48/440 (10%)
Query: 92 TKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRR 147
T L+ G LG A K+ + PDV +N +I GY ++ N + ++ R
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS---VLDR 197
Query: 148 EGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGM 207
V PD T+ +L++ + + + V ++++ PDV L+ + +G
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 208 ARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVR 263
A + D + DR VV++ +++G + G EA++ N M ++ + + I I+R
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 264 AYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIM 323
+ L +++ GF + SV+
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGF-------------------------------SPSVVT 346
Query: 324 WNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA-QWMDDYV 382
+N +I+ + G A+D+ +M +P+S++ + + A ++++ V
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 383 SKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKD----VIMWSAMIMGYGLHGQG 438
S+ Y + NT L + K G VE A + ++ S K +I ++ +I G G+
Sbjct: 407 SRGCYPDIVTYNTMLTAL-CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 439 WEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCV 498
+AI L MR + P+ +T+ L+ + G V E + FH GI P ++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 499 VDLLGRAGYLDQAYDFIMKM 518
+ L ++ D+A DF++ M
Sbjct: 526 MLGLCKSRQTDRAIDFLVFM 545
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 172/376 (45%), Gaps = 16/376 (4%)
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYA 231
V G+V++ G+ PD N L+ G + A V+ D + + VV++ SI++G
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
++G+ AL L +M +VK D +I+ + ++ SL + G +
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 292 LLISLTAFYAKCGQ----VIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREM 347
SL K G+ ++ + + +VI +N ++ + K G +EA +L++EM
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNV 407
ITR I P+ +T + L A M D + +++ + DI T+LI Y V
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 408 ESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
+ VF S++ + + +S ++ G+ G+ A L+ M GV P+ +T+ L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---I 520
L +G + + E+F ++ ++ Y+ +++ + + G ++ A++ + +
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 521 EPGVSVWGALLSA-CK 535
+P V + ++S CK
Sbjct: 505 KPNVMTYTVMISGLCK 520
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/459 (20%), Positives = 192/459 (41%), Gaps = 20/459 (4%)
Query: 78 QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSN 133
QL ++G+ HN + + ++N C+A + + PD +N +I+G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + M G PD T+ ++ D L+ + ++ DVF +
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 194 GLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
++ + G I A +F + + +VV++ S++ G + G+ + L M +
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 250 DVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQ--VI 307
++ + I ++ + L++ L+ +I G P+++ T C Q +
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS--PNIITYNTLMDGYCMQNRLS 350
Query: 308 VARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
A + D M + ++ + ++I GY ++ + +FR + R + ++VT
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD--RTSEKD 421
Q G +KLA+ + + D+ L+D G +E A +F+ + S+ D
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 422 --VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
++M++ +I G G+ +A NL+ ++ GV PN +T+ +++ G + E L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM 518
M G P + Y+ ++ R G L + I +M
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 143/372 (38%), Gaps = 45/372 (12%)
Query: 59 YASLIDNSTHKRHLD---QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARK------ 109
Y+++ID+ +D + ++ G+K + LV G +C A K
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG------LCKAGKWNDGAL 284
Query: 110 -LFDEFSH---PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDP---------DGFT 156
L D S P+V +N ++ + + + E+Y M G+ P DG+
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 157 FPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN 216
L +LD ++R PD+ L+ Y + VF ++
Sbjct: 345 MQNRLSEANNMLDL---------MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 217 DR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLE 272
R V+++ ++ G+ Q+G+ A LF +M + V D + ++ D LE
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 273 QGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMI 328
+ + + K + + ++ K G+V A + F + +V+ + MI
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 329 SGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYA 388
SG K G EA L R+M P+ T + A + G L + + + + ++
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 389 SDIFVNTALIDM 400
+D +IDM
Sbjct: 576 ADASSIKMVIDM 587
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 165/357 (46%), Gaps = 16/357 (4%)
Query: 193 NGLVAMYAKCGNIGMARVVFD----GLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRN 248
+ +++ + G + +A+ +F+ G TV +++++IS Y ++G EA+ +FN M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 249 TDVKLDWIALVSIVRAYGDVD-DLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
++ + + +++ A G + +Q + + G + + SL A ++ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 308 VARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
AR+ FD+M V +N ++ K G + A ++ +M + I P+ V+ +
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS----E 419
A+ G A + + A D L+ +Y K G E A + + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
KDV+ ++A++ GYG G+ E ++ M++ V PN +T+ L+ + GL +E E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLSA 533
F + G+ YS ++D L + G + A I +M+ I P V + +++ A
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 204/490 (41%), Gaps = 77/490 (15%)
Query: 86 HNGFLITKLVNGSSNLGHICYARKLFDE-FSH---PDVFLWNAIIRGYSRSNLFRNTIEM 141
G L + +++ G + A+++F+ F+ V+ ++A+I Y RS L I +
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 142 YGLMRREGVDPDGFTFPYVLKACTE-LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYA 200
+ M+ G+ P+ T+ V+ AC + ++F+ ++ R G PD N L+A+ +
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS 350
Query: 201 KCGNIGMARVVFDGLNDR---------------------------------------TVV 221
+ G AR +FD + +R VV
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVV 410
Query: 222 SWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCI 281
S++++I G+A+ G EAL LF +MR + LD ++ +++ Y V E+ + +
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 282 IKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHA 337
+G + + +L Y K G+ + F +MK V + ++ +I GY+K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 338 EEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTAL 397
+EA+++FRE + ++ D V + A + G + A + D ++K + ++ ++
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 398 IDMYAKCGNVE---------------SARIVFDRTSEKDVIMWSAMIMGYGLH------G 436
ID + + ++ SA T VI + +
Sbjct: 591 IDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE 650
Query: 437 QGWEAIN----LYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRN 492
+G + ++ ++ M Q + PN VTF +L AC+ + L +R F N
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD----N 706
Query: 493 EHYSCVVDLL 502
+ Y V LL
Sbjct: 707 KVYGVVHGLL 716
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 158/360 (43%), Gaps = 13/360 (3%)
Query: 184 GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND----RTVVSWTSIISGYAQNG-EALE 238
G+G V+ + L++ Y + G A VF+ + + +V++ ++I + G E +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 239 ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTA 298
+ F++M+ V+ D I S++ E R+L + E + +L
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 299 FYAKCGQVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKP 354
K GQ+ +A QM +V+ ++ +I G+AK G +EA++LF EM I
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 355 DSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVF 414
D V+ + +VG + A + ++ D+ AL+ Y K G + + VF
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 415 DRTSEKDVI----MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHS 470
+ V+ +S +I GY G EA+ ++ + AG+ + V + L+ A +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 471 GLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEPGVSVWGAL 530
GLV L M GI P Y+ ++D GR+ +D++ D+ S+ S AL
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 171/396 (43%), Gaps = 31/396 (7%)
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
PD+ + ++I G+ N + M M G+ PD + ++ + + +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRT----VVSWTSIISGYA 231
+ Q+ YG PDV + LV G A + G+ R V+++ ++I +
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY---GDVDDLEQGRSL---HGCIIKMG 285
+ G+ L+A L+N+M + + S++ + G VD+ Q L GC
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF---- 314
Query: 286 FEDEPDLL--ISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEE 339
PD++ SL + KC +V A F +M T + I + +I G+ + G
Sbjct: 315 ----PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEY---ASDIFVNTA 396
A ++F M++R + P+ T G +K A + + + K E A +I+
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNV 430
Query: 397 LIDMYAKCGNVESARIVFD--RTSEKDVIMWSAMIMGYGL--HGQGWEAINLYHAMRQAG 452
L+ G +E A +VF+ R E D+ + + I+ G+ G+ A+NL+ ++ G
Sbjct: 431 LLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Query: 453 VCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
V PN VT+ +++ GL E LF M+ G+
Sbjct: 491 VKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 148/322 (45%), Gaps = 18/322 (5%)
Query: 226 IISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG 285
+++ + Q+ + A +M + D + S++ + + +E+ S+ +++MG
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 286 FEDEPDLLISLTAFYAKC--GQVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEE 339
+ PD+++ T + C G V A S FDQM+ V+M+ ++++G +G +
Sbjct: 173 IK--PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 340 AVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALID 399
A L R M R IKPD +T + A + G A+ + + + + A +IF T+LI+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 400 MYAKCGNVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCP 455
+ G V+ AR +F K DV+ ++++I G+ + +A+ +++ M Q G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 456 NDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFI 515
N +T+ L+ G E+F M G+ P Y+ ++ L G + +A
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 516 MKMS------IEPGVSVWGALL 531
M + P + + LL
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLL 432
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 186/423 (43%), Gaps = 16/423 (3%)
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
D++ N ++ + +S+ G M + G +PD TF ++ + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND----RTVVSWTSIISGYAQN 233
Q++ G PDV + ++ K G++ A +FD + + VV +TS+++G +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
G +A L M +K D I +++ A+ L+ +I+M
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
SL + G V AR F M+T V+ + ++I+G+ K ++A+ +F EM
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
+ + +++T + QVG +AQ + ++ +I L+ G V+
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 410 ARIVFDRTSEKDVI-----MWSAMIMGYGL--HGQGWEAINLYHAMRQAGVCPNDVTFIG 462
A ++F+ ++++ +W+ ++ +GL +G+ +A+ ++ MR+ + +T+
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 463 LLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIEP 522
++ +G V+ LF + G++P Y+ ++ L R G +A+ KM E
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK-ED 524
Query: 523 GVS 525
GVS
Sbjct: 525 GVS 527
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 125/557 (22%), Positives = 219/557 (39%), Gaps = 106/557 (19%)
Query: 107 ARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
AR LF E PD ++A+I + R+ +R + + M R + P T+ ++
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV-- 220
AC ++R + V ++ G GPD+ N +++ Y A F+ + V
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 221 --VSWTSIISGYAQNGEALEALRLFNQMRN--TDVKLDWIALVSIVRAYGDVDDLEQGRS 276
++ II ++ G++ +AL LFN MR + + D + SI+ Y ++E R+
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 341
Query: 277 LHGCIIKMGFEDE---------------------------------PDLL--ISLTAFYA 301
+ ++ G + PD++ L Y
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 302 KCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
+ Q A+ F M+ +V+ +NA+I Y NG EAV++FR+M IKP+ V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA----LIDMYAKCGNVESARIV 413
+V LA+ K+ D V + + I +NTA I Y +E A +
Sbjct: 462 SV-CTLLAACSRSKKKVNV---DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 517
Query: 414 FDRTSEKDVI---------------------------------------MWSAMIMGYGL 434
+ +K V ++S+++ Y
Sbjct: 518 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 577
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
GQ EA ++++ M+ AG P+ + + +L A N S + ELF M GIEP +
Sbjct: 578 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 637
Query: 495 YSCVVDLLGRAGYLDQAY---DFIMKMSIEPGVSVWGALLSACKIHRHVTLGEY--AAKK 549
S ++ + G + D + + I +V+ + SAC TL E+ A
Sbjct: 638 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN-----TLQEWKRAIDL 692
Query: 550 LFSLDPYNTGHYVQLSN 566
+ +DPY + L+N
Sbjct: 693 IQMMDPYLPSLSIGLTN 709
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 172/420 (40%), Gaps = 20/420 (4%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PDV + ++ Y RS E++ +MR+E P+ T+ ++ A + +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYAQ 232
Q+ + G P+V L+A ++ V R + ++ S I Y
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
E +A+ L+ MR VK D + ++ + + S + + ++
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSS----VIMWNAMISGYAKNGHAEEAVDLFREMI 348
S+ Y+K GQV A S F+QMK + VI + +M+ Y + +A +LF EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
I+PDS+ + A + G + D + + E F ++++ C ++
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP---FTGAVFFEIFSACNTLQ 684
Query: 409 SARIVFDRTSEKDVIMWS-------AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
+ D D + S M+ +G G+ + L++ + +GV N T+
Sbjct: 685 EWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYA 744
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
LL G R+ E+ M G GI+P N+ Y ++ R+ ++ ++ +++ +E
Sbjct: 745 ILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE--FEPLIRQKLE 802
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 169/390 (43%), Gaps = 54/390 (13%)
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
V + D ++ N ++S Y +A+ F M ++PD+ T +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 368 QVGSLKLAQWMDDYVS----KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS----E 419
++G + +Q +D + S ++E D+ T+++ +Y+ G +E+ R VF+ +
Sbjct: 295 KLG--QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+++ ++A++ Y +HG A+++ ++Q G+ P+ V++ LL + S + E+
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLSAC-- 534
F MR +P Y+ ++D G G+L +A + +M I+P V LL+AC
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 535 ---KIHRHVTLGEYAAKKL-FSLDPYNT--GHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
K++ L ++ + + YN+ G Y+ + L + L+ MR+K
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS-------MRKKK 525
Query: 589 LSKDLGYSVIEINGKLQVF----------HVGDKSHPRSDEIYN-------------EIQ 625
+ D I I+G ++ + D S P + E+Y+ E +
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 626 RLERRLKEIGFVPHT---ESVLHDLNYEEK 652
+ ++K G P S+LH N EK
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEK 615
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/484 (19%), Positives = 206/484 (42%), Gaps = 24/484 (4%)
Query: 83 GLKHNGFLITKLVNGSSNLGHICYA----RKLFDEFSHPDVFLWNAIIRGYSRSNLFRNT 138
G+ HN + + L+N + A K+ PD+ N+++ G+ N +
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 139 IEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM 198
+ + G M G PD FTF ++ + + +++ G PD+ +V
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 199 YAKCGNIGMA----RVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLD 254
K G+I +A + + G + VV + +II +AL LF +M N ++ +
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 255 WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFD 314
+ S++R + L +I+ +L + K G+++ A +D
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 315 QMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVG 370
+M S+ ++++I+G+ + +EA +F MI+++ P+ VT + +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 371 SLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE----KDVIMWS 426
+ + +S+ + T LI + + ++A+IVF + D++ +S
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 427 AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGF 486
++ G +G+ A+ ++ ++++ + P+ T+ ++ +G V +GW+LF +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 487 GIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE---PGVSVWGALLSACKIHRHVTLG 543
G++P Y+ ++ R G ++A +M E P + L+ A H+ G
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA-----HLRDG 585
Query: 544 EYAA 547
+ AA
Sbjct: 586 DKAA 589
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/563 (21%), Positives = 235/563 (41%), Gaps = 56/563 (9%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P + ++ ++ ++ N F I + M+ G+ + +T+ ++ L+ V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA-----RVVFDGLNDRTVVSWTSIISGYA 231
++++ G+ PD+ N L+ + I A ++V G + ++ ++I G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF-TFNTLIHGLF 197
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY---GDVD-------DLEQGRSLHGCI 281
++ A EA+ L ++M + D + +V GD+D +EQG+
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI----- 252
Query: 282 IKMGFEDEPDLLISLTAFYAKCG--QVIVARSFFDQMKTS----SVIMWNAMISGYAKNG 335
EP ++I T A C V A + F +M +V+ +N++I G
Sbjct: 253 -------EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 336 HAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNT 395
+A L +MI R I P+ VT + A + G L A+ + D + K DIF +
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 396 ALIDMYAKCGNVESARIVFDRTSEKD----VIMWSAMIMGYGLHGQGWEAINLYHAMRQA 451
+LI+ + ++ A+ +F+ KD V+ ++ +I G+ + E + L+ M Q
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 452 GVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA 511
G+ N VT+ L+ + +F M G+ P YS ++D L G ++ A
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 512 ---YDFIMKMSIEPGVSVWGALLSA-CKIHRHVTLG--EYAAKKLFSLDPYNTGHYVQLS 565
++++ + +EP + + ++ CK + V G + + L + P N Y +
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK-VEDGWDLFCSLSLKGVKP-NVVTYTTMM 543
Query: 566 NLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ 625
+ + L + + M+E+G D G I H+ D S E+ E++
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA-----HLRDGDKAASAELIREMR 598
Query: 626 --RLERRLKEIGFVPHTESVLHD 646
R IG V + +LHD
Sbjct: 599 SCRFVGDASTIGLVTN---MLHD 618
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/316 (17%), Positives = 132/316 (41%), Gaps = 50/316 (15%)
Query: 59 YASLIDNSTHKRHL---DQIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD--- 112
+++LID + L +++++++I + + F + L+NG + A+ +F+
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 113 -EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+ P+V +N +I+G+ ++ +E++ M + G+ + T+ ++ + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSII 227
+ +V Q++ G PD+ + L+ G + A VVF+ L + + ++ +I
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
G + G+ + LF + VK + + +++ + + G +
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF----------------CRKGLK 552
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI----MWNAMISGYAKNGHAEEAVDL 343
+E D L F +MK + +N +I + ++G + +L
Sbjct: 553 EEADAL-------------------FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAEL 593
Query: 344 FREMITRNIKPDSVTV 359
REM + D+ T+
Sbjct: 594 IREMRSCRFVGDASTI 609
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 125/557 (22%), Positives = 219/557 (39%), Gaps = 106/557 (19%)
Query: 107 ARKLFDEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK 162
AR LF E PD ++A+I + R+ +R + + M R + P T+ ++
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 163 ACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV-- 220
AC ++R + V ++ G GPD+ N +++ Y A F+ + V
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 221 --VSWTSIISGYAQNGEALEALRLFNQMRN--TDVKLDWIALVSIVRAYGDVDDLEQGRS 276
++ II ++ G++ +AL LFN MR + + D + SI+ Y ++E R+
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 277 LHGCIIKMGFEDE---------------------------------PDLL--ISLTAFYA 301
+ ++ G + PD++ L Y
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 302 KCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSV 357
+ Q A+ F M+ +V+ +NA+I Y NG EAV++FR+M IKP+ V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 358 TVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTA----LIDMYAKCGNVESARIV 413
+V LA+ K+ D V + + I +NTA I Y +E A +
Sbjct: 330 SV-CTLLAACSRSKKKVNV---DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIAL 385
Query: 414 FDRTSEKDVI---------------------------------------MWSAMIMGYGL 434
+ +K V ++S+++ Y
Sbjct: 386 YQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK 445
Query: 435 HGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEH 494
GQ EA ++++ M+ AG P+ + + +L A N S + ELF M GIEP +
Sbjct: 446 QGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIA 505
Query: 495 YSCVVDLLGRAGYLDQAY---DFIMKMSIEPGVSVWGALLSACKIHRHVTLGEY--AAKK 549
S ++ + G + D + + I +V+ + SAC TL E+ A
Sbjct: 506 CSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN-----TLQEWKRAIDL 560
Query: 550 LFSLDPYNTGHYVQLSN 566
+ +DPY + L+N
Sbjct: 561 IQMMDPYLPSLSIGLTN 577
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 179/440 (40%), Gaps = 27/440 (6%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PDV + ++ Y RS E++ +MR+E P+ T+ ++ A + +
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYAQ 232
Q+ + G P+V L+A ++ V R + ++ S I Y
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
E +A+ L+ MR VK D + ++ + + S + + ++
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 435
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSS----VIMWNAMISGYAKNGHAEEAVDLFREMI 348
S+ Y+K GQV A S F+QMK + VI + +M+ Y + +A +LF EM
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
I+PDS+ + A + G + D + + E F ++++ C ++
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIP---FTGAVFFEIFSACNTLQ 552
Query: 409 SARIVFDRTSEKDVIMWS-------AMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
+ D D + S M+ +G G+ + L++ + +GV N T+
Sbjct: 553 EWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYA 612
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
LL G R+ E+ M G GI+P N+ Y ++ R+ ++ ++ +++ +
Sbjct: 613 ILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE--FEPLIRQKL- 669
Query: 522 PGVSVWGALLSACKIHRHVT 541
G + CKI+ VT
Sbjct: 670 ------GEMREECKINDSVT 683
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 169/390 (43%), Gaps = 54/390 (13%)
Query: 308 VARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASA 367
V + D ++ N ++S Y +A+ F M ++PD+ T +
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 162
Query: 368 QVGSLKLAQWMDDYVS----KSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS----E 419
++G + +Q +D + S ++E D+ T+++ +Y+ G +E+ R VF+ +
Sbjct: 163 KLG--QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 220
Query: 420 KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWEL 479
+++ ++A++ Y +HG A+++ ++Q G+ P+ V++ LL + S + E+
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 480 FHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLSAC-- 534
F MR +P Y+ ++D G G+L +A + +M I+P V LL+AC
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 535 ---KIHRHVTLGEYAAKKL-FSLDPYNT--GHYVQLSNLYASSRLWDHVAHVRVLMREKG 588
K++ L ++ + + YN+ G Y+ + L + L+ MR+K
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQS-------MRKKK 393
Query: 589 LSKDLGYSVIEINGKLQVF----------HVGDKSHPRSDEIYN-------------EIQ 625
+ D I I+G ++ + D S P + E+Y+ E +
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 626 RLERRLKEIGFVPHT---ESVLHDLNYEEK 652
+ ++K G P S+LH N EK
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEK 483
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 147/339 (43%), Gaps = 11/339 (3%)
Query: 36 CSSS-VLNLGHVVSLDHGLNLDSFYASLIDNSTHKRHLDQIHNQLIVSGLKHNGFLITKL 94
CS+S +L L +SL ++ S A +R ++ ++ S ++ I +L
Sbjct: 70 CSTSDILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRL 129
Query: 95 VNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDG 154
+ + G + R++FD H D W + G + + ++ M +
Sbjct: 130 LLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHS-QKGA 188
Query: 155 FTFPY-----VLKACTELLDFRLSCLVHGQVIRYGF--GPDVFVQNGLVAMYAKCGNIGM 207
F P VLKAC + DF L VH + GF D ++ L+ Y + +
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 208 ARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGD 267
A +V L++ V+W + ++ + GE E +R F +M N +K + ++++A
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 268 VDDL-EQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK-TSSVIMWN 325
V D G+ +H IK+GFE + + L Y K G+V A F K +SV WN
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 326 AMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAAL 364
AM++ Y +NG EA+ L +M IK + A L
Sbjct: 369 AMVASYMQNGIYIEAIKLLYQMKATGIKAHDTLLNEAHL 407
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 12/289 (4%)
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEA 239
+++ P + N L+ M+ CG + + R +FD + R SW + G + G+ +A
Sbjct: 114 IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDA 173
Query: 240 LRLFNQMRNTDVK-----LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI 294
LF M K WI L +++A + D E G+ +H K+GF DE D +
Sbjct: 174 AFLFVSMLKHSQKGAFKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYL 232
Query: 295 --SLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
SL FY + + A Q+ ++ + W A ++ + G +E + F EM I
Sbjct: 233 SGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGI 292
Query: 353 KPDSVTVRSAALASAQVGSL--KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESA 410
K + V+V S L + S + Q + K + SD + LI+MY K G V+ A
Sbjct: 293 KKN-VSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDA 351
Query: 411 RIVFDRTS-EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDV 458
VF + E V W+AM+ Y +G EAI L + M+ G+ +D
Sbjct: 352 EKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDT 400
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 206/483 (42%), Gaps = 55/483 (11%)
Query: 55 LDSFYASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLF 111
L S + +LID L+ N +++ SG+ + +++ GH+ A L
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 112 DEFSH----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKA-CTE 166
+ PD +N ++ ++ + +E Y +R+ G+ PD T VL C
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 167 LLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTS- 225
+ + ++ ++ R D ++ MY G + A+ +F+ V+S T+
Sbjct: 424 KMVAEVEAVI-AEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL 482
Query: 226 --IISGYAQNG--------------------EALE----------------ALRLFNQMR 247
+I YA+ G + LE AL LF M+
Sbjct: 483 AAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMK 542
Query: 248 NTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI 307
N D S+ + VD +++ + + ++ G + ++ A Y + G +
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 308 VARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAA 363
A ++ M+ + V +++ ++I+G+A++G EEA+ FR M ++ + + + S
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 364 LASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEK--- 420
A ++VG L+ A+ + D + SE D+ + +++ + A G V A +F+ EK
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 421 DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELF 480
DVI ++ M+ Y G EAI + MR++G+ + +F ++ G + E ELF
Sbjct: 723 DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELF 782
Query: 481 HCM 483
H M
Sbjct: 783 HEM 785
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 187/454 (41%), Gaps = 57/454 (12%)
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLK--ACTELLDFRLSCL 175
DV +N +I+ Y ++ L + ++ M+ +G PD T+ + + A +L+D L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYA 231
+++ G P ++A Y + G + A +++ + V V + S+I+G+A
Sbjct: 574 --AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMG-FEDEP 290
++G EA++ F M V+ + I L S+++AY V LE+ R ++ KM E P
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYD---KMKDSEGGP 688
Query: 291 DLLIS--LTAFYAKCGQVIVARSFFDQMKT------------------------------ 318
D+ S + + A G V A S F+ ++
Sbjct: 689 DVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAE 748
Query: 319 --------SSVIMWNAMISGYAKNGHAEEAVDLFREM-ITRNIKPDSVTVRS--AALASA 367
S +N +++ YA +G E +LF EM + R + D T ++ L
Sbjct: 749 EMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKG 808
Query: 368 QVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSA 427
V S ++Q Y A+ T M +ES + + ++ ++A
Sbjct: 809 GVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNA 868
Query: 428 MIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFG 487
+I Y G A+ Y M++ G+ P+ VT L+ +G+V EG + H FG
Sbjct: 869 VIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMV-EGVKRVHSRLTFG 927
Query: 488 -IEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSI 520
+EP + V D A D A +MSI
Sbjct: 928 ELEPSQSLFKAVRDAYVSANRQDLADVVKKEMSI 961
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/492 (21%), Positives = 194/492 (39%), Gaps = 62/492 (12%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVI 181
+N +I Y ++ + ++ M + GV D TF ++ C + + ++
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 182 RYGFGPDVFVQNGLVAMYAKCGNIGMA-----RVVFDGLNDRTVVSWTSIISGYAQNGEA 236
G PD N L++++A G+I A ++ GL TV + +++ Q
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTV-THRAVLHILCQRKMV 426
Query: 237 LEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH-----GCIIKMGFEDEPD 291
E + +M +++D ++ I++ Y + + Q ++L C++
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS------ST 480
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSS-----VIMWNAMISGYAKNGHAEEAVDLFRE 346
L ++ YA+ G + A + F + S V+ +N MI Y K E+A+ LF+
Sbjct: 481 TLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKG 540
Query: 347 MITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGN 406
M + PD T S +F A +D+
Sbjct: 541 MKNQGTWPDECTYNS-----------------------------LFQMLAGVDLVD---- 567
Query: 407 VESARIV---FDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGL 463
E+ RI+ D + ++AMI Y G +A++LY AM + GV PN+V + L
Sbjct: 568 -EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 464 LTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSI 520
+ SG+V E + F M G++ + + ++ + G L++A YD +
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG 686
Query: 521 EPGVSVWGALLSACKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVAHV 580
P V+ ++LS C V+ E L + + + LY + D V
Sbjct: 687 GPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEV 746
Query: 581 RVLMREKGLSKD 592
MRE GL D
Sbjct: 747 AEEMRESGLLSD 758
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/496 (19%), Positives = 224/496 (45%), Gaps = 38/496 (7%)
Query: 78 QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSN 133
++ + G+ HN + ++N + +A + + P + N+++ G+ N
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 134 LFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQN 193
+ + M G PD TF ++ + + + +++ G PD+
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 194 GLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSIISGYAQNGEALEALRLFNQMRNT 249
++ K G +A + + + + VV ++++I + +AL LF +M N
Sbjct: 210 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 250 DVKLD---WIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCG 304
++ D + +L+S + YG D R L + + + P+++ SL +AK G
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSD--ASRLLSDMLER---KINPNVVTFNSLIDAFAKEG 324
Query: 305 QVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVR 360
++I A FD+M S+ + +N++I+G+ + +EA +F M++++ PD VT
Sbjct: 325 KLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 361 SAALASAQVGSLKLAQWMDDY--VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTS 418
+ L + + K+ M+ + +S+ + T LI + + + ++A++VF +
Sbjct: 385 T--LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 419 E----KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVR 474
+++ ++ ++ G +G+ +A+ ++ ++++ + P+ T+ + +G V
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Query: 475 EGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE---PGVSVWGALL 531
+GW+LF + G++P Y+ ++ + G ++AY +KM + P + L+
Sbjct: 503 DGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Query: 532 SACKIHRHVTLGEYAA 547
A H+ G+ AA
Sbjct: 563 RA-----HLRDGDKAA 573
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/489 (20%), Positives = 199/489 (40%), Gaps = 52/489 (10%)
Query: 84 LKHNGFLITKLVNGSSNLGHICYARKLFDEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYG 143
L N L KL G + +R P + ++ ++ ++ F I
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPF------PSIVEFSKLLSAIAKMKKFDLVISFGE 89
Query: 144 LMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCG 203
M GV + +T+ ++ + + G++++ G+GP + N L+ +
Sbjct: 90 KMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 149
Query: 204 NIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALV 259
I A + D + + V++T+++ G Q+ +A EA+ L +M + D +
Sbjct: 150 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 209
Query: 260 SIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS 319
+++ + K G EPDL ++L K G++ +
Sbjct: 210 AVING----------------LCKRG---EPDLALNLLNKMEK-GKI-----------EA 238
Query: 320 SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMD 379
V++++ +I K H ++A++LF EM + I+PD T S G A +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 380 DYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAMIMGYGLH 435
+ + + ++ +LID +AK G + A +FD R+ + +++ ++++I G+ +H
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 436 GQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHY 495
+ EA ++ M P+ VT+ L+ + V +G ELF M G+ Y
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 496 SCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSAC----KIHRHVTLGEYAAK 548
+ ++ +A D A +M + P + + LL K+ + + + EY K
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 549 KLFSLDPYN 557
D Y
Sbjct: 479 SKMEPDIYT 487
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 148/359 (41%), Gaps = 19/359 (5%)
Query: 59 YASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEF- 114
Y+++ID+ RH+D N ++ G++ + F + L++ N G A +L +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 115 ---SHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
+P+V +N++I +++ +++ M + +DP+ T+ ++
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSII 227
+ + ++ PDV N L+ + K + +F ++ R V++T++I
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
G+ Q + A +F QM + V + + +++ LE+ + + K E
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 288 DEPDLLIS--LTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAV 341
PD+ ++ K G+V F + VI +N MISG+ K G EEA
Sbjct: 483 --PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 342 DLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDM 400
LF +M PDS T + A + G + + + +A D + DM
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/550 (20%), Positives = 231/550 (42%), Gaps = 30/550 (5%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P +F +N ++ ++ F I + M+R G+ + +T+ ++ L+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQ 232
G++++ G+ P + + L+ Y I A + D + + +++T++I G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
+ +A EA+ L ++M + + + +V D++ +L + E + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMI 348
++ K V A + F +M+T +V+ ++++IS G +A L +MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ I P+ VT + A + G A+ + D + K DIF +LI+ + ++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 409 SARIVFDRTSEKDVI----MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
A+ +F+ KD ++ +I G+ + + L+ M G+ + VT+ L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 465 TACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIE 521
H G ++F M G+ P YS ++D L G L++A +D++ K I+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 522 PGVSVWGALLSA-CKIHRHVTLG--EYAAKKLFSLDPYNTGHYVQLSNLYASSRLWDHVA 578
+ ++ ++ CK + V G + + L + P + +S L S RL
Sbjct: 428 LDIYIYTTMIEGMCKAGK-VDDGWDLFCSLSLKGVKPNVVTYNTMISGL-CSKRLLQEAY 485
Query: 579 HVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQ--RLERRLKEIGF 636
+ M+E G D G I H+ D S E+ E++ R IG
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRA-----HLRDGDKAASAELIREMRSCRFVGDASTIGL 540
Query: 637 VPHTESVLHD 646
V + +LHD
Sbjct: 541 VAN---MLHD 547
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 97/489 (19%), Positives = 206/489 (42%), Gaps = 34/489 (6%)
Query: 83 GLKHNGFLITKLVNGSSNLGHICYARKLFDEFS----HPDVFLWNAIIRGYSRSNLFRNT 138
G+ HN + L+N I A L + P + ++++ GY +
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 139 IEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAM 198
+ + M G PD TF ++ + + ++++ G P++ +V
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 199 YAKCGNIGMARVVFDGLN----DRTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVK-- 252
K G+I +A + + + + VV + +II + +AL LF +M ++
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 253 -LDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLI--SLTAFYAKCGQVIVA 309
+ + +L+S + +YG D Q L I K + P+L+ +L + K G+ + A
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQ--LLSDMIEK---KINPNLVTFNALIDAFVKEGKFVEA 274
Query: 310 RSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALA 365
D M S+ +N++I+G+ + ++A +F M++++ PD T +
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 366 SAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE----KD 421
+ ++ + +S D T LI G+ ++A+ VF + D
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394
Query: 422 VIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFH 481
++ +S ++ G +G+ +A+ ++ M+++ + + + ++ +G V +GW+LF
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454
Query: 482 CMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE---PGVSVWGALLSACKIHR 538
+ G++P Y+ ++ L L +AY + KM + P + L+ A
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA----- 509
Query: 539 HVTLGEYAA 547
H+ G+ AA
Sbjct: 510 HLRDGDKAA 518
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 165/387 (42%), Gaps = 27/387 (6%)
Query: 140 EMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMY 199
EM G +G PD T+ VL L+ L+ ++ R G DV+ +V +
Sbjct: 473 EMIG----QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 200 AKCGNIGMARVVFDGLND----RTVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW 255
K G I AR F+ + + VV++T++I Y + + A LF M + +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 256 IALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQ 315
+ +++ + +E+ + + G +D PD+ + + + D
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMC--GSKDVPDVDMYF-------------KQYDDN 633
Query: 316 MKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLA 375
+ +V+ + A++ G+ K+ EEA L M +P+ + + +VG L A
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 376 QWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSE----KDVIMWSAMIMG 431
Q + +S+ + + ++ ++LID Y K + A V + E +V++++ MI G
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
G+ EA L M + G PN VT+ ++ G + EL M G+ P
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKM 518
Y ++D + G LD A++ + +M
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/569 (21%), Positives = 212/569 (37%), Gaps = 39/569 (6%)
Query: 57 SFYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD- 112
S Y LI LD IH ++ ++ L+ +GF + +G A L +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 113 EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRL 172
E PD + +I G ++LF ++ MR P+ T+ +L C
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 173 SCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGL----NDRTVVSWTSIIS 228
V ++ G P + N LV Y G+ A + + + V + +I
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 229 GYAQNGEALE------ALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCII 282
+ ++L A + +++M V L+ I + S R E+ S+ +I
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 283 KMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAE 338
GF + + + ++ +A F++MK + V + M+ + K G E
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 339 EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
+A F EM P+ VT + A + + A + + + +I +ALI
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 399 DMYAKCGNVESARIVFDR-TSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPND 457
D + K G VE A +F+R KDV Y + + PN
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER----------------PNV 639
Query: 458 VTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMK 517
VT+ LL S V E +L M G EP Y ++D L + G LD+A + +
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 518 MS---IEPGVSVWGALLSA-CKIHRHVTLGEYAAKKLFSLDPYNTGHYVQLSNLYASSRL 573
MS + + +L+ K+ R + +K L + N Y ++ +
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 574 WDHVAHVRVLMREKGLSKDLGYSVIEING 602
D + +M EKG ++ I+G
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/543 (18%), Positives = 214/543 (39%), Gaps = 63/543 (11%)
Query: 75 IHNQLIVSGLKHNGFLITKLVNGSSNLGHI----CYARKLFDEFSHPDVFLWNAIIRGYS 130
++ ++ SG+ N + + +VN G + + ++ ++ +PD+ +N +I YS
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 131 RSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVF 190
L E+ M +G P +T+ V+ + + + V +++R G PD
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD-- 339
Query: 191 VQNGLVAMYAKCGNIGMARVVFDGLNDRTVVSWTSIISGYAQNGEALEALRLFNQMRNTD 250
++ S++ + G+ +E ++F+ MR+ D
Sbjct: 340 -----------------------------STTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 251 VKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVAR 310
V D + S++ + +L++ + + G + + L Y + G + VA
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 311 SFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALAS 366
+ ++M V+ +N ++ G K EA LF EM R + PDS T+
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 367 AQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDV---- 422
++G+L+ A + + + D+ L+D + K G++++A+ ++ K++
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 423 IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHC 482
I +S ++ G EA ++ M + P + ++ SG +G
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 483 MRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE-----PGVSVWGALLSACKIH 537
M G P Y+ ++ R + +A+ + KM E P V + ++L
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 538 RHVTLGEYAAKKLFS--LDPYNTGH------YVQLSNLYASSRLWDHVAHVRVLMREKGL 589
+ E +K+ ++P + + +V NL + R+ D M ++G
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE-------MLQRGF 723
Query: 590 SKD 592
S D
Sbjct: 724 SPD 726
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 190/454 (41%), Gaps = 29/454 (6%)
Query: 121 LWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLD-------FRLS 173
+++ +IR Y ++ R E + L+R +G F + AC L+ L+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKG-------FTVSIDACNALIGSLVRIGWVELA 219
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISG 229
V+ ++ R G G +V+ N +V K G + + ++ V V++ ++IS
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
Y+ G EA L N M +++ E+ + + +++ G +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFR 345
SL K G V+ F M++ V + +++M+S + ++G+ ++A+ F
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
+ + PD+V + G + +A + + + + A D+ ++ K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 406 NVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
+ A +F+ +E+ D + +I G+ G A+ L+ M++ + + VT+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY---DFIMKM 518
LL G + E++ M I P YS +V+ L G+L +A+ D ++
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 519 SIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS 552
+I+P V + +++ + + GE +K+ S
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 141/319 (44%), Gaps = 21/319 (6%)
Query: 59 YASLIDNSTHKRHLDQI---HNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
++S++ T +LD+ N + +GL + + T L+ G G I A L +E
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 116 HP----DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
DV +N I+ G + + +++ M + PD +T ++ +L + +
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSII 227
+ + ++ DV N L+ + K G+I A+ ++ + + T +S++ ++
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
+ G EA R++++M + ++K + S+++ Y + G S +I GF
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 288 DEPDLLISLTAFYAKCGQVIVARSF--FDQMK------TSSVIMWNAMISGYAKNGHAEE 339
PD + T Y + ++++F +M+ V +N+++ G+ + +E
Sbjct: 618 --PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 340 AVDLFREMITRNIKPDSVT 358
A + R+MI R + PD T
Sbjct: 676 AEVVLRKMIERGVNPDRST 694
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/509 (22%), Positives = 197/509 (38%), Gaps = 66/509 (12%)
Query: 59 YASLIDNSTHKRHLDQIH---NQLIVSGLKHNGFLITKLVNGSSNLGHICYA----RKLF 111
Y+SL+ +R +D + ++ GLK N + T + G I A +++
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 112 DEFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
DE PDV + +I + E++ M+ PD T+ +L ++ D
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSII 227
++ + G PDV LV K GN G A D + D+ ++ ++ ++I
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI 405
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
G + +AL LF M + VK + + YG
Sbjct: 406 CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG--------------------- 444
Query: 288 DEPDLLISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDL 343
K G + A F++MKT +++ NA + AK G EA +
Sbjct: 445 --------------KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 344 FREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAK 403
F + + PDSVT ++VG + A + + ++ D+ V +LI+ K
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 404 CGNVESARIVFDRTSE----KDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVT 459
V+ A +F R E V+ ++ ++ G G +G+ EAI L+ M Q G PN +T
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 460 FIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY------- 512
F L + V ++ M G P Y+ ++ L + G + +A
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Query: 513 -----DFIMKMSIEPGVSVWGALLSACKI 536
DF+ ++ PGV + A KI
Sbjct: 671 KLVYPDFVTLCTLLPGVVKASLIEDAYKI 699
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 196/479 (40%), Gaps = 97/479 (20%)
Query: 59 YASLIDNSTHKRHLDQIH---NQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y +L+D + R LD + +++ G + T LV+ G+ A D
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFR 171
P++ +N +I G R + + +E++G M GV P +T+ + + D
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 172 LSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSII 227
+ ++ G P++ N + AK G A+ +F GL D + V++ ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 228 SGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFE 287
Y++ GE EA++L ++M +GC
Sbjct: 511 KCYSKVGEIDEAIKLLSEMME-----------------------------NGC------- 534
Query: 288 DEPDLLI--SLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKNGHAEEAV 341
EPD+++ SL K +V A F +MK +V+ +N +++G KNG +EA+
Sbjct: 535 -EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 342 DLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMY 401
+LF M+ + P+++T + + D + K++ V AL ++
Sbjct: 594 ELFEGMVQKGCPPNTITFNT----------------LFDCLCKNDE-----VTLALKMLF 632
Query: 402 AKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
+ D DV ++ +I G +GQ EA+ +H M++ V P+ VT
Sbjct: 633 K----------MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLC 681
Query: 462 GLLTACNHSGLVREGWE-----LFHCMRGFGIEPRNEHYSCVV-DLLGRAGYLDQAYDF 514
LL + L+ + ++ L++C +P N + ++ +L AG +D A F
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCAD----QPANLFWEDLIGSILAEAG-IDNAVSF 735
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 216/515 (41%), Gaps = 46/515 (8%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
P++ NA + +++ R +++ ++ G+ PD T+ ++K +++ + + +
Sbjct: 466 PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLND----RTVVSWTSIISGYAQ 232
+++ G PDV V N L+ K + A +F + + TVV++ ++++G +
Sbjct: 526 LSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGK 585
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
NG+ EA+ LF M + I ++ D++ + ++ MG PD+
Sbjct: 586 NGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC--VPDV 643
Query: 293 LISLTAFYA--KCGQVIVARSFFDQMKT---SSVIMWNAMISGYAKNGHAEEAVDLFREM 347
T + K GQV A FF QMK + ++ G K E+A
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK----- 698
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSE--YASDIF-----VNTALIDM 400
I N + + +GS+ +D+ VS SE A+ I + +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 401 YAKCGNVESARIVFDRTSEKDVIMWSA-----MIMGYGLHGQGWE-AINLYHAMRQAGVC 454
K NV AR +F++ + KD+ + +++G L E A +++ ++ G
Sbjct: 759 SCKHNNVSGARTLFEKFT-KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 455 PNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA--- 511
P+ T+ LL A SG + E +EL+ M E ++ V+ L +AG +D A
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 512 -YDFIMKMSIEPGVSVWGALLSACKIHRHVTLGEYAAKKLFS--LD----PYNTGHYVQL 564
YD + P +G L+ + Y AK+LF LD P N Y L
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRL----YEAKQLFEGMLDYGCRP-NCAIYNIL 932
Query: 565 SNLYASSRLWDHVAHVRVLMREKGLSKDLG-YSVI 598
N + + D + M ++G+ DL YSV+
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL 967
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/580 (19%), Positives = 231/580 (39%), Gaps = 70/580 (12%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGY 129
++ ++++ +G + + ++ L+N + A K+F P V +N ++ G
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
++ + IE++ M ++G P+ TF + + + L+ + +++ G PDV
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 190 FVQNGLVAMYAKCGNIGMARVVFDGLNDRT---VVSWTSIISGYAQNGEALEALRLFNQM 246
F N ++ K G + A F + V+ +++ G + +A ++
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 247 ----RNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGF-EDEPDLLISLTAFYA 301
+ L W L+ + A +D+ S ++ G D +L+ + +
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDN---AVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 302 KCGQVIVARSFFDQMKT-----SSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
K V AR+ F++ + +N +I G + E A D+F ++ + PD
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDR 416
T L+D Y K G ++ ++
Sbjct: 821 ATY-----------------------------------NFLLDAYGKSGKIDELFELYKE 845
Query: 417 TS----EKDVIMWSAMIMGYGLHGQGWEAINLYH-AMRQAGVCPNDVTFIGLLTACNHSG 471
S E + I + +I G G +A++LY+ M P T+ L+ + SG
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 472 LVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKMSIEPGVSVWG 528
+ E +LF M +G P Y+ +++ G+AG D A + ++K + P + +
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 529 ALLSACKIHRHVTLGEYAAKKL--FSLDPYNTGHYVQLSNLYASSRLWDHVAHVRVLMRE 586
L+ + V G + K+L L+P + + ++ L S RL + + +
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 587 KGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEIYNEIQR 626
+G++ DL Y+ + L + + +++ +IYNEIQR
Sbjct: 1026 RGITPDL-YTYNSLILNLGIAGMVEEAG----KIYNEIQR 1060
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 182/434 (41%), Gaps = 60/434 (13%)
Query: 50 DHGLNLDSFYASLIDNSTHKRHLDQ---IHNQLIVSGLKHNG-FLITKLVNGSSNLGHIC 105
D NL F+ LI + + +D +L+ +G+ +G ++ ++ S ++
Sbjct: 709 DQPANL--FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 106 YARKLFDEFS-----HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYV 160
AR LF++F+ P + +N +I G +++ +++ ++ G PD T+ ++
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 161 LKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMA-RVVFDGLNDR- 218
L A + ++ ++ + + N +++ K GN+ A + +D ++DR
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 219 ---TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGR 275
T ++ +I G +++G EA +LF M + + + ++ +G + +
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 276 SLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGY 331
+L ++K G + L G+V +F ++K S V+ +N +I+G
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 332 AKNGHAEEAVDLFREMIT-RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASD 390
K+ EEA+ LF EM T R I PD T S L +L +A
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL------NLGIA--------------- 1045
Query: 391 IFVNTALIDMYAKCGNVESARIVFDRTS----EKDVIMWSAMIMGYGLHGQGWEAINLYH 446
G VE A +++ E +V ++A+I GY L G+ A +Y
Sbjct: 1046 --------------GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 447 AMRQAGVCPNDVTF 460
M G PN T+
Sbjct: 1092 TMVTGGFSPNTGTY 1105
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/455 (18%), Positives = 168/455 (36%), Gaps = 78/455 (17%)
Query: 91 ITKLVNGSSNLGHICYARKLFDEFSHP-DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREG 149
I K ++ L YA + EF + + +N +I +S +E+Y M EG
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 150 VDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMAR 209
P T+ ++ + D + ++ G P+V+ + + + G I A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 210 VVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAY 265
+ ++D VV++T +I + A +F +M+ K D + ++++ +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 266 GDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSV 321
D DL+ + F+ +M+ V
Sbjct: 339 SDNRDLDS-----------------------------------VKQFWSEMEKDGHVPDV 363
Query: 322 IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY 381
+ + ++ K G+ EA D M + I P+ T + +V +DD
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV------HRLDD- 416
Query: 382 VSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWEA 441
A ++F GN+ES + + + I YG G A
Sbjct: 417 ------ALELF------------GNMESLGV------KPTAYTYIVFIDYYGKSGDSVSA 452
Query: 442 INLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDL 501
+ + M+ G+ PN V L + +G RE ++F+ ++ G+ P + Y+ ++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 502 LGRAGYLDQAYDFIMKM---SIEPGVSVWGALLSA 533
+ G +D+A + +M EP V V +L++
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 140/352 (39%), Gaps = 67/352 (19%)
Query: 184 GFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEA 239
G P + N L+ + I +A+ VF + V ++ ++ Y ++G+ E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 240 LRLFNQMRNTDVKLDWIA---LVSIVRAYGDVDD-------LEQGRSLHGCIIKMGFEDE 289
L+ +M + + + I ++S + G+VDD L R G
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG---- 895
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKT----SSVIMWNAMISGYAKNGHAEEAVDLFR 345
L +K G++ A+ F+ M + ++N +I+G+ K G A+ A LF+
Sbjct: 896 -----PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
M+ ++PD T + L+D G
Sbjct: 951 RMVKEGVRPDLKTY-----------------------------------SVLVDCLCMVG 975
Query: 406 NVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQA-GVCPNDVTF 460
V+ F E DV+ ++ +I G G + EA+ L++ M+ + G+ P+ T+
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 461 IGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAY 512
L+ +G+V E ++++ ++ G+EP ++ ++ +G + AY
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAY 1087
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 174/390 (44%), Gaps = 12/390 (3%)
Query: 118 DVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVH 177
D++ + +I + R + + + G M + G P T +L + F+ + +
Sbjct: 113 DLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 178 GQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV----VSWTSIISGYAQN 233
+ +GF P+V + N ++ K ++ A VF + + + V++ ++ISG + +
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 234 GEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLL 293
G +A RL M + + I +++ + +L + R+L+ +I+
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 294 ISLTAFYAKCGQVIVARSFFDQMKTS----SVIMWNAMISGYAKNGHAEEAVDLFREMIT 349
SL + G + A+ FD M + V+ +N +I+G+ K+ E+ + LF EM
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 350 RNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVES 409
+ + D+ T + Q G L +AQ + + + + DI L+D G +E
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 410 ARIVFD--RTSEKDV--IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLT 465
A ++ + + SE DV I ++ +I G + EA L+ ++ + GV P+ + +I +++
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 466 ACNHSGLVREGWELFHCMRGFGIEPRNEHY 495
GL RE +L M+ G P Y
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 194/438 (44%), Gaps = 36/438 (8%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
++V +T +++ A+ + + L+++M N + D + ++ + L +L
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKN 334
G ++K+GF L SL + + + A S D M +V+++N +I+G KN
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS-LKLAQWMDDYVSKSEYASDIFV 393
A+++F M + I+ D+VT + + G A+ + D V + + IF
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 394 NTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMR 449
TALID + K GN+ AR ++ R+ +V ++++I G+ +HG +A ++ M
Sbjct: 258 -TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 450 QAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLD 509
G P+ VT+ L+T S V +G +LF M G+ Y+ ++ +AG L+
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 510 QAYDFIMKM---SIEPGVSVWGALLSAC----KIHRHVTLGEYAAKKLFSLD--PYNTGH 560
A +M + P + + LL KI + + + E K +D YN
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN--- 433
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEINGKLQVFHVGDKSHPRSDEI 620
+ + L + +L + R L R KG+ D + I+G + +
Sbjct: 434 -IIIQGLCRTDKLKEAWCLFRSLTR-KGVKPDAIAYITMISGLCR------------KGL 479
Query: 621 YNEIQRLERRLKEIGFVP 638
E +L RR+KE GF+P
Sbjct: 480 QREADKLCRRMKEDGFMP 497
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 58 FYASLIDNSTHKRHLDQIHN---QLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFD-- 112
F+ +LID + +L + N ++I + N F L+NG G + A+ +FD
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 113 --EFSHPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDF 170
+ PDV +N +I G+ +S + ++++ M +G+ D FT+ ++ +
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 171 RLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSI 226
++ V +++ G PD+ N L+ G I A V+ + L D ++++ I
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 435
Query: 227 ISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIV 262
I G + + EA LF + VK D IA ++++
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 162/368 (44%), Gaps = 16/368 (4%)
Query: 143 GLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKC 202
G M + G +PD TF +L + + Q++ GF P+V L+ K
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 203 GNIGMARVVFDGLNDR----TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIAL 258
++ A +F+ + VV++ ++++G + G +A L M ++ + I
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 259 VSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKC--GQVIVARSFFDQM 316
+++ A+ V L + + L+ +I+M PD+ + C G + AR F M
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVY--PDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 317 KTSSV----IMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSL 372
+ + +++ +I G+ K+ E+ + +F EM + + +++T VG
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 373 KLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFD----RTSEKDVIMWSAM 428
+AQ + + +S DI L+D G VE A ++F+ R + +++ ++ +
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 429 IMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGI 488
I G G+ +A +L+ ++ G+ PN +T+ +++ GL+ E LF M+ G
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 489 EPRNEHYS 496
P Y
Sbjct: 500 LPNESVYK 507
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 149/346 (43%), Gaps = 15/346 (4%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLH 278
+++ +T ++S A+ + LF QM+ + ++ +
Sbjct: 82 SIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFL 141
Query: 279 GCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMK----TSSVIMWNAMISGYAKN 334
G ++K+GFE + SL Y ++ A + FDQ+ +V+ + +I KN
Sbjct: 142 GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN 201
Query: 335 GHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVN 394
H AV+LF +M T +P+ VT + ++G A W+ + K ++
Sbjct: 202 RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITF 261
Query: 395 TALIDMYAKCGNVESAR----IVFDRTSEKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQ 450
TALID + K G + A+ ++ + DV + ++I G ++G EA +++ M +
Sbjct: 262 TALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
Query: 451 AGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD---LLGRAGY 507
G PN+V + L+ S V +G ++F+ M G+ Y+ ++ L+GR
Sbjct: 322 NGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDV 381
Query: 508 LDQAYDFIMKMSIEPGVSVWGALLSAC----KIHRHVTLGEYAAKK 549
+ ++ + P + + LL K+ + + + EY K+
Sbjct: 382 AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 203/489 (41%), Gaps = 35/489 (7%)
Query: 70 RHLDQIHNQLIVSGLKHNGFLI---------TKLVNGSSNLGHICYARKLFDEFSH---- 116
RH QI N + L GF L NG NL A LF H
Sbjct: 22 RHRLQISNPRTAASLSLCGFCFWIRAFSSYRKILRNGLHNL-QFNDALDLFTRMVHSRPL 80
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKA-CTELLDFRLSCL 175
P + + ++ ++ N + I ++ M+ G+ P T V+ C R SC
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCF 140
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFD---GLNDR-TVVSWTSIISGYA 231
+ G++++ GF PD+ L+ Y I A +FD G+ + VV++T++I
Sbjct: 141 L-GKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+N A+ LFNQM + + + ++V ++ L ++K E
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 292 LLISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREM 347
+L + K G+++ A+ ++ M SV + ++I+G G +EA +F M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 348 ITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDY--VSKSEYASDIFVNTALIDMYAKCG 405
P+ V L S ++ M + +S+ ++ T LI Y G
Sbjct: 320 ERNGCYPNEVIY--TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 406 NVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
+ A+ VF++ S + D+ ++ ++ G +G+ +A+ ++ MR+ + N VT+
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYT 437
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMSIE 521
++ G V + ++LF + G++P Y+ ++ R G + +A KM +
Sbjct: 438 IIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Query: 522 ---PGVSVW 527
P SV+
Sbjct: 498 GFLPNESVY 506
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 185/432 (42%), Gaps = 23/432 (5%)
Query: 122 WNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTE--LLDFRLSCLVHGQ 179
+NA+I +R+N + + MR++G D + V+++ T +D + ++ +
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 180 VIRYGFGPDVFVQNGLVAMYAKCGN-------IGMARVVFDGLNDRTVVSWTSIISGYAQ 232
+ R DV + N ++ +AK G+ +GMA+ GL+ +T + SIIS A
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQAT--GLSAKTA-TLVSIISALAD 316
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
+G LEA LF ++R + +K A ++++ Y L+ S+ + K G +
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSV----IMWNAMISGYAKNGHAEEAVDLFREMI 348
L Y G+ AR +M+ V +++ +++G+ G ++ + +EM
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 349 TRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVE 408
+ +KPD + L A D + D LID + K G
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 409 SARIVFDRTSEKDVI----MWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLL 464
A +F+ + + ++ MI YG + + L M+ G+ PN VT L+
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 465 TACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKMS---IE 521
SG + E M+ G++P + Y+ +++ + G +QA + M+ ++
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 522 PGVSVWGALLSA 533
P + +L++A
Sbjct: 617 PSLLALNSLINA 628
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 160/394 (40%), Gaps = 67/394 (17%)
Query: 219 TVVSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDW---------------IALVSIVR 263
T +++ ++I A+N + +AL L +MR + D+ I V ++R
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 264 AYGDV--DDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCGQVI-VARSFFDQMKTSS 320
Y ++ D LE L II MGF D +K Q++ +A++ KT++
Sbjct: 256 LYKEIERDKLELDVQLVNDII-MGFAKSGD--------PSKALQLLGMAQATGLSAKTAT 306
Query: 321 VIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDD 380
++ ++IS A +G EA LF E+ IKP + + + G LK A+ M
Sbjct: 307 LV---SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 381 YVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMGYGLHGQGWE 440
+ K + D + LID Y G ESARIV
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE------------------------ 399
Query: 441 AINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVD 500
M V PN F LL G ++ +++ M+ G++P + Y+ V+D
Sbjct: 400 -------MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 501 LLGRAGYLDQA---YDFIMKMSIEPGVSVWGALLSA-CKIHRHVTLGE-YAAKKLFSLDP 555
G+ LD A +D ++ IEP W L+ CK RH+ E + A + P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 556 YNTGHYVQLSNLYASSRLWDHVAHVRVLMREKGL 589
T + + + N Y WD + + M+ +G+
Sbjct: 513 CATTYNIMI-NSYGDQERWDDMKRLLGKMKSQGI 545
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 151/382 (39%), Gaps = 47/382 (12%)
Query: 81 VSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGYSRSNLFR 136
+GL + +++ ++ G A LF+E P +NA+++GY ++ +
Sbjct: 297 ATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLK 356
Query: 137 NTIEMYGLMRREGVDPDGFTFPYVLKAC--------------------TELLDFRLSCLV 176
+ M M + GV PD T+ ++ A + F S L+
Sbjct: 357 DAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416
Query: 177 HG-----------QVIR----YGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTV- 220
G QV++ G PD N ++ + K + A FD + +
Sbjct: 417 AGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIE 476
Query: 221 ---VSWTSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSL 277
V+W ++I + ++G + A +F M ++ +YGD + + + L
Sbjct: 477 PDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRL 536
Query: 278 HGCIIKMGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKT----SSVIMWNAMISGYAK 333
G + G +L Y K G+ A ++MK+ S M+NA+I+ YA+
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQ 596
Query: 334 NGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFV 393
G +E+AV+ FR M + +KP + + S A + A + Y+ ++ D+
Sbjct: 597 RGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVT 656
Query: 394 NTALIDMYAKCGNVESARIVFD 415
T L+ + + +V++
Sbjct: 657 YTTLMKALIRVDKFQKVPVVYE 678
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 32/225 (14%)
Query: 312 FFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDSVTVRSAALASAQVGS 371
Q +T + + +NA+I A+N E+A++L +M + D V S + S
Sbjct: 188 LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNY------SLVIQS 241
Query: 372 LKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCGNVESARIVFDRTSEKDVIMWSAMIMG 431
L + +D + L+ +Y + +E ++ E DV + + +IMG
Sbjct: 242 LTRSNKID--------------SVMLLRLYKE---IERDKL------ELDVQLVNDIIMG 278
Query: 432 YGLHGQGWEAINLYHAMRQAGVCPNDVTFIGLLTACNHSGLVREGWELFHCMRGFGIEPR 491
+ G +A+ L + G+ T + +++A SG E LF +R GI+PR
Sbjct: 279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 492 NEHYSCVVDLLGRAGYLDQAYDFIMKMS---IEPGVSVWGALLSA 533
Y+ ++ + G L A + +M + P + L+ A
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 182/449 (40%), Gaps = 54/449 (12%)
Query: 61 SLIDNSTHKRHLDQI---HNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS-- 115
S+++ +R D + + +I GL + + L G KL DE +
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 116 --HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLS 173
P+V+++ I R N +M+ LM++ GV P+ +T+ ++ + + R +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 174 CLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSWTSIISG 229
++ +++ P+V V LV + K + AR +F + D + + +I G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 230 YAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDE 289
+ ++G LEA+ L ++M + ++ D ++ CI ED
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL--------------CI-----ED- 388
Query: 290 PDLLISLTAFYAKCGQVIVARSFFDQMKTSSVI----MWNAMISGYAKNGHAEEAVDLFR 345
QV A F +MK + +N++I GY K + E+A+DL
Sbjct: 389 ---------------QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
EM ++P+ +T + V +K A + ++ D+ TALID + K
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Query: 406 NVESARIVFDRTSEKDV----IMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
N++ A ++ E + ++ ++ G+ G+ AI+ Y Q C N V F
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFT 553
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEP 490
L+ +G + F MR GI P
Sbjct: 554 CLIEGLCQNGYILRASRFFSDMRSCGITP 582
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 172/413 (41%), Gaps = 53/413 (12%)
Query: 117 PDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLV 176
PD +I+ G R F + Y LM G+ PD + + + C + + +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 177 HGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDRTVV----SWTSIISGYAQ 232
++ G P+V++ + + + A +F+ + V+ +++++I GY +
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 233 NGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDL 292
G +A L+ ++ ++ + + ++V + +L RSL ++K G + P+L
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD--PNL 339
Query: 293 LISLTAFYAKCGQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNI 352
+ +N +I G+ K+G+ EAV L EM + N+
Sbjct: 340 YV-----------------------------YNCLIHGHCKSGNMLEAVGLLSEMESLNL 370
Query: 353 KPD----SVTVRSAALASAQVGSLKLAQWMDD---YVSKSEYASDIFVNTALIDMYAKCG 405
PD ++ + + + +L Q M + + S + Y S LI Y K
Sbjct: 371 SPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNS-------LIHGYCKEY 423
Query: 406 NVESARIVFDRTS----EKDVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
N+E A + + E ++I +S +I GY A+ LY M G+ P+ VT+
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDF 514
L+ A ++E L+ M GI P + ++C+VD + G L A DF
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 159/384 (41%), Gaps = 25/384 (6%)
Query: 59 YASLIDNSTHKRHLDQ---IHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFS 115
Y+++ID ++ Q ++ +++V+ L N + LV+G + AR LF
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 116 H----PDVFLWNAIIRGYSRSNLFRNTIEMYGL---MRREGVDPDGFTFPYVLKA-CTEL 167
P+++++N +I G+ +S N +E GL M + PD FT+ ++ C E
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSG---NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 168 LDFRLSCLVHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLN----DRTVVSW 223
+ L F P N L+ Y K N+ A + + + ++++
Sbjct: 389 QVAEANRLFQKMKNERIF-PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITF 447
Query: 224 TSIISGYAQNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIK 283
+++I GY + A+ L+ +M + D + +++ A+ ++++ L+ +++
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Query: 284 MGFEDEPDLLISLTAFYAKCGQVIVARSFFDQMKTSSVIMWN-----AMISGYAKNGHAE 338
G L + K G++ VA F+ Q WN +I G +NG+
Sbjct: 508 AGIHPNDHTFACLVDGFWKEGRLSVAIDFY-QENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 339 EAVDLFREMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALI 398
A F +M + I PD + S Q + + + K+ ++ VN L
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Query: 399 DMYAKCGNVESARIVFDRTSEKDV 422
Y G V+SA + + + K V
Sbjct: 627 RFYQANGYVKSACFLTNSSRLKTV 650
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 124/580 (21%), Positives = 232/580 (40%), Gaps = 71/580 (12%)
Query: 74 QIHNQLIVSGLKHNGFLITKLVNGSSNLGHICYARKLFDEFSH----PDVFLWNAIIRGY 129
++ +++ SG+ KL+ G + KL D+ P++F +N I+G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 130 SRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCLVHGQVIRYGFGPDV 189
+ + M G + +G PD T+ ++ + F+ + + G+++ G PD
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 190 FVQNGLVAMYAKCGNIGMA-RVVFDGLNDRTV---VSWTSIISGYAQNGEALEALRLFNQ 245
+ N L+A Y K G + +A R+V D + + V ++ S+I G GE AL LFN+
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 246 MRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPDLLISLTAFYAKCG- 304
+K + I ++++ + + + L + + G E L K G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 305 --------QVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFREMITRNIKPDS 356
+V++++ +F + +N +I GY+ E A+++ M+ + PD
Sbjct: 442 VSDADGLVKVMISKGYF-----PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDV 496
Query: 357 VTVRSAALASAQVGSLKLAQWMDDYVSKSEY--ASDIFVNTALIDMYAKCGNVESARIVF 414
T S L + + K M+ Y + E A ++F L++ + ++ A +
Sbjct: 497 YTYNS--LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 415 DRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQA-GVCPNDVTFIGLLTACNH 469
+ K D + + +I G+ +G A L+ M +A V + T+ ++ A
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614
Query: 470 SGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQAYDFIMKM---SIEPGVSV 526
V +LF M + P Y +VD + G ++ Y F+++M P ++
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 527 WGALL-----------SACKIHRHVTLG---------------EYAAKKLFSLDPYNTGH 560
G ++ +A IHR V G E AA KL D
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKK-- 732
Query: 561 YVQLSNLYASSRLWDHVAHVRVLMREKGLSKDLGYSVIEI 600
YA L+D +R+K L K G++V+ I
Sbjct: 733 --SCITYYAYELLFDG-------LRDKRLRKKKGFTVVAI 763
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 168/441 (38%), Gaps = 55/441 (12%)
Query: 116 HPDVFLWNAIIRGYSRSNLFRNTIEMYGLMRREGVDPDGFTFPYVLKACTELLDFRLSCL 175
P VF +NAI+ S F ++Y MR G+ PD ++F +K+
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS------------ 155
Query: 176 VHGQVIRYGFGPDVFVQNGLVAMYAKCGNIGMARVVFDGLNDR----TVVSWTSIISGYA 231
+ K A + + ++ + VV++ +++ G+
Sbjct: 156 -----------------------FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 232 QNGEALEALRLFNQMRNTDVKLDWIALVSIVRAYGDVDDLEQGRSLHGCIIKMGFEDEPD 291
+ E LF +M + V L ++R D+++ L +IK G P+
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV--LPN 250
Query: 292 LLISLTAFYAKC------GQVIVARSFFDQMKTSSVIMWNAMISGYAKNGHAEEAVDLFR 345
L C G V + +Q VI +N +I G KN +EA
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 346 EMITRNIKPDSVTVRSAALASAQVGSLKLAQWMDDYVSKSEYASDIFVNTALIDMYAKCG 405
+M+ ++PDS T + + G ++LA+ + + + D F +LID G
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEG 370
Query: 406 NVESARIVFDRTSEK----DVIMWSAMIMGYGLHGQGWEAINLYHAMRQAGVCPNDVTFI 461
A +F+ K +VI+++ +I G G EA L + M + G+ P TF
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 462 GLLTACNHSGLVREGWELFHCMRGFGIEPRNEHYSCVVDLLGRAGYLDQA---YDFIMKM 518
L+ G V + L M G P ++ ++ ++ A D ++
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 519 SIEPGVSVWGALLSA-CKIHR 538
++P V + +LL+ CK +
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSK 511