Miyakogusa Predicted Gene
- Lj1g3v3206750.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3206750.1 tr|G7KKP9|G7KKP9_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_6g0,29.55,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,CUFF.30204.1
(287 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 221 3e-58
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 3e-57
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 4e-56
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 3e-55
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 4e-55
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 1e-54
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 4e-53
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 202 2e-52
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 1e-51
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 9e-51
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 1e-49
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 192 2e-49
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 7e-49
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 7e-49
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 2e-48
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 2e-48
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 189 2e-48
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 3e-48
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 1e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 3e-47
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 4e-47
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 8e-47
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 6e-46
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 1e-45
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 2e-45
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 3e-45
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 3e-45
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 7e-45
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 1e-44
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 6e-44
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 7e-44
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 2e-43
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 3e-43
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 3e-43
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 4e-43
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 5e-43
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 3e-42
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 1e-41
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 2e-41
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 166 2e-41
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 3e-41
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 6e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 2e-40
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 2e-40
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 4e-39
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 6e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 8e-39
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 8e-39
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 8e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 1e-38
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 2e-38
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 3e-38
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 154 7e-38
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 153 1e-37
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 1e-37
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 1e-37
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 2e-37
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 152 3e-37
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 4e-37
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 6e-37
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 7e-37
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 9e-37
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 2e-36
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 4e-36
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 7e-36
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 9e-36
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 1e-35
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 146 2e-35
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 2e-35
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 3e-35
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 7e-34
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 8e-34
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 4e-33
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 4e-33
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 8e-33
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 2e-32
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 4e-32
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 8e-32
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 133 1e-31
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 3e-31
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 131 5e-31
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 130 9e-31
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 9e-31
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 1e-30
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 3e-30
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 4e-30
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 1e-29
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 125 3e-29
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 4e-29
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 6e-29
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 6e-29
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 124 7e-29
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 1e-28
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 9e-28
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 120 2e-27
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 2e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 119 3e-27
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 118 4e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 5e-27
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 5e-27
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 6e-27
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 6e-27
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 7e-27
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 8e-27
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 2e-26
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 8e-26
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 1e-25
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 1e-25
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 113 2e-25
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 5e-25
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 1e-24
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 5e-23
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 6e-23
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 7e-23
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 3e-22
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 101 7e-22
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 101 7e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 100 1e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 99 4e-21
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 8e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 9e-21
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 97 1e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 96 2e-20
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 95 6e-20
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 95 7e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 8e-20
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 3e-19
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 3e-19
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 91 6e-19
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 7e-19
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 3e-18
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 89 4e-18
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 5e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 5e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 9e-18
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 87 1e-17
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 87 1e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 86 2e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 3e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 86 4e-17
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 5e-17
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 9e-17
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 9e-17
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 83 2e-16
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 81 6e-16
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 7e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 80 1e-15
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 80 2e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 2e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 79 3e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 78 6e-15
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 8e-15
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 9e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 9e-15
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 2e-14
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 75 4e-14
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 75 5e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 75 6e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 7e-14
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 9e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 9e-14
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 73 2e-13
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 73 3e-13
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 72 3e-13
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 72 6e-13
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 6e-13
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 7e-13
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 71 8e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 8e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 9e-13
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 1e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 70 1e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 5e-12
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 6e-12
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 7e-12
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 68 7e-12
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 7e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 9e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 67 1e-11
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 67 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 66 2e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 66 3e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 9e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 9e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 63 3e-10
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 3e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 3e-10
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 62 5e-10
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 62 6e-10
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 62 6e-10
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 62 6e-10
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 7e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 7e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 61 8e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 61 1e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 60 2e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 59 3e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 3e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 6e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 8e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 9e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 57 1e-08
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 3e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 5e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 6e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 8e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 53 3e-07
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 51 1e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 50 2e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 8e-06
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 183/281 (65%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ +V TF+ L++A KEG + EA+ ++ MVK+ ++P+IV+YSSL++G+C+
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F FMV + DV +Y +I G CK K V+E + EM + ++ +T+ YN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL + A ++ EM G+PPN++TYN LLD LCK+ +++A+ + + ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P +YTY ++++G+CK G+++D ++F ++ +KG +V Y+ MI G+C++G +EA
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L +M+ G +P++ Y +IRA + G+ E + +L++EM
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 35/310 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV---------- 61
T++IL+ C+ + A V M+K G EPNIV+ SSL++GYC K +
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 62 ----------------------NKAKD---IFNFMVQRGVTHDVQSYTIIINGLCKIKMV 96
NKA + + + MV +G D+ +Y +++NGLCK
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
D A++LLN+M K+ + YN++IDGLCK + DA L EM +GI PNV+TY+ L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ LC A L+ + E+ I P+++T++ L+D K G+L +A++++ +++ +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ ++ TYS +I+G+C DEA + M S C PD VTY +I+ K E+ +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 277 LLREMVARSL 286
+ REM R L
Sbjct: 418 VFREMSQRGL 427
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 156/281 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I V T++ L+ LC G +A + + M+++ + P++ ++S+L+D + +
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+ +++ MV+R + + +Y+ +ING C +DEA + M SK D + YN+
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G CK +R + ++ EM+ RG+ N +TYN L+ L ++ D A + K++ G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN+ TY L+DGLCK G+L+ A +F+ + + TY++MI+G CK G ++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L + G PD V Y +I +KG E+A+ L +EM
Sbjct: 522 DLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 153/274 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+ ++V LCK G+ A N+ M + LEP ++ Y++++DG C K
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A ++F M +G+ +V +Y+ +I+ LC +A LL++M +KI D +++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I P+++TY+ L++ C +D A + + + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ TY L+ G CK R+++ E+F+++ +G N TY+++I G + G D A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+ +M S G P+ +TY ++ L K G+ EKA
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 148/274 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ L+ A+ K ++ M G+ N +YS L++ +C ++ A + M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G ++ + + ++NG C K + EA +L+++M +T+ +N+LI GL ++
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L++ M +G P+++TY +++ LCK D A L+ K+E+ ++P + Y ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGLCK + DA +F+++ KG NV TYS +I C G + +A L+S M
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD T+ +I A K+G+ +AEKL EMV RS+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 136/265 (51%)
Query: 23 EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQS 82
E + +A +F MVK P+I+ +S L+ + + + + M G+ H+ +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
Y+I+IN C+ + A ++L +M + + +SL++G C +R +A LV++M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
G PN +T+N L+ L + A+ALI ++ +G QP++ TY V+++GLCK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
A + + V Y+ +IDG CK D+AL L +ME+ G P+ VTY +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 263 RALFKKGENEKAEKLLREMVARSLH 287
L G A +LL +M+ R ++
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKIN 323
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 107/194 (55%), Gaps = 1/194 (0%)
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
NGL ++K+ D+A +L EM + I ++ L+ + K+ + L +M + GIP
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
N TY+ L++ C+ + A+A++ K+ + G +PN+ T + L++G C R+ +A +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ + GY N T++ +I G EA+ L+ +M + GC PD VTYG+++ L K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 268 KGENEKAEKLLREM 281
+G+ + A LL +M
Sbjct: 234 RGDTDLAFNLLNKM 247
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 180/281 (64%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TFN L++A KEG + EA+ +F M+++ ++PNIV+Y+SL++G+C+
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A+ IF MV + DV +Y +ING CK K V + L +M + ++ +T+ Y +
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + +A + +M G+ PN++TYN LLD LCK+ +++A+ + + +++
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++YTY ++ +G+CK G+++D ++F + +KG +V Y+ MI G+CK+GL +EA
Sbjct: 481 MEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAY 540
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L KM+ G +PD+ TY +IRA + G+ + +L++EM
Sbjct: 541 TLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 152/275 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N L+ C + EA + MV+ G +P+ V++++L+ G + ++A + M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V +G D+ +Y +INGLCK D A +LLN+M KI AD + Y+++ID LCK
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA L EM+++GI P+V TY+ L+ LC A L+ + E+ I PN+ T+ L
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D K G+L +A+++F +++ + + N+ TY+ +I+G+C DEA + + M S C
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+PD VTY +I K + +L R+M R L
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 157/287 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + TF LV L + EA + MV +G +P++V+Y ++++G C E
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A ++ N M + + DV Y+ +I+ LCK + VD+A +L EM +K I D Y+S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI LC R DA +L+++M R I PNV+T+N L+D K + A L ++ ++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I PN+ TY L++G C RL +AQ+IF ++ K +V TY+ +I+G+CK + +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L M G + + VTY +I F+ + + A+ + ++MV+ +H
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 153/273 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NI++ LC+ + A + M+K G P+IV+ +SL++G+C +++A + + M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ G D ++T +++GL + EA +L+ M K D + Y ++I+GLCK
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L+N+M I +V+ Y+ ++D LCK HVD A+ L +++ +GI+P+++TY+ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ LC GR DA + D+L + N NV T++ +ID + KEG EA L +M
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P+ VTY +I ++A+++ MV++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 151/274 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV++ ++ T+ ++ LCK G A N+ M K +E ++V YS+++D C +
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ A ++F M +G+ DV +Y+ +I+ LC +A LL++M +KI + + +NS
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I PN++TYN L++ C +D A + + +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ TY L++G CK ++ D E+F+D+ +G N TY+ +I G+ + D A
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M S G P+ +TY ++ L K G+ EKA
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ EA ++F MVK P+IV +S L+ +K+ + M GV+H++ +Y I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+IN LC+ + A ++L +M + NSL++G C R +A LV++M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ +T+ L+ L + + A+AL++++ +G QP++ TY +++GLCK G A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + +V YS +ID CK D+AL L ++M++ G PD TY +I L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 266 FKKGENEKAEKLLREMVARSLH 287
G A +LL +M+ R ++
Sbjct: 286 CNYGRWSDASRLLSDMLERKIN 307
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 136/247 (55%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
G+ N+ +Y+ +++ C +++ A I M++ G + + ++NG C + EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
+L+++M DT+ + +L+ GL + ++ +A LV M +G P+++TY +++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
LCK D A+ L+ K+E+ I+ ++ Y+ ++D LCK + DA +F ++ KG +
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
V TYS +I C G + +A L+S M P+ VT+ +I A K+G+ +AEKL
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 280 EMVARSL 286
EM+ RS+
Sbjct: 335 EMIQRSI 341
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 117/222 (52%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
++++A D+F MV+ + ++ +++ + K+K D S +M + + YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+I+ LC+ + A ++ +M G P+++T N LL+ C + + A+AL+ ++ E
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G QP+ T+T L+ GL + + +A + + +++KG ++ TY +I+G CK G D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L L++KME D V Y +I +L K + A L EM
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L+ + + A+ VF MV G+ PNI++Y++L+DG C ++ KA +F ++
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ + D+ +Y I+ G+CK V++ W L + K + D I YN++I G CK
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A+ L +M G P+ TYN L+ + + LIK++ + TY ++
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 192 MDGLCKVGRL 201
D L GRL
Sbjct: 597 TDMLHD-GRL 605
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 177/281 (62%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TF++L+++ KEG ++EA+ + M+ +G+ P+ ++Y+SL+DG+C
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KA + + MV +G +++++ I+ING CK +D+ L +M + ++ADT+ YN+
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C+L + A +L EM R +PPN++TY LLD LC + ++A+ + +KIE+
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ ++ Y +++ G+C ++ DA ++F + +KG V+TY++MI G CK+G EA
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+L KME G PD TY I+IRA G+ K+ KL+ E+
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 154/275 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N LV LC G EA + MV+ G +PN V+Y +++ C + A ++ M
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+R + D Y+III+GLCK +D A++L NEM K I + I YN LI G C R
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D KL+ +M R I PNV+T++ L+D K + A L K++ +GI P+ TYT L
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK L A ++ ++ KG + N+RT++++I+GYCK D+ L L KM G
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ D VTY +I+ + G+ A++L +EMV+R +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 158/275 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF+ L+ LC EG V EA + MV+ G +P++++ ++L++G CL + +A + + M
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ G + +Y ++N +CK A LL +M + I D + Y+ +IDGLCK
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A+ L NEM +GI N+ITYN L+ C + D L++ + ++ I PN+ T++VL
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D K G+L++A+E+ ++++ +G + TY+ +IDG+CKE D+A ++ M S GC
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ T+ I+I K + +L R+M R +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 158/304 (51%), Gaps = 35/304 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++I+++ LCK G++ A N+F M +G+ NI++Y+ L+ G+C + + M+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R + +V +++++I+ K + EA L EM + I DTI Y SLIDG CK
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A ++V+ M +G PN+ T+N L++ CK++ +D + L +K+ +G+ + TY L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS--- 249
G C++G+L A+E+FQ+++ + N+ TY +++DG C G ++AL + K+E S
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 250 --------------------------------GCIPDAVTYGIIIRALFKKGENEKAEKL 277
G P TY I+I L KKG +AE L
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 278 LREM 281
R+M
Sbjct: 566 FRKM 569
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 157/285 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ I + T +I++ C+ + A + ++K G EPN +++S+L++G CL
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++A ++ + MV+ G D+ + ++NGLC EA L+++M + + Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+++ +CK ++ A +L+ +M R I + + Y+ ++D LCK +D A L ++E +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I N+ TY +L+ G C GR D ++ +D++ + N NV T+SV+ID + KEG EA
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
L +M G PD +TY +I K+ +KA +++ MV++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 154/271 (56%), Gaps = 12/271 (4%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
LV ALCK+ +K G+ N+ + S +++ +C +++ A +++ G
Sbjct: 106 LVLALCKQMELK------------GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ +++ +INGLC V EA L++ M D I N+L++GLC + +A
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
L+++M G PN +TY P+L+V+CKS A+ L++K+EE+ I+ + Y++++DGL
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
CK G L +A +F ++ +KG N+ TY+++I G+C G +D+ L+ M P+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVARSL 286
VT+ ++I + K+G+ +AE+L +EM+ R +
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 139/260 (53%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A ++F M+ P ++ +S L K+ + + M +G+ H++ + +I+I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ + + A+S + ++ +TI +++LI+GLC R +A +LV+ M G
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
P++IT N L++ LC S A+ LI K+ E G QPN TY +++ +CK G+ A E+
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ + + L+ YS++IDG CK G D A L ++ME G + +TY I+I
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 268 KGENEKAEKLLREMVARSLH 287
G + KLLR+M+ R ++
Sbjct: 311 AGRWDDGAKLLRDMIKRKIN 330
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+GL IK D+A L +M + + I ++ L + K ++ L +M +GI
Sbjct: 62 SGLVDIK-ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
N+ T + +++ C+ + A + + KI + G +PN T++ L++GLC GR+ +A E+
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
++ G+ ++ T + +++G C G EA++L+ KM GC P+AVTYG ++ + K
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 268 KGENEKAEKLLREMVARSL 286
G+ A +LLR+M R++
Sbjct: 241 SGQTALAMELLRKMEERNI 259
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 182/281 (64%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TF+ L++A KEG + EA+ ++ M+K+ ++P+I +YSSL++G+C+
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F M+ + +V +Y +I G CK K V+E L EM + ++ +T+ YN+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL + A K+ +M G+PP++ITY+ LLD LCK +++A+ + + +++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++YTY ++++G+CK G+++D ++F + +KG NV Y+ MI G+C++GL +EA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L +M+ G +P++ TY +IRA + G+ + +L++EM
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 164/316 (51%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV---- 61
I ++ ++NIL+ C+ + A V M+K G EP+IV+ SSL++GYC K +
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 62 ----------------------------NKAKD---IFNFMVQRGVTHDVQSYTIIINGL 90
NKA + + + MV RG D+ +Y ++NGL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A SLL +M KI AD + Y ++ID LC + DA L EM+++GI PNV
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+TYN L+ LC A L+ + E+ I PN+ T++ L+D K G+L +A++++ +
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + ++ TYS +I+G+C DEA + M S C P+ VTY +I+ K
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 271 NEKAEKLLREMVARSL 286
E+ +L REM R L
Sbjct: 411 VEEGMELFREMSQRGL 426
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 153/273 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+A+V + +++ALC NV +A N+F M +G+ PN+V+Y+SL+ C + A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + +V +++ +I+ K + EA L +EM + I D Y+SLI+G
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C +R +A + M + PNV+TYN L+ CK+ V+ + L +++ ++G+ N
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+ GL + G AQ+IF+ ++ G ++ TYS+++DG CK G ++AL++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ S PD TY I+I + K G+ E L
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 150/274 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+ +V LCK G++ A ++ M K +E ++V Y++++D C K
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
VN A ++F M +G+ +V +Y +I LC +A LL++M +KI + + +++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I P++ TY+ L++ C +D A + + + +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY L+ G CK R+++ E+F+++ +G N TY+ +I G + G D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+ KM S G PD +TY I++ L K G+ EKA
Sbjct: 451 KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 151/274 (55%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K ++ M + ++ SY+ L++ +C ++ A + M+
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ + + ++NG C K + EA +L+++M + +T+ +N+LI GL ++
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L++ M RG P++ TY +++ LCK +D A++L+KK+E+ I+ ++ YT ++
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LC + DA +F ++ KG NV TY+ +I C G + +A L+S M
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A K+G+ +AEKL EM+ RS+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 137/260 (52%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A ++F MV+ P+IV ++ L+ + + + + M +++D+ SY I+I
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ + A ++L +M D + +SL++G C +R +A LV++M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
PN +T+N L+ L + A+ALI ++ +G QP+++TY +++GLCK G + A +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ + +V Y+ +ID C ++AL L ++M++ G P+ VTY +IR L
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 268 KGENEKAEKLLREMVARSLH 287
G A +LL +M+ R ++
Sbjct: 303 YGRWSDASRLLSDMIERKIN 322
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++ A D+F MVQ + + +++ + K+ D SL M + +I D YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+ C+ + A ++ +M G P+++T + LL+ C + A+AL+ ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
QPN T+ L+ GL + +A + ++ +G ++ TY +++G CK G D A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L L+ KME D V Y II AL A L EM
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 214 bits (546), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 182/281 (64%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TF+ L++A KEG + EA+ ++ M+K+ ++P+I +YSSL++G+C+
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F M+ + +V +Y+ +I G CK K V+E L EM + ++ +T+ Y +
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + +A + +M G+ PN++TYN LLD LCK+ + +A+ + + ++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++YTY ++++G+CK G+++D E+F ++ +KG + NV Y+ MI G+C++G +EA
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L+ KM+ G +P++ TY +IRA + G+ E + +L++EM
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 166/316 (52%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I ++ T++I + C+ + A V A M+K G EP+IV+ SSL++GYC K ++ A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 65 ------------KDIFNF----------------------MVQRGVTHDVQSYTIIINGL 90
D F F MVQRG D+ +Y ++NGL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A SLL +M KI AD + YN++IDGLCK + DA L EM+++GI P+V
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
TY+ L+ LC A L+ + E+ I PN+ T++ L+D K G+L +A++++ +
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + ++ TYS +I+G+C DEA + M S C P+ VTY +I+ K
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 271 NEKAEKLLREMVARSL 286
E+ +L REM R L
Sbjct: 414 VEEGMELFREMSQRGL 429
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 153/273 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+A+V +N +++ LCK ++ +A N+F M +G+ P++ +YSSL+ C + A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + +V +++ +I+ K + EA L +EM + I D Y+SLI+G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C +R +A + M + PNV+TY+ L+ CK+ V+ + L +++ ++G+ N
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G + +AQ +F+ ++ G + N+ TY++++DG CK G +A+++
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ S PD TY I+I + K G+ E +L
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 154/274 (56%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+ +V LCK G++ A ++ M K +E ++V Y++++DG C K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A ++F M +G+ DV +Y+ +I+ LC +A LL++M +KI + + +++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I P++ TY+ L++ C +D A + + + +
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY+ L+ G CK R+++ E+F+++ +G N TY+ +I G+ + D A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M S G P+ +TY I++ L K G+ KA
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 142/265 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ID ++ T++ L+ C + EAK++F +M+ + PN+V+YS+L+ G+C K
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V + ++F M QRG+ + +YT +I+G + + D A + +M S + + + YN
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+DGLCK + A + + + P++ TYN +++ +CK+ V+ L + +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN+ Y ++ G C+ G ++A + + + G N TY+ +I ++G + +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 241 ILMSKMESSGCIPDAVTYGIIIRAL 265
L+ +M S G DA T G++ L
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNML 618
Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 153/274 (55%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K + ++ M G+ ++ +YS ++ +C +++ A + M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ + + ++NG C K + +A +L+++M DT + +LI GL ++
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV++M RG P+++TY +++ LCK +D A++L+KK+E+ I+ ++ Y ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGLCK + DA +F ++ KG +V TYS +I C G + +A L+S M
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A K+G+ +AEKL EM+ RS+
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 16/255 (6%)
Query: 29 AKNVFAVMVKQGL--EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
AK +F QG+ P + S+ +L C + A + I+
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYR--------------EIL 54
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
N L I VD+A L +M + + +N L+ + K+ + L +M GI
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
++ TY+ ++ C+ + A+A++ K+ + G +P++ T + L++G C R+ DA
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+ ++ GY + T++ +I G EA+ L+ +M GC PD VTYG ++ L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 267 KKGENEKAEKLLREM 281
K+G+ + A LL++M
Sbjct: 235 KRGDIDLALSLLKKM 249
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+V+ A D+F MV+ + + +++ + K+ + SL +M + I D Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
I+ C+ + A ++ +M G P+++T + LL+ C S + A+AL+ ++ E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P+ +T+T L+ GL + +A + ++ +G ++ TY +++G CK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L L+ KME D V Y II L K + A L EM
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 178/281 (63%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TF+ L++A KEG + EA+ ++ M+K+ ++P+I +YSSL++G+C+
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F M+ + +V +Y +I G CK K VDE L EM + ++ +T+ Y +
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + +A + +M G+ P+++TY+ LLD LC + V+ A+ + + ++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++YTY ++++G+CK G+++D ++F + +KG NV TY+ M+ G+C++GL +EA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L +M+ G +PD+ TY +IRA + G+ + +L+REM
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 162/316 (51%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I + T++IL+ C+ + A V A M+K G EP+IV+ +SL++G+C ++ A
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 65 ------------KDIFNF----------------------MVQRGVTHDVQSYTIIINGL 90
D F F MV +G D+ +Y I++NGL
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A SLL +M KI + YN++ID LC + DA L EM+++GI PNV
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+TYN L+ LC A L+ + E+ I PN+ T++ L+D K G+L +A++++ +
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + ++ TYS +I+G+C DEA + M S C P+ VTY +I+ K
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 271 NEKAEKLLREMVARSL 286
++ +L REM R L
Sbjct: 412 VDEGMELFREMSQRGL 427
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 152/272 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN L+ L + EA + MV +G +P++V+Y +++G C +++ A + M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
Q + V Y II+ LC K V++A +L EM +K I + + YNSLI LC R
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +L+++M R I PNV+T++ L+D K + A L ++ ++ I P+++TY+ L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G C RL +A+ +F+ ++ K NV TY+ +I G+CK DE + L +M G
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ + VTY +I F+ E + A+ + ++MV+
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 149/273 (54%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V +N +++ALC NV +A N+F M +G+ PN+V+Y+SL+ C + A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + +V +++ +I+ K + EA L +EM + I D Y+SLI+G
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C +R +A + M + PNV+TYN L+ CK+ VD + L +++ ++G+ N
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G + +AQ +F+ ++ G ++ TYS+++DG C G + AL++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ S PD TY I+I + K G+ E L
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 151/274 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV++ ++ T+ I+V LCK G++ A ++ M + +EP +V Y++++D C K
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
VN A ++F M +G+ +V +Y +I LC +A LL++M +KI + + +++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I P++ TY+ L++ C +D A + + + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY L+ G CK R+ + E+F+++ +G N TY+ +I G+ + D A
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
I+ +M S G +PD +TY I++ L G+ E A
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 149/274 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ L+ A+ K ++ M G+ N+ +YS L++ +C +++ A + M+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ + ++NG C + +A SL+ +M D+ +N+LI GL + R+
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV+ M +G P+++TY +++ LCK +D A++L+KK+E+ I+P + Y ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LC + DA +F ++ KG NV TY+ +I C G + +A L+S M
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A K+G+ +AEKL EM+ RS+
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 138/262 (52%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ +A N+F MVK P+IV +S L+ + + + + M G++H++ +Y+I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+IN C+ + A ++L +M D + NSL++G C R DA LV +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ T+N L+ L + + A+AL+ ++ +G QP++ TY ++++GLCK G + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + + V Y+ +ID C ++AL L ++M++ G P+ VTY +IR L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 266 FKKGENEKAEKLLREMVARSLH 287
G A +LL +M+ R ++
Sbjct: 302 CNYGRWSDASRLLSDMIERKIN 323
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 174/281 (61%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ + TFN L++A KEG EA+ + M+K+ ++P+I +Y+SL++G+C+
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KAK +F FMV + D+ +Y +I G CK K V++ L EM + ++ DT+ Y +
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL +A K+ +M G+PP+++TY+ LLD LC + +++A+ + +++
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+ ++Y YT +++G+CK G++ D ++F + +KG NV TY+ MI G C + L EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L+ KM+ G +PD+ TY +IRA + G+ + +L+REM
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 160/316 (50%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I + T+NIL+ C+ + A + M+K G EP+IV+ SSL++GYC K ++ A
Sbjct: 41 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 100
Query: 65 ------------KDIFNF----------------------MVQRGVTHDVQSYTIIINGL 90
D F MVQRG ++ +Y +++NGL
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A++LLN+M + KI AD + +N++ID LCK DA L EM +GI PNV
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+TY+ L+ LC A L+ + E+ I PN+ T+ L+D K G+ +A+++ D
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + ++ TY+ +I+G+C D+A + M S C PD TY +I+ K
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 271 NEKAEKLLREMVARSL 286
E +L REM R L
Sbjct: 341 VEDGTELFREMSHRGL 356
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 154/281 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+ ++V LCK G++ A N+ M +E ++V +++++D C +
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ A ++F M +G+ +V +Y+ +I+ LC +A LL++M KKI + + +N+
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL ++M R I P++ TYN L++ C +D+A + + + +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ TY L+ G CK R++D E+F+++ +G + TY+ +I G +G D A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ +M S G PD +TY I++ L G+ EKA ++ M
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 149/274 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K ++ M + G+ N+ +Y+ L++ +C +++ A + M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + + ++NG C K + +A +L+++M DTI + +LI GL ++
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV+ M RG PN++TY +++ LCK +D A L+ K+E I+ ++ + ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LCK + DA +F+++ KG NV TYS +I C G + +A L+S M
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A K+G+ +AEKL +M+ RS+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 132/252 (52%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
MVK P+I ++ L+ +K+ + + M + G++H++ +Y I+IN C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
+ A +LL +M + +SL++G C +R DA LV++M G P+ IT+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
L+ L + A+AL+ ++ ++G QPN+ TY V+++GLCK G + A + +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+V ++ +ID CK D+AL L +ME+ G P+ VTY +I L G A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 276 KLLREMVARSLH 287
+LL +M+ + ++
Sbjct: 241 QLLSDMIEKKIN 252
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 211 bits (537), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 175/281 (62%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ + TFN L++A KEG EA+ ++ M+K+ ++P+I +Y+SL++G+C+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KAK +F FMV + DV +Y +I G CK K V++ L EM + ++ DT+ Y +
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL +A K+ +M G+PP+++TY+ LLD LC + +++A+ + +++
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+ ++Y YT +++G+CK G++ D ++F + +KG NV TY+ MI G C + L EA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L+ KM+ G +P++ TY +IRA + G+ + +L+REM
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 158/310 (50%), Gaps = 35/310 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA------- 64
T+NIL+ C+ + A + M+K G EP+IV+ SSL++GYC K ++ A
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 65 ------KDIFNF----------------------MVQRGVTHDVQSYTIIINGLCKIKMV 96
D F MVQRG ++ +Y +++NGLCK
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
D A +LLN+M + KI AD + +N++ID LCK DA L EM +GI PNV+TY+ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ LC A L+ + E+ I PN+ T+ L+D K G+ +A++++ D++ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ ++ TY+ +++G+C D+A + M S C PD VTY +I+ K E +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 277 LLREMVARSL 286
L REM R L
Sbjct: 422 LFREMSHRGL 431
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 152/272 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF L+ L EA + MV++G +PN+V+Y +++G C + + A ++ N M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ DV + II+ LCK + VD+A +L EM +K I + + Y+SLI LC R
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +L+++M + I PN++T+N L+D K A L + ++ I P+++TY L
Sbjct: 312 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSL 371
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G C RL A+++F+ ++ K +V TY+ +I G+CK ++ L +M G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ D VTY +I+ LF G+ + A+K+ ++MV+
Sbjct: 432 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 153/281 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+ ++V LCK G+ A N+ M +E ++V +++++D C +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ A ++F M +G+ +V +Y+ +I+ LC +A LL++M KKI + + +N+
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL ++M R I P++ TYN L++ C +D+A + + + +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ TY L+ G CK R++D E+F+++ +G + TY+ +I G +G D A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ +M S G PD +TY I++ L G+ EKA ++ M
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 134/262 (51%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ +A +F MVK P+IV ++ L+ +K+ + + M + + H + +Y I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+IN C+ + A +LL +M + +SL++G C +R DA LV++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ IT+ L+ L + A+AL+ ++ ++G QPN+ TY V+++GLCK G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + +V ++ +ID CK D+AL L +ME+ G P+ VTY +I L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 266 FKKGENEKAEKLLREMVARSLH 287
G A +LL +M+ + ++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKIN 327
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++ A +F MV+ + + +++ + K+K D SL +M +I+ YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+ C+ + A L+ +M G P+++T + LL+ C + A+AL+ ++ E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P+ T+T L+ GL + +A + ++ +G N+ TY V+++G CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L L++KME++ D V + II +L K + A L +EM + +
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 178/281 (63%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I +V F+ L++ KEG ++EA+ + M+++G+ P+ V+Y+SL+DG+C +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KA + + MV +G +++++ I+ING CK ++D+ L +M + ++ADT+ YN+
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C+L + A +L EM R + P++++Y LLD LC + ++A+ + +KIE+
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ ++ Y +++ G+C ++ DA ++F + +KG +V+TY++MI G CK+G EA
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+L KME G P+ TY I+IRA +G+ K+ KL+ E+
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 155/276 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N LV LC G V +A + MV+ G +PN V+Y ++ C + A ++ M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+R + D Y+III+GLCK +D A++L NEM K AD I Y +LI G C R
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D KL+ +M R I P+V+ ++ L+D K + A L K++ ++GI P+ TYT L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK +L A + ++ KG N+RT++++I+GYCK L D+ L L KM G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ D VTY +I+ + G+ E A++L +EMV+R +
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 161/304 (52%), Gaps = 35/304 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++I+++ LCK+G++ A N+F M +G + +I+ Y++L+ G+C + + M+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R +T DV +++ +I+ K + EA L EM + I DT+ Y SLIDG CK +
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A +++ M +G PN+ T+N L++ CK++ +D + L +K+ +G+ + TY L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS--- 249
G C++G+L+ A+E+FQ+++ + ++ +Y +++DG C G ++AL + K+E S
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 250 --------------------------------GCIPDAVTYGIIIRALFKKGENEKAEKL 277
G PD TY I+I L KKG +A+ L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 278 LREM 281
R+M
Sbjct: 550 FRKM 553
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 154/275 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF+ L+ LC EG V EA + MV+ G +P +++ ++L++G CL +V+ A + + M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ G + +Y ++ +CK A LL +M +KI D + Y+ +IDGLCK
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A+ L NEM +G ++I Y L+ C + D L++ + ++ I P++ ++ L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D K G+L++A+E+ ++++ +G + + TY+ +IDG+CKE D+A ++ M S GC
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ T+ I+I K + +L R+M R +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 139/248 (56%)
Query: 39 QGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDE 98
+G+ N+ + S +++ C ++++ A +++ G D +++ +INGLC V E
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 99 AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
A L++ M I N+L++GLC + DA L++ M G PN +TY P+L
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
V+CKS A+ L++K+EE+ I+ + Y++++DGLCK G L +A +F ++ IKG+
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ Y+ +I G+C G +D+ L+ M PD V + +I K+G+ +AE+L
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 279 REMVARSL 286
+EM+ R +
Sbjct: 341 KEMIQRGI 348
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 138/259 (53%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A ++F M + P ++ +S L K+ + D+ M +G+ H++ + +I+I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ + + A+S + ++ DT+ +++LI+GLC R +A +LV+ M G
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
P +IT N L++ LC + V A+ LI ++ E G QPN TY ++ +CK G+ A E+
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ + + L+ YS++IDG CK+G D A L ++ME G D + Y +IR
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 268 KGENEKAEKLLREMVARSL 286
G + KLLR+M+ R +
Sbjct: 295 AGRWDDGAKLLRDMIKRKI 313
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 102/190 (53%)
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
D+A L EM + I ++ L + + ++ L +M +GI N+ T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
++ C+ + A + + KI + G +P+ T++ L++GLC GR+ +A E+ ++ G+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ T + +++G C G +A++L+ +M +G P+ VTYG +++ + K G+ A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 277 LLREMVARSL 286
LLR+M R +
Sbjct: 234 LLRKMEERKI 243
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 165/264 (62%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I +V TF+ L++ KEG + EAK ++ M+ +G+ P+ ++Y+SL+DG+C
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A +F+ MV +G D+ +Y+I+IN CK K VD+ L E+ SK +I +TI YN+
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G C+ + A +L EM RG+PP+V+TY LLD LC + +++A+ + +K+++
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ + Y +++ G+C ++ DA +F + KG +V TY+VMI G CK+G EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 241 ILMSKMESSGCIPDAVTYGIIIRA 264
+L KM+ GC PD TY I+IRA
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRA 569
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 156/275 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T + L+ LC +G V EA + MV+ G +P+ V+Y +++ C A D+F M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+R + V Y+I+I+ LCK D+A SL NEM K I AD + Y+SLI GLC +
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D K++ EM R I P+V+T++ L+DV K + A L ++ +GI P+ TY L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK L +A ++F ++ KG ++ TYS++I+ YCK D+ + L ++ S G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
IP+ +TY ++ + G+ A++L +EMV+R +
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 160/281 (56%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++ I A+V T++ L+ LC +G + + M+ + + P++V++S+L+D + +
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +AK+++N M+ RG+ D +Y +I+G CK + EA + + M SK D + Y+
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+ CK +R D +L E++ +G+ PN ITYN L+ C+S ++ A L +++ +G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P++ TY +L+DGLC G L A EIF+ + L + Y+++I G C D+A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L + G PD VTY ++I L KKG +A+ L R+M
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 151/270 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ ++ LCK GN A ++F M ++ ++ ++V YS ++D C + A +FN M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G+ DV +Y+ +I GLC D+ +L EM + II D + +++LID K +
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L NEM RGI P+ ITYN L+D CK + + A + + +G +P++ TY++L
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ CK R+ D +F++I KG N TY+ ++ G+C+ G + A L +M S G
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P VTYGI++ L GE KA ++ +M
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 152/275 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF+ LV C EG V EA + MV+ P++V+ S+L++G CL V++A + + M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ G D +Y ++N LCK A L +M + I A + Y+ +ID LCK
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA L NEM +GI +V+TY+ L+ LC D +++++ + I P++ T++ L
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D K G+L +A+E++ +++ +G + TY+ +IDG+CKE EA + M S GC
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD VTY I+I + K + +L RE+ ++ L
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 148/274 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L A+ + M G+E ++ + + +++ YC K++ A +
Sbjct: 73 FNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAW 132
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D +++ ++NG C V EA +L++ M K D + ++LI+GLC R
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVS 192
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L++ M G P+ +TY P+L+ LCKS + A+ L +K+EE+ I+ ++ Y++++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LCK G DA +F ++ +KG +V TYS +I G C +G +D+ ++ +M I
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD VT+ +I K+G+ +A++L EM+ R +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 130/228 (57%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + ++ T++IL+ + CK V + +F + +GL PN ++Y++L+ G+C +
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+N AK++F MV RGV V +Y I+++GLC +++A + +M ++ YN
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G+C + DAW L ++ +G+ P+V+TYN ++ LCK + A L +K++E G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
P+ +TY +L+ L + E+ +++ + G++ + T ++ID
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
V +A ++F M++ P + ++ L K+ + M G+ HD+ + TI
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+IN C+ K + A+S+L DTI +++L++G C R +A LV+ M
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+++T + L++ LC V A+ LI ++ E G QP+ TY +++ LCK G A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
++F+ + + +V YS++ID CK+G FD+AL L ++ME G D VTY +I L
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 266 FKKGENEKAEKLLREMVARSL 286
G+ + K+LREM+ R++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNI 311
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 172/281 (61%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + I V TFN+L++ KEG ++EA ++ M+ +G+ PNI++Y++LMDGYC+
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A ++ + MV+ + D+ ++T +I G C +K VD+ + + + ++A+ + Y+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G C+ + A +L EM G+ P+V+TY LLD LC + +++A+ + + +++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ + YT +++G+CK G+++DA +F + KG NV TY+VMI G CK+G EA
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
IL+ KME G P+ TY +IRA + G+ + KL+ EM
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 184 bits (468), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 160/277 (57%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ + TFN L++ L EG V EA + MV+ G +P++V+Y+S+++G C + + A D
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M +R V DV +Y+ II+ LC+ +D A SL EM +K I + + YNSL+ GLC
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K + D L+ +M R I PNVIT+N LLDV K + A L K++ +GI PN+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY LMDG C RL +A + ++ + ++ T++ +I GYC D+ + + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
G + +AVTY I+++ + G+ + AE+L +EMV+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 145/260 (55%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A +F M++ P++V +S K+ N D + G+ H++ + I+I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ A+S+L ++ DT +N+LI GL + +A LV+ M G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
P+V+TYN +++ +C+S A+ L++K+EE+ ++ +++TY+ ++D LC+ G + A +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
F+++ KG +V TY+ ++ G CK G +++ +L+ M S +P+ +T+ +++ K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 268 KGENEKAEKLLREMVARSLH 287
+G+ ++A +L +EM+ R +
Sbjct: 311 EGKLQEANELYKEMITRGIS 330
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 142/275 (51%), Gaps = 13/275 (4%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A + FN++++ CK+ + G+ NI + + +++ +C + A +
Sbjct: 99 ARTKQFNLVLD-FCKQLEL------------NGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+++ G D ++ +I GL V EA L++ M D + YNS+++G+C+
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ A L+ +M R + +V TY+ ++D LC+ +D AI+L K++E +GI+ ++ T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y L+ GLCK G+ D + +D++ + NV T++V++D + KEG EA L +M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ G P+ +TY ++ + +A +L MV
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+G+ IK D+A +L EM + + + ++ + + ++ ++ GI
Sbjct: 62 SGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
N+ T N +++ C+ A +++ K+ + G +P+ T+ L+ GL G++ +A +
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
++ G +V TY+ +++G C+ G AL L+ KME D TY II +L +
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 268 KGENEKAEKLLREMVARSL 286
G + A L +EM + +
Sbjct: 241 DGCIDAAISLFKEMETKGI 259
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 163/257 (63%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TFN L++A KEG + EA+ ++ M+K+ ++P+I +YSSL++G+C+
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F M+ + +V +Y +ING CK K +DE L EM + ++ +T+ Y +
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + +A + +M G+ PN++TYN LLD LCK+ +++A+ + + ++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P +YTY ++++G+CK G+++D ++F + +KG +V Y+ MI G+C++GL +EA
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 241 ILMSKMESSGCIPDAVT 257
L KM G +PD+ T
Sbjct: 561 ALFRKMREDGPLPDSGT 577
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 164/316 (51%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I + T+NIL+ C+ + A + M+K G EP+IV+ SSL++GYC K ++ A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 65 ------------KDIFNF----------------------MVQRGVTHDVQSYTIIINGL 90
D F MVQRG ++ +Y +++NGL
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A++LLN+M + KI A+ + Y+++ID LCK DA L EM ++G+ PNV
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
ITY+ L+ LC A L+ + E+ I PN+ T+ L+D K G+L +A++++ +
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE 355
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + ++ TYS +I+G+C DEA + M S C P+ VTY +I K
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 271 NEKAEKLLREMVARSL 286
++ +L REM R L
Sbjct: 416 IDEGVELFREMSQRGL 431
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 158/276 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF L+ L EA + MV++G +PN+V+Y +++G C +++ A ++ N M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ +V Y+ +I+ LCK + D+A +L EM +K + + I Y+SLI LC ER
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +L+++M R I PNV+T+N L+D K + A L ++ ++ I P+++TY+ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G C RL +A+ +F+ ++ K NV TY+ +I+G+CK DE + L +M G
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ + VTY +I F+ + + A+ + ++MV+ +H
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 154/276 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ V T++ L+ LC +A + + M+++ + PN+V++++L+D + ++ +A+
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+++ M++R + D+ +Y+ +ING C +DEA + M SK + + YN+LI+G
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R + +L EM+ RG+ N +TY L+ ++ D A + K++ G+ PN+
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+DGLCK G+L+ A +F+ + + TY++MI+G CK G ++ L
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G PD + Y +I +KG E+A+ L R+M
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 152/273 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+A V ++ ++++LCK + +A N+F M +G+ PN+++YSSL+ C + + A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + +V ++ +I+ K + EA L +EM + I D Y+SLI+G
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C +R +A + M + PNV+TYN L++ CK+ +D + L +++ ++G+ N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G + +AQ +F+ ++ G + N+ TY+ ++DG CK G ++A+++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ S P TY I+I + K G+ E L
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 151/274 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+ ++V LCK G++ A N+ M +E N+V YS+++D C +
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A ++F M +GV +V +Y+ +I+ LC + +A LL++M +KI + + +N+
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL +EM R I P++ TY+ L++ C +D A + + + +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY L++G CK R+ + E+F+++ +G N TY+ +I G+ + D A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M S G P+ +TY ++ L K G+ EKA
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 147/274 (53%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K ++ M + G+ N+ +Y+ L++ +C +++ A + M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + + ++NG C K + +A +L+++M DTI + +LI GL ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV+ M RG PN++TY +++ LCK +D A L+ K+E I+ N+ Y+ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LCK DA +F ++ KG NV TYS +I C + +A L+S M
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A K+G+ +AEKL EM+ RS+
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 137/262 (52%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ +A +F MVK P+I ++ L+ +K+ + + M + G++H++ +Y I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+IN C+ + A +LL +M + +SL++G C +R DA LV++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ IT+ L+ L + A+AL+ ++ ++G QPN+ TY V+++GLCK G + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + NV YS +ID CK D+AL L ++ME+ G P+ +TY +I L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 266 FKKGENEKAEKLLREMVARSLH 287
A +LL +M+ R ++
Sbjct: 306 CNYERWSDASRLLSDMIERKIN 327
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
I+ NGL +K+ D+A L M + + +N L+ + K+++ L +M
Sbjct: 56 ILRNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
GI N+ TYN L++ C+ + A+AL+ K+ + G +P++ T + L++G C R+ DA
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+ ++ GY + T++ +I G EA+ L+ +M GC P+ VTYG+++
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 265 LFKKGENEKAEKLLREMVA 283
L K+G+ + A LL +M A
Sbjct: 235 LCKRGDIDLAFNLLNKMEA 253
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 112/222 (50%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++ A +F MV+ + + +++ + K+K D SL +M I + YN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+ C+ + A L+ +M G P+++T + LL+ C + A+AL+ ++ E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P+ T+T L+ GL + +A + ++ +G N+ TY V+++G CK G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L++KME++ + V Y +I +L K + A L EM
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 168/281 (59%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I V TF++L+++ KEG ++EA + M+++G+ PN ++Y+SL+DG+C
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A + + M+ +G D+ ++ I+ING CK +D+ L EM + +IA+T+ YN+
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G C+ + A KL EM R + P++++Y LLD LC + +++A+ + KIE+
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ ++ Y +++ G+C ++ DA ++F + +KG L+ R Y++MI C++ +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
IL KM G PD +TY I+IRA + A +L+ EM
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 160/276 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N LV LC G V +A + MV+ G +PN V+Y +++ C + A ++ M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+R + D Y+III+GLCK +D A++L NEM K AD I YN+LI G C R
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D KL+ +M R I PNV+T++ L+D K + A L+K++ ++GI PN TY L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK RL++A ++ ++ KG + ++ T++++I+GYCK D+ L L +M G
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
I + VTY +++ + G+ E A+KL +EMV+R +
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 156/274 (56%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ LC E V EA + MV+ G +P +++ ++L++G CL +V+ A + + MV
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + +Y ++N +CK A LL +M + I D + Y+ +IDGLCK
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A+ L NEM +G ++ITYN L+ C + D L++ + ++ I PN+ T++VL+
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D K G+L++A ++ ++++ +G N TY+ +IDG+CKE +EA+ ++ M S GC
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD +T+ I+I K + +L REM R +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 154/253 (60%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++I+++ LCK+G++ A N+F M +G + +I++Y++L+ G+C + + M+
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R ++ +V +++++I+ K + EA LL EM + I +TI YNSLIDG CK R
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A ++V+ M +G P+++T+N L++ CK++ +D + L +++ +G+ N TY L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G C+ G+L+ A+++FQ+++ + ++ +Y +++DG C G ++AL + K+E S
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 253 PDAVTYGIIIRAL 265
D Y III +
Sbjct: 506 LDIGIYMIIIHGM 518
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 153/274 (55%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L A+ K + + M +G+ +I + S +++ +C ++++ A ++
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D + ++NGLC V EA L++ M I N+L++GLC +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA L++ M G PN +TY P+L+V+CKS A+ L++K+EE+ I+ + Y++++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGLCK G L +A +F ++ IKG+ ++ TY+ +I G+C G +D+ L+ M
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ ++I + K+G+ +A++LL+EM+ R +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 152/279 (54%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T +I++ C+ + A + ++K G EP+ V +++L++G CL V++A
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + MV+ G + + ++NGLC V +A L++ M + + Y +++ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK ++ A +L+ +M R I + + Y+ ++D LCK +D A L ++E +G + ++
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+ G C GR D ++ +D++ + + NV T+SV+ID + KEG EA L+ +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
M G P+ +TY +I K+ E+A +++ M+++
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 137/260 (52%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A ++F M++ P ++ ++ L K+ + M +G+ H + + +I+I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ + + A+S + ++ DT+ +N+L++GLC R +A +LV+ M G
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
P +IT N L++ LC + V A+ LI ++ E G QPN TY +++ +CK G+ A E+
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ + + L+ YS++IDG CK+G D A L ++ME G D +TY +I
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 268 KGENEKAEKLLREMVARSLH 287
G + KLLR+M+ R +
Sbjct: 311 AGRWDDGAKLLRDMIKRKIS 330
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 102/195 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + A T+N LV+ C+ G ++ AK +F MV + + P+IVSY L+DG C E
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ KA +IF + + + D+ Y III+G+C VD+AW L + K + D YN
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I LC+ + A L +M G P+ +TYN L+ A LI++++ G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 181 IQPNMYTYTVLMDGL 195
++ T ++++ L
Sbjct: 609 FPADVSTVKMVINML 623
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ + A D+F M+Q V + + + + K K + +L +M SK I +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+I+ C+ + A+ + ++ G P+ + +N LL+ LC V A+ L+ ++ E
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P + T L++GLC G++ DA + ++ G+ N TY +++ CK G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ L+ KME DAV Y III L K G + A L EM
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 105/199 (52%), Gaps = 1/199 (0%)
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+GL IK D+A L +M + + I +N L + K ++ L +M +GI
Sbjct: 62 SGLVGIK-ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
++ T + +++ C+ + A + + KI + G +P+ + L++GLC R+ +A E+
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
++ G+ + T + +++G C G +A++L+ +M +G P+ VTYG ++ + K
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 268 KGENEKAEKLLREMVARSL 286
G+ A +LLR+M R++
Sbjct: 241 SGQTALAMELLRKMEERNI 259
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 169/279 (60%), Gaps = 3/279 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V TFN L++A KEG +A+ ++ M++ + PNI +Y+SL++G+C+ V++A+
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M +G DV +YT +ING CK K VD+A + EM K + +TI Y +LI G
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL---IKKIEEQGIQ 182
++ + A ++ + M RG+PPN+ TYN LL LC + V +A+ + ++K E G+
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
PN++TY VL+ GLC G+L+ A +F+D+ + ++ + TY+++I G CK G A+ L
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ S G P+ VTY +I LF++G +A L R+M
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 157/281 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ T N+L+ C+ A + M+K G EP+IV+++SL++G+CL + +A
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N MV+ G+ DV YT II+ LCK V+ A SL ++M + I D + Y SL++GL
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C R DA L+ M R I P+VIT+N L+D K A L ++ I PN+
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+TYT L++G C G + +A+++F + KG +V Y+ +I+G+CK D+A+ + +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M G + +TY +I+ + G+ A+++ MV+R +
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 151/281 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ TF L+ C ++EA ++ MV+ G++P++V Y++++D C VN A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F+ M G+ DV YT ++NGLC +A SLL M +KI D I +N+LID
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + DA +L NEM I PN+ TY L++ C VD A + +E +G P++
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
YT L++G CK ++ DA +IF ++ KG N TY+ +I G+ + G + A + S
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M S G P+ TY +++ L G+ +KA + +M R +
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 35/294 (11%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
EA ++F MV+ P+I+ ++ L++ +K+ + ++ + + GV+HD+ + +++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
N C+ A S L +M D + + SLI+G C R +A +VN+M GI
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA--- 204
P+V+ Y ++D LCK+ HV+ A++L ++E GI+P++ YT L++GLC GR +DA
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 205 --------------------------------QEIFQDILIKGYNLNVRTYSVMIDGYCK 232
+E++ +++ N+ TY+ +I+G+C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
EG DEA + ME+ GC PD V Y +I K + + A K+ EM + L
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 16/264 (6%)
Query: 39 QGLEPNIVSYSSLMD------GYCLVKEV----------NKAKDIFNFMVQRGVTHDVQS 82
+G +S+S L+D +C +E+ N+A D+F MV+ +
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
+T ++N + K+K D +L + + + D N L++ C+ + + A + +M
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
G P+++T+ L++ C + ++ A++++ ++ E GI+P++ YT ++D LCK G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
A +F + G +V Y+ +++G C G + +A L+ M PD +T+ +I
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 263 RALFKKGENEKAEKLLREMVARSL 286
A K+G+ AE+L EM+ S+
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSI 278
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 73/255 (28%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I + T+ L+ C EG V EA+ +F +M +G P++V+Y+SL++G+C K+
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 61 V-----------------------------------NKAKDIFNFMVQRGVTHDVQSYTI 85
V N A+++F+ MV RGV ++++Y +
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKI--IADTI-CYNSLIDGLC---KLERSF------- 132
+++ LC V +A + +M +++ +A I YN L+ GLC KLE++
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452
Query: 133 -------------------DAWKLVNEMN------HRGIPPNVITYNPLLDVLCKSHHVD 167
A K+ N +N +G+ PNV+TY ++ L +
Sbjct: 453 KREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKH 512
Query: 168 RAIALIKKIEEQGIQ 182
A L +K++E G+
Sbjct: 513 EAHVLFRKMKEDGVS 527
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 165/311 (53%), Gaps = 35/311 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN LV LCK G+VK A + VM+++G +P++ +Y+S++ G C + EV +A ++ + M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ R + + +Y +I+ LCK V+EA L + SK I+ D +NSLI GLC
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A +L EM +G P+ TYN L+D LC +D A+ ++K++E G ++ TY L
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK------ 245
+DG CK + ++A+EIF ++ + G + N TY+ +IDG CK ++A LM +
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 246 -----------------------------MESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
M S+GC PD VTYG +I L K G E A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 277 LLREMVARSLH 287
LLR + + ++
Sbjct: 597 LLRSIQMKGIN 607
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 153/274 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ LCKE V+EA + V+ +G+ P++ +++SL+ G CL + A ++F M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G D +Y ++I+ LC +DEA ++L +M I YN+LIDG CK ++
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A ++ +EM G+ N +TYN L+D LCKS V+ A L+ ++ +G +P+ YTY L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ C+ G +K A +I Q + G ++ TY +I G CK G + A L+ ++ G
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
Y +I+ LF+K + +A L REM+ ++
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 157/272 (57%), Gaps = 1/272 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ N++V CKEG V++A N M Q G P+ ++++L++G C V A +I +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M+Q G DV +Y +I+GLCK+ V EA +L++M ++ +T+ YN+LI LCK +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A +L + +GI P+V T+N L+ LC + + A+ L +++ +G +P+ +TY +
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+D LC G+L +A + + + + G +V TY+ +IDG+CK EA + +ME G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
++VTY +I L K E A +L+ +M+
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 145/263 (55%), Gaps = 1/263 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V TFN L++ LC N + A +F M +G EP+ +Y+ L+D C ++++A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M G V +Y +I+G CK EA + +EM + +++ YN+LIDGLCK
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R DA +L+++M G P+ TYN LL C+ + +A +++ + G +P++ T
Sbjct: 518 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 577
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM- 246
Y L+ GLCK GR++ A ++ + I +KG NL Y+ +I G ++ EA+ L +M
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 247 ESSGCIPDAVTYGIIIRALFKKG 269
E + PDAV+Y I+ R L G
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGG 660
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 159/317 (50%), Gaps = 36/317 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGY----- 55
M + I +V TFN+L++ALC+ ++ A + M GL P+ +++++M GY
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 56 ---------------CLVKEVN------------KAKDIFNFMV----QRGVTHDVQSYT 84
C V+ + +D NF+ Q G D ++
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
++NGLCK V A +++ M + D YNS+I GLCKL +A +++++M R
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
PN +TYN L+ LCK + V+ A L + + +GI P++ T+ L+ GLC + A
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
E+F+++ KG + TY+++ID C +G DEAL ++ +ME SGC +TY +I
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 265 LFKKGENEKAEKLLREM 281
K + +AE++ EM
Sbjct: 480 FCKANKTREAEEIFDEM 496
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 150/282 (53%), Gaps = 12/282 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSS----LMDGYCL-VKEVNKAK 65
TF IL+E+ + E +V M+ + GL+P+ Y+ L+DG L + E++ AK
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAK 179
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
M G+ DV ++ ++I LC+ + A +L +M S ++ D + +++ G
Sbjct: 180 -----MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGY 234
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPN 184
+ A ++ +M G + ++ N ++ CK V+ A+ I+++ Q G P+
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
YT+ L++GLCK G +K A EI +L +GY+ +V TY+ +I G CK G EA+ ++
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+M + C P+ VTY +I L K+ + E+A +L R + ++ +
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+++ + T+N L+ C+ G++K+A ++ M G EP+IV+Y +L+ G C
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYN 119
V A + + +G+ +Y +I GL + + EA +L EM + D + Y
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 120 SLIDGLC 126
+ GLC
Sbjct: 651 IVFRGLC 657
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 160/274 (58%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ ++ LC+ + EA+ F+ M++QG+ P+ V Y++L+DG+C ++ A F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
R +T DV +YT II+G C+I + EA L +EM K + D++ + LI+G CK
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA+++ N M G PNV+TY L+D LCK +D A L+ ++ + G+QPN++TY ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+GLCK G +++A ++ + G N + TY+ ++D YCK G D+A ++ +M G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P VT+ +++ G E EKLL M+A+ +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 172/313 (54%), Gaps = 35/313 (11%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK------ 63
V ++NI++ +C+ G +KEA ++ +M +G P+++SYS++++GYC E++K
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 64 -----------------------------AKDIFNFMVQRGVTHDVQSYTIIINGLCKIK 94
A++ F+ M+++G+ D YT +I+G CK
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 95 MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
+ A EMHS+ I D + Y ++I G C++ +A KL +EM +G+ P+ +T+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L++ CK+ H+ A + + + G PN+ TYT L+DGLCK G L A E+ ++
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G N+ TY+ +++G CK G +EA+ L+ + E++G D VTY ++ A K GE +KA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 275 EKLLREMVARSLH 287
+++L+EM+ + L
Sbjct: 546 QEILKEMLGKGLQ 558
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 166/286 (58%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q I + + L++ CK G+++ A F M + + P++++Y++++ G+C + +
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A +F+ M +G+ D ++T +ING CK + +A+ + N M + + Y +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDGLCK A +L++EM G+ PN+ TYN +++ LCKS +++ A+ L+ + E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ + TYT LMD CK G + AQEI +++L KG + T++V+++G+C G+ ++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L++ M + G P+A T+ +++ + + A + ++M +R +
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 155/281 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V T+ ++ C+ G++ EA +F M +GLEP+ V+++ L++GYC + A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N M+Q G + +V +YT +I+GLCK +D A LL+EM + + YNS+++GL
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +A KLV E G+ + +TY L+D CKS +D+A ++K++ +G+QP +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ VLM+G C G L+D +++ +L KG N T++ ++ YC A +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M S G PD TY +++ K ++A L +EM +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 154/286 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + ++ + TF L+ CK G++K+A V M++ G PN+V+Y++L+DG C +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A ++ + M + G+ ++ +Y I+NGLCK ++EA L+ E + + ADT+ Y +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+D CK A +++ EM +G+ P ++T+N L++ C ++ L+ + +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I PN T+ L+ C LK A I++D+ +G + +TY ++ G+CK EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L +M+ G TY ++I+ K+ + +A ++ +M L
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 155/310 (50%), Gaps = 36/310 (11%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE------------------------- 42
++ R F++ + L G ++EA+ VF M+ GL
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 232
Query: 43 -----P------NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC 91
P N+ SY+ ++ C + + +A + M +G T DV SY+ ++NG C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+ +D+ W L+ M K + ++ Y S+I LC++ + +A + +EM +GI P+ +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
Y L+D CK + A ++ + I P++ TYT ++ G C++G + +A ++F ++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
KG + T++ +I+GYCK G +A + + M +GC P+ VTY +I L K+G+
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 272 EKAEKLLREM 281
+ A +LL EM
Sbjct: 473 DSANELLHEM 482
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ V T+ L++ LCKEG++ A + M K GL+PNI +Y+S+++G C
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A + G+ D +YT +++ CK +D+A +L EM K + + +N
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++G C D KL+N M +GI PN T+N L+ C +++ A A+ K + +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P+ TY L+ G CK +K+A +FQ++ KG++++V TYSV+I G+ K F EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 241 ILMSKMESSGCIPD 254
+ +M G D
Sbjct: 687 EVFDQMRREGLAAD 700
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 96/188 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++A+ T+ L++A CK G + +A+ + M+ +GL+P IV+++ LM+G+CL + +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N+M+ +G+ + ++ ++ C + A ++ +M S+ + D Y +L+ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +AW L EM +G +V TY+ L+ K A + ++ +G+ +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 186 YTYTVLMD 193
+ D
Sbjct: 702 EIFDFFSD 709
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + + TFN+L+ C G +++ + + M+ +G+ PN +++SL+ YC+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A I+ M RGV D ++Y ++ G CK + + EAW L EM K Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
LI G K ++ +A ++ ++M G+ + ++ D K D + I +I E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKS-HHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A ++ +M + G+ +V + N L L K + AI + ++ E G+ N+ +Y ++
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ +C++GR+K+A + + +KGY +V +YS +++GYC+ G D+ L+ M+ G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P++ YG II L + + +AE+ EM+ + +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-LERSFDAWKL 137
D + + + L ++ EA + +M + ++ N + L K ++ A +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
E G+ NV +YN ++ +C+ + A L+ +E +G P++ +Y+ +++G C+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L ++ + + KG N Y +I C+ EA S+M G +PD V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
Y +I K+G+ A K EM +R +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 160/274 (58%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ ++ LC+ + EA+ F+ M++QG+ P+ V Y++L+DG+C ++ A F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
R +T DV +YT II+G C+I + EA L +EM K + D++ + LI+G CK
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA+++ N M G PNV+TY L+D LCK +D A L+ ++ + G+QPN++TY ++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+GLCK G +++A ++ + G N + TY+ ++D YCK G D+A ++ +M G
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P VT+ +++ G E EKLL M+A+ +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 172/313 (54%), Gaps = 35/313 (11%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK------ 63
V ++NI++ +C+ G +KEA ++ +M +G P+++SYS++++GYC E++K
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 64 -----------------------------AKDIFNFMVQRGVTHDVQSYTIIINGLCKIK 94
A++ F+ M+++G+ D YT +I+G CK
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 95 MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
+ A EMHS+ I D + Y ++I G C++ +A KL +EM +G+ P+ +T+
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L++ CK+ H+ A + + + G PN+ TYT L+DGLCK G L A E+ ++
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G N+ TY+ +++G CK G +EA+ L+ + E++G D VTY ++ A K GE +KA
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 275 EKLLREMVARSLH 287
+++L+EM+ + L
Sbjct: 546 QEILKEMLGKGLQ 558
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 166/286 (58%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q I + + L++ CK G+++ A F M + + P++++Y++++ G+C + +
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A +F+ M +G+ D ++T +ING CK + +A+ + N M + + Y +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDGLCK A +L++EM G+ PN+ TYN +++ LCKS +++ A+ L+ + E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ + TYT LMD CK G + AQEI +++L KG + T++V+++G+C G+ ++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L++ M + G P+A T+ +++ + + A + ++M +R +
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 155/281 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V T+ ++ C+ G++ EA +F M +GLEP+ V+++ L++GYC + A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N M+Q G + +V +YT +I+GLCK +D A LL+EM + + YNS+++GL
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +A KLV E G+ + +TY L+D CKS +D+A ++K++ +G+QP +
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ VLM+G C G L+D +++ +L KG N T++ ++ YC A +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M S G PD TY +++ K ++A L +EM +
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 154/286 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + ++ + TF L+ CK G++K+A V M++ G PN+V+Y++L+DG C +
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A ++ + M + G+ ++ +Y I+NGLCK ++EA L+ E + + ADT+ Y +
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+D CK A +++ EM +G+ P ++T+N L++ C ++ L+ + +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I PN T+ L+ C LK A I++D+ +G + +TY ++ G+CK EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L +M+ G TY ++I+ K+ + +A ++ +M L
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 155/310 (50%), Gaps = 36/310 (11%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE------------------------- 42
++ R F++ + L G ++EA+ VF M+ GL
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAII 232
Query: 43 -----P------NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC 91
P N+ SY+ ++ C + + +A + M +G T DV SY+ ++NG C
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+ +D+ W L+ M K + ++ Y S+I LC++ + +A + +EM +GI P+ +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
Y L+D CK + A ++ + I P++ TYT ++ G C++G + +A ++F ++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
KG + T++ +I+GYCK G +A + + M +GC P+ VTY +I L K+G+
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 272 EKAEKLLREM 281
+ A +LL EM
Sbjct: 473 DSANELLHEM 482
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 137/254 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ V T+ L++ LCKEG++ A + M K GL+PNI +Y+S+++G C
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A + G+ D +YT +++ CK +D+A +L EM K + + +N
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++G C D KL+N M +GI PN T+N L+ C +++ A A+ K + +G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P+ TY L+ G CK +K+A +FQ++ KG++++V TYSV+I G+ K F EA
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 241 ILMSKMESSGCIPD 254
+ +M G D
Sbjct: 687 EVFDQMRREGLAAD 700
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 96/188 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++A+ T+ L++A CK G + +A+ + M+ +GL+P IV+++ LM+G+CL + +
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N+M+ +G+ + ++ ++ C + A ++ +M S+ + D Y +L+ G
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +AW L EM +G +V TY+ L+ K A + ++ +G+ +
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 186 YTYTVLMD 193
+ D
Sbjct: 702 EIFDFFSD 709
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + + TFN+L+ C G +++ + + M+ +G+ PN +++SL+ YC+
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A I+ M RGV D ++Y ++ G CK + + EAW L EM K Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
LI G K ++ +A ++ ++M G+ + ++ D K D + I +I E
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 87/155 (56%), Gaps = 1/155 (0%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKS-HHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A ++ +M + G+ +V + N L L K + AI + ++ E G+ N+ +Y ++
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ +C++GR+K+A + + +KGY +V +YS +++GYC+ G D+ L+ M+ G
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 312
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P++ YG II L + + +AE+ EM+ + +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 1/209 (0%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-LERSFDAWKL 137
D + + + L ++ EA + +M + ++ N + L K ++ A +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
E G+ NV +YN ++ +C+ + A L+ +E +G P++ +Y+ +++G C+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L ++ + + KG N Y +I C+ EA S+M G +PD V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
Y +I K+G+ A K EM +R +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 159/276 (57%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T+ LV LC +A + + M+K+ + PN+++YS+L+D + +V +AK
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F MV+ + D+ +Y+ +INGLC +DEA + + M SK +AD + YN+LI+G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R D KL EM+ RG+ N +TYN L+ ++ VD+A +++ GI P++
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+TY +L+ GLC G L+ A IF+D+ + +L++ TY+ +I G CK G +EA L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G PD VTY ++ L KG + E L +M
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 157/257 (61%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I V T++ L++A K G V EAK +F MV+ ++P+IV+YSSL++G CL
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A +F+ MV +G DV SY +ING CK K V++ L EM + ++++T+ YN+
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + A + ++M+ GI P++ TYN LL LC + +++A+ + + ++++
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ ++ TYT ++ G+CK G++++A +F + +KG ++ TY+ M+ G C +GL E
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 241 ILMSKMESSGCIPDAVT 257
L +KM+ G + + T
Sbjct: 491 ALYTKMKQEGLMKNDCT 507
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 160/276 (57%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ TFNI++ C V A ++ M+K G EP+ V+ SL++G+C V+ A
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + MV+ G D+ +Y II+ LCK K V++A+ E+ K I + + Y +L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C R DA +L+++M + I PNVITY+ LLD K+ V A L +++ I P++
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY+ L++GLC R+ +A ++F ++ KG +V +Y+ +I+G+CK ++ + L +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M G + + VTY +I+ F+ G+ +KA++ +M
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 153/275 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T LV C+ V +A ++ MV+ G +P+IV+Y++++D C K VN A D F +
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI 216
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ +V +YT ++NGLC +A LL++M KKI + I Y++L+D K +
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L EM I P+++TY+ L++ LC +D A + + +G ++ +Y L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G CK R++D ++F+++ +G N TY+ +I G+ + G D+A S+M+ G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD TY I++ L GE EKA + +M R +
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K ++ M G+ ++ +++ +++ +C +V+ A I M+
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D + ++NG C+ V +A SL+++M D + YN++ID LCK +R
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA+ E+ +GI PNV+TY L++ LC S A L+ + ++ I PN+ TY+ L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D K G++ +A+E+F++++ + ++ TYS +I+G C DEA + M S GC+
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D V+Y +I K E KL REM R L
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 120/227 (52%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
++N A D+F+ MV+ + + +++ + K+K D SL +M I D +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+I+ C + A ++ +M G P+ +T L++ C+ + V A++L+ K+ E
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P++ Y ++D LCK R+ DA + F++I KG NV TY+ +++G C + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+S M P+ +TY ++ A K G+ +A++L EMV S+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 163/278 (58%), Gaps = 1/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T+ +L+++LC + ++A+ + M+++GL PN+++Y++L++GYC + A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAV 413
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ M R ++ + ++Y +I G CK V +A +LN+M +K++ D + YNSLIDG
Sbjct: 414 DVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQ 472
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ A++L++ MN RG+ P+ TY ++D LCKS V+ A L +E++G+ PN+
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
YT L+DG CK G++ +A + + +L K N T++ +I G C +G EA +L K
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M G P T I+I L K G+ + A ++M++
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/277 (35%), Positives = 158/277 (57%), Gaps = 1/277 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ T+N +V CK GNV+EA + +V+ GL+P+ +Y+SL+ GYC K+++ A +FN
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +G + +YT +I+GLC + +DEA L +M + Y LI LC E
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R +A LV EM GI PN+ TY L+D LC ++A L+ ++ E+G+ PN+ TY
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L++G CK G ++DA ++ + + + + N RTY+ +I GYCK + +A+ +++KM
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLER 456
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+PD VTY +I + G + A +LL M R L
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 156/272 (57%), Gaps = 1/272 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L+ +L + G V E K V+ M++ + PNI +Y+ +++GYC + V +A + +V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G+ D +YT +I G C+ K +D A+ + NEM K + + Y LI GLC R
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L +M P V TY L+ LC S A+ L+K++EE GI+PN++TYTVL+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LC + + A+E+ +L KG NV TY+ +I+GYCK G+ ++A+ ++ MES
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P+ TY +I+ + K KA +L +M+ R
Sbjct: 426 PNTRTYNELIKG-YCKSNVHKAMGVLNKMLER 456
Score = 160 bits (406), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 148/276 (53%), Gaps = 1/276 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ RT+N L++ CK NV +A V M+++ + P++V+Y+SL+DG C + A
Sbjct: 424 LSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M RG+ D +YT +I+ LCK K V+EA L + + K + + + Y +LIDG
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK + +A ++ +M + PN +T+N L+ LC + A L +K+ + G+QP +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T T+L+ L K G A FQ +L G + TY+ I YC+EG +A +M+K
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M +G PD TY +I+ G+ A +L+ M
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 152/276 (55%), Gaps = 2/276 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V T+N L++ C+ GN A + ++M +GL P+ +Y+S++D C K V +A D+
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F+ + Q+GV +V YT +I+G CK VDEA +L +M SK + +++ +N+LI GLC
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ +A L +M G+ P V T L+ L K D A + +++ G +P+ +T
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT + C+ GRL DA+++ + G + ++ TYS +I GY G + A ++ +M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 248 SSGCIPDAVTYGIIIRALF--KKGENEKAEKLLREM 281
+GC P T+ +I+ L K G+ + +E L M
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 144/274 (52%), Gaps = 1/274 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ L+ LC + EA ++F M P + +Y+ L+ C + ++A ++ M
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ ++ +YT++I+ LC ++A LL +M K ++ + I YN+LI+G CK
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +V M R + PN TYN L+ CKS+ V +A+ ++ K+ E+ + P++ TY L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG C+ G A + + +G + TY+ MID CK +EA L +E G
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
P+ V Y +I K G+ ++A +L +M++++
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ T+ ++ C+EG + +A+++ A M + G+ P++ +YSSL+ GY + + N A D+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKM------------------VDEAWSLLNEMHSK 109
M G ++ +I L ++K D LL +M
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 110 KIIADTICYNSLIDGLCKLERSFDAWKLVNEMN-HRGIPPNVITYNPLLDVLCKSHHVDR 168
+ + Y LI G+C++ A K+ + M + GI P+ + +N LL CK +
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
A ++ + G P + + VL+ GL K G + +FQ++L GY + + ++ID
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
G K+GL + L + ME +GC + TY ++I
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 147/331 (44%), Gaps = 54/331 (16%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ V + L++ CK G V EA + M+ + PN +++++L+ G C ++ +A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ MV+ G+ V + TI+I+ L K D A+S +M S D Y + I
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLL-------------DVLCK--------SH 164
C+ R DA ++ +M G+ P++ TY+ L+ DVL + S
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 165 HV--------------------------------DRAIALIKKIEEQGIQPNMYTYTVLM 192
H D + L++K+ E + PN +Y L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 193 DGLCKVGRLKDAQEIFQDILI-KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
G+C+VG L+ A+++F + +G + + ++ ++ CK +EA ++ M G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+P + ++I L+KKGE E+ + + ++
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 90 LCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPN 149
LC+ DE + E+ K II CYN+L++ L + + ++ EM + PN
Sbjct: 165 LCRKMNKDERF----ELKYKLIIG---CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
+ TYN +++ CK +V+ A + KI E G+ P+ +TYT L+ G C+ L A ++F
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ +KG N Y+ +I G C DEA+ L KM+ C P TY ++I++L
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337
Query: 270 ENEKAEKLLREM 281
+A L++EM
Sbjct: 338 RKSEALNLVKEM 349
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 166/267 (62%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L++ CKEGN +A + A M++ GL P++++Y+SL+ C +N+A + + M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
RG+ + ++YT +++G + ++EA+ +L EM+ + YN+LI+G C +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA ++ +M +G+ P+V++Y+ +L C+S+ VD A+ + +++ E+GI+P+ TY+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ G C+ R K+A ++++++L G + TY+ +I+ YC EG ++AL L ++M G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLL 278
+PD VTY ++I L K+ +A++LL
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 166/286 (58%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + V T+NIL+ C GN+ A +F M +G PN+V+Y++L+DGYC +++
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ + M +G+ ++ SY ++INGLC+ + E +L EM+ + D + YN+
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G CK A + EM G+ P+VITY L+ +CK+ +++RA+ + ++ +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN TYT L+DG + G + +A + +++ G++ +V TY+ +I+G+C G ++A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++ M+ G PD V+Y ++ + + ++A ++ REMV + +
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 157/278 (56%), Gaps = 1/278 (0%)
Query: 10 VRTFNILVEALCK-EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V ++N +++A + + N+ A+NVF M++ + PN+ +Y+ L+ G+C ++ A +F
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M +G +V +Y +I+G CK++ +D+ + LL M K + + I YN +I+GLC+
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R + ++ EMN RG + +TYN L+ CK + +A+ + ++ G+ P++ TY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+ +CK G + A E + ++G N RTY+ ++DG+ ++G +EA ++ +M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G P VTY +I G+ E A +L +M + L
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 155/287 (54%), Gaps = 15/287 (5%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
RT+ LV+ ++G + EA V M G P++V+Y++L++G+C+ ++ A +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M ++G++ DV SY+ +++G C+ VDEA + EM K I DTI Y+SLI G C+ R
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ +A L EM G+PP+ TY L++ C +++A+ L ++ E+G+ P++ TY+V
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSV 560
Query: 191 LMDGLCKVGRLKDAQEI---------------FQDILIKGYNLNVRTYSVMIDGYCKEGL 235
L++GL K R ++A+ + + ++ N+ ++ +I G+C +G+
Sbjct: 561 LINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
EA + M PD Y I+I + G+ KA L +EMV
Sbjct: 621 MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 146/273 (53%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N L++ CK + + + M +GLEPN++SY+ +++G C + + +
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +RG + D +Y +I G CK +A + EM + I Y SLI +CK
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A + +++M RG+ PN TY L+D + +++ A +++++ + G P++ TY
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L++G C G+++DA + +D+ KG + +V +YS ++ G+C+ DEAL + +M
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G PD +TY +I+ ++ ++A L EM+
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 144/280 (51%), Gaps = 15/280 (5%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
V T+N L+ C G +++A V M ++GL P++VSYS+++ G+C +V++A
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ MV++G+ D +Y+ +I G C+ + EA L EM + D Y +LI+
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C A +L NEM +G+ P+V+TY+ L++ L K A L+ K+ + P+
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 186 YTYTVLMD---------------GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
TY L++ G C G + +A ++F+ +L K + + Y++MI G+
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
C+ G +A L +M SG + VT +++AL K+G+
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 121/240 (50%), Gaps = 36/240 (15%)
Query: 83 YTIIINGLCKIKMVDEAWSLLN------------------------------------EM 106
+ +++ ++ ++D+A S+++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
++ + YN LI G C A L ++M +G PNV+TYN L+D CK +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
D L++ + +G++PN+ +Y V+++GLC+ GR+K+ + ++ +GY+L+ TY+ +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 227 IDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
I GYCKEG F +AL++ ++M G P +TY +I ++ K G +A + L +M R L
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 135/272 (49%), Gaps = 15/272 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + I + T++ L++ C++ KEA +++ M++ GL P+ +Y++L++ YC+ +
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN- 119
+ KA + N MV++GV DV +Y+++INGL K EA LL ++ ++ + + Y+
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 120 --------------SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
SLI G C +A ++ M + P+ YN ++ C++
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
+ +A L K++ + G + T L+ L K G++ + + +L V
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
+++ +EG D L ++++M G +P+ ++
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 165/281 (58%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +V T+N ++ +LC G +K+A V M+++ P++++Y+ L++ C V A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M RG T DV +Y +++NG+CK +DEA LN+M S + I +N ++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C R DA KL+ +M +G P+V+T+N L++ LC+ + RAI +++K+ + G QPN
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+Y L+ G CK ++ A E + ++ +G ++ TY+ M+ CK+G ++A+ ++++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ S GC P +TY +I L K G+ KA KLL EM A+ L
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 154/272 (56%), Gaps = 3/272 (1%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L+ C+ G ++A + ++ G P++++Y+ ++ GYC E+N A + + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---S 199
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
V+ DV +Y I+ LC + +A +L+ M + D I Y LI+ C+ A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
KL++EM RG P+V+TYN L++ +CK +D AI + + G QPN+ T+ +++ +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
C GR DA+++ D+L KG++ +V T++++I+ C++GL A+ ++ KM GC P++
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
++Y ++ K+ + ++A + L MV+R +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 157/276 (56%), Gaps = 3/276 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+N+++ CK G E N +V+ + + P++V+Y++++ C ++ +A ++
Sbjct: 171 DVITYNVMISGYCKAG---EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M+QR DV +YTI+I C+ V A LL+EM + D + YN L++G+CK
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R +A K +N+M G PNVIT+N +L +C + A L+ + +G P++ T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+L++ LC+ G L A +I + + G N +Y+ ++ G+CKE D A+ + +M S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
GC PD VTY ++ AL K G+ E A ++L ++ ++
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 144/250 (57%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + V TFNIL+ LC++G + A ++ M + G +PN +SY+ L+ G+C K+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A + MV RG D+ +Y ++ LCK V++A +LN++ SK I YN+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+IDGL K ++ A KL++EM + + P+ ITY+ L+ L + VD AI + E G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+PN T+ +M GLCK + A + ++ +G N +Y+++I+G EG+ EAL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 241 ILMSKMESSG 250
L++++ + G
Sbjct: 575 ELLNELCNKG 584
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 148/276 (53%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+N+LV +CKEG + EA M G +PN+++++ ++ C A+ +
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M+++G + V ++ I+IN LC+ ++ A +L +M +++ YN L+ G CK
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
++ A + + M RG P+++TYN +L LCK V+ A+ ++ ++ +G P + TY
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++DGL K G+ A ++ ++ K + TYS ++ G +EG DEA+ + E
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
G P+AVT+ I+ L K + ++A L M+ R
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR 548
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 155/275 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T NI++ ++C G +A+ + A M+++G P++V+++ L++ C + +A DI M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
Q G + SY +++G CK K +D A L M S+ D + YN+++ LCK +
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +++N+++ +G P +ITYN ++D L K+ +AI L+ ++ + ++P+ TY+ L
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GL + G++ +A + F + G N T++ ++ G CK D A+ + M + GC
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ +Y I+I L +G ++A +LL E+ + L
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 95/181 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+N ++ ALCK+G V++A + + +G P +++Y++++DG +
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
KA + + M + + D +Y+ ++ GL + VDEA +E I + + +NS
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ GLCK ++ A + M +RG PN +Y L++ L A+ L+ ++ +G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 181 I 181
+
Sbjct: 585 L 585
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ LV L +EG V EA F + G+ PN V+++S+M G C ++ ++A D FM
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
+ RG + SYTI+I GL M EA LLNE+ +K ++
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 28/249 (11%)
Query: 45 IVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLN 104
+VS SS +G+CL+++ F+ +RG DV C+ + L
Sbjct: 4 MVSTSSAQEGFCLIQQ-------FHREYKRGNKLDVS---------CRTSGSISSKIPLG 47
Query: 105 EMHSKKIIADTICYNSLIDGLCKLERSFDAWKL-VNEMNHRGIPPNVITYNPLLDVLCKS 163
+++ + GL + F+ + N G +V + L DV +
Sbjct: 48 SRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNN 107
Query: 164 H--------HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
H ++ ++ + G P++ T L+ G C++G+ + A +I + + G
Sbjct: 108 HLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSG 167
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+V TY+VMI GYCK G + AL ++ +M S PD VTY I+R+L G+ ++A
Sbjct: 168 AVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAM 224
Query: 276 KLLREMVAR 284
++L M+ R
Sbjct: 225 EVLDRMLQR 233
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 156/276 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T NIL+ C+ + A + M+K G EP+IV++ SL++G+C V A +F+ M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V G +V Y II+GLCK K VD A LLN M I D + YNSLI GLC R
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA ++V+ M R I P+V T+N L+D K V A +++ + + P++ TY++L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GLC RL +A+E+F ++ KG +V TYS++I+GYCK + + L +M G
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ + VTY I+I+ + G+ AE++ R MV +H
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 153/249 (61%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V TFN L++A KEG V EA+ + M+++ L+P+IV+YS L+ G C+ +++A+
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F FMV +G DV +Y+I+ING CK K V+ L EM + ++ +T+ Y LI G
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ + A ++ M G+ PN+ITYN LL LC + +++A+ ++ +++ G+ ++
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY +++ G+CK G + DA +I+ + +G ++ TY+ M+ G K+GL EA L K
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 246 MESSGCIPD 254
M+ G +P+
Sbjct: 492 MKEDGILPN 500
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 155/276 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V T+N L+ LC G +A + + M K+ + P++ ++++L+D V++A+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + D+ +Y+++I GLC +DEA + M SK D + Y+ LI+G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK ++ KL EM+ RG+ N +TY L+ C++ ++ A + +++ G+ PN+
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY VL+ GLC G+++ A I D+ G + ++ TY+++I G CK G +A +
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G +PD TY ++ L+KKG +A+ L R+M
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 35/303 (11%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ + TF L+ C+ V +A +F MV G +PN+V Y++++DG C K+V+ A D
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID--- 123
+ N M + G+ DV +Y +I+GLC +A +++ M ++I D +N+LID
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 124 --------------------------------GLCKLERSFDAWKLVNEMNHRGIPPNVI 151
GLC R +A ++ M +G P+V+
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY+ L++ CKS V+ + L ++ ++G+ N TYT+L+ G C+ G+L A+EIF+ +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
+ G + N+ TY+V++ G C G ++AL++++ M+ +G D VTY IIIR + K GE
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 272 EKA 274
A
Sbjct: 448 ADA 450
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 146/278 (52%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ F+ L+ A+ K ++ M G+ N+ + + L++ +C +++ A
Sbjct: 80 SIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFL 139
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M++ G + ++ ++NG C+ V +A + ++M + + YN++IDGLCK
Sbjct: 140 GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKS 199
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
++ +A L+N M GI P+V+TYN L+ LC S A ++ + ++ I P+++T+
Sbjct: 200 KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+D K GR+ +A+E +++++ + + ++ TYS++I G C DEA + M S
Sbjct: 260 NALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
GC PD VTY I+I K + E KL EM R +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 119/209 (56%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + +D ++ T+++L+ LC + EA+ +F MV +G P++V+YS L++GYC K+
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +F M QRGV + +YTI+I G C+ ++ A + M + + I YN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ GLC + A ++ +M G+ +++TYN ++ +CK+ V A + + QG
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
+ P+++TYT +M GL K G ++A +F+
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFR 490
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
I F R + Y ++ + +D++ L M + + ++ L+ +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K+++ L +M GIP N+ T N LL+ C+ + A++ + K+ + G +P++
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T+ L++G C+ R+ DA +F ++ GY NV Y+ +IDG CK D AL L+++M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
E G PD VTY +I L G A +++ M R ++
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 113/227 (49%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++ + D+F MVQ + ++ +++ + K+K D L +M I + N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
L++ C+ + A + +M G P+++T+ LL+ C+ V A+ + ++
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +PN+ Y ++DGLCK ++ +A ++ + G +V TY+ +I G C G + +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++S M PD T+ +I A K+G +AE+ EM+ RSL
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+N+L+ LC G +++A + A M K G++ +IV+Y+ ++ G C E
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
V A DI+ + +G+ D+ +YT ++ GL K + EA +L +M I+ + CY
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE-CY 503
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 185 bits (469), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 155/253 (61%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V TF L++A K G + EAK ++ VM++ + P++ +Y SL++G C+ +++A+
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + G + YT +I+G CK K V++ + EM K ++A+TI Y LI G
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + R A ++ N+M+ R PP++ TYN LLD LC + V++A+ + + + ++ + N+
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT+++ G+CK+G+++DA ++F + KG NV TY+ MI G+C+ GL EA L K
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 246 MESSGCIPDAVTY 258
M+ G +P+ Y
Sbjct: 494 MKEDGFLPNESVY 506
Score = 169 bits (429), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 155/272 (56%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N LV LC+ G +A + M+K+ +EPN++++++L+D + V ++ +AK+++N
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+Q V DV +Y +INGLC ++DEA + M + + Y +LI G CK +
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R D K+ EM+ +G+ N ITY L+ C D A + ++ + P++ TY
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
VL+DGLC G+++ A IF+ + + ++N+ TY+++I G CK G ++A L + S
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P+ +TY +I ++G +A+ L ++M
Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 150/282 (53%), Gaps = 2/282 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ TF L+ C +++A +F ++ G +PN+V+Y++L+ C + +N A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKI-KMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
++FN M G +V +Y ++ GLC+I + D AW LL +M ++I + I + +LID
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW-LLRDMMKRRIEPNVITFTALIDA 267
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
K+ + +A +L N M + P+V TY L++ LC +D A + +E G PN
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
YT L+ G CK R++D +IF ++ KG N TY+V+I GYC G D A + +
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+M S PD TY +++ L G+ EKA + M R +
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 148/273 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T NI++ +C A M+K G EP++V+++SL++GYC + A +F+ +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G +V +YT +I LCK + ++ A L N+M + + + YN+L+ GLC++ R
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA L+ +M R I PNVIT+ L+D K + A L + + + P+++TY L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GLC G L +A+++F + G N Y+ +I G+CK ++ + + +M G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+ + +TY ++I+ G + A+++ +M +R
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 144/277 (51%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ L+ LCK ++ A +F M G PN+V+Y++L+ G C + A +
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M++R + +V ++T +I+ K+ + EA L N M + D Y SLI+GLC
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A ++ M G PN + Y L+ CKS V+ + + ++ ++G+ N TYT
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYT 367
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
VL+ G C VGR AQE+F + + ++RTY+V++DG C G ++AL++ M
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ VTY III+ + K G+ E A L + ++ +
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 138/274 (50%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F L+ + K ++F M G+ P + + + +M CL + +A M+
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ ++T ++NG C +++A +L +++ + + Y +LI LCK
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A +L N+M G PNV+TYN L+ LC+ A L++ + ++ I+PN+ T+T L+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D KVG+L +A+E++ ++ +V TY +I+G C GL DEA + ME +GC
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ V Y +I K E K+ EM + +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A ++F MV P+I+ ++ L+ + + +F M G+ + + I++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+ +C A L +M D + + SL++G C R DA L +++ G
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
PNV+TY L+ LCK+ H++ A+ L ++ G +PN+ TY L+ GLC++GR DA +
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+D++ + NV T++ +ID + K G EA L + M PD TYG +I L
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 268 KGENEKAEKLLREM 281
G ++A ++ M
Sbjct: 306 YGLLDEARQMFYLM 319
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
I+ NGL ++ ++A L M + + I + L+ + K+ R L +M
Sbjct: 54 ILRNGLHNLQF-NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
GIPP + T N ++ +C S RA + K+ + G +P++ T+T L++G C R++DA
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+F IL G+ NV TY+ +I CK + A+ L ++M ++G P+ VTY ++
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 265 LFKKGENEKAEKLLREMVARSL 286
L + G A LLR+M+ R +
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRI 254
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ N A D+F MV + +T +++ + K+ D SL +M I N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
++ +C + A + +M G P+++T+ LL+ C + ++ AIAL +I
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +PN+ TYT L+ LCK L A E+F + G NV TY+ ++ G C+ G + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L+ M P+ +T+ +I A K G+ +A++L M+ S++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 158/284 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L I ++ +F IL+ C+ + A +V M+K G EP+IV++ SL+ G+CLV
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + MV+ G +V Y +I+GLCK ++ A LLNEM K + AD + YN+
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ GLC R DA +++ +M R I P+V+T+ L+DV K ++D A L K++ +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN TY +++GLC GRL DA++ F + KG NV TY+ +I G+CK + DE +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
L +M G D TY +I + G+ A + MV+R
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + V +N L++ LCK G + A + M K+GL ++V+Y++L+ G C
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + M++R + DV ++T +I+ K +DEA L EM + + + YNS
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I+GLC R +DA K + M +G PNV+TYN L+ CK VD + L +++ +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIF--------------QDILIKGYNLN------- 219
+++TY L+ G C+VG+L+ A +IF IL+ G +N
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 220 --------------VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ Y++MI G CK ++A L ++ G PDA TY I+I L
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 266 FKKGENEKAEKLLREM 281
K G +A++L+R M
Sbjct: 467 CKNGPRREADELIRRM 482
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 141/252 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ +V TF L++ K+GN+ EA+ ++ M++ ++PN V+Y+S+++G C+
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK F+ M +G +V +Y +I+G CK +MVDE L M + AD YN+
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C++ + A + M R + P++IT+ LL LC + ++ A+ + E
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ Y +++ GLCK +++ A E+F + ++G + RTY++MI G CK G EA
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 241 ILMSKMESSGCI 252
L+ +M+ G I
Sbjct: 477 ELIRRMKEEGII 488
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 35/260 (13%)
Query: 27 KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
++A +F MV P+IV ++ L+ ++ M G++HD+ S+TI+
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
I+ C+ + A S ++ +M G
Sbjct: 113 IHCFCRCSRLSFALS-----------------------------------VLGKMMKLGY 137
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P+++T+ LL C + + A +L+ + + G +PN+ Y L+DGLCK G L A E
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+ ++ KG +V TY+ ++ G C G + +A ++ M PD VT+ +I
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 267 KKGENEKAEKLLREMVARSL 286
K+G ++A++L +EM+ S+
Sbjct: 258 KQGNLDEAQELYKEMIQSSV 277
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 99/191 (51%)
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
++A++L EM + + + + L+ L R +M GI ++ ++ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ C+ + A++++ K+ + G +P++ T+ L+ G C V R+ DA + ++ GY
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
NV Y+ +IDG CK G + AL L+++ME G D VTY ++ L G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 277 LLREMVARSLH 287
+LR+M+ RS++
Sbjct: 233 MLRDMMKRSIN 243
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 161/279 (57%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ ++NI++ LC+ A +V M+K G EP++V+ SSL++G+C V A
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ + M + G DV Y II+G CKI +V++A L + M + AD + YNSL+ GL
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C R DA +L+ +M R I PNVIT+ ++DV K A+ L +++ + + P++
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+TY L++GLC GR+ +A+++ ++ KG +V TY+ +I+G+CK DE L +
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
M G + D +TY II+ F+ G + A+++ M +R
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV++ I V TF +++ KEG EA ++ M ++ ++P++ +Y+SL++G C+
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++AK + + MV +G DV +Y +ING CK K VDE L EM + ++ DTI YN+
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G + R A ++ + M+ R PN+ TY+ LL LC + V++A+ L + +++
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+ ++ TY +++ G+CK+G ++DA ++F+ + KG +V +Y+ MI G+C++ +D++
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 241 ILMSKMESSGCIP 253
+L KM+ G +P
Sbjct: 472 LLYRKMQEDGLLP 484
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 156/276 (56%), Gaps = 3/276 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+ T+N LV LC G +A + MV + + PN++++++++D + + ++A
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ M +R V DV +Y +INGLC VDEA +L+ M +K + D + YN+LI+G
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R + KL EM RG+ + ITYN ++ ++ D A + +++ + PN+
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNI 381
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY++L+ GLC R++ A +F+++ L++ TY+++I G CK G ++A L
Sbjct: 382 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G PD V+Y +I +K + +K++ L R+M
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 147/279 (52%), Gaps = 3/279 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V +N +++ CK G V +A +F M + G+ + V+Y+SL+ G C + A +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
MV R + +V ++T +I+ K EA L EM + + D YNSLI+GLC
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A ++++ M +G P+V+TYN L++ CKS VD L +++ ++G+ + T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y ++ G + GR AQEIF + + N+RTYS+++ G C ++AL+L M+
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S D TY I+I + K G E A L R + + L
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 148/274 (54%), Gaps = 4/274 (1%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
RTF+ ++ N++E ++F M++ P+IV +S ++ K + +F+
Sbjct: 39 RTFSTKRSSM----NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHH 94
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M G+ HD+ SY I+IN LC+ A S++ +M D + +SLI+G C+ R
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
FDA LV++M G P+V+ YN ++D CK V+ A+ L ++E G++ + TY
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ GLC GR DA + +D++++ NV T++ +ID + KEG F EA+ L +M
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
PD TY +I L G ++A+++L MV +
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 86/150 (57%)
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
L + M GI ++ +YN +++ LC+ A++++ K+ + G +P++ T + L++G C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 197 KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAV 256
+ R+ DA ++ + G+ +V Y+ +IDG CK GL ++A+ L +ME G DAV
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 257 TYGIIIRALFKKGENEKAEKLLREMVARSL 286
TY ++ L G A +L+R+MV R +
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 163/273 (59%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V +F IL++ C+ G ++++ ++ + + G PN+V Y++L+DG C E+ KAKD+F
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + G+ + ++YT++INGL K + + + + +M + + YN +++ LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R+ DA+++ +EM RG+ N++TYN L+ LC+ ++ A ++ +++ GI PN+ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+DG C VG+L A + +D+ +G + ++ TY++++ G+C++G A ++ +ME
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P VTY I+I + EKA +L M
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 163/271 (60%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N ++ LCK+G K+A VF M ++G+ NIV+Y++L+ G C ++N+A + + M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ ++ +Y +I+G C + + +A SL ++ S+ + + YN L+ G C+ +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A K+V EM RGI P+ +TY L+D +S ++++AI L +EE G+ P+++TY+VL
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ G C G++ +A +F+ ++ K N Y+ MI GYCKEG AL L+ +ME
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
P+ +Y +I L K+ ++++AE+L+ +M+
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 157/279 (56%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A RT+ +L+ L K G K+ ++ M + G+ PN+ +Y+ +M+ C A +
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F+ M +RGV+ ++ +Y +I GLC+ ++EA ++++M S I + I YN+LIDG C
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCG 350
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ + A L ++ RG+ P+++TYN L+ C+ A ++K++EE+GI+P+ T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT+L+D + ++ A ++ + G +V TYSV+I G+C +G +EA L M
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
C P+ V Y +I K+G + +A KLL+EM + L
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 132/243 (54%)
Query: 44 NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
++ S+ L+ G C E+ K+ D+ + + G + +V YT +I+G CK +++A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 104 NEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS 163
EM ++A+ Y LI+GL K +++ +M G+ PN+ TYN +++ LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 164 HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
A + ++ E+G+ N+ TY L+ GLC+ +L +A ++ + G N N+ TY
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 224 SVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ +IDG+C G +AL L ++S G P VTY I++ +KG+ A K+++EM
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 284 RSL 286
R +
Sbjct: 402 RGI 404
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ R + +++ + + ++ + + F MV G P ++ L+ N+
Sbjct: 92 TKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF 151
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
FN + V DV S+ I+I G C+ +++++ LL E+ + + Y +LIDG CK
Sbjct: 152 FNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A L EM G+ N TY L++ L K+ + + +K++E G+ PN+YT
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +M+ LCK GR KDA ++F ++ +G + N+ TY+ +I G C+E +EA ++ +M+
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S G P+ +TY +I G+ KA L R++ +R L
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 130/259 (50%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ + T+N L+ LC+E + EA V M G+ PN+++Y++L+DG+C V ++ KA
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + RG++ + +Y I+++G C+ A ++ EM + I + Y LID
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ + A +L M G+ P+V TY+ L+ C ++ A L K + E+ +PN
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y ++ G CK G A ++ +++ K NV +Y MI+ CKE EA L+ K
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 246 MESSGCIPDAVTYGIIIRA 264
M SG P +I RA
Sbjct: 539 MIDSGIDPSTSILSLISRA 557
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 159/280 (56%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ ++ T N L+ C + +A + MV+ G +P+ V++++L+ G L + ++A
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + MVQRG D+ +Y ++NGLCK D A +LLN+M + KI A+ + Y+++ID LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K DA L EM ++G+ PNVITY+ L+ LC A L+ + E+ I PN+
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T++ L+D K G+L A++++++++ + + N+ TYS +I+G+C EA ++ M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
C+P+ VTY +I K +K +L REM R L
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 154/265 (58%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+A V ++ ++++LCK + +A N+F M +G+ PN+++YSSL+ C + A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M++R + ++ +++ +I+ K + +A L EM + I + Y+SLI+G
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C L+R +A +++ M + PNV+TYN L++ CK+ VD+ + L +++ ++G+ N
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G + +AQ +F+ ++ G + N+ TY++++DG CK G +A+++
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Query: 246 MESSGCIPDAVTYGIIIRALFKKGE 270
++ S PD TY I+I + K G+
Sbjct: 489 LQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 129/202 (63%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ + TF+ L++A K+G + +A+ ++ M+K+ ++PNI +YSSL++G+C++
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +AK + M+++ +V +Y +ING CK K VD+ L EM + ++ +T+ Y +
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + +A + +M G+ PN++TYN LLD LCK+ + +A+ + + ++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 181 IQPNMYTYTVLMDGLCKVGRLK 202
++P++YTY ++++G+CK G+ K
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKWK 515
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 146/274 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+ +V LCK G+ A N+ M +E N+V YS+++D C +
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A ++F M +GV +V +Y+ +I+ LC +A LL++M +KI + + +++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + A KL EM R I PN+ TY+ L++ C + A +++ + +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY L++G CK R+ E+F+++ +G N TY+ +I G+ + D A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M S G P+ +TY I++ L K G+ KA
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 135/247 (54%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
G+ N+ +Y+ L++ +C ++ A + M++ G D+ + ++NG C + +A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
+L+++M DT+ + +LI GL ++ +A L++ M RG P+++TY +++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
LCK D A+ L+ K+E I+ N+ Y+ ++D LCK DA +F ++ KG N
Sbjct: 228 LCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 287
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
V TYS +I C G + +A L+S M P+ VT+ +I A KKG+ KAEKL
Sbjct: 288 VITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE 347
Query: 280 EMVARSL 286
EM+ RS+
Sbjct: 348 EMIKRSI 354
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF---MVQRGVTHDVQSYT 84
+A +F VM + P+I+ +S L+ + ++NK + +F M G++H++ +Y
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSA---IAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
I+IN C+ + A +LL +M D + NSL++G C R DA LV++M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
G P+ +T+ L+ L + A+ALI ++ ++G QP++ TY +++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+ + NV YS +ID CK D+AL L ++ME+ G P+ +TY +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 265 LFKKGENEKAEKLLREMVARSLH 287
L G A +LL +M+ R ++
Sbjct: 298 LCNYGRWSDASRLLSDMIERKIN 320
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 111/222 (50%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
E++ A +F M Q + ++ +++ + K+ D S +M I + YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+ C+ R A L+ +M G P+++T N LL+ C + + A+AL+ ++ E
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P+ T+T L+ GL + +A + ++ +G ++ TY +++G CK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L L++KME++ + V Y +I +L K + A L EM
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 68 FNFMVQRGVTHDVQSY---TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
F+F +R + SY ++ GL I++ D+A L M + I ++ L+
Sbjct: 30 FSFCRRRAFSGKT-SYDYREVLRTGLSDIEL-DDAIGLFGVMAQSRPFPSIIEFSKLLSA 87
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
+ K+ + +M GI N+ TYN L++ C+ + A+AL+ K+ + G +P+
Sbjct: 88 IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 147
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ T L++G C R+ DA + ++ GY + T++ +I G EA+ L+
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+M GC PD VTYG ++ L K+G+ + A LL +M A
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 246
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 155/263 (58%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ID V F L++ KEGN+ EA+N++ M+++ + PN+ +Y+SL++G+C+
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK +F+ MV +G DV +Y +I G CK K V++ L EM + ++ D YN+
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C+ + A K+ N M G+ P+++TYN LLD LC + +++A+ +++ +++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ ++ TY +++ GLC+ +LK+A +F+ + KG + Y MI G C++GL EA
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 241 ILMSKMESSGCIPDAVTYGIIIR 263
L +M+ G +P Y +R
Sbjct: 485 KLCRRMKEDGFMPSERIYDETLR 507
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 157/278 (56%), Gaps = 4/278 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN--K 63
I A+ T+N L+ L G +A + MVK+ ++PN++ +++L+D + VKE N +
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF--VKEGNLLE 272
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A++++ M++R V +V +Y +ING C + +A + + M SK D + YN+LI
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G CK +R D KL EM ++G+ + TYN L+ C++ ++ A + ++ + G+ P
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
++ TY +L+D LC G+++ A + +D+ ++++ TY+++I G C+ EA L
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G PDA+ Y +I L +KG +A+KL R M
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 147/277 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ +F IL+ C+ + A + M+K G P+IV+ SL++G+C +A
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 169
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M G +V Y +INGLCK + ++ A + M K I AD + YN+LI GL
Sbjct: 170 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 229
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
R DA +L+ +M R I PNVI + L+D K ++ A L K++ + + PN+
Sbjct: 230 SNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNV 289
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+TY L++G C G L DA+ +F ++ KG +V TY+ +I G+CK ++ + L +
Sbjct: 290 FTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M G + DA TY +I + G+ A+K+ MV
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 138/263 (52%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T L+ C+ +EA ++ M G PN+V Y+++++G C +++N A ++F M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ D +Y +I+GL +A LL +M +KI + I + +LID K
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A L EM R + PNV TYN L++ C + A + + +G P++ TY L
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ G CK R++D ++F ++ +G + TY+ +I GYC+ G + A + ++M G
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 252 IPDAVTYGIIIRALFKKGENEKA 274
PD VTY I++ L G+ EKA
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKA 413
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 149/274 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N ++ LCK ++ A VF M K+G+ + V+Y++L+ G A + MV
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R + +V +T +I+ K + EA +L EM + ++ + YNSLI+G C
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA + + M +G P+V+TYN L+ CKS V+ + L ++ QG+ + +TY L+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G C+ G+L AQ++F ++ G + ++ TY++++D C G ++AL+++ ++ S
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D +TY III+ L + + ++A L R + + +
Sbjct: 427 VDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 128/251 (50%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
M G+ ++ S++ L+ +C ++ A + M++ G + + ++NG C+
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
EA SL++ M + + + YN++I+GLCK +A ++ M +GI + +TYN
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
L+ L S A L++ + ++ I PN+ +T L+D K G L +A+ ++++++ +
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
NV TY+ +I+G+C G +A + M S GC PD VTY +I K E
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 276 KLLREMVARSL 286
KL EM + L
Sbjct: 345 KLFCEMTYQGL 355
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 108/227 (47%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ + A +F M+Q + +T ++ + K+ D L ++M + I D +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI C+ R A L+ +M G P+++T LL+ C+ + A++L+ ++
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G PN+ Y +++GLCK L +A E+F + KG + TY+ +I G G + +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ M P+ + + +I K+G +A L +EM+ RS+
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 1/212 (0%)
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G +H + N L IK D+A+SL EM + I + + ++ + K+ +
Sbjct: 40 GASHHHHYRERLRNELHCIKF-DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIV 98
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L ++M + GI ++ ++ L+ C+ + A+AL+ K+ + G +P++ T L++G
Sbjct: 99 IYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG 158
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
C+ R ++A + + G+ NV Y+ +I+G CK + AL + ME G D
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
AVTY +I L G A +LLR+MV R +
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 167/281 (59%), Gaps = 3/281 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ V TFN L++A KEG + EA+ + M+++ ++P+ ++Y+ L++G+C+
Sbjct: 319 MLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR 378
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK +F FMV + ++Q+Y +ING CK K V++ L EM + ++ +T+ Y +
Sbjct: 379 LDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G + A + +M +P +++TY+ LL LC +D A+ + K +++
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ N++ Y +++G+CK G++ +A ++F + IK +V TY+ MI G C + L EA
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEAD 555
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L KM+ G +P++ TY +IRA + + + +L++EM
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I ++ T++I + C+ + A V A M+K G EP+IV+ SSL++GYC K ++ A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 65 ------------KDIFNF----------------------MVQRGVTHDVQSYTIIINGL 90
D F F MVQRG D+ +Y ++NGL
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK +D A +LLN+M + +I A+ + +N++ID LCK A L EM +GI PNV
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+TYN L++ LC A L+ + E+ I PN+ T+ L+D K G+L +A+++ ++
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ + + + TY+++I+G+C DEA + M S C+P+ TY +I K
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413
Query: 271 NEKAEKLLREMVARSL 286
E +L REM R L
Sbjct: 414 VEDGVELFREMSQRGL 429
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 148/274 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+ +V LCK G++ A N+ M ++ N+V +++++D C +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V A D+F M +G+ +V +Y +IN LC +A LL+ M KKI + + +N+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID K + +A KL EM R I P+ ITYN L++ C + +D A + K + +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY L++G CK R++D E+F+++ +G N TY+ +I G+ + G D A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M S+ D +TY I++ L G+ + A
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 152/274 (55%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A+ K + ++ M G+ ++ +YS ++ +C +++ A + M+
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ + + ++NG C K + +A +L+++M DT + +LI GL ++
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV++M RG P+++TY +++ LCK +D A+ L+ K+E I+ N+ + ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LCK ++ A ++F ++ KG NV TY+ +I+ C G + +A L+S M
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ VT+ +I A FK+G+ +AEKL EM+ RS+
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 29 AKNVFAVMVKQGL--EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
AK +F QG+ P + S+ +L C + A + I+
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYR--------------EIL 54
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
N L I VD+A L +M + + +N L+ + K+ + L +M GI
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
++ TY+ ++ C+ + A+A++ K+ + G +P++ T + L++G C R+ DA
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+ ++ GY + T++ +I G EA+ L+ +M GC PD VTYG ++ L
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 267 KKGENEKAEKLLREMVA 283
K+G+ + A LL +M A
Sbjct: 235 KRGDIDLALNLLNKMEA 251
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 116/228 (50%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+V+ A D+F MV+ + + +++ + K+ + SL +M + I D Y+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
I+ C+ + A ++ +M G P+++T + LL+ C S + A+AL+ ++ E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +P+ +T+T L+ GL + +A + ++ +G ++ TY +++G CK G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L L++KME++ + V + II +L K E A L EM + +
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 8/192 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +++ + G+ A+ VF MV + +I++YS L+ G C +++ A IF ++
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ + ++ Y +I G+CK V EAW L + K D + YN++I GLC
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLL 551
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA--LIKKIEEQGIQPNMYTYT 189
+A L +M G PN TYN L + DRA + LIK++ G + T +
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTL--IRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 190 VLMDGLCKVGRL 201
L+ + GRL
Sbjct: 610 -LVTNMLHDGRL 620
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 157/306 (51%), Gaps = 28/306 (9%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+ I + T+N ++ LC+ G EA + MVK G+ P+ VSY++L+DG+C V +
Sbjct: 155 RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVR 214
Query: 64 AK----------------------------DIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
AK + + MV G DV +++ IIN LCK
Sbjct: 215 AKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGK 274
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
V E LL EM + + + Y +L+D L K A L ++M RGIP +++ Y
Sbjct: 275 VLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTV 334
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
L+D L K+ + A K + E PN+ TYT L+DGLCK G L A+ I +L K
Sbjct: 335 LMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
NV TYS MI+GY K+G+ +EA+ L+ KME +P+ TYG +I LFK G+ E A
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 276 KLLREM 281
+L +EM
Sbjct: 455 ELSKEM 460
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 148/286 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV+ D +V TF+ ++ LCK G V E + M + + PN V+Y++L+D
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
A +++ MV RG+ D+ YT++++GL K + EA + + + + Y +
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+DGLCK A ++ +M + + PNV+TY+ +++ K ++ A++L++K+E+Q
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN +TY ++DGL K G+ + A E+ +++ + G N +++ + G E
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ M S G D + Y +I FK G+ E A EM R +
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 172/322 (53%), Gaps = 36/322 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV++ I ++ + +L++ L K G+++EA+ F ++++ PN+V+Y++L+DG C +
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A+ I M+++ V +V +Y+ +ING K M++EA SLL +M + ++ + Y +
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 121 LIDGLCKLERSFDAWKLVNEM----------------NH-------------------RG 145
+IDGL K + A +L EM NH +G
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ + I Y L+DV K + A+A ++++E+G+ ++ +Y VL+ G+ K G++ A
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GAD 558
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
++ + KG ++ T+++M++ K+G + L L KM+S G P ++ I++ L
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGML 618
Query: 266 FKKGENEKAEKLLREMVARSLH 287
+ G+ E+A +L +M+ +H
Sbjct: 619 CENGKMEEAIHILNQMMLMEIH 640
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 150/271 (55%), Gaps = 2/271 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ LV++L K + A +++ MV +G+ ++V Y+ LMDG ++ +A+ F +
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++ +V +YT +++GLCK + A ++ +M K +I + + Y+S+I+G K
Sbjct: 356 LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGML 415
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A L+ +M + + PN TY ++D L K+ + AI L K++ G++ N Y L
Sbjct: 416 EEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ L ++GR+K+ + + +D++ KG L+ Y+ +ID + K G + AL +M+ G
Sbjct: 476 VNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535
Query: 252 IPDAVTYGIIIRALFKKGE--NEKAEKLLRE 280
D V+Y ++I + K G+ + A K +RE
Sbjct: 536 PWDVVSYNVLISGMLKFGKVGADWAYKGMRE 566
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 142/281 (50%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ ++ TFNI++ + K+G+ + ++ M G++P+++S + ++ C ++ +A
Sbjct: 569 IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I N M+ + ++ +Y I ++ K K D + + S I YN+LI L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CKL + A ++ +M RG P+ +T+N L+ HV +A++ + E GI PN+
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY ++ GL G +K+ + ++ +G + TY+ +I G K G ++ + +
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 808
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M + G +P TY ++I G+ +A +LL+EM R +
Sbjct: 809 MIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 26/272 (9%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ +N L+ LCK G K+A V M +G P+ V+++SLM GY + V KA ++
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M++ G++ +V +Y II GL ++ E L+EM S+ + D YN+LI G K+
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ + EM G+ P TYN L+ + +A L+K++ ++G+ PN TY
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF-DEALILMSKM-ES 248
++ GLCK+ D + + K+ ++ EA L+ +M E
Sbjct: 859 MISGLCKLCTHPDVE------------------------WNKKAMYLAEAKGLLKEMVEE 894
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
G IP T I A K G AE+ L+E
Sbjct: 895 KGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 134/309 (43%), Gaps = 34/309 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ LV L + G +KE K + MV +G+ + ++Y+SL+D + + A M
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWS------------------------------- 101
+RG+ DV SY ++I+G+ K V W+
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 102 ---LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
L ++M S I + N ++ LC+ + +A ++N+M I PN+ TY LD
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
K D + + GI+ + Y L+ LCK+G K A + D+ +G+
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+ T++ ++ GY +AL S M +G P+ TY IIR L G ++ +K L
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 279 REMVARSLH 287
EM +R +
Sbjct: 772 SEMKSRGMR 780
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 20/276 (7%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVS---------YSSLMDGYCLVKEVNKAKDIFNFMV 72
K + E++ + ++ +P++ + +L Y + + A + M
Sbjct: 26 KRPQIPESEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMC 85
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLL-NEMHSKKIIADTICYNSLIDGLCKLERS 131
GV D + + +I+ +V + SL+ ++M + + D N LI CK+ R
Sbjct: 86 TFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRL 145
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L + +R I + +TYN ++ LC+ D A + ++ + GI P+ +Y L
Sbjct: 146 SFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 202
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CKVG A+ + +I LN+ T+++++ Y +EA M SG
Sbjct: 203 IDGFCKVGNFVRAKALVDEI----SELNLITHTILLSSYYNLHAIEEAY---RDMVMSGF 255
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
PD VT+ II L K G+ + LLREM S++
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I V T+N ++ L G +KE + M +G+ P+ +Y++L+ G +
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ + I+ M+ G+ +Y ++I+ + + +A LL EM + + +T Y +
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 LIDGLCKL 128
+I GLCKL
Sbjct: 859 MISGLCKL 866
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 158/260 (60%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++ ILV+ CK G + EA NV M GL+PN V ++ L+ +C + +A +IF
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++G DV ++ +I+GLC++ + A LL +M S+ ++A+T+ YN+LI+ +
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A KLVNEM +G P + ITYN L+ LC++ VD+A +L +K+ G P+ +
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L++GLC+ G +++A E ++++++G ++ T++ +I+G C+ G ++ L + K+++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 250 GCIPDAVTYGIIIRALFKKG 269
G PD VT+ ++ L K G
Sbjct: 664 GIPPDTVTFNTLMSWLCKGG 683
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 157/279 (56%), Gaps = 1/279 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKD 66
E+ FN L+ G + +AK V + MV G+ P++ +Y+SL+ GY V A +
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + M +G +V SYTI+++G CK+ +DEA+++LNEM + + +T+ +N LI C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K R +A ++ EM +G P+V T+N L+ LC+ + A+ L++ + +G+ N
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY L++ + G +K+A+++ +++ +G L+ TY+ +I G C+ G D+A L KM
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G P ++ I+I L + G E+A + +EMV R
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 147/281 (52%), Gaps = 5/281 (1%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ +++N+++E L K A NVF M+ + + P + ++ +M +C V E++ A
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M + G + Y +I+ L K V+EA LL EM + D +N +I GLC
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K +R +A K+VN M RG P+ ITY L++ LCK VD A L +I +P +
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIV 354
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIK-GYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ L+ G GRL DA+ + D++ G +V TY+ +I GY KEGL AL ++
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M + GC P+ +Y I++ K G+ ++A +L EM A L
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL 455
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 142/256 (55%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN L+ A CKE + EA +F M ++G +P++ +++SL+ G C V E+ A + M+
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
GV + +Y +IN + + EA L+NEM + D I YNSLI GLC+
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A L +M G P+ I+ N L++ LC+S V+ A+ K++ +G P++ T+ L+
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+GLC+ GR++D +F+ + +G + T++ ++ CK G +A +L+ + G +
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 253 PDAVTYGIIIRALFKK 268
P+ T+ I+++++ +
Sbjct: 702 PNHRTWSILLQSIIPQ 717
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 144/275 (52%), Gaps = 5/275 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ L+ +L K V EA + M G P+ +++ ++ G C +N+A + N M+
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
RG D +Y ++NGLCKI VD A L + +I+ +N+LI G R
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLD 370
Query: 133 DAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA ++++M GI P+V TYN L+ K V A+ ++ + +G +PN+Y+YT+L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK+G++ +A + ++ G N ++ +I +CKE EA+ + +M GC
Sbjct: 431 VDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC 490
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD T+ +I L + E + A LLR+M++ +
Sbjct: 491 KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 126/231 (54%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V TFN L+ LC+ +K A + M+ +G+ N V+Y++L++ + E+ +A+ +
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
N MV +G D +Y +I GLC+ VD+A SL +M I N LI+GLC+
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+A + EM RG P+++T+N L++ LC++ ++ + + +K++ +GI P+ T
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ LM LCK G + DA + + + G+ N RT+S+++ + D
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + A T+N L+ A + G +KEA+ + MV QG + ++Y+SL+ G C E
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+KA+ +F M++ G S I+INGLC+ MV+EA EM + D + +NS
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+GLC+ R D + ++ GIPP+ +T+N L+ LCK V A L+ + E G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 181 IQPNMYTYTVLMDGL 195
PN T+++L+ +
Sbjct: 700 FVPNHRTWSILLQSI 714
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 95/168 (56%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV Q + T+N L++ LC+ G V +A+++F M++ G P+ +S + L++G C
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A + MV RG T D+ ++ +INGLC+ +++ ++ ++ ++ I DT+ +N+
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNT 674
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
L+ LCK +DA L++E G PN T++ LL + +DR
Sbjct: 675 LMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 8/231 (3%)
Query: 61 VNKAKDIFNFM-VQRGVTHDVQSYTIIINGLC---KIKMVDEAWSLLNEMHSKKIIADTI 116
V+ + ++F++ Q G H Y ++I L + K +D LL +M + I+
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDR---LLIQMKDEGIVFKES 147
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
+ S++ K +L+ EM N P +YN +L++L + A +
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+ + I P ++T+ V+M C V + A + +D+ G N Y +I K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+EAL L+ +M GC+PDA T+ +I L K +A K++ M+ R
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 163/287 (56%), Gaps = 1/287 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVK 59
MV V T L++ LCK G ++A +F +V+ +PN+ +Y+S++ GYC
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
++N+A+ +F+ M ++G+ +V +YT +ING CK A+ L+N M + + + YN
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+ ID LCK R+ +A++L+N+ G+ + +TY L+ CK + +++A+A ++ +
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G + +M +L+ C+ ++K+++ +FQ ++ G TY+ MI YCKEG D A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L M+ GC+PD+ TYG +I L KK ++A KL M+ R L
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL 599
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 35/273 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ ++ CKE + A+ +F+ M +QGL PN+ +Y++L++G+C +A ++ N
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY----------- 118
M G ++ +Y I+ LCK EA+ LLN+ S + AD + Y
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 119 ------------------------NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
N LI C+ ++ ++ +L + G+ P TY
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
++ CK +D A+ ++ G P+ +TY L+ GLCK + +A ++++ ++ +
Sbjct: 538 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
G + T + YCK A+IL+ ++
Sbjct: 598 GLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 140/278 (50%), Gaps = 16/278 (5%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+R + + ++L GN+++A V M++ E + +N+A +
Sbjct: 127 MRLYLVTADSLLANGNLQKAHEVMRCMLRNFSE---------------IGRLNEAVGMVM 171
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +G+T + ++ ++ +++ A ++ +EM + ++ D+ Y ++ G +
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A + + M RG P+ T +L LC++ V+RAI +K+ + G +PN+ +T
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+DGLCK G +K A E+ ++++ G+ NV T++ +IDG CK G ++A L K+ S
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 250 GCI-PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ TY +I K+ + +AE L M + L
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ T+N +++LCK+ EA + GLE + V+Y+ L+ C ++N+A F
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G D++ I+I C+ K + E+ L + S +I Y S+I CK E
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK-E 546
Query: 130 RSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
D A K + M G P+ TY L+ LCK VD A L + + ++G+ P T
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L CK +A + + + K L +RT ++ C E A + K+
Sbjct: 607 VTLAYEYCKRNDSANAMILLEPLDKK---LWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 663
Query: 249 SGCIPDAVTYGIIIRALFKKGEN 271
D VT A + G+N
Sbjct: 664 KDSSADRVTLAAFTTACSESGKN 686
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 3/209 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++A+ T+ IL++ CK+ ++ +A F M K G E ++ + L+ +C K++ +++
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F +V G+ ++YT +I+ CK +D A + M + D+ Y SLI GL
Sbjct: 519 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +A KL M RG+ P +T L CK + A+ L++ ++++ +
Sbjct: 579 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---I 635
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
T L+ LC ++ A FQ +L K
Sbjct: 636 RTVRTLVRKLCSEKKVGVAALFFQKLLEK 664
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 174 bits (441), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 171/282 (60%), Gaps = 1/282 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I +V T+N L+ LC G +A + + M+++ + P++V +++L+D + +
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 VNKAKDIFNFMVQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ +A+ +++ MV+ + DV +Y +I G CK K V+E + EM + ++ +T+ Y
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+LI G + +A + +M G+ P+++TYN LLD LC + +V+ A+ + + ++++
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
++ ++ TYT +++ LCK G+++D ++F + +KG NV TY+ M+ G+C++GL +EA
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L +M+ G +P++ TY +IRA + G+ + +L++EM
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 155/277 (55%), Gaps = 1/277 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N L+ C + EA + MV+ G +P+ V++++L+ G + ++A + M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V +G D+ +Y +INGLCK D A +LLN+M KI AD + YN++IDGLCK +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA+ L N+M +GI P+V TYNPL+ LC A L+ + E+ I P++ + L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNL-NVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+D K G+L +A++++ +++ + +V Y+ +I G+CK +E + + +M G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ + VTY +I F+ + + A+ + ++MV+ +H
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 153/282 (54%), Gaps = 1/282 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T++I + C+ + A + M+K G P+IV+ +SL++G+C +++A
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + MV+ G D ++T +++GL + EA +L+ M K D + Y ++I+GL
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK A L+N+M I +V+ YN ++D LCK H+D A L K+E +GI+P++
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+TY L+ LC GR DA + D+L K N ++ ++ +ID + KEG EA L +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 246 M-ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M +S C PD V Y +I+ K E+ ++ REM R L
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 146/266 (54%), Gaps = 1/266 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVK-QGLEPNIVSYSSLMDGYCLVK 59
M+ + I+ ++ FN L++A KEG + EA+ ++ MVK + P++V+Y++L+ G+C K
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
V + ++F M QRG+ + +YT +I+G + + D A + +M S + D + YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
L+DGLC A + M R + +++TY +++ LCK+ V+ L + +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G++PN+ TYT +M G C+ G ++A +F ++ G N TY+ +I ++G +
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAAS 550
Query: 240 LILMSKMESSGCIPDAVTYGIIIRAL 265
L+ +M S G DA T+G++ L
Sbjct: 551 AELIKEMRSCGFAGDASTFGLVTNML 576
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 135/262 (51%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ +A +F MVK P+IV +S L+ + + + + M G++H++ +Y+I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
IN C+ + A ++L +M + NSL++G C R +A LV++M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ +T+ L+ L + + A+AL++++ +G QP++ TY +++GLCK G A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + +V Y+ +IDG CK D+A L +KME+ G PD TY +I L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 266 FKKGENEKAEKLLREMVARSLH 287
G A +LL +M+ ++++
Sbjct: 296 CNYGRWSDASRLLSDMLEKNIN 317
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 145/275 (52%), Gaps = 1/275 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ L+ A+ K ++ M G+ N+ +YS ++ +C +++ A I M+
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + ++NG C + EA +L+++M DT+ + +L+ GL + ++
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A LV M +G P+++TY +++ LCK D A+ L+ K+E+ I+ ++ Y ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGLCK + DA ++F + KG +V TY+ +I C G + +A L+S M
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
PD V + +I A K+G+ +AEKL EMV +S H
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMV-KSKH 351
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 165/284 (58%), Gaps = 4/284 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLV-- 58
M+ + I V TFN+++ ALCK G + +A++V M G PN+VSY++L+DGYC +
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 59 -KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
++ KA + MV+ V+ ++ ++ I+I+G K + + + EM + + + I
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
YNSLI+GLC + +A + ++M G+ PN+ITYN L++ CK+ + A+ + ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
QG P Y +L+D CK+G++ D + +++ +G +V TY+ +I G C+ G +
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
A L ++ S G +PD VT+ I++ +KGE+ KA LL+EM
Sbjct: 454 AAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 163/287 (56%), Gaps = 2/287 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + TFNIL++ K+ N+ + VF M+ Q ++PN++SY+SL++G C +
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A + + MV GV ++ +Y +ING CK M+ EA + + + + T YN
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID CKL + D + L EM GI P+V TYN L+ LC++ +++ A L ++ +G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P++ T+ +LM+G C+ G + A + +++ G TY++++ GYCKEG A
Sbjct: 467 L-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 241 ILMSKMESSGCIP-DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ ++ME + + +Y ++++ +KG+ E A LL EM+ + L
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 155/275 (56%), Gaps = 5/275 (1%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L+ AL KE + + V+ M+++ ++PN+ +++ +++ C ++NKA+D+ M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 76 VTHDVQSYTIIINGLCKI----KMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ +V SY +I+G CK+ KM +A ++L EM + + +N LIDG K +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ K+ EM + + PNVI+YN L++ LC + AI++ K+ G+QPN+ TY L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G CK LK+A ++F + +G R Y+++ID YCK G D+ L +ME G
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+PD TY +I L + G E A+KL ++ ++ L
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 126/294 (42%), Gaps = 79/294 (26%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q + V ++N L+ LC G + EA ++ MV G++PN+++Y++L++G+C
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A D+F + +G + Y ++I+ CK+ +D+ ++L EM + I+ D YN
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 121 LIDGLCK------LERSFD----------------------------AWKLVNEMNHRGI 146
LI GLC+ ++ FD A L+ EM+ G+
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIE----------------------------- 177
P +TYN ++ CK ++ A + ++E
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 178 -------EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
E+G+ PN TY ++ + + G + D I+G+ NV T S
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD---------IEGHLFNVSTKS 606
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 112 IADTICYNSLIDGL--------CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS 163
+ D +C NS+I + + E F+A+K + G + ++ PL+ L K
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFK---RSGYYGYKLSALSCKPLMIALLKE 201
Query: 164 HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
+ + K++ + IQPN++T+ V+++ LCK G++ A+++ +D+ + G + NV +Y
Sbjct: 202 NRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSY 261
Query: 224 SVMIDGYCK---EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+ +IDGYCK G +A ++ +M + P+ T+ I+I +K + K+ +E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321
Query: 281 MV 282
M+
Sbjct: 322 ML 323
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 156/282 (55%), Gaps = 9/282 (3%)
Query: 10 VRTFNILVEALCK-EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V + N+L++ALC+ +G V +F M K+G +P+ +Y +L+ G C +++AK +F
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
MV++ V +YT +INGLC K VDEA L EM SK I + Y+SL+DGLCK
Sbjct: 216 TEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
RS A +L M RG PN++TY L+ LCK + A+ L+ ++ QG++P+ Y
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG-------YNLNVRTYSVMIDGYCKEGLFDEALI 241
++ G C + + ++A ++++ G +N++V+T + ++ G C A
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFT 394
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
L M S G + T +++ L KKGE +KA +L+ E+V
Sbjct: 395 LYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 148/283 (52%), Gaps = 9/283 (3%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + T+ L+ LC+ G + EAK +F MV++ P +V+Y+SL++G C K V++A
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
M +G+ +V +Y+ +++GLCK +A L M ++ + + Y +LI GLC
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K ++ +A +L++ MN +G+ P+ Y ++ C A + ++ GI PN
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 187 TYTV-------LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
T+ + ++ GLC A ++ + +G ++ V T ++ CK+G F +A
Sbjct: 369 TWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKA 427
Query: 240 LILMSKMESSGCIPDAVTYGIII-RALFKKGENEKAEKLLREM 281
+ L+ ++ + GCIP T+ ++I L K E ++ LLR++
Sbjct: 428 VQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMD---GYCLVKEVNKAKDIF 68
+F +V L K A+++ +V+ +E +VS L+ GY V + +F
Sbjct: 53 SFGYMVLRLVSANKFKAAEDL---IVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M ++Y ++ L + ++ A+ M + N LI LC+
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 129 ERSFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ + DA K+ EM RG P+ TY L+ LC+ +D A L ++ E+ P + T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT L++GLC + +A +++ KG NV TYS ++DG CK+G +A+ L M
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ GC P+ VTY +I L K+ + ++A +LL M + L
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V T++ L++ LCK+G +A +F +M+ +G PN+V+Y++L+ G C +++ +A
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY------- 118
++ + M +G+ D Y +I+G C I EA + L+EM I + + +
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N ++ GLC S A+ L M RGI V T L+ LCK +A+ L+ +I
Sbjct: 378 NEVVRGLCANYPS-RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVT 436
Query: 179 QGIQPNMYTYTVLM 192
G P+ T+ +L+
Sbjct: 437 DGCIPSKGTWKLLI 450
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 162/281 (57%), Gaps = 4/281 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ +V TFN L+ A KEG + EA+ + M+ + + P+ V+Y+S++ G+C
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK +F+ M + DV ++ II+ C+ K VDE LL E+ + ++A+T YN+
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C+++ A L EM G+ P+ IT N LL C++ ++ A+ L + I+
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I + Y +++ G+CK ++ +A ++F + I G +V+TY+VMI G+C + +A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+L KM+ +G PD TY +IR K GE +K+ +L+ EM
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 15/298 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++ I + +FNIL++ C + + + F + K G +P++V++++L+ G CL
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 61 VNKAKDIFNFMVQRG---------------VTHDVQSYTIIINGLCKIKMVDEAWSLLNE 105
+++A +F +MV+ G +T V ++ +INGLC V EA +L+N+
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
M K + D + Y ++++G+CK+ + A L+++M I P+V+ Y+ ++D LCK H
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
A L ++ E+GI PN++TY ++DG C GR DAQ + +D++ + N +V T++
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+I KEG EA L +M PD VTY +I K + A+ + M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 19/293 (6%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQG---------------LEPNIVSYSSLMD 53
+V TFN L+ LC E + EA +F MV+ G L P ++++++L++
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLIN 234
Query: 54 GYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA 113
G CL V +A + N MV +G+ DV +Y I+NG+CK+ A +LL++M I
Sbjct: 235 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D + Y+++ID LCK DA L +EM +GI PNV TYN ++D C A L+
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
+ + E+ I P++ T+ L+ K G+L +A+++ ++L + + TY+ MI G+CK
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
FD+A + M S PD VT+ II + ++ +LLRE+ R L
Sbjct: 415 NRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 4/277 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TFN L+ LC EG V EA + MV +GL ++V+Y ++++G C + + A ++ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + + DV Y+ II+ LCK +A L +EM K I + YN +IDG C
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R DA +L+ +M R I P+V+T+N L+ K + A L ++ + I P+ TY
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ G CK R DA+ +F D++ +V T++ +ID YC+ DE + L+ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMF-DLMASP---DVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G + + TY +I + A+ L +EM++ +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 138/257 (53%), Gaps = 4/257 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ +CI + T+N ++ CK +AK++F +M P++V++++++D YC K
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 447
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++ + + +RG+ + +Y +I+G C++ ++ A L EM S + DTI N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G C+ E+ +A +L + I + + YN ++ +CK VD A L + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++ TY V++ G C + DA +F + G+ + TY+ +I G K G D+++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 241 ILMSKMESSGCIPDAVT 257
L+S+M S+G DA T
Sbjct: 628 ELISEMRSNGFSGDAFT 644
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 117/220 (53%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TFN +++ C+ V E + + ++GL N +Y++L+ G+C V +N A+D+F
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M+ GV D + I++ G C+ + ++EA L + KI DT+ YN +I G+CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +AW L + G+ P+V TYN ++ C + A L K+++ G +P+ TY
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
L+ G K G + + E+ ++ G++ + T ++ D
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
L G K ++ A D F++MV+ + +I ++ D A SL +M ++
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 111 IIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD--- 167
I + +N LI C + + ++ G P+V+T+N LL LC +
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 168 ------------RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
A+AL ++ E G+ P + T+ L++GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+++V TY +++G CK G AL L+SKME + PD V Y II L K G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 276 KLLREMVARSL 286
L EM+ + +
Sbjct: 317 YLFSEMLEKGI 327
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A T+N L+ C+ N+ A+++F M+ G+ P+ ++ + L+ G+C +++ +A ++
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F + + D +Y III+G+CK VDEAW L + + D YN +I G C
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
DA L ++M G P+ TYN L+ K+ +D++I LI ++ G + +T
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDIL 212
++ D L GRL + F D+L
Sbjct: 645 IKMVAD-LITDGRLDKS---FSDML 665
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 57/277 (20%)
Query: 44 NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
NI S++ L+ +C +++ + F + + G DV ++ +++GLC + EA +L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 104 NEMHSKKIIADTICYNSLIDGLCKLERSF-DAWKLVNEMNHRGIPPNVITYNPLLDVLCK 162
M +E F +A L ++M G+ P VIT+N L++ LC
Sbjct: 200 GYM---------------------VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 163 SHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK-------------------- 202
V A AL+ K+ +G+ ++ TY +++G+CK+G K
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 203 ---------------DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
DAQ +F ++L KG NV TY+ MIDG+C G + +A L+ M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
PD +T+ +I A K+G+ +AEKL EM+ R
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + T NIL+ C+ ++EA +F V+ ++ + V+Y+ ++ G C +
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++A D+F + GV DVQ+Y ++I+G C + +A L ++M D YN+
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVL 160
LI G K + +L++EM G + T + D++
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 652
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 158/281 (56%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ + T+N L+ CK G V+ A+ + V G P+ +Y SL+DG C E
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
N+A +FN + +G+ +V Y +I GL M+ EA L NEM K +I + +N
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++GLCK+ DA LV M +G P++ T+N L+ ++ A+ ++ + + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P++YTY L++GLCK + +D E ++ ++ KG N+ T++++++ C+ DEAL
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L+ +M++ PDAVT+G +I K G+ + A L R+M
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 156/276 (56%), Gaps = 1/276 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ LC EG A +F + +G++PN++ Y++L+ G + +A + N M
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ +VQ++ I++NGLCK+ V +A L+ M SK D +N LI G +
Sbjct: 418 SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKM 477
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A ++++ M G+ P+V TYN LL+ LCK+ + + K + E+G PN++T+ +L
Sbjct: 478 ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ LC+ +L +A + +++ K N + T+ +IDG+CK G D A L KME +
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 252 IPDAV-TYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + TY III A +K AEKL +EMV R L
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 157/287 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
++ Q +V T+N L+ LCK +EA+ MV +GLEP+ +Y++L+ GYC
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V A+ I V G D +Y +I+GLC + A +L NE K I + I YN+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL +A +L NEM+ +G+ P V T+N L++ LCK V A L+K + +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P+++T+ +L+ G ++++A EI +L G + +V TY+ +++G CK F++ +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
M GC P+ T+ I++ +L + + ++A LL EM +S++
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 147/274 (53%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N+ ++ LC+ G + A + +++QG +P++++Y++L+ G C + +A+ M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V G+ D +Y +I G CK MV A ++ + + D Y SLIDGLC +
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L NE +GI PNVI YN L+ L + A L ++ E+G+ P + T+ +L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GLCK+G + DA + + ++ KGY ++ T++++I GY + + AL ++ M +G
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
PD TY ++ L K + E + + MV +
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 149/280 (53%), Gaps = 1/280 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
EV+TFNILV LCK G V +A + VM+ +G P+I +++ L+ GY ++ A +I
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ M+ GV DV +Y ++NGLCK ++ M K + +N L++ LC+
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMY 186
+ +A L+ EM ++ + P+ +T+ L+D CK+ +D A L +K+EE + +
Sbjct: 544 YRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY +++ + + A+++FQ+++ + + TY +M+DG+CK G + + +M
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEM 663
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G IP T G +I L + +A ++ MV + L
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 145/281 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V +F I +++ CK A + M QG E N+V+Y +++ G+ +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F M+ GV+ + ++ ++ LCK V E LL+++ + ++ + YN I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ A ++V + +G P+VITYN L+ LCK+ A + K+ +G++P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
YTY L+ G CK G ++ A+ I D + G+ + TY +IDG C EG + AL L ++
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G P+ + Y +I+ L +G +A +L EM + L
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 141/280 (50%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ V ++N ++ L G +A V+ M +G+ P++ S++ M +C + A
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ N M +G +V +Y ++ G + E + L +M + + +N L+ LC
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K + KL++++ RG+ PN+ TYN + LC+ +D A+ ++ + EQG +P++
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY L+ GLCK + ++A+ ++ +G + TY+ +I GYCK G+ A ++
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G +PD TY +I L +GE +A L E + + +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 48 YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH 107
Y M Y +V +A ++F M V SY I++ L D+A + M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 108 SKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD 167
+ I D + + CK R A +L+N M+ +G NV+ Y ++ + +
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 168 RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
L K+ G+ + T+ L+ LCK G +K+ +++ ++ +G N+ TY++ I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
G C+ G D A+ ++ + G PD +TY +I L K + ++AE L +MV L
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ + T+NI++ A ++ NV A+ +F MV + L P+ +Y ++DG+C VN
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD---TIC 117
M++ G + + +IN LC V EA +++ M K ++ + TIC
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTIC 712
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV +C+ + T+ ++V+ CK GNV M++ G P++ + +++ C+
Sbjct: 628 MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKI-KMVDEAWSLLNEMHSKKIIADTICYN 119
V +A I + MVQ+G+ + +N +C + K A L+ E KK Y
Sbjct: 688 VYEAAGIIHRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYE 741
Query: 120 SLIDGL 125
L DGL
Sbjct: 742 LLFDGL 747
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 162/281 (57%), Gaps = 4/281 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ +V TFN L+ A KEG + EA+ + M+ + + P+ V+Y+S++ G+C
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK +F+ M + DV ++ II+ C+ K VDE LL E+ + ++A+T YN+
Sbjct: 417 FDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G C+++ A L EM G+ P+ IT N LL C++ ++ A+ L + I+
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I + Y +++ G+CK ++ +A ++F + I G +V+TY+VMI G+C + +A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+L KM+ +G PD TY +IR K GE +K+ +L+ EM
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 15/298 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++ I + +FNIL++ C + + + F + K G +P++V++++L+ G CL
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 61 VNKAKDIFNFMVQRG---------------VTHDVQSYTIIINGLCKIKMVDEAWSLLNE 105
+++A +F +MV+ G +T V ++ +INGLC V EA +L+N+
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
M K + D + Y ++++G+CK+ + A L+++M I P+V+ Y+ ++D LCK H
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
A L ++ E+GI PN++TY ++DG C GR DAQ + +D++ + N +V T++
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+I KEG EA L +M PD VTY +I K + A+ + M +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 156/294 (53%), Gaps = 19/294 (6%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG---------------LEPNIVSYSSLM 52
+V TFN L+ LC E + EA +F MV+ G L P ++++++L+
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLI 233
Query: 53 DGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
+G CL V +A + N MV +G+ DV +Y I+NG+CK+ A +LL++M I
Sbjct: 234 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIK 293
Query: 113 ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
D + Y+++ID LCK DA L +EM +GI PNV TYN ++D C A L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 173 IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
++ + E+ I P++ T+ L+ K G+L +A+++ ++L + + TY+ MI G+CK
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
FD+A + M S PD VT+ II + ++ +LLRE+ R L
Sbjct: 414 HNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 4/277 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TFN L+ LC EG V EA + MV +GL ++V+Y ++++G C + + A ++ +
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + + DV Y+ II+ LCK +A L +EM K I + YN +IDG C
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R DA +L+ +M R I P+V+T+N L+ K + A L ++ + I P+ TY
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ G CK R DA+ +F D++ + +V T++ +ID YC+ DE + L+ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMF-DLMA---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G + + TY +I + A+ L +EM++ +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 147/282 (52%), Gaps = 4/282 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ +CI + T+N ++ CK +AK++F +M P++V++++++D YC K
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKR 447
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++ + + +RG+ + +Y +I+G C++ ++ A L EM S + DTI N
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G C+ E+ +A +L + I + + YN ++ +CK VD A L + G
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++P++ TY V++ G C + DA +F + G+ + TY+ +I G K G D+++
Sbjct: 568 VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSI 627
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
L+S+M S+G DA T + + + + E E LR +
Sbjct: 628 ELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKI 669
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
L G K ++ A D F++MV+ + +I ++ D A SL +M ++
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 111 IIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD--- 167
I + +N LI C + + ++ G P+V+T+N LL LC +
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 168 ------------RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
A+AL ++ E G+ P + T+ L++GLC GR+ +A + ++ KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+++V TY +++G CK G AL L+SKME + PD V Y II L K G + A+
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 276 KLLREMVARSL 286
L EM+ + +
Sbjct: 317 YLFSEMLEKGI 327
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 57/279 (20%)
Query: 44 NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
NI S++ L+ +C +++ + F + + G DV ++ +++GLC + EA +L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 104 NEMHSKKIIADTICYNSLIDGLCKLERSF-DAWKLVNEMNHRGIPPNVITYNPLLDVLCK 162
M +E F +A L ++M G+ P VIT+N L++ LC
Sbjct: 200 GYM---------------------VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCL 238
Query: 163 SHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK-------------------- 202
V A AL+ K+ +G+ ++ TY +++G+CK+G K
Sbjct: 239 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 203 ---------------DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
DAQ +F ++L KG NV TY+ MIDG+C G + +A L+ M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD +T+ +I A K+G+ +AEKL EM+ R +
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/295 (33%), Positives = 155/295 (52%), Gaps = 16/295 (5%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A+V T+ I+V++ CK G +++A+ F M + G PN+V+Y++L+ Y K+V+ A ++
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT------------ 115
F M+ G ++ +Y+ +I+G CK V++A + M K + D
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 116 ----ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA 171
+ Y +L+DG CK R +A KL++ M+ G PN I Y+ L+D LCK +D A
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 172 LIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC 231
+ ++ E G +YTY+ L+D KV R A ++ +L NV Y+ MIDG C
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 232 KEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
K G DEA LM ME GC P+ VTY +I G+ E +LL M ++ +
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGV 810
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 151/288 (52%), Gaps = 16/288 (5%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ L+ A K V A +F M+ +G PNIV+YS+L+DG+C +V KA IF
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 70 FMVQRGVTHDVQ----------------SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA 113
M DV +Y +++G CK V+EA LL+ M +
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
+ I Y++LIDGLCK+ + +A ++ EM+ G P + TY+ L+D K D A ++
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
K+ E PN+ YT ++DGLCKVG+ +A ++ Q + KG NV TY+ MIDG+
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G + L L+ +M S G P+ VTY ++I K G + A LL EM
Sbjct: 793 GKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q + T++ ++ LC ++ A +F M + GL ++ +Y+ ++D +C
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+ FN M + G T +V +YT +I+ K K V A L M S+ + + + Y++
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 LIDGLCKLERSFDAWKLVNEM-NHRGIP---------------PNVITYNPLLDVLCKSH 164
LIDG CK + A ++ M + +P PNV+TY LLD CKSH
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
V+ A L+ + +G +PN Y L+DGLCKVG+L +AQE+ ++ G+ + TYS
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ID Y K D A ++SKM + C P+ V Y +I L K G+ ++A KL++ M
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 140/273 (51%), Gaps = 16/273 (5%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVM------------VKQ----GLEPNIVSYSSLMDGY 55
T++ L++ CK G V++A +F M KQ PN+V+Y +L+DG+
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 56 CLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT 115
C V +A+ + + M G + Y +I+GLCK+ +DEA + EM A
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
Y+SLID K++R A K++++M PNV+ Y ++D LCK D A L++
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+EE+G QPN+ TYT ++DG +G+++ E+ + + KG N TY V+ID CK G
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
D A L+ +M+ + Y +I K+
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 149/276 (53%), Gaps = 2/276 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ L++ CK V+EA+ + M +G EPN + Y +L+DG C V ++++A+++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G + +Y+ +I+ K+K D A +L++M + + Y +IDGLCK+
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
++ +A+KL+ M +G PNV+TY ++D ++ + L++++ +G+ PN TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
VL+D CK G L A + +++ + + Y +I+G+ KE F E+L L+ ++
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQD 876
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
P Y ++I L K E A +LL E+ S
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 146/303 (48%), Gaps = 22/303 (7%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+++ + FN LV A C G+ A + MVK G P V Y+ L+ C K+
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 61 ------VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD 114
++ A+ ++ M+ GV + + + LC ++A+S++ EM + I D
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482
Query: 115 TICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
T Y+ +++ LC + A+ L EM G+ +V TY ++D CK+ +++A
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
++ E G PN+ TYT L+ K ++ A E+F+ +L +G N+ TYS +IDG+CK G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 235 LFDEALILMSKMESSGCIPD----------------AVTYGIIIRALFKKGENEKAEKLL 278
++A + +M S +PD VTYG ++ K E+A KLL
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 279 REM 281
M
Sbjct: 663 DAM 665
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T++ L+ + + K V +M+ +G P+ ++SL+ YC + + A +
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIK------MVDEAWSLLNEMHSKKIIADTICYNSLID 123
MV+ G Y I+I +C K ++D A +EM + ++ + I +S
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
LC + A+ ++ EM +G P+ TY+ +L+ LC + ++ A L ++++ G+
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
++YTYT+++D CK G ++ A++ F ++ G NV TY+ +I Y K A L
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M S GC+P+ VTY +I K G+ EKA ++ M
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ L+ LC+ +EA + M PN+V+YS+L+ G K++ + K + N M+
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G + + +++ C A+ LL +M + + YN LI +C + S
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 133 D------AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ A K +EM G+ N I + LC + ++A ++I+++ QG P+
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY+ +++ LC +++ A +F+++ G +V TY++M+D +CK GL ++A ++M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
GC P+ VTY +I A K + A +L M++
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A + T++ L++ K A V + M++ PN+V Y+ ++DG C V + ++A +
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M ++G +V +YT +I+G I ++ LL M SK + + + Y LID CK
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A L+ EM P + Y +++ K ++ L+ +I + P +
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSV 884
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNL--NVRTYSVMIDGYCKEGLFDEALILMSK 245
Y +L+D L K RL+ A + +++ L TY+ +I+ C + A L S+
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
M G IP+ ++ +I+ LF+ + +A LL
Sbjct: 945 MTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 120/282 (42%), Gaps = 21/282 (7%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCL------VKEVNKAK 65
T+N L++A K + A + M L MDG+ L + +V K +
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLR---------MDGFTLRCFAYSLCKVGKWR 287
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + D YT +I+GLC+ + +EA LN M + + + + Y++L+ G
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
++ +++N M G P+ +N L+ C S A L+KK+ + G P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 186 YTYTVLMDGLC------KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
Y +L+ +C L A++ + ++L G LN S C G +++A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
++ +M G IPD TY ++ L + E A L EM
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 9/280 (3%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
N+LV C+ G+ A + P+ +Y+ L+ + ++ A I M
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ D + LCK+ EA +L+ ++ + DT+ Y LI GLC+
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLV---ETENFVPDTVFYTKLISGLCEASLFE 319
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A +N M PNV+TY+ LL + R ++ + +G P+ + L+
Sbjct: 320 EAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLV 379
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE------GLFDEALILMSKM 246
C G A ++ + ++ G+ Y+++I C + L D A S+M
Sbjct: 380 HAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEM 439
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++G + + + R L G+ EKA ++REM+ +
Sbjct: 440 LAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L++ CK G + A N+ M + + Y +++G+ KE ++ + + +
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEI 873
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM--HSKKIIADTICYNSLIDGLCKLE 129
Q + Y ++I+ L K + ++ A LL E+ S ++ + YNSLI+ LC
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ A++L +EM +G+ P + ++ L+ L ++ + A+ L+ I IQ
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 166/308 (53%), Gaps = 35/308 (11%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V FNIL+ CKEGN+ +A+ VF + K+ L+P +VS+++L++GYC V +++ + +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM------------------HS--- 108
M + DV +Y+ +IN LCK +D A L +EM HS
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 109 --------------KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
K + D + YN+L++G CK A +V+ M RG+ P+ ITY
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+D C+ V+ A+ + K++++ GI+ + ++ L+ G+CK GR+ DA+ +++L
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G + TY++M+D +CK+G L+ +M+S G +P VTY +++ L K G+ + A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 275 EKLLREMV 282
+ LL M+
Sbjct: 540 DMLLDAML 547
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 144/277 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
D +R L++ + K + ++ G N+ ++ LM+ +C ++ A+
Sbjct: 201 FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQ 260
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F+ + +R + V S+ +ING CK+ +DE + L ++M + D Y++LI+ L
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK + A L +EM RG+ PN + + L+ ++ +D +K+ +G+QP++
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y L++G CK G L A+ I ++ +G + TY+ +IDG+C+ G + AL + +
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M+ +G D V + ++ + K+G AE+ LREM+
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + ++ +N LV CK G++ A+N+ M+++GL P+ ++Y++L+DG+C +
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V A +I M Q G+ D ++ ++ G+CK V +A L EM I D + Y
Sbjct: 431 VETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTM 490
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++D CK + +KL+ EM G P+V+TYN LL+ LCK + A L+ + G
Sbjct: 491 MMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG 550
Query: 181 IQPNMYTYTVLMDG 194
+ P+ TY L++G
Sbjct: 551 VVPDDITYNTLLEG 564
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF---MVQRGVTHDV 80
G + +A F + K + I +L+D + ++N I+ F ++ G +V
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLD---RMMKLNPTGTIWGFYMEILDAGFPLNV 240
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNE 140
+ I++N CK + +A + +E+ + + + +N+LI+G CK+ + ++L ++
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 141 MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGR 200
M P+V TY+ L++ LCK + +D A L ++ ++G+ PN +T L+ G + G
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
+ +E +Q +L KG ++ Y+ +++G+CK G A ++ M G PD +TY
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 261 IIRALFKKGENEKAEKLLREM 281
+I + G+ E A ++ +EM
Sbjct: 421 LIDGFCRGGDVETALEIRKEM 441
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 1/272 (0%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNI-VSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
L+E + A +VF +V+ + P +LM Y + + A F +
Sbjct: 140 LIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKH 199
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
++ +++ + K+ W E+ + +N L++ CK DA
Sbjct: 200 RFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDA 259
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
K+ +E+ R + P V+++N L++ CK ++D L ++E+ +P+++TY+ L++
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LCK ++ A +F ++ +G N ++ +I G+ + G D KM S G PD
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
V Y ++ K G+ A ++ M+ R L
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 155/276 (56%), Gaps = 1/276 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ +TFNIL+ LC G ++A + VM G EP+IV+Y++L+ G+C E+NKA ++F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 69 NFMVQRGV-THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ V + DV +YT +I+G CK + EA SLL++M I + +N L+DG K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A ++ +M G P+V+T+ L+D C+ V + L +++ +G+ PN +T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y++L++ LC RL A+E+ + K Y+ +IDG+CK G +EA +++ +ME
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
C PD +T+ I+I KG +A + +MVA
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLVKEVNKA 64
+ ++ T+N L++ CK + +A +F VK G P++V+Y+S++ GYC ++ +A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ + M++ G+ ++ ++++G K + A + +M S D + + SLIDG
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C++ + ++L EMN RG+ PN TY+ L++ LC + + +A L+ ++ + I P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y ++DG CK G++ +A I +++ K + T++++I G+C +G EA+ +
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
KM + GC PD +T ++ L K G ++A L
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 149/279 (53%), Gaps = 9/279 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF--N 69
T+N+L +LCK G A +F M G+ PN L+ + +++ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
F V+ G V S ++N L K+ V++A L +E + DT +N LI GLC +
Sbjct: 165 FEVE-GCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI-QPNMYTY 188
++ A +L+ M+ G P+++TYN L+ CKS+ +++A + K ++ + P++ TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG-YNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
T ++ G CK G++++A + D+L G Y NV T++V++DGY K G A + KM
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S GC PD VT+ +I + G+ + +L EM AR +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN+LV+ K G + A+ + M+ G P++V+++SL+DGYC V +V++ ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
RG+ + +Y+I+IN LC + +A LL ++ SK II YN +IDG CK +
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +V EM + P+ IT+ L+ C + A+++ K+ G P+ T + L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
+ L K G K+A + Q I KG + NV
Sbjct: 494 LSCLLKAGMAKEAYHLNQ-IARKGQSNNV 521
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC-KLERSFDA 134
+ H +Y ++ LCK + D A + M S + + L+ K + F
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L+ G + N LL+ L K V+ A+ L + + T+ +L+ G
Sbjct: 159 ALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES-SGCIP 253
LC VG+ + A E+ + G ++ TY+ +I G+CK ++A + ++S S C P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMV 282
D VTY +I K G+ +A LL +M+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDML 304
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 155/276 (56%), Gaps = 1/276 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ +TFNIL+ LC G ++A + VM G EP+IV+Y++L+ G+C E+NKA ++F
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264
Query: 69 NFMVQRGV-THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ V + DV +YT +I+G CK + EA SLL++M I + +N L+DG K
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A ++ +M G P+V+T+ L+D C+ V + L +++ +G+ PN +T
Sbjct: 325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y++L++ LC RL A+E+ + K Y+ +IDG+CK G +EA +++ +ME
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEME 444
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
C PD +T+ I+I KG +A + +MVA
Sbjct: 445 KKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVA 480
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 151/273 (55%), Gaps = 3/273 (1%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLVKEVNKA 64
+ ++ T+N L++ CK + +A +F VK G P++V+Y+S++ GYC ++ +A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ + M++ G+ ++ ++++G K + A + +M S D + + SLIDG
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C++ + ++L EMN RG+ PN TY+ L++ LC + + +A L+ ++ + I P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y ++DG CK G++ +A I +++ K + T++++I G+C +G EA+ +
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
KM + GC PD +T ++ L K G ++A L
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 149/279 (53%), Gaps = 9/279 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF--N 69
T+N+L +LCK G A +F M G+ PN L+ + +++ A + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
F V+ G V S ++N L K+ V++A L +E + DT +N LI GLC +
Sbjct: 165 FEVE-GCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI-QPNMYTY 188
++ A +L+ M+ G P+++TYN L+ CKS+ +++A + K ++ + P++ TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG-YNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
T ++ G CK G++++A + D+L G Y NV T++V++DGY K G A + KM
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMI 339
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S GC PD VT+ +I + G+ + +L EM AR +
Sbjct: 340 SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN+LV+ K G + A+ + M+ G P++V+++SL+DGYC V +V++ ++ M
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
RG+ + +Y+I+IN LC + +A LL ++ SK II YN +IDG CK +
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +V EM + P+ IT+ L+ C + A+++ K+ G P+ T + L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
+ L K G K+A + Q I KG + NV
Sbjct: 494 LSCLLKAGMAKEAYHLNQ-IARKGQSNNV 521
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 5/209 (2%)
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC-KLERSFDA 134
+ H +Y ++ LCK + D A + M S + + L+ K + F
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L+ G + N LL+ L K V+ A+ L + + T+ +L+ G
Sbjct: 159 ALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRG 215
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES-SGCIP 253
LC VG+ + A E+ + G ++ TY+ +I G+CK ++A + ++S S C P
Sbjct: 216 LCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSP 275
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMV 282
D VTY +I K G+ +A LL +M+
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDML 304
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 154/278 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I +V TFNIL+ LC EG+ +++ + M K G P IV+Y++++ YC
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
A ++ + M +GV DV +Y ++I+ LC+ + + + LL +M + I + + YN+
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+G + A +L+NEM G+ PN +T+N L+D + A+ + +E +G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P+ +Y VL+DGLCK A+ + + G + TY+ MIDG CK G DEA+
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+L+++M G PD VTY +I K G + A++++
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV 501
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 148/272 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN L++ EGN KEA +F +M +GL P+ VSY L+DG C E + A+ + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ GV +YT +I+GLCK +DEA LLNEM I D + Y++LI+G CK+ R
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A ++V + G+ PN I Y+ L+ C+ + AI + + + +G + +T+ VL
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ LCK G++ +A+E + + G N ++ +I+GY G +A + +M G
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
P TYG +++ L K G +AEK L+ + A
Sbjct: 615 HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 142/276 (51%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ EG V A + M+ GL PN V++++L+DG+ +A +F M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G+T SY ++++GLCK D A M + I Y +IDGLCK
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A L+NEM+ GI P+++TY+ L++ CK A ++ +I G+ PN Y+ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ C++G LK+A I++ ++++G+ + T++V++ CK G EA M M S G
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+P+ V++ +I GE KA + EM H
Sbjct: 580 LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 140/283 (49%), Gaps = 1/283 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+L+ + TFN+LV +LCK G V EA+ M G+ PN VS+ L++GY E
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
KA +F+ M + G +Y ++ GLCK + EA L +H+ DT+ YN+
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ +CK A L EM R I P+ TY L+ LC+ AI K+ E +G
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Query: 181 -IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+ PN YT +DG+ K G+ K + + G+ ++ T + MIDGY + G ++
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
L+ +M + P+ TY I++ K+ + + L R ++
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSII 821
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
ID ++ T++ L+ CK G K AK + + + GL PN + YS+L+ C + + +A
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I+ M+ G T D ++ +++ LCK V EA + M S I+ +T+ ++ LI+G
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
A+ + +EM G P TY LL LCK H+ A +K + +
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y L+ +CK G L A +F +++ + + TY+ +I G C++G A++ +
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 246 MESSG-CIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
E+ G +P+ V Y + +FK G+ KA RE
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQ-WKAGIYFRE 748
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 142/274 (51%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +++ LCK G + EA + M K G++P+IV+YS+L++G+C V AK+I +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G++ + Y+ +I C++ + EA + M + D +N L+ LCK +
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + + M GI PN ++++ L++ S +A ++ ++ + G P +TY L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GLCK G L++A++ + + ++ Y+ ++ CK G +A+ L +M
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+PD+ TY +I L +KG+ A +E AR
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L + V T N ++ ++ K G + M+K+ + P++ +++ L++ C
Sbjct: 189 MGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGS 248
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
K+ + M + G + +Y +++ CK A LL+ M SK + AD YN
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNM 308
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI LC+ R + L+ +M R I PN +TYN L++ V A L+ ++ G
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN T+ L+DG G K+A ++F + KG + +Y V++DG CK FD A
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLAR 428
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M+ +G +TY +I L K G ++A LL EM
Sbjct: 429 GFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 49/318 (15%)
Query: 12 TFNILVEA--------LCKEGNVKEAKNVF---AVMVKQGL-EPNIVSYSSLMDGYCLVK 59
T +ILV A + KE ++ K+ F A+M L N Y L+ Y
Sbjct: 118 TTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREG 177
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ + +IF M G V + I+ + K WS L EM +KI D +N
Sbjct: 178 MIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN 237
Query: 120 SLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLL--------------------- 157
LI+ LC E SF+ + L+ +M G P ++TYN +L
Sbjct: 238 ILINVLCA-EGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 158 -----DV---------LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
DV LC+S+ + + L++ + ++ I PN TY L++G G++
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIR 263
A ++ ++L G + N T++ +IDG+ EG F EAL + ME+ G P V+YG+++
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLD 416
Query: 264 ALFKKGENEKAEKLLREM 281
L K E + A M
Sbjct: 417 GLCKNAEFDLARGFYMRM 434
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 145/288 (50%), Gaps = 3/288 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
++L I + T + LV +C+ ++ + + +G+E + +++ L+ C E
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+N A D+ M G++ D + +++ L + E+ +L+EM + I ++ Y
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 121 LIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+GLC++ A+ + EM H+ PPNV + ++ L K D A L++ + +
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNV-AESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+ P + ++T LM CK G + +A E+ + G L++ +Y+V+I G C +G A
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALF-KKGENEKAEKLLREMVARSL 286
L +M+ G + +A TY +IR L ++ A+ +L++++AR
Sbjct: 1059 FELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
Y I+I + M+ ++ + M N+++ + K W + EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
R I P+V T+N L++VLC +++ L++K+E+ G P + TY ++ CK GR K
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
A E+ + KG + +V TY+++I C+ + +L+ M P+ VTY +I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 263 RALFKKGENEKAEKLLREMVARSL 286
+G+ A +LL EM++ L
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGL 369
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 131/274 (47%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ V+ + K G K M G P+IV+ ++++DGY + ++ K D+ M
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ ++ +Y I+++G K K V ++ L + I+ D + +SL+ G+C+
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
K++ RG+ + T+N L+ C + ++ A L+K + GI + T ++
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
L + R ++++ + ++ +G + R Y +I+G C+ G A ++ +M +
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P V ++RAL K G+ ++A LLR M+ L
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKL 1000
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 123/261 (47%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ T N +++ + G +++ ++ M Q PN+ +Y+ L+ GY K+V+ + ++
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
++ G+ D + ++ G+C+ M++ +L + + D +N LI C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A+ LV M GI + T + ++ VL ++H + ++ ++ +QGI P Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L++GLC+VG +K A + ++++ S M+ K G DEA +L+ M
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997
Query: 249 SGCIPDAVTYGIIIRALFKKG 269
+P ++ ++ K G
Sbjct: 998 MKLVPTIASFTTLMHLCCKNG 1018
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
D+ ++ M G P+V T N +L + KS + +K++ ++ I P++ T+ +L+
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ LC G + + + Q + GY + TY+ ++ YCK+G F A+ L+ M+S G
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
D TY ++I L + K LLR+M R +H
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 151/278 (54%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ R+++IL+ L K G E +F M +QG + +Y+ ++DG+C +VNKA +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +G V +Y +I+GL KI +DEA+ L E SK+I + + Y+SLIDG K+
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R +A+ ++ E+ +G+ PN+ T+N LLD L K+ ++ A+ + ++E PN TY
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+L++GLCKV + A +Q++ +G + +Y+ MI G K G EA L + ++
Sbjct: 731 GILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G +PD+ Y +I L A L E R L
Sbjct: 791 NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 151/285 (52%), Gaps = 4/285 (1%)
Query: 6 IDAEVRTFNILVEALCK----EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+D++ RT +I+ +L K G ++ ++ M+ Q P++ ++ MD E
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
K + +F + R D +SY+I+I+GL K +E + L M + + DT YN +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
IDG CK + A++L+ EM +G P V+TY ++D L K +D A L ++ + + I
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
+ N+ Y+ L+DG KVGR+ +A I ++++ KG N+ T++ ++D K +EAL+
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALV 713
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M+ C P+ VTYGI+I L K + KA +EM + +
Sbjct: 714 CFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 147/283 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q +++ N ++ + K G ++ + +F + + P+ SYS L+ G
Sbjct: 508 MINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGF 567
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
N+ ++F M ++G D ++Y I+I+G CK V++A+ LL EM +K + Y S
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+IDGL K++R +A+ L E + I NV+ Y+ L+D K +D A +++++ ++G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN+YT+ L+D L K + +A FQ + N TY ++I+G CK F++A
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ +M+ G P ++Y +I L K G +A L A
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKA 790
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 1/282 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M +DA++ +N+ +++ K G V A F + GL+P+ V+Y+S++ C
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANR 288
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A ++F + + +Y +I G DEA+SLL +K I I YN
Sbjct: 289 LDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNC 348
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ L K+ + +A K+ EM + PN+ TYN L+D+LC++ +D A L +++ G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN+ T +++D LCK +L +A +F+++ K + T+ +IDG K G D+A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ KM S C +++ Y +I+ F G E K+ ++M+
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 150/278 (53%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ T+NIL++ LC+ G + A + M K GL PN+ + + ++D C +++++A +F
Sbjct: 377 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 436
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + T D ++ +I+GL K+ VD+A+ + +M ++I Y SLI
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R D K+ +M ++ P++ N +D + K+ ++ A+ ++I+ + P+ +Y+
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ GL K G + E+F + +G L+ R Y+++IDG+CK G ++A L+ +M++
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
G P VTYG +I L K ++A L E ++ +
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 34/294 (11%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQ 81
K ++E +V +M K P +Y++L+ + V + +F M + G V
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM 141
+T +I G K VD A SLL+EM S + AD + YN ID K+ + AWK +E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
G+ P+ +TY ++ VLCK++ +D A+ + + +E+ P Y Y ++ G G+
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 202 KDAQEIFQDILIKG-------YNL---------------------------NVRTYSVMI 227
+A + + KG YN N+ TY+++I
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILI 384
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
D C+ G D A L M+ +G P+ T I++ L K + ++A + EM
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 139/270 (51%), Gaps = 1/270 (0%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C E+ TF L++ L K G V +A V+ M+ N + Y+SL+ +
Sbjct: 443 CTPDEI-TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
I+ M+ + + D+Q ++ + K ++ ++ E+ +++ + D Y+ LI G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L K + + ++L M +G + YN ++D CK V++A L+++++ +G +P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ TY ++DGL K+ RL +A +F++ K LNV YS +IDG+ K G DEA +++
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ G P+ T+ ++ AL K E +A
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 35/277 (12%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEP------------------------- 43
+ R +NI+++ CK G V +A + M +G EP
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 44 ----------NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKI 93
N+V YSSL+DG+ V +++A I ++Q+G+T ++ ++ +++ L K
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 94 KMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITY 153
+ ++EA M K + + Y LI+GLCK+ + A+ EM +G+ P+ I+Y
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 154 NPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
++ L K+ ++ A AL + + G P+ Y +++GL R DA +F++
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+G ++ +T V++D K ++A I+ + + +G
Sbjct: 826 RGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 2/267 (0%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
+LV A C+ N + M G P++ + ++ G ++ + D+ M +
Sbjct: 105 LLVMARCR--NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKF 162
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
+YT +I + D +L +M + +LI G K R A
Sbjct: 163 KFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L++EM + +++ YN +D K VD A +IE G++P+ TYT ++
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGV 282
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LCK RL +A E+F+ + Y+ MI GY G FDEA L+ + + G IP
Sbjct: 283 LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPS 342
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREM 281
+ Y I+ L K G+ ++A K+ EM
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEM 369
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V ++ L++ K G + EA + ++++GL PN+ +++SL+D +E+N+A
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F M + T + +Y I+INGLCK++ ++A+ EM + + TI Y ++I GL
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K +A L + G P+ YN +++ L + A +L ++ +G+ +
Sbjct: 773 AKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHN 832
Query: 186 YTYTVLMDGLCKVGRLKDA 204
T VL+D L K L+ A
Sbjct: 833 KTCVVLLDTLHKNDCLEQA 851
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%)
Query: 47 SYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM 106
SY+SL+ + + I M G V + ++ G K + E + ++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
K Y +LI + S L +M G P V + L+ K V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
D A++L+ +++ + ++ Y V +D KVG++ A + F +I G + TY+ M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 227 IDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
I CK DEA+ + +E + +P Y +I G+ ++A LL A+
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 2/170 (1%)
Query: 118 YNSLIDGLCKLERSFDAW-KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
YNSL+ + + R+FDA +++ EM+ G P+V T ++ K++ + +++ +
Sbjct: 101 YNSLLLVMARC-RNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ +P YT L+ V +FQ + GY V ++ +I G+ KEG
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D AL L+ +M+SS D V Y + I + K G+ + A K E+ A L
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 155/276 (56%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V NIL++ LC+ +A ++ M + L P++ SY++++ G+C KE+ KA ++ N
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M G + + ++ I+I+ CK +DEA L EM + AD + Y SLI G C
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
L +E+ RG P ITYN L+ CK + A + + + E+G++PN+YTYT
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+DGLC VG+ K+A ++ ++ K N TY+++I+ CK+GL +A+ ++ M+
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
PD +TY I++ L KG+ ++A KLL M+ S
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 39/319 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++A++ + L+ C G + K +F ++++G P ++Y++L+ G+C + +
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A +IF FM++RGV +V +YT +I+GLC + EA LLN M K + + YN
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI--EE 178
+I+ LCK DA ++V M R P+ ITYN LL LC +D A L+ + +
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR----------------- 221
P++ +Y L+ GLCK RL A +I+ D+L++ R
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIY-DLLVEKLGAGDRVTTNILLNSTLKAGDVN 476
Query: 222 -------------------TYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
TY+ MIDG+CK G+ + A L+ KM S P Y ++
Sbjct: 477 KAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLL 536
Query: 263 RALFKKGENEKAEKLLREM 281
+L K+G ++A +L EM
Sbjct: 537 SSLCKEGSLDQAWRLFEEM 555
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 128/241 (53%)
Query: 29 AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIIN 88
A V A+M+K+G N+ +++ L+ G C E KA + M + + DV SY +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIR 185
Query: 89 GLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPP 148
G C+ K +++A L NEM + + LID CK + +A + EM G+
Sbjct: 186 GFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEA 245
Query: 149 NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
+++ Y L+ C +DR AL ++ E+G P TY L+ G CK+G+LK+A EIF
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+ ++ +G NV TY+ +IDG C G EAL L++ M P+AVTY III L K
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 269 G 269
G
Sbjct: 366 G 366
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 150/307 (48%), Gaps = 37/307 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ CK G +KEA +F M+++G+ PN+ +Y+ L+DG C V + +A + N M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 72 VQR-----GVTHDVQ------------------------------SYTIIINGLCKIKMV 96
+++ VT+++ +Y I++ GLC +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 97 DEAWSLLNEM--HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
DEA LL M S D I YN+LI GLCK R A + + + + + +T N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
LL+ K+ V++A+ L K+I + I N TYT ++DG CK G L A+ + + +
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+V Y+ ++ CKEG D+A L +M+ PD V++ I+I K G+ + A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583
Query: 275 EKLLREM 281
E LL M
Sbjct: 584 ESLLVGM 590
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 155/277 (55%), Gaps = 2/277 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
T+NIL+ LC +G++ EA + +M+K +P+++SY++L+ G C +++A DI++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+V++ D + I++N K V++A L ++ KI+ ++ Y ++IDG CK
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A L+ +M + P+V YN LL LCK +D+A L ++++ P++ ++
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+++DG K G +K A+ + + G + ++ TYS +I+ + K G DEA+ KM S
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDS 628
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PDA +++ +GE +K +L++++V + +
Sbjct: 629 GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDI 665
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 143/271 (52%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ L + N + A + + M++ N VS S L++ Y +++ A + M++
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
RG +V ++ I++ GLC+ +A SLL EM ++ D YN++I G C+ +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A +L NEM G +++T+ L+D CK+ +D A+ +K+++ G++ ++ YT L+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
G C G L + +F ++L +G + TY+ +I G+CK G EA + M G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+ TY +I L G+ ++A +LL M+ +
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 59/101 (58%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ V +N L+ +LCKEG++ +A +F M + P++VS++ ++DG ++ A+
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM 106
+ M + G++ D+ +Y+ +IN K+ +DEA S ++M
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 155/274 (56%), Gaps = 7/274 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N +++A+ K+G + + K + M K GL PN V+Y++L+ GYC + + +A I M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
Q V D+ +Y I+INGLC + E L++ M S K+ D + YN+LIDG +L S
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE----QGIQPNMYT 187
+A KL+ +M + G+ N +T+N L LCK ++ A+ +K++E G P++ T
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVT 418
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y L+ KVG L A E+ +++ KG +N T + ++D CKE DEA L++
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G I D VTYG +I F++ + EKA ++ EM
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 157/274 (57%), Gaps = 4/274 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDG---YCLVKEVNKAKDIFN 69
F+I + A EG A +F M++ L+PN+++ ++L+ G Y ++ A+++F+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKL 128
MV+ GV+ +VQ++ +++NG C +++A +L M S+ K+ D + YN+++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R D +L+ +M G+ PN +TYN L+ CK + A +++ +++ + P++ TY
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+L++GLC G +++ E+ + +V TY+ +IDG + GL EA LM +ME+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G + VT+ I ++ L K+ + E + ++E+V
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELV 407
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 151/282 (53%), Gaps = 1/282 (0%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
+ ++ T++ L++A K G++ A + M ++G++ N ++ ++++D C ++++
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
+A ++ N +RG D +Y +I G + + V++A + +EM KI +NSLI
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
GLC ++ A + +E+ G+ P+ T+N ++ CK V++A + + +
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P+ YT +L++GLCK G + A F + LI+ ++ TY+ MI +CK+ EA L
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDL 647
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+S+ME G PD TY I L + G+ + ++LL++ +
Sbjct: 648 LSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 152/283 (53%), Gaps = 4/283 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEA--KNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+ A T NI ++ LCKE +EA + V ++ G P+IV+Y +L+ Y V +++
Sbjct: 376 VKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A ++ M Q+G+ + + I++ LCK + +DEA +LLN H + I D + Y +LI
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G + E+ A ++ +EM I P V T+N L+ LC + A+ ++ E G+ P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ T+ ++ G CK GR++ A E + + + + + T +++++G CKEG+ ++AL
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF 614
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + + D VTY +I A K + ++A LL EM + L
Sbjct: 615 NTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V TFN L+ LC G + A F + + GL P+ +++S++ GYC V KA
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ +N ++ D + I++NGLCK M ++A + N + ++ + DT+ YN++I
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAF 635
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-------- 177
CK ++ +A+ L++EM +G+ P+ TYN + +L + + L+KK
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKR 695
Query: 178 ---------------EQGIQPNMYTYTVLMDGLCKVGRLKD 203
++ + Y+ ++D LC GRLK+
Sbjct: 696 DLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 99 AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD---AWKLVNEMNHRGIPPNVITYNP 155
A + +M K+ + + N+L+ GL + SF A ++ ++M G+ NV T+N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 156 LLDVLCKSHHVDRAIALIKK-IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L++ C ++ A+ ++++ + E + P+ TY ++ + K GRL D +E+ D+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G N TY+ ++ GYCK G EA ++ M+ + +PD TY I+I L G +
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREG 329
Query: 275 EKLLREMVARSLH 287
+L+ M + L
Sbjct: 330 LELMDAMKSLKLQ 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG--- 199
H PP+ ++ L A+ + +K+ ++PN+ T L+ GL +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI-PDAVTY 258
+ A+E+F D++ G +LNV+T++V+++GYC EG ++AL ++ +M S + PD VTY
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSL 286
I++A+ KKG ++LL +M L
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGL 271
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 153/259 (59%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ +++ CK GNV++A ++ ++ L PN+V + +L+DG+C +E+ A+ +F M
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHM 330
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ GV ++ Y +I+G CK + EA LL+EM S + D Y LI+GLC ++
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L +M + I P+ TYN L+ CK +++++A+ L ++ G++PN+ T++ L
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG C V +K A ++ ++ IKG +V TY+ +ID + KE EAL L S M +G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 252 IPDAVTYGIIIRALFKKGE 270
P+ T+ ++ +K+G
Sbjct: 511 HPNDHTFACLVDGFWKEGR 529
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V F LV+ CK + A+++F MVK G++PN+ Y+ L+ G+C + +A + +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++ DV +YTI+INGLC V EA L +M +++I + YNSLI G CK
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A L +EM G+ PN+IT++ L+D C + A+ L ++ +GI P++ TYT
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+D K +K+A ++ D+L G + N T++ ++DG+ KEG A+ +
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ V + +I L + G +A + +M
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 149/282 (52%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V + I + LC++ ++EA+ +F +M K G+ PN+ +YS+++DGYC V +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ ++ + +V + +++G CK + + A SL M + + YN LI G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +A L++EM + P+V TY L++ LC V A L +K++ + I P+
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSS 409
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+ G CK ++ A ++ ++ G N+ T+S +IDGYC A+ L +
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
M G +PD VTY +I A FK+ ++A +L +M+ +H
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 133/258 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV +D + +N L+ CK GN+ EA + + M L P++ +Y+ L++G C+ +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A +F M + +Y +I+G CK +++A L +EM + + + I +++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDG C + A L EM +GI P+V+TY L+D K ++ A+ L + E G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I PN +T+ L+DG K GRL A + +Q+ + N ++ +I+G C+ G A
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRAS 569
Query: 241 ILMSKMESSGCIPDAVTY 258
S M S G PD +Y
Sbjct: 570 RFFSDMRSCGITPDICSY 587
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 132/258 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +V T+ IL+ LC E V EA +F M + + P+ +Y+SL+ GYC + +A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ + M GV ++ +++ +I+G C ++ + A L EM K I+ D + Y +LID
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K +A +L ++M GI PN T+ L+D K + AI ++ +Q N
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+T L++GLC+ G + A F D+ G ++ +Y M+ G+ +E + ++L
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCD 609
Query: 246 MESSGCIPDAVTYGIIIR 263
M +G +P+ + ++ R
Sbjct: 610 MIKTGILPNLLVNQLLAR 627
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 138/279 (49%), Gaps = 3/279 (1%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
+Q + F++L+ + G +EA V + P+ + S+++G + +
Sbjct: 125 IQSPKFSIGVFSLLIMEFLEMGLFEEA---LWVSREMKCSPDSKACLSILNGLVRRRRFD 181
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
+ M+ RG+ DV Y ++ K + + LL+EM S I + Y I
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
LC+ + +A K+ M G+ PN+ TY+ ++D CK+ +V +A L K+I +
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL 301
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
PN+ + L+DG CK L A+ +F ++ G + N+ Y+ +I G+CK G EA+ L
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+S+MES PD TY I+I L + + +A +L ++M
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ CKE N+++A ++ + M G+EPNI+++S+L+DGYC V+++ A ++ M
Sbjct: 411 TYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEM 470
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G+ DV +YT +I+ K + EA L ++M I + + L+DG K R
Sbjct: 471 TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRL 530
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A E N + N + + L++ LC++ ++ RA + GI P++ +Y +
Sbjct: 531 SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSM 590
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
+ G + R+ D + D++ G N+ ++ Y G A L
Sbjct: 591 LKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 10/211 (4%)
Query: 79 DVQS-------YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
D+QS ++++I ++ + +EA + EM K D+ S+++GL + R
Sbjct: 124 DIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREM---KCSPDSKACLSILNGLVRRRRF 180
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
W M RG+ P+V Y L K + L+ ++ GI+PN+Y YT+
Sbjct: 181 DSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIY 240
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ LC+ ++++A+++F+ + G N+ TYS MIDGYCK G +A L ++ +
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+P+ V +G ++ K E A L MV
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 99/204 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++ + TF+ L++ C ++K A ++ M +G+ P++V+Y++L+D +
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEAN 494
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A +++ M++ G+ + ++ +++G K + A E + ++ + + +
Sbjct: 495 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTC 554
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+GLC+ A + ++M GI P++ +Y +L + + + L + + G
Sbjct: 555 LIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTG 614
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDA 204
I PN+ +L G +K A
Sbjct: 615 ILPNLLVNQLLARFYQANGYVKSA 638
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 155/278 (55%), Gaps = 4/278 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGL----EPNIVSYSSLMDGYCLVKEVNKAK 65
V++FN ++ + EG + +V + PN +S++ ++ C ++ V++A
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F M +R D +Y +++GLCK + +DEA LL+EM S+ + YN LIDGL
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK KLV+ M +G PN +TYN L+ LC +D+A++L++++ PN
Sbjct: 268 CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L++GL K R DA + + +GY+LN YSV+I G KEG +EA+ L K
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M GC P+ V Y +++ L ++G+ +A+++L M+A
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 154/270 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+FN++++ALCK V A VF M ++ P+ +Y +LMDG C + +++A + + M
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G + Y ++I+GLCK + L++ M K + + + YN+LI GLC +
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L+ M PN +TY L++ L K A+ L+ +EE+G N + Y+VL
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GL K G+ ++A +++ + KG N+ YSV++DG C+EG +EA ++++M +SGC
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+P+A TY +++ FK G E+A ++ +EM
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 153/272 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ LCKE + EA + M +G P+ V Y+ L+DG C ++ + + + M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G + +Y +I+GLC +D+A SLL M S K I + + Y +LI+GL K R+
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA +L++ M RG N Y+ L+ L K + A++L +K+ E+G +PN+ Y+VL
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DGLC+ G+ +A+EI ++ G N TYS ++ G+ K GL +EA+ + +M+ +GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ Y ++I L G ++A + +M+
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 149/272 (54%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N+L++ LCK+G++ + M +G PN V+Y++L+ G CL +++KA + MV
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ +Y +INGL K + +A LL+ M + + Y+ LI GL K ++
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L +M +G PN++ Y+ L+D LC+ + A ++ ++ G PN YTY+ LM
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G K G ++A ++++++ G + N YSV+IDG C G EA+++ SKM + G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
PD V Y II+ L G + A KL EM+ +
Sbjct: 500 PDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 151/283 (53%), Gaps = 4/283 (1%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C+ EV T+N L+ LC +G + +A ++ MV PN V+Y +L++G + A
Sbjct: 288 CVPNEV-TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ + M +RG + Y+++I+GL K +EA SL +M K + + Y+ L+DG
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LC+ + +A +++N M G PN TY+ L+ K+ + A+ + K++++ G N
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y+VL+DGLC VGR+K+A ++ +L G + YS +I G C G D AL L
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 245 KM---ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+M E PD VTY I++ L + + +A LL M+ R
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 120/231 (51%), Gaps = 5/231 (2%)
Query: 62 NKAKDIFNFMV-----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI 116
+KA D+F+ MV +R V +IIN + ++ ++N + I + +
Sbjct: 129 DKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGL 188
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
+N +I LCKL A ++ M R P+ TY L+D LCK +D A+ L+ ++
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ +G P+ Y VL+DGLCK G L ++ ++ +KG N TY+ +I G C +G
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
D+A+ L+ +M SS CIP+ VTYG +I L K+ A +LL M R H
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 3/204 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+++LV+ LC+EG EAK + M+ G PN +YSSLM G+ +A ++ M
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + Y+++I+GLC + V EA + ++M + I DT+ Y+S+I GLC +
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Query: 133 DAWKLVNEMNHRGIP---PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A KL +EM + P P+V+TYN LLD LC + RA+ L+ + ++G P++ T
Sbjct: 520 AALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCN 579
Query: 190 VLMDGLCKVGRLKDAQEIFQDILI 213
++ L + D F + L+
Sbjct: 580 TFLNTLSEKSNSCDKGRSFLEELV 603
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 54/197 (27%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSS---------------------- 50
+++L++ LC G VKEA V++ M+ G++P+ V+YSS
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 51 ----------------LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC-KI 93
L+DG C+ K++++A D+ N M+ RG DV + +N L K
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589
Query: 94 KMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITY 153
D+ S L E L+ L K +R A +V M + + P T+
Sbjct: 590 NSCDKGRSFLEE---------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTW 634
Query: 154 NPLLDVLCKSHHVDRAI 170
++ +CK ++ AI
Sbjct: 635 AMIVREICKPKKINAAI 651
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 155/277 (55%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N ++ LCK G + AK VFA M++ GL P+ +Y SL+ C +V + + +F+
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M R V D+ ++ +++ + +D+A N + +I D + Y LI G C+
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A L NEM +G +V+TYN +L LCK + A L ++ E+ + P+ YT T
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+DG CK+G L++A E+FQ + K L+V TY+ ++DG+ K G D A + + M S
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+P ++Y I++ AL KG +A ++ EM+++++
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 144/269 (53%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ ++ + GN+ +A F + + GL P+ V Y+ L+ GYC ++ A ++ N M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
Q+G DV +Y I++GLCK KM+ EA L NEM + + D+ LIDG CKL
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A +L +M + I +V+TYN LLD K +D A + + + I P +Y++L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ LC G L +A ++ +++ K V + MI GYC+ G + + KM S G +
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD ++Y +I ++ KA L+++M
Sbjct: 618 PDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 152/286 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + T+ L+ CK+G+V E + VF+ M + + P++V +SS+M +
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KA FN + + G+ D YTI+I G C+ M+ A +L NEM + D + YN+
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ GLCK + +A KL NEM R + P+ T L+D CK ++ A+ L +K++E+
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+ ++ TY L+DG KVG + A+EI+ D++ K +YS++++ C +G EA
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ +M S P + +I+ + G E L +M++
Sbjct: 571 RVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 153/277 (55%), Gaps = 2/277 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ IL++ C++G + A N+ M++QG ++V+Y++++ G C K + +A +FN M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R + D + TI+I+G CK+ + A L +M K+I D + YN+L+DG K+
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A ++ +M + I P I+Y+ L++ LC H+ A + ++ + I+P + ++
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM--ESSG 250
G C+ G D + + ++ +G+ + +Y+ +I G+ +E +A L+ KM E G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+PD TY I+ ++ + ++AE +LR+M+ R ++
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 149/272 (54%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T NI+V ALCK+G +++ + + ++G+ P+IV+Y++L+ Y + +A ++ N
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +G + V +Y +INGLCK + A + EM + D+ Y SL+ CK
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ K+ ++M R + P+++ ++ ++ + +S ++D+A+ ++E G+ P+ YT
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ G C+ G + A + ++L +G ++V TY+ ++ G CK + EA L ++M
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD+ T I+I K G + A +L ++M
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 142/245 (57%), Gaps = 2/245 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T IL++ CK GN++ A +F M ++ + ++V+Y++L+DG+ V +++ AK+I+ M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V + + SY+I++N LC + EA+ + +EM SK I + NS+I G C+ +
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ--GIQPNMYTYT 189
D + +M G P+ I+YN L+ + ++ +A L+KK+EE+ G+ P+++TY
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ G C+ ++K+A+ + + ++ +G N + TY+ MI+G+ + EA + +M
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 250 GCIPD 254
G PD
Sbjct: 722 GFSPD 726
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 142/272 (52%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F++L+ + ++EA F ++ +G +I + ++L+ + V A ++ +
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ GV +V + I++N LCK +++ + L+++ K + D + YN+LI
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A++L+N M +G P V TYN +++ LCK +RA + ++ G+ P+ TY L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
CK G + + +++F D+ + ++ +S M+ + + G D+AL+ + ++ +G I
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
PD V Y I+I+ +KG A L EM+ +
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ +L + G V+ A V+ + + G+ N+ + + +++ C ++ K + + +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
+GV D+ +Y +I+ +++EA+ L+N M K YN++I+GLCK +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A ++ EM G+ P+ TY LL CK V + + + + P++ ++ +M
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
+ G L A F + G + Y+++I GYC++G+ A+ L ++M GC
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D VTY I+ L K+ +A+KL EM R+L
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 106/195 (54%), Gaps = 3/195 (1%)
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
K++ EA++LL SK N+LI L ++ AW + E++ G+ NV
Sbjct: 180 KLREAHEAFTLL---RSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
T N +++ LCK +++ + +++E+G+ P++ TY L+ G +++A E+ +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
KG++ V TY+ +I+G CK G ++ A + ++M SG PD+ TY ++ KKG+
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 272 EKAEKLLREMVARSL 286
+ EK+ +M +R +
Sbjct: 357 VETEKVFSDMRSRDV 371
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 67 IFNFMVQRGVTHDVQS---YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ + +V+ G D QS I +G+ ++++V+ S + S + D + +
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYV-- 176
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
KL + +A+ L + +G ++ N L+ L + V+ A + ++I G+
Sbjct: 177 QARKLREAHEAFTL---LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N+YT ++++ LCK G+++ + KG ++ TY+ +I Y +GL +EA LM
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ M G P TY +I L K G+ E+A+++ EM+ L
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ R+ N L+ K G + K F M+ G P + +Y+ ++D C +V A+ +F
Sbjct: 226 KTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M RG+ D +Y +I+G K+ +D+ EM D I YN+LI+ CK
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ + EM G+ PNV++Y+ L+D CK + +AI + G+ PN YTY
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+D CK+G L DA + ++L G NV TY+ +IDG C EA L KM++
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G IP+ +Y +I K ++A +LL E+ R +
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 146/272 (53%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+NI+++ +CKEG+V+ A+ +F M +GL P+ V+Y+S++DG+ V ++ F
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M DV +Y +IN CK + EM + + + Y++L+D CK
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A K +M G+ PN TY L+D CK ++ A L ++ + G++ N+ TYT
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+DGLC R+K+A+E+F + G N+ +Y+ +I G+ K D AL L+++++
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G PD + YG I L + E A+ ++ EM
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 533
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 152/283 (53%), Gaps = 1/283 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ V T+ L++ LC +KEA+ +F M G+ PN+ SY++L+ G+ K +++A
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ N + RG+ D+ Y I GLC ++ ++ A ++NEM I A+++ Y +L+D
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPN 184
K + L++EM I V+T+ L+D LCK+ V +A+ +I G+Q N
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+T ++DGLCK +++ A +F+ ++ KG + Y+ ++DG K+G EAL L
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
KM G D + Y ++ L + +KA L EM+ +H
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 150/278 (53%), Gaps = 1/278 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +++ LV+A CKEG +++A + M + GL PN +Y+SL+D C + ++ A + N
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+Q GV +V +YT +I+GLC + + EA L +M + +I + YN+LI G K +
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A +L+NE+ RGI P+++ Y + LC ++ A ++ +++E GI+ N YT
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
LMD K G + + ++ + V T+ V+IDG CK L +A+ +++ +
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISND 606
Query: 250 -GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G +A + +I L K + E A L +MV + L
Sbjct: 607 FGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 148/270 (54%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C + +V T+N L+ CK G + + M GL+PN+VSYS+L+D +C + +A
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ M + G+ + +YT +I+ CKI + +A+ L NEM + + + Y +LIDG
Sbjct: 387 IKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDG 446
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LC ER +A +L +M+ G+ PN+ +YN L+ K+ ++DRA+ L+ +++ +GI+P+
Sbjct: 447 LCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPD 506
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y + GLC + +++ A+ + ++ G N Y+ ++D Y K G E L L+
Sbjct: 507 LLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+M+ VT+ ++I L K KA
Sbjct: 567 EMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 107/222 (48%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A F+ M + V +S +++ K+ D+ +M YN
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+ID +CK A L EM RG+ P+ +TYN ++D K +D + +++++
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+P++ TY L++ CK G+L E ++++ G NV +YS ++D +CKEG+ +A+
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M G +P+ TY +I A K G A +L EM+
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 15/231 (6%)
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD---------TIC---- 117
M + G H V+SY I+ + L +M +A S+L EM K D +C
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 118 --YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
+++L L L +A + ++M + P + N LL K D K
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+ G +P ++TY +++D +CK G ++ A+ +F+++ +G + TY+ MIDG+ K G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D+ + +M+ C PD +TY +I K G+ + REM L
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKA 64
I+ V TF +L++ LCK V +A + F + GL+ N +++++DG C +V A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+F MVQ+G+ D +YT +++G K V EA +L ++M + D + Y SL+ G
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC----KSHH----VDRAIAL 172
L + A + EM GI P+ +VLC K H+ +D A+ L
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPD--------EVLCISVLKKHYELGCIDEAVEL 740
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 144/251 (57%), Gaps = 4/251 (1%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
MV+ G P++V++++LM+G C V +A + + MV+ G Q Y IINGLCK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
+ A +LL++M I A + YN++ID LCK A L EM+ +GI P+VITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
++D C+S A L++ + E+ I P++ T++ L++ L K G++ +A+EI+ D+L +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
TY+ MIDG+CK+ ++A ++ M S C PD VT+ +I K +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 276 KLLREMVARSL 286
++ EM R +
Sbjct: 237 EIFCEMHRRGI 247
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 146/278 (52%), Gaps = 4/278 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF L+ LC EG V +A + MV++G +P Y ++++G C + + A ++
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M + + V Y II+ LCK A +L EMH K I D I Y+ +ID C+
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R DA +L+ +M R I P+V+T++ L++ L K V A + + +GI P TY
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++DG CK RL DA+ + + K + +V T+S +I+GYCK D + + +M
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G + + VTY +I + G+ + A+ LL M++ +
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 137/244 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I A V +N +++ LCK+G+ A+N+F M +G+ P++++YS ++D +C A+
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAE 131
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M++R + DV +++ +IN L K V EA + +M + I TI YNS+IDG
Sbjct: 132 QLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGF 191
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R DA ++++ M + P+V+T++ L++ CK+ VD + + ++ +GI N
Sbjct: 192 CKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 251
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G C+VG L AQ++ ++ G N T+ M+ C + +A ++
Sbjct: 252 VTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILED 311
Query: 246 MESS 249
++ S
Sbjct: 312 LQKS 315
Score = 147 bits (372), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 153/277 (55%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ + ++ LCK G+ + A N+ + M + ++ ++V Y++++D C A+++F
Sbjct: 42 QPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTE 101
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M +G+ DV +Y+ +I+ C+ +A LL +M ++I D + +++LI+ L K +
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A ++ +M RGI P ITYN ++D CK ++ A ++ + + P++ T++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L++G CK R+ + EIF ++ +G N TY+ +I G+C+ G D A L++ M SSG
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
P+ +T+ ++ +L K E KA +L ++ H
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEGH 318
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 109/179 (60%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ +V TF+ L+ AL KEG V EA+ ++ M+++G+ P ++Y+S++DG+C
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+N AK + + M + + DV +++ +ING CK K VD + EMH + I+A+T+ Y +
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI G C++ A L+N M G+ PN IT+ +L LC + +A A+++ +++
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 141 MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGR 200
M G P+V+T+ L++ LC V +A+AL+ ++ E+G QP Y +++GLCK+G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
+ A + + +V Y+ +ID CK+G A L ++M G PD +TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 261 IIRALFKKGENEKAEKLLREMVARSLH 287
+I + + G AE+LLR+M+ R ++
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQIN 143
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 61/110 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + +V TF+ L+ CK V +F M ++G+ N V+Y++L+ G+C V +
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
++ A+D+ N M+ GV + ++ ++ LC K + +A+++L ++ +
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 156/273 (57%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ RT N L+ LC+ G + EA + ++ +G + VSY++L+ G C K++++A
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ MV+RG+ D +Y+I+I GL + V+EA ++ ++ D Y+ +IDG CK
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
ER+ + + +EM + + PN + YN L+ C+S + A+ L + ++ +GI PN TY
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+ G+ + R+++A+ +F+++ ++G NV Y+ +IDGY K G + L+ +M S
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P+ +TY ++I + G +A +LL EM
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 146/258 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N L+ C + + EA MVK+GL+P+ +YS L+ G + +V +A ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ DV +Y+++I+G CK + +E +EM SK + +T+ YN LI C+ R
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A +L +M H+GI PN TY L+ + V+ A L +++ +G++PN++ YT L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG K+G++ + + +++ K + N TY+VMI GY ++G EA L+++M G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 252 IPDAVTYGIIIRALFKKG 269
+PD++TY I K+G
Sbjct: 782 VPDSITYKEFIYGYLKQG 799
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSS---------- 50
MV + + T+N L++ CK G A+ + M+ G N S++S
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 51 -------------------------LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
L+ G C + +KA +++ + +G D ++
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+++GLC+ +DEA+ + E+ + + D + YN+LI G C ++ +A+ ++EM RG
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ P+ TY+ L+ L + V+ AI + G+ P++YTY+V++DG CK R ++ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
E F +++ K N Y+ +I YC+ G AL L M+ G P++ TY +I+ +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 266 FKKGENEKAEKLLREM 281
E+A+ L EM
Sbjct: 691 SIISRVEEAKLLFEEM 706
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 156/321 (48%), Gaps = 35/321 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
+V + + +V F + A CK G V+EA +F+ M + G+ PN+V++++++DG +
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI---- 116
++A MV+RG+ + +Y+I++ GL + K + +A+ +L EM K + I
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 117 -------------------------------CYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
YN+LI G CK ++ +A +L+ EM G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
N ++ ++ +LC D A+ + ++ + + P T L+ GLCK G+ A
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
E++ L KG+ ++ RT + ++ G C+ G DEA + ++ GC+ D V+Y +I
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 266 FKKGENEKAEKLLREMVARSL 286
K + ++A L EMV R L
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGL 571
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 139/274 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ + T++ILV+ L + + +A V M K+G PN++ Y++L+D +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+NKA +I + MV +G++ +Y +I G CK D A LL EM S + + S
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I LC A + V EM R + P L+ LCK +A+ L + +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ T L+ GLC+ G+L +A I ++IL +G ++ +Y+ +I G C + DEA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+ + +M G PD TY I+I LF + E+A
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+L+ + L+ LCK G +A ++ + +G + + ++L+ G C +
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A I ++ RG D SY +I+G C K +DEA+ L+EM + + D Y+
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL + + +A + ++ G+ P+V TY+ ++D CK+ + ++ +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+QPN Y L+ C+ GRL A E+ +D+ KG + N TY+ +I G +EA
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+L +M G P+ Y +I K G+ K E LLREM ++++H
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 148/287 (51%), Gaps = 6/287 (2%)
Query: 5 CIDAEVRT--FNILVEALC---KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK 59
C D E+R ++L+E C K A +VF V+ +G+ P+ + + L+
Sbjct: 181 CFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN 240
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
E K + F+ +V +GV+ DV +T IN CK V+EA L ++M + + + +N
Sbjct: 241 EFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
++IDGL R +A+ +M RG+ P +ITY+ L+ L ++ + A ++K++ ++
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G PN+ Y L+D + G L A EI ++ KG +L TY+ +I GYCK G D A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ +M S G + ++ +I L + A + + EM+ R++
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + V +N L+++ + G++ +A + +MV +GL +Y++L+ GYC +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-------------- 106
+ A+ + M+ G + S+T +I LC M D A + EM
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 107 ----------HSKKI-----------IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
HSK + + DT N+L+ GLC+ + +A+++ E+ RG
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ ++YN L+ C +D A + ++ ++G++P+ YTY++L+ GL + ++++A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + D G +V TYSVMIDG CK +E +M S P+ V Y +IRA
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 266 FKKGENEKAEKLLREM 281
+ G A +L +M
Sbjct: 656 CRSGRLSMALELREDM 671
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T++++++ CK +E + F M+ + ++PN V Y+ L+ YC ++ A ++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +G++ + +YT +I G+ I V+EA L EM + + + Y +LIDG KL
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ L+ EM+ + + PN ITY ++ + +V A L+ ++ E+GI P+ TY
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 189 TVLMDGLCKVG----RLKDAQEIFQDILIKGYN 217
+ G K G K + E +I+G+N
Sbjct: 789 KEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWN 821
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 156/273 (57%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ RT N L+ LC+ G + EA + ++ +G + VSY++L+ G C K++++A
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ MV+RG+ D +Y+I+I GL + V+EA ++ ++ D Y+ +IDG CK
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
ER+ + + +EM + + PN + YN L+ C+S + A+ L + ++ +GI PN TY
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+ G+ + R+++A+ +F+++ ++G NV Y+ +IDGY K G + L+ +M S
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P+ +TY ++I + G +A +LL EM
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 146/258 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N L+ C + + EA MVK+GL+P+ +YS L+ G + +V +A ++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ DV +Y+++I+G CK + +E +EM SK + +T+ YN LI C+ R
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A +L +M H+GI PN TY L+ + V+ A L +++ +G++PN++ YT L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG K+G++ + + +++ K + N TY+VMI GY ++G EA L+++M G
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 252 IPDAVTYGIIIRALFKKG 269
+PD++TY I K+G
Sbjct: 782 VPDSITYKEFIYGYLKQG 799
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSS---------- 50
MV + + T+N L++ CK G A+ + M+ G N S++S
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 51 -------------------------LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
L+ G C + +KA +++ + +G D ++
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+++GLC+ +DEA+ + E+ + + D + YN+LI G C ++ +A+ ++EM RG
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ P+ TY+ L+ L + V+ AI + G+ P++YTY+V++DG CK R ++ Q
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
E F +++ K N Y+ +I YC+ G AL L M+ G P++ TY +I+ +
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 266 FKKGENEKAEKLLREM 281
E+A+ L EM
Sbjct: 691 SIISRVEEAKLLFEEM 706
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 156/321 (48%), Gaps = 35/321 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
+V + + +V F + A CK G V+EA +F+ M + G+ PN+V++++++DG +
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI---- 116
++A MV+RG+ + +Y+I++ GL + K + +A+ +L EM K + I
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 117 -------------------------------CYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
YN+LI G CK ++ +A +L+ EM G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
N ++ ++ +LC D A+ + ++ + + P T L+ GLCK G+ A
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
E++ L KG+ ++ RT + ++ G C+ G DEA + ++ GC+ D V+Y +I
Sbjct: 491 ELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC 550
Query: 266 FKKGENEKAEKLLREMVARSL 286
K + ++A L EMV R L
Sbjct: 551 CGKKKLDEAFMFLDEMVKRGL 571
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 139/274 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ + T++ILV+ L + + +A V M K+G PN++ Y++L+D +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+NKA +I + MV +G++ +Y +I G CK D A LL EM S + + S
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I LC A + V EM R + P L+ LCK +A+ L + +G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ T L+ GLC+ G+L +A I ++IL +G ++ +Y+ +I G C + DEA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+ + +M G PD TY I+I LF + E+A
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 144/287 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+L+ + L+ LCK G +A ++ + +G + + ++L+ G C +
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A I ++ RG D SY +I+G C K +DEA+ L+EM + + D Y+
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL + + +A + ++ G+ P+V TY+ ++D CK+ + ++ +
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+QPN Y L+ C+ GRL A E+ +D+ KG + N TY+ +I G +EA
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+L +M G P+ Y +I K G+ K E LLREM ++++H
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 148/287 (51%), Gaps = 6/287 (2%)
Query: 5 CIDAEVRT--FNILVEALC---KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK 59
C D E+R ++L+E C K A +VF V+ +G+ P+ + + L+
Sbjct: 181 CFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRAN 240
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
E K + F+ +V +GV+ DV +T IN CK V+EA L ++M + + + +N
Sbjct: 241 EFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFN 299
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
++IDGL R +A+ +M RG+ P +ITY+ L+ L ++ + A ++K++ ++
Sbjct: 300 TVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK 359
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G PN+ Y L+D + G L A EI ++ KG +L TY+ +I GYCK G D A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ +M S G + ++ +I L + A + + EM+ R++
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM 466
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + V +N L+++ + G++ +A + +MV +GL +Y++L+ GYC +
Sbjct: 356 MTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ 415
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-------------- 106
+ A+ + M+ G + S+T +I LC M D A + EM
Sbjct: 416 ADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTT 475
Query: 107 ----------HSKKI-----------IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
HSK + + DT N+L+ GLC+ + +A+++ E+ RG
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ ++YN L+ C +D A + ++ ++G++P+ YTY++L+ GL + ++++A
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + D G +V TYSVMIDG CK +E +M S P+ V Y +IRA
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 266 FKKGENEKAEKLLREM 281
+ G A +L +M
Sbjct: 656 CRSGRLSMALELREDM 671
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T++++++ CK +E + F M+ + ++PN V Y+ L+ YC ++ A ++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +G++ + +YT +I G+ I V+EA L EM + + + Y +LIDG KL
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ L+ EM+ + + PN ITY ++ + +V A L+ ++ E+GI P+ TY
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 189 TVLMDGLCKVG----RLKDAQEIFQDILIKGYN 217
+ G K G K + E +I+G+N
Sbjct: 789 KEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWN 821
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 161/320 (50%), Gaps = 39/320 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MVL I + TFN+L+ ALC V A+ +F M ++G +PN ++ L+ GYC
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+K ++ N M GV + Y I++ C+ D++ ++ +M + ++ D + +NS
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 121 LIDGLCKLERSFDAWKLVNEM---NHRGIP-PNVITYNPLLDVLCKSHHVDRAIALIKKI 176
I LCK + DA ++ ++M + G+P PN ITYN +L CK ++ A L + I
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 177 EE-----------------------------------QGIQPNMYTYTVLMDGLCKVGRL 201
E +GI P++Y+Y +LMDGLCK+G L
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 202 KDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
DA+ I + G + TY ++ GYC G D A L+ +M + C+P+A T I+
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 262 IRALFKKGENEKAEKLLREM 281
+ +L+K G +AE+LLR+M
Sbjct: 438 LHSLWKMGRISEAEELLRKM 457
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 154/306 (50%), Gaps = 27/306 (8%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQ---GL-EPNIVSYSSLMDGYCLVKEVNKA 64
++ TFN + ALCKEG V +A +F+ M GL PN ++Y+ ++ G+C V + A
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
K +F + + +QSY I + GL + EA ++L +M K I YN L+DG
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LCKL DA +V M G+ P+ +TY LL C VD A +L++++ PN
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
YT +L+ L K+GR+ +A+E+ + + KGY L+ T ++++DG C G D+A+ ++
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 245 KMESSG-----------------------CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M G C+PD +TY ++ L K G +A+ L EM
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 282 VARSLH 287
+ L
Sbjct: 551 MGEKLQ 556
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 23/302 (7%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A ++++NI ++ L + G EA+ V M +G+ P+I SY+ LMDG C + ++ AK I
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M + GV D +Y +++G C + VD A SLL EM + + N L+ L K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ----- 182
+ R +A +L+ +MN +G + +T N ++D LC S +D+AI ++K + G
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 183 ------------------PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
P++ TY+ L++GLCK GR +A+ +F +++ + + Y+
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+ I +CK+G A ++ ME GC TY +I L K + + L+ EM +
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 285 SL 286
+
Sbjct: 624 GI 625
Score = 147 bits (371), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 163/312 (52%), Gaps = 39/312 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +N+L+E+ KE V+ ++ MV G+ P +++ L+ C V+ A+++F+
Sbjct: 112 VYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFD 171
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++G + ++ I++ G CK + D+ LLN M S ++ + + YN+++ C+
Sbjct: 172 EMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREG 231
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ---GI-QPNM 185
R+ D+ K+V +M G+ P+++T+N + LCK V A + +E G+ +PN
Sbjct: 232 RNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNS 291
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDIL-------IKGYNL-------------------- 218
TY +++ G CKVG L+DA+ +F+ I ++ YN+
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 219 --------NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ +Y++++DG CK G+ +A ++ M+ +G PDAVTYG ++ G+
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 271 NEKAEKLLREMV 282
+ A+ LL+EM+
Sbjct: 412 VDAAKSLLQEMM 423
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 23/309 (7%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I + ++NIL++ LCK G + +AK + +M + G+ P+ V+Y L+ GYC V +
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ AK + M++ + + I+++ L K+ + EA LL +M+ K DT+ N
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIP-----------------------PNVITYNPLL 157
++DGLC A ++V M G P++ITY+ LL
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ LCK+ A L ++ + +QP+ Y + + CK G++ A + +D+ KG +
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCH 591
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
++ TY+ +I G + E LM +M+ G P+ TY I+ L + + E A L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651
Query: 278 LREMVARSL 286
L EM+ +++
Sbjct: 652 LDEMMQKNI 660
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 26/298 (8%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLE-----------------------PNIVSY 48
T NI+V+ LC G + +A + M G P++++Y
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 49 SSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS 108
S+L++G C +AK++F M+ + D +Y I I+ CK + A+ +L +M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 109 KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
K YNSLI GL + F+ L++EM +GI PN+ TYN + LC+ V+
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVED 647
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD-ILIKGYNLNVRTYSVMI 227
A L+ ++ ++ I PN++++ L++ CKV AQE+F+ + I G + YS+M
Sbjct: 648 ATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL--YSLMF 705
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+ G +A L+ + G Y ++ +L KK E E A +L +M+ R
Sbjct: 706 NELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG 763
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 139/276 (50%), Gaps = 11/276 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ L+ LCK G EAKN+FA M+ + L+P+ V+Y+ + +C +++ A + M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G +++Y +I GL + E L++EM K I + YN+ I LC+ E+
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI-----EEQGIQPNMY 186
DA L++EM + I PNV ++ L++ CK D A + + +++G+
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL----- 700
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
Y+++ + L G+L A E+ + +L +G+ L Y +++ CK+ + A ++ KM
Sbjct: 701 -YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G D +I L K G ++A +M+
Sbjct: 760 IDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 4/249 (1%)
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
+P++ Y+ L++ + V ++ MV G+ ++ ++I LC VD A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
L +EM K + + L+ G CK + +L+N M G+ PN + YN ++ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY----N 217
+ D + +++K+ E+G+ P++ T+ + LCK G++ DA IF D+ + Y
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
N TY++M+ G+CK GL ++A L + + + +Y I ++ L + G+ +AE +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 278 LREMVARSL 286
L++M + +
Sbjct: 349 LKQMTDKGI 357
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 5/226 (2%)
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI----IADTICYNS 120
K IF+ + + + I L + KM +E L N + S I ++ + S
Sbjct: 24 KRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVS 83
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+ ++++F ++LV P+V YN LL+ K V+ L K + G
Sbjct: 84 IFAKSNHIDKAFPQFQLVRSRFPEN-KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCG 142
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I P YT+ +L+ LC + A+E+F ++ KG N T+ +++ GYCK GL D+ L
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L++ MES G +P+ V Y I+ + ++G N+ +EK++ +M L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGL 248
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ T+N L+ L + + E + M ++G+ PNI +Y++ + C ++V A ++ +
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC------YNSLID 123
M+Q+ + +V S+ +I CK+ D A + A +IC Y+ + +
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE-------TAVSICGQKEGLYSLMFN 706
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
L + A +L+ + RG Y L++ LCK ++ A ++ K+ ++G
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
+ ++DGL K+G K+A F D +++
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANS-FADKMME 796
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T+N ++ LC+ V++A N+ M+++ + PN+ S+ L++ +C V + + A+
Sbjct: 625 ISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQ 684
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F V Y+++ N L + +A LL + + T Y L++ L
Sbjct: 685 EVFETAVSI-CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
CK + A ++++M RG + P++D L K + A + K+ E
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 154/276 (55%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VRTFN L+E LC+ G +A ++ M+ GL P+IVSY+ L+DG C +N A + +
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + D ++T IIN CK D A + L M K I D + +LIDG+CK+
Sbjct: 466 SMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVG 525
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
++ DA ++ + I + N +LD+L K V +A++ KI + G+ P++ TYT
Sbjct: 526 KTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+DGL + G + + I + + + G NV Y+++I+G C+ G +EA L+S M+ S
Sbjct: 586 TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G P+ VTY ++++ G+ ++A + +R MV R
Sbjct: 646 GVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 162/316 (51%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + V T+ +L++ LC++G ++EA V MVK + P++++Y++L++GYC
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V A ++ M +R +V+++ ++ GLC++ +A LL M + D + YN
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDGLC+ A+KL++ MN I P+ +T+ +++ CK D A A + + +G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQ------------------DILIKGYNL---- 218
I + T T L+DG+CKVG+ +DA I + D+L KG +
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 219 -------------NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+V TY+ ++DG + G + ++ M+ SGC+P+ Y III L
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 266 FKKGENEKAEKLLREM 281
+ G E+AEKLL M
Sbjct: 627 CQFGRVEEAEKLLSAM 642
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 154/272 (56%), Gaps = 1/272 (0%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
L+ C+ N+++A VF VM K+ PN VSYS L+ G C V + +A + + M ++
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G ++YT++I LC ++D+A++L +EM + + Y LIDGLC+ + +A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+ +M I P+VITYN L++ CK V A L+ +E++ +PN+ T+ LM+G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LC+VG+ A + + +L G + ++ +Y+V+IDG C+EG + A L+S M PD
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+T+ II A K+G+ + A L M+ + +
Sbjct: 476 CLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 153/271 (56%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+++IL+ LC+ G ++EA + M ++G +P+ +Y+ L+ C ++KA ++F+ M
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ RG +V +YT++I+GLC+ ++EA + +M +I I YN+LI+G CK R
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A++L+ M R PNV T+N L++ LC+ +A+ L+K++ + G+ P++ +Y VL
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DGLC+ G + A ++ + + T++ +I+ +CK+G D A + M G
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGI 507
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
D VT +I + K G+ A +L +V
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 156/281 (55%), Gaps = 2/281 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ ++N+L++ LC+EG++ A + + M +EP+ ++++++++ +C + + A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
M+++G++ D + T +I+G+CK+ +A +L + +I+ N ++D L
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + + ++ ++N G+ P+V+TY L+D L +S + + +++ ++ G PN+
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y YT++++GLC+ GR+++A+++ + G + N TY+VM+ GY G D AL +
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 246 MESSGCIPDAVTYGIIIRA--LFKKGENEKAEKLLREMVAR 284
M G + Y +++ L +KG + E + ++ R
Sbjct: 677 MVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALR 717
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 155/366 (42%), Gaps = 89/366 (24%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ + TF ++ A CK+G A +M+++G+ + V+ ++L+DG C V + A
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 66 DIFNFMVQR-----------------------------------GVTHDVQSYTIIINGL 90
I +V+ G+ V +YT +++GL
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
+ + ++ +L M + + Y +I+GLC+ R +A KL++ M G+ PN
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG---------------- 194
+TY ++ + +DRA+ ++ + E+G + N Y+ L+ G
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711
Query: 195 -------------------------------------LCKVGRLKDAQEIFQDILIKGYN 217
LCK GR ++ ++ Q++L +G
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
L + ++++ YC + + + L++ + SG +P ++ ++I+ L K+G+ E+A +L
Sbjct: 772 LE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
Query: 278 LREMVA 283
+ E++
Sbjct: 831 VMELLT 836
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
CY+SL+ L KL+ F A+ M G +I Y +++ LCK+ + + A + KI
Sbjct: 162 CYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI 221
Query: 177 EEQGI------------------------------------QPNMYTYTVLMDGLCKVGR 200
+ G PN +Y++L+ GLC+VGR
Sbjct: 222 LKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGR 281
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
L++A + + KG + RTY+V+I C GL D+A L +M GC P+ TY +
Sbjct: 282 LEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTV 341
Query: 261 IIRALFKKGENEKAEKLLREMV 282
+I L + G+ E+A + R+MV
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMV 363
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 59/297 (19%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ N++++ L K VKE + + K GL P++V+Y++L+DG ++ + I M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC---KL 128
G +V YTIIINGLC+ V+EA LL+ M + + + Y ++ G KL
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 129 ERSFDAWKLVNE------------------MNHRGIP----------------PNVITYN 154
+R+ + + + E ++ +GI P I N
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECI--N 725
Query: 155 PLLDV------------------LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
L+ V LCK D + L++ + E+G+ ++M+ C
Sbjct: 726 ELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYC 784
Query: 197 KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL-ILMSKMESSGCI 252
+ E+ +L G+ + +++ ++I G KEG + A ++M + S+G +
Sbjct: 785 SKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVV 841
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 36/177 (20%)
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
G N Y+ LL L K A +++E G M Y +++ LCK G + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 205 QEIFQDILIKGY----------------NLNVR--------------------TYSVMID 228
+ IL G+ LN+R +YS++I
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G C+ G +EA L +M GC P TY ++I+AL +G +KA L EM+ R
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 155/277 (55%), Gaps = 1/277 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T N+LV+ALCK+ +++ A V + GL PN+V+Y++++ GY ++ AK
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M+ RG D +YT++++G CK+ EA +++++M +I + + Y +I L
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK ++S +A + +EM R P+ ++D LC+ H VD A L +K+ + P+
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDN 366
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ L+ LCK GR+ +A+++F D KG ++ TY+ +I G C++G EA L
Sbjct: 367 ALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDD 425
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M C P+A TY ++I L K G ++ ++L EM+
Sbjct: 426 MYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 145/275 (52%), Gaps = 4/275 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ T+ +L++ CK G EA V M K +EPN V+Y ++ C K+ +A+++
Sbjct: 259 PDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNM 318
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F+ M++R D +I+ LC+ VDEA L +M + D ++LI LCK
Sbjct: 319 FDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCK 378
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A KL +E +G P+++TYN L+ +C+ + A L + E+ +PN +T
Sbjct: 379 EGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFT 437
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y VL++GL K G +K+ + +++L G N T+ ++ +G K G ++A+ ++S
Sbjct: 438 YNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAV 497
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+G + D ++ + ++ GE +K L+E++
Sbjct: 498 MNGKV-DKESWELFLKKF--AGELDKGVLPLKELL 529
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 90/148 (60%)
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
N GI PN+ T N L+ LCK + ++ A ++ +I G+ PN+ TYT ++ G
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
G ++ A+ + +++L +G+ + TY+V++DGYCK G F EA +M ME + P+ VTY
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSL 286
G++IRAL K+ ++ +A + EM+ RS
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSF 327
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 135/268 (50%), Gaps = 9/268 (3%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-----GVTH 78
G + + +F + G++ ++ S ++L++ L++ N+ D+ + M + G+T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLN--VLIQ--NQRFDLVHAMFKNSKESFGITP 189
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV 138
++ + +++ LCK ++ A+ +L+E+ S ++ + + Y +++ G A +++
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVL 249
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
EM RG P+ TY L+D CK A ++ +E+ I+PN TY V++ LCK
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
+ +A+ +F ++L + + + +ID C++ DEA L KM + C+PD
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSL 286
+I L K+G +A KL E S+
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSI 397
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 143/259 (55%)
Query: 23 EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQS 82
E N+ ++ + +V G +PN+ + L+ C + KA + MV G+ D +
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
YT ++N LCK V A L+ +M ++T+ YN+L+ GLC L + + V +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
+G+ PN TY+ LL+ K D A+ L+ +I +G +PN+ +Y VL+ G CK GR
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
DA +F+++ KG+ NV +Y++++ C +G ++EA L+++M+ P VTY I+I
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 263 RALFKKGENEKAEKLLREM 281
+L G E+A ++L+EM
Sbjct: 324 NSLAFHGRTEQALQVLKEM 342
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 4/264 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I + + LV LCK GNV A + M G N V+Y++L+ G C++
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+N++ ++Q+G+ + +Y+ ++ K + DEA LL+E+ K + + YN
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G CK R+ DA L E+ +G NV++YN LL LC + A +L+ +++
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG---YNLNVRTYSVMIDGYCKEGLFD 237
P++ TY +L++ L GR + A ++ ++ + KG + + +Y+ +I CKEG D
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 238 EALILMSKMESSGCIPDAVTYGII 261
+ + +M C P+ TY I
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAI 394
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 40/312 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ L+EA KE EA + ++ +G EPN+VSY+ L+ G+C + A +F +
Sbjct: 213 TYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFREL 272
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G +V SY I++ LC +EA SLL EM + YN LI+ L R+
Sbjct: 273 PAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRT 332
Query: 132 FDAWKLVNEM---NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A +++ EM NH+ +YNP++ LCK VD + + ++ + +PN TY
Sbjct: 333 EQALQVLKEMSKGNHQ-FRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 189 TVL-----------------------------------MDGLCKVGRLKDAQEIFQDILI 213
+ + LC+ G A ++ ++
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM-ESSGCIPDAVTYGIIIRALFKKGENE 272
G++ + TYS +I G C EG+F A+ ++S M ES C P + +I L K +
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTD 511
Query: 273 KAEKLLREMVAR 284
A ++ MV +
Sbjct: 512 LAMEVFEMMVEK 523
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 83/152 (54%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
D++ + + G PNV LL LCK++ + +AI +I+ + GI P+ YT L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ LCK G + A ++ + + GY N TY+ ++ G C G +++L + ++ G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P+A TY ++ A +K+ ++A KLL E++ +
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVK 240
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 38/264 (14%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A V ++NIL+ LC +G +EA ++ A M P++V+Y+ L++ +A +
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Query: 68 FNFMVQRGVTHDVQ--SYTIIINGLCKIKMVD---------------------------- 97
M + V SY +I LCK VD
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398
Query: 98 -------EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
EA+ ++ + +K+ Y S+I LC+ +F A++L+ EM G P+
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEE-QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
TY+ L+ LC A+ ++ +EE + +P + + ++ GLCK+ R A E+F+
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 518
Query: 210 DILIKGYNLNVRTYSVMIDGYCKE 233
++ K N TY+++++G E
Sbjct: 519 MMVEKKRMPNETTYAILVEGIAHE 542
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 13/210 (6%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ LCKEG V M+ + +PN +Y+++ L + +K ++ F +
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGS---LCEHNSKVQEAFYII 411
Query: 72 V-----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
Q+ THD Y +I LC+ A+ LL EM D Y++LI GLC
Sbjct: 412 QSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 127 KLERSFD-AWKLVNEMNH-RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LE F A ++++ M P V +N ++ LCK D A+ + + + E+ PN
Sbjct: 470 -LEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPN 528
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
TY +L++G+ L+ A+E+ ++ ++
Sbjct: 529 ETTYAILVEGIAHEDELELAKEVLDELRLR 558
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +PN+ T L+ LCK RLK A + + ++ G + Y+ +++ CK G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ L+ KME G + VTY ++R L G ++ + + ++ + L
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVK-QGLEPNIVSYSSLMDGYCLVKEVNKA 64
D + T++ L+ LC EG A V ++M + + +P + ++++++ G C ++ + A
Sbjct: 454 FDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLA 513
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA 113
++F MV++ + +Y I++ G+ ++ A +L+E+ +K+I
Sbjct: 514 MEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIG 562
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 153/276 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V T+N L+ L G + + + M++ G+ P+++++S+L+D Y ++ +AK
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+N M+QR V ++ +Y +INGLC ++DEA +LN + SK + + YN+LI+G
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R D K++ M+ G+ + TYN L C++ A ++ ++ G+ P+M
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
YT+ +L+DGLC G++ A +D+ + + TY+++I G CK ++A L
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G PD +TY ++ L +K +A +L R+M
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 150/282 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ +F L++ C+ + A + M+K G EP+IV++ SL++G+C V +A
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + +V G +V Y II+ LC+ V+ A +L M I D + YNSLI L
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ +++++M GI P+VIT++ L+DV K + A ++ ++ + PN+
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L++GLC G L +A+++ ++ KG+ N TY+ +I+GYCK D+ + ++
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
M G D TY + + + G+ AEK+L MV+ +H
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 145/254 (57%), Gaps = 1/254 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I +V TF+ L++ KEG + EAK + M+++ + PNIV+Y+SL++G C+
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK + N +V +G + +Y +ING CK K VD+ +L M + DT YN+
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L G C+ + A K++ M G+ P++ T+N LLD LC + +A+ ++ +++
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ TY +++ GLCK +++DA +F + +KG + +V TY M+ G ++ L+ EA
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 241 ILMSKME-SSGCIP 253
L KM+ G +P
Sbjct: 485 ELYRKMQKEDGLMP 498
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 136/259 (52%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
+A +F M + P+IV +S L+ + + +F + G++HD+ S+T +I
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+ C+ + A S L +M + + SL++G C + R ++A LV+++ G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
PNV+ YN ++D LC+ V+ A+ ++K +++ GI+P++ TY L+ L G + I
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
D++ G + +V T+S +ID Y KEG EA ++M P+ VTY +I L
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 268 KGENEKAEKLLREMVARSL 286
G ++A+K+L +V++
Sbjct: 302 HGLLDEAKKVLNVLVSKGF 320
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 141/266 (53%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ L+ A+ K + ++F + G+ ++ S+++L+D +C ++ A M+
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMM 141
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + ++ ++NG C + EA SL++++ + + YN++ID LC+ +
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A ++ M GI P+V+TYN L+ L S + ++ + GI P++ T++ L+
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D K G+L +A++ + +++ + N N+ TY+ +I+G C GL DEA +++ + S G
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLL 278
P+AVTY +I K + K+L
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 110/228 (48%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ N A +F M + + ++ ++ + K+ + SL + I D +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+LID C+ R A + +M G P+++T+ L++ C + A++L+ +I
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G +PN+ Y ++D LC+ G++ A ++ + + G +V TY+ +I G + +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
++S M G PD +T+ +I K+G+ +A+K EM+ RS++
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 147/260 (56%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
LVE L K G ++EA N+ +V G+ PN+ Y++L+D C ++ ++A+ +F+ M + G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ + +Y+I+I+ C+ +D A S L EM + YNSLI+G CK A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+ EM ++ + P V+TY L+ C +++A+ L ++ +GI P++YT+T L+ GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
+ G ++DA ++F ++ N TY+VMI+GYC+EG +A + +M G +PD
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 256 VTYGIIIRALFKKGENEKAE 275
+Y +I L G+ +A+
Sbjct: 578 YSYRPLIHGLCLTGQASEAK 597
Score = 157 bits (397), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 35/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + V +N L+ CK G++ A+ A M+ + LEP +V+Y+SLM GYC +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+NKA +++ M +G+ + ++T +++GL + ++ +A L NEM + + + YN
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I+G C+ A++ + EM +GI P+ +Y PL+ LC + A + + +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY---------- 230
+ N YT L+ G C+ G+L++A + Q+++ +G +L++ Y V+IDG
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 231 -------------------------CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
K G F EA + M + GC+P+ VTY +I L
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 266 FKKGENEKAEKLLREM 281
K G +AE L +M
Sbjct: 728 CKAGFVNEAEVLCSKM 743
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 151/276 (54%), Gaps = 2/276 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++IL++ C+ G + A + MV GL+ ++ Y+SL++G+C +++ A+ M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ + + V +YT ++ G C +++A L +EM K I + +L+ GL +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA KL NEM + PN +TYN +++ C+ + +A +K++ E+GI P+ Y+Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+ GLC G+ +A+ +F D L KG LN Y+ ++ G+C+EG +EAL + +M G
Sbjct: 584 IHGLCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D V YG++I K + + LL+EM R L
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 149/272 (54%), Gaps = 5/272 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I + TF L+ L + G +++A +F M + ++PN V+Y+ +++GYC +
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KA + M ++G+ D SY +I+GLC EA ++ +H + ICY
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI--ALIKKIEE 178
L+ G C+ + +A + EM RG+ +++ Y L+D K H DR + L+K++ +
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK--HKDRKLFFGLLKEMHD 675
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+G++P+ YT ++D K G K+A I+ ++ +G N TY+ +I+G CK G +E
Sbjct: 676 RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
A +L SKM+ +P+ VTYG + L KGE
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDIL-TKGE 766
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 143/274 (52%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L+++LCK EA+ +F M K GL PN V+YS L+D +C +++ A MV
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G+ V Y +ING CK + A + EM +KK+ + Y SL+ G C +
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A +L +EM +GI P++ T+ LL L ++ + A+ L ++ E ++PN TY V++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+G C+ G + A E +++ KG + +Y +I G C G EA + + + C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + Y ++ ++G+ E+A + +EMV R +
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 149/276 (53%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + +N+L++ LCK+ V EA + + + L+P++V+Y +L+ G C V+E +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + M+ + + + ++ GL K ++EA +L+ + + + YN+LID LC
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K + +A L + M G+ PN +TY+ L+D+ C+ +D A++ + ++ + G++ ++Y
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
Y L++G CK G + A+ +++ K V TY+ ++ GYC +G ++AL L +M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G P T+ ++ LF+ G A KL EM
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 149/286 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I +V + ++ +LC+ ++ AK + A M G + NIV Y+ L+DG C ++
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A I + + + DV +Y ++ GLCK++ + +++EM + +S
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++GL K + +A LV + G+ PN+ YN L+D LCK A L ++ + G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++PN TY++L+D C+ G+L A +++ G L+V Y+ +I+G+CK G A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M++M + P VTY ++ KG+ KA +L EM + +
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 148/278 (53%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
EVRT + L+ L K + A +F MV G+ P++ Y+ ++ C +K++++AK++
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G ++ Y ++I+GLCK + V EA + ++ K + D + Y +L+ GLCK+
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ ++++EM P+ + L++ L K ++ A+ L+K++ + G+ PN++ Y
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+D LCK + +A+ +F + G N TYS++ID +C+ G D AL + +M
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G Y +I K G+ AE + EM+ + L
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 147/324 (45%), Gaps = 41/324 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I + ++ L+ LC G EAK + K E N + Y+ L+ G+C +
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGK 627
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A + MVQRGV D+ Y ++I+G K K + LL EMH + + D + Y S
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 121 LIDGLCK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
+ID K + +F W L M + G PN +TY +++ LCK+ V+ A L K++
Sbjct: 688 MIDAKSKTGDFKEAFGIWDL---MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 178 E-----------------------------------QGIQPNMYTYTVLMDGLCKVGRLK 202
+G+ N TY +L+ G C+ GR++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
+A E+ ++ G + + TY+ MI+ C+ +A+ L + M G PD V Y +I
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 263 RALFKKGENEKAEKLLREMVARSL 286
GE KA +L EM+ + L
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGL 888
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 130/259 (50%), Gaps = 4/259 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + +D ++ + +L++ K + K + M +GL+P+ V Y+S++D +
Sbjct: 638 MVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+A I++ M+ G + +YT +INGLCK V+EA L ++M + + + Y
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC 757
Query: 121 LIDGLCKLERSFDAWKLVNEMNH--RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+D L K E D K V N +G+ N TYN L+ C+ ++ A LI ++
Sbjct: 758 FLDILTKGE--VDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIG 815
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
G+ P+ TYT +++ LC+ +K A E++ + KG + Y+ +I G C G +
Sbjct: 816 DGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 239 ALILMSKMESSGCIPDAVT 257
A L ++M G IP+ T
Sbjct: 876 ATELRNEMLRQGLIPNNKT 894
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 67 IFNFM-VQRGVTHDVQSYTIIINGLCKIKMV-----------------DEAWSLLNEMHS 108
FNF+ + RG H S+ I+I+ L K + + +++L +
Sbjct: 90 FFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYE 149
Query: 109 KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVD 167
K ++ + ++ LI + R D + M + + P V T + LL L K H
Sbjct: 150 KCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFG 209
Query: 168 RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
A+ L + GI+P++Y YT ++ LC++ L A+E+ + G ++N+ Y+V+I
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
DG CK+ EA+ + + PD VTY ++ L K E E +++ EM+
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 21 CKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDV 80
C+ GN E+ ++ MV++G P+++ + L+ G+ ++ + KA + + + G DV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNE 140
+Y +ING CK+ +D+A +L+ M SK DT+ YN +I LC + A K++N+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 141 MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGR 200
+ P VITY L++ VD A+ L+ ++ +G++P+M+TY ++ G+CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
+ A E+ +++ +KG +V +Y++++ +G ++E LM+KM S C P+ VTY I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 261 IIRALFKKGENEKAEKLLREMVARSL 286
+I L + G+ E+A LL+ M + L
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGL 364
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 151/275 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NI++ +LC G + A V ++ +P +++Y+ L++ L V++A + + M
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ RG+ D+ +Y II G+CK MVD A+ ++ + K D I YN L+ L +
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ KL+ +M PNV+TY+ L+ LC+ ++ A+ L+K ++E+G+ P+ Y+Y L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ C+ GRL A E + ++ G ++ Y+ ++ CK G D+AL + K+ GC
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P++ +Y + AL+ G+ +A ++ EM++ +
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 150/280 (53%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L+ + +V ++NIL+ AL +G +E + + M + +PN+V+YS L+ C ++
Sbjct: 291 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 350
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
+A ++ M ++G+T D SY +I C+ +D A L M S + D + YN+++
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 410
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
LCK ++ A ++ ++ G PN +YN + L S RA+ +I ++ GI
Sbjct: 411 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 470
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P+ TY ++ LC+ G + +A E+ D+ ++ +V TY++++ G+CK ++A+ +
Sbjct: 471 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 530
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ M +GC P+ TY ++I + G +A +L ++V
Sbjct: 531 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + ++ T+N ++ +CKEG V A + + +G EP+++SY+ L+ +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ + + M +V +Y+I+I LC+ ++EA +LL M K + D Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI C+ R A + + M G P+++ YN +L LCK+ D+A+ + K+ E G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN +Y + L G A + +++ G + + TY+ MI C+EG+ DEA
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
L+ M S P VTY I++ K E A +L MV
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ ID + T+N ++ LC+EG V EA + M P++V+Y+ ++ G+C
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM 106
+ A ++ MV G + +YT++I G+ EA L N++
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 157/283 (55%), Gaps = 3/283 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ--GLEPNIVSYSSLMDGYCLVKEVNK 63
+ +V T +I+V A C+ GNV +A VFA + GLE N+V+Y+SL++GY ++ +V
Sbjct: 221 VSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ M +RGV+ +V +YT +I G CK +++EA + + KK++AD Y L+D
Sbjct: 280 MTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G C+ + DA ++ + M G+ N N L++ CKS + A + ++ + ++P
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ +TY L+DG C+ G + +A ++ + K V TY++++ GY + G F + L L
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M G D ++ ++ ALFK G+ +A KL ++AR L
Sbjct: 460 KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 151/273 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ V T+N L+ G+V+ V +M ++G+ N+V+Y+SL+ GYC + +A+
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F + ++ + D Y ++++G C+ + +A + + M + +T NSLI+G
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK + +A ++ + MN + P+ TYN L+D C++ +VD A+ L ++ ++ + P +
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTV 436
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY +L+ G ++G D +++ +L +G N + + S +++ K G F+EA+ L
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+ + G + D +T ++I L K + +A+++L
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A+ + +L++ C+ G +++A V M++ G+ N +SL++GYC ++ +A+ I
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F+ M + D +Y +++G C+ VDEA L ++M K+++ + YN L+ G +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ D L M RG+ + I+ + LL+ L K + A+ L + + +G+ + T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
V++ GLCK+ ++ +A+EI ++ I V+TY + GY K G EA + ME
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G P Y +I FK K L+ E+ AR L
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 40/324 (12%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+ +C A V+T+ L K GN+KEA V M ++G+ P I Y++L+ G + +
Sbjct: 534 IFRCKPA-VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI---------I 112
NK D+ + RG+T V +Y +I G C I M+D+A++ EM K I I
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 113 ADTICYNSLIDGLCKLER---SFD--------------------------AWKLVNEMNH 143
A+++ ID C L + FD A + N
Sbjct: 653 ANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPK 712
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI-EEQGIQPNMYTYTVLMDGLCKVGRLK 202
+ + PN I YN + LCK+ ++ A L + P+ YTYT+L+ G G +
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
A + ++ +KG N+ TY+ +I G CK G D A L+ K+ G P+A+TY +I
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 263 RALFKKGENEKAEKLLREMVARSL 286
L K G +A +L +M+ + L
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ CK G + EA+ +F+ M L+P+ +Y++L+DGYC V++A + + M Q
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
+ V V +Y I++ G +I + SL M + + AD I ++L++ L KL +
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A KL + RG+ + IT N ++ LCK V+ A ++ + +P + TY L
Sbjct: 490 AMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSH 549
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
G KVG LK+A + + + KG + Y+ +I G K ++ L+ ++ + G P
Sbjct: 550 GYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP 609
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
TYG +I G +KA EM+ + +
Sbjct: 610 TVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 138/271 (50%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N LV+ C+ G V EA + M ++ + P +++Y+ L+ GY + + ++ M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++RGV D S + ++ L K+ +EA L + ++ ++ DTI N +I GLCK+E+
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A ++++ +N P V TY L K ++ A A+ + +E +GI P + Y L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ G K L ++ ++ +G V TY +I G+C G+ D+A +M G
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ I +LF+ + ++A LL+++V
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 149/311 (47%), Gaps = 36/311 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+++++ ++G VK A +VF M G P+++S +SL+ E A +++ M+
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLERS 131
V+ DV + +I++N C+ VD+A E S + + + YNSLI+G +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+++ M+ RG+ NV+TY L+ CK ++ A + + ++E+ + + + Y VL
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 192 MDGLCKVGRLKDAQEIFQDI--------------LIKGY--------------------- 216
MDG C+ G+++DA + ++ LI GY
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ TY+ ++DGYC+ G DEAL L +M +P +TY I+++ + G
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 277 LLREMVARSLH 287
L + M+ R ++
Sbjct: 458 LWKMMLKRGVN 468
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 149/312 (47%), Gaps = 38/312 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+NIL++ + G + +++ +M+K+G+ + +S S+L++ + + N+A ++
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
++ RG+ D + ++I+GLCK++ V+EA +L+ ++ + Y +L G K+
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A+ + M +GI P + YN L+ K H+++ L+ ++ +G+ P + TY
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK---- 245
L+ G C +G + A +++ KG LNV S + + + DEA +L+ K
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 246 -------------MESSGC---------------------IPDAVTYGIIIRALFKKGEN 271
+E+S +P+ + Y + I L K G+
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKL 735
Query: 272 EKAEKLLREMVA 283
E A KL ++++
Sbjct: 736 EDARKLFSDLLS 747
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 39/325 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++A+ + + L+EAL K G+ EA ++ ++ +GL + ++ + ++ G C +++
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
VN+AK+I + + VQ+Y + +G K+ + EA+++ M K I YN+
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNT 581
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G K LV E+ RG+ P V TY L+ C +D+A A ++ E+G
Sbjct: 582 LISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG 641
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQ-----DILIKGYN------------------ 217
I N+ + + + L ++ ++ +A + Q D+L+ GY
Sbjct: 642 ITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQK 701
Query: 218 ---------------LNVRTYSVMIDGYCKEGLFDEALILMSKMESSG-CIPDAVTYGII 261
N Y+V I G CK G ++A L S + SS IPD TY I+
Sbjct: 702 IAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTIL 761
Query: 262 IRALFKKGENEKAEKLLREMVARSL 286
I G+ KA L EM + +
Sbjct: 762 IHGCAIAGDINKAFTLRDEMALKGI 786
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ IL+ G++ +A + M +G+ PNIV+Y++L+ G C + V++A+ + + +
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKL 816
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
Q+G+T + +Y +I+GL K V EA L +M K ++
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ I + T+N L++ LCK GNV A+ + + ++G+ PN ++Y++L+DG
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 61 VNKAKDIFNFMVQRGV 76
V +A + M+++G+
Sbjct: 841 VAEAMRLKEKMIEKGL 856
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 154/279 (55%), Gaps = 8/279 (2%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D V+ +N +++ L E ++ V+ M + G EPN+ +Y+ L+ C +V+ AK
Sbjct: 143 DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKK 202
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M +G D SYT +I+ +C++ +V E L +++ YN+LI+GLC
Sbjct: 203 LLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL-----AERFEPVVSVYNALINGLC 257
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K A++L+ EM +GI PNVI+Y+ L++VLC S ++ A + + ++ ++G PN+Y
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL--NVRTYSVMIDGYCKEGLFDEALILMS 244
T + L+ G G DA +++ +I+G+ L NV Y+ ++ G+C G +A+ + S
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQ-MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
ME GC P+ TYG +I K+G + A + +M+
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 154/271 (56%), Gaps = 2/271 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ T + LV+ G +A +++ M++ GL+PN+V+Y++L+ G+C + KA +F
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M + G + ++++Y +ING K +D A + N+M + + + Y ++++ LC+
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYT 187
+ +A L+ M+ P+V T+N + LC + +D A + +++E+Q PN+ T
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVT 495
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y L+DGL K R+++A + ++I ++G + TY+ ++ G C GL AL L+ KM
Sbjct: 496 YNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMM 555
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
G PD +T +II A K+G+ E+A ++L
Sbjct: 556 VDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 31/307 (10%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC---LVKEVN 62
+ V T+N+L++ALCK V AK + M +G P+ VSY++++ C LVKE
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 63 K---------------------------AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
+ A ++ MV++G++ +V SY+ +IN LC
Sbjct: 237 ELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYN 154
++ A+S L +M + + +SL+ G +FDA L N+M G+ PNV+ YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+ C ++ +A+++ +EE G PN+ TY L++G K G L A I+ +L
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G NV Y+ M++ C+ F EA L+ M C P T+ I+ L G + A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 275 EKLLREM 281
EK+ R+M
Sbjct: 477 EKVFRQM 483
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 7/286 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ V +N LV+ C GN+ +A +VF+ M + G PNI +Y SL++G+ ++ A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I+N M+ G +V YT ++ LC+ EA SL+ M + +N+ I GL
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 126 CKLERSFDAWKLVNEM--NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
C R A K+ +M HR PPN++TYN LLD L K++ ++ A L ++I +G++
Sbjct: 468 CDAGRLDWAEKVFRQMEQQHR-CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ TY L+ G C G A ++ +++ G + + T +++I YCK+G + A ++
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 244 SKMESSG---CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ S G PD ++Y +I L + E LL M++ +
Sbjct: 587 D-LVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF +++ L +G V + + M QG + + S++ Y V +A ++F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G V+ Y +++ L + + + +M + YN L+ LCK +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A KL+ EM+++G P+ ++Y ++ +C+ V L ++ E P + Y L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GLCK K A E+ ++++ KG + NV +YS +I+ C G + A +++M GC
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
P+ T +++ F +G A L +M+
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 89/170 (52%), Gaps = 5/170 (2%)
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
YN ++D L R + + +M G PNV TYN LL LCK++ VD A L+ ++
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 208
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+G P+ +YT ++ +C+VG +K+ +E L + + V Y+ +I+G CKE +
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVSVYNALINGLCKEHDYK 263
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
A LM +M G P+ ++Y +I L G+ E A L +M+ R H
Sbjct: 264 GAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + +VEALC+ KEA+++ +M K+ P++ ++++ + G C ++ A+ +F
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 70 FMVQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M Q+ ++ +Y +++GL K ++EA+ L E+ + + + YN+L+ G C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE--EQGIQPNMY 186
A +LV +M G P+ IT N ++ CK +RA ++ + + +P++
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
+YT ++ GLC+ +D + + ++ G ++ T+SV+I+ +
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 158/278 (56%), Gaps = 1/278 (0%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D T++ +V+ LC++ +++A + + P++VS++S+M GYC + V+ AK
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
F +++ G+ V S+ I+INGLC + + EA L ++M+ + D++ YN L G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN-M 185
L AW+++ +M +G+ P+VITY LL C+ ++D + L+K + +G + N +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+V++ GLCK GR+ +A +F + G + ++ YS++I G CK G FD AL L +
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M +P++ T+G ++ L +KG +A LL +++
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 153/278 (55%), Gaps = 1/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V +FN ++ CK G V AK+ F ++K GL P++ S++ L++G CLV + +A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + M + GV D +Y I+ G + M+ AW ++ +M K + D I Y L+ G
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 126 CKLERSFDAWKLVNEMNHRGIPPN-VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C+L L+ +M RG N +I + +L LCK+ +D A++L +++ G+ P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y++++ GLCK+G+ A ++ ++ K N RT+ ++ G C++G+ EA L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ SSG D V Y I+I K G E+A +L + ++
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 154/283 (54%), Gaps = 1/283 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPN-IVSYSSLMDGYCLVK 59
M+ + + +V T+ IL+ C+ GN+ + M+ +G E N I+ S ++ G C
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++A +FN M G++ D+ +Y+I+I+GLCK+ D A L +EM K+I+ ++ +
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+L+ GLC+ +A L++ + G +++ YN ++D KS ++ A+ L K + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
GI P++ T+ L+ G CK + +A++I I + G +V +Y+ ++D Y G
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
L +M++ G P VTY +I + L + ++E +LRE +
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 162/322 (50%), Gaps = 37/322 (11%)
Query: 2 VLQC-IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
VL+C + V + NIL+ LC G++ EA + + M K G+EP+ V+Y+ L G+ L+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIII--------------------------------- 87
++ A ++ M+ +G++ DV +YTI++
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 88 ---NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
+GLCK +DEA SL N+M + + D + Y+ +I GLCKL + A L +EM +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
I PN T+ LL LC+ + A +L+ + G ++ Y +++DG K G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
E+F+ ++ G +V T++ +I GYCK EA ++ ++ G P V+Y ++ A
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 265 LFKKGENEKAEKLLREMVARSL 286
G + ++L REM A +
Sbjct: 548 YANCGNTKSIDELRREMKAEGI 569
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V TFN L+ CK N+ EA+ + V+ GL P++VSY++LMD Y
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKI------------KMVDEAWSLLNEMHSKKIIA 113
++ M G+ +Y++I GLC+ ++ ++ L +M S+ I
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D I YN++I LC+++ A+ + M R + + TYN L+D LC ++ +A + I
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
++EQ + + + YT L+ C G + A ++F +L +G+N+++R YS +I+ C+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 234 GLFD 237
L +
Sbjct: 739 HLMN 742
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 20/293 (6%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
RT L+ LC++G + EA+++ ++ G +IV Y+ ++DGY + +A ++F
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL--CKL 128
+++ G+T V ++ +I G CK + + EA +L+ + + + Y +L+D C
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS------HHVDRAIAL------IKKI 176
+S D +L EM GIPP +TY+ + LC+ +HV R ++ +
Sbjct: 554 TKSID--ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR--TYSVMIDGYCKEG 234
E +GI P+ TY ++ LC+V L A +F +I+ K NL+ TY+++ID C G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDSLCVYG 669
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+A + ++ Y +I+A KG+ E A KL +++ R +
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 137/271 (50%), Gaps = 18/271 (6%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+NI+++ K G ++EA +F V+++ G+ P++ +++SL+ GYC + + +A+ I + +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 73 QRGVTHDVQSYTIIINGLCK---IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-- 127
G+ V SYT +++ K +DE L EM ++ I + Y+ + GLC+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 128 ---------LERSFDAWKL-VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
ER F+ K + +M GIPP+ ITYN ++ LC+ H+ A ++ ++
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ + + TY +L+D LC G ++ A + + +L+ Y+ +I +C +G +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKK 268
A+ L ++ G Y +I L ++
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+++MVD++ +L +M + + T YNS++ + ++ +D +K + + N
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY+ ++D LC+ ++ A+ ++ E + I P++ ++ +M G CK+G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
L G +V +++++I+G C G EAL L S M G PD+VTY I+ + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 272 EKAEKLLREMVARSL 286
A +++R+M+ + L
Sbjct: 309 SGAWEVIRDMLDKGL 323
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 116/229 (50%), Gaps = 7/229 (3%)
Query: 58 VKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
++ V+ + I M + + QSY + L + D+ W + E+ K +
Sbjct: 137 LRMVDDSLYILKKMKDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDK----NEHT 189
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
Y++++DGLC+ ++ DA + + I P+V+++N ++ CK VD A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ G+ P++Y++ +L++GLC VG + +A E+ D+ G + TY+++ G+ G+
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
A ++ M G PD +TY I++ + G + LL++M++R
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 158/278 (56%), Gaps = 1/278 (0%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D T++ +V+ LC++ +++A + + P++VS++S+M GYC + V+ AK
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKS 243
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
F +++ G+ V S+ I+INGLC + + EA L ++M+ + D++ YN L G
Sbjct: 244 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN-M 185
L AW+++ +M +G+ P+VITY LL C+ ++D + L+K + +G + N +
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSI 363
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+V++ GLCK GR+ +A +F + G + ++ YS++I G CK G FD AL L +
Sbjct: 364 IPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDE 423
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M +P++ T+G ++ L +KG +A LL +++
Sbjct: 424 MCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLIS 461
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 153/278 (55%), Gaps = 1/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V +FN ++ CK G V AK+ F ++K GL P++ S++ L++G CLV + +A
Sbjct: 218 IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEAL 277
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + M + GV D +Y I+ G + M+ AW ++ +M K + D I Y L+ G
Sbjct: 278 ELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 126 CKLERSFDAWKLVNEMNHRGIPPN-VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C+L L+ +M RG N +I + +L LCK+ +D A++L +++ G+ P+
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPD 397
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ Y++++ GLCK+G+ A ++ ++ K N RT+ ++ G C++G+ EA L+
Sbjct: 398 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 457
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ SSG D V Y I+I K G E+A +L + ++
Sbjct: 458 SLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 154/283 (54%), Gaps = 1/283 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPN-IVSYSSLMDGYCLVK 59
M+ + + +V T+ IL+ C+ GN+ + M+ +G E N I+ S ++ G C
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++A +FN M G++ D+ +Y+I+I+GLCK+ D A L +EM K+I+ ++ +
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+L+ GLC+ +A L++ + G +++ YN ++D KS ++ A+ L K + E
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
GI P++ T+ L+ G CK + +A++I I + G +V +Y+ ++D Y G
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
L +M++ G P VTY +I + L + ++E +LRE +
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 162/322 (50%), Gaps = 37/322 (11%)
Query: 2 VLQC-IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
VL+C + V + NIL+ LC G++ EA + + M K G+EP+ V+Y+ L G+ L+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIII--------------------------------- 87
++ A ++ M+ +G++ DV +YTI++
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 88 ---NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
+GLCK +DEA SL N+M + + D + Y+ +I GLCKL + A L +EM +
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
I PN T+ LL LC+ + A +L+ + G ++ Y +++DG K G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
E+F+ ++ G +V T++ +I GYCK EA ++ ++ G P V+Y ++ A
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 265 LFKKGENEKAEKLLREMVARSL 286
G + ++L REM A +
Sbjct: 548 YANCGNTKSIDELRREMKAEGI 569
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V TFN L+ CK N+ EA+ + V+ GL P++VSY++LMD Y
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKI------------KMVDEAWSLLNEMHSKKIIA 113
++ M G+ +Y++I GLC+ ++ ++ L +M S+ I
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D I YN++I LC+++ A+ + M R + + TYN L+D LC ++ +A + I
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
++EQ + + + YT L+ C G + A ++F +L +G+N+++R YS +I+ C+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 234 GLFD 237
L +
Sbjct: 739 HLMN 742
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 20/293 (6%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
RT L+ LC++G + EA+++ ++ G +IV Y+ ++DGY + +A ++F
Sbjct: 434 RTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKV 493
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL--CKL 128
+++ G+T V ++ +I G CK + + EA +L+ + + + Y +L+D C
Sbjct: 494 VIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGN 553
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS------HHVDRAIAL------IKKI 176
+S D +L EM GIPP +TY+ + LC+ +HV R ++ +
Sbjct: 554 TKSID--ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR--TYSVMIDGYCKEG 234
E +GI P+ TY ++ LC+V L A +F +I+ K NL+ TY+++ID C G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAF-VFLEIM-KSRNLDASSATYNILIDSLCVYG 669
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+A + ++ Y +I+A KG+ E A KL +++ R +
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 722
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 137/271 (50%), Gaps = 18/271 (6%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+NI+++ K G ++EA +F V+++ G+ P++ +++SL+ GYC + + +A+ I + +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 73 QRGVTHDVQSYTIIINGLCK---IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-- 127
G+ V SYT +++ K +DE L EM ++ I + Y+ + GLC+
Sbjct: 531 LYGLAPSVVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRGW 587
Query: 128 ---------LERSFDAWKL-VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
ER F+ K + +M GIPP+ ITYN ++ LC+ H+ A ++ ++
Sbjct: 588 KHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMK 647
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ + + TY +L+D LC G ++ A + + +L+ Y+ +I +C +G +
Sbjct: 648 SRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPE 707
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKK 268
A+ L ++ G Y +I L ++
Sbjct: 708 MAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+++MVD++ +L +M + + T YNS++ + ++ +D +K + + N
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEH------- 188
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY+ ++D LC+ ++ A+ ++ E + I P++ ++ +M G CK+G + A+ F +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
L G +V +++++I+G C G EAL L S M G PD+VTY I+ + G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 272 EKAEKLLREMVARSL 286
A +++R+M+ + L
Sbjct: 309 SGAWEVIRDMLDKGL 323
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 116/229 (50%), Gaps = 7/229 (3%)
Query: 58 VKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
++ V+ + I M + + QSY + L + D+ W + E+ K +
Sbjct: 137 LRMVDDSLYILKKMKDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDK----NEHT 189
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
Y++++DGLC+ ++ DA + + I P+V+++N ++ CK VD A + +
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ G+ P++Y++ +L++GLC VG + +A E+ D+ G + TY+++ G+ G+
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
A ++ M G PD +TY I++ + G + LL++M++R
Sbjct: 310 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGF 358
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 155/276 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+++V + L+ C++GN+K A +F + ++GL P+ +Y +L+DG C V E+ A+
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N M +GV + +I+G C+ MVDEA + + M K AD N++
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+L+R +A + + M G+ + ++Y L+DV CK +V+ A L ++ +G+QPN
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY V++ CK G++K+A+++ ++ G + + TY+ +I G C DEA+ L S+
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M G ++VTY ++I L K G++++A L EM
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 155/284 (54%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
++ I E T+N ++ A K+ + + V VM K G+ N V+Y+ LM+ +++
Sbjct: 252 VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMS 311
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
A+ +F+ M +RG+ DV YT +I+ C+ + A+ L +E+ K + + Y +LI
Sbjct: 312 DAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
DG+CK+ A L+NEM +G+ + +N L+D C+ VD A + +E++G Q
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
+++T + ++ R +A++ ++ G L+ +Y+ +ID YCKEG +EA L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+M S G P+A+TY ++I A K+G+ ++A KL M A +
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 150/275 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+E K G + +A+ +F M ++G+E ++ Y+SL+ C + +A +F+ +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G++ +Y +I+G+CK+ + A L+NEM SK + + +N+LIDG C+
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMV 415
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + + M +G +V T N + + D A + ++ E G++ + +YT L
Sbjct: 416 DEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D CK G +++A+ +F ++ KG N TY+VMI YCK+G EA L + ME++G
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD+ TY +I ++A +L EM + L
Sbjct: 536 DPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 141/282 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + + R+ + + A K + +F MV G++ + S + +++G C E
Sbjct: 180 MVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGE 239
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V K+K + +G+ + +Y IIN K + +L M ++ + + Y
Sbjct: 240 VEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++ K + DA KL +EM RGI +V Y L+ C+ ++ RA L ++ E+G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ P+ YTY L+DG+CKVG + A+ + ++ KG N+ ++ +IDGYC++G+ DEA
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
++ ME G D T I + ++A++ L M+
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 114/221 (51%)
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+F++MV++G++ D +S + + K + +D + M + +++GLC
Sbjct: 176 VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLC 235
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ + KL+ E + +GI P TYN +++ K ++K +++ G+ N
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TYT+LM+ K G++ DA+++F ++ +G +V Y+ +I C++G A +L ++
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
G P + TYG +I + K GE AE L+ EM ++ ++
Sbjct: 356 TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNI--------------------------- 45
FN L++ C++G V EA ++ VM ++G + ++
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 46 --------VSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
VSY++L+D YC V +AK +F M +GV + +Y ++I CK +
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
EA L M + + D+ Y SLI G C + +A +L +EM +G+ N +TY ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
L K+ D A L +++ +G + YT L+ +
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 167/320 (52%), Gaps = 43/320 (13%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V ++ +L+ K GN+++A ++F MV++GL PN++ Y+ L+ G+C E+ KAK
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + M +G+ + +Y II+G CK + EA+ L +EM K ++ D+ Y +L+DG
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 126 CKL---ERS-----------------FDA---W---------------KLVNEMNHRGIP 147
C+L ER+ F+A W +L++ R
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
PN +TYN ++D LCK +++ A L +++ + P + TYT L++G K+GR + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 208 FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI-----II 262
F + + G + YSV+I+ + KEG+ +AL+L+ +M + + D I ++
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 263 RALFKKGENEKAEKLLREMV 282
K GE E AEK++ MV
Sbjct: 923 SGFAKVGEMEVAEKVMENMV 942
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 145/276 (52%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +V+ +C G++ A N+ M+ G PN+V Y++L+ + A + M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ D+ Y +I GL K K +DEA S L EM + + Y + I G +
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A K V EM G+ PN + L++ CK V A + + + +QGI + TYTVL
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M+GL K ++ DA+EIF+++ KG +V +Y V+I+G+ K G +A + +M G
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
P+ + Y +++ + GE EKA++LL EM + LH
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 165/323 (51%), Gaps = 38/323 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV Q I + +T+ +L+ L K V +A+ +F M +G+ P++ SY L++G+ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ KA IF+ MV+ G+T +V Y +++ G C+ +++A LL+EM K + + + Y +
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI---------- 170
+IDG CK +A++L +EM +G+ P+ Y L+D C+ + V+RAI
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 171 --------ALIKKIEEQGI--------------------QPNMYTYTVLMDGLCKVGRLK 202
ALI + + G +PN TY +++D LCK G L+
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
A+E+F + V TY+ +++GY K G E + + ++G PD + Y +II
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 263 RALFKKGENEKAEKLLREMVARS 285
A K+G KA L+ +M A++
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKN 905
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 143/271 (52%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q I ++ +N L+ L K + EA++ MV+ GL+PN +Y + + GY E
Sbjct: 481 QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFAS 540
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A M + GV + T +IN CK V EA S M + I+ D Y L++
Sbjct: 541 ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
GL K ++ DA ++ EM +GI P+V +Y L++ K ++ +A ++ ++ E+G+ P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N+ Y +L+ G C+ G ++ A+E+ ++ +KG + N TY +IDGYCK G EA L
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+M+ G +PD+ Y ++ + + E+A
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 149/286 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I+ + ++ + + KEG +++AK +F M+ GL P +Y+SL++GYC K
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V + ++ M +R + +Y ++ G+C +D A++++ EM + + + Y +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI + R DA +++ EM +GI P++ YN L+ L K+ +D A + + ++ E G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++PN +TY + G + A + +++ G N + +I+ YCK+G EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M G + DA TY +++ LFK + + AE++ REM + +
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 21/307 (6%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVF---------------------AVMVKQ 39
MV + + +V+T+++L+ A C+ GNV+ K+V M+ +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
GL P +Y L+DG C +K + AK + M GV+ D +Y+++I+GL K + D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
L++EM S I Y+ I + K A L + M G+ P Y L++
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
C+ +V + L+ +++++ I + YTY ++ G+C G L A I ++++ G N
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
V Y+ +I + + F +A+ ++ +M+ G PD Y +I L K ++A L
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 280 EMVARSL 286
EMV L
Sbjct: 512 EMVENGL 518
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ ++ +F+ L LC G+ ++A +V M+++ P +SS++ C + V K+ D
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR--CSQEFVGKSDD 150
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
GV + I+ +G ++EA + + +++ L+D L
Sbjct: 151 --------GVL-----FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ R W + M R + +V TY+ L+ C++ +V ++ K E++
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE-----FR 252
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T T+ +DG A ++ + ++ KG TY V+IDG CK ++A L+ +M
Sbjct: 253 TATLNVDG---------ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+S G D TY ++I L K + A+ L+ EMV+ ++
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGIN 344
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 164/313 (52%), Gaps = 32/313 (10%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + V TFNI++ LCKEG +K+AK +M G++P IV+Y++L+ G+ L + A+
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLC-------------KIKMVDE-------------- 98
I + M +G D+Q+Y I++ +C +I +V +
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 99 -----AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITY 153
A++ +EM + ++ YN+LI GL + A L+ E+ +GI + +TY
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 154 NPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
N L++ C+ +A AL ++ GIQP +TYT L+ LC+ + ++A E+F+ ++
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
KG ++ + ++DG+C G D A L+ +M+ PD VTY ++R L +G+ E+
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 274 AEKLLREMVARSL 286
A +L+ EM R +
Sbjct: 521 ARELMGEMKRRGI 533
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 154/270 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++NIL+ G+++ A MVKQG+ P +Y++L+ G + ++ A+ + +
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ D +Y I+ING C+ +A++L +EM + I Y SLI LC+ ++
Sbjct: 389 REKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKT 448
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L ++ +G+ P+++ N L+D C ++DRA +L+K+++ I P+ TY L
Sbjct: 449 READELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL 508
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M GLC G+ ++A+E+ ++ +G + +Y+ +I GY K+G A ++ +M S G
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P +TY +++ L K E E AE+LLREM
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREM 598
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 139/265 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV Q + T+N L+ L E ++ A+ + + ++G+ + V+Y+ L++GYC +
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGD 412
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
KA + + M+ G+ +YT +I LC+ EA L ++ K + D + N+
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+DG C + A+ L+ EM+ I P+ +TYN L+ LC + A L+ +++ +G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+P+ +Y L+ G K G K A + ++L G+N + TY+ ++ G K + A
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 241 ILMSKMESSGCIPDAVTYGIIIRAL 265
L+ +M+S G +P+ ++ +I A+
Sbjct: 593 ELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 140/306 (45%), Gaps = 32/306 (10%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F++LV C+ V EA F +M ++G P + + ++ + + A + M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ + +V ++ I+IN LCK + +A L M I + YN+L+ G R
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE--------------- 177
A +++EM +G P++ TYNP+L +C + +K+I
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 178 -----------------EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
+QG+ P YTY L+ GL +++ A+ + ++I KG L+
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 221 RTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
TY+++I+GYC+ G +A L +M + G P TY +I L +K + +A++L +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 281 MVARSL 286
+V + +
Sbjct: 458 VVGKGM 463
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 11/238 (4%)
Query: 57 LVKEV-----NKAKDIFNFMV---QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS 108
L+KEV N +++F+ +V R T + +++ C+++MVDEA M
Sbjct: 124 LLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKE 183
Query: 109 KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
K T N ++ L +L R +AW +M I NV T+N +++VLCK + +
Sbjct: 184 KGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKK 243
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
A + +E GI+P + TY L+ G GR++ A+ I ++ KG+ +++TY+ ++
Sbjct: 244 AKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILS 303
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
C EG E L +M+ G +PD+V+Y I+IR G+ E A EMV + +
Sbjct: 304 WMCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 71/129 (55%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I+ + T+N L+ LC EG +EA+ + M ++G++P+ +SY++L+ GY +
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 552
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
A + + M+ G + +Y ++ GL K + + A LL EM S+ I+ + + S
Sbjct: 553 TKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCS 612
Query: 121 LIDGLCKLE 129
+I+ + L+
Sbjct: 613 VIEAMSNLD 621
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 139/244 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I A+V +V+ LCK+GN A+N+F M ++G+ PN+++Y+ ++D +C + A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M+++ + D+ +++ +IN K + V EA + EM I TI YNS+IDG
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK +R DA ++++ M +G P+V+T++ L++ CK+ VD + + ++ +GI N
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ G C+VG L AQ++ +++ G + T+ M+ G C + +A ++
Sbjct: 186 VTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILED 245
Query: 246 MESS 249
++ S
Sbjct: 246 LQKS 249
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 133/252 (52%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
M + ++ ++V ++++D C A+++F M ++G+ +V +Y +I+ C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
+A LL M K+I D + +++LI+ K + +A ++ EM I P ITYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
++D CK VD A ++ + +G P++ T++ L++G CK R+ + EIF ++ +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
N TY+ +I G+C+ G D A L+++M S G PD +T+ ++ L K E KA
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 276 KLLREMVARSLH 287
+L ++ H
Sbjct: 241 AILEDLQKSEDH 252
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 108/179 (60%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ ++ TF+ L+ A KE V EA+ ++ M++ + P ++Y+S++DG+C
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ AK + + M +G + DV +++ +ING CK K VD + EMH + I+A+T+ Y +
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI G C++ A L+NEM G+ P+ IT++ +L LC + +A A+++ +++
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 60/102 (58%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF+ L+ CK V +F M ++G+ N V+Y++L+ G+C V +++ A+D+
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
N M+ GV D ++ ++ GLC K + +A+++L ++ +
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 154 bits (389), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 145/264 (54%), Gaps = 1/264 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ +FN +++ LCK V++A +F + + + V+Y+ +++G+CL+K KA ++
Sbjct: 160 DLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
MV+RG+ ++ +Y ++ G + + AW EM + D + Y +++ G
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A + +EM G+ P+V TYN ++ VLCK +V+ A+ + +++ +G +PN+ TY
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
VL+ GL G +E+ Q + +G N +TY++MI Y + ++AL L KM S
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 249 SGCIPDAVTYGIIIRALFKKGENE 272
C+P+ TY I+I +F + +E
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSE 422
Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 1/276 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +TF I+ E G +A +F M + G ++ S+++++D C K V KA
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F + R + D +Y +I+NG C IK +A +L EM + I + YN+++ G
Sbjct: 182 ELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ + AW+ EM R +V+TY ++ + + RA + ++ +G+ P++
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY ++ LCK +++A +F++++ +GY NV TY+V+I G G F LM +
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
ME+ GC P+ TY ++IR + E EKA L +M
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 106/203 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + I+ + T+N +++ + G ++ A F M K+ E ++V+Y++++ G+ + E
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+++F+ M++ GV V +Y +I LCK V+ A + EM + + YN
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI GL +L+ M + G PN TYN ++ + V++A+ L +K+
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 IQPNMYTYTVLMDGLCKVGRLKD 203
PN+ TY +L+ G+ R +D
Sbjct: 401 CLPNLDTYNILISGMFVRKRSED 423
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 3/222 (1%)
Query: 63 KAKDIFNFM--VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
KA F+F+ R HD S+ + I+ ++ + WSL++ M S +I +
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+ + + A KL M+ G ++ ++N +LDVLCKS V++A L + + +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR- 190
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ TY V+++G C + R A E+ ++++ +G N N+ TY+ M+ G+ + G A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+M+ C D VTY ++ GE ++A + EM+
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMI 292
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 90/178 (50%), Gaps = 1/178 (0%)
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
H ++ + D ++ ID +L W L++ M I P+ T+ + + +
Sbjct: 83 HHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKP 142
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
D+A+ L + E G ++ ++ ++D LCK R++ A E+F+ + + ++++ TY+V+
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201
Query: 227 IDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
++G+C +AL ++ +M G P+ TY +++ F+ G+ A + EM R
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + V T+N+L+ L G + + M +G EPN +Y+ ++ Y E
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSE 385
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
V KA +F M ++ +Y I+I+G+ K ++ N+ +K+I+
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 151/264 (57%), Gaps = 1/264 (0%)
Query: 20 LCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHD 79
CK+G V A + +M ++G+EPN+V Y+++M +C +K ++ A+ IF+ M+++G+ +
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 80 VQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV- 138
+Y+I+I+G K K AW ++N+M++ A+ + YN++I+GLCK+ ++ A +++
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
N + + + +YN ++D K D A+ +++ E G PN+ T+T L++G CK
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
R+ A E+ ++ L++ Y +IDG+CK+ A L S++ G +P+ Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 259 GIIIRALFKKGENEKAEKLLREMV 282
+I G+ + A L ++MV
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMV 722
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 36/312 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V +N ++ A C+ N+ A+++F+ M+++GLEPN +YS L+DG+ K+ A
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL-NEMHSKKIIADTICYNSLIDG 124
D+ N M + Y IINGLCK+ +A +L N + K+ YNS+IDG
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI-------------- 170
K+ + A + EM+ G PNV+T+ L++ CKS+ +D A+
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 171 ---------------------ALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
L ++ E G+ PN+ Y L+ G +G++ A ++++
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ G + ++ TY+ MIDG K+G + A L S++ G +PD + + +++ L KKG
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Query: 270 ENEKAEKLLREM 281
+ KA K+L EM
Sbjct: 780 QFLKASKMLEEM 791
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 149/275 (54%), Gaps = 1/275 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQG-LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+N ++ LCK G +AK + ++K+ + SY+S++DG+ V + + A + + M
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G + +V ++T +ING CK +D A + +EM S ++ D Y +LIDG CK
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A+ L +E+ G+ PNV YN L+ +D AI L KK+ GI +++TYT +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DGL K G + A +++ ++L G + + V+++G K+G F +A ++ +M+
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ + Y +I ++G +A +L EM+ + +
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A T+ ++ A KEGN++EA V MV G+ ++++ +SL++GYC E+ KA
Sbjct: 306 VPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKAL 365
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+FN M + G+ D +++++ CK +++A M S +I ++ +++I G
Sbjct: 366 DLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC 425
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K E A ++ N+ I + N + + CK VD A + +K +E++GI+PN+
Sbjct: 426 LKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y +M C++ + A+ IF ++L KG N TYS++IDG+ K A ++++
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M +S + V Y II L K G+ KA+++L+ ++
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 136/257 (52%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N +++ K G+ A + M + G PN+V+++SL++G+C ++ A ++ + M
Sbjct: 592 SYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM 651
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ D+ +Y +I+G CK + A++L +E+ ++ + YNSLI G L +
Sbjct: 652 KSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKM 711
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L +M + GI ++ TY ++D L K +++ A L ++ + GI P+ + VL
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GL K G+ A ++ +++ K NV YS +I G+ +EG +EA L +M G
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Query: 252 IPDAVTYGIIIRALFKK 268
+ D + +++ +K
Sbjct: 832 VHDDTVFNLLVSGRVEK 848
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 35/321 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MVL + + T +L+ A +E +EA +F ++ +G EP+ + +S + C +
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 61 VNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ A D+ M + GV ++YT +I K ++EA +++EM I I
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
SL++G CK A L N M G+ P+ + ++ +++ CK+ +++AI +++
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 180 GIQPNMYTYTVLMDG----------------------------------LCKVGRLKDAQ 205
I P+ ++ G CK G++ A
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ + KG NV Y+ M+ +C+ D A + S+M G P+ TY I+I
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 266 FKKGENEKAEKLLREMVARSL 286
FK + + A ++ +M A +
Sbjct: 530 FKNKDEQNAWDVINQMNASNF 550
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 107/186 (57%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ + L++ CK+ ++K A +F+ + + GL PN+ Y+SL+ G+ + +++ A D++
Sbjct: 659 DLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
MV G++ D+ +YT +I+GL K ++ A L +E+ I+ D I + L++GL K
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK 778
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A K++ EM + + PNV+ Y+ ++ + +++ A L ++ E+GI + +
Sbjct: 779 GQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVF 838
Query: 189 TVLMDG 194
+L+ G
Sbjct: 839 NLLVSG 844
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
G E +++ L++ Y K ++ A D F MV R V V +++ L + ++DEA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
+ N+M + D + L+ + + +A K+ + RG P+ + ++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 160 LCKSHHVDRAIALIKKIEEQ-GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
CK+ + A+ L++++ + G+ + TYT ++ K G +++A + +++ G +
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+V + +++GYCK +AL L ++ME G PD V + +++ K E EKA
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 129/271 (47%), Gaps = 1/271 (0%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R FN L+ A + + A + F +MV + + P + ++++ +++AK+I+N
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
MV GV D + +++ + + +EA + + S+ D + ++ + CK
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 131 SFDAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A L+ EM + G+P + TY ++ K +++ A+ ++ ++ GI ++ T
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L++G CK L A ++F + +G + +SVM++ +CK ++A+ +M+S
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
P +V +I+ K E A ++ +
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 112/220 (50%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TF L+ CK + A + M L+ ++ +Y +L+DG+C ++ A +F+
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ + G+ +V Y +I+G + +D A L +M + I D Y ++IDGL K
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A L +E+ GI P+ I + L++ L K +A ++++++++ + PN+ Y+
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
++ G + G L +A + ++L KG + +++++ G
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 1/288 (0%)
Query: 1 MVLQCIDAE-VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK 59
+VL C A V TF L+ CK G + A ++F VM ++G+EP++++YS+L+DGY
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ +F+ + +GV DV ++ I+ K + A + M + I + + Y
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI GLC+ R ++A+ + ++ RG+ P+++TY+ L+D CK ++ AL + + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G P++ Y VL+DGL K G + A +L + LNV ++ +IDG+C+ FDEA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L + M G PD T+ ++R +G E+A L M L
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 150/282 (53%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I +V TF ++ EG ++EA +F M K GLEP+ ++Y +L+D +C +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+F+ M + ++ D+ ++I+ L K +++A N + K+ D + YN+
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G C L R +A ++ + PN +T L+ VLCK++ +D AI + + E+G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+PN TY LMD K ++ + ++F+++ KG + ++ +YS++IDG CK G DEA
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ + + +PD V Y I+IR K G +A L M+
Sbjct: 762 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 149/278 (53%), Gaps = 1/278 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +++AL +G V +A + +++++G IVS + ++ G V ++ A + +
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLS 275
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
++ G +V ++ +ING CK +D A+ L M + I D I Y++LIDG K
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
KL ++ H+G+ +V+ ++ +DV KS + A + K++ QGI PN+ TYT
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ GLC+ GR+ +A ++ IL +G ++ TYS +IDG+CK G L M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
G PD V YG+++ L K+G A + +M+ +S+
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 35/320 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q I V T+ IL++ LC++G + EA ++ ++K+G+EP+IV+YSSL+DG+C
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ ++ M++ G DV Y ++++GL K ++ A +M + I + + +NS
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDG C+L R +A K+ M GI P+V T+ ++ V ++ A+ L ++ + G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 181 IQPNMYTYTVLMDGLCK-----VG------------------------------RLKDAQ 205
++P+ Y L+D CK +G R++DA
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ F +++ ++ TY+ MI GYC DEA + ++ + P+ VT I+I L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 266 FKKGENEKAEKLLREMVARS 285
K + + A ++ M +
Sbjct: 682 CKNNDMDGAIRMFSIMAEKG 701
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V + +LV+ L K+G + A M+ Q + N+V ++SL+DG+C + ++A +F
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G+ DV ++T ++ ++EA L M + D + Y +LID CK
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +L + M I ++ N ++ +L K H ++ A + E ++P++ TY
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ G C + RL +A+ IF+ + + + N T +++I CK D A+ + S M
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P+AVTYG ++ K + E + KL EM
Sbjct: 700 KGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V F+ ++ K G++ A V+ M+ QG+ PN+V+Y+ L+ G C + +A ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+++RG+ + +Y+ +I+G CK + ++L +M D + Y L+DGL K
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A + +M + I NV+ +N L+D C+ + D A+ + + + GI+P++ T+
Sbjct: 475 GLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T +M GRL++A +F + G + Y +ID +CK L L M+
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQR 594
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ D ++I LFK E A K ++
Sbjct: 595 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 37/292 (12%)
Query: 31 NVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGL 90
NV + + L+ ++ + LM+ C V+KA +IF + Q GV S ++N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTI-CYNSLIDGL-CKLE--RSFDAWKLVNEMNHR-- 144
VD +++ I + + ++D L CK E ++ D +LV E R
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 145 -----------------------------GIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
G PNV+T+ L++ CK +DRA L K
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+E++GI+P++ Y+ L+DG K G L ++F L KG L+V +S ID Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
A ++ +M G P+ VTY I+I+ L + G +A + +++ R +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ K +++ + +F M ++G+ P+IVSYS ++DG C V++A +IF+
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+ + DV +Y I+I G CK+ + EA L M + D + +L
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 145/263 (55%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++NIL++ L + G + EA ++ +M +G + +Y + G C+ VNKA + +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G DV +Y II+ LCK K ++EA +L+ EM + ++ N+LI GL + R
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + EM G P V++YN L+ LCK+ A A +K++ E G +P++ TY++L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GLC+ ++ A E++ L G +V ++++I G C G D+A+ +M+ ME C
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 252 IPDAVTYGIIIRALFKKGENEKA 274
+ VTY ++ FK G++ +A
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRA 623
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 154/280 (55%), Gaps = 2/280 (0%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ +R++N L+ A + + +++FA G+ PN+ +Y+ L+ C KE KA+
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
++M + G DV SY+ +IN L K +D+A L +EM + + D CYN LIDG
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 127 KLERSFDAWKLVNE-MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + A +L + + + PNV T+N ++ L K VD + + +++++ + ++
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDL 290
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
YTY+ L+ GLC G + A+ +F ++ + +++V TY+ M+ G+C+ G E+L L
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
ME + + V+Y I+I+ L + G+ ++A + R M A+
Sbjct: 351 MEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 148/277 (53%), Gaps = 1/277 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+N ++ C+ G +KE+ ++ +M + NIVSY+ L+ G ++++A I+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIW 382
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +G D +Y I I+GLC V++A ++ E+ S D Y S+ID LCK
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK 442
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+R +A LV EM+ G+ N N L+ L + + A ++++ + G +P + +Y
Sbjct: 443 KRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSY 502
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+L+ GLCK G+ +A +++L G+ +++TYS+++ G C++ D AL L +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
SG D + + I+I L G+ + A ++ M R+
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 150/274 (54%), Gaps = 2/274 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V +++ ++ L K G + +A +F M ++G+ P++ Y+ L+DG+ K+ A +++
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 69 NFMVQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ +++ V +V+++ I+I+GL K VD+ + M + D Y+SLI GLC
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A + NE++ R +V+TYN +L C+ + ++ L + +E + N+ +
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVS 361
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +L+ GL + G++ +A I++ + KGY + TY + I G C G ++AL +M ++E
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
SSG D Y II L KK E+A L++EM
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 146/280 (52%), Gaps = 1/280 (0%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ ++ T++ L+ LC GNV +A++VF + ++ ++V+Y++++ G+C ++ ++ +
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE 346
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
++ M + ++ SY I+I GL + +DEA + M +K AD Y I GLC
Sbjct: 347 LWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
A ++ E+ G +V Y ++D LCK ++ A L+K++ + G++ N +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
L+ GL + RL +A +++ G V +Y+++I G CK G F EA + +M
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G PD TY I++ L + + + A +L + + L
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGL 565
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 110/214 (51%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ L ++ + EA M K G P +VSY+ L+ G C + +A M++
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
G D+++Y+I++ GLC+ + +D A L ++ + D + +N LI GLC + + D
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A ++ M HR N++TYN L++ K +RA + + + G+QP++ +Y +M
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMK 647
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
GLC + A E F D G V T+++++
Sbjct: 648 GLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 103/183 (56%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++NIL+ LCK G EA M++ G +P++ +YS L+ G C ++++ A ++++
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+Q G+ DV + I+I+GLC + +D+A +++ M + A+ + YN+L++G K+
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
S A + M G+ P++I+YN ++ LC V A+ GI P +YT+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 190 VLM 192
+L+
Sbjct: 679 ILV 681
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V + +++ LCK+ ++EA N+ M K G+E N ++L+ G + +A
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + G V SY I+I GLCK EA + + EM D Y+ L+ GLC+
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR- 546
Query: 129 ERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+R D A +L ++ G+ +V+ +N L+ LC +D A+ ++ +E + N+ T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y LM+G KVG A I+ + G ++ +Y+ ++ G C A+
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 248 SSGCIPDAVTYGIIIRALFKK 268
+ G P T+ I++RA+ +
Sbjct: 667 NHGIFPTVYTWNILVRAVVNR 687
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ +V NIL+ LC G + +A V A M + N+V+Y++LM+G+ V + N+A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
I+ +M + G+ D+ SY I+ GLC + V A ++ + I +N L+
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 162 KSHHVDRAIALIKKIEE-QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
K+ D+A+ + K++ E G +P + +Y L++ + + + +F G N+
Sbjct: 90 KNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNL 149
Query: 221 RTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+TY+V+I CK+ F++A + M G PD +Y +I L K G+ + A +L E
Sbjct: 150 QTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDE 209
Query: 281 MVARSL 286
M R +
Sbjct: 210 MSERGV 215
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 48/83 (57%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A + T+N L+E K G+ A ++ M K GL+P+I+SY+++M G C+ + V+ A +
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 68 FNFMVQRGVTHDVQSYTIIINGL 90
F+ G+ V ++ I++ +
Sbjct: 662 FDDARNHGIFPTVYTWNILVRAV 684
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 150/275 (54%), Gaps = 2/275 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ NI V +LCK N++ A+ + ++ G+ P++++Y++L+ GY +++A +
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + G+ DV +Y +I+G K M++ L +EM + D YN+L+ KL
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKL 131
Query: 129 ERSFDAWKLVNEMNH-RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A+K+++E H G+ P + TYN LLD LCKS H D AI L K ++ + ++P + T
Sbjct: 132 GRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMT 190
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +L++GLCK R+ + +++ GY N TY+ M+ Y K ++ L L KM+
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G D ++ AL K G E+A + + E+V
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 145/280 (51%), Gaps = 3/280 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+N L++ + + EA V M + G+EP++ +Y+SL+ G +N+ +F
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNE-MHSKKIIADTICYNSLIDGLCK 127
+ M+ G++ D+ SY +++ K+ EA+ +L+E +H ++ YN L+D LCK
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ +A +L + R + P ++TYN L++ LCKS V +++++++ G PN T
Sbjct: 167 SGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT ++ K R++ ++F + +GY + ++ K G +EA M ++
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Query: 248 SSGCIP-DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
SG D V+Y ++ FK G + + LL E+ + L
Sbjct: 286 RSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGL 325
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 145/270 (53%), Gaps = 6/270 (2%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ T+NIL++ALCK G+ A +F +K ++P +++Y+ L++G C + V +
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFK-HLKSRVKPELMTYNILINGLCKSRRVGSVDWMMR 212
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ + G T + +YT ++ K K +++ L +M + D +++ L K
Sbjct: 213 ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG 272
Query: 130 RSFDAWKLVNEMNHRGI-PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R+ +A++ ++E+ G ++++YN LL++ K ++D L+++IE +G++P+ YT+
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T++++GL +G A++ I G +V T + +IDG CK G D A+ L + ME
Sbjct: 333 TIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME- 391
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+ D TY ++ L K G A KLL
Sbjct: 392 ---VRDEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ +V T+N L+ K + +F M+ GL P++ SY++LM Y + +A
Sbjct: 79 IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAF 138
Query: 66 DIFNFMVQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
I + + G+ + +Y I+++ LCK D A L + S ++ + + YN LI+G
Sbjct: 139 KILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILING 197
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LCK R ++ E+ G PN +TY +L + K+ +++ + L K++++G +
Sbjct: 198 LCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALILM 243
+ ++ L K GR ++A E +++ G + ++ +Y+ +++ Y K+G D L+
Sbjct: 258 GFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL 317
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++E G PD T+ II+ L G AEK L
Sbjct: 318 EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHL 352
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 7/231 (3%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ E+ T+NIL+ LCK V + + K G PN V+Y++++ Y K + K
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGL 243
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYNSLIDG 124
+F M + G T D + +++ L K +EA+ ++E+ S D + YN+L++
Sbjct: 244 QLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNL 303
Query: 125 LCKLERSFDAW-KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
K + + DA L+ E+ +G+ P+ T+ +++ L + A + I E G+QP
Sbjct: 304 YFK-DGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
++ T L+DGLCK G + A +F + ++ + TY+ ++ CK+G
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 143/264 (54%), Gaps = 2/264 (0%)
Query: 12 TFNILVEALCKEGNVKEA-KNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
TFN L+ A+C G + EA +N+F M + +E ++ SY++L+D C +++ A +I
Sbjct: 341 TFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + + +V SY+ +I+G K DEA +L EM I D + YN+L+ K+ R
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
S +A ++ EM GI +V+TYN LL K D + +++ + + PN+ TY+
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+DG K G K+A EIF++ G +V YS +ID CK GL A+ L+ +M G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 251 CIPDAVTYGIIIRALFKKGENEKA 274
P+ VTY II A + +++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRS 603
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 151/272 (55%), Gaps = 1/272 (0%)
Query: 12 TFNILVEALCKEG-NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
T+N +++A K G K+ F M + G++P+ ++++SL+ A+++F+
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M R + DV SY +++ +CK +D A+ +L +M K+I+ + + Y+++IDG K R
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A L EM + GI + ++YN LL + K + A+ +++++ GI+ ++ TY
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ G K G+ + +++F ++ + N+ TYS +IDGY K GL+ EA+ + + +S+G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
D V Y +I AL K G A L+ EM
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 135/253 (53%), Gaps = 4/253 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I+ +V ++N L++A+CK G + A + A M + + PN+VSYS+++DG+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++A ++F M G+ D SY +++ K+ +EA +L EM S I D + YN+
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ G K + + K+ EM + PN++TY+ L+D K A+ + ++ + G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ ++ Y+ L+D LCK G + A + ++ +G + NV TY+ +ID + + D +
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS- 603
Query: 241 ILMSKMESSGCIP 253
+ + G +P
Sbjct: 604 ---ADYSNGGSLP 613
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 1/225 (0%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+V AK IF G + V +++ +I+ + + +EA S+ N M + + + YN
Sbjct: 248 KVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYN 307
Query: 120 SLIDGLCKLERSF-DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
++ID K F K +EM G+ P+ IT+N LL V + + A L ++
Sbjct: 308 AVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN 367
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ I+ ++++Y L+D +CK G++ A EI + +K NV +YS +IDG+ K G FDE
Sbjct: 368 RRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDE 427
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
AL L +M G D V+Y ++ K G +E+A +LREM +
Sbjct: 428 ALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ ++ L + G++ A+ IF+ GY V +S +I Y + GL +EA+ + + M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 249 SGCIPDAVTYGIIIRALFKKG-ENEKAEKLLREM 281
G P+ VTY +I A K G E ++ K EM
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+V ++ L++ALCK G V A ++ M K+G+ PN+V+Y+S++D + ++++
Sbjct: 545 LRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSA 604
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D N G + S + + V + + L + + D C + +
Sbjct: 605 DYSN-----GGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKD--CEEGMQELS 657
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
C LE + +M+ I PNV+T++ +L+ + + + A L++++
Sbjct: 658 CILE-------VFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 1/257 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ TFN LV CK G V EAK +++ G +P+ +Y+S + G+C KE
Sbjct: 146 MLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE 205
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ A +F M Q G + SYT +I GL + K +DEA SLL +M + Y
Sbjct: 206 VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID LC + +A L +M+ GI P+ Y L+ C +D A L++ + E G
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ PN+ TY L+ G CK + A + +L + ++ TY+ +I G C G D A
Sbjct: 326 LMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAY 384
Query: 241 ILMSKMESSGCIPDAVT 257
L+S ME SG +P+ T
Sbjct: 385 RLLSLMEESGLVPNQRT 401
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 147/271 (54%), Gaps = 1/271 (0%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ +N L+ +L + G V+E K ++ M++ + P+I ++++L++GYC + V +AK +
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
++Q G D +YT I G C+ K VD A+ + EM + + Y LI GL + ++
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A L+ +M PNV TY L+D LC S A+ L K++ E GI+P+ YTV
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ C L +A + + +L G NV TY+ +I G+CK+ + +A+ L+SKM
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNV-HKAMGLLSKMLEQN 359
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+PD +TY +I G + A +LL M
Sbjct: 360 LVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 10/277 (3%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++ LV LC + E + +M+K S +S+ D +V + +
Sbjct: 60 VTSYASLVTLLCSQEIPYEVPKITILMIK--------SCNSVRDALFVVDFCRTMRKGDS 111
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
F ++ +T + Y +++ L + +V+E L EM + D +N+L++G CKL
Sbjct: 112 FEIKYKLTP--KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A + V + G P+ TY + C+ VD A + K++ + G N +YT
Sbjct: 170 YVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYT 229
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ GL + ++ +A + + NVRTY+V+ID C G EA+ L +M S
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PD Y ++I++ ++A LL M+ L
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y L+ L + G +++ + ++ ++L + ++ T++ +++GYCK G EA ++ +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+GC PD TY I ++ E + A K+ +EM H
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCH 222
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 41/322 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q I V T+ IL++ LC++G + EA ++ ++K+G+EP+IV+YSSL+DG+C
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ ++ M++ G DV Y ++++GL K ++ A +M + I + + +NS
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL------DVLCKS----------- 163
LIDG C+L R +A K+ M GI P+V T+ ++ D CK
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 164 ------------------------HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
H ++ A + E ++P++ TY ++ G C +
Sbjct: 562 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYG 259
RL +A+ IF+ + + + N T +++I CK D A+ + S M G P+AVTYG
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 260 IIIRALFKKGENEKAEKLLREM 281
++ K + E + KL EM
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEM 703
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 143/264 (54%), Gaps = 1/264 (0%)
Query: 1 MVLQCIDAE-VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK 59
+VL C A V TF L+ CK G + A ++F VM ++G+EP++++YS+L+DGY
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ +F+ + +GV DV ++ I+ K + A + M + I + + Y
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI GLC+ R ++A+ + ++ RG+ P+++TY+ L+D CK ++ AL + + +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G P++ Y VL+DGL K G + A +L + LNV ++ +IDG+C+ FDEA
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 240 LILMSKMESSGCIPDAVTYGIIIR 263
L + M G PD T+ ++R
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMR 539
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 150/288 (52%), Gaps = 6/288 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLM------DG 54
M+ Q I V FN L++ C+ EA VF +M G++P++ +++++M D
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDA 546
Query: 55 YCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD 114
+C + +F+ M + ++ D+ ++I+ L K +++A N + K+ D
Sbjct: 547 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 115 TICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+ YN++I G C L R +A ++ + PN +T L+ VLCK++ +D AI +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 666
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
+ E+G +PN TY LMD K ++ + ++F+++ KG + ++ +YS++IDG CK G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
DEA + + + +PD V Y I+IR K G +A L M+
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 774
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 149/278 (53%), Gaps = 1/278 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +++AL +G V +A + +++++G IVS + ++ G V ++ A + +
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQIEVASRLLS 275
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
++ G +V ++ +ING CK +D A+ L M + I D I Y++LIDG K
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
KL ++ H+G+ +V+ ++ +DV KS + A + K++ QGI PN+ TYT
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ GLC+ GR+ +A ++ IL +G ++ TYS +IDG+CK G L M
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
G PD V YG+++ L K+G A + +M+ +S+
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 139/257 (54%)
Query: 25 NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYT 84
++ A + ++++ G PN+V++ +L++G+C E+++A D+F M QRG+ D+ +Y+
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYS 325
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
+I+G K M+ L ++ K + D + ++S ID K A + M +
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ 385
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
GI PNV+TY L+ LC+ + A + +I ++G++P++ TY+ L+DG CK G L+
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+++D++ GY +V Y V++DG K+GL A+ KM + V + +I
Sbjct: 446 FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDG 505
Query: 265 LFKKGENEKAEKLLREM 281
+ ++A K+ R M
Sbjct: 506 WCRLNRFDEALKVFRLM 522
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 118/210 (56%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I A++ N+++ L K +++A F +++ +EP+IV+Y++++ GYC ++ +++A+
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
IF + + + TI+I+ LCK +D A + + M K + + Y L+D
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K ++KL EM +GI P++++Y+ ++D LCK VD A + + + + P++
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
Y +L+ G CKVGRL +A +++ +L G
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 37/291 (12%)
Query: 31 NVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGL 90
NV + + L+ ++ + LM+ C V+KA +IF + Q GV S ++N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTI-CYNSLIDGL-CKLE--RSFDAWKLVNEMNHR-- 144
VD +++ I + + ++D L CK E ++ D +LV E R
Sbjct: 192 IGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVG 251
Query: 145 -----------------------------GIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
G PNV+T+ L++ CK +DRA L K
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+E++GI+P++ Y+ L+DG K G L ++F L KG L+V +S ID Y K G
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
A ++ +M G P+ VTY I+I+ L + G +A + +++ R +
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ K +++ + +F M ++G+ P+IVSYS ++DG C V++A +IF+
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+ + DV +Y I+I G CK+ + EA L M + D + +L
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 35/281 (12%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
M+K G+EP+IV+ SSL++G+CL + A + M + G+ DV TI+I+ LCK ++
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
V A +L M + I + + Y+SLI GLCK R DA + ++EM+ + I PNVIT++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 156 LLDV-----------------------------------LCKSHHVDRAIALIKKIEEQG 180
L+D LC + VD AI ++ + +G
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY+ L +G K R+ D ++ D+ +G N + + +I GY + G D AL
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ M S+G IP+ +Y I++ LF GE EKA M
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 147/274 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T++ L+ LCK G + +A+ M + + PN++++S+L+D Y +++K
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ M+Q + +V +Y+ +I GLC VDEA +L+ M SK + + Y++L +G
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K R D KL+++M RG+ N ++ N L+ ++ +D A+ + + G+ PN+
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+Y +++ GL G ++ A F+ + +L++ TY++MI G CK + EA L K
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK 318
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
++ PD Y I+I L + G +A+ L R
Sbjct: 319 LKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ ID V T++ L+ LC V EA + +M+ +G PN+V+YS+L +G+
Sbjct: 144 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR 203
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ + + M QRGV + S +I G + +D A + M S +I + YN
Sbjct: 204 VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ GL A M ++ITY ++ +CK+ V A L K++ +
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKR 323
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
++P+ YT+++ L + G +A D L + Y +VR
Sbjct: 324 VEPDFKAYTIMIAELNRAGMRTEA-----DALNRFYQKHVR 359
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 84/147 (57%)
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
+M GI P+++T + L++ C S+ + A+ + ++E+ GI+ ++ T+L+D LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYG 259
+ A E+ + + +G + NV TYS +I G CK G +A + +M+S P+ +T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 260 IIIRALFKKGENEKAEKLLREMVARSL 286
+I A K+G+ K + + + M+ S+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 61/113 (53%)
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
K+ + GI+P++ T + L++G C +KDA + + G +V +++ID CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L AL ++ +M+ G P+ VTY +I L K G AE+ L EM ++ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKIN 115
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 166/287 (57%), Gaps = 6/287 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ +V +++IL++ L KEGNV+EA + M+K+G+EPN+++Y++++ G C + +
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A +FN ++ G+ D Y +I+G+C+ ++ A+S+L +M + I + YN+
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I+GLC R +A ++ +G+ +VITY+ LLD K ++D + + ++ E
Sbjct: 388 VINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I ++ +L+ +G +A +++ + + TY+ MI GYCK G +EAL
Sbjct: 443 IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ +++ S + AV Y II AL KKG + A ++L E+ + L+
Sbjct: 503 EMFNELRKSS-VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLY 548
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 142/271 (52%), Gaps = 17/271 (6%)
Query: 20 LCKEGNVKEAKNVFAVMVKQGLE--------PNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
LCK G+ + A V+ +M ++GL +V +D Y LV VN + + M
Sbjct: 596 LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV--VNAGETTLSSM 653
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
DV YTIIINGLCK + +A +L + S+ + +TI YNSLI+GLC+
Sbjct: 654 -------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L + + + G+ P+ +TY L+D LCK A L+ + +G+ PN+ Y +
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG CK+G+ +DA + ++ + T S MI GYCK+G +EAL + ++ +
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
D + +I+ KG E+A LLREM+
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 147/275 (53%), Gaps = 3/275 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSY--SSLMDGYCLVKEVNKAKDIFN 69
TF L+ ++G + A V +M + + ++ S+++ G+C + + A F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 70 FMVQRGV-THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
V GV ++ +YT +++ LC++ VDE L+ + + D + Y++ I G K
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
DA EM +G+ +V++Y+ L+D L K +V+ A+ L+ K+ ++G++PN+ TY
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T ++ GLCK+G+L++A +F IL G ++ Y +IDG C++G + A ++ ME
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
G P +TY +I L G +A+++ + +V
Sbjct: 376 RGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG 410
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 120/206 (58%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V + I++ LCKEG + +A N+ + +G+ N ++Y+SL++G C + +A +F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ + G+ +Y I+I+ LCK + +A LL+ M SK ++ + I YNS++DG CKL
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
++ DA ++V+ + P+ T + ++ CK ++ A+++ + +++ I + + +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIK 214
L+ G C GR+++A+ + +++L+
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 36/304 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDG------------------ 54
+N +++ALCK+G + A V + ++GL +I + +L+
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 55 -----------------YCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
C A +++ M ++G+T S TI+ + ++ +D
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPS-TILKTLVDNLRSLD 637
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
++N + D I Y +I+GLCK A L + RG+ N ITYN L+
Sbjct: 638 AYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLI 697
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ LC+ + A+ L +E G+ P+ TY +L+D LCK G DA+++ ++ KG
Sbjct: 698 NGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV 757
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
N+ Y+ ++DGYCK G ++A+ ++S+ PDA T +I+ KKG+ E+A +
Sbjct: 758 PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 817
Query: 278 LREM 281
E
Sbjct: 818 FTEF 821
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 138/280 (49%), Gaps = 8/280 (2%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF- 68
R ++I+ A ++A+ + + K + P SL+ G+ + ++ + +K +
Sbjct: 62 RIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRD-DPSKGLLI 120
Query: 69 --NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI--IADTICYNSLIDG 124
+ + G ++ +I + +D A +L M +K + D +++I G
Sbjct: 121 LRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 125 LCKLERSFDAWKLVNEMNHRGI-PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
CK+ + A G+ PN++TY L+ LC+ VD L++++E++G +
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF 240
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ Y+ + G K G L DA ++++ KG N +V +YS++IDG KEG +EAL L+
Sbjct: 241 DCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLL 300
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
KM G P+ +TY IIR L K G+ E+A L +++
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS 340
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 39 QGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSY--TIIINGLCKIKMV 96
G P+ +++ SL+ + E++ A ++ M + V + ++ + +I+G CKI
Sbjct: 128 HGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKP 187
Query: 97 DEAWSLL-NEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
+ A + + S ++ + + Y +L+ LC+L + + LV + G + + Y+
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
+ K + A+ +++ E+G+ ++ +Y++L+DGL K G +++A + ++ +G
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
N+ TY+ +I G CK G +EA +L +++ S G D Y +I + +KG +A
Sbjct: 308 VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAF 367
Query: 276 KLLREMVARSLH 287
+L +M R +
Sbjct: 368 SMLGDMEQRGIQ 379
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 114/387 (29%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN--- 62
I + T+N ++ LC G V EA V +G+ ++++YS+L+D Y V+ ++
Sbjct: 378 IQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 63 --------------------------------KAKDIFNFMVQRGVTHDVQSYTIIINGL 90
+A ++ M + +T D +Y +I G
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
CK ++EA + NE+ K ++ +CYN +ID LCK A +++ E+ +G+ ++
Sbjct: 493 CKTGQIEEALEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEE--QGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
T LL + + + L+ +E+ + M +L+ LCK G + A E++
Sbjct: 552 HTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL--LCKRGSFEAAIEVY 609
Query: 209 QDILIKGYNL------------NVRT----------------------YSVMIDGYCKEG 234
+ KG + N+R+ Y+++I+G CKEG
Sbjct: 610 MIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 669
Query: 235 L-----------------------------------FDEALILMSKMESSGCIPDAVTYG 259
EAL L +E+ G +P VTYG
Sbjct: 670 FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYG 729
Query: 260 IIIRALFKKGENEKAEKLLREMVARSL 286
I+I L K+G AEKLL MV++ L
Sbjct: 730 ILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 123/269 (45%), Gaps = 8/269 (2%)
Query: 27 KEAKNVFAV--MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYT 84
+ + +F++ ++K G P + S + +++ N ++ + + + + + Y+
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDG--LCKLERSFDAWKLVNEM 141
I+ + ++A +N SK I T +SLI G + + + S L + +
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL 125
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ-P-NMYTYTVLMDGLCKVG 199
+ G P+ +T+ L+ + +D AI +++ + + + P + + + ++ G CK+G
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG 185
Query: 200 RLKDAQEIFQDILIKGYNL-NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
+ + A F+ + G + N+ TY+ ++ C+ G DE L+ ++E G D V Y
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSLH 287
I FK G A REMV + ++
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMN 274
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 100/254 (39%), Gaps = 67/254 (26%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSY----------------------- 48
T+ IL++ LCKEG +A+ + MV +GL PNI+ Y
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRK 786
Query: 49 ------------SSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMV 96
SS++ GYC ++ +A +F + ++ D + +I G C +
Sbjct: 787 MMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRM 846
Query: 97 DEAWSLLNEMH-SKKII----------ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+EA LL EM S+ ++ A++ + LC+ R A K+++E++
Sbjct: 847 EEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTI 906
Query: 146 IPP--NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV-----LMDGLCKV 198
P N+ +Y L + + E+ I+ Y + + LC
Sbjct: 907 YPSGKNLGSYQRL--------------QFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTS 952
Query: 199 GRLKDAQEIFQDIL 212
G+L+ A E +L
Sbjct: 953 GKLEQANEFVMSVL 966
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 166/345 (48%), Gaps = 71/345 (20%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A V N ++ LCK+G EA + + M +G+ PN+VSY+++M G+C K ++ A+ +
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 68 FNFMVQRGV----------------THDVQS-------------------YTIIINGLCK 92
F+ ++++G+ HD Q+ Y IINGLCK
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 93 IKMVDEAWSLL-NEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+ +A LL N + K++ + YNS+IDG K A EM GI PNVI
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY L++ LCK++ +D+A+ + +++ +G++ ++ Y L+DG CK ++ A +F ++
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 212 LIKGYNL-----------------------------------NVRTYSVMIDGYCKEGLF 236
L +G N ++ TY+ +IDG K+G
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNL 740
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
A L ++M++ G +PD + Y +I+ L KKG+ K K+ EM
Sbjct: 741 ILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 153/275 (55%), Gaps = 1/275 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQG-LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ ++ LCK G +A+ + A M+++ L + +SY+S++DG+ E++ A + M
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G++ +V +YT ++NGLCK +D+A + +EM +K + D Y +LIDG CK
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L +E+ G+ P+ YN L+ ++ A+ L KK+ + G++ ++ TYT L
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DGL K G L A E++ ++ G + Y+V+++G K+G F + + + +M+ +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P+ + Y +I +++G ++A +L EM+ + +
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 135/251 (53%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N +++ KEG + A + M G+ PN+++Y+SLM+G C +++A ++ + M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+GV D+ +Y +I+G CK ++ A +L +E+ + + YNSLI G L
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNM 705
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A L +M G+ ++ TY L+D L K ++ A L +++ G+ P+ YTV+
Sbjct: 706 VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI 765
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GL K G+ ++F+++ NV Y+ +I G+ +EG DEA L +M G
Sbjct: 766 VNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Query: 252 IPDAVTYGIII 262
+PD T+ I++
Sbjct: 826 LPDGATFDILV 836
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 2/278 (0%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C+ ++ T+ ++ A K+GN+ +A + M+ G+ N+V+ +SL+ G+C ++ A
Sbjct: 300 CVPSQ-ETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+F+ M + G + + +++++I K +++A +M + +++I G
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
K ++ +A KL +E G+ NV N +L LCK D A L+ K+E +GI PN
Sbjct: 419 WLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ +Y +M G C+ + A+ +F +IL KG N TYS++IDG + AL +++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M SS + V Y II L K G+ KA +LL M+
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 72/358 (20%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I V L+ CK ++ A +F M K+G PN V++S L++ + E
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ KA + + M G+T V II G K + +EA L +E + +C N+
Sbjct: 390 MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NT 448
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ LCK ++ +A +L+++M RGI PNV++YN ++ C+ ++D A + I E+G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 181 IQPNMYTYTVLMDG-----------------------------------LCKVGRLKDAQ 205
++PN YTY++L+DG LCKVG+ A+
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 206 EI------------------------------------FQDILIKGYNLNVRTYSVMIDG 229
E+ ++++ G + NV TY+ +++G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 230 YCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
CK D+AL + +M++ G D YG +I K+ E A L E++ L+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 140/274 (51%), Gaps = 2/274 (0%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N + AL + ++ EAK +++ MV G++ + V+ LM ++ +A ++ + ++
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI-IADTICYNSLIDGLCKLERSF 132
RG D Y++ + CK + A SLL EM KK+ + Y S+I K
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA +L +EM GI NV+ L+ CK++ + A+ L K+E++G PN T++VL+
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ K G ++ A E ++ + + G +V +I G+ K +EAL L + +G +
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-L 440
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ I+ L K+G+ ++A +LL +M +R +
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
G E N +++ L++ Y ++ + A DI N M++ V ++ L + + EA
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
L + M + + D + L+ + E+ +A ++++ RG P+ + Y+ +
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 160 LCKSHHVDRAIALIKKIEEQGI-QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
CK+ + A +L+++++E+ + P+ TYT ++ K G + DA + ++L G ++
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
NV + +I G+CK AL+L KME G P++VT+ ++I K GE EKA +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 279 REM 281
++M
Sbjct: 398 KKM 400
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ + L++ CK N++ A +F+ ++++GL P+ Y+SL+ G+ + + A D++
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M++ G+ D+ +YT +I+GL K + A L EM + ++ D I Y +++GL K
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ K+ EM + PNV+ YN ++ + ++D A L ++ ++GI P+ T+
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 189 TVLMDGLCKVGRLK 202
+L+ G +VG L+
Sbjct: 833 DILVSG--QVGNLQ 844
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 110/224 (49%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T+ L+ LCK + +A + M +G++ +I +Y +L+DG+C + A
Sbjct: 615 ISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESAS 674
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F+ +++ G+ Y +I+G + + A L +M + D Y +LIDGL
Sbjct: 675 ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K A +L EM G+ P+ I Y +++ L K + + + +++++ + PN+
Sbjct: 735 LKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 794
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
Y ++ G + G L +A + ++L KG + T+ +++ G
Sbjct: 795 LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L+C ++ T+ L++ L K+GN+ A ++ M GL P+ + Y+ +++G +
Sbjct: 720 LRC---DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
K +F M + VT +V Y +I G + +DEA+ L +EM K I+ D ++ L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 123 DG 124
G
Sbjct: 837 SG 838
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%)
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
KLV+ G N +N LL+ K D A+ ++ ++ E + P + L
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
+ L +A+E++ ++ G + + T +++ +E EAL ++S+ G PD+
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ Y + ++A K + A LLREM + L
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 148/269 (55%), Gaps = 1/269 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N +++ C++G++ A+ M KQG++P+ ++Y+ L+ +C + E+ A+ N M
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+GV+ V++Y I+I G + D+ + +L EM + + + Y +LI+ LCK +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A + +M RG+ P V YN L+D C ++ A K++ ++GI+ N+ TY L+
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGL G+L +A+++ +I KG +V TY+ +I GY G + L +M+ SG
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
P TY ++I K+G E E+L EM
Sbjct: 632 PTLKTYHLLISLCTKEG-IELTERLFGEM 659
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ + TFN L++ L K G V++A+NV M G P+ ++S L DGY ++ A
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ V GV + + +I++N LCK +++A +L +K ++ + + YN++IDG
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGY 399
Query: 126 CK----------------------------LERSF-------DAWKLVNEMNHRGIPPNV 150
C+ L R F +A K VN+M +G+ P+V
Sbjct: 400 CRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
TYN L+ + + D+ ++K++E+ G PN+ +Y L++ LCK +L +AQ + +D
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ +G + VR Y+++IDG C +G ++A +M G + VTY +I L G+
Sbjct: 520 MEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579
Query: 271 NEKAEKLLREMVARSL 286
+AE LL E+ + L
Sbjct: 580 LSEAEDLLLEISRKGL 595
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 147/271 (54%), Gaps = 2/271 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T +IL+ ALCKEG +++A+ + + +GL PN V Y++++DGYC ++ A+ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G+ D +Y +I C++ ++ A +N+M K + YN LI G + +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR-KYE 474
Query: 132 FDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
FD + ++ EM G PNV++Y L++ LCK + A + + +E++G+ P + Y +
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+DG C G+++DA +++L KG LN+ TY+ +IDG G EA L+ ++ G
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD TY +I G ++ L EM
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 150/305 (49%), Gaps = 35/305 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ +L++ L K + NVF +++ P+ Y + + +V K ++FN M
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ V Y ++I+GLCK K +++A L +EM +++++ I YN+LIDG CK
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++K+ M I P++IT+N LL L K+ V+ A ++K++++ G P+ +T+++L
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 192 MDG-----------------------------------LCKVGRLKDAQEIFQDILIKGY 216
DG LCK G+++ A+EI + KG
Sbjct: 326 FDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
N Y+ MIDGYC++G A + + ME G PD + Y +IR + GE E AEK
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 277 LLREM 281
+ +M
Sbjct: 446 EVNKM 450
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 160/316 (50%), Gaps = 35/316 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V +N+L++ LCK + +A+ +F M+ + L P++++Y++L+DGYC K+
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG- 124
+ M + + ++ ++ GL K MV++A ++L EM + D ++ L DG
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 125 ----------------------------------LCKLERSFDAWKLVNEMNHRGIPPNV 150
LCK + A +++ +G+ PN
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+ YN ++D C+ + A I+ +E+QG++P+ Y L+ C++G +++A++
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ +KG + +V TY+++I GY ++ FD+ ++ +ME +G +P+ V+YG +I L K +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 271 NEKAEKLLREMVARSL 286
+A+ + R+M R +
Sbjct: 510 LLEAQIVKRDMEDRGV 525
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 140/261 (53%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ EA ++F + +G+ P+ S + L+D K+ ++F +++ Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
I K+ V + L N M +I YN LIDGLCK +R DA +L +EM R
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
+ P++ITYN L+D CK+ + +++ + ++++ I+P++ T+ L+ GL K G ++DA+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ +++ G+ + T+S++ DGY + AL + SG +A T I++ AL
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 266 FKKGENEKAEKLLREMVARSL 286
K+G+ EKAE++L +A+ L
Sbjct: 365 CKEGKIEKAEEILGREMAKGL 385
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 149/287 (51%), Gaps = 4/287 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + V T+NIL+ ++ + ++ M G PN+VSY +L++ C +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+ + M RGV+ V+ Y ++I+G C +++A+ EM K I + + YN+
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LIDGL + +A L+ E++ +G+ P+V TYN L+ + +V R IAL ++++ G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+P + TY +L+ LC ++ + +F ++ +K ++ Y+ ++ Y G ++A
Sbjct: 630 IKPTLKTYHLLI-SLCTKEGIELTERLFGEMSLKP---DLLVYNGVLHCYAVHGDMEKAF 685
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L +M D TY +I K G+ + L+ EM AR +
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 147/281 (52%), Gaps = 4/281 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +VR +N+L++ C +G +++A M+K+G+E N+V+Y++L+DG + ++++A+
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ + ++G+ DV +Y +I+G V +L EM I Y+ LI L
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SL 643
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C E +L EM+ + P+++ YN +L +++A L K++ E+ I +
Sbjct: 644 CTKEGIELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDK 700
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+ G KVG+L + + + ++ + TY++++ G+C+ + A + +
Sbjct: 701 TTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYRE 760
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M+ G + D ++ L ++ +++AE ++ EM R L
Sbjct: 761 MQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 135/278 (48%), Gaps = 26/278 (9%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D ++R +L++ + ++ A+ V + +++ P S L + L
Sbjct: 56 DEKLRNLRVLLQ----QNRIETARGVLSSLLRSDSTP-FASPKELFSAFSLSSP------ 104
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ HD SY ++ L + KM+ EA L + ++ I + L+D L
Sbjct: 105 --------SLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLV 155
Query: 127 KLER---SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
K ++ + + + + E + R P+ Y + K V + + L +++ I P
Sbjct: 156 KTKQFRVTINVFLNILESDFR---PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYP 212
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+++ Y VL+DGLCK R+ DA+++F ++L + ++ TY+ +IDGYCK G +++ +
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M++ P +T+ +++ LFK G E AE +L+EM
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 156 LLDVLC-KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
LL VL +S + A L + +GI P+ + T+L+D L K + + +F +IL
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+ + Y I K + L L ++M+ P Y ++I L K A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 275 EKLLREMVARSL 286
E+L EM+AR L
Sbjct: 234 EQLFDEMLARRL 245
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 154/269 (57%), Gaps = 2/269 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
F+ ++ + + G +++A V +M + G+EPN++ ++ +D + + KA M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ +V +Y +I G C + V+EA LL +MHSK + D + Y +++ LCK +R
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 132 FDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ L+ +M G+ P+ +TYN L+ +L K H D A+ +K +E+G + + Y+
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ LCK GR+ +A+++ ++L KG+ +V TY+ +++G+C+ G D+A L+ M +
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLL 278
G P+ V+Y ++ + + G++ +A +++
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 144/273 (52%), Gaps = 2/273 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N ++ C V+EA + M +G P+ VSY ++M C K + + +D+
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 70 FMV-QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + G+ D +Y +I+ L K DEA L + K D + Y++++ LCK
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
Query: 129 ERSFDAWKLVNEMNHRG-IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A L+NEM +G PP+V+TY +++ C+ VD+A L++ + G +PN +
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT L++G+C+ G+ +A+E+ ++ N TYSV++ G +EG EA ++ +M
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV 551
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
G P V +++++L + G +A K + E
Sbjct: 552 LKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 148/276 (53%), Gaps = 1/276 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ L K + EA ++G + + YS+++ C +++AKD+ N M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444
Query: 72 VQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ +G DV +YT ++NG C++ VD+A LL MH+ +T+ Y +L++G+C+ +
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
S +A +++N PN ITY+ ++ L + + A +++++ +G P +
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ LC+ GR +A++ ++ L KG +NV ++ +I G+C+ D AL ++ M
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D TY ++ L KKG +A +L+++M+ + +
Sbjct: 625 KHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 148/286 (51%), Gaps = 8/286 (2%)
Query: 7 DAEVRTFNI-------LVEALCKEGNVKEAKNVFAVMVKQG-LEPNIVSYSSLMDGYCLV 58
DA+ + F I +V ALCKEG + EAK++ M+ +G P++V+Y+++++G+C +
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 59 KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
EV+KAK + M G + SYT ++NG+C+ EA ++N ++I Y
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+ ++ GL + + +A +V EM +G P + N LL LC+ A +++
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+G N+ +T ++ G C+ L A + D+ + + +V TY+ ++D K+G E
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAE 647
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
A LM KM G P VTY +I + G+ + +L +M++R
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR 693
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 145/272 (53%), Gaps = 4/272 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V T+ +V C+ G V +AK + VM G +PN VSY++L++G C + +A+++
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
N + + + +Y++I++GL + + EA ++ EM K + N L+ LC+
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCR 571
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R+ +A K + E ++G NV+ + ++ C++ +D A++++ + +++T
Sbjct: 572 DGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFT 631
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT L+D L K GR+ +A E+ + +L KG + TY +I YC+ G D+ + ++ KM
Sbjct: 632 YTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Query: 248 S-SGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
S C Y +I L G+ E+A+ LL
Sbjct: 692 SRQKC---RTIYNQVIEKLCVLGKLEEADTLL 720
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 144/279 (51%), Gaps = 3/279 (1%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNK 63
C+ +V + I+ LCKE + E +++ M K+ GL P+ V+Y++L+ ++
Sbjct: 343 CLPDKVSYYTIM-GYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLI 122
A ++G D Y+ I++ LCK + EA L+NEM SK D + Y +++
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+G C+L A KL+ M+ G PN ++Y LL+ +C++ A ++ EE
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
PN TY+V+M GL + G+L +A ++ +++++KG+ ++++ C++G EA
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M + + GC + V + +I + E + A +L +M
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
++E L K + ++ V +M ++G+ ++S +M Y ++ A + M + G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
V ++ I+ + +++A L M I+ + + YN +I G C L R +A
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI-EEQGIQPNMYTYTVLMDG 194
+L+ +M+ +G P+ ++Y ++ LCK + L+KK+ +E G+ P+ TY L+
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG-CIP 253
L K +A +D KG+ ++ YS ++ CKEG EA L+++M S G C P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREM 281
D VTY ++ + GE +KA+KLL+ M
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+++++ L +EG + EA +V MV +G P V + L+ C ++A+
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ +G +V ++T +I+G C+ +D A S+L++M+ AD Y +L+D L K R
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 645
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L+ +M H+GI P +TY ++ C+ VD +A+++K+ + Q Y +
Sbjct: 646 AEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQV 703
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ LC +G+L++A + +L + +T +++GY K+G+ A + +M +
Sbjct: 704 IEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNL 763
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
IPD + + L KG+ ++A+KL+ +V R
Sbjct: 764 IPDVKMCEKLSKRLVLKGKVDEADKLMLRLVER 796
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
HD Y ++ L K K+ + +L M + I ++ ++ + + DA K+
Sbjct: 205 HDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKV 264
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
+ M G+ PN++ N +DV +++ +++A+ +++++ GI PN+ TY ++ G C
Sbjct: 265 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCD 324
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM-ESSGCIPDAV 256
+ R+++A E+ +D+ KG + +Y ++ CKE E LM KM + G +PD V
Sbjct: 325 LHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
Query: 257 TYGIIIRALFKKGENEKAEKLLRE 280
TY +I L K ++A L++
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKD 408
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 85/169 (50%)
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D + Y S+++ L K + + +++ M RGI ++ ++ ++ + A+ ++
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
++ G++PN+ +D + RL+ A + + + G NV TY+ MI GYC
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+EA+ L+ M S GC+PD V+Y I+ L K+ + L+++M
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA 374
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 5/179 (2%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A+V T+ LV+ L K+G + EA + M+ +G++P V+Y +++ YC + +V+ I
Sbjct: 627 ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI 686
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT-ICYNSLIDGLC 126
M+ R + Y +I LC + ++EA +LL ++ +D CY +L++G
Sbjct: 687 LEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCY-ALMEGYL 743
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPN 184
K A+K+ M +R + P+V L L VD A L+ ++ E+G I P
Sbjct: 744 KKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQ 802
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 150/273 (54%), Gaps = 4/273 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF-NF 70
+FN +V +CK G VK A+++ M + G EP+++SY+SL+DG+C ++ A + +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 71 MVQRGV--THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
G D+ S+ + NG K+KM+DE + + M K + + Y++ ID CK
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKS 176
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A K + M + PNV+T+ L+D CK+ ++ A++L K++ + N+ TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+DG CK G ++ A+E++ ++ N Y+ +IDG+ + G D A+ ++KM +
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G D YG+II L G+ ++A +++ +M
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 152/307 (49%), Gaps = 30/307 (9%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ L++ CK+G ++ A+ +++ MV+ +EPN + Y++++DG+ + + A
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ +G+ D+ +Y +II+GLC + EA ++ +M ++ D + + ++++ K
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 130 RSFDAWKLVNEMNHRGIPPNVIT------------------------------YNPLLDV 159
R A + +++ RG P+V+ Y L+D
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDA 412
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
LCK L KI E G+ P+ + YT + GLCK G L DA ++ ++ +G L+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
+ Y+ +I G +GL EA + +M +SG PD+ + ++IRA K+G A LL
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 280 EMVARSL 286
+M R L
Sbjct: 533 DMQRRGL 539
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 154/316 (48%), Gaps = 30/316 (9%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
++L+C V T++ ++ CK G ++ A F M + L PN+V+++ L+DGYC +
Sbjct: 154 VMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A ++ M + ++ +V +YT +I+G CK + A + + M ++ +++ Y +
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+IDG + S +A K + +M ++G+ ++ Y ++ LC + + A +++ +E+
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG----------- 229
+ P+M +T +M+ K GR+K A ++ ++ +G+ +V S MIDG
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 230 -------------------YCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
CKEG F E L SK+ +G +PD Y I L K+G
Sbjct: 394 VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 271 NEKAEKLLREMVARSL 286
A KL MV L
Sbjct: 454 LVDAFKLKTRMVQEGL 469
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 137/258 (53%), Gaps = 4/258 (1%)
Query: 33 FAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCK 92
A +V +G P+ S++S++ C + +V A+DI + M + G DV SY +I+G C+
Sbjct: 44 LAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCR 103
Query: 93 ---IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPN 149
I+ L H D + +NSL +G K++ + + + M + PN
Sbjct: 104 NGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPN 162
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
V+TY+ +D CKS + A+ ++ + PN+ T+T L+DG CK G L+ A +++
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ +LNV TY+ +IDG+CK+G A + S+M P+++ Y II F++G
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 270 ENEKAEKLLREMVARSLH 287
+++ A K L +M+ + +
Sbjct: 283 DSDNAMKFLAKMLNQGMR 300
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 132/254 (51%), Gaps = 9/254 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q + ++ + +++ LC G +KEA + M K L P++V ++++M+ Y
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA--WSLLNEMHSKKIIADTICY 118
+ A ++++ +++RG DV + + +I+G+ K + EA + + + A+ + Y
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK-------ANDVMY 406
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
LID LCK + +L ++++ G+ P+ Y + LCK ++ A L ++ +
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+G+ ++ YT L+ GL G + +A+++F ++L G + + + ++I Y KEG
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 239 ALILMSKMESSGCI 252
A L+ M+ G +
Sbjct: 527 ASDLLLDMQRRGLV 540
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 95 MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
MV EA L+ + + D N I L + K + + RG P+ ++N
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
++ +CK V A ++ + G +P++ +Y L+DG C+ G ++ A + + +
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 215 -GY--NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
G+ ++ +++ + +G+ K + DE + M M C P+ VTY I K GE
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGEL 179
Query: 272 EKAEKLLREM 281
+ A K M
Sbjct: 180 QLALKSFHSM 189
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 13/289 (4%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C+ + R FN L+ + G +E+ +F M + G+ P++++++SL+ A
Sbjct: 133 CVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMA 192
Query: 65 KDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
D+F+ M + GVT D ++ +ING CK MVDEA+ + +M D + YN++ID
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIID 252
Query: 124 GLCKLERSFDAWKLVNEMNHRG--IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
GLC+ + A +++ M + + PNV++Y L+ C +D A+ + + +G+
Sbjct: 253 GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGL 312
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG------YNLNVRTYSVMIDGYCKEGL 235
+PN TY L+ GL + R + +DILI G + + T++++I +C G
Sbjct: 313 KPNAVTYNTLIKGLSEAHRYDE----IKDILIGGNDAFTTFAPDACTFNILIKAHCDAGH 368
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
D A+ + +M + PD+ +Y ++IR L + E ++AE L E+ +
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLV 58
M L + +V T+N +++ LC+ G VK A NV + M+K+ + PN+VSY++L+ GYC+
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294
Query: 59 KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL---NEMHSKKIIADT 115
+E+++A +F+ M+ RG+ + +Y +I GL + DE +L N+ + D
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFT-TFAPDA 353
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
+N LI C A K+ EM + + P+ +Y+ L+ LC + DRA L +
Sbjct: 354 CTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Query: 176 IEEQGI-------QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
+ E+ + +P Y + + LC G+ K A+++F+ ++ +G + +Y +I
Sbjct: 414 LFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLIT 472
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G+C+EG F A L+ M +PD TY ++I L K GE A L+ M+ S
Sbjct: 473 GHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 41/261 (15%)
Query: 46 VSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII------------------ 87
+S ++++ L+K F+++ +G +H QS+ +++
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFS 125
Query: 88 -----NGLCKIK---------------MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
NG K++ + E+ L M I + +NSL+ L K
Sbjct: 126 IERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLK 185
Query: 128 LERSFDAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
R+ A L +EM G+ P+ T+N L++ CK+ VD A + K +E P++
Sbjct: 186 RGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL--NVRTYSVMIDGYCKEGLFDEALILMS 244
TY ++DGLC+ G++K A + +L K ++ NV +Y+ ++ GYC + DEA+++
Sbjct: 246 TYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFH 305
Query: 245 KMESSGCIPDAVTYGIIIRAL 265
M S G P+AVTY +I+ L
Sbjct: 306 DMLSRGLKPNAVTYNTLIKGL 326
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 4/271 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N + E LC G K+A+ VF ++K+G++ + SY +L+ G+C + A ++ M+
Sbjct: 433 YNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLML 491
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R D+++Y ++I+GL KI A L M + ++S++ L K + +
Sbjct: 492 RREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFAN 551
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+++ LV M + I N+ ++ +L S ++A +++ + + G M L+
Sbjct: 552 ESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LL 608
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
LC+ +L DA + L K +++ T + +I+G CK EA L +++ G
Sbjct: 609 GYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNH 668
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ ++ AL G+ E+ + + + M
Sbjct: 669 QQLSCHVVLRNALEAAGKWEELQFVSKRMAT 699
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 109/244 (44%), Gaps = 7/244 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ L+ C+EG K A + +M+++ P++ +Y L+DG + E A D M
Sbjct: 466 SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM 525
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++ ++ ++ L K K +E++ L+ M K+I + ++ L +
Sbjct: 526 LRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQK 585
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A+ +V + G ++ LL LC++ + A L+ E+ ++ T +
Sbjct: 586 EKAFLIVRLLYDNGY---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTV 642
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM----E 247
++GLCK R +A ++ +++ G + + + V+ + G ++E + +M E
Sbjct: 643 IEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRE 702
Query: 248 SSGC 251
S C
Sbjct: 703 SDDC 706
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 156/280 (55%), Gaps = 3/280 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ FN+ ++ LC+E V A F MV++G EP++VSY+ L++G +V A +I+
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL-NEMHSKKIIADTICYNSLIDGLCK 127
N M++ GV+ D ++ ++ GLC + VD A+ ++ E+ S ++ T+ YN+LI G CK
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R A L + M+ G P+++TYN LL+ ++ + RA ++ ++ GIQ + Y+
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 188 YTVLMDGLCKVGRLKDAQEIF-QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
Y L+ C+V +++ +G+ +V +YS +I+ +C+ +A L +M
Sbjct: 293 YNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G + + VTY +I+A ++G + A+KLL +M L
Sbjct: 352 RQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Score = 144 bits (362), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 143/274 (52%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L+ CK G +++A+ + + M K G EP++V+Y+ L++ Y + +A+ + MV
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G+ D SY ++ C++ D+ ++ + + + D + Y++LI+ C+ +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A++L EM +G+ NV+TY L+ + + A L+ ++ E G+ P+ YT ++
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D LCK G + A +F D++ + +Y+ +I G C+ G EA+ L M+ C
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD +T+ II L + + A K+ +M+ +
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ ++ T+N+L+ +K A+ V A MV+ G++ + SY+ L+ +C V +K
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC-- 309
Query: 67 IFNFMVQ----RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
+NFMV+ RG DV SY+ +I C+ +A+ L EM K ++ + + Y SLI
Sbjct: 310 -YNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ S A KL+++M G+ P+ I Y +LD LCKS +VD+A + + E I
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P+ +Y L+ GLC+ GR+ +A ++F+D+ K + T+ +I G + A +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 243 MSKMESSGCIPDAVTYGIIIRA 264
+M G D +I+A
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKA 509
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 8/235 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEP----NIVSYSSLMDGYC 56
MV I + ++N L++ C+ V + MVK+ +EP ++VSYS+L++ +C
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCR---VSHPDKCYNFMVKE-MEPRGFCDVVSYSTLIETFC 336
Query: 57 LVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI 116
KA +F M Q+G+ +V +YT +I + A LL++M + D I
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
Y +++D LCK A+ + N+M I P+ I+YN L+ LC+S V AI L + +
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC 231
+ + P+ T+ ++ GL + +L A +++ ++ KG+ L+ +I C
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 102/191 (53%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V +++ L+E C+ N ++A +F M ++G+ N+V+Y+SL+ + + AK +
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M + G++ D YT I++ LCK VD+A+ + N+M +I D I YNSLI GLC+
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R +A KL +M + P+ +T+ ++ L + + A + ++ ++G +
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 189 TVLMDGLCKVG 199
L+ C +
Sbjct: 504 DTLIKASCSMS 514
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 38/202 (18%)
Query: 118 YNSLIDGLCKLERSFDAW-KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
Y+ I GLCK+++ FD L+++M G P++ +N LD+LC+ + V A+ +
Sbjct: 82 YSRFISGLCKVKK-FDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN------------------- 217
++G +P++ +YT+L++GL + G++ DA EI+ ++ G +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 218 -----------------LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
L+ Y+ +I G+CK G ++A L S M GC PD VTY +
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 261 IIRALFKKGENEKAEKLLREMV 282
++ + ++AE ++ EMV
Sbjct: 261 LLNYYYDNNMLKRAEGVMAEMV 282
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 1/177 (0%)
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
MH + + A + Y S I L K +A ++ +EM H YN + VL +
Sbjct: 1 MH-QTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESR 59
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
+ A A+ ++ G +TY+ + GLCKV + + D+ G+ ++ ++V
Sbjct: 60 FELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNV 119
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+D C+E A+ M G PD V+Y I+I LF+ G+ A ++ M+
Sbjct: 120 YLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMI 176
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+R F L+ C+EG + EAK V M + GLEP+IV +++L+ GY ++ A D+ N
Sbjct: 236 LRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMN 295
Query: 70 FMVQRGVTHDVQSYTIIINGLCKI-KMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +RG +V YT++I LC+ K +DEA + EM AD + Y +LI G CK
Sbjct: 296 DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKW 355
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ ++++M +G+ P+ +TY ++ K + + LI+K++ +G P++ Y
Sbjct: 356 GMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIY 415
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
V++ CK+G +K+A ++ ++ G + V T+ +MI+G+ +G EA +M S
Sbjct: 416 NVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVS 475
Query: 249 SGCIPDAVTYGII 261
G I A YG +
Sbjct: 476 RG-IFSAPQYGTL 487
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 151/275 (54%), Gaps = 2/275 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F L++ALCK G+VKEA VF M ++ PN+ ++SL+ G+C ++ +AK++ M
Sbjct: 205 FGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G+ D+ +T +++G + +A+ L+N+M + + CY LI LC+ E+
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRM 323
Query: 133 D-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D A ++ EM G +++TY L+ CK +D+ +++ + ++G+ P+ TY +
Sbjct: 324 DEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQI 383
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M K + ++ E+ + + +G + ++ Y+V+I CK G EA+ L ++ME++G
Sbjct: 384 MVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P T+ I+I +G +A +EMV+R +
Sbjct: 444 SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E F +L+ VK+A V M K GLEP+ + L+D C V +A +F
Sbjct: 166 EPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M ++ +++ +T ++ G C+ + EA +L +M + D + + +L+ G
Sbjct: 226 EDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHA 284
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH-HVDRAIALIKKIEEQGIQPNMYT 187
+ DA+ L+N+M RG PNV Y L+ LC++ +D A+ + ++E G + ++ T
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT L+ G CK G + + D+ KG + TY ++ + K+ F+E L L+ KM+
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMK 404
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
GC PD + Y ++IR K GE ++A +L EM A L
Sbjct: 405 RRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 128/248 (51%), Gaps = 4/248 (1%)
Query: 41 LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAW 100
+EP + + LM + V KA ++ + M + G+ D + +++ LCK V EA
Sbjct: 165 IEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 101 SLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVL 160
+ +M +K + + SL+ G C+ + +A +++ +M G+ P+++ + LL
Sbjct: 223 KVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 161 CKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV-GRLKDAQEIFQDILIKGYNLN 219
+ + A L+ + ++G +PN+ YTVL+ LC+ R+ +A +F ++ G +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
+ TY+ +I G+CK G+ D+ ++ M G +P VTY I+ A KK + E+ +L+
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 280 EMVARSLH 287
+M R H
Sbjct: 402 KMKRRGCH 409
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 39/245 (15%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+A++ T+ L+ CK G + + +V M K+G+ P+ V+Y +M + ++ + +
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M +RG D+ Y ++I CK+ V EA L NEM + + + +I+G
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 127 KLERSFDAWKLVNEMNHRGI--PPNVITYNPLLDVLCKSH-------------------- 164
+A EM RGI P T LL+ L +
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 165 -----------------HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI 207
HV A + + E + P TY LM GL K+ A EI
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEI 578
Query: 208 FQDIL 212
+ ++
Sbjct: 579 TEKVV 583
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 157/278 (56%), Gaps = 2/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ T+N+L+ L + ++ A++VF + G P++ +Y+ L+D Y ++++
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC-YNSLIDG 124
+++ M + ++ I+I+GL K VD+A L ++ S + + T C Y LIDG
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L K R ++A +L M G PN YN L++ K+ D A AL K++ ++G++P+
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ TY+VL+D LC VGR+ + F+++ G N +V Y+++I+G K +EAL+L +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 245 KMESS-GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M++S G PD TY +I L G E+A K+ E+
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 146/273 (53%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+ +L++ALC + AK VF M +P+ V+Y +L+D + ++++ K +
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M + G DV ++TI+++ LCK EA+ L+ M + I+ + YN+LI GL ++
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R DA +L M G+ P TY +D KS A+ +K++ +GI PN+
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ L K GR ++A++IF + G + TY++M+ Y K G DEA+ L+S+M
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+GC PD + +I L+K ++A K+ M
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 149/308 (48%), Gaps = 35/308 (11%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF ILV+ALCK GN EA + VM QG+ PN+ +Y++L+ G V ++ A ++F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI----------------- 111
M GV +Y + I+ K A +M +K I
Sbjct: 422 GNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKA 481
Query: 112 ------------------IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITY 153
+ D++ YN ++ K+ +A KL++EM G P+VI
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 154 NPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
N L++ L K+ VD A + +++E ++P + TY L+ GL K G++++A E+F+ ++
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
KG N T++ + D CK AL ++ KM GC+PD TY II L K G+ ++
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 274 AEKLLREM 281
A +M
Sbjct: 662 AMCFFHQM 669
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 139/273 (50%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TF I + L + G + EA + M +G P++V+Y+ L+D C ++++ AK++F
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M D +Y +++ + +D +EM + D + + L+D LCK
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A+ ++ M +GI PN+ TYN L+ L + H +D A+ L +E G++P YTY
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
V +D K G A E F+ + KG N+ + + K G EA + ++
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G +PD+VTY ++++ K GE ++A KLL EM+
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 120/213 (56%), Gaps = 1/213 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ L K G + EAK +F M+ G PN Y+ L++G+ E + A +F M
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM 952
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ GV D+++Y+++++ LC + VDE E+ + D +CYN +I+GL K R
Sbjct: 953 VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRL 1012
Query: 132 FDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A L NEM RGI P++ TYN L+ L + V+ A + +I+ G++PN++T+
Sbjct: 1013 EEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNA 1072
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
L+ G G+ + A ++Q ++ G++ N TY
Sbjct: 1073 LIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 2/254 (0%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFA-VMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+A T NI++ L K GNV +A +++ +M + P +Y L+DG + +AK
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M+ G + Y I+ING K D A +L M + + D Y+ L+D L
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-EQGIQPN 184
C + R + E+ G+ P+V+ YN +++ L KSH ++ A+ L +++ +GI P+
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+YTY L+ L G +++A +I+ +I G NV T++ +I GY G + A +
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 245 KMESSGCIPDAVTY 258
M + G P+ TY
Sbjct: 1092 TMVTGGFSPNTGTY 1105
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N L+ L K EA V+ M+ +G P++ +YSSLM G ++++ + M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ +V ++TI I L + ++EA+ +L M + D + Y LID LC R
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT-ARK 308
Query: 132 FDAWKLVNEMNHRGI-PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
D K V E G P+ +TY LLD + +D ++E+ G P++ T+T+
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+D LCK G +A + + +G N+ TY+ +I G + D+AL L MES G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P A TY + I K G++ A + +M + +
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ + ++ K G+ A F M +G+ PNIV+ ++ + +AK IF +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ D +Y +++ K+ +DEA LL+EM D I NSLI+ L K +R
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+AWK+ M + P V+TYN LL L K+ + AI L + + ++G PN T+ L
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
D LCK + A ++ ++ G +V TY+ +I G K G EA+ +M+
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-V 673
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLL 278
PD VT ++ + K E A K++
Sbjct: 674 YPDFVTLCTLLPGVVKASLIEDAYKII 700
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 41/313 (13%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N L+ L K G ++EA +F MV++G PN +++++L D C EV A +
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ G DV +Y II GL K V EA ++M K + D + +L+ G+ K
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAS 691
Query: 130 RSFDAWKLVNE---------------------MNHRGIPPNVITYN-------------- 154
DA+K++ + GI N ++++
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDS 750
Query: 155 ---PLLDVLCKSHHVDRAIALIKKI-EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
P++ CK ++V A L +K ++ G+QP + TY +L+ GL + ++ AQ++F
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ G +V TY+ ++D Y K G DE L +M + C + +T+ I+I L K G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 271 NEKAEKLLREMVA 283
+ A L ++++
Sbjct: 871 VDDALDLYYDLMS 883
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
T N ++EAL +G ++E VF +M K+ ++ + +Y ++ + + +A
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G + SY +I+ L K + EA + M + Y+SL+ GL K
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
L+ EM G+ PNV T+ + VL ++ ++ A ++K+++++G P++ TYT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
VL+D LC +L A+E+F+ + + + TY ++D + D S+ME
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 250 GCIPDAVTYGIIIRALFKKGENEKA 274
G +PD VT+ I++ AL K G +A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEA 382
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 134/276 (48%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + T+ + ++L +G +K+A M + G N SY+ L+ + +A
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+++ M+ G +Q+Y+ ++ GL K + +D LL EM + + + + I L
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ + +A++++ M+ G P+V+TY L+D LC + +D A + +K++ +P+
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L+D L ++ + ++ G+ +V T+++++D CK G F EA +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M G +P+ TY +I L + + A +L M
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+NIL+ K G A +F MVK+G+ P++ +YS L+D C+V V++ F +
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH-SKKIIADTICYNSLIDGLCKLERS 131
+ G+ DV Y +IINGL K ++EA L NEM S+ I D YNSLI L
Sbjct: 989 ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMV 1048
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A K+ NE+ G+ PNV T+N L+ S + A A+ + + G PN TY L
Sbjct: 1049 EEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 8/245 (3%)
Query: 45 IVSYSSLMDGYCLVKEVNKAKDIF-NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
I+ YS C V+ A+ +F F GV + +Y ++I GL + M++ A +
Sbjct: 755 IIRYS------CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 104 NEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS 163
++ S I D YN L+D K + + ++L EM+ N IT+N ++ L K+
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 164 HHVDRAIALIKKI-EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT 222
+VD A+ L + ++ P TY L+DGL K GRL +A+++F+ +L G N
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 223 YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
Y+++I+G+ K G D A L +M G PD TY +++ L G ++ +E+
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 283 ARSLH 287
L+
Sbjct: 989 ESGLN 993
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + C+ +V T+N ++ L K G VKEA F M K+ + P+ V+ +L+ G
Sbjct: 635 MDMGCV-PDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASL 692
Query: 61 VNKA-KDIFNF-----------------------------------MVQRGVTHDVQSYT 84
+ A K I NF +V G+ D S
Sbjct: 693 IEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL 752
Query: 85 I-IINGLCKIKMVDEAWSLLNEMHSKKIIADTI-CYNSLIDGLCKLERSFDAWKLVNEMN 142
+ II CK V A +L + + + YN LI GL + + A + ++
Sbjct: 753 VPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVK 812
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
G P+V TYN LLD KS +D L K++ + N T+ +++ GL K G +
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 203 DAQEIFQDILI-KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
DA +++ D++ + ++ TY +IDG K G EA L M GC P+ Y I+
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 262 IRALFKKGENEKAEKLLREMV 282
I K GE + A L + MV
Sbjct: 933 INGFGKAGEADAACALFKRMV 953
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%)
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+F+ M +R + D +Y I L + +A L +M + + YN LI L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K +A ++ M G P++ TY+ L+ L K +D + L+K++E G++PN+Y
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T+T+ + L + G++ +A EI + + +G +V TY+V+ID C D A + KM
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
++ PD VTY ++ + + ++ EM
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + +++T+++LV+ LC G V E + F + + GL P++V Y+ +++G
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 61 VNKAKDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ +A +FN M RG+T D+ +Y +I L MV+EA + NE+ + + +N
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+LI G + A+ + M G PN TY L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 140/276 (50%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ + T+N L+ L V A+ VF VM ++P+IV+Y++++ GYC + KA
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M RG D +Y +I +L EM K I ++ +I GL
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK + + + + M +G PNV Y L+D KS V+ AI L+ ++ ++G +P++
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY+V+++GLCK GR+++A + F G +N YS +IDG K G DEA L +
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M GC D+ Y +I A K + ++A L + M
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 137/259 (52%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
LV+ L +V + V + + K + + ++L+ + + V + ++ M + G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ + +Y ++NGL VD A + M S +I D + YN++I G CK ++ A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+ + +M RG + ITY ++ +AL ++++E+GIQ + +++++ GL
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
CK G+L + +F++++ KG NV Y+V+IDGY K G ++A+ L+ +M G PD
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 256 VTYGIIIRALFKKGENEKA 274
VTY +++ L K G E+A
Sbjct: 398 VTYSVVVNGLCKNGRVEEA 416
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 7/272 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + +V T++++V LCK G V+EA + F GL N + YSSL+DG
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI-CYN 119
V++A+ +F M ++G T D Y +I+ K + VDEA +L M ++ T+ Y
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
L+ G+ K R+ +A KL + M +GI P + L LC S V RA ++ ++
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G+ + +++ LCK GR+K+A ++ I +G + R +VMI+ K G D A
Sbjct: 568 GVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
Query: 240 LILM-SKM----ESSGCIPDAVTYGIIIRALF 266
+ LM SK+ E G + V + ++ F
Sbjct: 627 MKLMHSKIGIGYERMGSVKRRVKFTTLLETCF 658
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%)
Query: 44 NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
N+ Y SL+D L K+V++ + + + + + V + +I K+ MV+E +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 104 NEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS 163
+M I YN L++GL A ++ M I P+++TYN ++ CK+
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 164 HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
+A+ ++ +E +G + + TY ++ ++Q++ KG + +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 224 SVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
S++I G CKEG +E + M G P+ Y ++I K G E A +LL M+
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 39/306 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ IL+ LC+ G+ +A+ +F M G P+ V++++L+DG+C + + +A ++
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G ++ Y+ +I+GL + + +A+ L M K I D I Y LI GL K +
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA KL++ M +GI P+ YN ++ LC ++ +L ++ E P+ T+T+L
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME---- 247
+ +C+ G +++A+EIF +I G + +V T++ +IDG CK G EA +L+ KME
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 248 -----------------------------------SSGCIPDAVTYGIIIRALFKKGENE 272
+G PD V+Y ++I + G+ +
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534
Query: 273 KAEKLL 278
A KLL
Sbjct: 535 GALKLL 540
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 150/274 (54%), Gaps = 1/274 (0%)
Query: 9 EVRTFNILVEALCKEG-NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V T+N+++ + +E A V+ M+K PN+ ++ LMDG + A+ +
Sbjct: 161 DVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKM 220
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F+ M RG++ + +YTI+I+GLC+ D+A L EM + D++ +N+L+DG CK
Sbjct: 221 FDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCK 280
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
L R +A++L+ G + Y+ L+D L ++ +A L + ++ I+P++
Sbjct: 281 LGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL 340
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT+L+ GL K G+++DA ++ + KG + + Y+ +I C GL +E L +M
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ PDA T+ I+I ++ + G +AE++ E+
Sbjct: 401 ETESFPDACTHTILICSMCRNGLVREAEEIFTEI 434
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 41/305 (13%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L++ CK G + EA + + K G + YSSL+DG + +A +++ M++
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC------- 126
+ + D+ YTI+I GL K +++A LL+ M SK I DT CYN++I LC
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 127 ----KLE----RSF--------------------DAWKLVNEMNHRGIPPNVITYNPLLD 158
+LE SF +A ++ E+ G P+V T+N L+D
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMY-----TYTVLMDGLCKVGRLKDAQEIFQDILI 213
LCKS + A L+ K+ E G +++ + D + + G + A
Sbjct: 452 GLCKSGELKEARLLLHKM-EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
G + ++ +Y+V+I+G+C+ G D AL L++ ++ G PD+VTY +I L + G E+
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 274 AEKLL 278
A KL
Sbjct: 571 AFKLF 575
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 9/279 (3%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F ++++ L ++ + G+ + + L+ Y + KA + F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDE-----AWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ DV +Y +I+ ++ M +E A+++ NEM + + L+DGL K
Sbjct: 155 EFDCRPDVFTYNVIL----RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R+ DA K+ ++M RGI PN +TY L+ LC+ D A L +++ G P+
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ L+DG CK+GR+ +A E+ + G+ L +R YS +IDG + + +A L + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD + Y I+I+ L K G+ E A KLL M ++ +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 147/324 (45%), Gaps = 44/324 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I ++ + IL++ L K G +++A + + M +G+ P+ Y++++ C
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ + + + M + D ++TI+I +C+ +V EA + E+ +N+
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 LIDGLCKL-----------------------------ERSFD----------AWKLVNEM 141
LIDGLCK RSFD A++ +
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHF 508
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
G P++++YN L++ C++ +D A+ L+ ++ +G+ P+ TY L++GL +VGR
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 202 KDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL-ILMSKMESSGCIPDAVTYGI 260
++A ++F + + Y ++ C++ A + M ++ C+ D
Sbjct: 569 EEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE- 625
Query: 261 IIRALFKKGENEKAEKLLREMVAR 284
I FK+GE E+A + L E+ R
Sbjct: 626 -IEQCFKEGETERALRRLIELDTR 648
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 129/302 (42%), Gaps = 75/302 (24%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI---- 67
T IL+ ++C+ G V+EA+ +F + K G P++ ++++L+DG C E+ +A+ +
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Query: 68 -------------------FNFMVQRGV----------------THDVQSYTIIINGLCK 92
F+ MV+ G + D+ SY ++ING C+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCR 529
Query: 93 IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
+D A LLN + K + D++ YN+LI+GL ++ R +A+KL + P V
Sbjct: 530 AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV-- 587
Query: 153 YNPLLDVLCKSHHV----------------------------------DRAIALIKKIEE 178
Y L+ C+ V +RA+ + +++
Sbjct: 588 YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDT 647
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ + + YT+ + GLC+ GR +A +F + K + + +I G CK D
Sbjct: 648 RKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDA 707
Query: 239 AL 240
A+
Sbjct: 708 AI 709
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 112/289 (38%), Gaps = 83/289 (28%)
Query: 10 VRTFNILVEALCKEGNVKEAK-----------------------NVFAVMVKQGL----- 41
V TFN L++ LCK G +KEA+ F MV+ G
Sbjct: 443 VATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAY 502
Query: 42 -----------EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGL 90
P+IVSY+ L++G+C +++ A + N + +G++ D +Y +INGL
Sbjct: 503 RDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Query: 91 CKIKMVDEAWSLL----NEMHSKKIIADTICYNSLIDGLCKLER---SFDAW-------- 135
++ +EA+ L + HS + Y SL+ C+ + +F+ W
Sbjct: 563 HRVGREEEAFKLFYAKDDFRHSPAV------YRSLMTWSCRKRKVLVAFNLWMKYLKKIS 616
Query: 136 -----------------------KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
+ + E++ R + Y L LC+S A+ +
Sbjct: 617 CLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMV 676
Query: 173 IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
+ E+ I + L+ GLCK +L A E+F L + L R
Sbjct: 677 FSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPR 725
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 142/278 (51%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+NIL+ LCKEG + A K+GL PN +SY+ L+ YC KE + A +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +RG D+ +Y I+I+GL +D+A ++ ++ + + D YN L+ GLCK
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R A L +EM R I P+ Y L+D +S D A + E+G++ ++ +
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ G C+ G L +A + + + TYS +IDGY K+ A+ + ME
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ C P+ VTY +I +G+ + AE+ +EM R L
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 37/308 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDG-YCLVKEVNKAKDIF 68
+ TF ++ CKEG+ + + + + ++GL ++ ++++D Y +V+ A+ I
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI- 333
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+++ DV +Y I+IN LCK + A L+E K +I + + Y LI CK
Sbjct: 334 GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKS 393
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A KL+ +M RG P+++TY L+ L S H+D A+ + K+ ++G+ P+ Y
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILI----------------------------------- 213
+LM GLCK GR A+ +F ++L
Sbjct: 454 NMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE 513
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
KG ++V ++ MI G+C+ G+ DEAL M++M +PD TY II K+ +
Sbjct: 514 KGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMAT 573
Query: 274 AEKLLREM 281
A K+ R M
Sbjct: 574 AIKIFRYM 581
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 11/287 (3%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ T+ IL+ L G++ +A N+ ++ +G+ P+ Y+ LM G C AK +F
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M+ R + D Y +I+G + DEA + + K + D + +N++I G C+
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A +N MN + P+ TY+ ++D K + AI + + +E+ +PN+ TY
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE-GLFDEALILMSKME 247
T L++G C G K A+E F+++ ++ NV TY+ +I KE ++A+ M
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 248 SSGCIPDAVTYGIIIRALFKK----------GENEKAEKLLREMVAR 284
++ C+P+ VT+ +++ KK G N L E R
Sbjct: 654 TNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 134/272 (49%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
ILV+ +C EG V+ + + +G PNIV Y++++ GYC + ++ A +F + +
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G ++++ +ING CK + LL+E+ + + N++ID + D
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+ + + P+V TYN L++ LCK + A+ + + ++G+ PN +Y L+
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
CK A ++ + +G ++ TY ++I G G D+A+ + K+ G PD
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
A Y +++ L K G A+ L EM+ R++
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 36/307 (11%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVK-QGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
++ A + G++ +A ++ +V+ P++++ +SL+ + + A+ +++ M R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G + D S I++ G+C V+ L+ K I + + YN++I G CKL +A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ------------ 182
+ + E+ +G P + T+ +++ CK + L+ +++E+G++
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 183 -----------------------PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
P++ TY +L++ LCK G+ + A + KG N
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
+Y+ +I YCK +D A L+ +M GC PD VTYGI+I L G + A +
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 280 EMVARSL 286
+++ R +
Sbjct: 440 KLIDRGV 446
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 23/254 (9%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ +++ K+ ++ A +F M K +PN+V+Y+SL++G+C + A++ F M
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEA----WSLLNEMHSKKIIADTICYNSLIDGLCK 127
R + +V +YT +I L K E W L M + K + + + +N L+ G K
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL---MMTNKCVPNEVTFNCLLQGFVK 673
Query: 128 LER----------SFDAWKLVNEMNHR----GIPPNVITYNPLLDVLCKSHHVDRAIALI 173
+ L +E HR G + YN L LC V A
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI-FQDILIKGYNLNVRTYSVMIDGYCK 232
K+ ++G P+ ++ ++ G C VG K + + F ++ KG + VR YS +++ +
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVR-YSQVLEQHLP 792
Query: 233 EGLFDEALILMSKM 246
+ + EA ++ M
Sbjct: 793 QPVICEASTILHAM 806
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 148/274 (54%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M ++ ++ T+N LV C+ GN++E +V ++ GLE N V+Y++L+ C +
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ ++I N M Q V +Y I+INGLCK +++ A +M +K + D + YN+
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ + K DA +L+ + + PP +ITYN ++D L K + +A+ L ++ + G
Sbjct: 390 VLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I P+ T L+ G C+ +++A ++ ++ +G + TY ++I G CK+ + A+
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ M + GC PD Y I++ + + G +A
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +LVE +C+ A V M +G P+IV+Y+SL++ C + + + +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ + +Y +++ LC + DE +LN M+ I YN LI+GLCK
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A +M + P+++TYN +L + K VD AI L+ ++ P + TY +
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DGL K G +K A E++ +L G + T +I G+C+ L +EA ++ + + G
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN 485
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
TY ++I+ L KK E E A +++ M+
Sbjct: 486 GIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLT 517
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N ++ LC G + +A + VM + P+ S S+L+ G + +++KA I M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V G D +Y +II LCK + A LL +M D I YN++I + +
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A + + G PP +ITY L++++C+ RAI +++ + +G P++ TY L
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSL 285
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ C+ G L++ + Q IL G LN TY+ ++ C +DE +++ M +
Sbjct: 286 VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSY 345
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P +TY I+I L K +A +M+ +
Sbjct: 346 CPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 143/285 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L +V T+N ++ + GN ++A + ++ G P +++Y+ L++ C
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+A ++ M G D+ +Y ++N C+ ++E S++ + S + +T+ YN+
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ LC E + +++N M P VITYN L++ LCK+ + RAI ++ EQ
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ TY ++ + K G + DA E+ + + TY+ +IDG K+GL +AL
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
L +M +G PD +T +I + E+A ++L+E R
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 140/271 (51%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N+++ LCK+G+++ A + M G P++++Y++++ +A +
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+Q G + +YT+++ +C+ A +L +M + D + YNSL++ C+
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ ++ + G+ N +TYN LL LC + D ++ + + P + TY +L
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNIL 355
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++GLCK L A + F +L + ++ TY+ ++ KEG+ D+A+ L+ ++++ C
Sbjct: 356 INGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCC 415
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
P +TY +I L KKG +KA +L +M+
Sbjct: 416 PPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%)
Query: 49 SSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS 108
+ ++ C ++ A + M + S + ++ GL +I +D+A +L M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 109 KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
+ DTI YN +I LCK A L+ +M+ G PP+VITYN ++ + + ++
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
AI K + G P M TYTVL++ +C+ A E+ +D+ ++G ++ TY+ +++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
C+ G +E ++ + S G + VTY ++ +L ++ E++L M S
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 103/209 (49%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
+D ++ I++ LC + +A L+ M + ++L+ GL ++++ A +
Sbjct: 102 NDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCI 161
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
+ M G P+ ITYN ++ LCK H+ A+ L++ + G P++ TY ++ +
Sbjct: 162 LRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G + A ++D L G + TY+V+++ C+ A+ ++ M GC PD VT
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
Y ++ ++G E+ +++ +++ L
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGL 310
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 140 bits (354), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV RTFN+L+ + + G K+A F P SY+++++ VK+
Sbjct: 175 MVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQ 234
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ ++ M++ G + DV +Y I++ ++ +D L +EM D+ YN
Sbjct: 235 YKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI 294
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ L K + A +N M GI P+V+ Y L+D L ++ +++ + ++ + G
Sbjct: 295 LLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 354
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+P++ YTV++ G G L A+E+F+++ +KG NV TY+ MI G C G F EA
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 414
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
L+ +MES GC P+ V Y ++ L K G+ +A K++REMV +
Sbjct: 415 WLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ +V T+NIL+ + G + +F M + G P+ +Y+ L+ ++ +
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLH---ILGK 301
Query: 61 VNK---AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
NK A N M + G+ V YT +I+GL + ++ L+EM D +C
Sbjct: 302 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVC 361
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
Y +I G A ++ EM +G PNV TYN ++ LC + A L+K++E
Sbjct: 362 YTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+G PN Y+ L+ L K G+L +A+++ ++++ KG+
Sbjct: 422 SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%)
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
W+LV+EM G P T+N L+ ++ +A+ K + +P ++Y +++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
L V + K + +++ +L G++ +V TY++++ + G D L +M G PD
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREM 281
+ TY I++ L K + A L M
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHM 315
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 149/312 (47%), Gaps = 40/312 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NIL+ K G ++EA+ M + G S++ L++GYC + A + + M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ +Y I I LC +D+A LL+ M + D + YN+L+ G K+ +
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKF 390
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A L +++ I P+++TYN L+D LC+S +++ A L +++ Q I P++ TYT L
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Query: 192 MDGLCKVGRLKDAQEIFQDILIKG-----YNLNVRT------------------------ 222
+ G K G L A E++ ++L KG Y R
Sbjct: 451 VKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 223 -------YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
Y+V IDG CK G +A+ K+ G +PD VTY +IR + G+ + A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 276 KLLREMVARSLH 287
L EM+ + L+
Sbjct: 571 NLYDEMLRKRLY 582
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%), Gaps = 4/286 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + VR NI+++ L + +A V+ M++ G+ P ++++++++D +
Sbjct: 194 MIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD 253
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ + I+ M +R + +Y I+ING K ++EA +M +N
Sbjct: 254 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNP 313
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+G CK DAW + +EM + GI P TYN + LC +D A L+ +
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA--- 370
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P++ +Y LM G K+G+ +A +F D+ + ++ TY+ +IDG C+ G + A
Sbjct: 371 -APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L +M + PD +TY +++ K G A ++ EM+ + +
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I V TFN ++++ K G+++ ++ M ++ +E + V+Y+ L++G+ +
Sbjct: 229 MIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGK 288
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+ M + G S+ +I G CK + D+AW + +EM + I T YN
Sbjct: 289 MEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNI 348
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
I LC R DA +L++ M P+V++YN L+ K A L +
Sbjct: 349 YICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I P++ TY L+DGLC+ G L+ AQ + +++ + +V TY+ ++ G+ K G A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ +M G PD Y + G+++KA +L EMVA H
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 139/311 (44%), Gaps = 40/311 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+FN L+E CK+G +A V M+ G+ P +Y+ + C ++ A+++ + M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
DV SY +++G K+ EA L +++ + I + YN+LIDGLC+
Sbjct: 370 A----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT-- 189
A +L EM + I P+VITY L+ K+ ++ A + ++ +GI+P+ Y YT
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTR 485
Query: 190 ----------------------------------VLMDGLCKVGRLKDAQEIFQDILIKG 215
V +DGLCKVG L A E + I G
Sbjct: 486 AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+ TY+ +I GY + G F A L +M P +TY ++I K G E+A
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 276 KLLREMVARSL 286
+ EM R +
Sbjct: 606 QYSTEMKKRGV 616
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 146/286 (51%), Gaps = 5/286 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M Q I +V T+ LV+ K GN+ A V+ M+++G++P+ +Y++ G + +
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 61 VNKAKDIFNFMVQRGVTH---DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
+KA + MV H D+ Y + I+GLCK+ + +A ++ ++ D +
Sbjct: 495 SDKAFRLHEEMV--ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
Y ++I G + + A L +EM + + P+VITY L+ K+ +++A +++
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
++G++PN+ T+ L+ G+CK G + +A + +G N +Y+++I C ++
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
E + L +M PD T+ + + L K E+ + E L R +++
Sbjct: 673 EVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLLS 718
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 141/263 (53%), Gaps = 3/263 (1%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSY 83
G +EA +F + + GLE N S + L+D C K V +A+ + ++ +T + ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTF 227
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
I I+G CK V+EA + EM I Y ++I C+ +++++EM
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
G PPN ITY ++ L + A+ + +++ G +P+ Y L+ L + GRL++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 204 AQEIFQ-DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG-CIPDAVTYGII 261
A+ +F+ ++ G ++N TY+ MI YC D+A+ L+ +MESS C PD TY +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 262 IRALFKKGENEKAEKLLREMVAR 284
+R+ FK+G+ + KLL+EMV +
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTK 430
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I TFNI + CK V+EA M G P ++SY++++ YC E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + M G + +YT I++ L K +EA + M D++ YN LI L
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 126 CKLERSFDAWKLVN-EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI-QP 183
+ R +A ++ EM G+ N TYN ++ + C D+AI L+K++E + P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALIL 242
+++TY L+ K G + + ++ ++++ K + +L+ TY+ +I C+ + + A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
+M S P T +++ + KK +E AE++
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 141/263 (53%), Gaps = 3/263 (1%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSY 83
G +EA +F + + GLE N S + L+D C K V +A+ + ++ +T + ++
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTF 227
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
I I+G CK V+EA + EM I Y ++I C+ +++++EM
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
G PPN ITY ++ L + A+ + +++ G +P+ Y L+ L + GRL++
Sbjct: 288 NGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEE 347
Query: 204 AQEIFQ-DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG-CIPDAVTYGII 261
A+ +F+ ++ G ++N TY+ MI YC D+A+ L+ +MESS C PD TY +
Sbjct: 348 AERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPL 407
Query: 262 IRALFKKGENEKAEKLLREMVAR 284
+R+ FK+G+ + KLL+EMV +
Sbjct: 408 LRSCFKRGDVVEVGKLLKEMVTK 430
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I TFNI + CK V+EA M G P ++SY++++ YC E K
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + M G + +YT I++ L K +EA + M D++ YN LI L
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTL 339
Query: 126 CKLERSFDAWKLVN-EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI-QP 183
+ R +A ++ EM G+ N TYN ++ + C D+AI L+K++E + P
Sbjct: 340 ARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNP 399
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALIL 242
+++TY L+ K G + + ++ ++++ K + +L+ TY+ +I C+ + + A L
Sbjct: 400 DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCL 459
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
+M S P T +++ + KK +E AE++
Sbjct: 460 FEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 131/247 (53%), Gaps = 3/247 (1%)
Query: 42 EPNIVS--YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
+P VS +S LM Y +N + +F + G+ +Q+ T+++N L K ++ D
Sbjct: 128 DPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTV 187
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
W + +M ++A+ YN L+ K A KL++EM +G+ P++ TYN L+ V
Sbjct: 188 WKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
CK A+++ ++E G+ PN+ TY + G + GR+++A +F++I N
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTAN 306
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
TY+ +IDGYC+ DEAL L MES G P VTY I+R L + G +A +LL
Sbjct: 307 HVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 280 EMVARSL 286
EM + +
Sbjct: 367 EMSGKKI 373
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 36/321 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEA---------KNVFA----------------- 34
MV + A + +N+LV A K G+ ++A K VF
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 35 ---------VMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
M + G+ PNIV+Y+S + G+ + +A +F ++ VT + +YT
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTT 312
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+I+G C++ +DEA L M S+ + YNS++ LC+ R +A +L+ EM+ +
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
I P+ IT N L++ CK + A+ + KK+ E G++ +MY+Y L+ G CKV L++A+
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
E ++ KG++ TYS ++DG+ + DE L+ + E G D Y +IR +
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRI 492
Query: 266 FKKGENEKAEKLLREMVARSL 286
K + + A+ L M + L
Sbjct: 493 CKLEQVDYAKVLFESMEKKGL 513
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 1/275 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N + +EG ++EA +F +K + N V+Y++L+DGYC + ++++A + M
Sbjct: 275 TYNSFIHGFSREGRMREATRLFR-EIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVM 333
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
RG + V +Y I+ LC+ + EA LL EM KKI D I N+LI+ CK+E
Sbjct: 334 ESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDM 393
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A K+ +M G+ ++ +Y L+ CK ++ A + + E+G P TY+ L
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG + + ++ ++ +G +V Y +I CK D A +L ME G
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ D+V + + A ++ G+ +A L M R L
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 139/274 (50%), Gaps = 1/274 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+ L+ K G + ++ VF + GL+P++ + + L++ + + IF MV
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ GV ++ Y ++++ K ++A LL+EM K + D YN+LI CK F
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A + + M G+ PN++TYN + + + A L ++I++ + N TYT L+
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLI 314
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DG C++ + +A + + + +G++ V TY+ ++ C++G EA L+++M
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
PD +T +I A K + A K+ ++M+ L
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGL 408
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 114/222 (51%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N ++ LC++G ++EA + M + +EP+ ++ ++L++ YC ++++ A +
Sbjct: 342 VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKK 401
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M++ G+ D+ SY +I+G CK+ ++ A L M K Y+ L+DG
Sbjct: 402 KMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQN 461
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ + KL+ E RG+ +V Y L+ +CK VD A L + +E++G+ + +T
Sbjct: 462 KQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFT 521
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC 231
+ + G++ +A +F + + +N++ Y + Y
Sbjct: 522 TMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYA 563
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ ++ L+ CK ++ AK M+++G P +YS L+DG+ +
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ + +RG+ DV Y +I +CK++ VD A L M K ++ D++ + +
Sbjct: 463 QDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTT 522
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+ + + +A L + M +R + N+ Y +
Sbjct: 523 MAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 146/281 (51%), Gaps = 1/281 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T N +V +C+ + A F M K+G++ N+V+Y +L+ C V V KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M++ G + D + Y +I+GLC+++ +A ++ ++ D + YN LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + ++++ +M G P+ ITYN L+ K + +++++ E G+ P +
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDI-LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY ++D C VG L +A ++F+D+ L N N Y+++I+ + K G F +AL L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+M+ P+ TY + + L +K + E KL+ EMV +S
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 1/271 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L++ C+ G ++ AK V + M + ++PN+V+ ++++ G C +N A F M
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ GV +V +Y +I+ C + V++A +M D Y +LI GLC++ R
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA ++V ++ G +++ YN L+ + C ++ ++ ++ +E++G +P+ TY L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME-SSG 250
+ K + + + + + G + V TY +ID YC G DEAL L M S
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK 647
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P+ V Y I+I A K G +A L EM
Sbjct: 648 VNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVS-----YSSLMDGYCLVK 59
I +V T IL+ LCK V EA VF M K+ + N++ +++L+DG C V
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 EVNKAKDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
+ +A+++ M ++ + +Y +I+G C+ ++ A +++ M +I + +
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N+++ G+C+ A +M G+ NV+TY L+ C +V++A+ +K+ E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
G P+ Y L+ GLC+V R DA + + + G++L++ Y+++I +C + ++
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEK 564
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+++ ME G PD++TY +I K + E E+++ +M
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+ + V T+ L+ A C NV++A + M++ G P+ Y +L+ G C V+ +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A + + + G + D+ +Y ++I C ++ + +L +M + D+I YN+LI
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-EQGIQ 182
K + +++ +M G+ P V TY ++D C +D A+ L K + +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
PN Y +L++ K+G A + +++ +K NV TY+ + ++ + L L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
M +M C P+ +T I++ L E K K ++
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 121/235 (51%), Gaps = 17/235 (7%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYT--IIINGLCKIKMVDEA--WSLLNEMHSKKIIADTI 116
V+ A + + M+Q+ T I+++ + K +++ E +L++ S + +++
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSV 260
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
I LCK R+ AW +++++ P +N LL L ++ + R L+ K+
Sbjct: 261 WLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI---------LIKGYNLNVRTYSVMI 227
+E I+P++ T +L++ LCK R+ +A E+F+ + +IK +++ ++ +I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH---FNTLI 377
Query: 228 DGYCKEGLFDEALILMSKME-SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
DG CK G EA L+ +M+ C P+AVTY +I + G+ E A++++ M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 150/281 (53%), Gaps = 14/281 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ E + L+ A C+ NV++A+ F ++V + + P++ +Y+ +++ YC + E +A
Sbjct: 596 VEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAY 655
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M +R V DV +Y++++N D + EM + +I D + Y +I+
Sbjct: 656 ALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRY 708
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C L + L +M R I P+V+TY LL + +R ++ ++++ ++P++
Sbjct: 709 CHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-----KNKPERNLS--REMKAFDVKPDV 761
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ YTVL+D CK+G L +A+ IF ++ G + + Y+ +I CK G EA ++ +
Sbjct: 762 FYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDR 821
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M SG PD V Y +I + G KA KL++EM+ + +
Sbjct: 822 MIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 135/276 (48%), Gaps = 6/276 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
ID +V ++ ++E K N+ +A +VF M+K+ N V SS++ YC + ++A
Sbjct: 322 IDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAY 381
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+F + ++ D Y + + L K+ V+EA L EM K I D I Y +LI G
Sbjct: 382 DLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC 441
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + DA+ L+ EM+ G P+++ YN L L + A +K +E +G++P
Sbjct: 442 CLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTY 501
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ ++++GL G L A+ ++ + K + + M+ G+C G D A +
Sbjct: 502 VTHNMVIEGLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIR 557
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+E +P +V + + +K KA+ LL M
Sbjct: 558 LEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ +V LC E +++A++V M K G++P++ YS++++G+ + KA D+FN M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+++ + + I+ C++ EA+ L E I D +CYN D L KL +
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L EM +GI P+VI Y L+ C A L+ +++ G P++ Y VL
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
GL G ++A E + + +G T++++I+G G D+A +E
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSR 532
Query: 252 IPDA 255
DA
Sbjct: 533 ENDA 536
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%)
Query: 46 VSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNE 105
++Y ++ G C + A+ + M + G+ DV Y+ II G K + +A + N+
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
M K+ + + +S++ C++ +A+ L E I + + YN D L K
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
V+ AI L +++ +GI P++ YT L+ G C G+ DA ++ ++ G ++ Y+V
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+ G GL EA + ME+ G P VT+ ++I L GE +KAE + +S
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVF-AVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+R LV+A EA ++F G P+I + + L+ + F
Sbjct: 146 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ + G+ D +Y +++ L + +E LL+ + + + Y + I+GLC
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 265
Query: 129 ERSFDAWKLVNEMNHRGIPPNV----ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
+ + A+ L+ + I + I Y ++ LC ++ A +++ +E+ GI P+
Sbjct: 266 QMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 325
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+Y Y+ +++G K + A ++F +L K +N S ++ YC+ G F EA L
Sbjct: 326 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFK 385
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + D V Y + AL K G+ E+A +L REM + +
Sbjct: 386 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGI 427
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%)
Query: 27 KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
K +N+ M ++P++ Y+ L+D C + ++ +AK IF+ M++ GV D YT +
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
I CK+ + EA + + M + D + Y +LI G C+ A KLV EM +GI
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 147 PPN 149
P
Sbjct: 863 KPT 865
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 146/281 (51%), Gaps = 1/281 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T N +V +C+ + A F M K+G++ N+V+Y +L+ C V V KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M++ G + D + Y +I+GLC+++ +A ++ ++ D + YN LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + ++++ +M G P+ ITYN L+ K + +++++ E G+ P +
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDI-LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY ++D C VG L +A ++F+D+ L N N Y+++I+ + K G F +AL L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+M+ P+ TY + + L +K + E KL+ EMV +S
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 134 bits (337), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+C+ V T+N L++ C+ G ++ AK V + M + ++PN+V+ ++++ G C +N
Sbjct: 401 RCVPNAV-TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A F M + GV +V +Y +I+ C + V++A +M D Y +LI
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
GLC++ R DA ++V ++ G +++ YN L+ + C ++ ++ ++ +E++G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ TY L+ K + + + + + G + V TY +ID YC G DEAL L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 244 SKME-SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M S P+ V Y I+I A K G +A L EM
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVS-----YSSLMDGYCLVK 59
I +V T IL+ LCK V EA VF M K+ + N++ +++L+DG C V
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 EVNKAKDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
+ +A+++ M ++ + +Y +I+G C+ ++ A +++ M +I + +
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N+++ G+C+ A +M G+ NV+TY L+ C +V++A+ +K+ E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
G P+ Y L+ GLC+V R DA + + + G++L++ Y+++I +C + ++
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+++ ME G PD++TY +I K + E E+++ +M
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+ +LCK A ++ + ++K +++L+ ++++ D+ M +
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK------IIADTICYNSLIDGLCKLE 129
+ DV + I+IN LCK + VDEA + +M K+ I AD+I +N+LIDGLCK+
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 130 RSFDAWKLVNEMN-HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R +A +L+ M PN +TYN L+D C++ ++ A ++ +++E I+PN+ T
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ G+C+ L A F D+ +G NV TY +I C ++A+ KM
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 249 SGCIPDAVTYGIIIRAL 265
+GC PDA Y +I L
Sbjct: 505 AGCSPDAKIYYALISGL 521
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+ + V T+ L+ A C NV++A + M++ G P+ Y +L+ G C V+ +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A + + + G + D+ +Y ++I C ++ + +L +M + D+I YN+LI
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-EQGIQ 182
K + +++ +M G+ P V TY ++D C +D A+ L K + +
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
PN Y +L++ K+G A + +++ +K NV TY+ + ++ + L L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
M +M C P+ +T I++ L E K K ++
Sbjct: 710 MDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 144/272 (52%), Gaps = 23/272 (8%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLVKEVNKA 64
+++VR N++V+ L + G V +A V M+++ PN ++ ++ + + +
Sbjct: 184 NSQVR--NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 65 KDIFNFMVQRGVTHDVQSYTI----IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
K I ++ R +H V ++ I+ LCK + AW +L+++ K + +N+
Sbjct: 242 KIIA--LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 121 LIDGLCKLERSFDAWK---LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
L+ C L R+ D + LV +M+ I P+V+T L++ LCKS VD A+ + +++
Sbjct: 300 LLS--C-LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 178 EQG------IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL-NVRTYSVMIDGY 230
+ I+ + + L+DGLCKVGRLK+A+E+ + ++ + N TY+ +IDGY
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
C+ G + A ++S+M+ P+ VT I+
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 122/235 (51%), Gaps = 17/235 (7%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYT--IIINGLCKIKMVDEA--WSLLNEMHSKKIIADTI 116
V+ A + + M+Q+ T I+++ + K +++ E +L++ S + +++
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
I LCK R+ AW +++++ P +N LL L ++ + R L+ K+
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI---------LIKGYNLNVRTYSVMI 227
+E I+P++ T +L++ LCK R+ +A E+F+ + +IK +++ ++ +I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH---FNTLI 377
Query: 228 DGYCKEGLFDEALILMSKME-SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
DG CK G EA L+ +M+ C+P+AVTY +I + G+ E A++++ M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 140/274 (51%), Gaps = 1/274 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC-LVKEVNKAKDI 67
+V ++ L+ A G +EA NVF M + G +P +++Y+ +++ + + NK +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M G+ D +Y +I + + EA + EM + D + YN+L+D K
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A K++NEM G P+++TYN L+ + +D A+ L ++ E+G +P+++T
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT L+ G + G+++ A IF+++ G N+ T++ I Y G F E + + ++
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G PD VT+ ++ + G + + + +EM
Sbjct: 447 VCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNV-KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
I + T+N L+ CK G++ +EA VF M G + V+Y++L+D Y +A
Sbjct: 275 IAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ N MV G + + +Y +I+ + M+DEA L N+M K D Y +L+ G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
+ + A + EM + G PN+ T+N + + + + +I G+ P+
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ T+ L+ + G + +F+++ G+ T++ +I Y + G F++A+ +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M +G PD TY ++ AL + G E++EK+L EM
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 131/253 (51%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L++ K KEA V MV G P+IV+Y+SL+ Y +++A ++ N M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G DV +YT +++G + V+ A S+ EM + + +N+ I +
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ K+ +E+N G+ P+++T+N LL V ++ + K+++ G P T+ L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ + G + A +++ +L G ++ TY+ ++ + G+++++ ++++ME C
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 252 IPDAVTYGIIIRA 264
P+ +TY ++ A
Sbjct: 556 KPNELTYCSLLHA 568
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 47/318 (14%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ T+N L+ + G E VF M + G P ++++L+ Y +A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI--- 122
++ M+ GVT D+ +Y ++ L + M +++ +L EM + + + Y SL+
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 123 --------------------------------------DGLCKLERSFDAWKLVNEMNHR 144
D L + ER+F +E+ R
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAF------SELKER 623
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
G P++ T N ++ + + V +A ++ ++E+G P+M TY LM + +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+EI ++IL KG ++ +Y+ +I YC+ +A + S+M +SG +PD +TY I +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 265 LFKKGENEKAEKLLREMV 282
E+A ++R M+
Sbjct: 744 YAADSMFEEAIGVVRYMI 761
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 142/285 (49%), Gaps = 8/285 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ T+N ++ AL + G ++++ V A M +PN ++Y SL+ Y KE
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGL----CKIKMVDEAWSLLNEMHSKKIIADTI 116
+ + + + + + ++ +++ L K ++ EA +E+ + D
Sbjct: 575 IG----LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDIT 630
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
NS++ + + A +++ M RG P++ TYN L+ + +S ++ ++++I
Sbjct: 631 TLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI 690
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+GI+P++ +Y ++ C+ R++DA IF ++ G +V TY+ I Y + +F
Sbjct: 691 LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMF 750
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+EA+ ++ M GC P+ TY I+ K ++A+ + ++
Sbjct: 751 EEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 39/271 (14%)
Query: 50 SLMDGYCLVKEVNKAKDIFN-FMVQRGVTH--DVQSYTIIINGLCKIKMVDEAWSLLNEM 106
+ + G K+ + A F+ FM Q+ D III+ L K V A ++ N +
Sbjct: 140 AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGL 199
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCK-SHH 165
D Y SLI R +A + +M G P +ITYN +L+V K
Sbjct: 200 QEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTV----------------------------------- 190
++ +L++K++ GI P+ YTY
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+D K R K+A ++ ++++ G++ ++ TY+ +I Y ++G+ DEA+ L ++M G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD TY ++ + G+ E A + EM
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ EA+ F+ + ++G P+I + +S++ Y + V KA + ++M +RG T + +Y
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
++ + ++ +L E+ +K I D I YN++I C+ R DA ++ +EM + G
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
I P+VITYN + + AI +++ + + G +PN
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ-------------------- 769
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
TY+ ++DGYCK DEA + + + +
Sbjct: 770 ---------------NTYNSIVDGYCKLNRKDEAKLFVEDLRN 797
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/356 (18%), Positives = 141/356 (39%), Gaps = 70/356 (19%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MVL + T+N L+ A ++G + EA + M ++G +P++ +Y++L+ G+ +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 61 VNKAKDIFNFMVQRG-----------------------------------VTHDVQSYTI 85
V A IF M G ++ D+ ++
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
++ + M E + EM + + +N+LI + A + M G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC--------- 196
+ P++ TYN +L L + +++ ++ ++E+ +PN TY L+
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 197 --------------------------KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
K L +A+ F ++ +G++ ++ T + M+ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + +A ++ M+ G P TY ++ + + K+E++LRE++A+ +
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ + + +++ + ++ +G++P+I+SY++++ YC + A IF+ M
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ DV +Y I M +EA ++ M + YNS++DG CKL R
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Query: 132 FDAWKLVNEMNHRGIPPNV 150
+A V ++ R + P+
Sbjct: 786 DEAKLFVEDL--RNLDPHA 802
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 151/281 (53%), Gaps = 13/281 (4%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV ++ + T +I V +LC+ G V EAK++ + ++ P+ +Y+ L+ C K+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 61 -------VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA 113
V++ +D F+ V D+ S+TI+I+ +C K + EA L++++ +
Sbjct: 210 LHVVYEFVDEMRDDFD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D YN+++ G C L + +A + +M G+ P+ ITYN L+ L K+ V+ A +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
K + + G +P+ TYT LM+G+C+ G A + +++ +G N TY+ ++ G CK
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKA 383
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
L D+ + L M+SSG ++ Y ++R+L K G+ +A
Sbjct: 384 RLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 137/259 (52%), Gaps = 3/259 (1%)
Query: 12 TFNILVEALCK--EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
TF IL+ C+ + ++ V +MV GLEP+ V+ + C V++AKD+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKL 128
+ ++ D +Y ++ LCK K + + ++EM + D + + LID +C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +A LV+++ + G P+ YN ++ C A+ + KK++E+G++P+ TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ GL K GR+++A+ + ++ GY + TY+ +++G C++G AL L+ +ME+
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 249 SGCIPDAVTYGIIIRALFK 267
GC P+ TY ++ L K
Sbjct: 364 RGCAPNDCTYNTLLHGLCK 382
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 110/203 (54%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ +F IL++ +C N++EA + + + G +P+ Y+++M G+C + + ++A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ M + GV D +Y +I GL K V+EA L M DT Y SL++G+
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ S A L+ EM RG PN TYN LL LCK+ +D+ + L + ++ G++
Sbjct: 346 CRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES 405
Query: 186 YTYTVLMDGLCKVGRLKDAQEIF 208
Y L+ L K G++ +A E+F
Sbjct: 406 NGYATLVRSLVKSGKVAEAYEVF 428
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%), Gaps = 1/219 (0%)
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ N MV G+ D + I + LC+ VDEA L+ E+ K DT YN L+ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 127 KLERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + ++ V+EM + + P+++++ L+D +C S ++ A+ L+ K+ G +P+
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ Y +M G C + + +A +++ + +G + TY+ +I G K G +EA + +
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
M +G PD TY ++ + +KGE+ A LL EM AR
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEAR 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 59/121 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+ L+ +C++G A ++ M +G PN +Y++L+ G C +
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++K +++ M GV + Y ++ L K V EA+ + + K ++D Y++
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 121 L 121
L
Sbjct: 446 L 446
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 137 bits (345), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 1/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V T N +V +C+ + A F M K+G++ N+V+Y +L+ C V V KA
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M++ G + D + Y +I+GLC+++ +A ++ ++ D + YN LI
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + ++++ +M G P+ ITYN L+ K + +++++ E G+ P +
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDI-LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY ++D C VG L +A ++F+D+ L N N Y+++I+ + K G F +AL L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+M+ P+ TY + + L +K + E KL+ EMV
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 2/279 (0%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+C+ V T+N L++ C+ G ++ AK V + M + ++PN+V+ ++++ G C +N
Sbjct: 401 RCVPNAV-TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A F M + GV +V +Y +I+ C + V++A +M D Y +LI
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
GLC++ R DA ++V ++ G +++ YN L+ + C ++ ++ ++ +E++G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ TY L+ K + + + + + G + V TY +ID YC G DEAL L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 244 SKME-SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M S P+ V Y I+I A K G +A L EM
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVS-----YSSLMDGYCLVK 59
I +V T IL+ LCK V EA VF M K+ + N++ +++L+DG C V
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 60 EVNKAKDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
+ +A+++ M ++ + +Y +I+G C+ ++ A +++ M +I + +
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N+++ G+C+ A +M G+ NV+TY L+ C +V++A+ +K+ E
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
G P+ Y L+ GLC+V R DA + + + G++L++ Y+++I +C + ++
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+++ ME G PD++TY +I K + E E+++ +M
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 7/257 (2%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+ +LCK A ++ + ++K +++L+ ++++ D+ M +
Sbjct: 265 FISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVK 324
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK------IIADTICYNSLIDGLCKLE 129
+ DV + I+IN LCK + VDEA + +M K+ I AD+I +N+LIDGLCK+
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 130 RSFDAWKLVNEMN-HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R +A +L+ M PN +TYN L+D C++ ++ A ++ +++E I+PN+ T
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ G+C+ L A F D+ +G NV TY +I C ++A+ KM
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 249 SGCIPDAVTYGIIIRAL 265
+GC PDA Y +I L
Sbjct: 505 AGCSPDAKIYYALISGL 521
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 144/272 (52%), Gaps = 23/272 (8%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQG--LEPNIVSYSSLMDGYCLVKEVNKA 64
+++VR N++V+ L + G V +A V M+++ PN ++ ++ + + +
Sbjct: 184 NSQVR--NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE 241
Query: 65 KDIFNFMVQRGVTHDVQSYTI----IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
K I ++ R +H V ++ I+ LCK + AW +L+++ K + +N+
Sbjct: 242 KIIA--LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 121 LIDGLCKLERSFDAWK---LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
L+ C L R+ D + LV +M+ I P+V+T L++ LCKS VD A+ + +++
Sbjct: 300 LLS--C-LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 178 EQG------IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL-NVRTYSVMIDGY 230
+ I+ + + L+DGLCKVGRLK+A+E+ + ++ + N TY+ +IDGY
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
C+ G + A ++S+M+ P+ VT I+
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIV 448
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 122/235 (51%), Gaps = 17/235 (7%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYT--IIINGLCKIKMVDEA--WSLLNEMHSKKIIADTI 116
V+ A + + M+Q+ T I+++ + K +++ E +L++ S + +++
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
I LCK R+ AW +++++ P +N LL L ++ + R L+ K+
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKM 320
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI---------LIKGYNLNVRTYSVMI 227
+E I+P++ T +L++ LCK R+ +A E+F+ + +IK +++ ++ +I
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH---FNTLI 377
Query: 228 DGYCKEGLFDEALILMSKME-SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
DG CK G EA L+ +M+ C+P+AVTY +I + G+ E A++++ M
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 3/170 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+N+L+ C + N ++ + M K+G +P+ ++Y++L+ + K+ + + M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM--HSKKIIADTICYNSLIDGLCKLE 129
+ G+ V +Y +I+ C + +DEA L +M HSK + +T+ YN LI+ KL
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLG 666
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
A L EM + + PNV TYN L L + + + L+ ++ E
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEH 716
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 141/277 (50%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ F I+ A + EA F MV+ G++P + L+ C K VN A++ F
Sbjct: 139 KVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK 198
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
G+ ++Y+I++ G +I+ A + +EM + + D + YN+L+D LCK
Sbjct: 199 AKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGD 258
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+K+ EM + G+ P+ ++ + C + V A ++ +++ + PN+YT+
Sbjct: 259 VDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNH 318
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
++ LCK ++ DA + +++ KG N + TY+ ++ +C + A L+S+M+ +
Sbjct: 319 IIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK 378
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
C+PD TY ++++ L + G ++A ++ M R +
Sbjct: 379 CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 139/273 (50%), Gaps = 1/273 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+T++ILV + + A+ VF M+++ ++++Y++L+D C +V+ +F
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M G+ D S+ I I+ C V A+ +L+ M ++ + +N +I LCK E
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ DA+ L++EM +G P+ TYN ++ C V+RA L+ +++ P+ +TY
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN 387
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC-KEGLFDEALILMSKMES 248
+++ L ++GR A EI++ + + + V TY+VMI G K+G +EA M
Sbjct: 388 MVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMID 447
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P + T ++ L G+ + + L +M
Sbjct: 448 EGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 2/242 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+N L++ALCK G+V +F M GL+P+ S++ + YC +V+ A + + M
Sbjct: 245 AYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRM 304
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ + +V ++ II LCK + VD+A+ LL+EM K DT YNS++ C
Sbjct: 305 KRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEV 364
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A KL++ M+ P+ TYN +L +L + DRA + + + E+ P + TYTV+
Sbjct: 365 NRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVM 424
Query: 192 MDGLC-KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME-SS 249
+ GL K G+L++A F+ ++ +G T ++ + G D +L KME SS
Sbjct: 425 IHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Query: 250 GC 251
C
Sbjct: 485 SC 486
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 125/228 (54%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + TFN+++ C+ G V+ AK + M K G PN+ +YS+LM+G+C V ++ +AK
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F+ + + G+ D YT ++N C+ DEA LL EM + + ADT+ YN ++ GL
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
RS +A +++++ G+ N +Y +L+ LC + +++A+ + + E+GI P+
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH 443
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
T+ L+ LC+ G + + L G +++ +++ CKE
Sbjct: 444 ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 155/265 (58%), Gaps = 5/265 (1%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQSYT 84
V E N+ V+ + ++P++ + S+ ++ EVN ++ + + G+ + +
Sbjct: 143 VMEMFNLIQVIAR--VKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKI-IADTICYNSLIDGLCKLERSFDAWKLVNEM-N 142
I++ CK ++ A+ ++ EM I ++I Y++L+D L RS +A +L +M +
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
GI P+ +T+N +++ C++ V+RA ++ +++ G PN+Y Y+ LM+G CKVG+++
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
+A++ F ++ G L+ Y+ +++ +C+ G DEA+ L+ +M++S C D +TY +I+
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 263 RALFKKGENEKAEKLLREMVARSLH 287
R L +G +E+A ++L + + +H
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVH 405
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 141/268 (52%), Gaps = 2/268 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLE-PNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
FNILV+ CK G++ A V M + G+ PN ++YS+LMD +A ++F M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 72 VQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ + G++ D ++ ++ING C+ V+ A +L+ M + Y++L++G CK+ +
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGK 318
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A + +E+ G+ + + Y L++ C++ D A+ L+ +++ + + TY V
Sbjct: 319 IQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNV 378
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
++ GL GR ++A ++ +G +LN +Y ++++ C G ++A+ +S M G
Sbjct: 379 ILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERG 438
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLL 278
P T+ ++ L + G E ++L
Sbjct: 439 IWPHHATWNELVVRLCESGYTEIGVRVL 466
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 144/273 (52%), Gaps = 1/273 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
T++ L++ L KEA +F M+ K+G+ P+ V+++ +++G+C EV +AK I +F
Sbjct: 234 TYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDF 293
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + G +V +Y+ ++NG CK+ + EA +E+ + DT+ Y +L++ C+
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ +A KL+ EM + +TYN +L L + A+ ++ + +G+ N +Y +
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+++ LC G L+ A + + +G + T++ ++ C+ G + + ++ G
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
IP ++G ++ ++ K+ + +LL +V+
Sbjct: 474 LIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 128/249 (51%), Gaps = 2/249 (0%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTH-DVQSYTIIINGLCKIKMVDE 98
GL+PN ++ L+ +C ++N A + M + G+++ + +Y+ +++ L E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 99 AWSLLNEMHSKKIIA-DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
A L +M SK+ I+ D + +N +I+G C+ A K+++ M G PNV Y+ L+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ CK + A ++++ G++ + YT LM+ C+ G +A ++ ++
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
+ TY+V++ G EG +EAL ++ + S G + +Y II+ AL GE EKA K
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 278 LREMVARSL 286
L M R +
Sbjct: 431 LSVMSERGI 439
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ V ++ L+ CK G ++EAK F + K GL+ + V Y++LM+ +C E ++A
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M D +Y +I+ GL +EA +L++ S+ + + Y +++ LC
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 127 ---KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
+LE+ A K ++ M+ RGI P+ T+N L+ LC+S + + + ++ G+ P
Sbjct: 420 CNGELEK---AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIP 476
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
++ +++ +CK +L E+ ++
Sbjct: 477 GPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 48/260 (18%)
Query: 66 DIFNFMVQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM------------------ 106
DIFN Q +G H+ +Y+++++ L + K ++L++M
Sbjct: 74 DIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRH 133
Query: 107 ------HSK--------KIIAD--------TICYNSLID-GLCKLERSFDAWKLVNEMNH 143
H K ++IA + C N LID G L R L+ ++
Sbjct: 134 FSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL----LLYAKHN 189
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ-PNMYTYTVLMDGLCKVGRLK 202
G+ PN +N L+ CK+ ++ A ++++++ GI PN TY+ LMD L R K
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 203 DAQEIFQDILIK-GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
+A E+F+D++ K G + + T++VMI+G+C+ G + A ++ M+ +GC P+ Y +
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 262 IRALFKKGENEKAEKLLREM 281
+ K G+ ++A++ E+
Sbjct: 310 MNGFCKVGKIQEAKQTFDEV 329
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 146/280 (52%), Gaps = 12/280 (4%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++ + +C G++ A +F + + GL P+ V Y++++DGYC + +KA F ++
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + TI+I + + +A S+ M ++ + D + YN+L+ G K +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
++L++EM GI P+V TYN L+ + ++D A +I ++ +G P+ +T ++
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 193 DGLCKVGRLKDAQEIF------QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
G K G D QE F D+ +K +V T S ++ GYCK ++A++L +K+
Sbjct: 556 GGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G PD V Y +I G+ EKA +L+ MV R +
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
++ + C +G + + M G+ P+IV+++ +D C + +A + +
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
G++ D S + +I+G CK+ +EA L+ HS ++ + Y+S + +C
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLI---HSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A + E+ G+ P+ + Y ++D C D+A + + G P++ T T+L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
+ G + DA+ +F+++ +G L+V TY+ ++ GY K ++ L+ +M S+G P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D TY I+I ++ +G ++A +++ E++ R
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 40/317 (12%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I ++ F + ++ LCK G +KEA +V + G+ + VS SS++DG+C V + +A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
K I +F ++ ++ Y+ ++ +C + A ++ E+ ++ D +CY ++IDG
Sbjct: 362 KLIHSFRLRP----NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 125 LCKLERSFDAWKLVNEMNHRGIPP-----------------------------------N 149
C L R+ A++ + G PP +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
V+TYN L+ K+H +++ LI ++ GI P++ TY +L+ + G + +A EI
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
+++ +G+ + ++ +I G+ K G F EA IL M PD VT ++ K
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 270 ENEKAEKLLREMVARSL 286
EKA L +++ L
Sbjct: 598 RMEKAIVLFNKLLDAGL 614
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 125/221 (56%), Gaps = 6/221 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T IL+ A + G++ +A++VF M +GL+ ++V+Y++LM GY ++NK ++ + M
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---L 128
G++ DV +Y I+I+ + +DEA +++E+ + + T+ + +I G K
Sbjct: 505 RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +F W + ++ + P+V+T + LL CK+ +++AI L K+ + G++P++ Y
Sbjct: 565 QEAFILWFYMADLR---MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
L+ G C VG ++ A E+ ++ +G N T+ ++ G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 3/274 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+IL++ +E V A + + + G+ P+ SL+ V + A++ M+
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
RG + ++ I C D+ W LL M I D + + ID LCK
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A ++ ++ GI + ++ + ++D CK + AI LI ++PN++ Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFL 380
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+C G + A IFQ+I G + Y+ MIDGYC G D+A + SG
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P T I+I A + G AE + R M L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 146/280 (52%), Gaps = 12/280 (4%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++ + +C G++ A +F + + GL P+ V Y++++DGYC + +KA F ++
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + + TI+I + + +A S+ M ++ + D + YN+L+ G K +
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLN 495
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
++L++EM GI P+V TYN L+ + ++D A +I ++ +G P+ +T ++
Sbjct: 496 KVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI 555
Query: 193 DGLCKVGRLKDAQEIF------QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
G K G D QE F D+ +K +V T S ++ GYCK ++A++L +K+
Sbjct: 556 GGFSKRG---DFQEAFILWFYMADLRMKP---DVVTCSALLHGYCKAQRMEKAIVLFNKL 609
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+G PD V Y +I G+ EKA +L+ MV R +
Sbjct: 610 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGM 649
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
++ + C +G + + M G+ P+IV+++ +D C + +A + +
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
G++ D S + +I+G CK+ +EA L+ HS ++ + Y+S + +C
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLI---HSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A + E+ G+ P+ + Y ++D C D+A + + G P++ T T+L+
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
+ G + DA+ +F+++ +G L+V TY+ ++ GY K ++ L+ +M S+G P
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISP 511
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D TY I+I ++ +G ++A +++ E++ R
Sbjct: 512 DVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 40/317 (12%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA- 64
I ++ F + ++ LCK G +KEA +V + G+ + VS SS++DG+C V + +A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
K I +F ++ ++ Y+ ++ +C + A ++ E+ ++ D +CY ++IDG
Sbjct: 362 KLIHSFRLRP----NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 125 LCKLERSFDAWKLVNEMNHRGIPP-----------------------------------N 149
C L R+ A++ + G PP +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
V+TYN L+ K+H +++ LI ++ GI P++ TY +L+ + G + +A EI
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
+++ +G+ + ++ +I G+ K G F EA IL M PD VT ++ K
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 270 ENEKAEKLLREMVARSL 286
EKA L +++ L
Sbjct: 598 RMEKAIVLFNKLLDAGL 614
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 125/221 (56%), Gaps = 6/221 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T IL+ A + G++ +A++VF M +GL+ ++V+Y++LM GY ++NK ++ + M
Sbjct: 445 TSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEM 504
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---L 128
G++ DV +Y I+I+ + +DEA +++E+ + + T+ + +I G K
Sbjct: 505 RSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +F W + ++ + P+V+T + LL CK+ +++AI L K+ + G++P++ Y
Sbjct: 565 QEAFILWFYMADLR---MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLY 621
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
L+ G C VG ++ A E+ ++ +G N T+ ++ G
Sbjct: 622 NTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 3/274 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+IL++ +E V A + + + G+ P+ SL+ V + A++ M+
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
RG + ++ I C D+ W LL M I D + + ID LCK
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A ++ ++ GI + ++ + ++D CK + AI LI ++PN++ Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFL 380
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+C G + A IFQ+I G + Y+ MIDGYC G D+A + SG
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P T I+I A + G AE + R M L
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGL 474
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 135/260 (51%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
RTF ++ K G+++ + VF +M + G P + +++ L++G +++ KA +I +
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M GV+ + +YT I+ G + +A+ + ++ + D Y +L+ CK
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R A + EM+ R IP N YN L+D + V A LI++++++G++P+++TYT
Sbjct: 709 RMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+ K G + A + +++ G N++TY+ +I G+ + L ++AL +M++
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM 828
Query: 250 GCIPDAVTYGIIIRALFKKG 269
G PD Y ++ +L +
Sbjct: 829 GIKPDKAVYHCLLTSLLSRA 848
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + IDA + ++ +++ + K+ VF + + G P +V+Y L++ Y V +
Sbjct: 440 MEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGK 499
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++KA ++ M + GV H++++Y+++ING K+K A+++ +M + + D I YN+
Sbjct: 500 ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 121 LIDGLC---KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
+I C ++R+ K + ++ HR P T+ P++ KS + R++ + +
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHR---PTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
G P ++T+ L++GL + +++ A EI ++ + G + N TY+ ++ GY G
Sbjct: 617 RCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 676
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+A +++++ G D TY +++A K G + A + +EM AR++
Sbjct: 677 KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNI 725
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 139/283 (49%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + +V +N ++ A C GN+ A M K P ++ ++ GY +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ ++ ++F+ M + G V ++ +INGL + + +++A +L+EM + A+ Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++ G + + A++ + + G+ ++ TY LL CKS + A+A+ K++ +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I N + Y +L+DG + G + +A ++ Q + +G ++ TY+ I K G + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ +ME+ G P+ TY +I+ + EKA EM A
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA 827
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 113/232 (48%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TFN L+ L ++ +++A + M G+ N +Y+ +M GY V + KA + F
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ G+ D+ +Y ++ CK + A ++ EM ++ I ++ YN LIDG +
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
++A L+ +M G+ P++ TY + K+ ++RA I+++E G++PN+ TYT
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
L+ G + + A ++++ G + Y ++ EA I
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYI 855
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 1/281 (0%)
Query: 2 VLQCIDAEVRT-FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
+ I RT F ++V+ + G++ A+ F M +G+ P Y+SL+ Y + ++
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A M + G+ + +Y++I+ G K + A +E + Y
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I C+ A LV EM GI + Y+ ++D + + + K+++E G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P + TY L++ KVG++ A E+ + + +G N++TYS+MI+G+ K + A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ M G PD + Y II A G ++A + ++EM
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 143/272 (52%), Gaps = 2/272 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+E+LCKE + +A+NV +M+++ Y+ + G C++ + ++ M
Sbjct: 379 TYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSM 438
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA-DTICYNSLIDGLCKLER 130
+Q D + +INGLCK+ VD+A +L++M + K A D + N+++ GL R
Sbjct: 439 LQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGR 498
Query: 131 SFDAWKLVNE-MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A ++N M I P V+ YN ++ L K H D A+++ ++E+ + + TY
Sbjct: 499 AEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYA 558
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+++DGLC ++ A++ + D++ + Y+ + G C+ G +A + + S
Sbjct: 559 IIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADS 618
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G IP+ V Y +I + G +A ++L EM
Sbjct: 619 GAIPNVVCYNTVIAECSRSGLKREAYQILEEM 650
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 40/311 (12%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L+ LC V +A + M +G P++V++++L+ GYC ++E+ A +F+ M
Sbjct: 165 YNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMR 224
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM---------HSKKIIA-----DTIC- 117
G+ + + +++I G K++ V+ L+ E+ S K A D++C
Sbjct: 225 VCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 118 -------------------------YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
Y +ID LC+ R+ A ++V M +G+ P +
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTS 344
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
YN ++ LCK RA L+++ E P+ YTY +LM+ LCK A+ + + +L
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELML 404
Query: 213 IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENE 272
K R Y++ + G C E L ++ M C PD T +I L K G +
Sbjct: 405 RKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
Query: 273 KAEKLLREMVA 283
A K+L +M+
Sbjct: 465 DAMKVLDDMMT 475
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 126/269 (46%), Gaps = 7/269 (2%)
Query: 25 NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYT 84
N EA + + +G P+ ++ SS++ C ++A F + G D ++
Sbjct: 70 NPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCN 129
Query: 85 IIINGLCKIKMVDEAWSLLNEM--HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
+II L + +++ + K+ + YN L++ LC + R DA KLV +M
Sbjct: 130 VIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMR 189
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
+RG P+V+T+ L+ C+ ++ A + ++ GI+PN T +VL+ G K+ ++
Sbjct: 190 NRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVE 249
Query: 203 DAQEIFQDILIKGYN-----LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
+++ +++ N + ++ ++D C+EG F++ + M +
Sbjct: 250 TGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA 309
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
YG +I +L + N A +++ M ++ L
Sbjct: 310 YGHMIDSLCRYRRNHGAARIVYIMKSKGL 338
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 43/314 (13%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNI---VSYSSLMDGYCLVKEVNKAKDIF 68
F LV+++C+EG + +F + L ++ +Y ++D C + + A I
Sbjct: 274 AFANLVDSMCREGYFND---IFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIV 330
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +G+ SY II+GLCK A+ LL E + Y L++ LCK
Sbjct: 331 YIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKE 390
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A ++ M + YN L LC + + ++ + + +P+ YT
Sbjct: 391 LDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTL 450
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGY------NLNVRTYSVMIDGYCKE--------- 233
+++GLCK+GR+ DA ++ D++ + LN ++ G +E
Sbjct: 451 NTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVM 510
Query: 234 -----------------GLF-----DEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
GLF DEA+ + ++E + D+ TY III L +
Sbjct: 511 PENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKV 570
Query: 272 EKAEKLLREMVARS 285
+ A+K +++ S
Sbjct: 571 DMAKKFWDDVIWPS 584
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMV--KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
RT N+++ L + V ++ K+ P++ +Y+ LM+ C + V A +
Sbjct: 126 RTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLV 185
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M RG DV ++T +I G C+I+ ++ A + +EM I +++ + LI G K+
Sbjct: 186 FDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKM 245
Query: 129 ERSFDAWKLVNEM-----NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
KL+ E+ N + L+D +C+ + + + + +
Sbjct: 246 RDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVN 305
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ Y ++D LC+ R A I + KG +Y+ +I G CK+G A L+
Sbjct: 306 VEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL 365
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+ P TY +++ +L K+ + KA +L M+ +
Sbjct: 366 EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRK 406
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I V +N ++ L K EA +VF + K + + +Y+ ++DG C+ +V+ AK
Sbjct: 515 IKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAK 574
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ ++ HD Y + GLC+ + +A L ++ I + +CYN++I
Sbjct: 575 KFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAEC 634
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS 163
+ +A++++ EM G P+ +T+ +LD L S
Sbjct: 635 SRSGLKREAYQILEEMRKNGQAPDAVTWR-ILDKLHDS 671
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 143/315 (45%), Gaps = 39/315 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N L+ LCK G +++A + M + G PN VSY++L+ G C V V+KA +FN M
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVD---------------------------------- 97
+ G+ + + II++ LC+ ++
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 98 -----EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
+A + EM K + AD++ YN +I GLC A+ + +M RG+ P+V T
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFT 337
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
YN L+ LCK D A L ++ G+ P+ +Y V++ GLC G + A E +L
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSML 397
Query: 213 IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENE 272
V ++V+IDGY + G AL +++ M S G P+ T +I K G
Sbjct: 398 KSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLI 457
Query: 273 KAEKLLREMVARSLH 287
A + EM + +H
Sbjct: 458 DAWWVKNEMRSTKIH 472
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ +V T+N L+ ALCKEG EA ++ M G+ P+ +SY ++ G C+ +
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
VN+A + M++ + +V + ++I+G + A S+LN M S + + N+
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G K R DAW + NEM I P+ TYN LL C H+ A L ++ +G
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
QP++ TYT L+ GLC GRLK A+ + I G ++ + ++ Y + EA
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Query: 241 ILMSK 245
++ K
Sbjct: 566 LVYKK 570
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 134/272 (49%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
IL+++ K GNV +A V+ M ++ + + V Y+ ++ G C + A MV+R
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
GV DV +Y +I+ LCK DEA L M + + D I Y +I GLC A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+ + M + P V+ +N ++D + A++++ + G++PN+YT L+ G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
K GRL DA + ++ + + TY++++ C G A L +M GC PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+TY ++R L KG +KAE LL + A +
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 135/258 (52%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+ +N+++ LC GN+ A MVK+G+ P++ +Y++L+ C + ++A
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEAC 355
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ M GV D SY +II GLC V+ A L M ++ + + +N +IDG
Sbjct: 356 DLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY 415
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ + A ++N M G+ PNV T N L+ K + A + ++ I P+
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY +L+ C +G L+ A +++ ++L +G ++ TY+ ++ G C +G +A L+S+
Sbjct: 476 TTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSR 535
Query: 246 MESSGCIPDAVTYGIIIR 263
++++G D V + I+ +
Sbjct: 536 IQATGITIDHVPFLILAK 553
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
++ LC +G + A + M+ G+ P +++++ L++G C + KA + M + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC-KLERSFDA 134
+ + SY +I GLC + VD+A L N M+ I + + N ++ LC K +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 135 WKLVNEM---NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
KL+ E+ + P +++ L+D K+ +V +A+ + K++ ++ + + Y V+
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GLC G + A D++ +G N +V TY+ +I CKEG FDEA L M++ G
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKL 277
PD ++Y +II+ L G+ +A +
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEF 392
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 4/209 (1%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
++ I+ LC +D A L +M +I I +N L++GLCK A LV EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL- 201
G PN ++YN L+ LC ++VD+A+ L + + GI+PN T +++ LC+ G +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 202 KDAQEIFQDILIKGY---NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
+ +++ ++IL L++ ++++D K G +AL + +M D+V Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSLH 287
+IIR L G A + +MV R ++
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 134/251 (53%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++ LV L K G+V EA +F M ++ SY S+++ C + +A ++ + +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
++GV D Y + + L K+K + L +M D YN LI ++
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVD 494
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A + E+ P++I+YN L++ L K+ VD A K+++E+G+ P++ TY+ LM
Sbjct: 495 EAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM 554
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ K R++ A +F+++L+KG N+ TY++++D K G EA+ L SKM+ G
Sbjct: 555 ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLT 614
Query: 253 PDAVTYGIIIR 263
PD++TY ++ R
Sbjct: 615 PDSITYTVLER 625
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 151/318 (47%), Gaps = 32/318 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLM-------- 52
M+ + + V +N L++ L K V +A VF+ MV+ G PN +YS L+
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 53 ----DGYCLVKEVNKAKDIFNFMVQR--------------------GVTHDVQSYTIIIN 88
DG + + + I++++V+ V + SY ++
Sbjct: 356 LVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLE 415
Query: 89 GLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPP 148
LC EA +L+++H K ++ DT+ YN++ L KL++ L +M G P
Sbjct: 416 SLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSP 475
Query: 149 NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
++ TYN L+ + VD AI + +++E +P++ +Y L++ L K G + +A F
Sbjct: 476 DIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRF 535
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+++ KG N +V TYS +++ + K + A L +M GC P+ VTY I++ L K
Sbjct: 536 KEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Query: 269 GENEKAEKLLREMVARSL 286
G +A L +M + L
Sbjct: 596 GRTAEAVDLYSKMKQQGL 613
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 122/221 (55%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ E ++ ++E+LC G EA + + + ++G+ + + Y+++ +K+++
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+F M + G + D+ +Y I+I ++ VDEA ++ E+ D I YNSLI+ L
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K +A EM +G+ P+V+TY+ L++ K+ V+ A +L +++ +G QPN+
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
TY +L+D L K GR +A +++ + +G + TY+V+
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 144/279 (51%), Gaps = 9/279 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ I++ + + G EA +F M+ +GL N+V Y++LM K V+KA +F+ M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 72 VQRGVTHDVQSYTIIINGLC---KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
V+ G + +Y++++N L ++ +D + SK+ + I Y+ L+ L KL
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI-----SKRYMTQGI-YSYLVRTLSKL 385
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A +L +M + +Y +L+ LC + AI ++ KI E+G+ + Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ L K+ ++ ++F+ + G + ++ TY+++I + + G DEA+ + ++E
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
S C PD ++Y +I L K G+ ++A +EM + L+
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 140/313 (44%), Gaps = 38/313 (12%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T NIL+ GN ++ + ++ K L+ N +Y L+ Y ++
Sbjct: 162 MVKSNVHGNISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRD 218
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+KA D++ + + G D+ +Y ++++ L K ++A + +M + D Y
Sbjct: 219 YSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTI 275
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I + ++ + +A L NEM G+ NV+ YN L+ VL K VD+AI + ++ E G
Sbjct: 276 MIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETG 335
Query: 181 IQPNMYTYTVL------------MDG--------------------LCKVGRLKDAQEIF 208
+PN YTY++L +DG L K+G + +A +F
Sbjct: 336 CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLF 395
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
D+ +Y M++ C G EA+ ++SK+ G + D + Y + AL K
Sbjct: 396 CDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKL 455
Query: 269 GENEKAEKLLREM 281
+ L +M
Sbjct: 456 KQISHIHDLFEKM 468
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 4/163 (2%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK--EVNKAK 65
++ T+NIL+ + + G V EA N+F + + +P+I+SY+SL++ CL K +V++A
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN--CLGKNGDVDEAH 532
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F M ++G+ DV +Y+ ++ K + V+ A+SL EM K + + YN L+D L
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCL 592
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
K R+ +A L ++M +G+ P+ ITY L + SH R
Sbjct: 593 EKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSR 635
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 114 DTICYNSLIDGLCK--LERSFDAWK-LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI 170
D YN +I L + L FD + +++ M + N+ T N L+ + + +
Sbjct: 132 DPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCL 191
Query: 171 ALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
L+KK + ++ N +TY L+ + A +++ +I G+ L++ Y++++D
Sbjct: 192 RLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
K+ ++A + M+ C D TY I+IR + + G+ ++A L EM+ L
Sbjct: 249 AKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 149 NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
N TY LL +S +A + +I G + +++ Y +L+D L K + A ++F
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVF 258
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+D+ + + TY++MI + G DEA+ L ++M + G + V Y +++ L K
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 269 GENEKAEKLLREMV 282
+KA ++ MV
Sbjct: 319 KMVDKAIQVFSRMV 332
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 148/277 (53%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+++ N L+ L G +++AK+ F L PN VS++ L+ G+ + A +F+
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFD 210
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M++ V V +Y +I LC+ + +A SLL +M K+I + + + L+ GLC
Sbjct: 211 EMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKG 270
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A KL+ +M +RG P ++ Y L+ L K +D A L+ +++++ I+P++ Y
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYN 330
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L++ LC R+ +A + ++ +KG N TY +MIDG+C+ FD L +++ M +S
Sbjct: 331 ILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS 390
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P T+ ++ L K G + A +L M ++L
Sbjct: 391 RHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%), Gaps = 2/237 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ V T+N L+ LC+ ++ +AK++ M+K+ + PN V++ LM G C E N+AK
Sbjct: 217 VQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAK 276
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M RG + +Y I+++ L K +DEA LL EM ++I D + YN L++ L
Sbjct: 277 KLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHL 336
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C R +A++++ EM +G PN TY ++D C+ D + ++ + P
Sbjct: 337 CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC--KEGLFDEAL 240
T+ ++ GL K G L A + + + K + + ++ C G++ EAL
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEAL 453
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+++ L+ L K N + ++ + + + L+ Y V+KA D+F+ +
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL---CKL 128
+QS +IN L +++A S + ++ +++ +N LI G C
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDW 202
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
E A K+ +EM + P+V+TYN L+ LC++ + +A +L++ + ++ I+PN T+
Sbjct: 203 EA---ACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTF 259
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+LM GLC G +A+++ D+ +G + Y +++ K G DEA +L+ +M+
Sbjct: 260 GLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKK 319
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD V Y I++ L + +A ++L EM
Sbjct: 320 RRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 133/271 (49%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F L++ K G+V +A +VF + I S ++L++ E+ KAK F+
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ + S+ I+I G + A + +EM ++ + YNSLI LC+ +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A L+ +M + I PN +T+ L+ LC + A L+ +E +G +P + Y +LM
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
L K GR+ +A+ + ++ + +V Y+++++ C E EA ++++M+ GC
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 358
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
P+A TY ++I + + + +L M+A
Sbjct: 359 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 41/267 (15%)
Query: 58 VKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIK----------------------- 94
+++ +A +F+ + G HD SY+ +I L K +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 95 ------------MVDEAWSLLNEMHSKKIIADTICYNSLIDGLC---KLERSFDAWKLVN 139
VD+A + +++ S + N+LI+ L +LE++ +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
+M R PN +++N L+ + A + ++ E +QP++ TY L+ LC+
Sbjct: 179 DMRLR---PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYG 259
+ A+ + +D++ K N T+ +++ G C +G ++EA LM ME GC P V YG
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 260 IIIRALFKKGENEKAEKLLREMVARSL 286
I++ L K+G ++A+ LL EM R +
Sbjct: 296 ILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I TF +L++ LC +G EAK + M +G +P +V+Y LM
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++AK + M +R + DV Y I++N LC V EA+ +L EM K + Y
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+IDG C++E ++N M P T+ ++ L K ++D A +++ + ++
Sbjct: 367 MIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKN 426
Query: 181 IQPNMYTYTVLMDGLC 196
+ + L+ LC
Sbjct: 427 LSFGSGAWQNLLSDLC 442
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 126/231 (54%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L + R++N+L++A C ++ A +F M+++ + P++ SY L+ G+C +VN
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
A ++ + M+ +G D SYT ++N LC+ + EA+ LL M K D + YN++I
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
G C+ +R+ DA K++++M G PN ++Y L+ LC D ++++ +G
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
P+ L+ G C G++++A ++ + ++ G L+ T+ ++I C E
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 413
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 144/272 (52%), Gaps = 3/272 (1%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R ++LV G +++A +F G+ PN SY+ LM +CL +++ A +F
Sbjct: 159 RILDVLVS---HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M++R V DV SY I+I G C+ V+ A LL++M +K + D + Y +L++ LC+ +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ 275
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A+KL+ M +G P+++ YN ++ C+ A ++ + G PN +Y
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ GLC G + ++ ++++ KG++ + + ++ G+C G +EA ++ + +G
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ T+ ++I + + E+EK + L + V
Sbjct: 396 ETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + ++ +N ++ C+E +A+ V M+ G PN VSY +L+ G C
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
++ K M+ +G + ++ G C V+EA
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQ---GLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
TFN+L+ C G A++V +K P SY++++ VK+ ++
Sbjct: 189 TFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVY 245
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M++ G T DV +Y I++ ++ D + LL+EM D YN L+ L
Sbjct: 246 EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATG 305
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A L+N M G+ P VI + L+D L ++ ++ + + + G P++ Y
Sbjct: 306 NKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCY 365
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
TV++ G G L+ A+E+F+++ KG NV TY+ MI G+C G F EA L+ +MES
Sbjct: 366 TVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMES 425
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
GC P+ V Y ++ L G+ +A +++++MV +
Sbjct: 426 RGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ +V T+NI++ A + G + MVK G P++ +Y+ L+ +
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
A ++ N M + GV V +T +I+GL + ++ ++E D +CY
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G A ++ EM +G PNV TYN ++ C + A AL+K++E +G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG 427
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
PN Y+ L++ L G++ +A E+ +D++ KG+ +++
Sbjct: 428 CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+L++EM G P T+N L+ ++ + K + +P ++Y ++ L
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSL 232
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
V + K +++ +L G+ +V TY++++ + G D L+ +M G PD
Sbjct: 233 LGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDL 292
Query: 256 VTYGIIIRALFKKGENEKAEKLLREM 281
TY I++ L + A LL M
Sbjct: 293 YTYNILLHHLATGNKPLAALNLLNHM 318
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E FN +++ L K NV +A+ VF M K+ EP+I SY+ L++G+ + + ++
Sbjct: 196 ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN 255
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G DV +Y IIIN CK K +EA NEM + + SLI+GL
Sbjct: 256 REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSE 315
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
++ DA + G P TYN L+ C S ++ A + ++ +G+ PN TY
Sbjct: 316 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTY 375
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+++ L ++ R K+A E++Q + + V TY +M+ +C + D A+ + +M+
Sbjct: 376 DIILHHLIRMQRSKEAYEVYQTMSCEP---TVSTYEIMVRMFCNKERLDMAIKIWDEMKG 432
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G +P + +I AL + + ++A + EM+
Sbjct: 433 KGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 3/276 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +++++ IL+E +E N+ V M +G EP++V+Y +++ +C K+ +A
Sbjct: 228 FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAI 287
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
FN M QR + +INGL K +++A S + YN+L+
Sbjct: 288 RFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 347
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C +R DA+K V+EM +G+ PN TY+ +L L + A + + + +P +
Sbjct: 348 CWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTV 404
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY +++ C RL A +I+ ++ KG + +S +I C E DEA ++
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M G P + + + L +G +K L+ +M
Sbjct: 465 MLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 115/278 (41%), Gaps = 69/278 (24%)
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA------------------- 113
Q+G H +Y +I L KIK WSL+++M +KK+++
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 114 ---------------DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
++ +N ++D L K DA K+ ++M + P++ +Y LL+
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV-------------------- 198
+ ++ R + ++++++G +P++ Y ++++ CK
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 199 ---------------GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+L DA E F+ G+ L TY+ ++ YC ++A +
Sbjct: 301 SPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M G P+A TY II+ L + +++A ++ + M
Sbjct: 361 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + RT++I++ L + KEA V+ M EP + +Y ++ +C +
Sbjct: 363 MRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKER 419
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM 106
++ A I++ M +GV + ++ +I LC +DEA NEM
Sbjct: 420 LDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 150/304 (49%), Gaps = 38/304 (12%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
FN L+ ALCK NV++A+ VF M + P+ +YS L++G+ + KA+++F M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 263
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLN--------------------------- 104
+ G D+ +Y+I+++ LCK VDEA ++
Sbjct: 264 IDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRL 323
Query: 105 --------EMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
EM + AD +NSLI CK R + ++++ EM +G+ PN + N +
Sbjct: 324 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNII 383
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
L L + D A + +K+ + +P+ TYT+++ C+ ++ A ++++ + KG
Sbjct: 384 LRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGV 442
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
++ T+SV+I+G C+E +A +L+ +M G P VT+G +R L K E E K
Sbjct: 443 FPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG-RLRQLLIKEEREDVLK 501
Query: 277 LLRE 280
L E
Sbjct: 502 FLNE 505
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 146/273 (53%), Gaps = 2/273 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR +++++E+ K K ++ M K+ + N+ ++ +M Y ++V++A FN
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + + ++ ++ +++ LCK K V +A + M + D+ Y+ L++G K
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEP 251
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A ++ EM G P+++TY+ ++D+LCK+ VD A+ +++ ++ +P + Y+
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
VL+ RL++A + F ++ G +V ++ +I +CK ++ +M+S
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSK 371
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G P++ + II+R L ++GE ++A + R+M+
Sbjct: 372 GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI 404
Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 4/210 (1%)
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII-ADTICYNSLIDGLCKLERS 131
QR H V++Y ++I KI+ W L+N M KK++ +T C ++ + ++
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCI--VMRKYARAQKV 184
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A N M +PPN++ +N LL LCKS +V +A + + + ++ P+ TY++L
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSIL 243
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++G K L A+E+F++++ G + ++ TYS+M+D CK G DEAL ++ M+ S C
Sbjct: 244 LEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSIC 303
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P Y +++ + E+A EM
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+V FN L+ A CK +K V M +G+ PN S + ++ E ++A
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+F M+ + D +YT++I C+ K ++ A + M K + ++ LI+GL
Sbjct: 398 DVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 456
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD 167
C+ + A L+ EM GI P+ +T+ L +L K D
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 148/280 (52%), Gaps = 5/280 (1%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C+ + + L+ K G V++A ++F M + G P + +Y+ L+ G V++A
Sbjct: 263 CMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ M++ G+T DV ++N L K+ V+E ++ +EM + + YN++I
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
Query: 125 LCKLE---RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
L + + +W ++M + P+ TY+ L+D CK++ V++A+ L+++++E+G
Sbjct: 383 LFESKAHVSEVSSW--FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF 440
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
P Y L++ L K R + A E+F+++ N++ R Y+VMI + K G EA+
Sbjct: 441 PPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L ++M++ G PD Y ++ + K G +A LLR+M
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 135/257 (52%), Gaps = 1/257 (0%)
Query: 10 VRTFNILVEALCK-EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V ++N +++AL + + +V E + F M + P+ +YS L+DGYC V KA +
Sbjct: 373 VVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M ++G +Y +IN L K K + A L E+ + Y +I K
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKC 492
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +A L NEM ++G P+V YN L+ + K+ ++ A +L++K+EE G + ++ ++
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSH 552
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++++G + G + A E+F+ I G + TY+ ++ + G+F+EA +M +M+
Sbjct: 553 NIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Query: 249 SGCIPDAVTYGIIIRAL 265
G DA+TY I+ A+
Sbjct: 613 KGFEYDAITYSSILDAV 629
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK- 59
M+ + +V N L+ L K G V+E NVF+ M P +VSY++++ K
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKA 388
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
V++ F+ M V+ +Y+I+I+G CK V++A LL EM K Y
Sbjct: 389 HVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
SLI+ L K +R A +L E+ + Y ++ K + A+ L +++ Q
Sbjct: 449 SLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G P++Y Y LM G+ K G + +A + + + G ++ +++++++G+ + G+ A
Sbjct: 509 GSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ + ++ SG PD VTY ++ G E+A +++REM
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 49 SSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-H 107
S L+ K V+KA +F R +Y +I L + ++ + EM +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN 225
Query: 108 SKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD 167
DTI Y++LI KL R+ A +L +EM + P Y LL + K V+
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 168 RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
+A+ L ++++ G P +YTYT L+ GL K GR+ +A ++D+L G +V + ++
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
+ K G +E + S+M C P V+Y +I+ALF+
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE 385
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK------------ 59
T++IL++ CK V++A + M ++G P +Y SL++ K
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 60 -----------------------EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMV 96
++++A D+FN M +G DV +Y +++G+ K M+
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+EA SLL +M AD +N +++G + A ++ + H GI P+ +TYN L
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTL 590
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
L + + A ++++++++G + + TY+ ++D + V KD
Sbjct: 591 LGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
++ L + KMV +A S+ + +K + YNS+I L + + ++ EM + G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 146 -IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
P+ ITY+ L+ K D AI L ++++ +QP YT L+ KVG+++ A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
++F+++ G + V TY+ +I G K G DEA M G PD V ++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 265 LFKKGENEKAEKLLREM 281
L K G E+ + EM
Sbjct: 348 LGKVGRVEELTNVFSEM 364
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R + ++++ K G + EA ++F M QG P++ +Y++LM G +N+A +
Sbjct: 480 RVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + G D+ S+ II+NG + + A + + I D + YN+L+
Sbjct: 540 MEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
+A +++ EM +G + ITY+ +LD + H
Sbjct: 600 FEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYNSLIDGLCKLERS 131
+R HD +Y +I L + ++ E + + E+ + + + L+ L + +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMV 178
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYTYTV 190
A + + R P TYN ++ +L + ++ + ++ +G P+ TY+
Sbjct: 179 SKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ K+GR A +F ++ + Y+ ++ Y K G ++AL L +M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
C P TY +I+ L K G ++A ++M+ L
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 140/268 (52%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V TFNIL+ C+ A ++F M ++G EPN+VS+++L+ G+ ++ + +
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKM 285
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M++ G + I+++GLC+ VD+A L+ ++ +K+++ Y SL++ LC
Sbjct: 286 AYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCG 345
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
++ A +++ E+ +G P I L++ L KS ++A ++K+ GI P+ T
Sbjct: 346 ENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVT 405
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ +L+ LC DA + KGY + TY V++ G+ KEG E +L+++M
Sbjct: 406 FNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEML 465
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAE 275
+PD TY ++ L G+ + +
Sbjct: 466 DKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 137/277 (49%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +N +V K G++ +A + M K+ +P++ +++ L++GYC + + A D+F
Sbjct: 193 VGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFR 252
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++G +V S+ +I G ++E + EM L+DGLC+
Sbjct: 253 EMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREG 312
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R DA LV ++ ++ + P+ Y L++ LC + RA+ +++++ ++G P T
Sbjct: 313 RVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L++GL K GR + A + ++ G + T+++++ C +A L S
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSK 432
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PD TY +++ K+G ++ E L+ EM+ + +
Sbjct: 433 GYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVK--QGLEPNIVSYSSLMDGYCLVK 59
+ C + E F ++A C+ + A F M + G +PN+ Y+++++GY
Sbjct: 150 IFSCPELEP-IFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSG 207
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+++KA + M + DV ++ I+ING C+ D A L EM K + + +N
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+LI G + + K+ EM G + T L+D LC+ VD A L+ + +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+ P+ + Y L++ LC + A E+ +++ KG + +++G K G ++A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
M KM ++G +PD+VT+ +++R L + A +L
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 115/237 (48%), Gaps = 3/237 (1%)
Query: 48 YSSLMDGYCLVKEVNKAKDIFNFMVQRGV--THDVQSYTIIINGLCKIKMVDEAWSLLNE 105
+ S +D YC ++++ A F+ M +R + +V Y ++NG K +D+A
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
M ++ D +N LI+G C+ + A L EM +G PNV+++N L+ S
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
++ + + ++ E G + + T +L+DGLC+ GR+ DA + D+L K + Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+++ C E A+ +M ++ G P + ++ L K G EKA + +M+
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMM 395
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 143/276 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+ T ++ AL G EA+ +F + + G++P +Y++L+ GY + A+
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + M +RGV+ D +Y+++I+ + A +L EM + + ++ ++ L+ G
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF 419
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
++++ EM G+ P+ YN ++D K + +D A+ ++ +GI+P+
Sbjct: 420 RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ L+D CK GR A+E+F+ + +G TY++MI+ Y + +D+ L+ K
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M+S G +P+ VT+ ++ K G A + L EM
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ + T+++L++A G + A+ V M ++PN +S L+ G+ E K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M GV D Q Y ++I+ K +D A + + M S+ I D + +N+LID
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK R A ++ M RG P TYN +++ D L+ K++ QGI PN+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+T L+D K GR DA E +++ G + Y+ +I+ Y + GL ++A+
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M S G P + +I A + + +A +L+ M
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 133/281 (47%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I R +N L++ K G +K+A+++ + M K+G+ P+ +YS L+D Y A+
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M V + ++ ++ G + + +L EM S + D YN +ID
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K A + M GI P+ +T+N L+D CK A + + +E +G P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY ++++ R D + + + +G NV T++ ++D Y K G F++A+ + +
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M+S G P + Y +I A ++G +E+A R M + L
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++IL+ AL + + EA F + KQ L P ++Y++L+ ++ KA ++ M
Sbjct: 170 YSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAW--SLLNEMHSKKIIADTICYNSLIDGLCKLER 130
Q G D +Y+++I L + +D L E+ K+ D N +I G K
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A +L+ G+ T ++ L S A AL +++ + GI+P Y
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ G K G LKDA+ + ++ +G + + TYS++ID Y G ++ A I++ +ME+
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P++ + ++ +GE +K ++L+EM
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM 435
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 37/310 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMD------------------ 53
T+N L+ A + ++++A N+ A M + G + + V+YS ++
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 54 -------------------GYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIK 94
G+ + +KA + G++ + II+ L
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 95 MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
EA +L E+ I T YN+L+ G K DA +V+EM RG+ P+ TY+
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+D + + A ++K++E +QPN + ++ L+ G G + ++ +++
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G + + Y+V+ID + K D A+ +M S G PD VT+ +I K G + A
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVA 498
Query: 275 EKLLREMVAR 284
E++ M R
Sbjct: 499 EEMFEAMERR 508
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 129/281 (45%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ +V+ N ++ K G+ +A + + GL + S++ +A+
Sbjct: 265 LELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAE 324
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F + Q G+ ++Y ++ G K + +A S+++EM + + D Y+ LID
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
R A ++ EM + PN ++ LL + ++K+++ G++P+
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y V++D K L A F +L +G + T++ +ID +CK G A +
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
ME GC+P A TY I+I + + + ++LL +M ++ +
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 125/253 (49%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N++++ K + A F M+ +G+EP+ V++++L+D +C A+++F M
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+RG +Y I+IN + D+ LL +M S+ I+ + + + +L+D K R
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA + + EM G+ P+ YN L++ + ++A+ + + G++P++ L+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ + R +A + Q + G +V TY+ ++ + F + ++ +M SGC
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 253 PDAVTYGIIIRAL 265
PD ++ AL
Sbjct: 687 PDRKARSMLRSAL 699
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 110/215 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I+ + T+N L++ CK G A+ +F M ++G P +Y+ +++ Y +
Sbjct: 470 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ K + M +G+ +V ++T +++ K ++A L EM S + + YN+
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+ + S A M G+ P+++ N L++ + A A+++ ++E G
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENG 649
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
++P++ TYT LM L +V + + +++++++ G
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NI++ + + + K + M QG+ PN+V++++L+D Y N A + M
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ Y +IN + + ++A + M S + + NSLI+ + R
Sbjct: 576 KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRD 635
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A+ ++ M G+ P+V+TY L+ L + + + +++ G +P+ ++L
Sbjct: 636 AEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
Query: 192 MDGL 195
L
Sbjct: 696 RSAL 699
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M Q I V T LV+ K G +A M GL+P+ Y++L++ Y
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+A + F M G+ + + +IN + + EA+++L M + D + Y +
Sbjct: 600 SEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTT 659
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPN 149
L+ L ++++ + EM G P+
Sbjct: 660 LMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 143/274 (52%), Gaps = 1/274 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F L++ALCK G+VK+A +F M + N+ ++SL+ G+C V ++ +AK + M
Sbjct: 221 FGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMN 279
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D+ YT +++G + +A+ LL +M + + CY LI LCK++R
Sbjct: 280 EAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRME 339
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A K+ EM +V+TY L+ CK +D+ ++ + ++G+ P+ TY +M
Sbjct: 340 EAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIM 399
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
K ++ E+ + + Y+ ++ Y+V+I CK G EA+ L ++ME +G
Sbjct: 400 VAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS 459
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P T+ I+I L +G +A +EMV R L
Sbjct: 460 PGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+R F L+ C+ G + EAK V M + G EP+IV Y++L+ GY ++ A D+
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +RG + YT++I LCK+ ++EA + EM + AD + Y +L+ G CK
Sbjct: 312 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ + ++++M +G+ P+ +TY ++ K + + L++K+ + P++ Y
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
V++ CK+G +K+A ++ ++ G + V T+ +MI+G +G EA +M +
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Query: 250 GCIPDAVTYGII 261
G YG +
Sbjct: 492 GLF-SVSQYGTL 502
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 3/278 (1%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q I+ E+ F +LV+ VK+A V M K G EP+ + L+D C V
Sbjct: 179 QLIEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A +F M R +++ +T ++ G C++ + EA +L +M+ D + Y +L+
Sbjct: 237 AAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G + DA+ L+ +M RG PN Y L+ LCK ++ A+ + ++E +
Sbjct: 296 GYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEA 355
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
++ TYT L+ G CK G++ + D++ KG + TY ++ + K+ F+E L LM
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
KM PD Y ++IR K GE ++A +L EM
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 37/245 (15%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHS------------------------KKII- 112
H ++ Y ++ L K++ W L+ EM KK I
Sbjct: 145 HSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 113 -----------ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
D + L+D LCK DA KL +M R P N+ + LL C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWC 263
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
+ + A ++ ++ E G +P++ YT L+ G G++ DA ++ +D+ +G+ N
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323
Query: 222 TYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
Y+V+I CK +EA+ + +ME C D VTY ++ K G+ +K +L +M
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 282 VARSL 286
+ + L
Sbjct: 384 IKKGL 388
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 138/277 (49%), Gaps = 6/277 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAV-MVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
I ++ FN +++ L KE ++ A+ F M+ G+ ++ +Y LM G L +
Sbjct: 143 IKPSLKVFNSILDVLVKE-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDG 201
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ M GV + Y +++ LCK V A SL++EM + + +N LI
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISA 257
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C ++ + L+ + G P+V+T +++VLC V A+ +++++E +G + +
Sbjct: 258 YCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVD 317
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ L+ G C +G+++ AQ F ++ KGY NV TY+++I GYC G+ D AL +
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M++ + T+ +IR L G + K+L M
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 35/314 (11%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V T ++E LC EG V EA V + +G + ++V+ ++L+ GYC + ++ A+
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F M ++G +V++Y ++I G C + M+D A N+M + I + +N+LI GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 128 LERSFDAWKLVNEMNH-------RGIPPNVITYN--------PLLDVLCK-----SHHVD 167
R+ D K++ M R P N + Y L+ L K VD
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVD 460
Query: 168 RAIALIKKIEEQGIQ---------------PNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
R+ LI E+ G+ P++ L+ + G+++++ E+ D++
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 213 IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENE 272
+GY T++ +I G+CK+ + + M GC+PD +Y ++ L KG+ +
Sbjct: 521 TRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQ 580
Query: 273 KAEKLLREMVARSL 286
KA L MV +S+
Sbjct: 581 KAWLLFSRMVEKSI 594
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 13/295 (4%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I +V T+ IL++ L + + + +M G+ PN V Y++L+ C +
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A+ + + M + +DV ++ I+I+ C + + ++ LL + S + D +
Sbjct: 233 VGRARSLMSEMKE---PNDV-TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+++ LC R +A +++ + +G +V+ N L+ C + A ++E +G
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TY +L+ G C VG L A + F D+ N T++ +I G G D+ L
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 241 ILMSKMESSGCIPDAV--TYGIIIRALFKKGENEKA-------EKLLREMVARSL 286
++ M+ S + A Y +I +K+ E A EKL V RS
Sbjct: 409 KILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSF 463
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 126/290 (43%), Gaps = 35/290 (12%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N LV+ C G ++ A+ F M ++G PN+ +Y+ L+ GYC V ++ A D FN M
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII--ADTICYNSLIDGLCKLERS 131
+ + ++ +I GL D+ +L M + A YN +I G K R
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRW 441
Query: 132 FDA------------------WKLV---------------NEMNHRGIPPNVITYNPLLD 158
DA +KL+ ++M G P++I + L+
Sbjct: 442 EDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
+ ++ ++ LI + +G P T+ ++ G CK ++ + + +D+ +G
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+ +Y+ +++ C +G +A +L S+M +PD + ++ L +K
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYNSLIDGLCKLERSFD 133
G H +Y + + LC + D + LL+EM S + D + ++I G +
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI-KKIEEQGIQPNMYTYTVLM 192
+V+ ++ GI P++ +N +LDVL K +D A +K+ GI ++YTY +LM
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
GL R+ D ++ Q + G N Y+ ++ CK G A LMS+M+
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE---- 245
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMV 282
P+ VT+ I+I A + +KL++ MV
Sbjct: 246 PNDVTFNILISAYCNE------QKLIQSMV 269
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 111/239 (46%), Gaps = 5/239 (2%)
Query: 47 SYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNE 105
+Y +L C+ + + + + M G+ D + II G + +++ S+++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
+ I +NS++D L K + +M GI +V TY L+ L ++
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
+ L++ ++ G+ PN Y L+ LCK G++ A+ + ++ N T+++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNI 253
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+I YC E ++++L+ K S G +PD VT ++ L +G +A ++L + ++
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK 312
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A + +N ++ KE ++A M K L P V S + C ++ K
Sbjct: 423 ARIDPYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTA 480
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
++ M+ G + +I+ + ++E+ L+N+M ++ + + +N++I G CK
Sbjct: 481 YDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
++ + K V +M RG P+ +YNPLL+ LC + +A L ++ E+ I P+
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 188 YTVLM 192
++ LM
Sbjct: 601 WSSLM 605
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 141/272 (51%), Gaps = 4/272 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK--EVNKAKDIFNF 70
++ ++ L KE + ++G P+ ++++ M CL+K ++ + IF+
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMS--CLLKGHDLVETCRIFDG 380
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
V RGV Y +++ L + E L +M +++ YN++ID LCK R
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A + EM RGI PN++T+N L V + +++K+ G +P++ T+++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+++ LC+ +KDA + F+++L G N TY+++I C G D ++ L +KM+ +G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
PD Y I++ K + +KAE+LL+ M+
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
+LV+AL E M GL ++ SY++++D C + + A M R
Sbjct: 395 VLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR 454
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G++ ++ ++ ++G V + +L ++ D I ++ +I+ LC+ + DA
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+ EM GI PN ITYN L+ C + DR++ L K++E G+ P++Y Y +
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
CK+ ++K A+E+ + +L G + TYS +I + G EA + S +E GC+PD
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Query: 255 AVT 257
+ T
Sbjct: 635 SYT 637
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 109/204 (53%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ V ++N +++ LCK ++ A M +G+ PN+V++++ + GY + +V K +
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
++ G DV ++++IIN LC+ K + +A+ EM I + I YN LI C
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ + KL +M G+ P++ YN + CK V +A L+K + G++P+ +T
Sbjct: 543 TGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFT 602
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDI 211
Y+ L+ L + GR +A+E+F I
Sbjct: 603 YSTLIKALSESGRESEAREMFSSI 626
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN + L K ++ E +F V +G++P Y L+ + ++ M
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ V SY +I+ LCK + ++ A L EM + I + + +N+ + G
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++ ++ G P+VIT++ +++ LC++ + A K++ E GI+PN TY +L
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNIL 536
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ C G + ++F + G + ++ Y+ I +CK +A L+ M G
Sbjct: 537 IRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL 596
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLL 278
PD TY +I+AL + G +A ++
Sbjct: 597 KPDNFTYSTLIKALSESGRESEAREMF 623
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 145/340 (42%), Gaps = 70/340 (20%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NIL+ +CK+G V EA + M ++G PN+ +Y+ L+DG+ + V++A M
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 72 VQRGVTHDVQSYTIIINGL------CKI-----------------------------KMV 96
R + + + ++G+ CK M
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 97 DEAWSLLNEMHSKKIIADTICYNS-----------------------------------L 121
E L ++ + I D+ +N+ L
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ L +R + + + +M G+ +V +YN ++D LCK+ ++ A + +++++GI
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
PN+ T+ + G G +K + + +L+ G+ +V T+S++I+ C+ +A
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M G P+ +TY I+IR+ G+ +++ KL +M
Sbjct: 517 CFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 35/312 (11%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ R +N +++AL K ++ A F M G +P+ +Y+ L+ G C V++A
Sbjct: 176 MKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAI 235
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M Q G +V +YTI+I+G VDEA L M +K+ + + + G+
Sbjct: 236 RLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGI 295
Query: 126 ------CK--------------LER-SFDA--------------WKLVNEMNHRGIPPNV 150
CK L+R +DA + + ++ RG P+
Sbjct: 296 FRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
T+N + L K H + + +G++P Y VL+ L R + +
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ + G +V +Y+ +ID CK + A + +++M+ G P+ VT+ + +G+
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 271 NEKAEKLLREMV 282
+K +L +++
Sbjct: 476 VKKVHGVLEKLL 487
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I + TFN + G+VK+ V ++ G +P+++++S +++ C KE+ A
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAF 515
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D F M++ G+ + +Y I+I C D + L +M + D YN+ I
Sbjct: 516 DCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSF 575
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK+ + A +L+ M G+ P+ TY+ L+ L +S A + IE G P+
Sbjct: 576 CKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Query: 186 YT 187
YT
Sbjct: 636 YT 637
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 118/307 (38%), Gaps = 35/307 (11%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
+L+ + + G K +VFA + G++P+ Y++++D ++ A F M
Sbjct: 150 VLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD 209
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G D +Y I+I+G+CK +VDEA L+ +M + + Y LIDG R +A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 135 WKLVNEMNHRGIPPNVIT-----------------------------------YNPLLDV 159
K + M R + PN T Y+ +L
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYC 329
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
L + ++KI E+G P+ T+ M L K L + IF + +G
Sbjct: 330 LSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPG 389
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
Y V++ F E + +M G + +Y +I L K E A L
Sbjct: 390 FNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLT 449
Query: 280 EMVARSL 286
EM R +
Sbjct: 450 EMQDRGI 456
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%)
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G++P+ Y ++D L K L A FQ + G + TY+++I G CK+G+ DEA
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ L+ +ME G P+ TY I+I G ++A K L M R L+
Sbjct: 235 IRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLN 282
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%)
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
++ L+K+I + G + + VL+ ++G K ++F I G + R Y+ +ID
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
K D A + +M S GC PD TY I+I + KKG ++A +L+++M
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQM 241
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + N + +L +G V A + M + + PN + + +M GYC +++K ++
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G SY +I G C+ ++ A L N M + + + +N+LI G C+
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A K+ EM + PN +TYN L++ + + A + + GIQ ++ TY
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ GLCK + + A + +++ + N T+S +I G C D L M S
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRS 442
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
GC P+ T+ +++ A + + + A ++LREMV RS+
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 144/281 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I T N+++ C+ G + + + M + G VSY++L+ G+C ++ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N M + G+ +V ++ +I+G C+ + EA + EM + + +T+ YN+LI+G
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ A++ +M GI +++TYN L+ LCK +A +K+++++ + PN
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T++ L+ G C E+++ ++ G + N +T+++++ +C+ FD A ++ +
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M D+ T + L +G+++ +KLL+EM +
Sbjct: 474 MVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I ++ T+N L+ LCK+ ++A + K+ L PN ++S+L+ G C+ K
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ +++ M++ G + Q++ ++++ C+ + D A +L EM + I D+ +
Sbjct: 429 ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQ 488
Query: 121 LIDGLCKLERSFDAWKLVNEM 141
+ +GL + KL+ EM
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + N + +L +G V A + M + + PN + + +M GYC +++K ++
Sbjct: 203 VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQ 262
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G SY +I G C+ ++ A L N M + + + +N+LI G C+
Sbjct: 263 DMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAM 322
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A K+ EM + PN +TYN L++ + + A + + GIQ ++ TY
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ GLCK + + A + +++ + N T+S +I G C D L M S
Sbjct: 383 ALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRS 442
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
GC P+ T+ +++ A + + + A ++LREMV RS+
Sbjct: 443 GCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 144/281 (51%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I T N+++ C+ G + + + M + G VSY++L+ G+C ++ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ N M + G+ +V ++ +I+G C+ + EA + EM + + +T+ YN+LI+G
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ A++ +M GI +++TYN L+ LCK +A +K+++++ + PN
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T++ L+ G C E+++ ++ G + N +T+++++ +C+ FD A ++ +
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLRE 473
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M D+ T + L +G+++ +KLL+EM +
Sbjct: 474 MVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I ++ T+N L+ LCK+ ++A + K+ L PN ++S+L+ G C+ K
Sbjct: 369 MVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN 428
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ +++ M++ G + Q++ ++++ C+ + D A +L EM + I D+ +
Sbjct: 429 ADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQ 488
Query: 121 LIDGLCKLERSFDAWKLVNEM 141
+ +GL + KL+ EM
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEM 509
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 13/293 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ ++++N L + + + G AK F MV +G+EP +Y+ ++ G+ L + A
Sbjct: 216 VERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETAL 275
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F M RG++ D ++ +ING C+ K +DEA L EM KI + Y ++I G
Sbjct: 276 RFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY 335
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP-N 184
++R D ++ EM GI PN TY+ LL LC + + A ++K + + I P +
Sbjct: 336 LAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKD 395
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ L+ K G + A E+ + + Y V+I+ CK ++ A+ L+
Sbjct: 396 NSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLD 455
Query: 245 KMESSGCI----------PDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ I P A Y II L G+ KAE L R+++ R +
Sbjct: 456 TLIEKEIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%)
Query: 58 VKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
V ++N A+ I M ++GV D + ++I K +V E+ + +M +
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS 222
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
YNSL + + R A + N+M G+ P TYN +L S ++ A+ + ++
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+GI P+ T+ +++G C+ ++ +A+++F ++ +V +Y+ MI GY D
Sbjct: 283 TRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVD 342
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ L + +M SSG P+A TY ++ L G+ +A+ +L+ M+A+ +
Sbjct: 343 DGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHI 391
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 143/332 (43%), Gaps = 49/332 (14%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I + TFN ++ C+ + EA+ +F M + P++VSY++++ GY V
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII-------- 112
V+ IF M G+ + +Y+ ++ GLC + EA ++L M +K I
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 113 ----------------------------ADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
A+ Y LI+ CK A KL++ + +
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEK 460
Query: 145 GI----------PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
I P+ YNP+++ LC + +A L +++ ++G+Q + L+ G
Sbjct: 461 EIILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRG 517
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
K G + EI + + +G Y ++I Y +G +A + M G +PD
Sbjct: 518 HAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPD 577
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ + +I +LF+ G + A +++ M+ +++
Sbjct: 578 SSLFRSVIESLFEDGRVQTASRVMMIMIDKNV 609
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 146/328 (44%), Gaps = 49/328 (14%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ T+N+++ ++ A F M +G+ P+ +++++++G+C K+
Sbjct: 246 MVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKK 305
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A+ +F M + V SYT +I G + VD+ + EM S I + Y++
Sbjct: 306 MDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPP-------------------------------- 148
L+ GLC + +A ++ M + I P
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 149 NVIT----YNPLLDVLCKSHHVDRAIALIKKIEEQGI----------QPNMYTYTVLMDG 194
NV Y L++ CK+ +RAI L+ + E+ I +P+ Y +++
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEY 483
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LC G+ A+ +F+ ++ +G + + +I G+ KEG D + ++ M G +
Sbjct: 484 LCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRE 542
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMV 282
+ Y ++I++ KGE A+ L MV
Sbjct: 543 SNAYELLIKSYMSKGEPGDAKTALDSMV 570
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 118/272 (43%), Gaps = 36/272 (13%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F +L+E+ K G V+E+ +F M G+E I SY+SL AK FN MV
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
GV +Y +++ G + SL +LE
Sbjct: 248 SEGVEPTRHTYNLMLWGF---------------------------FLSL-----RLE--- 272
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A + +M RGI P+ T+N +++ C+ +D A L +++ I P++ +YT ++
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G V R+ D IF+++ G N TYS ++ G C G EA ++ M +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 253 P-DAVTYGIIIRALFKKGENEKAEKLLREMVA 283
P D + ++ + K G+ A ++L+ M
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMAT 424
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 50/332 (15%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVS-YSSLMDGYCLVK 59
M I+ T++ L+ LC G + EAKN+ M+ + + P S + L+
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAG 410
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII---ADTI 116
++ A ++ M V + Y ++I CK + A LL+ + K+II DT+
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 117 -----CYNSLIDGLC------KLERSF----------------------------DAWKL 137
YN +I+ LC K E F ++++
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 138 VNEMNHRGIPPNVITYNPLL-DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
+ M+ RG+P Y L+ + K D AL +E+ G P+ + +++ L
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED-GHVPDSSLFRSVIESLF 589
Query: 197 KVGRLKDAQEIFQDILIK--GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
+ GR++ A + ++ K G N+ + +++ G +EAL + + +G D
Sbjct: 590 EDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTAD 649
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ ++ L +KG+ A KLL + R L
Sbjct: 650 LDS---LLSVLSEKGKTIAALKLLDFGLERDL 678
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 43/323 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ T+N+LV L + G+ +E ++ M +G +PN V+ S +++G C ++
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 61 VNKAKDIFNFMVQR---------------GVTHDVQS-------------YTIIINGLCK 92
V +A+D F+ + Q+ G++ Y + LC
Sbjct: 509 VKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCI 568
Query: 93 IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
+++A +L +M + ++ +I CKL +A L + M RG+ P++ T
Sbjct: 569 EGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFT 628
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK--------------V 198
Y ++ C+ + + +A +L + ++++GI+P++ TYTVL+D K V
Sbjct: 629 YTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEV 688
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
G+ K A E+ ++ G L+V Y+V+ID CK ++A L +M SG PD V Y
Sbjct: 689 GKRK-ASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAY 747
Query: 259 GIIIRALFKKGENEKAEKLLREM 281
+I + F+KG + A L+ E+
Sbjct: 748 TTLISSYFRKGYIDMAVTLVTEL 770
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 132/264 (50%), Gaps = 4/264 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++V C E +K A++V M + G ++ + +++D YC + +A + M+
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+G+ + ++I+ CK+ M EA E I D +CYN D L KL R
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVE 405
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A++L+ EM RGI P+VI Y L+D C V A+ LI ++ G+ P++ TY VL+
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
GL + G ++ EI++ + +G N T SV+I+G C EA S +E C
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK-CP 524
Query: 253 PDAVTYGIIIRALFKKGENEKAEK 276
+ ++ ++ + G ++KA K
Sbjct: 525 ENKASF---VKGYCEAGLSKKAYK 545
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 148/312 (47%), Gaps = 41/312 (13%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N+ +AL K G V+EA + M +G+ P++++Y++L+DGYCL +V A D+ + M+
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G++ D+ +Y ++++GL + +E + M ++ + + + +I+GLC +
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVK 510
Query: 133 DAWKLVNEMNHR---------------GI-------------PPNVITYNPLLDVLCKSH 164
+A + + + G+ P Y L LC
Sbjct: 511 EAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEG 570
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
++++A ++KK+ ++P ++ CK+ +++AQ +F ++ +G ++ TY+
Sbjct: 571 YLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYT 630
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK-----------KGE--N 271
+MI YC+ +A L M+ G PD VTY +++ K +GE
Sbjct: 631 IMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK 690
Query: 272 EKAEKLLREMVA 283
KA ++LRE A
Sbjct: 691 RKASEVLREFSA 702
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 141/275 (51%), Gaps = 9/275 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ I+V+ALC++GN++EA A+++ + ++ Y + ++G C+ E KA + +
Sbjct: 218 TYAIVVKALCRKGNLEEA----AMLLIEN--ESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 72 VQRG--VTHDVQS-YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ R D+++ +++ G C + A S++ EM D ++ID CK
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A +++M +G+ N + + +L CK A+ K+ + I + Y
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
V D L K+GR+++A E+ Q++ +G +V Y+ +IDGYC +G +AL L+ +M
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+G PD +TY +++ L + G E+ ++ M A
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKA 486
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 138/309 (44%), Gaps = 54/309 (17%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC---LVKEVNKAKDIF 68
T ++++E LC VKEA++ F+ + ++ E + +S + GYC L K+ KA
Sbjct: 495 TNSVIIEGLCFARKVKEAEDFFSSLEQKCPE----NKASFVKGYCEAGLSKKAYKAFVRL 550
Query: 69 NFMVQRGV----------------THDV----QSYTI---------IINGLCKIKMVDEA 99
+ +++ V HDV +Y + +I CK+ V EA
Sbjct: 551 EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREA 610
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
L + M + +I D Y +I C+L A L +M RGI P+V+TY LLD
Sbjct: 611 QVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDR 670
Query: 160 LCK---SHHVD----------RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
K HH +A ++++ GI ++ YTVL+D CK+ L+ A E
Sbjct: 671 YLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAE 730
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD-----AVTYGII 261
+F ++ G ++ Y+ +I Y ++G D A+ L++++ IP AV +
Sbjct: 731 LFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAAL 790
Query: 262 IRALFKKGE 270
F+ GE
Sbjct: 791 KAKRFQYGE 799
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L C+ +++ N L+ + + G + +F + + GL N +Y+ ++ C +
Sbjct: 175 LDCV-VDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLE 233
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD---TICYN 119
+A + +++ V Y INGLC ++A +L+ E+ +K +A
Sbjct: 234 EAAML---LIE---NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLG 287
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
++ G C + A ++ EM G +V ++D CK+ ++ A+ + K+ +
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
G++ N ++++ CK+ +A E F++ L+ Y+V D K G +EA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ +M+ G +PD + Y +I +G+ A L+ EM+ +
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 141/278 (50%), Gaps = 2/278 (0%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD-IFN 69
RT NILV+A C + ++EA N+ M G++P++V++++L Y + A+D I
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ V +V++ I+NG C+ ++EA M + + +NSLI G +
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
++V+ M G+ P+V+T++ L++ + R + + E GI P+++ ++
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES- 248
+L G + G + A++I + G NV Y+ +I G+C G +A+ + KM
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G P+ TY +I + + KAE+LL++M +++
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNV 738
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 150/306 (49%), Gaps = 37/306 (12%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN ++ A + GN+ +A +F M + G +P ++++L+ GY + ++ ++ + + M+
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
Query: 73 QRGVTH-DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL---------- 121
+ + + ++ I++ C + ++EAW+++ +M S + D + +N+L
Sbjct: 452 RDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGST 511
Query: 122 --------------------------IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
++G C+ + +A + M G+ PN+ +N
Sbjct: 512 CTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNS 571
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
L+ + +D ++ +EE G++P++ T++ LM+ VG +K +EI+ D+L G
Sbjct: 572 LIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGG 631
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+ ++ +S++ GY + G ++A ++++M G P+ V Y II GE +KA
Sbjct: 632 IDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAM 691
Query: 276 KLLREM 281
++ ++M
Sbjct: 692 QVYKKM 697
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+VR+ L+ L + G +EA ++F ++++G +P++++Y++L+ K + +
Sbjct: 317 GDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSL 376
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ + + G+ D + IIN + +D+A + +M +N+LI G K
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 128 LERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ + ++ +L++ M + PN T N L+ C ++ A ++ K++ G++P++
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 187 TYTVLMDGLCKVGRLKDAQE-IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ L ++G A++ I +L NVRT +++GYC+EG +EAL +
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 246 MESSGCIPDAVTYGIIIRALF 266
M+ G P+ + +I+
Sbjct: 557 MKELGVHPNLFVFNSLIKGFL 577
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 116/211 (54%), Gaps = 6/211 (2%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV 138
DV+S T ++NGL + EA S+ N + + I Y +L+ L + + L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
+++ G+ P+ I +N +++ +S ++D+A+ + +K++E G +P T+ L+ G K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 199 GRLKDAQEIFQDILIKGYNL--NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAV 256
G+L+++ + D++++ L N RT ++++ +C + +EA ++ KM+S G PD V
Sbjct: 438 GKLEESSRLL-DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 257 TYGIIIRALFKKGENEKAEKLLREMVARSLH 287
T+ + +A + G AE ++ + R LH
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMI---IPRMLH 524
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 137/274 (50%), Gaps = 4/274 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ LV AL ++ + ++ + + K GL+P+ + ++++++ +++A IF M
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA--DTICYNSLIDGLCKLE 129
+ G ++ +I G KI ++E+ LL+ M +++ D C N L+ C
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTC-NILVQAWCNQR 474
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRA-IALIKKIEEQGIQPNMYTY 188
+ +AW +V +M G+ P+V+T+N L + A +I ++ ++PN+ T
Sbjct: 475 KIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTC 534
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+++G C+ G++++A F + G + N+ ++ +I G+ D ++ ME
Sbjct: 535 GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEE 594
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G PD VT+ ++ A G+ ++ E++ +M+
Sbjct: 595 FGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 135/280 (48%), Gaps = 7/280 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + VRT +V C+EG ++EA F M + G+ PN+ ++SL+ G+ + +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ ++ + M + GV DV +++ ++N + + + +M I D ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI-EEQ 179
L G + A +++N+M G+ PNV+ Y ++ C + + +A+ + KK+
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIV 701
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL--FD 237
G+ PN+ TY L+ G + + A+E+ +D+ K +T ++ DG+ G+ +
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSNSN 761
Query: 238 EALILMSKMESSG--CIPDAVTYGIIIRALFKKGENEKAE 275
+A L S +S IP+ + LF KG EK +
Sbjct: 762 DANTLGSSFSTSSKLNIPNNIASS--RSPLFLKGMPEKPK 799
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 5/255 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
T + ++ L K G +A + F M K G++ + ++ +SLMD + A ++F
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-L 263
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ + D +++ I+I+G CK + D+A ++++ M + D + Y S ++ CK
Sbjct: 264 KLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+++ EM G PNV+TY ++ L KS V A+ + +K++E G P+ Y+
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS- 249
L+ L K GR KDA EIF+D+ +G +V Y+ MI + AL L+ +ME
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 250 --GCIPDAVTYGIII 262
C P+ TY ++
Sbjct: 444 GESCSPNVETYAPLL 458
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 3/279 (1%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+ I + RTFNIL+ CK +A+ + +M P++V+Y+S ++ YC +
Sbjct: 265 LFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDF 324
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+ ++ M + G +V +YTI+++ L K K V EA + +M + D Y+SL
Sbjct: 325 RRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE--- 178
I L K R DA ++ +M ++G+ +V+ YN ++ + A+ L+K++E+
Sbjct: 385 IHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEG 444
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ PN+ TY L+ C ++K + ++ +++V TY ++I G C G +E
Sbjct: 445 ESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEE 504
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
A + + G +P T +++ L KK E K+
Sbjct: 505 ACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 28/217 (12%)
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH----SKKIIADTIC----------- 117
Q G H +Y +++ L K + D W L+NEM+ SK + DT+
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
YN +D ++E+S+ G+ + I N L+D L K + ++ A + K+
Sbjct: 219 YNKAVDAFLEMEKSY------------GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ I+P+ T+ +L+ G CK + DA+ + + + + +V TY+ ++ YCKEG F
Sbjct: 267 DT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
++ +M +GC P+ VTY I++ +L K + +A
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEA 362
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 2/221 (0%)
Query: 62 NKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
NKA D F M + GV D + +++ L K ++ A + ++ I D +N
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNI 278
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G CK + DA +++ M P+V+TY ++ CK R +++++ E G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN+ TYT++M L K ++ +A +++ + G + + YS +I K G F +A
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAA 398
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ M + G D + Y +I A +E A +LL+ M
Sbjct: 399 EIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRM 439
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 38/310 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TFN+++ + CKE + EA +VF M+K G+ PN+VS++ ++DG C ++ A +
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 70 ---FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
M V+ + +Y +ING CK +D A + +M + + Y +L+D
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ S +A +L +EM +G+ N + YN ++ L ++ A+++++ + + +Q + +
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 187 TYTVLMDGLCKVGRLKDAQE-----------------------------------IFQDI 211
T +++ GLC+ G +K+A E I +
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
L++G +L+ ++ +IDGY KEG + AL + M + V Y I+ L K+G
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 272 EKAEKLLREM 281
AE ++ M
Sbjct: 518 GAAEAVVNAM 527
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 136/283 (48%), Gaps = 9/283 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQ----GLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+I+ + EG +V + +++ G P++ + SL+ + A ++
Sbjct: 113 ALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEV 170
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
G V + + L + +D W + EM S + + +N +I CK
Sbjct: 171 IEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI---EEQGIQPN 184
+ F+A + M G+ PNV+++N ++D CK+ + A+ L+ K+ + PN
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY +++G CK GRL A+ I D++ G + N RTY ++D Y + G DEAL L
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+M S G + + V Y I+ LF +G+ E A +LR+M ++++
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ 393
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV +D RT+ LV+A + G+ EA + M +GL N V Y+S++ + +
Sbjct: 317 MVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGD 376
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + M + + D + I++ GLC+ V EA ++ KK++ D +C+N+
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L+ + ++ A +++ M +G+ + I++ L+D K ++RA+ + + +
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
N+ Y +++GL K G A+ + + IK ++ TY+ +++ K G +EA
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEAD 552
Query: 241 ILMSKMESSGCIPDA--VTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++SKM+ VT+ I+I L K G EKA+++L+ MV R +
Sbjct: 553 DILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGV 600
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N ++ CK G + A+ + MVK G++ N +Y +L+D Y ++A + + M
Sbjct: 293 TYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM 352
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G+ + Y I+ L ++ A S+L +M+SK + D ++ GLC+
Sbjct: 353 TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + +++ + + +++ +N L+ + + A ++ + QG+ + ++ L
Sbjct: 413 KEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTL 472
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG K G+L+ A EI+ ++ N+ Y+ +++G K G+ A +++ ME
Sbjct: 473 IDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME---- 528
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
I D VTY ++ K G E+A+ +L +M
Sbjct: 529 IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 3/286 (1%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q + F+ LV A + G+ + A V +G ++ + ++ M V E+++
Sbjct: 142 QACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDR 201
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
++ M G +V ++ ++I CK + EA S+ M + + + +N +ID
Sbjct: 202 FWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMID 261
Query: 124 GLCKLERSFDAWKLVNEMNHRG---IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
G CK A +L+ +M + PN +TYN +++ CK+ +D A + + + G
Sbjct: 262 GACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSG 321
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ N TY L+D + G +A + ++ KG +N Y+ ++ EG + A+
Sbjct: 322 VDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAM 381
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++ M S D T I++R L + G ++A + R++ + L
Sbjct: 382 SVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKL 427
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 133/256 (51%), Gaps = 6/256 (2%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
I+V LC+ G VKEA + ++ L +IV +++LM + K++ A I M+ +
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G++ D S+ +I+G K ++ A + + M ++ + YNS+++GL K + A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN--MYTYTVLM 192
+VN M + +++TYN LL+ K+ +V+ A ++ K+++Q + + + T+ +++
Sbjct: 521 EAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ LCK G + A+E+ + ++ +G + TY +I + K ++ + L + G
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 253 PDAVTYGIIIRALFKK 268
P Y I+R L +
Sbjct: 637 PHEHIYLSIVRPLLDR 652
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ ++ + A + M+ QGL + +S+ +L+DGY ++ +A +I++ M++
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
T ++ Y I+NGL K M A +++N M I D + YN+L++ K +
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEE 550
Query: 134 AWKLVNEMNHRGIPPNV--ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A ++++M + +V +T+N +++ LCK ++A ++K + E+G+ P+ TY L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 192 MDGLCKVGRLKDAQEIFQDILIKG 215
+ K + E+ ++++G
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQG 634
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M++Q + + +F L++ KEG ++ A ++ M+K N+V Y+S+++G
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGM 516
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK--KIIADTICY 118
A+ + N M + D+ +Y ++N K V+EA +L++M + + + +
Sbjct: 517 AGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTF 572
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N +I+ LCK A +++ M RG+ P+ ITY L+ K ++ + L +
Sbjct: 573 NIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLIL 632
Query: 179 QGIQPNMYTY 188
QG+ P+ + Y
Sbjct: 633 QGVTPHEHIY 642
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFNI++ LCK G+ ++AK V MV++G+ P+ ++Y +L+ + + K ++ +++
Sbjct: 571 TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYL 630
Query: 72 VQRGVTHDVQSYTIIINGL 90
+ +GVT Y I+ L
Sbjct: 631 ILQGVTPHEHIYLSIVRPL 649
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+NIL+ + G +A +F MVK+ ++P V++ +L+ G C V +A + + M
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 72 VQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
++ GV V Y +I LC+I + A+ L +E + KI D Y++LI L K R
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
S + ++ EM+ +G P+ +TYN L++ C + + A ++ ++ E+G++P++ +Y +
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNM 333
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
++ ++ + ++A +F+D+ +G + + +Y ++ DG C+ F+EA +++ +M G
Sbjct: 334 ILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKG 393
Query: 251 CIP 253
P
Sbjct: 394 YKP 396
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 2/226 (0%)
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
E+ K K+ + + + G D +Y I+I+G + D+A L +EM KK+ + +
Sbjct: 133 ELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 120 SLIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+LI GLCK R +A K+ ++M G+ P V Y L+ LC+ + A L + E
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYE 251
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
I+ + Y+ L+ L K GR + I +++ KG + TY+V+I+G+C E +
Sbjct: 252 GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
A ++ +M G PD ++Y +I+ F+ + E+A L +M R
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 129/245 (52%), Gaps = 3/245 (1%)
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
+P+ +Y+ L+ G + A +F+ MV++ V ++ +I+GLCK V EA
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 102 LLNEMHSKKIIADTI-CYNSLIDGLCKL-ERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
+ ++M + T+ Y SLI LC++ E SF A+KL +E I + Y+ L+
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSF-AFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 160 LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
L K+ + +++++ E+G +P+ TY VL++G C + A + +++ KG +
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
V +Y++++ + + ++EA L M GC PD ++Y I+ L + + E+A +L
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILD 387
Query: 280 EMVAR 284
EM+ +
Sbjct: 388 EMLFK 392
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 37/268 (13%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVK-QGLEPNIVSYSSLMDGYCLVKEVN---KAKD- 66
TF L+ LCK+ VKEA + M+K G+ P + Y+SL+ C + E++ K KD
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 67 -------------------------------IFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
I M ++G D +Y ++ING C
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
+ A +L+EM K + D I YN ++ ++++ +A L +M RG P+ ++Y
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRI 368
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
+ D LC+ + A ++ ++ +G +P + LC+ G+L+ ++ L +G
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS-LHRG 427
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ +SVMI CKE + +++ L+
Sbjct: 428 IAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+DA + ++ L+ +L K G E + M ++G +P+ V+Y+ L++G+C+ + A
Sbjct: 256 VDAAI--YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN 313
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ + MV++G+ DV SY +I+ +IK +EA L +M + DT+ Y + DGL
Sbjct: 314 RVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ + +A +++EM +G P L LC+S ++ +I + +GI +
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDA 432
Query: 186 YTYTVLMDGLCKVGRLKDA 204
++V++ +CK + D+
Sbjct: 433 DVWSVMIPTMCKEPVISDS 451
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 3/176 (1%)
Query: 113 ADTICYNSLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA 171
D YN LI G C FD A KL +EM + + P +T+ L+ LCK V A+
Sbjct: 150 PDACTYNILIHG-CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 172 LIKK-IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
+ ++ G++P ++ Y L+ LC++G L A ++ + ++ YS +I
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
K G +E +++ +M GC PD VTY ++I + ++E A ++L EMV + L
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 139/267 (52%), Gaps = 14/267 (5%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ + TFN+L C+ + K+A + M++ G +P +Y + +D +C V++A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 66 DIFNFMVQRG---VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
D+F+FM+ +G +++ ++I L K +E + L+ M S + D Y +I
Sbjct: 324 DLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+G+C E+ +A+K ++EM+++G PP+++TYN L VLC++ D A+ L ++ E
Sbjct: 384 EGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCA 443
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD----- 237
P++ TY +L+ ++ A + ++ + +V TY MI+ GLFD
Sbjct: 444 PSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN-----GLFDCHRAK 498
Query: 238 EALILMSKMESSGC-IPDAVTYGIIIR 263
EA L+ ++ + G +P V ++R
Sbjct: 499 EACFLLEEVVNKGLKLPYRVFDSFLMR 525
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 148/281 (52%), Gaps = 4/281 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E+ FN+L++ALCK G VKE + + M + ++P+ +++ L G+C V++ KA +
Sbjct: 233 EINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK--KIIADTI-CYNSLIDGL 125
M++ G + +Y I+ C+ MVDEA L + M +K + A T + +I L
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K +++ + ++L+ M G P+V TY +++ +C + VD A + ++ +G P++
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY + LC+ + +A +++ ++ +V+TY+++I + + D A ++
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M+ C+ D TY +I LF ++A LL E+V + L
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGL 512
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 98/208 (47%), Gaps = 1/208 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+TF +++ AL K +E + M+ G P++ +Y +++G C+ ++V++A +
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLD 400
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +G D+ +Y + LC+ + DEA L M + YN LI +++
Sbjct: 401 EMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 460
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A+ EM+ R +V TY +++ L H A L++++ +G++ +
Sbjct: 461 DPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFD 520
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ L +VG LK ++ + + K YN
Sbjct: 521 SFLMRLSEVGNLKAIHKV-SEHMKKFYN 547
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 50/229 (21%)
Query: 99 AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM--NHRGIPPNVITYNPL 156
W+ E +S + IA YN +ID L + +++V +M + V+ + L
Sbjct: 147 TWAGHQEHYSHEPIA----YNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVL 202
Query: 157 LDVLCKSHHVDRAIALIKKIEEQG-----IQPNMYTYTVLMDGLCKVG------------ 199
L++L K + +R + ++K ++ QP + + +L+D LCK G
Sbjct: 203 LEILRK--YCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM 260
Query: 200 -------------------RLKD---AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
R++D A ++ ++++ G+ TY ID +C+ G+ D
Sbjct: 261 RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 238 EALILMSKMESSG---CIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
EA L M + G P A T+ ++I AL K + E+ +L+ M++
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIS 369
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 13/272 (4%)
Query: 21 CKEGNVKEAKNVFAVMVK----QGLEPNIVSYSSLMDGYC---LVKEVNKAKDIFNFMV- 72
C G V E NV +++ + E + ++ MD Y ++K+++ + F
Sbjct: 291 CNPGYVVE--NVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYW 348
Query: 73 ---QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
Q G HD +YT ++ L + K E LL+EM +T+ YN LI +
Sbjct: 349 LKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRAN 408
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A + N+M G P+ +TY L+D+ K+ +D A+ + ++++E G+ P+ +TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
V+++ L K G L A +F +++ +G N+ T+++MI + K ++ AL L M+++
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G PD VTY I++ L G E+AE + EM
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 136/276 (49%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +V L + E + MV+ G +PN V+Y+ L+ Y + +A ++FN M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G D +Y +I+ K +D A + M + DT Y+ +I+ L K
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A +L EM +G PN++T+N ++ + K+ + + A+ L + ++ G QP+ TY+++
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M+ L G L++A+ +F ++ K + + Y +++D + K G D+A M +G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
P+ T ++ + +A LL+ M+A LH
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLH 636
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMD--GYCLV 58
MV Q + TFNI++ K N + A ++ M G +P+ V+YS +M+ G+C
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 59 KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
E +A+ +F M ++ D Y ++++ K VD+AW M + +
Sbjct: 550 LE--EAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTC 607
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
NSL+ ++ R +A+ L+ M G+ P++ TY LL
Sbjct: 608 NSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 6/269 (2%)
Query: 24 GNVKEAKNVFAV------MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVT 77
GN+ AK A+ MV+ G +PN V+Y+ L+ Y +N+A ++FN M + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
D +Y +I+ K +D A + M + + DT Y+ +I+ L K A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
EM +G PN++TYN ++D+ K+ + A+ L + ++ G +P+ TY+++M+ L
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L++A+ +F ++ K + + Y +++D + K G ++A M +G P+ T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
++ + + +A +LL+ M+A L
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 57 LVKEVNKAKDIFNFMV----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
++K++N + F Q G HD +YT ++ L + K LL+EM
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 113 ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
+T+ YN LI + +A + N+M G P+ +TY L+D+ K+ +D A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 173 IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
++++ G+ P+ +TY+V+++ L K G L A ++F +++ +G N+ TY++M+D + K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ AL L M+++G PD VTY I++ L G E+AE + EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV T+N L+ + + + EA NVF M + G +P+ V+Y +L+D +
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A D++ M G++ D +Y++IIN L K + A L EM + + + YN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++D K +A KL +M + G P+ +TY+ +++VL +++ A A+ +++++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P+ Y +L+D K G ++ A + +Q +L G NV T + ++ + + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 ILMSKMESSGCIPDAVTYGIII 262
L+ M + G P TY +++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLL 651
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY ++ L ++ L+ ++ G QPN TY L+ + L +A +F +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
G + TY +ID + K G D A+ + +M++ G PD TY +II L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 272 EKAEKLLREMV 282
A KL EMV
Sbjct: 486 PAAHKLFCEMV 496
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ G + + +TYT ++ L + + ++ +++ G N TY+ +I Y +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+EA+ + ++M+ +GC PD VTY +I K G + A + + M A L
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 6/269 (2%)
Query: 24 GNVKEAKNVFAV------MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVT 77
GN+ AK A+ MV+ G +PN V+Y+ L+ Y +N+A ++FN M + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
D +Y +I+ K +D A + M + + DT Y+ +I+ L K A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
EM +G PN++TYN ++D+ K+ + A+ L + ++ G +P+ TY+++M+ L
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L++A+ +F ++ K + + Y +++D + K G ++A M +G P+ T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
++ + + +A +LL+ M+A L
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 57 LVKEVNKAKDIFNFMV----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
++K++N + F Q G HD +YT ++ L + K LL+EM
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 113 ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
+T+ YN LI + +A + N+M G P+ +TY L+D+ K+ +D A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 173 IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
++++ G+ P+ +TY+V+++ L K G L A ++F +++ +G N+ TY++M+D + K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ AL L M+++G PD VTY I++ L G E+AE + EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV T+N L+ + + + EA NVF M + G +P+ V+Y +L+D +
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A D++ M G++ D +Y++IIN L K + A L EM + + + YN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++D K +A KL +M + G P+ +TY+ +++VL +++ A A+ +++++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P+ Y +L+D K G ++ A + +Q +L G NV T + ++ + + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 ILMSKMESSGCIPDAVTYGIII 262
L+ M + G P TY +++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLL 651
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY ++ L ++ L+ ++ G QPN TY L+ + L +A +F +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
G + TY +ID + K G D A+ + +M++ G PD TY +II L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 272 EKAEKLLREMV 282
A KL EMV
Sbjct: 486 PAAHKLFCEMV 496
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ G + + +TYT ++ L + + ++ +++ G N TY+ +I Y +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+EA+ + ++M+ +GC PD VTY +I K G + A + + M A L
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 138/269 (51%), Gaps = 6/269 (2%)
Query: 24 GNVKEAKNVFAV------MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVT 77
GN+ AK A+ MV+ G +PN V+Y+ L+ Y +N+A ++FN M + G
Sbjct: 372 GNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK 431
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
D +Y +I+ K +D A + M + + DT Y+ +I+ L K A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
EM +G PN++TYN ++D+ K+ + A+ L + ++ G +P+ TY+++M+ L
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L++A+ +F ++ K + + Y +++D + K G ++A M +G P+ T
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
++ + + +A +LL+ M+A L
Sbjct: 612 CNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 57 LVKEVNKAKDIFNFMV----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII 112
++K++N + F Q G HD +YT ++ L + K LL+EM
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 113 ADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
+T+ YN LI + +A + N+M G P+ +TY L+D+ K+ +D A+ +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 173 IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
++++ G+ P+ +TY+V+++ L K G L A ++F +++ +G N+ TY++M+D + K
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ AL L M+++G PD VTY I++ L G E+AE + EM
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 132/262 (50%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV T+N L+ + + + EA NVF M + G +P+ V+Y +L+D +
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A D++ M G++ D +Y++IIN L K + A L EM + + + YN
Sbjct: 450 LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNI 509
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
++D K +A KL +M + G P+ +TY+ +++VL +++ A A+ +++++
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P+ Y +L+D K G ++ A + +Q +L G NV T + ++ + + EA
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 241 ILMSKMESSGCIPDAVTYGIII 262
L+ M + G P TY +++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLL 651
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY ++ L ++ L+ ++ G QPN TY L+ + L +A +F +
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
G + TY +ID + K G D A+ + +M++ G PD TY +II L K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 272 EKAEKLLREMV 282
A KL EMV
Sbjct: 486 PAAHKLFCEMV 496
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%)
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ G + + +TYT ++ L + + ++ +++ G N TY+ +I Y +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+EA+ + ++M+ +GC PD VTY +I K G + A + + M A L
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 143/278 (51%), Gaps = 7/278 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F LV++ C EG +EA + M K+G+ N + Y++LMD Y + + + +F M
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+G+ +Y I+++ + D +LL EM + + Y LI + ++
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 133 D-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
D A M G+ P+ +Y L+ S ++A A +++ ++GI+P++ TYT +
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 192 MDGLCKVGRLKDAQEIFQDIL---IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+D + G EI++ +L IKG + TY+ ++DG+ K+GL+ EA ++S+
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRI---TYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G P +TY +++ A + G++ K +LL+EM A +L
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 6/269 (2%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD-- 66
+VR +N + L +A V+ M K + P+ V+ + L+ L K AK+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILIT--TLRKAGRSAKEVW 329
Query: 67 -IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
IF M ++GV + ++ C + +EA + EM K I ++TI YN+L+D
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + L EM +G+ P+ TYN L+D + D L++++E+ G++PN+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 186 YTYTVLMDGLCKVGRLKD-AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+YT L+ + ++ D A + F + G + +Y+ +I Y G ++A
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEK 273
+M G P TY ++ A + G+ K
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L++A K +++E + +F M +GL+P+ +Y+ LMD Y + + + + M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 73 QRGVTHDVQSYTIIINGLCKIK-MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G+ +V+SYT +I+ + K M D A M + + Y +LI
Sbjct: 442 DLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWH 501
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A+ EM GI P+V TY +LD +S + + + K + + I+ TY L
Sbjct: 502 EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTL 561
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+DG K G +A+++ + G +V TY+++++ Y + G + L+ +M +
Sbjct: 562 LDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Query: 252 IPDAVTYGIIIRALFK 267
PD++TY +I A +
Sbjct: 622 KPDSITYSTMIYAFVR 637
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK-AKDIFNF 70
T+NIL++A + + + M GLEPN+ SY+ L+ Y K+++ A D F
Sbjct: 416 TYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR 475
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + G+ SYT +I+ ++A++ EM + I Y S++D R
Sbjct: 476 MKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAF---RR 532
Query: 131 SFDA------WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
S D WKL M I ITYN LLD K A ++ + + G+QP+
Sbjct: 533 SGDTGKLMEIWKL---MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPS 589
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ TY +LM+ + G+ ++ +++ + TYS MI + + F A
Sbjct: 590 VMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 245 KMESSGCIPDAVTY 258
M SG +PD +Y
Sbjct: 650 MMVKSGQVPDPRSY 663
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKE-AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
++ V+++ L+ A + + + A + F M K GL+P+ SY++L+ Y + KA
Sbjct: 445 LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKA 504
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
F M + G+ V++YT +++ + + + M +KI I YN+L+DG
Sbjct: 505 YASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDG 564
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
K +A +V+E + G+ P+V+TYN L++ + + L+K++ ++P+
Sbjct: 565 FAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPD 624
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
TY+ ++ +V K A + ++ G + R+Y
Sbjct: 625 SITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
+++ L + +M D LL+ + K+ D YN+ I GL +R DAW++ M+
Sbjct: 242 SVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDK 301
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAI-ALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
+ P+ +T L+ L K+ + + + +K+ E+G++ + + L+ C G +
Sbjct: 302 INVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKE 361
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
+A I ++ KG N Y+ ++D Y K +E L ++M G P A TY I++
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 263 RALFKKGENEKAEKLLREM 281
A ++ + + E LLREM
Sbjct: 422 DAYARRMQPDIVETLLREM 440
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 85/180 (47%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ L+ A G ++A F M K+G++P++ +Y+S++D + + K +I+ M
Sbjct: 487 SYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLM 546
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++ + +Y +++G K + EA +++E + + YN L++ + +
Sbjct: 547 LREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQD 606
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+L+ EM + P+ ITY+ ++ + RA K + + G P+ +Y L
Sbjct: 607 AKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I V T+ +++A + G+ + ++ +M+++ ++ ++Y++L+DG+
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+A+D+ + + G+ V +Y +++N + + LL EM + + D+I Y++
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYST 630
Query: 121 LIDGLCK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVL 160
+I + +R+F K+ M G P+ +Y L +L
Sbjct: 631 MIYAFVRVRDFKRAFFYHKM---MVKSGQVPDPRSYEKLRAIL 670
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 126/237 (53%), Gaps = 1/237 (0%)
Query: 48 YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH 107
Y+ ++D V++ + A + + M R V ++++TI+I + + EA N M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 108 SKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD 167
+ D I ++ +I L + R+ +A + + R P+VI Y L+ C++ +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 168 RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
A + K+++ GI+PN+YTY++++D LC+ G++ A ++F D+L G N T++ ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+ K G ++ L + ++M+ GC PD +TY +I A + E A K+L M+ +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 134/276 (48%), Gaps = 1/276 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ + TF IL+ + G EA + F M G P+ +++S ++ + ++A+
Sbjct: 182 VEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQ 241
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F+ + R DV YT ++ G C+ + EA + EM I + Y+ +ID L
Sbjct: 242 SFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDAL 300
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C+ + A + +M G PN IT+N L+ V K+ ++ + + ++++ G +P+
Sbjct: 301 CRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDT 360
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY L++ C+ L++A ++ ++ K +N T++ + K+ + A + SK
Sbjct: 361 ITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK 420
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M + C P+ VTY I++R + K+ +EM
Sbjct: 421 MMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM 456
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 135/270 (50%), Gaps = 1/270 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F+I++ L ++ EA++ F + K EP+++ Y++L+ G+C E+++A+ +F M
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G+ +V +Y+I+I+ LC+ + A + +M + I +N+L+ K R+
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
++ N+M G P+ ITYN L++ C+ +++ A+ ++ + ++ + N T+ +
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF 402
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ K + A ++ ++ N TY++++ + D L + +M+
Sbjct: 403 RYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVE 462
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMV 282
P+ TY +++ G A KL +EMV
Sbjct: 463 PNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 136/286 (47%), Gaps = 34/286 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L I+ V T++I+++ALC+ G + A +VFA M+ G PN +++++LM +
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
K ++N M + G D +Y +I C+ + ++ A +LN M KK + +N+
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+ + K A ++ ++M PN +TYN L+ + S D + + K+++++
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++PN+ TY +L+ C +G +A ++F++ M++ C
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKE---------------MVEEKC--------- 496
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P Y +++ L + G+ +K E+L+ +M+ + L
Sbjct: 497 ----------LTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 130/262 (49%), Gaps = 4/262 (1%)
Query: 24 GNVKE---AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDV 80
G V++ A ++ +M + +E +I +++ L+ Y ++A FN M G D
Sbjct: 162 GKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDK 221
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNE 140
+++I+I+ L + + EA S + + + D I Y +L+ G C+ +A K+ E
Sbjct: 222 IAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 141 MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGR 200
M GI PNV TY+ ++D LC+ + RA + + + G PN T+ LM K GR
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
+ +++ + G + TY+ +I+ +C++ + A+ +++ M C +A T+
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 261 IIRALFKKGENEKAEKLLREMV 282
I R + KK + A ++ +M+
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMM 422
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ Y ++D KV + A + + + +++ T++++I Y + GL EA+ ++
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNR 211
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
ME GC+PD + + I+I L +K +A+ + R
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR 250
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 12 TFNILVEALCKEGNVKE--AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+FN L+ A K G + A + ++ GL P+ ++Y++L+ ++ A +F
Sbjct: 262 SFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE 321
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M D+ +Y +I+ + + EA L E+ K D + YNSL+ +
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARER 381
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE-QGIQPNMYTY 188
+ ++ +M G + +TYN ++ + K +D A+ L K ++ G P+ TY
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
TVL+D L K R +A + ++L G ++TYS +I GY K G +EA S M
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
SG PD + Y +++ L + E KA L R+M++
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS 536
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 139/276 (50%), Gaps = 4/276 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ ++EA K+ ++A++V + + G P++ +++SLM Y +A+ IFN M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK--KIIADTICYNSLIDGLCKLER 130
+ G + V+S I+++ LC ++E + ++ E+ KI +I ++D +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILL--MLDAFARAGN 872
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
F+ K+ + M G P + Y ++++LCK V A ++ ++EE + + +
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
++ + K +++Q I G + TY+ +I YC++ +E +LM +M + G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
P TY +I A K+ E+AE+L E++++ L
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N L+ A ++ N+ A VF M +P++ +Y++++ Y +A+ +F +
Sbjct: 299 TYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMEL 358
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G D +Y ++ + + ++ + +M D + YN++I K +
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 132 FDAWKLVNEMNH-RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A +L +M G P+ ITY L+D L K++ A AL+ ++ + GI+P + TY+
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ G K G+ ++A++ F +L G + YSVM+D + +A L M S G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P Y ++I L K+ ++ +K +R+M
Sbjct: 539 HTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 131/272 (48%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + NIL+ ALC +G ++E V + G + + S ++D + + + K I++
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M G ++ Y ++I LCK K V +A +++EM + +NS++ +E
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIE 941
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
++ + G+ P+ TYN L+ + C+ + L++++ G+ P + TY
Sbjct: 942 DYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYK 1001
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ K L+ A+++F+++L KG L+ Y M+ G +A L+ M+++
Sbjct: 1002 SLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNA 1061
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P T +++ + G ++AEK+L +
Sbjct: 1062 GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Query: 48 YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDE--AWSLLNE 105
Y+++M Y + +KA+++ + M QRG D+ S+ +IN K + A LL+
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSH 164
+ + + D I YN+L+ C + + D A K+ +M P++ TYN ++ V +
Sbjct: 288 VRNSGLRPDAITYNTLLSA-CSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
A L ++E +G P+ TY L+ + + +E++Q + G+ + TY+
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 225 VMIDGYCKEGLFDEALILMSKMES-SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+I Y K+G D AL L M+ SG PDA+TY ++I +L K +A L+ EM+
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 1/237 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N ++ + G EA+ +F + +G P+ V+Y+SL+ + + K K+++ M
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS-KKIIADTICYNSLIDGLCKLER 130
+ G D +Y II+ K +D A L +M D I Y LID L K R
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ +A L++EM GI P + TY+ L+ K+ + A + G +P+ Y+V
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
++D L + + A +++D++ G+ + Y +MI G KE D+ + ME
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 122/255 (47%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+R + +++E LCK V++A+ + + M + + + ++S++ Y +++ K ++
Sbjct: 892 IRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQ 951
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ + G+ D +Y +I C+ + +E + L+ +M + + Y SLI K +
Sbjct: 952 RIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A +L E+ +G+ + Y+ ++ + S +A L++ ++ GI+P + T
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+LM G ++A+++ ++ L YS +ID Y + ++ + + +M+
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Query: 250 GCIPDAVTYGIIIRA 264
G PD + +RA
Sbjct: 1132 GLEPDHRIWTCFVRA 1146
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 113/221 (51%), Gaps = 5/221 (2%)
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A +IF + V VQ Y ++ + +A L++ M + + D I +N+LI+
Sbjct: 210 AVEIFT-RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN 268
Query: 124 GLCK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
K L + A +L++ + + G+ P+ ITYN LL + ++D A+ + + +E
Sbjct: 269 ARLKSGGLTPNL-AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
QP+++TY ++ + G +A+ +F ++ +KG+ + TY+ ++ + +E ++
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ +M+ G D +TY II K+G+ + A +L ++M
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQS-YTII 86
EA VF+ + G E + S++ YC + A + N +G YT I
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
I K K+ +A S++ + D +NSL+ + A + N M G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P V + N LL LC ++ +++++++ G + + + +++D + G + + ++
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
I+ + GY +R Y +MI+ CK +A I++S+ME +
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 91 CKIKMVDEAWSLLNEMHSKKI-IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPN 149
CK+ + A ++N+ +K A + Y +I+ K + A +V + G P+
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
+ T+N L+ + +RA A+ + G P + + +L+ LC GRL++ + +
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ G+ ++ + +M+D + + G E + S M+++G +P Y ++I L K
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 270 ENEKAEKLLREM 281
AE ++ EM
Sbjct: 907 RVRDAEIMVSEM 918
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%), Gaps = 9/243 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVK-QGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
T+N ++ K+G + A ++ M G P+ ++Y+ L+D +A + +
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M+ G+ +Q+Y+ +I G K +EA + M D + Y+ ++D L +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTYT 189
+ AW L +M G P+ Y ++ L K + D I+ +EE G+ P + +
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP-LEISS 582
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS--KME 247
VL+ G C A + + GY L T ++ Y G EA L+ K
Sbjct: 583 VLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEH 638
Query: 248 SSG 250
+SG
Sbjct: 639 ASG 641
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 146/287 (50%), Gaps = 7/287 (2%)
Query: 2 VLQCID-----AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGY 55
+ +C+D + F ++ + G+ + + +F M +Q +PN Y+ ++
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 56 CLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT 115
++K ++F+ M +GV+ V SYT +IN + + + LL+ M ++KI
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 116 ICYNSLIDGLCKLERSFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+ YN++I+ + ++ L EM H GI P+++TYN LL D A + +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
+ + GI P++ TY+ L++ K+ RL+ ++ ++ G ++ +Y+V+++ Y K G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
EA+ + +M+++GC P+A TY +++ + G + +L EM
Sbjct: 332 SIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%), Gaps = 3/285 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M Q + V ++ L+ A + G + + + M + + P+I++Y+++++ C
Sbjct: 167 MPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGG 225
Query: 61 VNKAK--DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
++ +F M G+ D+ +Y +++ + DEA + M+ I+ D Y
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTY 285
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+ L++ KL R L+ EM G P++ +YN LL+ KS + A+ + +++
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
G PN TY+VL++ + GR D +++F ++ + + TY+++I+ + + G F E
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKE 405
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+ L M PD TY II A K G +E A K+L+ M A
Sbjct: 406 VVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 137/282 (48%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I ++ T+N L+ A G EA+ VF M G+ P++ +YS L++ + ++
Sbjct: 238 MRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR 297
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ K D+ M G D+ SY +++ K + EA + ++M + + Y+
Sbjct: 298 LEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSV 357
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L++ + R D +L EM P+ TYN L++V + + + L + E+
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
I+P+M TY ++ K G +DA++I Q + + + Y+ +I+ + + L++EAL
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ + M G P T+ ++ + + G +++E +L +V
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 135/270 (50%), Gaps = 1/270 (0%)
Query: 6 IDAEVRTFNILVEALCKEG-NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
I + T+N ++ A + G + + +FA M +G++P+IV+Y++L+ + ++A
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ +F M G+ D+ +Y+ ++ K++ +++ LL EM S + D YN L++
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
K +A + ++M G PN TY+ LL++ +S D L +++ P+
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY +L++ + G K+ +F D++ + ++ TY +I K GL ++A ++
Sbjct: 387 AATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQ 446
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKA 274
M ++ +P + Y +I A + E+A
Sbjct: 447 YMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ ++N+L+EA K G++KEA VF M G PN +YS L++ + + + +F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M D +Y I+I + E +L ++M + I D Y +I K
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
DA K++ M I P+ Y +++ ++ + A+ + E G P++ T+
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ + G +K+++ I ++ G N T++ I+ Y + G F+EA+ ME
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 249 SGCIPDAVT 257
S C PD T
Sbjct: 556 SRCDPDERT 564
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
YTI+I+ L + ++D+ + +EM S+ + Y +LI+ + R + +L++ M
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRA--IALIKKIEEQGIQPNMYTYTVLMDGLCKVGR 200
+ I P+++TYN +++ C +D + L ++ +GIQP++ TY L+ G
Sbjct: 204 NEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
+A+ +F+ + G ++ TYS +++ + K ++ L+ +M S G +PD +Y +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 261 IIRALFKKGENEKAEKLLREMVA 283
++ A K G ++A + +M A
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQA 345
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 126/273 (46%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ T++ LVE K +++ ++ M G P+I SY+ L++ Y + +A +F
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M G T + +Y++++N + D+ L EM S D YN LI+ +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ L ++M I P++ TY ++ K + A +++ + I P+ Y
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T +++ + ++A F + G N ++ T+ ++ + + GL E+ ++S++
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
SG + T+ I A + G+ E+A K +M
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDM 553
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 128/316 (40%), Gaps = 36/316 (11%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + T+NIL+E + G KE +F MV++ +EP++ +Y ++ A+
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
I +M + ++YT +I + + +EA N MH ++SL+
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN-- 184
+ ++ +++ + GIP N T+N ++ + + A+ +E+ P+
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 185 -------MYTYTVLMDG-----------------LC---------KVGRLKDAQEIFQDI 211
+Y++ L+D +C K R D E+ +++
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Query: 212 LIKGYNLNVRTYSVMIDG-YCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
L + + MI G Y + + ++ K+ S GC Y ++ AL+ G+
Sbjct: 624 LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQ 683
Query: 271 NEKAEKLLREMVARSL 286
E+A ++L E R L
Sbjct: 684 KERAARVLNEATKRGL 699
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L+ ALC G+V E + +KQGL+P Y+ L+ G+C + ++ + M+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ Y II GLC K EA+ + + K D + Y ++I G C+ A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
KL EM +G+ PN YN ++ K + A ++ G M + ++ G
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
C G+ +A EIF+++ G N TY+ +I G+CKE ++ L L ++++ G P
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 256 VTYGIIIRAL 265
+ Y ++R L
Sbjct: 459 MAYAALVRNL 468
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 13/275 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGY--CLVKE--VNKAKDI 67
+ NIL AL VK AK + + G +P +L++ Y CL +E V +A ++
Sbjct: 115 SLNILFGALLDGKAVKAAK---SFLDTTGFKPE----PTLLEQYVKCLSEEGLVEEAIEV 167
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+N + G++ V + ++ G K + +D W L EM + ++ I LI LC
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCD 225
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ ++L+ + +G+ P Y L+ C+ + ++ + P+MY
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYI 285
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y ++ GLC + +A IF+++ KGY + Y+ MI G+C++G A L +M
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G P+ Y ++I FK+GE E EM+
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q +D + L+ C+ GN V M+ P++ Y ++ G C+ K+ +
Sbjct: 242 QGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLE 301
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A IF + +G D YT +I G C+ + A L EM K + + YN +I
Sbjct: 302 AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIH 361
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G K NEM G +++ N ++ C D A + K + E G+ P
Sbjct: 362 GHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTP 421
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
N TY L+ G CK +++ ++++++ G + Y+ ++
Sbjct: 422 NAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ ++ C++G + A+ ++ M+K+G+ PN +Y+ ++ G+ E++ + +N M+
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G + S +I G C DEA+ + M + + I YN+LI G CK +
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL 172
KL E+ G+ P+ + Y L+ L S V ++ L
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 141/276 (51%), Gaps = 5/276 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ ++ T+N LV + C+ G +KEA ++ +M ++ + P++V+Y+SL+ G C V +A
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAH 326
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
F+ MV RG+ D SY +I CK M+ ++ LL+EM ++ D +++G
Sbjct: 327 QTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
Query: 126 CKLERSFDAWKLVNEMNHR--GIPPNVITYNPLLDVLCKSHHVDRAIALIKK-IEEQGIQ 182
+ R A V E+ IP V + L+ LC+ A L+ + IEE+G +
Sbjct: 387 VREGRLLSAVNFVVELRRLKVDIPFEVCDF--LIVSLCQEGKPFAAKHLLDRIIEEEGHE 444
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
TY L++ L + +++A + + + L+ +TY +I C+ G EA L
Sbjct: 445 AKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESL 504
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
M++M S PD+ G ++ K+ + +KAE+LL
Sbjct: 505 MAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 136/287 (47%), Gaps = 36/287 (12%)
Query: 31 NVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGL 90
V++VM + G+ PN +++ L + +C + D M + G D+ +Y +++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
C+ + EA+ L M+ ++++ D + Y SLI GLCK R +A + + M RGI P+
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEI--- 207
++YN L+ CK + ++ L+ ++ + P+ +T V+++G + GRL A
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 208 ---------FQ--DILI----------------------KGYNLNVRTYSVMIDGYCKEG 234
F+ D LI +G+ TY+ +I+ +
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+EAL+L K+++ + DA TY +I L + G N +AE L+ EM
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 18/265 (6%)
Query: 40 GLEPNIVSYSSL-------------MDGYCLVKEVNKAK---DIFNFMVQRG--VTHDVQ 81
G PN+ +Y L M C + E+ K D+F +V D
Sbjct: 108 GKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPV 167
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM 141
+ +++ G K+ +V+E + + E+ + N L++GL KL+ D W++ + M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
GI PN T+N L +V C + ++K+EE+G +P++ TY L+ C+ GRL
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 202 KDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
K+A +++ + + ++ TY+ +I G CK+G EA +M G PD ++Y +
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTL 347
Query: 262 IRALFKKGENEKAEKLLREMVARSL 286
I A K+G ++++KLL EM+ S+
Sbjct: 348 IYAYCKEGMMQQSKKLLHEMLGNSV 372
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 135/264 (51%), Gaps = 5/264 (1%)
Query: 11 RTFNILVEALCKE---GNVKEAKNVFAVMVKQGLEPN--IVSYSSLMDGYCLVKEVNKAK 65
+ F + ++ LC+ + KE +VF V+V E N V + L+ GY + V +
Sbjct: 127 KKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGF 186
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F ++ G + V + ++NGL K+ ++++ W + + M I +T +N L +
Sbjct: 187 RVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVF 246
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + + +M G P+++TYN L+ C+ + A L K + + + P++
Sbjct: 247 CNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDL 306
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT L+ GLCK GR+++A + F ++ +G + +Y+ +I YCKEG+ ++ L+ +
Sbjct: 307 VTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHE 366
Query: 246 MESSGCIPDAVTYGIIIRALFKKG 269
M + +PD T +I+ ++G
Sbjct: 367 MLGNSVVPDRFTCKVIVEGFVREG 390
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 133/292 (45%), Gaps = 39/292 (13%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ L++ LCK+G V+EA F MV +G++P+ +SY++L+ YC + ++K + + M
Sbjct: 308 TYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI-IADTICYNSLIDGLCKLER 130
+ V D + +I+ G + + A + + E+ K+ I +C + LI LC+ +
Sbjct: 368 LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC-DFLIVSLCQEGK 426
Query: 131 SFDAW----KLVNEMNHRGIPP---NVI-----------------------------TYN 154
F A +++ E H P N+I TY
Sbjct: 427 PFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYR 486
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+ LC+ A +L+ ++ + ++P+ + L+ G CK A+ + ++
Sbjct: 487 ALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAME 546
Query: 215 GYNLNVRTYSVMIDGYCKEGL-FDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+ +Y+ ++ C+ G + +AL L +M+ G +P+ +T +I+ L
Sbjct: 547 FRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+V FN+L++A ++ KEA++++ +++ P +Y+ L+ YC+ + +A+
Sbjct: 151 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 210
Query: 66 DIFNFMVQRGV---THDVQSYTIIINGLCKIKM-VDEAWSLLNEMHSKKIIADTICYNSL 121
+ M V T V Y I GL K K +EA + M + T YN +
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 270
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
I+ K +S+ +WKL EM PN+ TY L++ + ++A + ++++E G+
Sbjct: 271 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 330
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
+P++Y Y LM+ + G A EIF + G + +Y++M+D Y + GL +A
Sbjct: 331 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 390
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ +M+ G P ++ +++ A K + K E +++EM
Sbjct: 391 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 131/270 (48%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ LV A +EG ++A+ +F + + GLEP++ Y++LM+ Y A +IF+ M
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G D SY I+++ + + +A ++ EM I + L+ K
Sbjct: 361 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 420
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+V EM+ G+ P+ N +L++ + + ++ ++E ++ TY +L
Sbjct: 421 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 480
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ K G L+ +E+F ++ K + +V T++ I Y ++ L+ + L + +M SGC
Sbjct: 481 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 540
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD T +++ A + + E+ +LR M
Sbjct: 541 APDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 127/274 (46%), Gaps = 4/274 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVS---YSSLMDGYCLVK-EVNKAKDI 67
T+ +L++A C G ++ A+ V M + P + Y++ ++G K +A D+
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F M + ++Y ++IN K +W L EM S + + Y +L++ +
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A ++ ++ G+ P+V YN L++ ++ + A + ++ G +P+ +
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +++D + G DA+ +F+++ G ++++ +++ Y K + ++ +M
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 431
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+G PD ++ + G+ K EK+L EM
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+V FN+L++A ++ KEA++++ +++ P +Y+ L+ YC+ + +A+
Sbjct: 173 FQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAE 232
Query: 66 DIFNFMVQRGV---THDVQSYTIIINGLCKIKM-VDEAWSLLNEMHSKKIIADTICYNSL 121
+ M V T V Y I GL K K +EA + M + T YN +
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLM 292
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
I+ K +S+ +WKL EM PN+ TY L++ + ++A + ++++E G+
Sbjct: 293 INLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGL 352
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
+P++Y Y LM+ + G A EIF + G + +Y++M+D Y + GL +A
Sbjct: 353 EPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 412
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ +M+ G P ++ +++ A K + K E +++EM
Sbjct: 413 VFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 131/270 (48%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ LV A +EG ++A+ +F + + GLEP++ Y++LM+ Y A +IF+ M
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G D SY I+++ + + +A ++ EM I + L+ K
Sbjct: 383 QHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDV 442
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+V EM+ G+ P+ N +L++ + + ++ ++E ++ TY +L
Sbjct: 443 TKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNIL 502
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ K G L+ +E+F ++ K + +V T++ I Y ++ L+ + L + +M SGC
Sbjct: 503 INIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC 562
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD T +++ A + + E+ +LR M
Sbjct: 563 APDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 127/274 (46%), Gaps = 4/274 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVS---YSSLMDGYCLVK-EVNKAKDI 67
T+ +L++A C G ++ A+ V M + P + Y++ ++G K +A D+
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
F M + ++Y ++IN K +W L EM S + + Y +L++ +
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
A ++ ++ G+ P+V YN L++ ++ + A + ++ G +P+ +
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 393
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +++D + G DA+ +F+++ G ++++ +++ Y K + ++ +M
Sbjct: 394 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMS 453
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+G PD ++ + G+ K EK+L EM
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 149/278 (53%), Gaps = 3/278 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +RTFN+LV+A CK+ V+EA V M + G+ P+ V+Y+++ Y E +A+
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 D--IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +++ + ++ I++ G C+ V + + M ++ A+ + +NSLI+
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G ++ +++ M + +VITY+ +++ + ++++A + K++ + G++P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
+ + Y++L G + K A+E+ + ++++ NV ++ +I G+C G D+A+ +
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVF 422
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+KM G P+ T+ ++ + + KAE++L+ M
Sbjct: 423 NKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 40/313 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR+ L+ L + G EA+ VF + + G P+++SY++L+ + K+ I +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG---LC 126
+ Q G D + +IN + +++A L +M + T YN+LI G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K ERS + L+ E + + PN+ T+N L+ CK V+ A ++KK+EE G++P+
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 187 TYTVLMDGLCKVGRLKDAQ-EIFQDILIK-GYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY + + G A+ E+ + +++K N RT +++ GYC+EG + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 245 KMES--------------SGCI---------------------PDAVTYGIIIRALFKKG 269
+M+ +G + D +TY ++ A G
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 270 ENEKAEKLLREMV 282
EKA ++ +EMV
Sbjct: 345 YMEKAAQVFKEMV 357
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F ++ C G++ +A VF M K G+ PNI ++ +LM GY VK+ KA+++ M
Sbjct: 402 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 461
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI 111
GV + ++ ++ + DE+ +N + K I
Sbjct: 462 GCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 500
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 142/280 (50%), Gaps = 2/280 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+T+ + +EALCK + A +V M+K G+ +++ +C + +A ++
Sbjct: 266 AKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYE 325
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIK-MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ + + +I LCK + A +L ++ + ++ +I LC++
Sbjct: 326 LAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRM 385
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
DA L+ +M +G P +N ++ K+ +D A ++K +E +G++P++YTY
Sbjct: 386 RNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTY 445
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
TV++ G K G + +AQEI + K L+ TY +I GYCK +DEAL L+++M+
Sbjct: 446 TVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDR 505
Query: 249 SGCIPDAVTYGIIIRAL-FKKGENEKAEKLLREMVARSLH 287
G P+A Y +I++ K + EKAE L EM + LH
Sbjct: 506 FGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLH 545
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
++ F+ ++ +LC+ NVK+AK + M+ +G P ++ ++ ++++AK++
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M RG+ DV +YT+II+G K M+DEA +L E K + Y++LI G CK+E
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC-KSHHVDRAIALIKKIEEQGIQPN 184
+A KL+NEM+ G+ PN YN L+ C K+ ++A L ++++++G+ N
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 38/225 (16%)
Query: 100 WSLLNEMHSKKI--IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
W L+ E+ K+ + + N LI KL +S A+ + ++ G PN TY L
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTL 273
Query: 158 DVLCKSHHVDRAIALIKKIEEQGI------QPNMYTY----------------------- 188
+ LCK +D A ++ +K+ + G+ N+ T+
Sbjct: 274 EALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKS 333
Query: 189 ------TVLMDGLCKV-GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
L+ LCK G + AQE+ D+ + ++ +S +I C+ +A
Sbjct: 334 LPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKA 393
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
L+ M S G P + +++ A K G+ ++A+++L+ M +R L
Sbjct: 394 LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 438
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + + +V T+ +++ K G + EA+ + A K+ + + V+Y +L+ GYC ++E
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD--EAWSLLNEMHSKKIIADTI 116
++A + N M + GV + Y +I C +K +D +A L EM K + + I
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFC-LKALDWEKAEVLFEEMKQKGLHLNAI 549
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 119/226 (52%), Gaps = 3/226 (1%)
Query: 12 TFNILVEALCK--EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
TF IL+ C+ + ++ V +MV GLEP+ V+ + C V++AKD+
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKL 128
+ ++ D +Y ++ LCK K + + ++EM + D + + LID +C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +A LV+++ + G P+ YN ++ C A+ + KK++E+G++P+ TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
L+ GL K GR+++A+ + ++ GY + TY+ +++G C++G
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 3/235 (1%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKE--VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
+ P ++ L+ C + ++ + N MV G+ D + I + LC+
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYN 154
VDEA L+ E+ K DT YN L+ LCK + ++ V+EM + + P+++++
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+D +C S ++ A+ L+ K+ G +P+ + Y +M G C + + +A +++ + +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEE 294
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
G + TY+ +I G K G +EA + + M +G PD TY ++ + +KG
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 112/206 (54%), Gaps = 13/206 (6%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV ++ + T +I V +LC+ G V EAK++ + ++ P+ +Y+ L+ C K+
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 61 -------VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA 113
V++ +D F+ V D+ S+TI+I+ +C K + EA L++++ +
Sbjct: 210 LHVVYEFVDEMRDDFD------VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKP 263
Query: 114 DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALI 173
D YN+++ G C L + +A + +M G+ P+ ITYN L+ L K+ V+ A +
Sbjct: 264 DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYL 323
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVG 199
K + + G +P+ TYT LM+G+C+ G
Sbjct: 324 KTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 6/267 (2%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEP-NIVSYSSLMDGYCLVKEVNKAKDIFNFMV--QRGVTH 78
K N+ +AK++F + P ++ ++S++ Y + VN +F ++ Q
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 79 DVQSYTIIINGLCKIK--MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWK 136
++ I+++ C+ + +LN M + + D + + + LC+ R +A
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTYTVLMDGL 195
L+ E+ + PP+ TYN LL LCK + + ++ + ++P++ ++T+L+D +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
C L++A + + G+ + Y+ ++ G+C EA+ + KM+ G PD
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMV 282
+TY +I L K G E+A L+ MV
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMV 327
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 133/268 (49%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR FNIL+ + +K+A+ ++ M ++P +V+Y +L++GYC ++ V A ++
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + + + II+GL + + EA ++ + + YNSL+ CK
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAG 369
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A K++ M RG+ P TYN K + + + L K+ E G P+ TY
Sbjct: 370 DLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYH 429
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+++ LC+ G+L A ++ +++ +G + ++ T +++I C+ + +EA
Sbjct: 430 LILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRR 489
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKL 277
G IP +T+ +I L KG ++ A++L
Sbjct: 490 GIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 132/261 (50%), Gaps = 3/261 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAK---NVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
E+R +L++ALCKEG+V+EA + P++ ++ L++G+ +++ +A
Sbjct: 210 TELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ ++ M V V +Y +I G C+++ V A +L EM ++ + + +N +IDG
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L + R +A ++ P ++TYN L+ CK+ + A ++K + +G+ P
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPT 389
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY K + ++ ++ ++ G++ + TY +++ C++G A+ +
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 245 KMESSGCIPDAVTYGIIIRAL 265
+M++ G PD +T ++I L
Sbjct: 450 EMKNRGIDPDLLTTTMLIHLL 470
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 141/317 (44%), Gaps = 50/317 (15%)
Query: 17 VEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM-VQRG 75
+ L + +V ++ + + + G+EP++ +L D L +F + ++ G
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDR--LSSSPMLLHSVFKWAEMKPG 130
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLL-----NEMHSKKIIADT--------------- 115
T + ++N LCK + + AWSL+ ++ S + ADT
Sbjct: 131 FTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQ 190
Query: 116 --------------ICYNS--------LIDGLCK----LERSFDAWKLVNEMNHRGIPPN 149
+C ++ L+D LCK E S ++ M+ + P+
Sbjct: 191 QAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWV-PS 249
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
V +N LL+ +S + +A L ++++ ++P + TY L++G C++ R++ A E+ +
Sbjct: 250 VRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLE 309
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ + +N ++ +IDG + G EAL +M + P VTY +++ K G
Sbjct: 310 EMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAG 369
Query: 270 ENEKAEKLLREMVARSL 286
+ A K+L+ M+ R +
Sbjct: 370 DLPGASKILKMMMTRGV 386
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 65/125 (52%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + +D T+N + K +E N++ +++ G P+ ++Y ++ C +
Sbjct: 381 MMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGK 440
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++ A + M RG+ D+ + T++I+ LC+++M++EA+ + + II I +
Sbjct: 441 LSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKM 500
Query: 121 LIDGL 125
+ +GL
Sbjct: 501 IDNGL 505
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 135/266 (50%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+ C+ N+ EA ++ M+ QGL+P+IV+++ +++G ++ + A +F+ M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G +V+SYTI+I CK ++ A ++M + D Y LI G ++
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++L+ EM +G PP+ TYN L+ ++ + A + K+ + I+P+++T+ ++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M + + ++++++ KG + +Y+V+I G EG EA + +M G
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKL 277
+ Y + G+ E E+L
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T N L+++L + KEA+ +F + K+ PN+++Y+ L++G+C V+ + +A I+N
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ +G+ D+ ++ +++ GL + + +A L + M SK + Y +I CK
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A + ++M G+ P+ Y L+ +D L+K+++E+G P+ TY
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ + + A I+ ++ ++ T+++++ Y ++ + +M
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PD +Y ++IR L +G++ +A + L EM+ + +
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 133/274 (48%), Gaps = 9/274 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q + ++ N+++E L + +A +F VM +G PN+ SY+ ++ +C
Sbjct: 324 MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + F+ MV G+ D YT +I G K +D + LL EM K D YN+
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI + + A ++ N+M I P++ T+N ++ + + + A+ +++ ++G
Sbjct: 444 LIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKG 503
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG---LFD 237
I P+ +YTVL+ GL G+ ++A +++L KG + Y+ + + G +F+
Sbjct: 504 ICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFE 563
Query: 238 EALILMSKMESSGCIPDA---VTYGIIIRALFKK 268
E L + + SG A + + R FK+
Sbjct: 564 E---LAQRAKFSGKFAAAEIFARWAQMTRRRFKQ 594
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 119/244 (48%), Gaps = 2/244 (0%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
+QG + +Y+S+M ++ + M +G+ ++++TI + K
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
+A + M K N L+D L + + +A L +++ R PN++TY LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ C+ ++ A + + +QG++P++ + V+++GL + + DA ++F + KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
NVR+Y++MI +CK+ + A+ M SG PDA Y +I + + + +L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 278 LREM 281
L+EM
Sbjct: 426 LKEM 429
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV------------ 190
+G + TYN ++ +L K+ + +++++++ +G+ M T+T+
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 191 -----------------------LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
L+D L + K+AQ +F D L + + N+ TY+V++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLF-DKLKERFTPNMMTYTVLL 305
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+G+C+ EA + + M G PD V + +++ L + + A KL M ++
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 67/337 (19%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F ++ C+ G V EA V +M+ G+ ++ +S L+ G+ E KA D+FN M+
Sbjct: 215 FGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMI 274
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
Q G + ++ +YT +I G + MVDEA+++L+++ S+ + D + N +I +L R
Sbjct: 275 QIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFE 334
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD------------------------- 167
+A K+ + R + P+ T+ +L LC S D
Sbjct: 335 EARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCF 394
Query: 168 -------RAIALIKKIEEQGIQPNMYTYTVLMDGLCK----------------------- 197
A+ ++ + + + YTYTV + LC+
Sbjct: 395 SKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDA 454
Query: 198 ------------VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+G+ A +F+ +++ Y L+V +Y+V I G + +EA L
Sbjct: 455 HFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCD 514
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
M+ G P+ TY II L K+ E EK K+LRE +
Sbjct: 515 MKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECI 551
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 126/279 (45%), Gaps = 6/279 (2%)
Query: 12 TFNILVEALCKEGNVKE---AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+F+I + C G + K V M+ +G PN + ++ C V++A +
Sbjct: 176 SFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVV 235
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M+ G++ V ++++++G + +A L N+M + + Y SLI G L
Sbjct: 236 GLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDL 295
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A+ +++++ G+ P+++ N ++ + + A + +E++ + P+ YT+
Sbjct: 296 GMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ LC G+ I I G + ++ T +++ + + K G AL ++S M
Sbjct: 356 ASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSY 412
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
D TY + + AL + G A K+ + ++ H
Sbjct: 413 KDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKH 451
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 19/269 (7%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R F +L+E + +A V+ M G PN + + +MD + VN A +IF
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 71 MVQRGVTHDVQSYTIIINGLCK---------IKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+ R + S+ I ++ C +K+V L M + + + +
Sbjct: 169 IRFR----NFFSFDIALSHFCSRGGRGDLVGVKIV------LKRMIGEGFYPNRERFGQI 218
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ C+ +A+++V M GI +V ++ L+ +S +A+ L K+ + G
Sbjct: 219 LRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGC 278
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
PN+ TYT L+ G +G + +A + + +G ++ ++MI Y + G F+EA
Sbjct: 279 SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARK 338
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ + +E +PD T+ I+ +L G+
Sbjct: 339 VFTSLEKRKLVPDQYTFASILSSLCLSGK 367
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 103/241 (42%), Gaps = 32/241 (13%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN----------- 62
N+++ + G +EA+ VF + K+ L P+ +++S++ CL + +
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGT 380
Query: 63 ---------------------KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
A + + M + D +YT+ ++ LC+ A
Sbjct: 381 DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIK 440
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
+ + +K D ++++ID L +L + A L P +V++Y + L
Sbjct: 441 MYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLV 500
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
++ ++ A +L ++E GI PN TY ++ GLCK + ++I ++ + +G L+
Sbjct: 501 RAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
Query: 222 T 222
T
Sbjct: 561 T 561
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ + + ALC+ G + A ++ +++K+ + +S+++D + + N A +F
Sbjct: 421 TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC 480
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ DV SYT+ I GL + K ++EA+SL +M I + Y ++I GLCK + +
Sbjct: 481 ILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKET 540
Query: 132 FDAWKLVNEMNHRGIP--PNV 150
K++ E G+ PN
Sbjct: 541 EKVRKILRECIQEGVELDPNT 561
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 2/180 (1%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D ++ T N+L K G A V ++M + + +Y+ + C A
Sbjct: 381 DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIK 440
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
++ +++ D ++ II+ L ++ + A L +K D + Y I GL
Sbjct: 441 MYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLV 500
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ--PN 184
+ +R +A+ L +M GI PN TY ++ LCK ++ ++++ ++G++ PN
Sbjct: 501 RAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPN 560
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+L EM+ RG+ N +TY L+ L ++ D A + K++ G+ P++ TY +L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 196 CKVGRLK---------DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
CK G+L+ D ++F + +KG NV TY+ MI G+CK+G +EA L KM
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ G +PD+ TY +IRA + G+ + +L++EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
L EM + ++ +T+ Y +LI GL + A ++ EM G+PP+++TYN LLD LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 162 KSHHVDRAIALIKKIEE----------QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
K+ +++A+ + K+E+ +G++PN+ TYT ++ G CK G ++A +F+ +
Sbjct: 63 KNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
G + TY+ +I + ++G + L+ +M S DA TYG++ L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F M QRG+ + +YT +I GL + D A + EM S + D + YN L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 126 CK---LERSF------DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
CK LE++ D W L ++ +G+ PNV+TY ++ CK + A L +K+
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+E G P+ TY L+ + G + E+ +++ + + TY ++ D +G
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Query: 237 DEALILM 243
D+ + M
Sbjct: 181 DKGFLEM 187
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 32 VFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC 91
+F M ++GL N V+Y++L+ G + + A++IF MV GV D+ +Y I+++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 92 K---------IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
K V++ W L + K + + + Y ++I G CK +A+ L +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
G P+ TYN L+ + + LIK++ + TY ++ D + GRL
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRL 180
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC---------LVKEVN 62
T+ L++ L + G+ A+ +F MV G+ P+I++Y+ L+DG C + +V
Sbjct: 18 TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVE 77
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
D+F + +GV +V +YT +I+G CK +EA++L +M + D+ YN+LI
Sbjct: 78 DGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVL 160
+ + +L+ EM + TY + D+L
Sbjct: 138 RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 175
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 15/145 (10%)
Query: 1 MVLQCIDAEVRTFNILVEALCKE---------GNVKEAKNVFAVMVKQGLEPNIVSYSSL 51
MV + ++ T+NIL++ LCK G V++ ++F + +G++PN+V+Y+++
Sbjct: 42 MVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 52 MDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS--LLNEMHSK 109
+ G+C +A +F M + G D +Y +I ++ D+A S L+ EM S
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR--AHLRDGDKAASAELIKEMRSC 159
Query: 110 KIIADTICYNSLIDGL--CKLERSF 132
+ D Y + D L +L++ F
Sbjct: 160 RFAGDASTYGLVTDMLHDGRLDKGF 184
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 140/277 (50%), Gaps = 9/277 (3%)
Query: 12 TFNILVEALC-KEG-NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
TF L+ LC K+G NV+EA F M++ G P+ + C V AK +
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-- 127
+ + G V +Y+I I LC+I ++EA S L ++ + D Y S++ GL +
Sbjct: 810 SLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 128 -LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
L+++ D VN M G P V Y L+ K +++ + +K+E + +P++
Sbjct: 869 DLQKALDK---VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVV 925
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TYT ++ G +G++++A F+++ +G + + +TYS I+ C+ ++AL L+S+M
Sbjct: 926 TYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM 985
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
G P + + + L ++G+++ A L++ A
Sbjct: 986 LDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSA 1022
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 70/348 (20%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D ++RT+ IL+ K + + VF M K G E + +Y+ ++ C+ + A +
Sbjct: 221 DKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALE 280
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVD----------------------------- 97
+ M+++G+T +++Y ++++ + K + VD
Sbjct: 281 FYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFC 340
Query: 98 ------EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR------- 144
EA L+ E+ +K++ D + L+ GLC+ R DA ++V+ M R
Sbjct: 341 VSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV 400
Query: 145 ---------------------------GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
G PP V TY ++ L K ++ L ++
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
E GI+P+ T ++ G R+ +A ++F + KG ++YS+ + C+ +D
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
E + + ++M +S + + +I ++ K GE EK L++E+ RS
Sbjct: 521 EIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQKRS 567
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +N ++ + N+ + + M K G + +I +++ L+ Y K++ K +F
Sbjct: 189 VGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFE 248
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G D +Y I+I LC D A EM K I Y L+D + K E
Sbjct: 249 KMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSE 308
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ + ++M + LL C S + A+ LI++++ + + + +
Sbjct: 309 KVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFE 368
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ GLC+ R+ DA EI DI+ + + Y ++I GY ++ +AL ++ S
Sbjct: 369 ILVKGLCRANRMVDALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G P TY I++ LFK + EK L EM+
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 34/215 (15%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEA-------KN--------VFAVMVKQGLEPN- 44
MV C +E F L+++ C G +KEA KN F ++VK N
Sbjct: 320 MVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANR 379
Query: 45 ------IVS------------YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
IV Y ++ GY +V+KA + F + + G V +YT I
Sbjct: 380 MVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEI 439
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
+ L K+K ++ +L NEM I D++ +++ G R +AWK+ + M +GI
Sbjct: 440 MQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
P +Y+ + LC+S D I + ++ I
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + L+ KE +++ M + EP++V+Y++++ GY + +V +A + F
Sbjct: 889 VHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFR 948
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
M +RG + D ++Y+ IN LC+ ++A LL+EM K I TI + ++ GL
Sbjct: 949 NMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 47/324 (14%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC---- 56
M+ I+ + +V + V EA VF+ M ++G++P SYS + C
Sbjct: 459 MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSR 518
Query: 57 ---LVKEVNK--------AKDIFNFMVQ--------------RGVTHDVQSYTIIINGLC 91
++K N+ DIF++++ + + SY +NG
Sbjct: 519 YDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSG 578
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSL-------IDGLCKLERSFDAWKLVNEMNHR 144
K + E L+++ + +++ + +L + +C++ S W E
Sbjct: 579 KAEFSQEE-ELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDW----ERTQE 633
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKI----EEQGIQPNMYTYTVLMDGLCKVGR 200
+ + + + P L V H + A+++ + G + N Y + +
Sbjct: 634 ALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKD 693
Query: 201 LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGI 260
K + +F ++ +G + T+++MI Y + GL + A+ +M+ G IP + T+
Sbjct: 694 FKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 261 IIRALF-KKGEN-EKAEKLLREMV 282
+I L KKG N E+A + REM+
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMI 777
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R F+ K + +HR V YN +L + ++ ++D L+ ++E+ G ++ T+T
Sbjct: 174 RFFNWVKQKDGFSHR-----VGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWT 228
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ K ++ +F+ + G+ L+ Y++MI C G D AL +M
Sbjct: 229 ILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEK 288
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G TY +++ + K + + + + +MV
Sbjct: 289 GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV 321
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE--PNIVSYSSLMDGYCLVKEVNK 63
+ + TFNI++ L K G +A ++F M ++ E P++V+++S+M Y + E+
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +F MV G+ ++ SY ++ M A S+L ++ II D + Y L++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
+ + A ++ M PNV+TYN L+D + + A+ + +++E+ GI+P
Sbjct: 267 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 326
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N+ + L+ + + + + +G NLN Y+ I Y ++A+ L
Sbjct: 327 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 386
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M D+VT+ I+I + + +A L+EM
Sbjct: 387 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 35/314 (11%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF ++ +G ++ + VF MV +GL+PNIVSY++LM Y + A +
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ Q G+ DV SYT ++N + + +A + M ++ + + YN+LID
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 129 ERSFDAWKLVNEMNHRGIPPNVIT-----------------------------------Y 153
+A ++ +M GI PNV++ Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 154 NPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
N + + +++AIAL + + ++ ++ + T+T+L+ G C++ + +A +++
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
L YS ++ Y K+G EA + ++M+ +GC PD + Y ++ A + K
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 274 AEKLLREMVARSLH 287
A +L EM A +
Sbjct: 487 ACELFLEMEANGIE 500
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I T+N L+ A GN +EA V M G+ P++V+++ ++ Y ++
Sbjct: 72 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI--IADTICY 118
+KA F M V D ++ III L K+ +A L N M K+ D + +
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 119 NSLIDGLCKLERSFDAWKLVNE-MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
S++ L ++ + + V E M G+ PN+++YN L+ A++++ I+
Sbjct: 192 TSIMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 250
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ GI P++ +YT L++ + + A+E+F + + NV TY+ +ID Y G
Sbjct: 251 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 310
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
EA+ + +ME G P+ V+ ++ A + + + +L +R ++
Sbjct: 311 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V ++ L+ + + +AK VF +M K+ +PN+V+Y++L+D Y + +A
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+IF M Q G+ +V S ++ + K ++L+ S+ I +T YNS I
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
A L M + + + +T+ L+ C+ AI+ +K++E+ I
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 433
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y+ ++ K G++ +A+ IF + + G +V Y+ M+ Y + +A L +
Sbjct: 434 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 493
Query: 246 MESSGCIPDAVTYGIIIRALFKKGE 270
ME++G PD++ ++RA K G+
Sbjct: 494 MEANGIEPDSIACSALMRAFNKGGQ 518
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N L++A G + EA +F M + G++PN+VS +L+ K+ + +
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
RG+ + +Y I +++A +L M KK+ AD++ + LI G C++
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A + EM IP Y+ +L K V A ++ +++ G +P++ YT
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
++ + A E+F ++ G + S ++ + K G +LM M
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLM 529
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%), Gaps = 1/275 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+ TF IL+ C+ EA + M + YSS++ Y +V +A+
Sbjct: 394 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
IFN M G DV +YT +++ + +A L EM + I D+I ++L+
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + + + L++ M + IP + + RAI LI+ ++ ++
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
++ K G+++ ++F I+ G +N++TY+++++ G + + + ++
Sbjct: 574 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 633
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
M +G P Y II + ++ + E L+R+
Sbjct: 634 MSGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQ 667
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/255 (17%), Positives = 114/255 (44%), Gaps = 37/255 (14%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V++A+ +F M + D ++Y +IN + A +L+++M I YN+
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI+ +A ++ +M G+ P+++T+N +L +A++ + ++
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 181 IQPNMYTYTVLMDGLCKVGR-------------------------------------LKD 203
++P+ T+ +++ L K+G+ +++
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 206
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIR 263
+ +F+ ++ +G N+ +Y+ ++ Y G+ AL ++ ++ +G IPD V+Y ++
Sbjct: 207 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 266
Query: 264 ALFKKGENEKAEKLL 278
+ + + KA+++
Sbjct: 267 SYGRSRQPGKAKEVF 281
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
YN ++ + + + VD+A L ++++ +P+ TY L++ + G+ + A + D+L
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 213 IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
+ TY+ +I+ G + EAL + KM +G PD VT+ I++ A +K G
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA-YKSG 129
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE--PNIVSYSSLMDGYCLVKEVNK 63
+ + TFNI++ L K G +A ++F M ++ E P++V+++S+M Y + E+
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIEN 338
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +F MV G+ ++ SY ++ M A S+L ++ II D + Y L++
Sbjct: 339 CRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLN 398
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
+ + A ++ M PNV+TYN L+D + + A+ + +++E+ GI+P
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKP 458
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N+ + L+ + + + + +G NLN Y+ I Y ++A+ L
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M D+VT+ I+I + + +A L+EM
Sbjct: 519 QSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 143/314 (45%), Gaps = 35/314 (11%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF ++ +G ++ + VF MV +GL+PNIVSY++LM Y + A +
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ Q G+ DV SYT ++N + + +A + M ++ + + YN+LID
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 129 ERSFDAWKLVNEMNHRGIPPNVIT-----------------------------------Y 153
+A ++ +M GI PNV++ Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 154 NPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
N + + +++AIAL + + ++ ++ + T+T+L+ G C++ + +A +++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
L YS ++ Y K+G EA + ++M+ +GC PD + Y ++ A + K
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 274 AEKLLREMVARSLH 287
A +L EM A +
Sbjct: 619 ACELFLEMEANGIE 632
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 139/290 (47%), Gaps = 4/290 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ I T+N L+ A GN +EA V M G+ P++V+++ ++ Y ++
Sbjct: 204 MLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQ 263
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI--IADTICY 118
+KA F M V D ++ III L K+ +A L N M K+ D + +
Sbjct: 264 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 119 NSLIDGLCKLERSFDAWKLVNE-MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
S++ L ++ + + V E M G+ PN+++YN L+ A++++ I+
Sbjct: 324 TSIMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIK 382
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+ GI P++ +YT L++ + + A+E+F + + NV TY+ +ID Y G
Sbjct: 383 QNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLA 442
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
EA+ + +ME G P+ V+ ++ A + + + +L +R ++
Sbjct: 443 EAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 492
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V ++ L+ + + +AK VF +M K+ +PN+V+Y++L+D Y + +A
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+IF M Q G+ +V S ++ + K ++L+ S+ I +T YNS I
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 505
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
A L M + + + +T+ L+ C+ AI+ +K++E+ I
Sbjct: 506 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTK 565
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y+ ++ K G++ +A+ IF + + G +V Y+ M+ Y + +A L +
Sbjct: 566 EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Query: 246 MESSGCIPDAVTYGIIIRALFKKGE 270
ME++G PD++ ++RA K G+
Sbjct: 626 MEANGIEPDSIACSALMRAFNKGGQ 650
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 107/238 (44%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+N L++A G + EA +F M + G++PN+VS +L+ K+ + +
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
RG+ + +Y I +++A +L M KK+ AD++ + LI G C++
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A + EM IP Y+ +L K V A ++ +++ G +P++ YT
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
++ + A E+F ++ G + S ++ + K G +LM M
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/309 (17%), Positives = 137/309 (44%), Gaps = 44/309 (14%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVS----YSSLMDGYCLVKEVNKAKD 66
+ F +L+ L + G ++ NVF M ++ N + Y+ ++ + V++A+
Sbjct: 108 KNFPVLIRELSRRGCIELCVNVFKWM---KIQKNYCARNDIYNMMIRLHARHNWVDQARG 164
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+F M + D ++Y +IN + A +L+++M I YN+LI+
Sbjct: 165 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 224
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+A ++ +M G+ P+++T+N +L +A++ + ++ ++P+
Sbjct: 225 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 284
Query: 187 TYTVLMDGLCKVGR-------------------------------------LKDAQEIFQ 209
T+ +++ L K+G+ +++ + +F+
Sbjct: 285 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
++ +G N+ +Y+ ++ Y G+ AL ++ ++ +G IPD V+Y ++ + +
Sbjct: 345 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 404
Query: 270 ENEKAEKLL 278
+ KA+++
Sbjct: 405 QPGKAKEVF 413
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 123/275 (44%), Gaps = 1/275 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+ TF IL+ C+ EA + M + YSS++ Y +V +A+
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
IFN M G DV +YT +++ + +A L EM + I D+I ++L+
Sbjct: 586 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K + + + L++ M + IP + + RAI LI+ ++ ++
Sbjct: 646 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 705
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
++ K G+++ ++F I+ G +N++TY+++++ G + + + ++
Sbjct: 706 GLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEW 765
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
M +G P Y II + ++ + E L+R+
Sbjct: 766 MSGAGIQPSNQMYRDII-SFGERSAGIEFEPLIRQ 799
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 39/310 (12%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVS----YSSLMDGYCLVKEVNKAKDI- 67
+N ++E +CKEG +E+ + M G+EP+ + Y L + V ++ K +
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 68 ----------FNFMVQR--------------------GVTHDVQSYTIIINGLCKIKMVD 97
F+V++ G + + T I+GL K + VD
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVD 596
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
L ++ + D I Y+ LI LCK R+ +A L NEM +G+ P V TYN ++
Sbjct: 597 RGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMI 656
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
D CK +DR ++ I ++ E P++ TYT L+ GLC GR +A IF+ +KG +
Sbjct: 657 DGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA--IFRWNEMKGKD 714
Query: 218 L--NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
N T+ +I G CK G EAL+ +ME PD+ Y ++ +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGF 774
Query: 276 KLLREMVARS 285
+ REMV +
Sbjct: 775 GIFREMVHKG 784
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 51/332 (15%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPN--------------------- 44
++A++ +++L+ LCK +++ A +++ + + G+ P+
Sbjct: 314 MNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRIT 373
Query: 45 ------------IVSYSSLMDGYC---LVKEV---------NKAKDIFNFMVQ------R 74
++ Y SL +G+ LV E N D + +V+ +
Sbjct: 374 EVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK 433
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
+ D S +I+IN L K VD A +LL+++ +I + YN++I+G+CK RS ++
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
KL+ EM G+ P+ T N + L + A+ L+KK+ G +P + T L+
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LC+ GR DA + D+ +G+ ++ + IDG K D L L + ++G PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ Y ++I+AL K +A+ L EMV++ L
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGL 645
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 124/276 (44%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ +I++ L K V A + +V+ GL P + Y+++++G C ++ + M
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
GV + I L + A LL +M L+ LC+ R+
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRA 560
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA K ++++ G +++ +D L K+ VDR + L + I G P++ Y VL
Sbjct: 561 VDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ LCK R +A +F +++ KG V TY+ MIDG+CKEG D L + +M
Sbjct: 621 IKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK 680
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
PD +TY +I L G +A EM + +
Sbjct: 681 NPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY 716
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
++ LV+ LC+ G +A + +G ++V+ ++ +DG + V++ ++F
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ G DV +Y ++I LCK EA L NEM SK + YNS+IDG CK
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ M P+VITY L+ LC S AI +++ + PN T+
Sbjct: 664 EIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFM 723
Query: 190 VLMDGLCKVGRLKDAQEIFQDI 211
L+ GLCK G +A F+++
Sbjct: 724 ALIQGLCKCGWSGEALVYFREM 745
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V +++L++ALCK EA +F MV +GL+P + +Y+S++DG+C E+++
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + DV +YT +I+GLC EA NEM K + I + +LI GLCK
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
S +A EM + + P+ Y L+ S +++ + +++ +G P
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 23/289 (7%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T +++ C G + A +VF ++ +G +S + L+ +C +V+KA ++ +
Sbjct: 216 TLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEML 274
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+R + + ++Y ++I+G K +D+A+ L +M + AD Y+ LI GLCK +
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI-ALIKKIEEQGIQPNMYTYTV 190
A L E+ GIPP+ LL + + R +I I+++ + M Y
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLLYKS 391
Query: 191 LMDGLCKVGRLKDAQEIFQDI--------------LIKGYNLNV----RTYSVMIDGYCK 232
L +G + + +A Q++ L+K +N + + S++I+ K
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
D A+ L+ + +G IP + Y II + K+G +E++ KLL EM
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 35/260 (13%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGL-EPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
F + L G V EA +VF + + GL PN +Y+ CL++ ++K+
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYN------CLLEAISKSNS---- 192
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+++V+ + L EM D ++ C +
Sbjct: 193 --------------------SSVELVE---ARLKEMRDCGFHFDKFTLTPVLQVYCNTGK 229
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
S A + NE+ RG I+ L+ CK VD+A LI+ +EE+ I+ N TY V
Sbjct: 230 SERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCV 288
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ G K R+ A ++F+ + G N ++ Y V+I G CK + AL L +++ SG
Sbjct: 289 LIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSG 348
Query: 251 CIPDAVTYGIIIRALFKKGE 270
PD G ++ + ++ E
Sbjct: 349 IPPDRGILGKLLCSFSEESE 368
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + V T+N +++ CKEG + + M + P++++Y+SL+ G C
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
++A +N M + + ++ +I GLCK EA EM K++ D+ Y S
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLS 759
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVD 167
L+ E + + EM H+G P + N +L V S V+
Sbjct: 760 LVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLAVNVTSKFVE 806
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 1/282 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKA 64
+D T ++E K G+V +A +F + K G + + Y+SL+ C VK + A
Sbjct: 142 LDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGA 201
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ M+++G+ D ++Y I++NG C + EA L+EM + + LI+G
Sbjct: 202 YALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEG 261
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L A ++V++M G P++ T+N L++ + KS V+ I + + G+ +
Sbjct: 262 LLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVD 321
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
+ TY L+ + K+G++ +A + + + G+ Y+ +I G C+ G+FD+A S
Sbjct: 322 IDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFS 381
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M+ P+ Y ++I + G+ A L EM L
Sbjct: 382 DMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 132/275 (48%), Gaps = 14/275 (5%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +N L+ ALC A + M+++GL+P+ +Y+ L++G+C ++ +A++ +
Sbjct: 182 VDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD 241
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-- 127
M +RG + ++I GL ++ A ++++M + D +N LI+ + K
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 128 -----LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+E + A KL G+ ++ TY L+ + K +D A L+ E G +
Sbjct: 302 EVEFCIEMYYTACKL-------GLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHK 354
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P Y ++ G+C+ G DA F D+ +K + N Y+++I + G F +A
Sbjct: 355 PFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANY 414
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
+ +M G +P + + ++ L G+++ A ++
Sbjct: 415 LVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
Query: 59 KEVNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH--SKKIIADT 115
+ N + FN+ T Y + L K + W +L +M S I +T
Sbjct: 89 RSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGET 148
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+C+ +I+ K A +L N + G V YN LL LC A ALI+
Sbjct: 149 LCF--IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIR 206
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
++ +G++P+ TY +L++G C G++K+AQE ++ +G+N R ++I+G G
Sbjct: 207 RMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAG 266
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENE 272
+ A ++SKM G +PD T+ I+I A+ K GE E
Sbjct: 267 YLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + + RT+ ILV C G +KEA+ M ++G P L++G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK++ + M + G D+Q++ I+I + K V+ + + D Y +
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKT 327
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI + K+ + +A++L+N G P Y P++ +C++ D A + ++ +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
PN YT+L+ + G+ DA ++ G R + ++ DG G D A+
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAM 447
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + + R ++L+E L G ++ AK + + M K G P+I +++ L++ E
Sbjct: 243 MSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE 302
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +++ + G+ D+ +Y +I + KI +DEA+ LLN Y
Sbjct: 303 VEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAP 362
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I G+C+ DA+ ++M + PPN Y L+ + + A + ++ E G
Sbjct: 363 IIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMG 422
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQ-DILIKG 215
+ P + ++ DGL G+ A I Q ++ ++G
Sbjct: 423 LVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRG 458
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F +L+ A K GN A+ V +V+ K G PN++SY++LM+ Y + N A+ IF M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 73 QRGVTHDVQSYTIIINGLC---KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
G +Y II+ K K +E + L + + D Y+ +I K
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A K+ + M +G+P + +TYN L+ V + + +++ IQP++ +Y
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYA 325
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ + R ++A +F+++L G + Y++++D + G+ ++A + M
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD +Y ++ A + E AEK + +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ +++++ K GN ++A+ VF+ MV +G+ + V+Y+SLM KEV+K I++
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQ 311
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + + DV SY ++I + + +EA S+ EM + YN L+D
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A + M I P++ +Y +L + ++ A K+I+ G +PN+ TY
Sbjct: 372 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID--GYCKEGLFDEALILMSKMES 248
L+ G K ++ E+++ + + G N + ++D G CK F AL +MES
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMES 489
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKL 277
G PD +++ + E E+A++L
Sbjct: 490 CGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ L+E+ + G A+ +F M G EP+ ++Y ++ + + +A+++F +
Sbjct: 183 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 72 V---QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ + + D + Y ++I K ++A + + M K + T+ YNSL+
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS----F 298
Query: 129 ERSF-DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
E S+ + K+ ++M I P+V++Y L+ ++ + A+++ +++ + G++P
Sbjct: 299 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +L+D G ++ A+ +F+ + ++ +Y+ M+ Y + A +++
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P+ VTYG +I+ K + EK ++ +M
Sbjct: 419 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V ++ +L++A + +EA +VF M+ G+ P +Y+ L+D + + V +AK
Sbjct: 317 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + + D+ SYT +++ ++ A + + + Y +LI G
Sbjct: 377 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 436
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K ++ +M GI N ++D + + A+ K++E G+ P+
Sbjct: 437 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 496
Query: 186 YTYTVLMDGLCKVGRLKDAQEI 207
VL+ L++A+E+
Sbjct: 497 KAKNVLLSLASTQDELEEAKEL 518
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 41/238 (17%)
Query: 85 IIINGLCKIKMVDEAWSLLNEM-----HSKKIIADTICYNSLIDGLCKLERSFDAWKLVN 139
+++ L + K + + W+L++E+ + I + LI KL A ++++
Sbjct: 112 LVLGTLVRFKQLKK-WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 170
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
++ G PNVI+Y L++ + + A A+ ++++ G +P+ TY +++ +
Sbjct: 171 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 200 RLKDAQEIFQDILIKGYNL---NVRTYSVMIDGYCKEGLFDEALILMS------------ 244
+ K+A+E+F+ +L + + + + Y +MI Y K G +++A + S
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 245 --------------------KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+M+ S PD V+Y ++I+A + E+A + EM+
Sbjct: 291 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 164 HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
+ +R ++++ K+ G PN+ +YT LM+ + G+ +A+ IF+ + G + TY
Sbjct: 163 NGAERVLSVLSKM---GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 219
Query: 224 SVMIDGYCKEGLFDEALILMSKM---ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+++ + + F EA + + + S PD Y ++I K G EKA K+
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 281 MVARSL 286
MV + +
Sbjct: 280 MVGKGV 285
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+T I++ C +V +A N F + LE I + SL+ C K V+ A + F
Sbjct: 198 QTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-F 256
Query: 71 MVQRGVTHDVQSYTIIINGLCK-IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ D +S+ I++NG C I EA + EM + + D + Y+S+I K
Sbjct: 257 CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGG 316
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTY 188
KL + M I P+ YN ++ L K+ V A L+K +EE+ GI+PN+ TY
Sbjct: 317 SLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTY 376
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ LCK + ++A+++F ++L KG +RTY + + G +E L++KM
Sbjct: 377 NSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTG--EEVFELLAKMRK 433
Query: 249 SGCIPDAVTYGIIIRAL 265
GC P TY ++IR L
Sbjct: 434 MGCEPTVETYIMLIRKL 450
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 130/248 (52%), Gaps = 5/248 (2%)
Query: 9 EVRTFNILVEALCKE-GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ ++FNI++ C G+ +EA+ V+ M G++ ++VSYSS++ Y +NK +
Sbjct: 265 DAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKL 324
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK-IIADTICYNSLIDGLC 126
F+ M + + D + Y +++ L K V EA +L+ M +K I + + YNSLI LC
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K ++ +A ++ +EM +G+ P + TY+ + +L V L+ K+ + G +P +
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVE 441
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY +L+ LC+ + ++ ++ K ++ +Y VMI G G +EA +M
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Query: 247 ESSGCIPD 254
+ G P+
Sbjct: 502 KDKGMRPN 509
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 13 FNILVEALCKEGNVKEAKN-VFAVMVKQGLEPNIVSYSSLMDGYC-LVKEVNKAKDIFNF 70
F L+ ALC+ NV +A + +F K + S++ +++G+C ++ +A+ ++
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAK--SFNIVLNGWCNVIGSPREAERVWME 292
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M GV HDV SY+ +I+ K +++ L + M + I D YN+++ L K
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 131 SFDAWKLVNEMNH-RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A L+ M +GI PNV+TYN L+ LCK+ + A + ++ E+G+ P + TY
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIK----GYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
M L+ +E+F+ +L K G V TY ++I C+ FD L+L +
Sbjct: 413 AFMR------ILRTGEEVFE-LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 465
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
M+ PD +Y ++I LF G+ E+A +EM + +
Sbjct: 466 MKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVK 59
M +CI+ + + +N +V AL K V EA+N+ M ++ G+EPN+V+Y+SL+ C +
Sbjct: 328 MKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKAR 387
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ +AK +F+ M+++G+ +++Y + L + +E + LL +M Y
Sbjct: 388 KTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYI 444
Query: 120 SLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
LI LC+ R FD L +EM + + P++ +Y ++ L + ++ A K++++
Sbjct: 445 MLIRKLCRW-RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKD 503
Query: 179 QGIQPN 184
+G++PN
Sbjct: 504 KGMRPN 509
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 11/228 (4%)
Query: 62 NKAKDIFNFMV----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
N + F F V Q+G V+ Y +I+ L K++ D AW+L++EM +K +
Sbjct: 139 NDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVN 196
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMN---HRGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+L+ + K D K +N + + + + LL LC+ +V A LI
Sbjct: 197 SQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF 256
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKV-GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
+ + ++ ++++G C V G ++A+ ++ ++ G +V +YS MI Y K
Sbjct: 257 -CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKG 315
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G ++ L L +M+ PD Y ++ AL K +A L++ M
Sbjct: 316 GSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 43/282 (15%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLM---DGYCLVKEVNKAKD 66
VR ++ ++ L K A + M K P++V+ +L+ YC V +V KA +
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
F+ + + + + +++ LC+ K V +A L+ + K D +N +++G C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNKDKYPFDAKSFNIVLNGWC 277
Query: 127 KLERS-FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ S +A ++ EM + G+ +V++Y+ ++ K +++ + L +++++ I+P+
Sbjct: 278 NVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDR 337
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y ++ L K EA LM
Sbjct: 338 KVYNAVVHALAKAS-----------------------------------FVSEARNLMKT 362
Query: 246 MESS-GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
ME G P+ VTY +I+ L K + E+A+++ EM+ + L
Sbjct: 363 MEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGL 404
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 128/272 (47%), Gaps = 6/272 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F +L+ A K GN A+ V +V+ K G PN++SY++LM+ Y + N A+ IF M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 73 QRGVTHDVQSYTIIINGLC---KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
G +Y II+ K K +E + L + + D Y+ +I K
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A K+ + M +G+P + +TYN L+ V + + +++ IQP++ +Y
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYA 318
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
+L+ + R ++A +F+++L G + Y++++D + G+ ++A + M
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD +Y ++ A + E AEK + +
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 7/269 (2%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ +++++ K GN ++A+ VF+ MV +G+ + V+Y+SLM KEV+K I++
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQ 304
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + + DV SY ++I + + +EA S+ EM + YN L+D
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A + M I P++ +Y +L + ++ A K+I+ G +PN+ TY
Sbjct: 365 VEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID--GYCKEGLFDEALILMSKMES 248
L+ G K ++ E+++ + + G N + ++D G CK F AL +MES
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMES 482
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKL 277
G PD +++ + E E+A++L
Sbjct: 483 CGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ L+E+ + G A+ +F M G EP+ ++Y ++ + + +A+++F +
Sbjct: 176 SYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 72 V---QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ + + D + Y ++I K ++A + + M K + T+ YNSL+
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS----F 291
Query: 129 ERSF-DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
E S+ + K+ ++M I P+V++Y L+ ++ + A+++ +++ + G++P
Sbjct: 292 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +L+D G ++ A+ +F+ + ++ +Y+ M+ Y + A +++
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G P+ VTYG +I+ K + EK ++ +M
Sbjct: 412 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V ++ +L++A + +EA +VF M+ G+ P +Y+ L+D + + V +AK
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + + D+ SYT +++ ++ A + + + Y +LI G
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
K ++ +M GI N ++D + + A+ K++E G+ P+
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 489
Query: 186 YTYTVLMDGLCKVGRLKDAQEI 207
VL+ L++A+E+
Sbjct: 490 KAKNVLLSLASTQDELEEAKEL 511
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 41/238 (17%)
Query: 85 IIINGLCKIKMVDEAWSLLNEM-----HSKKIIADTICYNSLIDGLCKLERSFDAWKLVN 139
+++ L + K + + W+L++E+ + I + LI KL A ++++
Sbjct: 105 LVLGTLVRFKQLKK-WNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLS 163
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
++ G PNVI+Y L++ + + A A+ ++++ G +P+ TY +++ +
Sbjct: 164 VLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 200 RLKDAQEIFQDILIKGYNL---NVRTYSVMIDGYCKEGLFDEALILMS------------ 244
+ K+A+E+F+ +L + + + + Y +MI Y K G +++A + S
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 245 --------------------KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+M+ S PD V+Y ++I+A + E+A + EM+
Sbjct: 284 TYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEML 341
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 164 HHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
+ +R ++++ K+ G PN+ +YT LM+ + G+ +A+ IF+ + G + TY
Sbjct: 156 NGAERVLSVLSKM---GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 224 SVMIDGYCKEGLFDEALILMSKM---ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+++ + + F EA + + + S PD Y ++I K G EKA K+
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 281 MVARSL 286
MV + +
Sbjct: 273 MVGKGV 278
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 12/290 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+++ + N+L++ LC+ A VF M QG P+ SY LM G+CL ++ +A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 66 ----DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+F + Q+G D+ Y I+++ LC VD+A +L ++ K + A CY+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 122 IDGLCKLERSFDAW----KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
G E S + +L+ E RG P + +Y+ + L + + ++ +
Sbjct: 268 EAG--HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL-NVRTYSVMIDGYCKEGLF 236
+G +P + Y + LC+ G+LK+A + +++G+ L V Y+V+I G C +G
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS 385
Query: 237 DEALILMSKMESS-GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
EA+ + KM C+ + TY ++ L + G+ +A +++ EM+ +S
Sbjct: 386 MEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGY--CLVKEVNKAKD 66
++ + IL++ALC G V +A + ++++GL+ Y + G+ + + + K
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + RG + SY+ + L + + E +L M SK Y + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 127 KLERSFDAWKLVN-EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPN 184
+ + +A ++N EM P V YN L+ LC A+ +KK+ +Q N
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY L+DGLC+ G+ +A ++ +++LIK + V TY +MI G C EA++ +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 245 KMESSGCIPDAVTY 258
+M S +P++ +
Sbjct: 465 EMVSQDMVPESSVW 478
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+ C+D +++ + L +EG + E + V M +G EP Y + + C ++
Sbjct: 294 AIPCLD----SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKL 349
Query: 62 NKAKDIFNF-MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI--IADTICY 118
+A + N M+Q V Y ++I GLC EA L +M SK++ +A+ Y
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSCVANEETY 408
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+L+DGLC+ + +A +++ EM + P V TY+ ++ LC A+ ++++
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 179 QGIQPNMYTYTVLMDGLC 196
Q + P + L + +C
Sbjct: 469 QDMVPESSVWKALAESVC 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---LERS---FDAWK 136
+ +I + +++A SL +H + ++ +++L+ + K LE + F +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
E+N R + N L+ VLC+ + D A + +++ QG P+ +Y +LM G C
Sbjct: 144 YGWEVNSR-----ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFC 198
Query: 197 KVGRLKDAQEI----FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G+L++A + F I KG ++ Y +++D C G D+A+ ++ K+ G
Sbjct: 199 LEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Query: 253 PDAVTYGIIIRALFKKGEN--EKAEKLLREMVAR 284
Y I ++ E+ ++LL E + R
Sbjct: 259 APKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 144/290 (49%), Gaps = 12/290 (4%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+++ + N+L++ LC+ A VF M QG P+ SY LM G+CL ++ +A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 66 ----DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+F + Q+G D+ Y I+++ LC VD+A +L ++ K + A CY+ +
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 122 IDGLCKLERSFDAW----KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
G E S + +L+ E RG P + +Y+ + L + + ++ +
Sbjct: 268 EAG--HWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL-NVRTYSVMIDGYCKEGLF 236
+G +P + Y + LC+ G+LK+A + +++G+ L V Y+V+I G C +G
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS 385
Query: 237 DEALILMSKMESS-GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
EA+ + KM C+ + TY ++ L + G+ +A +++ EM+ +S
Sbjct: 386 MEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKS 435
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGY--CLVKEVNKAKD 66
++ + IL++ALC G V +A + ++++GL+ Y + G+ + + + K
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + RG + SY+ + L + + E +L M SK Y + + LC
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 127 KLERSFDAWKLVN-EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPN 184
+ + +A ++N EM P V YN L+ LC A+ +KK+ +Q N
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY L+DGLC+ G+ +A ++ +++LIK + V TY +MI G C EA++ +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLE 464
Query: 245 KMESSGCIPDAVTY 258
+M S +P++ +
Sbjct: 465 EMVSQDMVPESSVW 478
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 8/198 (4%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+ C+D +++ + L +EG + E + V M +G EP Y + + C ++
Sbjct: 294 AIPCLD----SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKL 349
Query: 62 NKAKDIFNF-MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI--IADTICY 118
+A + N M+Q V Y ++I GLC EA L +M SK++ +A+ Y
Sbjct: 350 KEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM-SKQVSCVANEETY 408
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
+L+DGLC+ + +A +++ EM + P V TY+ ++ LC A+ ++++
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 179 QGIQPNMYTYTVLMDGLC 196
Q + P + L + +C
Sbjct: 469 QDMVPESSVWKALAESVC 486
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---LERS---FDAWK 136
+ +I + +++A SL +H + ++ +++L+ + K LE + F +
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
E+N R + N L+ VLC+ + D A + +++ QG P+ +Y +LM G C
Sbjct: 144 YGWEVNSR-----ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFC 198
Query: 197 KVGRLKDAQEI----FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G+L++A + F I KG ++ Y +++D C G D+A+ ++ K+ G
Sbjct: 199 LEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLK 258
Query: 253 PDAVTYGIIIRALFKKGEN--EKAEKLLREMVAR 284
Y I ++ E+ ++LL E + R
Sbjct: 259 APKRCYHHIEAGHWESSSEGIERVKRLLTETLIR 292
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 131/266 (49%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+ C+ N+ EA ++ M+ GL+P+IV+++ +++G + + A +F+ M
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G +V+SYTI+I CK ++ A ++M + D Y LI G ++
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++L+ EM +G PP+ TYN L+ ++ + + K+ + I+P+++T+ ++
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M + + ++ +++ KG + +Y+V+I G EG EA + +M G
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKL 277
+ Y + G+ E E+L
Sbjct: 540 KTPLIDYNKFAADFHRGGQPEIFEEL 565
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 138/277 (49%), Gaps = 1/277 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T N L+++L + KEA+ +F + K+ PN+++Y+ L++G+C V+ + +A I+N
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ G+ D+ ++ +++ GL + +A L + M SK + Y +I CK
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A + ++M G+ P+ Y L+ +D L+K+++E+G P+ TY
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ + + I+ ++ ++ T+++++ Y ++ + +M
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PD +Y ++IR L +G++ +A + L EM+ + +
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ N+++E L + +A +F VM +G PN+ SY+ ++ +C
Sbjct: 324 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 383
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + F+ MV G+ D YT +I G K +D + LL EM K D YN+
Sbjct: 384 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 443
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI + + ++ N+M I P++ T+N ++ + + + A+ ++ ++G
Sbjct: 444 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 503
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG---LFD 237
I P+ +YTVL+ GL G+ ++A +++L KG + Y+ + + G +F+
Sbjct: 504 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFE 563
Query: 238 E 238
E
Sbjct: 564 E 564
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
+QG +Y+S+M ++ + M +G+ ++++TI + K
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
+A + M K N L+D L + + +A L +++ R PN++TY LL
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ C+ ++ A + + + G++P++ + V+++GL + + DA ++F + KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
NVR+Y++MI +CK+ + A+ M SG PDA Y +I + + + +L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 278 LREM 281
L+EM
Sbjct: 426 LKEM 429
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR++ I++ CK+ +++ A F MV GL+P+ Y+ L+ G+ K+++ ++
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++G D ++Y +I + KM + + N+M +I +N ++ +
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF-VA 486
Query: 130 RSFDAWKLV-NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R+++ + V +EM +GI P+ +Y L+ L A ++++ ++G++ + Y
Sbjct: 487 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDY 546
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG 215
+ G+ + +E+ Q G
Sbjct: 547 NKFAADFHRGGQPEIFEELAQRAKFSG 573
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 131/266 (49%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+ C+ N+ EA ++ M+ GL+P+IV+++ +++G + + A +F+ M
Sbjct: 299 TYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G +V+SYTI+I CK ++ A ++M + D Y LI G ++
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++L+ EM +G PP+ TYN L+ ++ + + K+ + I+P+++T+ ++
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
M + + ++ +++ KG + +Y+V+I G EG EA + +M G
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKL 277
+ Y + G+ E E+L
Sbjct: 539 KTPLIDYNKFAADFHRGGQPEIFEEL 564
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 138/277 (49%), Gaps = 1/277 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T N L+++L + KEA+ +F + K+ PN+++Y+ L++G+C V+ + +A I+N
Sbjct: 263 VETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M+ G+ D+ ++ +++ GL + +A L + M SK + Y +I CK
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A + ++M G+ P+ Y L+ +D L+K+++E+G P+ TY
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ + + I+ ++ ++ T+++++ Y ++ + +M
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G PD +Y ++IR L +G++ +A + L EM+ + +
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 118/241 (48%), Gaps = 3/241 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + ++ N+++E L + +A +F VM +G PN+ SY+ ++ +C
Sbjct: 323 MIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSS 382
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A + F+ MV G+ D YT +I G K +D + LL EM K D YN+
Sbjct: 383 METAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNA 442
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI + + ++ N+M I P++ T+N ++ + + + A+ ++ ++G
Sbjct: 443 LIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKG 502
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG---LFD 237
I P+ +YTVL+ GL G+ ++A +++L KG + Y+ + + G +F+
Sbjct: 503 ICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFE 562
Query: 238 E 238
E
Sbjct: 563 E 563
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 118/244 (48%), Gaps = 2/244 (0%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
+QG + +Y+S+M ++ + M +G+ ++++TI + K
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
+A + M K N L+D L + + +A L +++ R PN++TY LL
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 304
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
+ C+ ++ A + + + G++P++ + V+++GL + + DA ++F + KG
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
NVR+Y++MI +CK+ + A+ M SG PDA Y +I + + + +L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 278 LREM 281
L+EM
Sbjct: 425 LKEM 428
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR++ I++ CK+ +++ A F MV GL+P+ Y+ L+ G+ K+++ ++
Sbjct: 367 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 426
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M ++G D ++Y +I + KM + + N+M +I +N ++ +
Sbjct: 427 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF-VA 485
Query: 130 RSFDAWKLV-NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R+++ + V +EM +GI P+ +Y L+ L A ++++ ++G++ + Y
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDY 545
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG 215
+ G+ + +E+ Q G
Sbjct: 546 NKFAADFHRGGQPEIFEELAQRAKFSG 572
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 6/241 (2%)
Query: 47 SYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTH------DVQSYTIIINGLCKIKMVDEAW 100
SY+ + G+ +++ A +F M +R + D+ +Y +I+ LC +A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 101 SLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVL 160
+ +E+ D Y LI G CK R DA ++ EM + G P+ I YN LLD
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 161 CKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
K+ V A L +K+ ++G++ + +TY +L+DGL + GR + +F D+ KG ++
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDA 429
Query: 221 RTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
T+S++ C+EG + A+ L+ +ME+ G D VT ++ K+G + EKL++
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 281 M 281
+
Sbjct: 490 I 490
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 139/270 (51%), Gaps = 6/270 (2%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQG------LEPNIVSYSSLMDGYCLVKEVN 62
+ ++NI + G++ A ++F M ++ P+I +Y+SL+ CL +
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
A +++ + G D +Y I+I G CK +D+A + EM + DTI YN L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
DG K + +A +L +M G+ + TYN L+D L ++ + L ++++G
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
+ T++++ LC+ G+L+ A ++ +++ +G+++++ T S ++ G+ K+G +D L
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENE 272
M + +P+ + + + A K+ +++
Sbjct: 487 MKHIREGNLVPNVLRWNAGVEASLKRPQSK 516
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII------ADTICYNSLIDGLCKLERSF 132
D SY I I+G +D A SL EM + + D YNSLI LC ++
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
DA + +E+ G P+ TY L+ CKS+ +D A+ + +++ G P+ Y L+
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DG K ++ +A ++F+ ++ +G + TY+++IDG + G + L ++ G
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
DA+T+ I+ L ++G+ E A KL+ EM R
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGF 460
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ IL++ CK + +A ++ M G P+ + Y+ L+DG ++V +A +F M
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
VQ GV +Y I+I+GL + + ++L ++ K D I ++ + LC+ +
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A KLV EM RG +++T + LL K D L+K I E + PN+ +
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAG 505
Query: 192 MDGLCKVGRLKD 203
++ K + KD
Sbjct: 506 VEASLKRPQSKD 517
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGL-EPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V N + +G++ A +F + G+ + +Y+S+M + A+ +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ M + D+ +Y +II GL K+ D A ++L+ + + D + YN+LI+ L K
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A +L + M GI P+V++YN +++V K+ + A +K + + G PN T
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 188 YTVL 191
T+L
Sbjct: 773 DTIL 776
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 125/324 (38%), Gaps = 57/324 (17%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ + +C+ G + E ++ M + G+ + L+D + A + ++M
Sbjct: 94 AYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYM 153
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL------NEMHSK---------KIIADTI 116
+ G + Y ++ L K + A S+L ++ HS + T+
Sbjct: 154 EELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTV 213
Query: 117 CYNSLIDGLCKLE-RS----------------FDAW-------------------KLVNE 140
N L+ GL + + RS FD W L E
Sbjct: 214 AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKE 273
Query: 141 MNHR------GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
M R P++ TYN L+ VLC A+ + +++ G +P+ TY +L+ G
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQG 333
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
CK R+ DA I+ ++ G+ + Y+ ++DG K EA L KM G
Sbjct: 334 CCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRAS 393
Query: 255 AVTYGIIIRALFKKGENEKAEKLL 278
TY I+I LF+ G E L
Sbjct: 394 CWTYNILIDGLFRNGRAEAGFTLF 417
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 41 LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI-IINGLCKIKMVDEA 99
+E + S S MD L + N+ K +F + V S+ + ++N I +
Sbjct: 552 MEDDPWSSSPYMDQ--LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGD 609
Query: 100 WSL---LNEMHSKKIIAD--TICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
SL L E+ + + D + YNS++ K A ++++M ++ TYN
Sbjct: 610 LSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYN 669
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
++ L K D A A++ ++ +QG ++ Y L++ L K RL +A ++F +
Sbjct: 670 VIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSN 729
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
G N +V +Y+ MI+ K G EA + M +GC+P+ VT I+
Sbjct: 730 GINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 134/343 (39%), Gaps = 69/343 (20%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGY-------- 55
Q +DA TF+I+ LC+EG ++ A + M +G ++V+ SSL+ G+
Sbjct: 425 QFVDA--ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDW 482
Query: 56 --------------------------CLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIING 89
L + +K KD +G D+ S +
Sbjct: 483 KEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDD 542
Query: 90 LCKIK----MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER------SFD------ 133
+ M D+ WS M +A + GL + +R SFD
Sbjct: 543 GASAEEVSPMEDDPWSSSPYMDQ---LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNT 599
Query: 134 -------------AWKLVNEMNHRGIPP-NVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
A KL N G+ TYN ++ K + A ++ ++ E
Sbjct: 600 FLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN 659
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
++ TY V++ GL K+GR A + + +G L++ Y+ +I+ K DEA
Sbjct: 660 FCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEA 719
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
L M+S+G PD V+Y +I K G+ ++A K L+ M+
Sbjct: 720 TQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAML 762
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 24/230 (10%)
Query: 60 EVNKAKDIFN--FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
+ +K D F + ++ G H +Y+ I +C+ ++ E LL M + D
Sbjct: 70 DPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTM 129
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
L+D L + + A +++ M G N Y+ +L L K H + A++++ K+
Sbjct: 130 AKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLL 189
Query: 178 EQGIQ---------------PNMYTYTVLMDGLCKVGRLKDAQEIFQDIL-IKGYNLNVR 221
E P L+ GL + + + +F+ + +K + +
Sbjct: 190 EASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 222 TYSVMIDGYCKEGLFDEALILMSKMESSGCI------PDAVTYGIIIRAL 265
+Y++ I G+ G D AL L +M+ + PD TY +I L
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVL 299
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 6/268 (2%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
++++ + +A F +M K P ++ L+ C + KA++ F ++
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEE-FMLASKK 252
Query: 75 GVTHDVQSYTIIINGLCKIKM-VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
DV+ + +I+NG C I V EA + EM + I + Y+ +I K+ FD
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
+ +L +EM RG+ P + YN L+ VL + D A+ L+KK+ E+G++P+ TY ++
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
LC+ G+L A+ + ++ + + V T+ ++ F++ L ++ +M+ S P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDLGP 428
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREM 281
T+ +I+ LFK + E A K+ EM
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 37/237 (15%)
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
+MD Y + ++A F+ M + T +++ ++ LC+ +++A + + SKK
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 111 IIA-DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRA 169
+ D +N +++G C + W V E A
Sbjct: 253 LFPVDVEGFNVILNGWCNI------WTDVTE----------------------------A 278
Query: 170 IALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
+ +++ I PN +Y+ ++ KVG L D+ ++ ++ +G + Y+ ++
Sbjct: 279 KRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYV 338
Query: 230 YCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+E FDEA+ LM K+ G PD+VTY +IR L + G+ + A +L M++ +L
Sbjct: 339 LTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 105/240 (43%), Gaps = 32/240 (13%)
Query: 9 EVRTFNILVEALCK-EGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V FN+++ C +V EAK ++ M + PN SYS ++ + V + + +
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
++ M +RG+ ++ Y ++ L + DEA L+ +++ + + D++ YNS+I LC+
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCE 376
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDV---------------------------- 159
+ A ++ M + P V T++ L+
Sbjct: 377 AGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLI 436
Query: 160 ---LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
L K + A+ + +++ I N Y + GL G L+ A+EI+ ++ KG+
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N ++ LC+ G + A+NV A M+ + L P + ++ + ++ K + ++ M
Sbjct: 366 TYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTL----EVLGQM 421
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ +++ +I+ L K K + A + EM +I+A+ Y + I GL
Sbjct: 422 KISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWL 481
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
A ++ +EM +G NP+L L + V
Sbjct: 482 EKAREIYSEMKSKG-----FVGNPMLQKLLEEQKV 511
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 154/303 (50%), Gaps = 28/303 (9%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +RTFN+LV+A CK+ V+EA V M + G+ P+ V+Y+++ Y E +A+
Sbjct: 184 VGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAE 243
Query: 66 D--IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +++ + ++ I++ G C+ V + + M ++ A+ + +NSLI+
Sbjct: 244 SEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 124 GLCK-LER-------------SFDAW-----------KLVNEMNHRGIPPNVITYNPLLD 158
G + ++R SF+ +++ M + +VITY+ +++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
+ ++++A + K++ + G++P+ + Y++L G + K A+E+ + ++++
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RP 422
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
NV ++ +I G+C G D+A+ + +KM G P+ T+ ++ + + KAE++L
Sbjct: 423 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 482
Query: 279 REM 281
+ M
Sbjct: 483 QMM 485
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 122/243 (50%), Gaps = 5/243 (2%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VR+ L+ L + G EA+ VF + + G P+++SY++L+ + K+ I +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG---LC 126
+ Q G D + +IN + +++A L +M + T YN+LI G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K ERS + L+ E + + PN+ T+N L+ CK V+ A ++KK+EE G++P+
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 187 TYTVLMDGLCKVGRLKDAQ-EIFQDILIK-GYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
TY + + G A+ E+ + +++K N RT +++ GYC+EG + L +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 245 KME 247
+M+
Sbjct: 285 RMK 287
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
V+S T ++N L + EA ++ + I Y +L+ + ++ +
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
V+E+ G + I +N +++ +S +++ A+ + K++E G+ P TY L+ G
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 198 VGRLKDAQEIFQDILIKGYNL----NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
G+ + + E+ D++++ N+ N+RT++V++ +CK+ +EA ++ KME G P
Sbjct: 163 AGKPERSSELL-DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 254 DAVTYGIIIRALFKKGENEKAE 275
D VTY I +KGE +AE
Sbjct: 222 DTVTYNTIATCYVQKGETVRAE 243
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+FN VE + GN K V +M + ++ ++++YS++M+ + + KA +F M
Sbjct: 325 SFNEEVELV---GNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 381
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM--HSKKIIADTICYNSLIDGLCKLE 129
V+ GV D +Y+I+ G + K +A LL + S+ + + + ++I G C
Sbjct: 382 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR---PNVVIFTTVISGWCSNG 438
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
DA ++ N+M G+ PN+ T+ L+ + +A +++ + G++P T+
Sbjct: 439 SMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFL 498
Query: 190 VLMDGLCKVGRLKD 203
+L + +V L D
Sbjct: 499 LLAEAW-RVAGLTD 511
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ A+V T++ ++ A G +++A VF MVK G++P+ +YS L GY KE KA+
Sbjct: 351 VKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE 410
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ ++ +V +T +I+G C +D+A + N+M + + + +L+ G
Sbjct: 411 ELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITY 153
++++ + A +++ M G+ P T+
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F ++ C G++ +A VF M K G+ PNI ++ +LM GY VK+ KA+++ M
Sbjct: 427 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMR 486
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI 111
GV + ++ ++ + DE+ +N + K I
Sbjct: 487 GCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 525
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
I V L +E A + + Q ++ +Y++++ Y + KA D+F M +
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAW----SLLNEMHSKKIIADTICYNSLIDGLCKLER 130
G + + +Y +I++ K+ +W +L+EM SK + D ++++ +
Sbjct: 240 GPSPTLVTYNVILDVFGKM---GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A + E+ G P +TYN LL V K+ A++++K++EE + TY
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ + G K+A + + + KG N TY+ +ID Y K G DEAL L M+ +G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
C+P+ TY ++ L KK + + K+L +M
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC-LVKEVNKAKDI 67
+VR + ++ A + G ++A ++F M + G P +V+Y+ ++D + + + K +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ M +G+ D + + +++ + ++ EA E+ S T+ YN+L+ K
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+A ++ EM P + +TYN L+ ++ A +I+ + ++G+ PN T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
YT ++D K G+ +A ++F + G N TY+ ++ K+ +E + ++ M+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
S+GC P+ T+ ++ KG ++ ++ REM
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM 482
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T + ++ A +EG ++EAK FA + G EP V+Y++L+ + +A + M
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ D +Y ++ + EA ++ M K ++ + I Y ++ID K +
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A KL M G PN TYN +L +L K + I ++ ++ G PN T+ +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ G K +F+++ G+ + T++ +I Y + G +A + +M +G
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
TY ++ AL +KG+ E ++ +M ++
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 137/301 (45%), Gaps = 40/301 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M +A V T+N L+ AL ++G+ + +NV + M +G +P SYS ++ C K
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ--CYAKG 574
Query: 61 VN-----------KAKDIF------------NFMV------QRGVT----HDVQSYTIII 87
N K IF NF +R T H + +I
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 88 NGLCKI----KMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
N + I M D+A +L + + D + YNSL+D + + A +++ +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
+ P++++YN ++ C+ + A+ ++ ++ E+GI+P ++TY + G +G +
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES-SGCIPDAVTYGIII 262
+++ + + N T+ +++DGYC+ G + EA+ +SK+++ C D + +
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLAL 814
Query: 263 R 263
R
Sbjct: 815 R 815
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 144/344 (41%), Gaps = 70/344 (20%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A+ T+N LV A + G KEA V +M K+G+ PN ++Y++++D Y + ++A +
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCK-------IKMV-----------DEAWS-------- 101
F M + G + +Y +++ L K IKM+ W+
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 102 ---------LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
+ EM S D +N+LI + DA K+ EM G V T
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG----------RLK 202
YN LL+ L + +I ++ +G +P +Y++++ K G R+K
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 203 DAQEIFQDILIK-------------------------GYNLNVRTYSVMIDGYCKEGLFD 237
+ Q +L++ GY ++ ++ M+ + + ++D
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+A ++ + G PD VTY ++ ++GE KAE++L+ +
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 105/209 (50%), Gaps = 1/209 (0%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV 138
D Q I + L + A LL+++ ++ + D Y +++ + + A L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI-ALIKKIEEQGIQPNMYTYTVLMDGLCK 197
M G P ++TYN +LDV K R I ++ ++ +G++ + +T + ++ +
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G L++A+E F ++ GY TY+ ++ + K G++ EAL ++ +ME + C D+VT
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSL 286
Y ++ A + G +++A ++ M + +
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 8/280 (2%)
Query: 12 TFNILVEALC-KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
T+N ++ ALC +G K VF M G EP+ ++++L+ Y A ++
Sbjct: 458 TWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + G V +Y ++N L + +++++M SK Y+ ++ K
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLL--DVLCKS-HHVDRAIALIKKIEEQGIQPNMYT 187
++ N + I P+ + LL + C++ +RA L KK G +P+M
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK---HGYKPDMVI 633
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ ++ + A+ I + I G + ++ TY+ ++D Y + G +A ++ +E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
S PD V+Y +I+ ++G ++A ++L EM R +
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 144/283 (50%), Gaps = 6/283 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
ID ++ F+ L+ LC+ +V+ A+ +F ++ +I + + +++G+C++ V++AK
Sbjct: 209 IDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRRE-FGCDIKAMNMILNGWCVLGNVHEAK 267
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ ++ DV SY +IN L K + +A L M + D N++ID L
Sbjct: 268 RFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDAL 327
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG--IQP 183
C +R +A ++ E++ +G PNV+TYN LL LCK ++ L++++E +G P
Sbjct: 328 CFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP 387
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N T++ L L R KD + + + + Y++M Y + ++ +
Sbjct: 388 NDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S+ME SG PD TY I I L KG+ +A +EM+++ +
Sbjct: 445 SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 5/251 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+++ N+++ C GNV EAK + ++ P++VSY ++++ ++ KA +++
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M DV+ +I+ LC K + EA + E+ K + + YNSL+ LCK+
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 129 ERSFDAWKLVNEMNHRG--IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
R+ W+LV EM +G PN +T++ LL +S VD +++++ + +
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSD 422
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
Y ++ + + + +EI+ ++ G + RTY++ I G +G EAL +M
Sbjct: 423 LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Query: 247 ESSGCIPDAVT 257
S G +P+ T
Sbjct: 483 MSKGMVPEPRT 493
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 36/269 (13%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N +++ L K +E VF M K+ N +Y L++ Y +V++A +F
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G+ D+ ++ ++ LC+ K V+ A +L C R F
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLF----------------------CSRRREF 243
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
++ N +L+ C +V A K I +P++ +Y ++
Sbjct: 244 GC--------------DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI 289
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ L K G+L A E+++ + N +V+ + +ID C + EAL + ++ G
Sbjct: 290 NALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPD 349
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
P+ VTY +++ L K EK +L+ EM
Sbjct: 350 PNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 31/235 (13%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQ-------------------------------GL 41
FN L+ LC+E ++ +A+NV+ + Q GL
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGL 242
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
+P++V+Y+SL+D YC +E+ KA + + M + T DV +YT +I GL I D+A
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
+L EM D YN+ I C R DA KLV+EM +G+ PN TYN VL
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
++ + R+ L ++ PN + L+ + ++ A +++D+++KG+
Sbjct: 363 LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 41/211 (19%)
Query: 90 LCKIKM-VDEAWSLLNEMHSKKIIAD---TICYNSLIDGLCKLERSFDAWKLVNEMNH-- 143
LC ++ V+ W K+++ D T C+N+L+ LC+ + DA + + + H
Sbjct: 157 LCSVRQTVESFWKF------KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQF 210
Query: 144 -----------------------------RGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+G+ P+V+TYN L+DV CK +++A LI
Sbjct: 211 QPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLID 270
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEG 234
K+ E+ P++ TYT ++ GL +G+ A+E+ +++ G +V Y+ I +C
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIAR 330
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
+A L+ +M G P+A TY + R L
Sbjct: 331 RLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 143/284 (50%), Gaps = 18/284 (6%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E TF IL++ALC+ G V A + M + + + YS L+ C K+ + D+
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVI 236
Query: 69 NFM---VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ + + ++ YT+++ L + E S+LN+M ++ D +CY ++ G+
Sbjct: 237 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 296
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
E A KL +E+ G+ P+V TYN ++ LCK + ++ A+ ++ + + G +PN+
Sbjct: 297 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 356
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY-------CKEGLFDE 238
TY +L+ L K G L A+ +++++ G N N T+ +MI Y C GL +E
Sbjct: 357 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
A + ++SS +I L +KG ++A +LL +V
Sbjct: 417 AFNMNVFVKSSRIEE-------VISRLCEKGLMDQAVELLAHLV 453
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 143/285 (50%), Gaps = 7/285 (2%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
V + D F ++ A G ++EA VF + P+ + ++L+ LV++
Sbjct: 100 VSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALL--LVLVRKR 157
Query: 62 NKAKDIFNFMVQR---GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
+ + +V+ GV + ++ I+I+ LC+I VD A L+ M +I D Y
Sbjct: 158 QSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLY 217
Query: 119 NSLIDGLCKLERS--FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
+ L+ +CK + S FD + ++ P + Y ++ L + ++++ ++
Sbjct: 218 SRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQM 277
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ ++P++ YT+++ G+ A ++F ++L+ G +V TY+V I+G CK+
Sbjct: 278 KCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDI 337
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ AL +MS M G P+ VTY I+I+AL K G+ +A+ L +EM
Sbjct: 338 EGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEM 382
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 137/271 (50%), Gaps = 3/271 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + ++ ++ I +++ + V+ A +F G++ + S+++L+ C
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH 236
Query: 61 VNKAKDIFNFMVQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
V+ AK +FN ++G + D SY I+I+G K+ V+E +L EM D + Y+
Sbjct: 237 VSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYS 294
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI+GL + R D+ ++ + + H+G P+ YN ++ + D ++ +++ ++
Sbjct: 295 HLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDE 354
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+PN+ TY+ L+ GL K ++ DA EIF+++L +G + + C G A
Sbjct: 355 ECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAA 414
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+++ K +GC Y ++++ L + G+
Sbjct: 415 MVIYQKSRKAGCRISESAYKLLLKRLSRFGK 445
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++NI++ K G V+E + V MV+ G P+ +SYS L++G +N + +IF+ +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+G D Y +I + DE+ M ++ + Y+ L+ GL K +
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKV 376
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA ++ EM RG+ P L LC A+ + +K + G + + Y +L
Sbjct: 377 SDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLL 436
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ L + G+ ++ ++ GY +V Y ++DG C G + A+++M + G
Sbjct: 437 LKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLL 278
P+ Y + L + E A KL
Sbjct: 497 CPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 3/250 (1%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
+ G+ ++ SYS ++ K + D+ MV GV D++ TI ++ ++ V
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF-DAWKLVNEMNHRGIPPNVITYNPL 156
A L E S + T +N+L+ LC ERS A K V IP + +YN +
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLC--ERSHVSAAKSVFNAKKGNIPFDSCSYNIM 261
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ K V+ ++K++ E G P+ +Y+ L++GL + GR+ D+ EIF +I KG
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ Y+ MI + FDE++ +M C P+ TY ++ L K + A +
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 277 LLREMVARSL 286
+ EM++R +
Sbjct: 382 IFEEMLSRGV 391
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ + T++ LV L K V +A +F M+ +G+ P +S + C + A
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV 416
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
I+ + G +Y +++ L + ++ +EM +D Y ++DGLC
Sbjct: 417 IYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC 476
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ +A ++ E +G PN Y+ L L S+ + A L KI++ N
Sbjct: 477 IIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENAR 536
Query: 187 TY 188
++
Sbjct: 537 SF 538
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 135/275 (49%), Gaps = 4/275 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ +N ++ K +EA+ + M + G+ PN VSYS+L+ Y + +A
Sbjct: 256 ITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEAL 315
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + D+ + I+I+ ++ MV EA L + I + + YN+++
Sbjct: 316 SVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVY 375
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ E +A L M + I NV+TYN ++ + K+ ++A L+++++ +GI+PN
Sbjct: 376 GEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNA 435
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TY+ ++ K G+L A +FQ + G ++ Y MI Y + GL A L+ +
Sbjct: 436 ITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHE 495
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
++ +PD + I L K G E+A + R+
Sbjct: 496 LK----LPDNIPRETAITILAKAGRTEEATWVFRQ 526
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 138/270 (51%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ L+ + KEG A + M + + ++V YS+L++ + + +KA IF+ +
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL 251
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+T D+ +Y +IN K K+ EA L+ EM+ ++ +T+ Y++L+ + +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + EM ++ T N ++DV + V A L + + I+PN+ +Y +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTI 371
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ + +A +F+ + K NV TY+ MI Y K ++A L+ +M+S G
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P+A+TY II K G+ ++A L +++
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V +N+++ + + A +F M ++ L P+ +YS+L+ + + A
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID--GLCK 127
M Q V+ D+ Y+ +I ++ +A S+ + + I D + YNS+I+ G K
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
L R +A L+ EMN G+ PN ++Y+ LL V ++H A+++ +++E ++ T
Sbjct: 275 LFR--EARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 332
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+++D ++ +K+A +F + NV +Y+ ++ Y + LF EA+ L M+
Sbjct: 333 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 392
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ VTY +I+ K E+EKA L++EM +R +
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 129/257 (50%), Gaps = 5/257 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ V ++N ++ + EA ++F +M ++ +E N+V+Y++++ Y E KA
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ M RG+ + +Y+ II+ K +D A +L ++ S + D + Y ++I
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
++ A +L++E+ +P N I + +L K+ + A + ++ E G ++
Sbjct: 481 ERVGLMGHAKRLLHELK---LPDN-IPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ +++ + R + E+F+ + GY + +++++ Y K+ F++A + +
Sbjct: 537 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 596
Query: 246 MESSGCI-PDAVTYGII 261
M+ GC+ PD V + ++
Sbjct: 597 MQEEGCVFPDEVHFQML 613
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
Query: 101 SLLNEMHSK-KIIADTICYNSLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLD 158
+LL+ +H + K YN ++ + + + FD A L +EM R + P+ TY+ L+
Sbjct: 140 ALLDWVHEEAKYTPSVFAYNVVLRNVLR-AKQFDIAHGLFDEMRQRALAPDRYTYSTLIT 198
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
K D A++ ++K+E+ + ++ Y+ L++ ++ A IF + G
Sbjct: 199 SFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITP 258
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
++ Y+ MI+ Y K LF EA +L+ +M +G +P+ V+Y ++
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLL 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 77 THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD-AW 135
T V +Y +++ + + K D A L +EM + + D Y++LI K E FD A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGK-EGMFDSAL 210
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+ +M + +++ Y+ L+++ + +AI++ +++ GI P++ Y +++
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
K ++A+ + +++ G N +YS ++ Y + F EAL + ++M+ C D
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 256 VTYGIII 262
T I+I
Sbjct: 331 TTCNIMI 337
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 87/144 (60%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
M++ + P ++Y+S++DG+C V+ AK + + M +G + DV +++ +ING CK K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
VD + EMH + I+A+T+ Y +LI G C++ A L+NEM G+ P+ IT++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQ 179
+L LC + +A A+++ +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKS 144
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 80/140 (57%)
Query: 110 KIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRA 169
I TI YNS+IDG CK +R DA ++++ M +G P+V+T++ L++ CK+ VD
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 170 IALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
+ + ++ +GI N TYT L+ G C+VG L AQ++ +++ G + T+ M+ G
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 230 YCKEGLFDEALILMSKMESS 249
C + +A ++ ++ S
Sbjct: 125 LCSKKELRKAFAILEDLQKS 144
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 79/131 (60%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N +++ CK+ V +AK + M +G P++V++S+L++GYC K V+ +IF M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+RG+ + +YT +I+G C++ +D A LLNEM S + D I ++ ++ GLC +
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 132 FDAWKLVNEMN 142
A+ ++ ++
Sbjct: 132 RKAFAILEDLQ 142
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%)
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
I P ITYN ++D CK VD A ++ + +G P++ T++ L++G CK R+ +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
EIF ++ +G N TY+ +I G+C+ G D A L+++M S G PD +T+ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 266 FKKGENEKAEKLLREMVARSLH 287
K E KA +L ++ H
Sbjct: 126 CSKKELRKAFAILEDLQKSEDH 147
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%)
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM 141
+Y +I+G CK VD+A +L+ M SK D + +++LI+G CK +R + ++ EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
+ RGI N +TY L+ C+ +D A L+ ++ G+ P+ T+ ++ GLC L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 202 KDAQEIFQDI 211
+ A I +D+
Sbjct: 132 RKAFAILEDL 141
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 60/102 (58%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V TF+ L+ CK V +F M ++G+ N V+Y++L+ G+C V +++ A+D+
Sbjct: 44 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
N M+ GV D ++ ++ GLC K + +A+++L ++ +
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 152/311 (48%), Gaps = 44/311 (14%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ +V +N ++ A C+ G +EA + M K+G+ P +V+++ L+ GY + + + A D
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD 303
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL----------------------- 103
+ M G+T DV ++T +I+GL M +A +
Sbjct: 304 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 363
Query: 104 --------NEMHSKKI----IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+E+HS + I D + NSL+D K + DA K+ + + ++ +V
Sbjct: 364 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVY 419
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
T+N ++ C++ + +A L ++++ ++PN+ T+ ++ G K G +A ++FQ +
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 212 LIKG-YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
G N T++++I GY + G DEAL L KM+ S +P++VT I +L
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT----ILSLLPACA 535
Query: 271 NEKAEKLLREM 281
N K++RE+
Sbjct: 536 NLLGAKMVREI 546
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 10/243 (4%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L+ K G + +A+ VF M E N+ ++S+++ Y + +F M++ G
Sbjct: 121 LLSMYAKCGCIADARKVFDSM----RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI-CYNSLIDGLCKLERSFDA 134
V D + I+ G V EA +++ + K ++ + NS++ K A
Sbjct: 177 VLPDDFLFPKILQGCANCGDV-EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 235
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
K M R +VI +N +L C++ + A+ L+K++E++GI P + T+ +L+ G
Sbjct: 236 TKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
++G+ A ++ Q + G +V T++ MI G G+ +AL + KM +G +P+
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 255 AVT 257
AVT
Sbjct: 352 AVT 354
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
+ + V ++ VK G +++ +SL+D Y ++ A+ +F+ + + DV ++
Sbjct: 368 INQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNS 423
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+I G C+ +A+ L M + + I +N++I G K +A L M G
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Query: 146 -IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY---------------- 188
+ N T+N ++ ++ D A+ L +K++ PN T
Sbjct: 484 KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 189 -------------------TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDG 229
L D K G ++ ++ IF + K ++ T++ +I G
Sbjct: 544 REIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGG 599
Query: 230 YCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
Y G + AL L ++M++ G P+ T II A G ++ +K+
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 11/239 (4%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
MV G P I + S L C + + + + +G ++QSY+++I+ LCK
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGR 412
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
V E+++ L EM + + D YN+LI+ CK E A KL +EM G N+ TYN
Sbjct: 413 VRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV 472
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
L+ L + + ++ L K+ E+GI+P+ Y L++GLCK +++ A E+F+ + +
Sbjct: 473 LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Query: 216 Y-NLNVRTYSVMIDGYCKEGLFDEALILMSK---MESSG-------CIPDAVTYGIIIR 263
+ + R S + C G EA L+ + +E +G C+ DA I IR
Sbjct: 533 HKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVADAKEVEIGIR 591
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 130/273 (47%), Gaps = 1/273 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+ ++ EA GN+ E + V K G+ P Y + + K + +AK++ +
Sbjct: 260 AYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVI 319
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V D +I + + D A L M S + + L LC+ ++S
Sbjct: 320 VSGKFPMDNDILDALIGSVSAVD-PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKS 378
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
K ++ +G + +Y+ ++ LCK+ V + +++++++G+ P++ Y L
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
++ CK ++ A++++ ++ ++G +N+ TY+V+I +EG +E+L L KM G
Sbjct: 439 IEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
PD Y +I L K+ + E A ++ R+ + R
Sbjct: 499 EPDETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+E++++++++ LCK G V+E+ M K+GL P++ Y++L++ C + + AK +
Sbjct: 395 SELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKL 454
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC- 126
++ M G ++ +Y ++I L + +E+ L ++M + I D Y SLI+GLC
Sbjct: 455 WDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCK 514
Query: 127 --KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
K+E + + ++ E +H+ + V++ L LC + H A L+++ E
Sbjct: 515 ETKIEAAMEVFRKCMERDHKTVTRRVLSEFVL--NLCSNGHSGEASQLLRERE 565
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
+++ +LCK +A + + +P+ ++Y + + + + + + + + +
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKL 287
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
GV Y I L K + EA + + S K D ++LI + ++ A
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPD-SA 346
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+ + M G P + T + L LC+ D I + + +G + +Y++++
Sbjct: 347 VEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISF 406
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
LCK GR++++ Q++ +G +V Y+ +I+ CK + A L +M GC +
Sbjct: 407 LCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMN 466
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
TY ++IR L ++GE E++ +L +M+ R +
Sbjct: 467 LTTYNVLIRKLSEEGEAEESLRLFDKMLERGI 498
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+RT + L + LC+ + ++ +G + SYS ++ C V ++
Sbjct: 362 IRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQ 421
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M + G+ DV Y +I CK +M+ A L +EM + + YN LI L +
Sbjct: 422 EMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEG 481
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ ++ +L ++M RGI P+ Y L++ LCK ++ A+ + +K E+ T
Sbjct: 482 EAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMER--DHKTVTRR 539
Query: 190 VLMD---GLCKVGRLKDAQEIFQD 210
VL + LC G +A ++ ++
Sbjct: 540 VLSEFVLNLCSNGHSGEASQLLRE 563
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIK 94
+V + ++P ++++ SL G+ FN+ Q+ G +HD SY I L +
Sbjct: 49 LVARVIDPFLLNHHSLALGF------------FNWAAQQPGYSHDSISYHSIFKSLSLSR 96
Query: 95 MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG--IPPNVIT 152
+L ++ S KI+ D+ Y SLID L ++ A+ ++ E G I P+V
Sbjct: 97 QFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVC- 155
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
N LL L D A L K+ +G+ N + V + C+ + ++
Sbjct: 156 -NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVK 214
Query: 213 IKGYNLNVRTYSVMI-DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
N+N +++I CK +A ++ ++ + C PD + Y +I A G
Sbjct: 215 KANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTG 272
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N+L+ L +EG +E+ +F M+++G+EP+ Y SL++G C ++ A ++F
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 72 VQR---GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYNSLIDGLCK 127
++R VT V S ++ LC EA LL E H + A + + D +
Sbjct: 529 MERDHKTVTRRVLSEFVL--NLCSNGHSGEASQLLREREHLEHTGAHVVLLKCVADAK-E 585
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNP-LLDVLCKSHHVDRAIALIKKIE 177
+E + + E++ P V T + LL C S D + I+ IE
Sbjct: 586 VEIGIRHMQWIKEVS----PSLVHTISSDLLASFCSSSDPDSILPFIRAIE 632
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 4/268 (1%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE--VNKAKDIFNFMV 72
++ ALC + N A + MV G P SY+S++ CL +E + + N +
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK--CLFQENIIEDLASLVNIIQ 539
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ DV +Y I++N LCK D A+++++ M + Y+S+I L K R
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A + +M GI P+ I Y +++ ++ +D A L++++ + ++P+ +TYTVL+
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G K+G ++ + +L G + NV Y+ +I + K+G F + L M +
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLRE 280
D + Y ++ L++ +K +++ E
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVE 747
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 132/307 (42%), Gaps = 37/307 (12%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+ I+V LCK+ + A + M + GL P + YSS++ V +A++ F
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M++ G+ D +Y I+IN + +DEA L+ E+ + + Y LI G K+
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKM 665
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ +++M G+ PNV+ Y L+ K + L + E I+ + Y
Sbjct: 666 GMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAY 725
Query: 189 TVLMDGLCK-VGRLKDAQEIFQ-------DILIKGYNL---------------------- 218
L+ GL + + R K Q I + LI+ L
Sbjct: 726 ITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK 785
Query: 219 -------NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
N+ ++ +I GYC G DEA + M+ G +P+ VTY I++++ + G+
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 272 EKAEKLL 278
E A L
Sbjct: 846 ESAIDLF 852
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + L CK G EA+ +F M G + V Y+ LM YC + A ++
Sbjct: 237 VNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYL 296
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
MV+R D + +I+G K+ M+D+ + ++M K + ++ Y+ +I CK
Sbjct: 297 RMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 130 RSFDAWKL-VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A +L VN I NV Y L+ K +D+A+ L+ ++ + GI P+ TY
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKG-----------------------------YNLN 219
VL+ L K LK A I Q IL G NL
Sbjct: 417 FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLA 476
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+V+ C + + AL + KM + GC P +Y +I+ LF++
Sbjct: 477 AVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 31/311 (9%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSY----------------- 48
I V + L+ K+G + +A ++ M+ G+ P+ ++Y
Sbjct: 374 ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAM 433
Query: 49 ---SSLMDGYCLVK----------EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
S++D C + EV K + + + ++ ++ LC +
Sbjct: 434 VILQSILDNGCGINPPVIDDLGNIEV-KVESLLGEIARKDANLAAVGLAVVTTALCSQRN 492
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNP 155
A S + +M + YNS+I L + D LVN + P+V TY
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLI 552
Query: 156 LLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
+++ LCK + D A A+I +EE G++P + Y+ ++ L K GR+ +A+E F +L G
Sbjct: 553 VVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG 612
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+ Y +MI+ Y + G DEA L+ ++ P + TY ++I K G EK
Sbjct: 613 IQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGC 672
Query: 276 KLLREMVARSL 286
+ L +M+ L
Sbjct: 673 QYLDKMLEDGL 683
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Query: 37 VKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMV 96
VK+ + PN+ +++++ GYC +++A + M + G+ ++ +YTI++ + +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+ A L + + D + Y++L+ GLC +R DA L+ EM GI PN +Y L
Sbjct: 846 ESAIDLFEGTNCE---PDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
L LC S A+ ++K + I P +T L+ LC+ +L++A+ +F ++ G
Sbjct: 903 LQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Query: 217 NL 218
+L
Sbjct: 963 SL 964
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 42/314 (13%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +L+ K G +++ M++ GL PN+V Y++L+ + + + +F M
Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLM 713
Query: 72 VQRGVTHDVQSYTIIINGLCKI--------------------------KMVDEAWSLLNE 105
+ + HD +Y +++GL + +V SL N
Sbjct: 714 GENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNY 773
Query: 106 MHS-----------KKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYN 154
K II + +N++I G C R +A+ + M GI PN++TY
Sbjct: 774 GSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYT 833
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
L+ ++ ++ AI L E +P+ Y+ L+ GLC R DA + ++
Sbjct: 834 ILMKSHIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKS 890
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
G N N +Y ++ C L EA+ ++ M + P ++ + +I L ++ + +A
Sbjct: 891 GINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREA 950
Query: 275 EKLLREMV--ARSL 286
L MV RSL
Sbjct: 951 RALFAIMVQSGRSL 964
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 2/269 (0%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+V L K EA+ ++ G P+ S S ++D C +A F + +RG
Sbjct: 137 MVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG 196
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS-KKIIADTICYNSLIDGLCKLERSFDA 134
+ + GLC ++EA +L+ + ++ Y SL CK + +A
Sbjct: 197 SGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEA 256
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L + M G + + Y L+ CK +++ A+ L ++ E+ + + + L+ G
Sbjct: 257 EALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHG 316
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
K+G L + +F ++ KG NV TY +MI YCKEG D AL L S I
Sbjct: 317 FMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 255 AV-TYGIIIRALFKKGENEKAEKLLREMV 282
V Y +I +KKG +KA LL M+
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRML 405
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 30/317 (9%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + + FN L+ K G + + + +F+ M+K+G++ N+ +Y ++ YC
Sbjct: 298 MVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 61 VNKAKDIF-NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
V+ A +F N ++ +V YT +I G K +D+A LL M I+ D I Y
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYF 417
Query: 120 SLIDGLCKLERSFDAWKLVNEM--NHRGIPPNVITYNPLLDV------------------ 159
L+ L K A ++ + N GI P VI ++V
Sbjct: 418 VLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAA 477
Query: 160 ---------LCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
LC + A++ I+K+ G P ++Y ++ L + ++D +
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
I + +V TY ++++ CK+ D A ++ ME G P Y II +L K+G
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 271 NEKAEKLLREMVARSLH 287
+AE+ +M+ +
Sbjct: 598 VVEAEETFAKMLESGIQ 614
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 2/265 (0%)
Query: 25 NVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN-FMVQRGVTHDVQSY 83
++ EA V V G+E + Y +L+ + + A+ +N ++ G+ D
Sbjct: 75 SISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVL 134
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
++ L K++ DEA + L+ + + + ++D LC +R +A+ ++
Sbjct: 135 DSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKE 194
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP-NMYTYTVLMDGLCKVGRLK 202
RG + L LC H++ AI ++ + P + Y L CK G
Sbjct: 195 RGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAA 254
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIII 262
+A+ +F + + GY ++ Y+ ++ YCK+ A+ L +M D + +I
Sbjct: 255 EAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLI 314
Query: 263 RALFKKGENEKAEKLLREMVARSLH 287
K G +K + +M+ + +
Sbjct: 315 HGFMKLGMLDKGRVMFSQMIKKGVQ 339
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 17/242 (7%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L++ L +EG VKEA F M + +P++ +Y+++++ C V KA+ + + M G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 76 VTH--DVQSYTIIINGLCKIKMVD-----------EAWSLLNEMHSKKIIADTICYNSLI 122
+ D +YTI+I+ C+ M EA + EM + + D + YN LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
DG CK R A +L +M +G PN +TYN + ++ ++ AI +++ +++ G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 183 -PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL---FDE 238
P TYT L+ L + R +A+++ +++ G TY ++ D EGL DE
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDE 410
Query: 239 AL 240
L
Sbjct: 411 EL 412
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 18/208 (8%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE--PNIVSYSSLMDGYC--------- 56
+V +N ++ ALC+ GN K+A+ + M G P+ +Y+ L+ YC
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 57 --LVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD 114
+ + + +A +F M+ RG DV +Y +I+G CK + A L +M +K + +
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 115 TICYNSLIDGLC---KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA 171
+ YNS I ++E + + + + ++ H G+P + TY PL+ L ++ A
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH-GVPGSS-TYTPLIHALVETRRAAEARD 375
Query: 172 LIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
L+ ++ E G+ P YTY ++ D L G
Sbjct: 376 LVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Query: 148 PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ--PNMYTYTVLMDGLCKVG------ 199
P+V YN +++ LC+ + +A L+ +++ G + P+ YTYT+L+ C+ G
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 200 -----RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
R+ +A +F+++L +G+ +V TY+ +IDG CK AL L M++ GC+P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREM 281
VTY IR E E A +++R M
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 20/254 (7%)
Query: 53 DGYCLVKEVNKAKDIFNFMVQRGVTHD------VQSYTIIINGLCKIKMVDEAWSLLNEM 106
D CL+ + N K +++F+ Q + S T ++ L + V EA + M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI--PPNVITYNPLLDVLCK-- 162
D YN++I+ LC++ A L+++M G PP+ TY L+ C+
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 163 ---------SHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILI 213
+ A + +++ +G P++ TY L+DG CK R+ A E+F+D+
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKT 311
Query: 214 KGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG-CIPDAVTYGIIIRALFKKGENE 272
KG N TY+ I Y + A+ +M M+ G +P + TY +I AL +
Sbjct: 312 KGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAA 371
Query: 273 KAEKLLREMVARSL 286
+A L+ EMV L
Sbjct: 372 EARDLVVEMVEAGL 385
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 13/212 (6%)
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+F M + + D Y III+GLCK DEA ++ + + D YN +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
L R A KL EM RG+ P+ ITYN ++ LCK + + +A + + +
Sbjct: 60 SLGR---AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T+ L++G CK R+KD +F ++ +G NV TY+ +I G+ + G F+ AL + +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
S+G ++T+ I+ L + E KA +L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+D + +NI++ LCK G EA N+F ++ GL+P++ +Y+ ++ + +A+
Sbjct: 10 MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSSLGRAE 65
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++ M++RG+ D +Y +I+GLCK + +A +K+ +N+LI+G
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGY 116
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK R D L EM RGI NVITY L+ + + A+ + +++ G+ +
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSS 176
Query: 186 YTYTVLMDGLCKVGRLKDA 204
T+ ++ LC L+ A
Sbjct: 177 ITFRDILPQLCSRKELRKA 195
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 32 VFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC 91
+F VM + ++ + Y+ ++ G C + ++A +IF ++ G+ DVQ+Y ++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+ + A L EM + ++ DTI YNS+I GLCK + A R + +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
T+N L++ CK+ V + L ++ +GI N+ TYT L+ G +VG A +IFQ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
+ G + T+ ++ C +A+ ++ ++ S + + VT
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 106 MHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
M + DT YN +I GLCK + +A + + G+ P+V TYN ++ +
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSS 60
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
+ RA L ++ +G+ P+ TY ++ GLCK +L A+++ + + T++
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCSTFNT 111
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
+I+GYCK + + L +M G + + +TY +I + G+ A + +EMV+
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 286 LH 287
++
Sbjct: 172 VY 173
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN L+ CK VK+ N+F M ++G+ N+++Y++L+ G+ V + N A DIF M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLL 103
V GV ++ I+ LC K + +A ++L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + + + T+N ++ LCK+ + +A+ V + ++++L++GYC
Sbjct: 71 MIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATR 121
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V ++F M +RG+ +V +YT +I+G ++ + A + EM S + + +I +
Sbjct: 122 VKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRD 181
Query: 121 LIDGLC 126
++ LC
Sbjct: 182 ILPQLC 187
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 5/249 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKA 64
I TFN ++ + +EG + + ++ M ++ G PN+ SY+ LM+ YC +++A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
+ ++ M RGV +D+ +Y +I GLC V +A L +M K I + Y L++G
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR---AIALIK-KIEEQG 180
CK + EM +G + +T L++ LC R A ++K + E
Sbjct: 361 YCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAM 420
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P+ Y +L+ LC+ G++ A I +++ KG+ + TY IDGY G + +
Sbjct: 421 FYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSA 480
Query: 241 ILMSKMESS 249
+L +M S
Sbjct: 481 LLAIEMAES 489
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D ++ F L+++ + G+ A VF +++K L+ + + ++ + +N
Sbjct: 142 DRVLKVFRSLIKSYNRCGS---APFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQIS 198
Query: 67 IFNFMV-----QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
N ++ +RG ++ + Y + GL + VDEA ++ KI + +NS+
Sbjct: 199 TCNALITEVSRRRGASNGYKMYREVF-GLDDVS-VDEAKKMIG-----KIKPNATTFNSM 251
Query: 122 IDGLCKLERSFDAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+ + + ++ EM G PNV +YN L++ C + A + ++++ +G
Sbjct: 252 MVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRG 311
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ ++ Y ++ GLC + A+E+F+D+ +KG TY +++GYCK G D L
Sbjct: 312 VVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGL 371
Query: 241 ILMSKMESSGCIPDAVTYGIIIRAL 265
++ +M+ G D +T ++ L
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGL 396
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
+ ++I K +D A ++ ++ S+ I A N+LI + + + + +K+ E+
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 143 H-------------RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTY 188
I PN T+N ++ + + + +++EE+ G PN+Y+Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
VLM+ C G + +A+++++++ ++G ++ Y+ MI G C +A L M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G +TY ++ K G+ + + REM
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 377
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ I+ T+ LV CK G+V V+ M ++G E + ++ +L++G C ++
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 61 ---VNKAKDIFNFMVQRGVTHDVQS-YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI 116
V +A DI V+ + + ++ Y +++ LC+ +D A ++ EM K
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 117 CYNSLIDG 124
Y + IDG
Sbjct: 462 TYRAFIDG 469
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 18/278 (6%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T N VE LCKE V+EAK VF + +K+ ++P+ ++Y +++ G+C V ++ +A ++N
Sbjct: 181 VETMNRGVETLCKEKLVEEAKFVF-IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWN 239
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK-IIADTICYNSLIDGLCKL 128
M+ G D+++ I+ L K DEA + M SK+ D Y +ID LCK
Sbjct: 240 LMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKN 299
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R A K+ +EM RG+ + +T+ L+ L V A L++ +E P++ Y
Sbjct: 300 GRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVE----NPDISIY 355
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ GL K+ R +A E+F+ ++ +G + TY +++ G+ + +
Sbjct: 356 HGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGH------------LGRRGR 403
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
G P I + + K G+ + K + + R L
Sbjct: 404 KGPDPLVNFDTIFVGGMIKAGKRLETTKYIERTLKRGL 441
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 123/249 (49%), Gaps = 7/249 (2%)
Query: 38 KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD 97
K+GL N ++ ++ +E+ K + F+ M G ++V++ + LCK K+V+
Sbjct: 140 KRGL-VNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVE 198
Query: 98 EAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
EA + ++ + I D I Y ++I G C + +A KL N M G ++ ++
Sbjct: 199 EAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIM 257
Query: 158 DVLCKSHHVDRAIALIK-KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ L K + D A + + ++G + Y V++D LCK GR+ A+++F ++ +G
Sbjct: 258 ETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGV 317
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
++ T++ +I G + EA L+ +E+ PD Y +I+ L K +A +
Sbjct: 318 YVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATE 373
Query: 277 LLREMVARS 285
+ R+M+ R
Sbjct: 374 VFRKMIQRG 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 77 THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWK 136
TH + ++ + + +D W L E+ + ++ D + ++ L
Sbjct: 109 THTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDK-TFRIVLKTLASARELKKCVN 167
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
+ MN G NV T N ++ LCK V+ A + K++E I+P+ TY ++ G C
Sbjct: 168 YFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFC 226
Query: 197 KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS-GCIPDA 255
VG L +A +++ ++ +G+++++ +++ K+ FDEA + M S G D
Sbjct: 227 DVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDG 286
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
Y ++I L K G + A K+ EM R ++
Sbjct: 287 GFYRVMIDWLCKNGRIDMARKVFDEMRERGVY 318
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 135/277 (48%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D +N +++ L K ++ A F + G + + +Y++LM + KA +
Sbjct: 240 DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFE 299
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
I+ M + D +Y +II L K +D A+ L +M +K+ ++SL+D +
Sbjct: 300 IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMG 359
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K R + K+ EM G P+ + L+D K+ +D A+ L ++++ G +PN
Sbjct: 360 KAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
YT++++ K G+L+ A +F+D+ G+ TYS +++ + G D A+ + + M
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
++G P +Y ++ L K + A K+L EM A
Sbjct: 480 TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 99/215 (46%)
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G D Q+Y ++ + +A+ + M + D Y +I L K R
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLD 330
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A+KL +M R + P+ ++ L+D + K+ +D ++ + +++ G +P+ + L+
Sbjct: 331 AAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D K G+L A ++ ++ G+ N Y+++I+ + K G + A+ + ME +G +
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
P TY ++ G+ + A K+ M L
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLR 485
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 9/275 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ +++ +L K G + A +F M ++ L P+ +SSL+D ++ + ++ M
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
G + +I+ K +D A L +EM + Y +I+ K +
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
A + +M G P TY+ LL++ S VD A+ + + G++P + +Y L
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISL 494
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ L + A +I ++ GY+++V V++ Y K+ D AL + M SSG
Sbjct: 495 LTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGI 553
Query: 252 IPDAVTYGIIIRALF----KKGENEKAEKLLREMV 282
T IIR LF K G + A LL +V
Sbjct: 554 ----KTNNFIIRQLFESCMKNGLYDSARPLLETLV 584
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 1/269 (0%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE-VNKAKDIFNFMV 72
N ++ L K G + +F M + GL+P++V+Y++L+ G VK KA ++ +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G+ D Y ++ +EA + + +M + + Y+SL++
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A +L+ EM G+ PN + LL V K DR+ L+ ++E G N Y +LM
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
DGL K G+L++A+ IF D+ KG + S+MI C+ F EA L E++
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
D V ++ A + GE E +++++M
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKM 438
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 139/279 (49%), Gaps = 3/279 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V+ N+++ G ++ +F M + G + ++ +YSS + + K V+KA +I+
Sbjct: 97 KVQDLNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIY 154
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ +V I++ L K +D L ++M + D + YN+L+ G K+
Sbjct: 155 QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV 214
Query: 129 ERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ + A +L+ E+ H GI + + Y +L + + + A I++++ +G PN+Y
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y+ L++ G K A E+ ++ G N + ++ Y K GLFD + L+S++E
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
S+G + + Y +++ L K G+ E+A + +M + +
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 109/253 (43%), Gaps = 36/253 (14%)
Query: 17 VEALC-KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
V A+C G +EA+N M +G PNI YSSL++ Y + KA ++ M G
Sbjct: 243 VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIG 302
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ + T ++ K + D + LL+E+ S + + Y L+DGL K + +A
Sbjct: 303 LVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEAR 362
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
+ ++M +G ++ + Y ++++ L
Sbjct: 363 SIFDDMKGKG-----------------------------------VRSDGYANSIMISAL 387
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
C+ R K+A+E+ +D ++ + M+ YC+ G + + +M KM+ PD
Sbjct: 388 CRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDY 447
Query: 256 VTYGIIIRALFKK 268
T+ I+I+ K+
Sbjct: 448 NTFHILIKYFIKE 460
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 107/215 (49%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++ L+ + +G+ K+A + M GL PN V ++L+ Y ++++++ + +
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G + Y ++++GL K ++EA S+ ++M K + +D + +I LC+ +R
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFK 394
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A +L + +++ N +L C++ ++ + ++KK++EQ + P+ T+ +L+
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
K A + D+ KG+ L S +I
Sbjct: 455 KYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLI 489
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 122/247 (49%), Gaps = 5/247 (2%)
Query: 43 PNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ---RGVTHDVQSYTIIINGLCKIKMVDEA 99
P+ Y++LM GY V + M + R D +YT +++ ++D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH-RGIPPNVITYNPLLD 158
+L EM + A+ I YN L+ G CK + A L+ EM GI P+V++YN ++D
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY-N 217
A+A ++ +GI P +YT LM G+ K A +F +++
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVK 591
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKL 277
+++ ++++++GYC+ GL ++A ++S+M+ +G P+ TYG + + + + A L
Sbjct: 592 VDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLL 651
Query: 278 LREMVAR 284
+E+ R
Sbjct: 652 WKEIKER 658
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVK 59
M + A T+N+L++ CK+ + A+++ M + G+EP++VSY+ ++DG L+
Sbjct: 478 MARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILID 537
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICY 118
+ A FN M RG+ SYT ++ A + +EM + ++ D I +
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAW 597
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N L++G C+L DA ++V+ M G PNV TY L + + ++ A+ L K+I+E
Sbjct: 598 NMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ C V + + + D + + D + F +
Sbjct: 658 R----------------CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKK 701
Query: 239 ALILMSKMESSGCIPDAVTY 258
AL +++ ME +G P+ Y
Sbjct: 702 ALEIIACMEENGIPPNKTKY 721
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 12/162 (7%)
Query: 137 LVNEMNHRGIPP--------NVITYNPLLDVLCKSHHVD---RAIALIKKIEEQGIQPNM 185
L N ++ G PP + Y L+ K+ V R + +++ +++ P+
Sbjct: 393 LPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDE 452
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
TYT ++ G + A+++ ++ G N TY+V++ GYCK+ D A L+ +
Sbjct: 453 VTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLRE 512
Query: 246 M-ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M E +G PD V+Y III ++ A EM R +
Sbjct: 513 MTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI 554
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQ--GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
FN L+ A + G V A +V A M + ++P+ +S +LM C +V +AK+++
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ + G+ + YTI +N K D A S+ +M K + D + +++LID +
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A+ ++ + +GI I+Y+ L+ C + +A+ L +KI+ ++P + T
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
L+ LC+ +L A E +I G N TYS+++ ++ F+ + L+S+ + G
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Query: 251 CIPDAV 256
P+ +
Sbjct: 815 VSPNLI 820
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
A+ + + L+ + K G V VF M G+E N+ ++ +L+DG +V KA
Sbjct: 500 ADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGA 559
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK--KIIADTICYNSLIDGL 125
+ + + V D + +I+ + VD A+ +L EM ++ I D I +L+
Sbjct: 560 YGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKAC 619
Query: 126 C---KLERSFDAWKLVNEMNHRGIP--------------------------------PNV 150
C ++ER+ + ++++++ RG P P+
Sbjct: 620 CNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+ ++ L+DV + +D A +++ + QGI+ +Y+ LM C K A E+++
Sbjct: 680 VFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
I + T + +I C+ +A+ + ++++ G P+ +TY +++ A +K +
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 271 NEKAEKLLRE 280
E + KLL +
Sbjct: 800 FEVSFKLLSQ 809
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 121/252 (48%), Gaps = 12/252 (4%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+A K+ VKEA F ++ L P + +++ LM +++ A+ + + + G
Sbjct: 442 FFKACKKQRAVKEAFR-FTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESG 497
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---LERSF 132
+T D + YT +I+ K VD + + ++M + + A+ + +LIDG + + ++F
Sbjct: 498 MTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAF 557
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIK--KIEEQGIQPNMYTYTV 190
A+ ++ N + P+ + +N L+ +S VDRA ++ K E I P+ +
Sbjct: 558 GAYGILRSKN---VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGA 614
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
LM C G+++ A+E++Q I G Y++ ++ K G +D A + M+
Sbjct: 615 LMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKD 674
Query: 251 CIPDAVTYGIII 262
PD V + +I
Sbjct: 675 VTPDEVFFSALI 686
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ + TFN+L+ +++ A+ V ++ + G+ + Y++L+ +V+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F+ M GV ++ ++ +I+G + V +A+ + SK + D + +N+LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 126 CK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ ++R+FD + H I P+ I+ L+ C + V+RA + + I + GI+
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHP-IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIR 641
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
YT+ ++ K G A I++D+ K + +S +ID + DEA +
Sbjct: 642 GTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGI 701
Query: 243 MSKMESSGCIPDAVTYGIIIRA 264
+ +S G ++Y ++ A
Sbjct: 702 LQDAKSQGIRLGTISYSSLMGA 723
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
ID + + L++A C G V+ AK V+ ++ K G+ Y+ ++ + + A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I+ M ++ VT D ++ +I+ KM+DEA+ +L + S+ I TI Y+SL+
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + A +L ++ + P + T N L+ LC+ + + +A+ + +I+ G++PN
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 186 YTYTVLM 192
TY++LM
Sbjct: 785 ITYSMLM 791
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 5/199 (2%)
Query: 88 NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF-DAWKLVNEMNHRGI 146
N L + + + SLL ++ + ++ Y++ CK +R+ +A++ + +
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI----L 463
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P + T+N L+ V S ++ A +++ ++E G+ + YT L+ K G++ E
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+F + G N+ T+ +IDG + G +A + S PD V + +I A
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 267 KKGENEKAEKLLREMVARS 285
+ G ++A +L EM A +
Sbjct: 584 QSGAVDRAFDVLAEMKAET 602
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 115/226 (50%)
Query: 57 LVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTI 116
L +N+A +I M G +S+ I+N L K+ DE + + D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
C N LI GLC+ A +L++E + PNV+T++PL+ C + A L++++
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
E++ I+P+ T+ +L+ GL K GR+++ ++ + + +KG N TY ++ G +
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
EA +MS+M S G P ++Y ++ L + + + +LR+MV
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMV 369
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 123/256 (48%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSY 83
G + A + M G P+ S++ +++ K ++ IF + GV D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
I+I GLC+ ++ A LL+E +K + + ++ LI G C + +A+KL+ M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
I P+ IT+N L+ L K V+ I L+++++ +G +PN TY ++ GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIR 263
A+E+ ++ G + +Y M+ G C+ E ++ +M + G +P + + +++
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 264 ALFKKGENEKAEKLLR 279
+ K ++ L R
Sbjct: 386 CVVSKNNDDSQANLDR 401
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 91/176 (51%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
NIL++ LC+ GN++ A + +Q PN++++S L+ G+C + +A + M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ + D ++ I+I+GL K V+E LL M K + Y ++ GL +R+
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A +++++M G+ P+ ++Y ++ LC++ V +++++ G P +
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
++FN ++ L E +F K G+E + + L+ G C + A + +
Sbjct: 168 KSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDE 227
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
Q+ +V +++ +I G C +EA+ LL M ++I DTI +N LI GL K R
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ L+ M +G PN TY +L L A ++ ++ G++P+ +Y
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGY 216
++ GLC+ + + + + ++ G+
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V TF+ L+ C +G +EA + M K+ +EP+ ++++ L+ G V + D+
Sbjct: 237 VMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLE 296
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +G + +Y ++ GL K EA ++++M S + + Y ++ GLC+ +
Sbjct: 297 RMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Query: 130 RSFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRA 169
+ W L +NH +P ++ + + V+ K++ +A
Sbjct: 357 SVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQA 397
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ + TFNIL+ L K+G V+E ++ M +G EPN +Y ++ G K +AK
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
++ + M+ G+ SY ++ GLC+ K V E +L +M + + T+ +
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 121/217 (55%), Gaps = 12/217 (5%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I ++ T+N +++ALC++G++ + ++F + K G EP+++S+++L++ + + +
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I++ M + ++ +++SY + GL + K +A +L++ M ++ I D YN+LI
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI---- 181
+ K NEM +G+ P+ +TY L+ +LCK +DRA+ ++ E+ I
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAV----EVSEEAIKHKL 364
Query: 182 --QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+PNMY V + L G++ +A ++ ++ ++ Y
Sbjct: 365 LSRPNMYKPVV--ERLMGAGKIDEATQLVKNGKLQSY 399
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 9/240 (3%)
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK- 109
L+ GY + E A +F+ M + V+S+ +++ K +DEA E+ K
Sbjct: 130 LLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 110 KIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH---HV 166
I D + YN++I LC+ D + E+ G P++I++N LL+ +
Sbjct: 188 GITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG 247
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
DR L+K + + PN+ +Y + GL + + DA + + +G + +V TY+ +
Sbjct: 248 DRIWDLMK---SKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 227 IDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
I Y + +E + ++M+ G PD VTY ++I L KKG+ ++A ++ E + L
Sbjct: 305 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEV 61
L C + V++FN L+ A + EA F + ++ G+ P++V+Y++++ C +
Sbjct: 151 LNC-ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+ IF + + G D+ S+ ++ + ++ E + + M SK + + YNS
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ GL + ++ DA L++ M GI P+V TYN L+ ++++ + +++E+G+
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
P+ TY +L+ LCK G L A E+ ++ + Y +++ G DEA
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 242 LM 243
L+
Sbjct: 390 LV 391
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 110/206 (53%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ ++ T+N +++ C+ G+ + ++ A M ++G++PN S+ ++ G+ + ++
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M RGV V +Y I I LCK K EA +LL+ M S + +T+ Y+ LI G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C + +A KL M +RG P+ Y L+ LCK + A++L K+ E+ P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDI 211
L++GL K ++++A+E+ +
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELIGQV 388
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 123/246 (50%), Gaps = 7/246 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKA 64
I V++ N L+ A + KEAK V+ M K G+EP++ +Y+ ++ +C + +
Sbjct: 147 ISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSS 206
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
I M ++G+ + S+ ++I+G DE +L M + + YN I
Sbjct: 207 YSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQS 266
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LCK ++S +A L++ M G+ PN +TY+ L+ C + A L K + +G +P+
Sbjct: 267 LCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM---IDGYCKEGLFDEALI 241
Y L+ LCK G + A + ++ + K + V ++S+M ++G K+ +EA
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKNW---VPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 242 LMSKME 247
L+ +++
Sbjct: 384 LIGQVK 389
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 32 VFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQSYTIIINGL 90
VF + K + + S ++L+ + K+ +AK ++ M + G+ D+++Y +I
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 91 CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNV 150
C+ ++S++ EM K I ++ + +I G ++S + K++ M RG+ V
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
TYN + LCK A AL+ + G++PN TY+ L+ G C ++A+++F+
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
++ +G + Y +I CK G F+ AL L + +P ++ L K +
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSK 377
Query: 271 NEKAEKLL 278
E+A++L+
Sbjct: 378 VEEAKELI 385
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 6/177 (3%)
Query: 111 IIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC---KSHHVD 167
I D YN +I C+ + ++ +V EM +GI PN ++ ++ KS V
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 168 RAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
+ +A++K ++G+ + TY + + LCK + K+A+ + +L G N TYS +I
Sbjct: 243 KVLAMMK---DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 228 DGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
G+C E F+EA L M + GC PD+ Y +I L K G+ E A L +E + +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 9/211 (4%)
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNE---- 140
++I+G C + +DEA L EM T YN ++D +CKL R D +KL E
Sbjct: 250 LLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKV 309
Query: 141 ---MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
M RG+P N T+N L++ LCK + A+ L ++ E G QP+ TY VL+ L +
Sbjct: 310 LLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQ 369
Query: 198 VGRLKDAQEIFQDILIKGYN--LNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
R+ + E+ + GY LN + Y + C + A+ + M+++GC P
Sbjct: 370 AARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGI 429
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVARSL 286
TY +++ + + +A L +E + +
Sbjct: 430 KTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 15/224 (6%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
++L+ C + EA + M + G E +Y+ ++D C ++ + KD F +
Sbjct: 249 DLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVC---KLCRKKDPFKLQPE 305
Query: 74 ----------RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
RGV + +++ ++IN LCKI+ +EA +L M D Y LI
Sbjct: 306 VEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIR 365
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPP--NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
L + R + +++++M G N Y L +LC ++ A+++ K ++ G
Sbjct: 366 SLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGC 425
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
+P + TY +LM +C +L A ++++ KG ++ + Y V
Sbjct: 426 KPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDV 80
K G + A+ VF M + + +++S+++L+ Y L K+ + +++FN + + + D+
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDI 180
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL---CKLERSFDAWKL 137
SY +I LC+ + EA +LL+E+ +K + D + +N+L+ + E + W
Sbjct: 181 VSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWA- 239
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
+M + + ++ TYN L L + L +++ G++P+++++ ++ G
Sbjct: 240 --KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
G++ +A+ +++I+ GY + T+++++ CK G F+ A+ L + S + T
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTT 357
Query: 258 YGIIIRALFKKGENEKAEKLLR 279
++ L K + E+AE++++
Sbjct: 358 LQQLVDELVKGSKREEAEEIVK 379
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 120/258 (46%), Gaps = 7/258 (2%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
E + + M K+G I+S Y A+ +F M R V S+ ++
Sbjct: 98 EEQKKYRDMSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL 151
Query: 88 NGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
+ K D L NE+ K I D + YN+LI LC+ + +A L++E+ ++G+
Sbjct: 152 SAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL 211
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P+++T+N LL + + K+ E+ + ++ TY + GL + K+
Sbjct: 212 KPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+F ++ G +V +++ MI G EG DEA ++ G PD T+ +++ A+
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 267 KKGENEKAEKLLREMVAR 284
K G+ E A +L +E ++
Sbjct: 332 KAGDFESAIELFKETFSK 349
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 112/235 (47%), Gaps = 35/235 (14%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
I ++ ++N L++ALC++ ++ EA + + +GL+P+IV++++L+ L +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
++I+ MV++ V D+++Y + GL NE SK+++
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLA------------NEAKSKELV------------ 270
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L E+ G+ P+V ++N ++ +D A A K+I + G +P+
Sbjct: 271 -----------NLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
T+ +L+ +CK G + A E+F++ K Y + T ++D K +EA
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 71/138 (51%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + ++RT+N + L E KE N+F + GL+P++ S+++++ G +
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A+ + +V+ G D ++ +++ +CK + A L E SK+ +
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQ 360
Query: 121 LIDGLCKLERSFDAWKLV 138
L+D L K + +A ++V
Sbjct: 361 LVDELVKGSKREEAEEIV 378
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ V ++N +++A + N KEA +F M+ +G++P VS + + ++ + +
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I V+ G+ +V +I+ CK K VD A S+ ++ S+ +++ +N++I G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS----WNAMILGF 413
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCK---SHHVDRAIALIKKIEEQGIQ 182
+ R DA ++M R + P+ TY ++ + + +HH ++ + +
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR---SCLD 470
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
N++ T L+D K G + A+ IF D++ + + V T++ MIDGY G AL L
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIF-DMMSERH---VTTWNAMIDGYGTHGFGKAALEL 526
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKG 269
+M+ P+ VT+ +I A G
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSG 553
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 57/300 (19%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNI-VSYSSLMDGYCLVKEVNKA---------- 64
LV C+ G+V EA VF + ++ + V Y +++ G+ V +++KA
Sbjct: 75 LVSLFCRYGSVDEAARVF-----EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 65 -------------------------KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA 99
K+I +V+ G + D+ + T + N K + V+EA
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 100 WSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDV 159
+ + M + D + +N+++ G + + A ++V M + P+ IT +L
Sbjct: 190 RKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 160 LCKSHHVDRAIALIKKIE----EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG 215
+ R I++ K+I G + T L+D K G L+ A+++F +L +
Sbjct: 246 VSAL----RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER- 300
Query: 216 YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
NV +++ MID Y + EA+++ KM G P V+ + A G+ E+
Sbjct: 301 ---NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 131/316 (41%), Gaps = 47/316 (14%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ V F L++ E ++ K + ++VK G ++ + + L + Y ++VN+A+
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F+ M +R D+ S+ I+ G + M A ++ M + + I S++ +
Sbjct: 191 KVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAV 246
Query: 126 CKL--------------ERSFD---------------------AWKLVNEMNHRGIPPNV 150
L FD A +L + M R NV
Sbjct: 247 SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER----NV 302
Query: 151 ITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQD 210
+++N ++D ++ + A+ + +K+ ++G++P + + +G L+ + I +
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 211 ILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGE 270
+ G + NV + +I YCK D A + K++S V++ +I + G
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMILGFAQNGR 418
Query: 271 NEKAEKLLREMVARSL 286
A +M +R++
Sbjct: 419 PIDALNYFSQMRSRTV 434
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 28 EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIII 87
E +N + M K+G I++ Y V A+ +F+ M +R S+ ++
Sbjct: 95 EEQNKYPNMSKEGFVARIINL------YGRVGMFENAQKVFDEMPERNCKRTALSFNALL 148
Query: 88 NGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
N K D + E+ K I D YN+LI GLC +A L++E+ ++G+
Sbjct: 149 NACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL 208
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P+ IT+N LL + + ++ E+ ++ ++ +Y + GL + ++
Sbjct: 209 KPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS 268
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
+F + +V T++ MI G+ EG DEA+ ++E +GC P + ++ A+
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 267 KKGENEKAEKLLREMVARSL 286
K G+ E A +L +E+ A+ L
Sbjct: 329 KAGDLESAYELCKEIFAKRL 348
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 1/229 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMV-KQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+FN L+ A + +F + K +EP++ SY++L+ G C +A + +
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ +G+ D ++ I+++ +E + M K + D YN+ + GL +
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
S + L +++ + P+V T+ ++ +D AI K+IE+ G +P + +
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
L+ +CK G L+ A E+ ++I K ++ ++D K DEA
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 125/259 (48%), Gaps = 7/259 (2%)
Query: 24 GNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQS 82
G + A+ VF M ++ + +S+++L++ K+ + + IF + + + DV S
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID---GLCKLERSFDAWKLVN 139
Y +I GLC EA +L++E+ +K + D I +N L+ K E W +
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
E N + ++ +YN L L + + ++L K++ ++P+++T+T ++ G G
Sbjct: 240 EKN---VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEG 296
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYG 259
+L +A +++I G ++ ++ CK G + A L ++ + + D
Sbjct: 297 KLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQ 356
Query: 260 IIIRALFKKGENEKAEKLL 278
++ AL K + ++AE+++
Sbjct: 357 EVVDALVKGSKQDEAEEIV 375
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 101/204 (49%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ +V ++N L++ LC +G+ EA + + +GL+P+ ++++ L+ + + +
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
I+ MV++ V D++SY + GL +E SL +++ ++ D + ++I G
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ +A E+ G P +N LL +CK+ ++ A L K+I + + +
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDE 352
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQ 209
++D L K + +A+EI +
Sbjct: 353 AVLQEVVDALVKGSKQDEAEEIVE 376
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 141/280 (50%), Gaps = 6/280 (2%)
Query: 7 DAEVRTFNILVEAL--CKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
+ +T+ L + L CK+ + +A +F VM+ +GL+P I Y+SL+ Y + ++KA
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPD--QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKA 198
Query: 65 KDIFNFMVQ-RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+M DV ++T++I+ CK+ D S++ EM + T+ YN++ID
Sbjct: 199 FSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIID 258
Query: 124 GLCKLERSFDAWKLVNEMNHRGIP-PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
G K + ++ +M G P+V T N ++ ++ + + + + G+Q
Sbjct: 259 GYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQ 318
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P++ T+ +L+ K G K + + + ++L TY+++I+ + K G ++ +
Sbjct: 319 PDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDV 378
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
KM+ G P+++TY ++ A K G K + +LR++V
Sbjct: 379 FRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 126/264 (47%), Gaps = 5/264 (1%)
Query: 22 KEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDV 80
KE + A +F ++ KQ EP +Y+ L K+ ++A +F M+ G+ +
Sbjct: 120 KENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTI 179
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHS-KKIIADTICYNSLIDGLCKLERSFDAWK-LV 138
YT +I+ K +++D+A+S L M S D + LI CKL R FD K +V
Sbjct: 180 DVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR-FDLVKSIV 238
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ-PNMYTYTVLMDGLCK 197
EM++ G+ + +TYN ++D K+ + +++ + E G P++ T ++
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGN 298
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
++ + + + G ++ T++++I + K G++ + +M ME VT
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 258 YGIIIRALFKKGENEKAEKLLREM 281
Y I+I K G EK + + R+M
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKM 382
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 126/280 (45%), Gaps = 1/280 (0%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+V TF +L+ CK G K++ M G+ + V+Y++++DGY + + +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 68 FNFMVQRGVT-HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
M++ G + DV + II + + + S + + D +N LI
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K +++ M R +TYN +++ K+ +++ + +K++ QG++PN
Sbjct: 333 KAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSI 392
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY L++ K G + + + I+ L+ ++ +I+ Y + G L +M
Sbjct: 393 TYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
E C PD +T+ +I+ G + ++L ++M++ +
Sbjct: 453 EERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L + ++ TFNIL+ + K G K+ +V M K+ V+Y+ +++ + +
Sbjct: 314 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
K D+F M +GV + +Y ++N K +V + S+L ++ + ++ DT +N +I
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ + +L +M R P+ IT+ ++ K++ ++++E+Q I
Sbjct: 434 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMI----KTYTAHGIFDAVQELEKQMIS 489
Query: 183 PNM 185
++
Sbjct: 490 SDI 492
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 137/305 (44%), Gaps = 35/305 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN ++ G++ EA+++ M ++G+ P+ +Y+ L+ + ++ A + + +
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM---------HSKKIIA--------- 113
+ G+ D ++ +++ LC+ KMV E +++ EM HS +I
Sbjct: 402 RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Query: 114 ------------DTICYNSLIDGLCKLERSFDAWK-----LVNEMNHRGIPPNVITYNPL 156
D + ++ + + + W + N G +V+ YN +
Sbjct: 462 VQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ K+ ++A++L K ++ QG P+ TY L L V + +AQ I ++L G
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC 581
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+TY+ MI Y + GL +A+ L ME +G P+ V YG +I + G E+A +
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 277 LLREM 281
R M
Sbjct: 642 YFRMM 646
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 136/272 (50%), Gaps = 2/272 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN L++ K G + +A N+F+ M+K G+ + V++++++ +++A+ + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++G++ D ++Y I+++ ++ A ++ + DT+ + +++ LC+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ ++ EM+ I + + ++ + V +A AL ++ + + + T +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAV 485
Query: 192 MDGLCKVGRLKDAQEIFQDIL-IKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+D + G +A+ +F + G +V Y+VMI Y K L ++AL L M++ G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
PD TY + + L ++A+++L EM+
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V +N++++A K ++A ++F M QG P+ +Y+SL V V++A+ I
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M+ G ++Y +I ++ ++ +A L M + + + Y SLI+G +
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+A + M G+ N I L+ K ++ A + K+++ P++
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ +G + +A+ IF + KG +V +++ M+ Y G+ DEA+ + +M
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
SG + D ++ ++ G+ + +L EM+
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEML 786
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%)
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G +DV Y ++I K K+ ++A SL M ++ D YNSL L ++ +A
Sbjct: 510 GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEA 569
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+++ EM G P TY ++ + + A+ L + +E+ G++PN Y L++G
Sbjct: 570 QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
+ G +++A + F+ + G N + +I Y K G +EA + KM+ S PD
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 115 TICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH-HVDRAIALI 173
T +N+LID K R DA L +EM G+P + +T+N ++ C +H H+ A +L+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT-CGTHGHLSEAESLL 363
Query: 174 KKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
KK+EE+GI P+ TY +L+ G ++ A E ++ I G + T+ ++ C+
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
+ E ++++M+ + D + +I++ +G
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+T+ ++ + + G + +A +++ M K G++PN V Y SL++G+ V +A F
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRM 645
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + GV + T +I K+ ++EA + ++M + D NS++ L
Sbjct: 646 MEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGI 705
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+A + N + +G +VI++ ++ + +D AI + +++ E G+ + ++
Sbjct: 706 VSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 191 LMDGLCKVGRLKDAQEIFQDILI-KGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+M G+L + E+F ++L+ + L+ T+ + K G+ EA+
Sbjct: 765 VMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAV 815
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 116/296 (39%), Gaps = 34/296 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+NI++ AL + G E + + M G+ P +Y L+D Y V +A M
Sbjct: 148 YNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMG 207
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
QR D + ++ D A + K+ D +D + ++
Sbjct: 208 QRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLD-------LDSIDDFPKNG 260
Query: 133 DAWKLVN-------EMNHRGI--------------------PPNVITYNPLLDVLCKSHH 165
A VN E+ G P T+N L+D+ K+
Sbjct: 261 SAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
++ A L ++ + G+ + T+ ++ G L +A+ + + + KG + + +TY++
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
++ + G + AL K+ G PD VT+ ++ L ++ + E ++ EM
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM 436
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%)
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
Q PN+ Y +++ L + G+ + + + ++ G TY +++D Y K GL E
Sbjct: 139 QSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKE 198
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
AL+ + M PD VT ++R GE ++A++ +
Sbjct: 199 ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFK 239
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+N ++EAL + G EA +F + K+ P
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPP---------------------------- 343
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
R + ++ ++ +++NG C +EA + +M K DT+ +N+L++ LC E
Sbjct: 344 --RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELL 401
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A KL EM + + P+ TY L+D K +D A K + E ++PN+ Y L
Sbjct: 402 AEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRL 461
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
D L K G+L DA+ F D+++ ++ Y ++ + G DE L ++ +M
Sbjct: 462 QDQLIKAGKLDDAKSFF-DMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDT 520
Query: 252 IPDAVTYGIIIRALFKKGENE-KAEKLLRE 280
+ + ++ +KG E EKL+ E
Sbjct: 521 VRVSEELQEFVKEELRKGGREGDLEKLMEE 550
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 9/256 (3%)
Query: 41 LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAW 100
L P+I ++ L+ G + KA +I M +G D Y+ ++ G K D
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 101 SLLNEMHSK--KIIADTICYNSLIDGLCKLERSFDAWKLVNEM--NHRGIPPNVITYNPL 156
L E+ K + D + Y L+ G E +A + E + + + + YN +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQP-----NMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
L+ L ++ D A+ L ++++ P N+ T+ V+++G C G+ ++A E+F+ +
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
+ + +++ +++ C L EA L +ME PD TYG+++ FK+G+
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 272 EKAEKLLREMVARSLH 287
++ + MV +L
Sbjct: 437 DEGAAYYKTMVESNLR 452
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N ++ A ++ + + + G+ PNI++Y+ + Y V++ A + +
Sbjct: 132 TVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLF 191
Query: 72 VQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ + + ++ I++ GL +++A + +M K + D + Y+ L+ G K
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 131 SFDAWKLVNEMNHR--GIPPNVITYNPLLDVLCKSHHVDRAIALIKKI--EEQGIQPNMY 186
+ KL E+ + G + + Y L+ A+ ++ E ++ +
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYN------LNVRTYSVMIDGYCKEGLFDEAL 240
Y +++ L + G+ +A ++F D + K +N +N+ T++VM++GYC G F+EA+
Sbjct: 312 AYNYVLEALSENGKFDEALKLF-DAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAM 370
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ +M C PD +++ ++ L +AEKL EM +++
Sbjct: 371 EVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV 416
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 129/288 (44%), Gaps = 9/288 (3%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ + TF ILV+ L N+++A + M +G + V YS LM G + +
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 66 DIFNFMVQR--GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM--HSKKIIADTICYNSL 121
++ + ++ G D Y ++ G +M EA E + K+ + YN +
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPP-----NVITYNPLLDVLCKSHHVDRAIALIKKI 176
++ L + + +A KL + + PP N+ T+N +++ C + A+ + +++
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 177 EEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLF 236
+ P+ ++ LM+ LC L +A++++ ++ K + TY +++D KEG
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
DE M S P+ Y + L K G+ + A+ MV++
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V FNIL+ A C E +KEA+++F + + P++ + + L+ G+ +V + ++
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
MV+RG + +Y I I+G CK + EA L +M +LI G
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A +L +E++ RG+ P+ YN L+ L K V AI ++K++EE+GI+P+ T+
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 190 VLMDGLCKVGR--LKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ G+ K E +Q + + T +++ +C G + L L M
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 248 SSGCIPDAVTYGIIIRAL 265
G P ++ AL
Sbjct: 415 EKGYCPHGHALELLTTAL 432
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +V+T NIL+ + G+V + + MVK+G +PN V+Y +DG+C + +A
Sbjct: 206 FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEAL 265
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + VQ T +I+G + +A L +E+ + + D YN+L+ L
Sbjct: 266 RLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSL 325
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH--VDRAIALIKKIEEQGIQP 183
K A K++ EM +GI P+ +T++ + + KS + +K++E+ + P
Sbjct: 326 MKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVP 385
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL-IL 242
T +LM C G + ++++ +L KGY + ++ C ++A
Sbjct: 386 KTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECS 445
Query: 243 MSKMESSGCIPDAV 256
+E C+ + V
Sbjct: 446 WQTVERGRCVSEPV 459
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 47/234 (20%)
Query: 90 LCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL------ERSFDAW-KLVNEMN 142
L +++ D+AW+L+ E+ +K + + + S+ LCK+ E + +A+ K+ E+
Sbjct: 113 LARMRYFDQAWALMAEV--RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF 170
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLK 202
+ V +N LL C + A ++ +K+ + P++ T +L+ G + G +
Sbjct: 171 RKKF--GVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVT 227
Query: 203 DAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME--------------- 247
+ + +++ +G+ N TY + IDG+CK+ F EAL L M+
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLI 287
Query: 248 --------------------SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G PD Y ++ +L K G+ A K+++EM
Sbjct: 288 HGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 133/300 (44%), Gaps = 34/300 (11%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E TF ILV+ LCK G ++E + M + +P++ +Y++++ ++ + ++
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW 321
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M + + DV +Y ++ GLCK V+ + L EM K+I+ D Y LI+G
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVAD 381
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A L ++ G ++ YN ++ LC + VD+A L + E+ ++P+ T
Sbjct: 382 GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETL 441
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNL------------------------------ 218
+ +M + RL D + + I GY +
Sbjct: 442 SPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKT 501
Query: 219 ----NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKA 274
+V Y+++++ K G ++L L +M G PD+ +Y I I +KG+ + A
Sbjct: 502 KGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAA 561
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 124/275 (45%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
+N L + G+ + A + +M QG P+ + L+ + + + ++ M
Sbjct: 160 AYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKM 219
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G V Y I++ L K D A ++ + ++ ++ + L+ GLCK R
Sbjct: 220 KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRI 279
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ +++ M P+V Y ++ L ++D ++ + ++ I+P++ Y L
Sbjct: 280 EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTL 339
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ GLCK GR++ E+F ++ K ++ Y V+I+G+ +G A L + SG
Sbjct: 340 VVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGY 399
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
I D Y +I+ L + +KA KL + + L
Sbjct: 400 IADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 6/236 (2%)
Query: 32 VFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLC 91
V+ M K G +P + Y+ +MD + A ++ + G+ + ++ I++ GLC
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 92 KIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---LERSFDAWKLVNEMNHRGIPP 148
K ++E +L M D Y ++I L L+ S W +EM I P
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW---DEMRRDEIKP 331
Query: 149 NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
+V+ Y L+ LCK V+R L +++ + I + Y VL++G G+++ A ++
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+D++ GY ++ Y+ +I G C D+A L PD T I+ A
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVA 447
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 126/280 (45%), Gaps = 11/280 (3%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I +V + LV LCK+G V+ +F M + + + Y L++G+ +V A
Sbjct: 329 IKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSAC 388
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+++ +V G D+ Y +I GLC + VD+A+ L +++ D + ++
Sbjct: 389 NLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAY 448
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITY-NPLLDVLCKSHHVDRAIAL----IKKIEEQG 180
+ R D ++ + G P V Y +LC + A+AL I K + G
Sbjct: 449 VVMNRLSDFSNVLERIGELGYP--VSDYLTQFFKLLCADEEKN-AMALDVFYILKTKGHG 505
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
++ Y +LM+ L K+G ++ + +F ++ G+ + +YS+ I + ++G A
Sbjct: 506 ---SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAAC 562
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
K+ C+P Y + + L + GE + L+RE
Sbjct: 563 SFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
V +NIL+EAL K G+++++ ++F M K G EP+ SYS + + +V A
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+++ + +Y + GLC+I +D L+ E C ++ G
Sbjct: 565 HEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE-----------CLGNVESG--- 610
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
P Y + +CK + ++ + ++ ++ ++G+ N
Sbjct: 611 --------------------PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVI 650
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDI 211
Y ++ G+ K G +K A+E+F ++
Sbjct: 651 YCAIISGMSKHGTIKVAREVFTEL 674
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
+PN+V+Y+ L+ + +V++ +F + V+ DV ++ +++ K M+ E +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
+L M S + D I +N LID K + + + P + T+N ++
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYT--VLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
K+ +D+A + KK+ + P+ TY ++M G C G + A+EIF+++ L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
T + M++ YC+ GL+ EA L + PDA TY + +A K E+ + L++
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 280 EM 281
+M
Sbjct: 443 KM 444
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 112 IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA 171
I D Y+ LI + K ++ A L +EM + G P+ YN L + H D+A A
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNAL--ITAHLHTRDKAKA 187
Query: 172 L---------IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT 222
L +K IE QPN+ TY +L+ + G++ +F+D+ + + +V T
Sbjct: 188 LEKVRGYLDKMKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 223 YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
++ ++D Y K G+ E ++++M S+ C PD +T+ ++I + KK E EK E+ + ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 66 DIFNFMV-QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
++F +M QR D Y+ +I+ + K A L +EM + D YN+LI
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 125 LCKLERSFDAWKLVNEM--NHRGIP---PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
A + V +GI PNV+TYN LL +S VD+ AL K ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+ P++YT+ +MD K G +K+ + + + ++ T++V+ID Y K+ F++
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ S P T+ +I K +KAE + ++M
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 37/253 (14%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
+ + +V TFN +++A K G +KE + V M +P+I++++ L+D Y +E
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA-WSLLNEMHSKKIIADTICYNSL 121
K + F +++ + ++ +I K +M+D+A W
Sbjct: 296 KMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW--------------------- 334
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+K +N+MN+ P+ ITY ++ + V RA + +++ E
Sbjct: 335 ------------VFKKMNDMNY---IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
T +++ C+ G +A ++F + + + TY + Y K + ++ I
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 242 LMSKMESSGCIPD 254
LM KME G +P+
Sbjct: 440 LMKKMEKDGIVPN 452
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 118/242 (48%), Gaps = 4/242 (1%)
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWS 101
+PN+V+Y+ L+ + +V++ +F + V+ DV ++ +++ K M+ E +
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
+L M S + D I +N LID K + + + P + T+N ++
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYT--VLMDGLCKVGRLKDAQEIFQDILIKGYNLN 219
K+ +D+A + KK+ + P+ TY ++M G C G + A+EIF+++ L
Sbjct: 325 KARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLK 382
Query: 220 VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
T + M++ YC+ GL+ EA L + PDA TY + +A K E+ + L++
Sbjct: 383 ASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMK 442
Query: 280 EM 281
+M
Sbjct: 443 KM 444
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 13/180 (7%)
Query: 112 IADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIA 171
I D Y+ LI + K ++ A L +EM + G P+ YN L + H D+A A
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNAL--ITAHLHTRDKAKA 187
Query: 172 L---------IKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT 222
L +K IE QPN+ TY +L+ + G++ +F+D+ + + +V T
Sbjct: 188 LEKVRGYLDKMKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 223 YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
++ ++D Y K G+ E ++++M S+ C PD +T+ ++I + KK E EK E+ + ++
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 66 DIFNFMV-QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
++F +M QR D Y+ +I+ + K A L +EM + D YN+LI
Sbjct: 118 EVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITA 177
Query: 125 LCKLERSFDAWKLVNEM--NHRGIP---PNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
A + V +GI PNV+TYN LL +S VD+ AL K ++
Sbjct: 178 HLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMS 237
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
+ P++YT+ +MD K G +K+ + + + ++ T++V+ID Y K+ F++
Sbjct: 238 PVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKM 297
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ S P T+ +I K +KAE + ++M
Sbjct: 298 EQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKM 339
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 37/253 (14%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
+ + +V TFN +++A K G +KE + V M +P+I++++ L+D Y +E
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEA-WSLLNEMHSKKIIADTICYNSL 121
K + F +++ + ++ +I K +M+D+A W
Sbjct: 296 KMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEW--------------------- 334
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+K +N+MN+ P+ ITY ++ + V RA + +++ E
Sbjct: 335 ------------VFKKMNDMNY---IPSFITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
T +++ C+ G +A ++F + + + TY + Y K + ++ I
Sbjct: 380 VLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQI 439
Query: 242 LMSKMESSGCIPD 254
LM KME G +P+
Sbjct: 440 LMKKMEKDGIVPN 452
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 141/272 (51%), Gaps = 29/272 (10%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGL-EPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
L+ LCK G + EA+ +F GL E ++V+++ ++ GY + ++ +A+++F+ + R
Sbjct: 52 LIGELCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR 106
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
+V ++T +++G + K + A L EM + +++ +N++IDG + R A
Sbjct: 107 ---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSGRIDKA 159
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
+L +EM R N++++N ++ L + +D A+ L +++ + + ++T ++DG
Sbjct: 160 LELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDG 211
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
L K G++ +A+ +F + + N+ +++ MI GY + DEA L M D
Sbjct: 212 LAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPER----D 263
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
++ +I + E KA L M +++
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNV 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 135/275 (49%), Gaps = 15/275 (5%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V ++ +V+ L K G V EA+ +F M E NI+S+++++ GY +++A +F
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M +R D S+ +I G + + +++A L + M K +I+ + ++I G +
Sbjct: 257 QVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS----WTTMITGYVEN 308
Query: 129 ERSFDAWKLVNEMNHRG-IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
+ + +A + ++M G + PNV TY +L + + + I + Q N
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ L++ K G L A+++F + L+ +L +++ MI Y G EA+ + ++M
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQRDL--ISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G P AVTY ++ A G EK + +++V
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLV 461
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 128/256 (50%), Gaps = 25/256 (9%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ +V + + A+ +F M E N+VS+++++DGY ++KA ++F+
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +R + S+ ++ L + +DEA +L M + D + + +++DGL K
Sbjct: 165 EMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNG 216
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ +A +L + M R N+I++N ++ +++ +D A L + + E+ + ++
Sbjct: 217 KVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWN 268
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ G + + A +F + K NV +++ MI GY + +EAL + SKM
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 250 GCI-PDAVTYGIIIRA 264
G + P+ TY I+ A
Sbjct: 325 GSVKPNVGTYVSILSA 340
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 36/186 (19%)
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+RS + LV + P V L+ LCK + A L + E+ + T+
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTW 80
Query: 189 TVLMDGLCKVGRLKDAQEIFQDI-----------LIKGY-----------------NLNV 220
T ++ G K+G +++A+E+F + ++ GY NV
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV 140
Query: 221 RTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+++ MIDGY + G D+AL L +M + V++ +++AL ++G ++A L
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 281 MVARSL 286
M R +
Sbjct: 197 MPRRDV 202
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 74/307 (24%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ + + +A +F M E N++S+++++ GY KE +A ++F+ M
Sbjct: 266 SWNTMITGFIRNREMNKACGLFDRMP----EKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 72 VQRG-VTHDVQSYTIIIN------GLCKIKMVDEAWS-------------LLNEMHSK-- 109
++ G V +V +Y I++ GL + + + + S LLN M+SK
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN-MYSKSG 380
Query: 110 KIIA-------------DTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
++IA D I +NS+I +A ++ N+M G P+ +TY L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 157 LDVLCKSHHVDRAIALIKK-IEEQGIQPNMYTYTVLMDGLCKVGRLKD------------ 203
L + V++ + K + ++ + YT L+D + GRLKD
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARL 500
Query: 204 --------------------AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
A+E+ + +L G + + TY +M + Y G +EA +
Sbjct: 501 SRSFYGAILSACNVHNEVSIAKEVVKKVLETGSD-DAGTYVLMSNIYAANGKREEAAEMR 559
Query: 244 SKMESSG 250
KM+ G
Sbjct: 560 MKMKEKG 566
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM----VQRGVT 77
K G K+A + F M G + ++ S+++ + +++ I+ F+ + G+
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHT---IWEFLHDAPSKYGID 174
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
D S+ I I C++ ++D A+ + EM + D + Y +LI L K ER L
Sbjct: 175 IDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGL 234
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCK 197
N M +G PN+ T+N + L A L+ + + ++P+ TY +++ G
Sbjct: 235 WNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFF- 293
Query: 198 VGRLKD-AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAV 256
+ R D A+ ++ + KGY N++ Y MI CK G FD A + P+
Sbjct: 294 LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLD 353
Query: 257 TYGIIIRALFKKGENEKAEKLLREMVAR 284
T ++++ L KKG+ ++A+ ++ E+V R
Sbjct: 354 TVEMLLKGLVKKGQLDQAKSIM-ELVHR 380
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 2/205 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
ID + +FNI +++ C+ G + A M K GL P++V+Y++L+ +
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++N MV +G ++ ++ + I L + +A LL M ++ D+I YN +I G
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 126 CKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
L R D A ++ M+ +G PN+ Y ++ LCK+ + D A + K + PN
Sbjct: 293 F-LARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQ 209
+ T +L+ GL K G+L A+ I +
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MVL+ + TFN+ ++ L +A ++ +M K +EP+ ++Y+ ++ G+ L +
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A+ ++ M +G +++ Y +I+ LCK D A+++ + KK +
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEM 357
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPP 148
L+ GL K + D K + E+ HR +PP
Sbjct: 358 LLKGLVK-KGQLDQAKSIMELVHRRVPP 384
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ +V T+ L+ AL K ++ +MV +G +PN+ +++ + + A
Sbjct: 208 LTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDAN 267
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
D+ M + V D +Y ++I G + D A + MH K + Y ++I L
Sbjct: 268 DLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYL 327
Query: 126 CKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
CK +FD A+ + + + PN+ T LL L K +D+A ++++ + +
Sbjct: 328 CK-AGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 131/263 (49%), Gaps = 13/263 (4%)
Query: 27 KEAKNVFAVMVKQ-GLEPNIVSYSSL--MDGYCLVKEVNKAKDIFNFMVQRG--VTHDVQ 81
+ A VF ++ +Q +PN+ Y L M G C K+ KA ++F M+ G V H+V
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKC--KQPEKAHELFQEMINEGCVVNHEV- 187
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLERSFDAWK-LVN 139
YT +++ + D A++LL M S D Y+ LI ++ +FD + L++
Sbjct: 188 -YTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQV-FAFDKVQDLLS 245
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSH-HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
+M +GI PN ITYN L+D K+ V+ LI+ + E +P+ +T +
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGN 305
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
G+++ + ++ G N+RT+++++D Y K G + + +M M+ VTY
Sbjct: 306 GQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTY 365
Query: 259 GIIIRALFKKGENEKAEKLLREM 281
++I A + G+ ++ E L R M
Sbjct: 366 NVVIDAFGRAGDLKQMEYLFRLM 388
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 24/294 (8%)
Query: 7 DAEVRTFNILVEALCKEGNV----------------KEAKNVFAVMVKQGLEPNIVSYSS 50
++ ++ F +L E L + NV ++A +F M+ +G N Y++
Sbjct: 131 ESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTA 190
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTH----DVQSYTIIINGLCKIKMVDEAWSLLNEM 106
L+ Y + A F + + +H DV +Y+I+I ++ D+ LL++M
Sbjct: 191 LVSAYSRSGRFDAA---FTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDM 247
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFD-AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
+ I +TI YN+LID K + + L+ + P+ T N L +
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV 225
++ +K + GI+PN+ T+ +L+D K G K + + + Y+ + TY+V
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 226 MIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
+ID + + G + L M+S P VT ++RA + + +K +LR
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ +RTFNIL+++ K GN K+ V M K IV+Y+ ++D + ++ + +
Sbjct: 323 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+F M + + ++ + D+ +L + + I D + +N L+D
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
++E+ + ++ M +G P+ ITY ++
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK--- 65
+V T++IL+++ + + +++ + M +QG+ PN ++Y++L+D Y KAK
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY------GKAKMFV 273
Query: 66 DIFNFMVQRGVTHDVQSYTIIIN-------GLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
++ + ++Q D + + +N G +I+M++ + + S I + +
Sbjct: 274 EMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY---EKFQSSGIEPNIRTF 330
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
N L+D K ++ M ++TYN ++D ++ + + L + ++
Sbjct: 331 NILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQS 390
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ I P+ T L+ + + + + I L++ ++ ++D Y + F E
Sbjct: 391 ERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAE 450
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRA 264
++ ME G PD +TY +++A
Sbjct: 451 MKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 108 SKKIIADTICYNSLIDGLCKL--ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH 165
SKK++ T+ SL + + L E + ++L+ E PNV Y L+ +L K
Sbjct: 109 SKKLLPRTVL-ESLHERITALRWESAIQVFELLRE--QLWYKPNVGIYVKLIVMLGKCKQ 165
Query: 166 VDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN--LNVRTY 223
++A L +++ +G N YT L+ + GR DA + + +N +V TY
Sbjct: 166 PEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRF-DAAFTLLERMKSSHNCQPDVHTY 224
Query: 224 SVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFK 267
S++I + + FD+ L+S M G P+ +TY +I A K
Sbjct: 225 SILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGK 268
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 117/209 (55%), Gaps = 5/209 (2%)
Query: 79 DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV 138
+V++ I++ + + DEA +L + + ADT+ YN +I A L+
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
EM+ G+ P+VITY +++ C + +D A L K++ + N TY+ +++G+CK
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 199 GRLKDAQEIFQDILIK-GYNL---NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
G ++ A E+ ++ + G L N TY+++I +C++ +EAL+++ +M + GC+P+
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 255 AVTYGIIIRALFKKGENEKA-EKLLREMV 282
VT ++I+ + + E+ KA KL+ ++V
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLV 337
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
V D +Y ++I ++ A L+ EM + D I Y S+I+G C + DAW
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG----IQPNMYTYTVL 191
+L EM+ N +TY+ +L+ +CKS ++RA+ L+ ++E++ I PN TYT++
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI-LMSKMESSG 250
+ C+ R+++A + + +G N T V+I G + +AL L+ K+ G
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ + + +L + E+AEK+ R M+ R +
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVR 377
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 145/321 (45%), Gaps = 44/321 (13%)
Query: 10 VRTFNILVEALCKEGNVK-EAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V+T I++ LC + N+ EA V + + + V+Y+ ++ + ++N A +
Sbjct: 130 VKTMRIVL-TLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G+ DV +YT +ING C +D+AW L EM + +++ Y+ +++G+CK
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 129 ERSFDAWKLVNEMNHRG----IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
A +L+ EM I PN +TY ++ C+ V+ A+ ++ ++ +G PN
Sbjct: 249 GDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPN 308
Query: 185 MYTYTVLMDG-----------------LCKVG-------------------RLKDAQEIF 208
T VL+ G L K+G R ++A++IF
Sbjct: 309 RVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG--CIPDAVTYGIIIRALF 266
+ +L++G + S + C + + +L ++E D+ + +++ L
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 267 KKGENEKAEKLLREMVARSLH 287
++G + +A KL + M+ + +
Sbjct: 429 QQGNSWEAAKLAKSMLDKKMR 449
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 121/252 (48%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQ 81
+EGN++ V A M K L+ ++++G+ + +A ++ + ++
Sbjct: 330 REGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQV 389
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM 141
+Y I IN C+++ ++A L +EM K + Y++++D K R DA +L+ +M
Sbjct: 390 TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM 449
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
RG PN+ YN L+D+ ++ + RA + K+++ + P+ +YT ++ + L
Sbjct: 450 KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKEL 509
Query: 202 KDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
+ E++Q+ + ++ +M+ + K DE + L+ M+ G DA Y
Sbjct: 510 ERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSA 569
Query: 262 IRALFKKGENEK 273
+ AL G N +
Sbjct: 570 LNALRDAGLNSQ 581
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+V K+ EA V+ +K+ E V+Y+ ++ YC +++ NKA+ +F+ MV++G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---LERSF 132
V +Y+ I++ K + + +A L+ +M + + YNSLID + L R+
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
WK EM + P+ ++Y ++ +S ++R + L ++ + + +++
Sbjct: 479 KIWK---EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMV 535
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
K R+ + + QD+ ++G L+ R YS ++ GL
Sbjct: 536 GVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGL 578
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 39/281 (13%)
Query: 40 GLEPNIVSYSSLMDGYCLVKEVNKAKDIFN-FMVQRGVTHDVQS---YTIIINGLCKIKM 95
G+EP+ Y +M+ + + E +K ++F F QR +S YTI+ + L K
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGR 263
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPN------ 149
EA +L EM K I + Y+ LI + KL E + + +
Sbjct: 264 AFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLK 323
Query: 150 -VITY------NPLLDVLCKSHHVD------------------RAIALIKKIEEQGI--- 181
V+ Y L+V+ + R A K+ E +
Sbjct: 324 VVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 383
Query: 182 -QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
+ TY + ++ C++ + A+ +F +++ KG++ V YS ++D Y K +A+
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
LM+KM+ GC P+ Y +I + + +AEK+ +EM
Sbjct: 444 RLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/269 (19%), Positives = 113/269 (42%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ I+ +L K G EA V M +G+ + YS L+ + +EV + +F
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ + D + ++ + ++ ++ M ++ ++++G K
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFA 370
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A K+ +TY ++ C+ ++A L ++ ++G + Y+ +M
Sbjct: 371 EAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIM 430
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D K RL DA + + +G N+ Y+ +ID + + A + +M+ + +
Sbjct: 431 DMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVL 490
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD V+Y +I A + E E+ +L +E
Sbjct: 491 PDKVSYTSMISAYNRSKELERCVELYQEF 519
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 9/260 (3%)
Query: 22 KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQ 81
KEG E + + +++ GLE N+ +SL+ Y ++ ++ +FN M R ++
Sbjct: 102 KEG-FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLS 156
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEM 141
S+ I++ K+ VD+A LL+EM + D + +NSL+ G S DA ++ M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 142 NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRL 201
G+ P+ + + LL + + H+ A+ I + ++Y T L+D K G L
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 202 KDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGII 261
A+ +F + K N+ ++ ++ G L +A LM +ME G PDA+T+ +
Sbjct: 277 PYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 262 IRALFKKGENEKAEKLLREM 281
G+ EKA ++ +M
Sbjct: 333 ASGYATLGKPEKALDVIGKM 352
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 141/319 (44%), Gaps = 43/319 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + + + + L++A+ + G++K K + +++ L ++ ++L+D Y
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A+ +F+ M + + ++ +++GL ++ +A +L+ M + I D I +NS
Sbjct: 276 LPYARMVFDMMDAKNIV----AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L G L + A ++ +M +G+ PNV+++ + K+ + A+ + K++E+G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 181 IQPN-----------------------------------MYTYTVLMDGLCKVGRLKDAQ 205
+ PN Y T L+D K G L+ A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 206 EIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRAL 265
EIF I N ++ +++ M+ GY G +E + S M +G PDA+T+ ++
Sbjct: 452 EIFWGI----KNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 507
Query: 266 FKKGENEKAEKLLREMVAR 284
G ++ K M +R
Sbjct: 508 KNSGLVQEGWKYFDLMRSR 526
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + ++N ++ + K G V +A + M GL+P+IV+++SL+ GY A
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ M G+ S + ++ + + + ++ + ++ D +LID
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K A + + M+ + N++ +N L+ L + + A AL+ ++E++GI+P+
Sbjct: 272 KTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 327
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T+ L G +G+ + A ++ + KG NV +++ + G K G F AL + KM
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 247 ESSGCIPDAVTYGIIIRAL 265
+ G P+A T +++ L
Sbjct: 388 QEEGVGPNAATMSTLLKIL 406
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 115/271 (42%), Gaps = 26/271 (9%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
+ I + T+N L G ++A +V M ++G+ PN+VS++++ G
Sbjct: 320 EGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS----KKIIADTICYN 119
A +F M + GV + + + ++ L + ++ E+H K +I D
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG----KEVHGFCLRKNLICDAYVAT 435
Query: 120 SLIDGLCK---LERSFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
+L+D K L+ + + W + N+ ++ ++N +L + IA
Sbjct: 436 ALVDMYGKSGDLQSAIEIFWGIKNK--------SLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL--NVRTYSVMIDGYCKE 233
+ E G++P+ T+T ++ +CK L + D++ Y + + S M+D +
Sbjct: 488 MLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
G DEA + M PDA +G + +
Sbjct: 547 GYLDEAWDFIQTMSLK---PDATIWGAFLSS 574
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 71/116 (61%)
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
A+ + ++E GI P++ YT L+DG G L A+E+F+++ +KG NV TY+ MI
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 229 GYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
G C G F EA L+ +MES GC P+ V Y ++ L K G+ +A K+++EMV +
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 66/110 (60%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
M + G++P+++ Y++L+DGY + E++KAK++F M +G +V +Y +I GLC
Sbjct: 715 MKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 774
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
EA LL EM S+ + + Y++L+ L K + +A K++ EM +G
Sbjct: 775 FREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 99 AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
A + LN M I + Y +LIDG A ++ EM +G PNV TYN ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
LC + A L+K++E +G PN Y+ L+ L K G+L +A+++ ++++ KG+ +
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Query: 219 NV 220
++
Sbjct: 828 HL 829
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K + A +N M GI P+V+ Y L+D S +D+A + +++ +G PN++
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
TY ++ GLC G ++A + +++ +G N N YS ++ K G EA ++ +M
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 247 ESSG 250
G
Sbjct: 821 VKKG 824
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%)
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A N M + G+ V YT +I+G +D+A + EM K + + YNS+I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
GLC +A L+ EM RG PN + Y+ L+ L K+ + A +IK++ ++G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 116/236 (49%), Gaps = 1/236 (0%)
Query: 44 NIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSL 102
+ S ++L+ + K+ +A ++ M + G+ D+++Y +I LC+ ++S+
Sbjct: 145 TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 103 LNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCK 162
+ EM K I + +IDG K E+ + K++ M+ G+ V TYN ++ LCK
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCK 264
Query: 163 SHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT 222
A ALI + ++PN TY++L+ G C L +A +F+ ++ GY +
Sbjct: 265 RKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSEC 324
Query: 223 YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
Y +I CK G F+ ALIL + +P ++ L + + ++A++L+
Sbjct: 325 YFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 106/202 (52%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ ++ T+N ++ LC+ G+ + ++ A M ++ ++P S+ ++DG+ ++ ++ +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ M + GV V +Y I+I LCK K EA +L++ + S ++ +++ Y+ LI G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
C E +A L M G P+ Y L+ LCK + A+ L ++ E+ P+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 186 YTYTVLMDGLCKVGRLKDAQEI 207
L++GL ++ +A+E+
Sbjct: 358 SVMKWLVNGLASRSKVDEAKEL 379
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYS-SLMDGYCLVKEVNKAKDIFNFM 71
F++ V L +E + + ++ +P S++ + Y ++++ F +
Sbjct: 78 FSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNL 137
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLER 130
Q + V+S ++ K EA + EM I D YN +I LC+
Sbjct: 138 EQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGS 197
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ ++ +V EM + I P ++ ++D K D +++ ++E G+ + TY +
Sbjct: 198 TSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNI 257
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
++ LCK + +A+ + ++ N TYS++I G+C E DEA+ L M +G
Sbjct: 258 MIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
PD+ Y +I L K G+ E A L RE
Sbjct: 318 YKPDSECYFTLIHCLCKGGDFETALILCRE 347
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 115/238 (48%), Gaps = 7/238 (2%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKA 64
I V++ N L+ A + KEA V+ M K G+EP++ +Y+ ++ C + +
Sbjct: 142 IPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSS 201
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
I M ++ + S+ ++I+G K + DE ++ M + YN +I
Sbjct: 202 YSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQC 261
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
LCK ++S +A L++ + + PN +TY+ L+ C ++D A+ L + + G +P+
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM---IDGYCKEGLFDEA 239
Y L+ LCK G + A + ++ + K + V ++SVM ++G DEA
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCRESMEKNW---VPSFSVMKWLVNGLASRSKVDEA 376
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + I +F ++++ KE E + V +M + G+ + +Y+ ++ C K+
Sbjct: 208 MERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKK 267
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+AK + + ++ + + +Y+++I+G C + +DEA +L M D+ CY +
Sbjct: 268 SAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFT 327
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
LI LCK A L E + P+ L++ L VD A LI ++E+
Sbjct: 328 LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 137/310 (44%), Gaps = 36/310 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF--- 68
TF I+ + V+EA + + + L + S+ +L+D C K V +A+++
Sbjct: 119 TFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGK 177
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
N + + + + +I+ G K+ + +M ++ + D Y+ +D +CK
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKS 237
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ + A KL EM R + +V+ YN ++ + S V+ I + +++ E+G +PN+ T+
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 189 TVLMDGLCKVGRLKDAQE--------------------------------IFQDILIKGY 216
++ LC+ GR++DA +F ++ G
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGV 357
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ TY +++ + + G L + M+ SG PD+ Y +I AL +KG + A +
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 277 LLREMVARSL 286
EM+ R L
Sbjct: 418 YEEEMIERGL 427
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 3/246 (1%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
+ + N+++ K G + K + M +G+ ++ SYS MD C + KA +
Sbjct: 187 SNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKL 246
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
+ M R + DV +Y +I + + V+ + EM + + +N++I LC+
Sbjct: 247 YKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R DA+++++EM RG P+ ITY L L K + ++L ++ G++P M T
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDT 363
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y +LM + G L+ +++ + G + Y+ +ID ++G+ D A +M
Sbjct: 364 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMI 423
Query: 248 SSGCIP 253
G P
Sbjct: 424 ERGLSP 429
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 109/221 (49%), Gaps = 3/221 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + + ++ +++I ++ +CK G +A ++ M + ++ ++V+Y++++ +
Sbjct: 215 MDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQG 274
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +F M +RG +V ++ II LC+ + +A+ +L+EM + D+I Y
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMC 334
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
L +LE+ + L M G+ P + TY L+ + + + + K ++E G
Sbjct: 335 L---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
P+ Y ++D L + G L A+E ++++ +G + R
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRR 432
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 119/272 (43%), Gaps = 47/272 (17%)
Query: 56 CLVKEVNKAKDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIA 113
C + KA + FN++ + G H +++ +I+ L K + +W+L+N M + + +
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 114 DTICYNSLIDGLCK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI 170
+ + + + ++ + DA+ +++ N R + ++ L+D LC+ HV A
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR----DETSFYNLVDALCEHKHVVEAE 171
Query: 171 AL--------------------------------------IKKIEEQGIQPNMYTYTVLM 192
L KK++ +G+ ++++Y++ M
Sbjct: 172 ELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYM 231
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
D +CK G+ A ++++++ + L+V Y+ +I + + + +M GC
Sbjct: 232 DIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCE 291
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P+ T+ II+ L + G A ++L EM R
Sbjct: 292 PNVATHNTIIKLLCEDGRMRDAYRMLDEMPKR 323
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 140/316 (44%), Gaps = 36/316 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L C + RT+NIL+ K +++ A F M GL+P+ VSY +L+ + +
Sbjct: 359 MKLHCA-PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A+ + M V D + + + + +M++++WS H ++ Y++
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSA 476
Query: 121 LIDG------LCKLERSF----------------------------DAWKLVNEMNHRGI 146
ID L + ER F A +L M G+
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQE 206
P+ TYN L+ +L + + ++K+ E G + Y ++ K+G+L A+E
Sbjct: 537 TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEE 596
Query: 207 IFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
++++++ +V Y V+I+ + G +A+ + M+ +G ++V Y +I+
Sbjct: 597 VYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYT 656
Query: 267 KKGENEKAEKLLREMV 282
K G ++AE + R+++
Sbjct: 657 KVGYLDEAEAIYRKLL 672
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 133/289 (46%), Gaps = 7/289 (2%)
Query: 5 CIDAEVRT---FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
C + RT +N++++A + ++A +F M+ G+ P+ +Y++L+
Sbjct: 497 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 556
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+K + M + G D Y +I+ K+ ++ A + EM I D + Y L
Sbjct: 557 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 616
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE--- 178
I+ A V M GIP N + YN L+ + K ++D A A+ +K+ +
Sbjct: 617 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ P++YT +++ + ++ A+ IF + +G N T+++M+ Y K G F+E
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEE 735
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
A + +M + D ++Y ++ G ++A + +EMV+ +
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 138/278 (49%), Gaps = 4/278 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N LV+ L + + M + G + + Y +++ + + ++N A++++ M
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK---L 128
V+ + DV Y ++IN V +A S + M I +++ YNSLI K L
Sbjct: 602 VEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYL 661
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ + ++ + + ++ P+V T N ++++ + V +A A+ ++++G + N +T+
Sbjct: 662 DEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTF 720
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+++ K GR ++A +I + + + +Y+ ++ + +G F EA+ +M S
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
SG PD T+ + L K G ++KA + + E+ + +
Sbjct: 781 SGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N +++ K G +KEA F M+++G+ P V++++++ Y ++ + + M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ D ++Y I+I+ K ++ A + EM + D + Y +L+
Sbjct: 360 -KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT--YT 189
+A L+ EM+ + + T + L + ++ ++++ + K+ G NM + Y+
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG---NMSSEGYS 475
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT---YSVMIDGYCKEGLFDEALILMSKM 246
+D + G L +A+ +F I +N RT Y+VMI Y ++A L M
Sbjct: 476 ANIDAYGERGYLSEAERVF----ICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 247 ESSGCIPDAVTYGIIIRAL 265
S G PD TY +++ L
Sbjct: 532 MSYGVTPDKCTYNTLVQIL 550
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
Query: 63 KAKDIFNFMVQRGVTH-DVQSYTI---IINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
+A +IF + +G +V Y I I+ CK + V W +EM K I Y
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLW---DEMIRKGIKPINSTY 225
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE- 177
+LID K A + +M+ G+ P+ +T +L + K+ +A KK
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 178 -----EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
+ + + YTY ++D K G++K+A E F+ +L +G T++ MI Y
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G E LM M+ C PD TY I+I K + E+A +EM
Sbjct: 346 NGQLGEVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEM 393
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 8/234 (3%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV I+ +V + +L+ A GNV++A + M + G+ N V Y+SL+ Y V
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 61 VNKAKDIFNFMVQ---RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTIC 117
+++A+ I+ ++Q + DV + +IN + MV +A ++ + M + A+
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFT 719
Query: 118 YNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
+ ++ K R +A ++ +M I + ++YN +L + A+ K++
Sbjct: 720 FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMV 779
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDA----QEIFQDILIKGYNLNVRTYSVMI 227
GIQP+ T+ L L K+G K A +EI + + +G L + T S ++
Sbjct: 780 SSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLV 833
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 116/278 (41%), Gaps = 32/278 (11%)
Query: 5 CIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKA 64
C + V +NI++ L K + ++++ M+++G++P +Y +L+D Y A
Sbjct: 182 CYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHA 241
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT-ICYNSLID 123
M + G+ D + I++ K + +A + + AD+ +C +S
Sbjct: 242 LCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSY-- 299
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
TYN ++D KS + A K++ E+GI P
Sbjct: 300 ----------------------------TYNTMIDTYGKSGQIKEASETFKRMLEEGIVP 331
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
T+ ++ G+L + + + + + + RTY+++I + K + A
Sbjct: 332 TTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC-APDTRTYNILISLHTKNNDIERAGAYF 390
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+M+ G PD V+Y ++ A + E+AE L+ EM
Sbjct: 391 KEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 86 IINGLCKIKMVDEAWS---LLNEMHSK---KIIADTICYNSLIDGLCKLERSFDA---WK 136
II+G + D + L++E+H+K K ++ C ++++ L +E DA W
Sbjct: 90 IIDGFVDKRSKDARFGGNGLVSEVHTKCSTKRLSYGGCIPAILEALDSIEDVEDALSPWA 149
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYTYTVLMDGL 195
R I +L + H +RA+ + + + +G + N+ Y +++ L
Sbjct: 150 ERLSNKERTI------------ILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 197
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
K + + Q ++ +++ KG TY +ID Y K GL AL + KM G PD
Sbjct: 198 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 257
Query: 256 VTYGIIIRALFKKGENEKAEKLLRE 280
VT GI+++ K E +KAE+ ++
Sbjct: 258 VTTGIVLQMYKKAREFQKAEEFFKK 282
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +IF M + G+ + + +++GLCK +V EA L M K I + + Y ++++
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
CK + DA ++ +M + GI PN +Y L+ L + +D A+A ++ E G P
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
N+ T+ L+D LC+V ++ AQ + KG+ +NV+ +D
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+++ LCK+G V+EA +F +M +G P +V Y+++++ +C ++ AK IF M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ + SY +++ GL M+D+A + +EM + + L+D LC+++ A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 136 KLVNEMNHRGIPPNVITYNPLLD 158
++ +N +G NV +D
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMD 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+++ + +M +I + + +++DGLCK +A KL M +G P V+ Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
++ CK+H ++ A + +K++ GI PN ++Y VL+ GL L DA ++L G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 217 NLNVRTYSVMIDGYCK 232
+ NV T+ ++D C+
Sbjct: 233 SPNVPTFVELVDALCR 248
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 27 KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
+++ +F M + GL PN V+ ++DG C V +A +F M +G +V YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
+ CK +++A + +M + I + Y L+ GL DA +EM G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
PNV T+ L+D LC+ V++A + I + ++G N+ MD
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
D+ ++ +M G+ PN + +LD LCK V A+ L + ++G P + YT ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ CK +++DA+ IF+ + G N +Y V++ G + D+A+ S+M SG
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 253 PDAVTYGIIIRAL 265
P+ T+ ++ AL
Sbjct: 234 PNVPTFVELVDAL 246
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 172 LIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC 231
+ KK++E G+ PN ++DGLCK G +++A ++F + KG V Y+ +++ +C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 232 KEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
K ++A + KM+++G P+A +YG++++ L+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
EV + +VEA CK +++AK +F M G+ PN SY L+ G ++ A
Sbjct: 164 PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAF 223
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ M++ G + +V ++ +++ LC++K V++A S ++ ++ K + +D
Sbjct: 224 CSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ +IF M + G+ + + +++GLCK +V EA L M K I + + Y ++++
Sbjct: 118 SDEIFKKMKEGGL---IPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVE 174
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
CK + DA ++ +M + GI PN +Y L+ L + +D A+A ++ E G P
Sbjct: 175 AFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSP 234
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMID 228
N+ T+ L+D LC+V ++ AQ + KG+ +NV+ +D
Sbjct: 235 NVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
+++ LCK+G V+EA +F +M +G P +V Y+++++ +C ++ AK IF M G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ + SY +++ GL M+D+A + +EM + + L+D LC+++ A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 136 KLVNEMNHRGIPPNVITYNPLLD 158
++ +N +G NV +D
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFMD 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
+++ + +M +I + + +++DGLCK +A KL M +G P V+ Y +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
++ CK+H ++ A + +K++ GI PN ++Y VL+ GL L DA ++L G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 217 NLNVRTYSVMIDGYCK 232
+ NV T+ ++D C+
Sbjct: 233 SPNVPTFVELVDALCR 248
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 27 KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTII 86
+++ +F M + GL PN V+ ++DG C V +A +F M +G +V YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 87 INGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
+ CK +++A + +M + I + Y L+ GL DA +EM G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
PNV T+ L+D LC+ V++A + I + ++G N+ MD
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
D+ ++ +M G+ PN + +LD LCK V A+ L + ++G P + YT ++
Sbjct: 117 DSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ CK +++DA+ IF+ + G N +Y V++ G + D+A+ S+M SG
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 253 PDAVTYGIIIRAL 265
P+ T+ ++ AL
Sbjct: 234 PNVPTFVELVDAL 246
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 172 LIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYC 231
+ KK++E G+ PN ++DGLCK G +++A ++F + KG V Y+ +++ +C
Sbjct: 121 IFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFC 177
Query: 232 KEGLFDEALILMSKMESSGCIPDAVTYGIIIRALF 266
K ++A + KM+++G P+A +YG++++ L+
Sbjct: 178 KAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY 212
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 60/116 (51%)
Query: 8 AEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI 67
EV + +VEA CK +++AK +F M G+ PN SY L+ G ++ A
Sbjct: 164 PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAF 223
Query: 68 FNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ M++ G + +V ++ +++ LC++K V++A S ++ ++ K + +D
Sbjct: 224 CSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFMD 279
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKM 95
MVK G+E + ++YS+++ NKA + F M + G+ D +Y+ I++ K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 96 VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLV-NEMNHRGIPPNVITYN 154
V+E SL + D I + S++ + +D + V EM + PNV+ YN
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAF-SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 155 PLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
LL+ + ++ A +L ++ E G+ PN T T L+ K +DA ++++++ K
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 215 GYNLNVRTYSVMIDGYCKEGLFDEALILMSKM-ESSGCIPDAVTYGIIIRALFKKGENEK 273
+ ++ Y+ +++ GL +EA L + M ES C PD +Y ++ G+ EK
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEK 450
Query: 274 AEKLLREMV 282
A +L EM+
Sbjct: 451 AMELFEEML 459
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 2/203 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
F++L + + G+ + V M ++PN+V Y++L++ + A+ +FN M+
Sbjct: 294 FSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEML 353
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+ G+T + ++ T ++ K + +A L EM +KK D I YN+L++ +
Sbjct: 354 EAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEE 413
Query: 133 DAWKLVNEMNHR-GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A +L N+M P+ +Y +L++ ++A+ L +++ + G+Q N+ T L
Sbjct: 414 EAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 192 MDGLCKVGRLKDAQEIFQDILIK 214
+ L K R+ D +F D+ IK
Sbjct: 474 VQCLGKAKRIDDVVYVF-DLSIK 495
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ +++ K G V+E +++ V G +P+ +++S L + + + + + M
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V +V Y ++ + + A SL NEM + + +L+ K +
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTYTV 190
DA +L EM + P + I YN LL++ + A L ++E +P+ ++YT
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+++ G+ + A E+F+++L G +NV + ++ K D+ + + G
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLL 278
PD G ++ + +E AEK++
Sbjct: 498 VKPDDRLCGCLLSVMALCESSEDAEKVM 525
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 101 SLLNEMHSKKIIA-DTICYNSLIDGLCKLERSFDA-WKLVNEMNHRGIPPNVITYNPLLD 158
+ N + SK + +TI YN + L + R F ++ EM G+ + ITY+ ++
Sbjct: 171 TFFNWVKSKSLFPMETIFYNVTMKSL-RFGRQFQLIEEMALEMVKDGVELDNITYSTIIT 229
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
+ + ++AI +++ + G+ P+ TY+ ++D K G++++ +++ + G+
Sbjct: 230 CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKP 289
Query: 219 NVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+ +SV+ + + G +D ++ +M+S P+ V Y ++ A+ + G+ A L
Sbjct: 290 DAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLF 349
Query: 279 REMVARSL 286
EM+ L
Sbjct: 350 NEMLEAGL 357
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 46/265 (17%)
Query: 58 VKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH----SKKIIA 113
++E K FN++ + + TI N K + L+ EM +
Sbjct: 163 LREWQKTHTFFNWVKSKSL---FPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVEL 219
Query: 114 DTICYNSLID--GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV----- 166
D I Y+++I C L W M G+ P+ +TY+ +LDV KS V
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEW--FERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLS 277
Query: 167 --DRAIA----------------------------LIKKIEEQGIQPNMYTYTVLMDGLC 196
+RA+A ++++++ ++PN+ Y L++ +
Sbjct: 278 LYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMG 337
Query: 197 KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAV 256
+ G+ A+ +F ++L G N +T + ++ Y K +AL L +M++ D +
Sbjct: 338 RAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFI 397
Query: 257 TYGIIIRALFKKGENEKAEKLLREM 281
Y ++ G E+AE+L +M
Sbjct: 398 LYNTLLNMCADIGLEEEAERLFNDM 422
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
+ V +N L+EA+ + G A+++F M++ GL PN + ++L+ Y + A
Sbjct: 322 VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM-HSKKIIADTICYNSLIDG 124
++ M + D Y ++N I + +EA L N+M S + D Y ++++
Sbjct: 382 QLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNI 441
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
++ A +L EM G+ NV+ L+ L K+ +D + + ++G++P+
Sbjct: 442 YGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 82 SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF---DAWKLV 138
+Y I+I+ LCK+ +D+A ++ +M + ++ Y+ + LC L R + +AW++V
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPI---LCSLTRKYKIEEAWRVV 165
Query: 139 NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKV 198
M + + +V YN L C ++ A +++KIEE G P+ +Y L+ G C+
Sbjct: 166 ESMRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRA 225
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
G+++ A I + + G + T++ +I G + G + L + D+ ++
Sbjct: 226 GKVEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESF 285
Query: 259 GIIIRALFKKGENEKAEKLLREMVARSLH 287
G + L K+ E+A +++EMV R L
Sbjct: 286 GFLAGKLVKRKRYEEAMIVVKEMVMRGLR 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 91/200 (45%)
Query: 47 SYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEM 106
+Y L+ C + ++ A + M + +Y I+ L + ++EAW ++ M
Sbjct: 109 AYDILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESM 168
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
SK + D YN + C A +++ ++ G P+ +Y+ L+ C++ V
Sbjct: 169 RSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKV 228
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
+ A+A+++++EE G+ T+ ++ GL + G E K L+ ++ +
Sbjct: 229 EAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGFL 288
Query: 227 IDGYCKEGLFDEALILMSKM 246
K ++EA+I++ +M
Sbjct: 289 AGKLVKRKRYEEAMIVVKEM 308
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + + +V +N + + C +G ++ A V + + G P+ SY +L+ G C +
Sbjct: 168 MRSKSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGK 227
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V A I M + GVT ++ +I GL + + K + D+ +
Sbjct: 228 VEAAMAILRRMEEDGVTVLYSTHAHVITGLVEGGYYALGLEFVMAYAGKDLRLDSESFGF 287
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGI 146
L L K +R +A +V EM RG+
Sbjct: 288 LAGKLVKRKRYEEAMIVVKEMVMRGL 313
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 48/296 (16%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R N + + + G + EA+++F + + N V++++++ GY +E+N+A+ +F+
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDV 96
Query: 71 MVQRGVTHDVQSYTIIINGLCK---IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
M +R DV ++ +I+G I+ ++EA L +EM S+ D+ +N++I G K
Sbjct: 97 MPKR----DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAK 148
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
R +A L +M R N ++++ ++ C++ VD A+ L +K+ + P
Sbjct: 149 NRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP---- 200
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDI--LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
L+ GL K RL +A + L+ G V Y+ +I GY + G + A L +
Sbjct: 201 LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ 260
Query: 246 MESSGCIPD-----------------AVTYGIIIRALFKKGENEKAEKLLREMVAR 284
IPD V++ +I+A K G+ A L +M R
Sbjct: 261 ------IPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 132/275 (48%), Gaps = 18/275 (6%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++N +++A K G+V A+ +F M + + +S+++++DGY V + A +F+
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M R D S+ ++++G + V+ A + K T+ +NS+I K +
Sbjct: 337 EMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKH----TVSWNSIIAAYEKNK 388
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIAL-IKKIEEQGIQPNMYTY 188
+A L MN G P+ T LL + V+ + + + +I + + P++ +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLS--ASTGLVNLRLGMQMHQIVVKTVIPDVPVH 446
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ + G + +++ IF ++ +K V T++ MI GY G EAL L M+S
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLK---REVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
+G P +T+ ++ A G ++A+ M++
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMS 538
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 129/282 (45%), Gaps = 11/282 (3%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+TF+I+ E L K G ++A +F ++ K + + ++++ C V +A + +
Sbjct: 139 QTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHH 198
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+++ Y ++ G + V EA ++ +M S I D C+NSL+ LC ER
Sbjct: 199 HKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC--ER 256
Query: 131 SF---------DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ +A ++ EM I P ++YN LL L ++ V + ++++++ G
Sbjct: 257 NVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGC 316
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
P+ +Y ++ L GR +I +++ +G+ + Y +I C + AL
Sbjct: 317 DPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQ 376
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
L KM+ S Y ++I L K G EK +L E ++
Sbjct: 377 LFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALS 418
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK----- 63
E+ + L+ + NVKEA+ V M G+ P++ ++SL+ C + VN+
Sbjct: 207 ELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLC-ERNVNRNPSGL 265
Query: 64 AKDIFNFMVQRGVTHDVQ----SYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
+ N M++ ++ +Q SY I+++ L + + V E+ +L +M DT Y
Sbjct: 266 VPEALNIMLEMR-SYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYY 324
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
++ L R ++V+EM RG P Y L+ VLC V+ A+ L +K++
Sbjct: 325 FVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRS 384
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
+ Y +L+ LCK G + +E++++ L
Sbjct: 385 SVGGYGQVYDLLIPKLCKGGNFEKGRELWEEAL 417
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/228 (17%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
LL+++ + D ++ + + L K+ + DA + ++ P + T ++ LC
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 162 KSHHVDRAIA-----------------------------------LIKKIEEQGIQPNMY 186
HV RA+ +I+ ++ GI P+++
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDIL-----IKGYNLNVR--TYSVMIDGYCKEGLFDEA 239
+ L+ LC+ ++ + + L ++ Y + +Y++++ + E+
Sbjct: 245 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 304
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
++ +M+ SGC PD +Y ++R L+ G K +++ EM+ R
Sbjct: 305 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFR 352
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 136/307 (44%), Gaps = 35/307 (11%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMD------------------ 53
T I+++ LCKEG +KE ++ + + P+++ +SL+
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRL 295
Query: 54 ----------GYCLV-------KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMV 96
GY +V ++ A+ +F+ M+QRG + + YT+ + C+ V
Sbjct: 296 LMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDV 355
Query: 97 DEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
EA LL+EM + +N LI G + + M RG+ P+ +N +
Sbjct: 356 KEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEM 415
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ + K +V+RA ++ K ++G P+ +TY+ L+ G + + A ++F ++ +
Sbjct: 416 VKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKM 475
Query: 217 NLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
+ + +I G C G + + M+ P+A Y +I+A K G+ A++
Sbjct: 476 SPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADR 535
Query: 277 LLREMVA 283
+ EM++
Sbjct: 536 VYNEMIS 542
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 100/212 (47%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + A + + V C++G+VKEA+ + + M + G+ P +++ L+ G+
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
K + MV RG+ ++ ++ + KI+ V+ A +L + K + D Y+
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LI G + A KL EM +R + P + L+ LC V+ +K ++++
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDIL 212
I+PN Y L+ K+G +A ++ +++
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%)
Query: 51 LMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKK 110
L+ Y ++ + D+F + G T V + +I+ K K+ D W + K+
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 111 IIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAI 170
I + I +I LCK R + L++ + + P+VI L+ + + ++ ++
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 171 ALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGY 230
+L+K++ + + + Y++++ K G L A+++F ++L +G++ N Y+V +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 231 CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
C++G EA L+S+ME SG P T+ +I + G EK + MV R L
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 128/277 (46%), Gaps = 17/277 (6%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF ++ A +K+ K + ++ G+ N+V SSL+D Y V +A+ +FN M
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
++ + S++ ++ G C+ ++A + EM K D C+ +++ L
Sbjct: 327 SKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAV 378
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
++ + RG NVI + L+D+ KS +D A + K+ + NM T+ +
Sbjct: 379 RLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR----NMITWNAM 434
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA---LILMSKMES 248
+ L + GR ++A F D++ KG + ++ ++ G+ DE +LM+K S
Sbjct: 435 LSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAK--S 492
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G P Y +I L + G E+AE LL R+
Sbjct: 493 YGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 44/318 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV +DA T + V+A + G V+ + V++ G E N S+L Y + +E
Sbjct: 154 MVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNRE 213
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH-SKKIIADTICYN 119
A+ +F+ M + DV +T +++ K + +EA L MH K ++ D +
Sbjct: 214 PVDARRVFDEMPEP----DVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG 269
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+++ L R ++ ++ GI NV+ + LLD+ K V A + + ++
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI---------------------------- 211
N +++ L+ G C+ G + A EIF+++
Sbjct: 330 ----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 212 ---LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
+ +G NV S +ID Y K G D A + SKM I + +T+ ++ AL +
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQN 441
Query: 269 GENEKAEKLLREMVARSL 286
G E+A +MV + +
Sbjct: 442 GRGEEAVSFFNDMVKKGI 459
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 27/271 (9%)
Query: 25 NVKEAKNVF-AVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSY 83
++E + VF VK + +S++S+M GY KE KA ++F MV G+ D +
Sbjct: 112 GMRETRRVFDGRFVK-----DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL--DANEF 164
Query: 84 TIIINGLCKIKMVDEAWSL-LNEMHSKKIIADTICYNSLIDG----LCKLER-SFDAWKL 137
T+ +K E + L +I +N I L + R DA ++
Sbjct: 165 TLS----SAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRV 220
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE-QGIQPNMYTYTVLMDGLC 196
+EM P+VI + +L K+ + A+ L + +G+ P+ T+ ++
Sbjct: 221 FDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 197 KVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAV 256
+ RLK +EI ++ G NV S ++D Y K G EA + + M ++V
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSV 332
Query: 257 TYGIIIRALFKKGENEKAEKLLREMVARSLH 287
++ ++ + GE+EKA ++ REM + L+
Sbjct: 333 SWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEP-NIVSYSSLMDGYCLVKEVNKA 64
ID + T ++L C + + A++ F++MV+ G++ + S + ++ C E+ +A
Sbjct: 172 IDEKTCTLHLLNLKRCDQMEL--ARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRA 229
Query: 65 KDIFNFM-VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+++ M + +GV ++ ++ +I K +E +L M + ++ D Y LID
Sbjct: 230 RELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLID 289
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G + +A +LV M+ + + YN +++ + V++ I L ++ +G+ P
Sbjct: 290 GFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTP 349
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N TY VLM+GLCK G++ +A ++ + + ++ YS + + + G+ D++L ++
Sbjct: 350 NKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVV 409
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENE 272
++M G IP A + +LF+ E
Sbjct: 410 AEMIRDGFIPGATICERLADSLFEVNRKE 438
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
++ ++ +L++ G V+EA+ + +M + L Y+ +M+GY V K +++
Sbjct: 280 DLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELY 339
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M RGVT + +Y +++NGLCK V EA S LNE+ + D Y++L + ++
Sbjct: 340 SEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRV 399
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
+ ++V EM G P L D L + + A LI + + GI+P
Sbjct: 400 GMIDKSLEVVAEMIRDGFIPGATICERLADSLFEVNR-KEAQMLITIVVKCGIKP 453
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+ + +A + G ++ + + +++K+GLE + ++++ Y + +A IF M
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ DV ++ +I G K ++D+A +L +EM + + + +NS+I G + R
Sbjct: 188 I----GFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRF 239
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
DA + EM + + P+ T LL+ ++ + + I + N T L
Sbjct: 240 KDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTAL 299
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+D CK G +++ +F+ K + ++ MI G G + A+ L S++E SG
Sbjct: 300 IDMYCKCGCIEEGLNVFECAPKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGL 355
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREM 281
PD+V++ ++ A GE +A++ R M
Sbjct: 356 EPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ + G K+A ++F M ++ ++P+ + SL++ + + + I ++
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ + T +I+ CK ++E ++ E KK ++ C+NS+I GL
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKKQLS---CWNSMILGLANNGFE 340
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYTYTV 190
A L +E+ G+ P+ +++ +L S V RA + ++E+ I+P++ YT+
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 191 LMDGLCKVGRLKDAQEIFQDILIK 214
+++ L G L++A+ + +++ ++
Sbjct: 401 MVNVLGGAGLLEEAEALIKNMPVE 424
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 2 VLQCIDA-EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
V +C ++ +N ++ L G + A ++F+ + + GLEP+ VS+ ++ E
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 61 VNKAKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
V++A + F M ++ + ++ YT+++N L +++EA +L+ M ++ DT+ ++
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE---DTVIWS 431
Query: 120 SLIDGLCKL 128
SL+ K+
Sbjct: 432 SLLSACRKI 440
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 3/265 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T +ILV+ CK+G + EA++ ++ L+D C ++ +A + + +
Sbjct: 253 THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEI 312
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHS-KKIIADTICYNSLIDGLCKLER 130
G + ++Y I I L K ++ L ++ + + YNS++ L K E
Sbjct: 313 KLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK-EN 371
Query: 131 SFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ D + ++ EM RG+ PN T N L CK+ VD A+ L + E G P +Y
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+ LC ++ A ++ + + +G+ L +T+S + + C +G D A L+
Sbjct: 432 YLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAER 491
Query: 250 GCIPDAVTYGIIIRALFKKGENEKA 274
+P + II AL G+ E A
Sbjct: 492 DLLPKRIAGCKIISALCDVGKVEDA 516
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 18/285 (6%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L + +V+ +N+ +E G K A+ V+ +M + G+ P + S ++ Y +++
Sbjct: 596 LSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
A F+ + ++G T + Y ++I GLCK +D+A L EM + + CY I
Sbjct: 656 DALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
LC E+ +A LVNE G N LL KS V A ++ IE++
Sbjct: 715 QKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDK--I 772
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEI--FQDILIKGYNLNVRTYSVMIDGYCKEGLFDEAL 240
P M + L+ GL GR+ E+ +++ K Y L++ TY++++ ++A
Sbjct: 773 PEMKSLGELI-GLFS-GRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQA-EDAY 829
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
++ ++ G +P+ T I+ E+A ++L E +RS
Sbjct: 830 EMVERIARRGYVPNERTDMIL----------ERANRILEERNSRS 864
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 2/277 (0%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+R + LV G A F M +GL+ + Y L++ K + IF+
Sbjct: 182 LRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFD 241
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ RG V +++I++ CK +DEA L + L+D LC
Sbjct: 242 QISVRGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKR 300
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE-QGIQPNMYTY 188
+ +A KL++E+ G YN + L K+ ++ ++KI +G + ++ Y
Sbjct: 301 KFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRY 360
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
++ L K L +I +++++G + N +T + + +CK G DEAL L
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
G P A++Y +I L E+A +L+ + R
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 12/278 (4%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+++ + +T N + CK G V EA ++ + G P +SY+ L+ C +
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V +A D+ + RG ++++ + N LC D A L+ + ++ I
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 121 LIDGLCKLERSFDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+I LC + + DA ++NE+ N G+ + + L+ D A LI +++E+
Sbjct: 503 IISALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG----YNLNVRTYSVMIDGYCKEGL 235
G P Y ++ +C+ ++ ++ F L+K + V+ Y++ I+G G
Sbjct: 562 GYTPTRSLYRNVIQCVCE---MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGK 618
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEK 273
A ++ M+ G P + +++++ K NEK
Sbjct: 619 PKLARLVYDMMDRDGITPTVASNILMLQSYLK---NEK 653
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L+ + EV +N +V L KE N+ ++ M+ +G+ PN + ++ + +C V+
Sbjct: 350 LEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVD 409
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
+A +++ + G SY +I+ LC + V++A+ +L + +++L
Sbjct: 410 EALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLT 469
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ LC + A +LV R + P I ++ LC V+ A+ + + + G+
Sbjct: 470 NALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVD 529
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
+ +T L+ G + R A ++ + KGY Y +I C+
Sbjct: 530 TSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 124/289 (42%), Gaps = 6/289 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M + +D + +++L+ AL +E +F + +G V++S L+ +C +
Sbjct: 208 MRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGF-VCAVTHSILVKKFCKQGK 266
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+++A+D ++ I+++ LC + EA LL+E+ + YN
Sbjct: 267 LDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNI 326
Query: 121 LIDGLCK---LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE 177
I L K L D + ++ + G V YN ++ L K +++D ++ ++
Sbjct: 327 WIRALIKAGFLNNPADFLQKISPLE--GCELEVFRYNSMVFQLLKENNLDGVYDILTEMM 384
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
+G+ PN T + CK G + +A E+++ G+ +Y+ +I C +
Sbjct: 385 VRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVE 444
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+A ++ G T+ + AL KG+ + A +L+ R L
Sbjct: 445 QAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDL 493
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 12/269 (4%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
LV + G++ K + + + GL I ++LMD + ++++A+ IF+ + +R
Sbjct: 263 LVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRT 322
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAW 135
+ S+T +I+G + ++D + L ++M K D + +N++I G + +R DA
Sbjct: 323 IV----SWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDAL 374
Query: 136 KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGL 195
L EM P+ IT L + +D I + + IE+ + N+ T L+D
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
K G + +A +F I + N TY+ +I G G A+ ++M +G PD
Sbjct: 435 AKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Query: 256 VTYGIIIRALFKKGENEKAEKLLREMVAR 284
+T+ ++ A G + +M +R
Sbjct: 491 ITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 129/306 (42%), Gaps = 53/306 (17%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L++ K G++ EA+ +F + K+ IVS+++++ GY ++ ++ +F+ M +
Sbjct: 296 NALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARCGLLDVSRKLFDDMEE 351
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY--------------- 118
+ DV + +I G + K +A +L EM + D I
Sbjct: 352 K----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 119 --------------------NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
SL+D K +A + + + R N +TY ++
Sbjct: 408 GIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIG 463
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
L AI+ ++ + GI P+ T+ L+ C G ++ ++ F + + +NL
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR-FNL 522
Query: 219 N--VRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEK 276
N ++ YS+M+D + GL +EA LM M DA +G ++ G E EK
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA---DAAVWGALLFGCRMHGNVELGEK 579
Query: 277 LLREMV 282
++++
Sbjct: 580 AAKKLL 585
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 127/271 (46%), Gaps = 12/271 (4%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N L+ K G ++A V+ +M +G++P+ V+ L+ ++ ++N+ K+ + ++
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G+ + +++ K + EA + + + + I++ + ++I G +
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS----WTTMISGYARCGLL 339
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+ KL ++M + +V+ +N ++ ++ A+AL ++++ +P+ T
Sbjct: 340 DVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHC 395
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ ++G L I + I +LNV + ++D Y K G EAL + +++
Sbjct: 396 LSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-- 453
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+++TY II L G+ A EM+
Sbjct: 454 --NSLTYTAIIGGLALHGDASTAISYFNEMI 482
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 115/281 (40%), Gaps = 21/281 (7%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGL---EPNIVSYSSLMDGYCLVKEVNK 63
+ + ++N+ + + N KE+ ++ M++ G P+ +Y L ++ +
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
I +++ + + I+ ++ A + +E + D + +N LI+
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE----SPVRDLVSWNCLIN 230
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G K+ + A + M G+ P+ +T L+ ++R + ++E G++
Sbjct: 231 GYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRM 290
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT---YSVMIDGYCKEGLFDEAL 240
+ LMD K G + +A+ IF NL RT ++ MI GY + GL D +
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFD-------NLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
L ME D V + +I + + A L +EM
Sbjct: 344 KLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEM 380
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 126/278 (45%), Gaps = 8/278 (2%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ ++ FN + + N E ++F +++ G+ P+ ++ SL+ + K + + +
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ ++ G+ +V +IN + + VD A + + + + +CYN++I G
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI----VEPCVVCYNAMITGYA 206
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ R +A L EM + + PN IT +L +D + K ++ +
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T L+D K G L DA IF+ + K + + +S MI Y G ++++++ +M
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFERM 322
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
S PD +T+ ++ A G E+ K +MV++
Sbjct: 323 RSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 133/273 (48%), Gaps = 3/273 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N + L + +V E +V M G + ++ +Y + + + + + ++ +M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 72 VQRGVTHDVQSYTIIINGLCKIKM--VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ +Q ++++ L +D + + + S Y+ + L +
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVG 384
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R +A ++ M + G P+ ITY+ L+ LCK+ ++ A ++ ++E QG P++ T+T
Sbjct: 385 RFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWT 444
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA-LILMSKMES 248
+L+ G CK L A F ++L KG++++ V+IDG+ F+ A + LM +++
Sbjct: 445 ILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKN 504
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ P TY ++I L K ++E+A LL+ M
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM 537
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
H +Y + L + V E WS+++EM T Y+ +D K+ R F ++
Sbjct: 261 HSTVTYNAALRVLARPNSVAEFWSVVDEMK-------TAGYDMDLDTYIKVSRQFQKSRM 313
Query: 138 VNE-------MNHRGIPPNVITYNPLLDVLCKSHH--VDRAIALIKKIEEQGIQPNMYTY 188
+ E M P++ + LL L S + +D + +K E G + Y
Sbjct: 314 MAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVY 373
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ L VGR +A+EI + + GY + TYS ++ G CK +EA ++ +ME+
Sbjct: 374 DGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEA 433
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKA 274
GC PD T+ I+I+ K E +KA
Sbjct: 434 QGCFPDIKTWTILIQGHCKNNELDKA 459
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 42/233 (18%)
Query: 83 YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMN 142
Y I L + DEA + M + D I Y+ L+ GLCK +R +A ++++M
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 143 HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG---------------------- 180
+G P++ T+ L+ CK++ +D+A+A + E+G
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 181 --------------IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
++P TY +L+D L K+ + ++A ++ Q + + Y Y+
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYP----AYAEA 548
Query: 227 IDGY-CKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
DGY K G ++A + + S P Y +I A +++G A+ LL
Sbjct: 549 FDGYLAKFGTLEDAKKFLDVLSSKDS-PSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M Q +++T+ IL++ CK + +A FA M+++G + + L+DG+ + +
Sbjct: 431 MEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNK 490
Query: 61 VNKAKDIFNFMVQRGVTHDVQS-YTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
A MV+ QS Y ++I+ L KIK +EA LL M + A ++
Sbjct: 491 FEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIP 147
+ LE DA K ++ ++ + P
Sbjct: 551 GYLAKFGTLE---DAKKFLDVLSSKDSP 575
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
EV +N+ ++ K ++++++ +F M+++G++P+ ++++++ +A + F
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G D + +I+ + VD A SL + ++K D + +++LI + +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR-IYGV 292
Query: 129 ERSFDA-WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
++D + EM G+ PN++ YN L+D + ++ +A + K + G PN T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y L+ + DA I++++ KG +L V Y+ ++ DEA + M+
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Query: 248 S-SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ C PD+ T+ +I G +AE L +M
Sbjct: 413 NCETCDPDSWTFSSLITVYACSGRVSEAEAALLQM 447
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 3/212 (1%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TF+ L+ GN N++ M G++PN+V Y+ L+D K +AK I+ +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ G T + +Y ++ + + D+A ++ EM K + I YN+L+ +C R
Sbjct: 342 ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRY 400
Query: 132 FD-AWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
D A+++ +M N P+ T++ L+ V S V A A + ++ E G +P ++ T
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
++ K ++ D F +L G + R
Sbjct: 461 SVIQCYGKAKQVDDVVRTFDQVLELGITPDDR 492
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 3/255 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + I + TF ++ + G K A F M G EP+ V+ ++++D Y
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
V+ A +++ D +++ +I D ++ EM + + + + YN
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
LID + + +R + A + ++ G PN TY L+ ++ + D A+A+ ++++E+G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 181 IQPNMYTYTVLMDGLCKVGRLKD-AQEIFQDIL-IKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ + Y L+ +C R D A EIFQD+ + + + T+S +I Y G E
Sbjct: 381 LSLTVILYNTLL-SMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE 439
Query: 239 ALILMSKMESSGCIP 253
A + +M +G P
Sbjct: 440 AEAALLQMREAGFEP 454
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 86/181 (47%)
Query: 102 LLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLC 161
L N + + K + I YN + K + + KL +EM RGI P+ T+ ++
Sbjct: 162 LNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 162 KSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVR 221
++ RA+ +K+ G +P+ T ++D + G + A ++ + + ++
Sbjct: 222 QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAV 281
Query: 222 TYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
T+S +I Y G +D L + +M++ G P+ V Y +I ++ + +A+ + +++
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 282 V 282
+
Sbjct: 342 I 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%)
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
VI YN + V KS ++++ L ++ E+GI+P+ T+T ++ + G K A E F+
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 210 DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKG 269
+ G + T + MID Y + G D AL L + + DAVT+ +IR G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 270 ENEKAEKLLREMVA 283
+ + EM A
Sbjct: 295 NYDGCLNIYEEMKA 308
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 101/242 (41%), Gaps = 35/242 (14%)
Query: 45 IVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLN 104
++ Y+ M + K++ K++ +F+ M++RG+ D ++T II+ + + A
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 105 EMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH 164
+M S D + ++ID + A L + + +T++ L+ + S
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
+ D + + ++++ G++PN+ Y L+D + + R A+ I++D++ G+
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT------- 347
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
P+ TY ++RA + + A + REM +
Sbjct: 348 ----------------------------PNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 285 SL 286
L
Sbjct: 380 GL 381
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 15/256 (5%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ ++N ++ + G +++A+ +F M +E N VS+++++ GY ++ KA F
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFF 209
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
RGV ++T +I G K K V+ A ++ +M K + + +N++I G +
Sbjct: 210 KVAPVRGVV----AWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVTWNAMISGYVEN 262
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
R D KL M GI PN + L + + + + + + + ++
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+ CK G L DA ++F+ + K +V ++ MI GY + G D+AL L +M
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 249 SGCIPDAVTYGIIIRA 264
+ PD +T+ ++ A
Sbjct: 379 NKIRPDWITFVAVLLA 394
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T+N ++ + ++ +F M+++G+ PN SS + G + + + I +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+ + +DV + T +I+ CK + +AW L M K D + +N++I G + +
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNA 366
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK-IEEQGIQPNMYTYTV 190
A L EM I P+ IT+ +L + V+ +A + + + ++P YT
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGY 216
++D L + G+L++A ++ + + + +
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPH 452
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V + ++ K V+ A+ +F M + N+V++++++ GY +F
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M++ G+ + + + G ++ + + + + D SLI CK
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
DAWKL M + +V+ +N ++ + + D+A+ L +++ + I+P+ T+
Sbjct: 334 ELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFV 389
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT--YSVMIDGYCKEGLFDEALILMSKME 247
++ G + F+ +++ Y + + Y+ M+D + G +EAL L+ M
Sbjct: 390 AVLLACNHAGLVNIGMAYFES-MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Query: 248 SSGCIPDAVTYGIIIRA 264
P A +G ++ A
Sbjct: 449 FR---PHAAVFGTLLGA 462
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 2/260 (0%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ FN ++ A K+GNVK A F +M++ G+ PN+ + LM Y V +A+ F+
Sbjct: 211 QVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSH 270
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M + G+ + +Y+ +I ++++ D+A +++ M ++ + +++ + +
Sbjct: 271 MRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A ++ M G PN+I YN L+ K ++ A L ++ G++P+ +Y
Sbjct: 330 MELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRS 389
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+++G + ++A+ +Q++ GY N +I+ K G D A+ + M G
Sbjct: 390 MIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Query: 251 CIPDAVTYGIIIRALFKKGE 270
C ++ GII++A K G+
Sbjct: 450 CQYSSIL-GIILQAYEKVGK 468
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 136/280 (48%), Gaps = 12/280 (4%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQ-GLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
F+I+V K G+++EA +V +M +Q + P++ + ++ Y +K + ++ +
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID--GLCKLE 129
+ G+ + + Y +IN + +DE EM +T+ +N L+D G KL
Sbjct: 656 RKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL- 714
Query: 130 RSFDAWKLVNEM---NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+K VNE+ R +VI+YN ++ K+ + IK ++ G ++
Sbjct: 715 -----FKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE 769
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
Y L+D K +++ + I + + + TY++MI+ Y ++G DE ++ ++
Sbjct: 770 AYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKEL 829
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ SG PD +Y +I+A G E+A L++EM R++
Sbjct: 830 KESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNI 869
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N ++ + + E F M++ G PN V+++ L+D Y K K ++F
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF---- 722
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
LL + H + D I YN++I K +
Sbjct: 723 -----------------------------LLAKRHG---VVDVISYNTIIAAYGKNKDYT 750
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+ + M G ++ YN LLD K +++ +++K++++ P+ YTY +++
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI 810
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+ + G + + ++ +++ G ++ +Y+ +I Y G+ +EA+ L+ +M I
Sbjct: 811 NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Query: 253 PDAVTYGIIIRALFKKGE 270
PD VTY ++ AL + E
Sbjct: 871 PDKVTYTNLVTALRRNDE 888
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 34/301 (11%)
Query: 15 ILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQR 74
+++ A ++G ++ A+++ M G PNI++Y++L+ GY + ++ A+ +F+ +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 75 GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDA 134
G+ D SY +I G + +EA E+ ++ +LI+ K A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 135 WKLVNEMN----------------------------------HRGIPPNVITYNPLLDVL 160
K + +M H I N +++ L+
Sbjct: 439 IKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAY 498
Query: 161 CKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNV 220
K VD + L+++ + + + Y +L+ + G+L DA +I+ + +N+
Sbjct: 499 VKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINL 558
Query: 221 RTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
S MID Y G F EA L ++SSG + D + + I++R K G E+A +L
Sbjct: 559 HITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEI 618
Query: 281 M 281
M
Sbjct: 619 M 619
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V ++N ++ A K + + M G ++ +Y++L+D Y K++ K + I
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M + D +Y I+IN + +DE +L E+ + D YN+LI
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+A LV EM R I P+ +TY L+ L ++ AI +++ GI
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 131/283 (46%), Gaps = 10/283 (3%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D T +ILV AL G +EA+++ +++ +E + V Y++L+ ++ A +
Sbjct: 736 DPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
I+ M GV +Q+Y +I+ + +D+A + + + D Y ++I
Sbjct: 796 IYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYG 855
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKS---HHVDRAIALIKKIEEQGIQP 183
K + +A L +EM +GI P +YN ++ + S H VD L++ +E G
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDE---LLQAMERNGRCT 912
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
++ TY L+ + + +A++ + KG L+ +S ++ K G+ +EA
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTY 972
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKA----EKLLREMV 282
KM +G PD+ I++ G+ EK EK++R V
Sbjct: 973 CKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSV 1015
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 120/270 (44%), Gaps = 1/270 (0%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
E T L+ ++ +KEAK ++ + + P S++D Y + A +F
Sbjct: 669 EEETIATLIAVYGRQHKLKEAKRLY-LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLF 727
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
++G + +I++N L EA + K I DT+ YN+LI + +
Sbjct: 728 MESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEA 787
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
+ A ++ M+ G+P ++ TYN ++ V + +D+AI + G+ + Y
Sbjct: 788 GKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIY 847
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T ++ K G++ +A +F ++ KG +Y++M+ L E L+ ME
Sbjct: 848 TNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMER 907
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
+G D TY +I+ + + +AEK +
Sbjct: 908 NGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
VL +V +++ KEGN+ E K + +M K L + V+ ++ + +V
Sbjct: 594 VLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVISSFVREGDV 651
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
+KA+ I + +++ G+ + ++ +I + + EA L K ++ S+
Sbjct: 652 SKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVI-RSM 710
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
ID + DA+ L E +G P +T + L++ L A + + E+ I
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNI 770
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
+ + Y L+ + + G+L+ A EI++ + G +++TY+ MI Y + D+A+
Sbjct: 771 ELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIE 830
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ S SG D Y +I K G+ +A L EM
Sbjct: 831 IFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEM 870
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
I+ + +N L++A+ + G ++ A ++ M G+ +I +Y++++ Y +++KA
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+IF+ + G+ D + YT +I K + EA SL +EM K I T YN ++ +
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-I 888
Query: 126 CKLER-SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C R + +L+ M G ++ TY L+ V +S A I ++E+GI +
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
++ L+ L K G +++A+ + + G + + ++ GY G ++ ++
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 245 KMESSGCIPDAVTYGII 261
KM S D ++
Sbjct: 1009 KMIRSSVEDDRFVSSVV 1025
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 113/274 (41%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ I++ + G +K A+ F M++ G EP+ V+ +++ Y + + +
Sbjct: 191 YTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQ 250
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
+R + Y +++ L K + L EM + + + Y ++ K
Sbjct: 251 ERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKE 310
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A K EM G P +TY+ ++ + K+ ++AI L + + QGI P+ YT ++
Sbjct: 311 EALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATML 370
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
K A +F D+ + ++I Y K GLF +A + + E +
Sbjct: 371 SLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLL 430
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
D TY + + G KA ++ M R +
Sbjct: 431 ADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDI 464
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 116/288 (40%), Gaps = 34/288 (11%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
MV + + T+ ++V + K+G +EA F M G P V+YSS++ +
Sbjct: 284 MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGD 343
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
KA ++ M +G+ + +++ K + +A SL +M KI AD +
Sbjct: 344 WEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGL 403
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I KL DA + E + + TY + V S +V +A+ +I+ ++ +
Sbjct: 404 IIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRD 463
Query: 181 IQPNMYTYTVLMDGLCKVGRLKDAQEIFQ------------------------------- 209
I + + Y V++ K+ + A+E F+
Sbjct: 464 IPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKG 523
Query: 210 ---DILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
I++ + ++ Y + YCKEG+ EA L+ KM + D
Sbjct: 524 FIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKD 571
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 117/275 (42%), Gaps = 1/275 (0%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N ++ +L K+ + +++ MV++G+ PN +Y+ ++ Y +A F M
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G + +Y+ +I+ K ++A L +M S+ I+ +++ K E
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A L +M IP + + ++ + K A ++ ++ E + + TY +
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G + A ++ + + + L+ Y VM+ Y K D A + +G +
Sbjct: 441 QVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG-L 499
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
PDA + ++ + EKA+ +++++ +H
Sbjct: 500 PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVH 534
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 136/272 (50%), Gaps = 28/272 (10%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++N LV K + EA+NVF +M E N+VS+++++ GY V +A+ +F
Sbjct: 79 VVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M +R S+T++ GL +D+A L + M K ++A T ++I GLC+
Sbjct: 135 RMPERNEV----SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAST----NMIGGLCREG 186
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
R +A + +EM R NV+T+ ++ +++ VD A L + + E+ ++T
Sbjct: 187 RVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWT 238
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ G GR++DA+E F+ + +K V + MI G+ + G +A + ME
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
D T+ +I+A +KG +A L +M
Sbjct: 295 ----DNATWRGMIKAYERKGFELEALDLFAQM 322
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 130/300 (43%), Gaps = 47/300 (15%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
++ LC+EG V EA+ +F M E N+V++++++ GY V+ A+ +F M ++
Sbjct: 178 MIGGLCREGRVDEARLIFDEM----RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG------LCKLE 129
S+T ++ G +++A M K +IA C N++I G + K
Sbjct: 234 EV----SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA---C-NAMIVGFGEVGEISKAR 285
Query: 130 RSFD--------AWK-----------------LVNEMNHRGIPPNVITYNPLLDVLCKSH 164
R FD W+ L +M +G+ P+ + +L V
Sbjct: 286 RVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLA 345
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
+ + + ++Y +VLM K G L A+ +F K ++ ++
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWN 401
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
+I GY GL +EAL + +M SSG +P+ VT I+ A G+ E+ ++ M ++
Sbjct: 402 SIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK 461
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 5/209 (2%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + T+ +++A ++G EA ++FA M KQG+ P+ S S++ + + +
Sbjct: 293 DRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ +V+ DV ++++ K + +A + + SK D I +NS+I G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYA 408
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNM 185
+A K+ +EM G PN +T +L + ++ + + + +E + + P +
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTV 468
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIK 214
Y+ +D L + G++ A E+ + + IK
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMTIK 497
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 16/289 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALC--KEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLV 58
M + + + TF + +A K G++ K + ++ GL ++ + ++L+ Y L+
Sbjct: 106 MRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLI 165
Query: 59 KEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY 118
++ A +F+ QR DV +Y ++I+GL K + + A L + M + D + +
Sbjct: 166 APIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRARELFDSMP----LRDLVSW 217
Query: 119 NSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
NSLI G ++ +A KL +EM G+ P+ + L +S + A+ +
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ + + + T L+D K G + A EIF+ K + T++ MI G G +
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDK----TLFTWNAMITGLAMHGNGEL 333
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ KM SSG PD VT+ ++ G ++A L +M RSL+
Sbjct: 334 TVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM--RSLY 380
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 21/269 (7%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ A + G E +F M++ +EP+ ++ S++ C + +I + +
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSI 508
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSL----------------LNEMHSKKIIADT 115
V+ G+ + +I+ K M++EA + L +MH+K++
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
+ +NS+I G E+S DA L M GI P+ TY +LD + +
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+ ++ +Q ++Y + L+D K G L D++ +F+ L + + T++ MI GY G
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF----VTWNAMICGYAHHGK 684
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRA 264
+EA+ L +M P+ VT+ I+RA
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRA 713
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 136/296 (45%), Gaps = 57/296 (19%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V ++N ++ K ++ +A + F +M + ++VS++S++ GY E K+ ++F
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVR----DVVSWNSMLSGYLQNGESLKSIEVF 168
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKII----ADTICYNSLIDG 124
M + G+ D +++ II+ K+ E SL ++H + D + ++L+D
Sbjct: 169 VDMGREGIEFDGRTFAIIL----KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 224
Query: 125 LCKLERSFDAWKLVNEMNHRGIPP-NVITYNPLLDVLCKSHHVDRAIALIKKIEE--QGI 181
K +R ++ ++ +GIP N ++++ ++ +++ + A+ K++++ G+
Sbjct: 225 YAKGKRFVESLRVF-----QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGV 279
Query: 182 QPNMYTY---------------------------------TVLMDGLCKVGRLKDAQEIF 208
++Y T +D K ++DAQ +F
Sbjct: 280 SQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILF 339
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+ NLN ++Y+ MI GY +E +AL+L ++ SSG D ++ + RA
Sbjct: 340 DN----SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ + ++A+ +F M++ G+ P+ +Y++++D + K I +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
+++ + DV + +++ K + ++ M K + D + +N++I G +
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDS----RLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-EQGIQPNMYTYTV 190
+A +L M I PN +T+ +L +D+ + ++ + G+ P + Y+
Sbjct: 686 EEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN 745
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT 222
++D L K G++K A E+ +++ + ++ RT
Sbjct: 746 MVDILGKSGKVKRALELIREMPFEADDVIWRT 777
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 122/292 (41%), Gaps = 27/292 (9%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D VRT + + A C N+++A+ ++ N SY++++ GY + KA
Sbjct: 315 DGIVRTATLDMYAKCD--NMQDAQ----ILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+F+ ++ G+ D S + + +K + E + + D N+ ID
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
K + +A+++ +EM R + +++N ++ ++ + L + I+P+ +
Sbjct: 429 KCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
T+ ++ C G L EI I+ G N +ID Y K G+ +EA + S+
Sbjct: 485 TFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 247 ----ESSGCIPD------------AVTYGIIIRALFKKGENEKAEKLLREMV 282
SG + + V++ II K ++E A+ L M+
Sbjct: 544 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 128/274 (46%), Gaps = 16/274 (5%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+ +V + V+EA+ +F M E N VS+++++ GY + + AK++F
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ M R +V ++ +I G + + EA +L ++M + D + + ++I G +
Sbjct: 336 DVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQS 387
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
SF+A +L +M G N +++ L ++ L ++ + G + +
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 447
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+ CK G +++A ++F+++ K ++ +++ MI GY + G + AL M+
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKR 503
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G PD T ++ A G +K + M
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 134/284 (47%), Gaps = 28/284 (9%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
+L+C D++++ +N+ + + + G EA VF M + + VSY+ ++ GY E
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEF 111
Query: 62 NKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
A+ +F+ M +R D+ S+ ++I G + + + +A L M + D +N++
Sbjct: 112 ELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTM 163
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ G + DA + + M + N +++N LL ++ ++ A L K E +
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
++ L+ G K ++ +A++ F + ++ +V +++ +I GY + G DEA
Sbjct: 220 ----VSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQ 271
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARS 285
L + + D T+ ++ + E+A +L +M R+
Sbjct: 272 LFDESP----VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 46/246 (18%)
Query: 2 VLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEV 61
V+ C + V T+N ++ + G + EAKN+F M K+ + VS+++++ GY
Sbjct: 337 VMPCRN--VSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHS 390
Query: 62 NKAKDIFNFMVQRGVTHDVQSYT-------------------------------IIINGL 90
+A +F M + G + S++ + N L
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 91 ----CKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGI 146
CK ++EA L EM K I++ +N++I G + A + M G+
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVS----WNTMIAGYSRHGFGEVALRFFESMKREGL 506
Query: 147 PPNVITYNPLLDVLCKSHHVDRAIALIKKI-EEQGIQPNMYTYTVLMDGLCKVGRLKDAQ 205
P+ T +L + VD+ + ++ G+ PN Y ++D L + G L+DA
Sbjct: 507 KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566
Query: 206 EIFQDI 211
+ +++
Sbjct: 567 NLMKNM 572
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 3/210 (1%)
Query: 81 QSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNE 140
SY +I LCK+ +D+A L+N+M + T ++ +++ L K R +AW++V
Sbjct: 126 HSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVEL 185
Query: 141 MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG---IQPNMYTYTVLMDGLCK 197
M IP +V +YN L C V A +++K+EE+ + P+ TY L+ G CK
Sbjct: 186 MRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACK 245
Query: 198 VGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVT 257
GR++ A I + + +G ++ T++ +I + G + ++ + D
Sbjct: 246 SGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEEN 305
Query: 258 YGIIIRALFKKGENEKAEKLLREMVARSLH 287
G + L K+ ++A+ +L+EM R L
Sbjct: 306 LGSLASKLIKRKRFKEAKMVLKEMSVRGLR 335
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 16/268 (5%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q + V N L+ A + +A VF+ M + GL + +Y L+ +
Sbjct: 76 QVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV 135
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIIN--GLCKIKMVDEAWSLLNEMHSKKIIADTICYNSL 121
K + N + + G++ D+ +I+ C V +A L +M + DT+ +NS+
Sbjct: 136 VKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSM 191
Query: 122 IDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGI 181
+ GL K DA +L +EM R ++I++N +LD + + +A L +K+ E+
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER-- 245
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALI 241
N +++ ++ G K G ++ A+ +F + + N V T++++I GY ++GL EA
Sbjct: 246 --NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN--VVTWTIIIAGYAEKGLLKEADR 301
Query: 242 LMSKMESSGCIPDAVTYGIIIRALFKKG 269
L+ +M +SG DA I+ A + G
Sbjct: 302 LVDQMVASGLKFDAAAVISILAACTESG 329
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 125/249 (50%), Gaps = 18/249 (7%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ L K G +++A+ +F M ++ +++S+++++DGY +E++KA ++F M
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKM 242
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMH--SKKIIADTICYNSLIDGLCKLE 129
+R S++ ++ G K ++ A + ++M +K ++ TI +I G +
Sbjct: 243 PERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTI----IIAGYAEKG 294
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+A +LV++M G+ + +L +S + + + ++ + N Y
Sbjct: 295 LLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN 354
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L+D K G LK A ++F DI K ++ +++ M+ G G EA+ L S+M
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRRE 410
Query: 250 GCIPDAVTY 258
G PD VT+
Sbjct: 411 GIRPDKVTF 419
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 109/227 (48%), Gaps = 15/227 (6%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ I++ ++G +KEA + MV GL+ + + S++ ++ I +
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ + + + +++ K + +A+ + N++ K D + +N+++ GL
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHG 395
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH---VDRAIALIKKIEE-QGIQPNM 185
+A +L + M GI P+ +T+ + VLC +H +D I +E+ + P +
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTF---IAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCK 232
Y L+D L +VGRLK+A ++ Q + ++ NV + ++ G C+
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEP---NVVIWGALL-GACR 495
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 140/288 (48%), Gaps = 16/288 (5%)
Query: 4 QCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNK 63
Q ++ T + + A G V+E K A+ + G+E + + +SL++ YC V +
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A+ +F+ M ++ DV ++ +II+G + +V++A + M +K+ D + +L+
Sbjct: 328 AEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 124 GLCKLERSFDAWKLVNEMN----HRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
+ E KL E+ +++ + ++D+ K + A KK+ +
Sbjct: 384 AAARTEN----LKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA----KKVFDS 435
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEA 239
++ ++ + L+ + G +A +F + ++G NV T++++I + G DEA
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEA 495
Query: 240 LILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ +M+SSG IP+ +++ ++ + + G +E+A LR+M L
Sbjct: 496 KDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 139/320 (43%), Gaps = 44/320 (13%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + + T L+ A + N+K K V ++ E +IV S++MD Y
Sbjct: 366 MRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGS 425
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ AK +F+ V++ D+ + ++ + + EA L M + + + I +N
Sbjct: 426 IVDAKKVFDSTVEK----DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNL 481
Query: 121 LIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG 180
+I L + + +A + +M GI PN+I++ +++ + ++ + AI ++K++E G
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 181 IQPNMYTYTV------------------------------------LMDGLCKVGRLKDA 204
++PN ++ TV L+D K G + A
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+++F L L+ + MI Y G EA+ L +E G PD +T ++ A
Sbjct: 602 EKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSA 657
Query: 265 LFKKGENEKAEKLLREMVAR 284
G+ +A ++ ++V++
Sbjct: 658 CNHAGDINQAIEIFTDIVSK 677
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 129/279 (46%), Gaps = 16/279 (5%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D +N L+ + G +EA +F+ M KQG+EP V+ S+ + + V + K
Sbjct: 236 DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ G+ D T ++N CK+ +++ A + + M K D + +N +I G
Sbjct: 296 SHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYV 351
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE----EQGIQ 182
+ DA + M + + +T L+ ++ + + L K+++ +
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTEN----LKLGKEVQCYCIRHSFE 407
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
++ + +MD K G + DA+++F + K L ++ ++ Y + GL EAL L
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL----WNTLLAAYAESGLSGEALRL 463
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M+ G P+ +T+ +II +L + G+ ++A+ + +M
Sbjct: 464 FYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 133/288 (46%), Gaps = 17/288 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L+ + V T+N+++ +L + G V EAK++F M G+ PN++S++++M+G
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGC 526
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVD-----EAWSLLNEMHSKKIIADT 115
+A M + G+ + S T+ ++ + + + + N HS + +T
Sbjct: 527 SEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
SL+D K A K+ + +P + N ++ ++ AIAL +
Sbjct: 587 ----SLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYGNLKEAIALYRS 638
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIK-GYNLNVRTYSVMIDGYCKEG 234
+E G++P+ T T ++ G + A EIF DI+ K + Y +M+D G
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 235 LFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
++AL L+ +M PDA ++ + K+ + E + L R+++
Sbjct: 699 ETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTELVDYLSRKLL 743
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 122/326 (37%), Gaps = 76/326 (23%)
Query: 17 VEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG- 75
V +LCK G +KEA ++ M + L Y ++ G ++++ K I +++ G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 76 --------------------------------VTHDVQSYTIIIN-----GLCKIKMVDE 98
+V S+ II GLC+ ++
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 99 AWSLLNEMHSKKIIADTIC------------------------------YNSLIDGLCKL 128
L NE+ + +C +SL D K
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
DA K+ +E+ R N + +N L+ ++ + AI L + +QG++P T
Sbjct: 222 GVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTV 277
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ + +G +++ ++ ++ G L+ + +++ YCK GL + A ++ +M
Sbjct: 278 STCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFE 337
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKA 274
D VT+ +II ++G E A
Sbjct: 338 K----DVVTWNLIISGYVQQGLVEDA 359
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLE---PNIVSYSSLMDGYCLVKEVNKAKDIFN 69
+ IL++ L + + A + V+ E NI S +++ CL ++V +A+ +
Sbjct: 221 YQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLAR 280
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+V G + Y+ I G + + ++ S + E+ K D N ++ LC+
Sbjct: 281 KLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEV---KYEPDVFVGNRILHSLCRRF 337
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
S A+ + E+ H G + +T+ L+ C + RA+ + +I +G +P++Y+Y
Sbjct: 338 GSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYN 397
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
++ GL + G + I ++ G L++ T+ +M+ GYCK F+EA +++KM
Sbjct: 398 AILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGY 457
Query: 250 GCI 252
G I
Sbjct: 458 GLI 460
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 45/263 (17%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYC--------- 56
+D E T N LV+ CK+G + +K +F MV+ + V+Y+SL+ +C
Sbjct: 597 LDGE--TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLL 654
Query: 57 ----------LVKEVNKAKDIFNFMVQRGVTHDVQ--------SYTIIINGLCKIKMVDE 98
+ ++N D++N +V++G+ +V SY + + C+I V++
Sbjct: 655 NVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRI-FVEK 713
Query: 99 ---------AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPN 149
A S++ + + I + YN LI GLC ++ A+ +++EM + P+
Sbjct: 714 LTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPS 773
Query: 150 VITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
+ + L+ LC+++ A L ++I+ Y + L+ GL G++ DA+ +
Sbjct: 774 LGSCLMLIPRLCRANKAGTAFNLAEQIDSS------YVHYALIKGLSLAGKMLDAENQLR 827
Query: 210 DILIKGYNLNVRTYSVMIDGYCK 232
+L G + + Y+VM GYCK
Sbjct: 828 IMLSNGLSSYNKIYNVMFQGYCK 850
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 127/263 (48%), Gaps = 6/263 (2%)
Query: 27 KEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDI-FNFMVQRG-VTH-DVQSY 83
++A +F M ++GL P Y L+D V A I +++ R + H ++ S
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259
Query: 84 TIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNH 143
+I LC + V EA L ++ + I ++ Y+ + G + + D + E+ +
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKY 319
Query: 144 RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKD 203
P+V N +L LC+ +RA ++++E G + + T+ +L+ C G +K
Sbjct: 320 E---PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIR 263
A +I+ KGY +V +Y+ ++ G ++GL+ ++ +M+ +G + T+ I++
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 264 ALFKKGENEKAEKLLREMVARSL 286
K + E+A++++ +M L
Sbjct: 437 GYCKARQFEEAKRIVNKMFGYGL 459
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 16 LVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRG 75
L++ L G + +A+N +M+ GL Y+ + GYC K +++ MV++
Sbjct: 809 LIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKN 868
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSL-----LNEMHSKKIIADTICYNSLIDGLCKLER 130
+ V+SY + +C A SL L E + +I YN LI + + +
Sbjct: 869 IICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVI----IYNMLIFYMFRAKN 924
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ K++ EM RG+ P+ T+N L+ S ++ + + +G++PN +
Sbjct: 925 HLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRA 984
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSV-MIDGYCKEGLFDEALILMSKMESS 249
+ LC G +K A +++Q + KG+NL +++ +G +A ++++ +
Sbjct: 985 VTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRN 1044
Query: 250 GCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
G + A Y II+ L +G + A LL M+
Sbjct: 1045 GMM--APNYDNIIKKLSDRGNLDIAVHLLNTML 1075
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 4/278 (1%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+ +N++ + CK N + + V +MV++ + ++ SY + CL + A + F
Sbjct: 839 KIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEF 898
Query: 71 -MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
++ V Y ++I + + K E +L EM + ++ D +N L+ G
Sbjct: 899 LLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSA 958
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ-PNMYTY 188
+ + ++ M +G+ PN + + LC + V +A+ L + +E +G +
Sbjct: 959 DYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQ 1018
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T +++ L G + A++ + G + Y +I G D A+ L++ M
Sbjct: 1019 TKIVETLISKGEIPKAEDFLTRVTRNG--MMAPNYDNIIKKLSDRGNLDIAVHLLNTMLK 1076
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
+ IP + +Y +I L + + +KA EMV L
Sbjct: 1077 NQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGL 1114
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE-PNIVSYSSLMDGYCLVK 59
M+ + + R+ + +LC G+VK+A +++ VM +G + V + +++
Sbjct: 970 MISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKG 1029
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
E+ KA+D + + G+ +Y II L +D A LLN M + I + Y+
Sbjct: 1030 EIPKAEDFLTRVTRNGMM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYD 1087
Query: 120 SLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ 179
S+I+GL + + A EM G+ P++ T++ L+ C++ V + LIK +
Sbjct: 1088 SVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGL 1147
Query: 180 GIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
G P+ + ++D A E+ + + GY ++ T+ +I
Sbjct: 1148 GESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDFETHWSLI 1195
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
TFN LV + + + M+ +G++PN S ++ C +V KA D++ M
Sbjct: 946 TFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVM 1005
Query: 72 VQRGV---THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+G + VQ T I+ L + +A L + ++A Y+++I L
Sbjct: 1006 ESKGWNLGSSVVQ--TKIVETLISKGEIPKAEDFLTRVTRNGMMAPN--YDNIIKKLSDR 1061
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
A L+N M P +Y+ +++ L + + +D+A+ ++ E G+ P++ T+
Sbjct: 1062 GNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
+ L+ C+ ++ +++ + + ++ G + + + +ID + E +A +M M+
Sbjct: 1122 SGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 249 SGCIPDAVTYGIII 262
G D T+ +I
Sbjct: 1182 CGYEVDFETHWSLI 1195
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 133/336 (39%), Gaps = 72/336 (21%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDG----------------- 54
TF IL+ C EG++K A + ++ +G +P++ SY++++ G
Sbjct: 360 TFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEM 419
Query: 55 ------------------YCLVKEVNKAKDIFNFMVQRGVTH------------------ 78
YC ++ +AK I N M G+
Sbjct: 420 KENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFD 479
Query: 79 ---------------DVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
+ + + NGL +D +N + + ++ + +NSLI
Sbjct: 480 PLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIV 536
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH-HVDRAIALIKKIEEQGIQ 182
+ A +L++EM G + ++ L+ LC S H+ +I+L++K + Q
Sbjct: 537 RASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQ 596
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
+ T L+ CK G + ++ IF ++ + ++ TY+ +I +CK+ ++ L +
Sbjct: 597 LDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNV 656
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++ +PD G + L +KG E+ +L
Sbjct: 657 WGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLF 692
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/271 (18%), Positives = 119/271 (43%), Gaps = 5/271 (1%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N+L+ + + N E V M +G+ P+ +++ L+ GY + + + + M+
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKI-IADTICYNSLIDGLCKLERS 131
+G+ + +S + + LC V +A L M SK + ++ +++ L
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031
Query: 132 FDAWKLVNEMNHRG-IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
A + + G + PN Y+ ++ L ++D A+ L+ + + P +Y
Sbjct: 1032 PKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSG 250
+++GL + +L A + +++ G + ++ T+S ++ +C+ E+ L+ M G
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
Query: 251 CIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
P + +I + KA +++ M
Sbjct: 1149 ESPSQEMFKTVIDRFRVEKNTVKASEMMEMM 1179
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 139/277 (50%), Gaps = 15/277 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKE-AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVK 59
M+ + + + TF L+ L ++G K + +VK GL N+ ++L+ Y L
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCG 184
Query: 60 EVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYN 119
++ A+ +F+ R DV S+ ++I+G ++K +E+ LL EM + +++ T
Sbjct: 185 LMDMARGVFD----RRCKEDVFSWNLMISGYNRMKEYEESIELLVEME-RNLVSPTSVTL 239
Query: 120 SLIDGLCKLERSFDAWKLVNE-MNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
L+ C + D K V+E ++ P++ N L++ +D A+ + + ++
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 179 QGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDE 238
+ ++ ++T ++ G + G LK A+ F + ++ + ++++MIDGY + G F+E
Sbjct: 300 R----DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNE 351
Query: 239 ALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
+L + +M+S+G IPD T ++ A G E E
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE 388
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 118/257 (45%), Gaps = 12/257 (4%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V ++ +V+ + GN+K A+ F M + + +S++ ++DGY N++ +IF
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIF 356
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M G+ D + ++ + ++ + + KI D + N+LID K
Sbjct: 357 REMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC 416
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
S A K+ ++M+ R + T+ ++ L + AI + ++++ IQP+ TY
Sbjct: 417 GCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITY 472
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGY-NLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
++ G + A++ F + ++ Y M+D + GL EA ++ KM
Sbjct: 473 LGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP 532
Query: 248 SSGCIPDAVTYGIIIRA 264
+ P+++ +G ++ A
Sbjct: 533 MN---PNSIVWGALLGA 546
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 10/285 (3%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+V T+ ++ ++G+V+ A + +M +G+ PN V+ +SL+ +VN K +
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+ V++ V D+ T +I+ K K VD L + S T ++++I G +
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVD----LCFRVFSGASKYHTGPWSAIIAGCVQN 398
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
E DA L M + PN+ T N LL + +A+ + + + G ++
Sbjct: 399 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
T L+ K G L+ A +IF I K + +V + +I GY G AL + +M
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM------VARSLH 287
SG P+ +T+ + A G E+ L R M +ARS H
Sbjct: 519 SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH 563
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 1/187 (0%)
Query: 26 VKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTI 85
V +A +F M ++ +EPNI + +SL+ Y + ++ +A +I ++ + G + + T
Sbjct: 401 VSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATG 460
Query: 86 IINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRG 145
+++ K ++ A + N + K D + + +LI G +A ++ EM G
Sbjct: 461 LVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG 520
Query: 146 IPPNVITYNPLLDVLCKSHHVDRAIALIK-KIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
+ PN IT+ L+ S V+ + L + +E YT ++D L + GRL +A
Sbjct: 521 VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 205 QEIFQDI 211
+ I
Sbjct: 581 YNLITTI 587
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLE--PNIVSYSSLMDGYCLVKEVNKAKDIFN 69
++NI++ +EG +A +VF MV +G++ P+ +Y + +K + +
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+++ D ++ V+ A + + M ++ D I +N++I G +
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR----DVISWNTMISGYYRNG 197
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
DA + + M + + + T +L V ++ + K +EE+ + +
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKN 257
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESS 249
L++ K GR+ +A+ +F + + +V T++ MI+GY ++G + AL L M+
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 250 GCIPDAVTYGIII 262
G P+AVT ++
Sbjct: 314 GVRPNAVTIASLV 326
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 131/261 (50%), Gaps = 16/261 (6%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++++V + L++ K G ++A +VF MV + + ++S++ G+ + A
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFAQNSRSDVAL 245
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
++F M + G + + T ++ + +++ + +H K D I N+L+D
Sbjct: 246 ELFKRMKRAGFIAEQATLTSVLRACTGLALLE--LGMQAHVHIVKYDQDLILNNALVDMY 303
Query: 126 CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
CK DA ++ N+M R +VIT++ ++ L ++ + A+ L ++++ G +PN
Sbjct: 304 CKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN-VRT-YSVMIDGYCKEGLFDEALILM 243
T ++ G L+D F+ + K Y ++ VR Y MID K G D+A+ L+
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRS-MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 244 SKMESSGCIPDAVTYGIIIRA 264
++ME C PDAVT+ ++ A
Sbjct: 419 NEME---CEPDAVTWRTLLGA 436
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++ ++ A K ++A + +M++ + PN+ +YSS++ + N D+
Sbjct: 127 VISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVL------RSCNGMSDVRM 180
Query: 70 F---MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+++ G+ DV + +I+ K+ ++A S+ +EM + D I +NS+I G
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWNSIIGGFA 236
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ RS A +L M G T +L +AL+ E G+Q +++
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT-------GLALL----ELGMQAHVH 285
Query: 187 TY---------TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
L+D CK G L+DA +F + + +V T+S MI G + G
Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQ 341
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
EAL L +M+SSG P+ +T ++ A G E R M
Sbjct: 342 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 99/226 (43%), Gaps = 11/226 (4%)
Query: 56 CLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADT 115
C +++ +A + + G+ D +Y+ +I + V E + ++
Sbjct: 37 CYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 116 ICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKK 175
N LI+ K DA +L ++M R NVI++ ++ K +A+ L+
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVL 152
Query: 176 IEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGL 235
+ ++PN+YTY+ ++ + D + + I+ +G +V S +ID + K G
Sbjct: 153 MLRDNVRPNVYTYSSVLRS---CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 236 FDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
++AL + +M + DA+ + II + ++ A +L + M
Sbjct: 210 PEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRM 251
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 130/278 (46%), Gaps = 20/278 (7%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
VRT LV K G +++A++VF MV E +IV++S+++ GY + ++F
Sbjct: 249 VRT--TLVNLYAKCGKMEKARSVFDSMV----EKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK-- 127
M+Q + D S ++ + +D ++ + + + + N+LID K
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 128 -LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ R F+ +K + E +++ N + L K+ HV + A+ + E+ GI P+
Sbjct: 363 AMARGFEVFKEMKE-------KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDI-LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
T+ L+ G G ++D F I + V Y M+D + + G+ D+A L+
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M P+A+ +G ++ + + AE +L+E++A
Sbjct: 476 MPMR---PNAIVWGALLSGCRLVKDTQLAETVLKELIA 510
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 95/250 (38%), Gaps = 43/250 (17%)
Query: 43 PNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSL 102
PNI Y+SL++G+ ++ D+F + + G+ ++ +++ + L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 103 LNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCK 162
+ + D SL+ R DA KL +E+ R +V+T+ L
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----SVVTWTALFSGYTT 189
Query: 163 SHHVDRAIALIKKIEEQGIQP-----------------------------------NMYT 187
S AI L KK+ E G++P N +
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
T L++ K G+++ A+ +F ++ K ++ T+S MI GY E + L +M
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEK----DIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 248 SSGCIPDAVT 257
PD +
Sbjct: 306 QENLKPDQFS 315
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 8/255 (3%)
Query: 29 AKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIIN 88
K + +++K E + SSL+D Y EV A+ +F+ + ++ D+ + +I+
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMIS 191
Query: 89 GLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPP 148
G DEA +L+ +M I D I +N+LI G + +++ M G P
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKP 251
Query: 149 NVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIF 208
+V+++ ++ L + ++A K++ G+ PN T L+ + +K +EI
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 209 QDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKK 268
++ G + S ++D Y K G EA+IL K VT+ +I
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANH 367
Query: 269 GENEKAEKLLREMVA 283
G +KA +L +M A
Sbjct: 368 GLADKAVELFDQMEA 382
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 49/271 (18%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
FN ++ EA N+ M G++P+++++++L+ G+ ++ K +I M
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC 245
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G DV S+T II+GL +H+ + E++F
Sbjct: 246 LDGYKPDVVSWTSIISGL---------------VHN-----------------FQNEKAF 273
Query: 133 DAWKLVNEMNHRGIPPN---VITYNPLLDVLCKSHHVD--RAIALIKKIEEQGIQPNMYT 187
DA+K +M G+ PN +IT P L H +++ +E+ G +
Sbjct: 274 DAFK---QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHG-----FV 325
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
+ L+D K G + +A +F+ K T++ MI Y GL D+A+ L +ME
Sbjct: 326 RSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSMIFCYANHGLADKAVELFDQME 381
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLL 278
++G D +T+ I+ A G + + L
Sbjct: 382 ATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 117/283 (41%), Gaps = 22/283 (7%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M L I +V T+N L+ N ++ + +M G +P++VS++S++ G +
Sbjct: 209 MKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQ 268
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD----TI 116
KA D F M+ G+ + + ++ + + E+H ++
Sbjct: 269 NEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHG----KEIHGYSVVTGLEDHGF 324
Query: 117 CYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHH--VDRAIALIK 174
++L+D K +A L + + +T+N + + C ++H D+A+ L
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTPKK----TTVTFNSM--IFCYANHGLADKAVELFD 378
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRT--YSVMIDGYCK 232
++E G + + T+T ++ G Q +F ++ Y + R Y+ M+D +
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL-LMQNKYRIVPRLEHYACMVDLLGR 437
Query: 233 EGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAE 275
G EA ++ M PD +G ++ A G E A
Sbjct: 438 AGKLVEAYEMIKAMRME---PDLFVWGALLAACRNHGNMELAR 477
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 7 DAEVRTFNILVEALCKEGNV-KEAKNVFAVMVKQG-LEPNIVSYSSLMDGYCLVKEVNKA 64
D V ++ L+ K N+ EA N+F+ M+ QG +EPN ++SS + +
Sbjct: 333 DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVG 392
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDG 124
K + +RG+ + +I+ K +++A + K +++ YN+ +DG
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS----YNTFLDG 448
Query: 125 LCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
C+ A+KL++E+ R + + T+ LL + + + + ++ + G+ N
Sbjct: 449 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 508
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
L+ K G + A +F + N NV +++ MI G+ K G L +
Sbjct: 509 QPVCNALISMYSKCGSIDTASRVFNFM----ENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 245 KMESSGCIPDAVTYGIIIRA 264
+M G P+ VTY I+ A
Sbjct: 565 QMIEEGVKPNEVTYVAILSA 584
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ C+ N ++A + + + ++ L + +++SL+ G V + K + I + +
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V+ G++ + +I+ K +D A + N M ++ +I+ + S+I G K +
Sbjct: 501 VKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVIS----WTSMITGFAKHGFA 556
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI-EEQGIQPNMYTYTV 190
+ N+M G+ PN +TY +L V + E+ I+P M Y
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTY 223
++D LC+ G L DA E + + L RT+
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTF 649
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ +++ + G +EA F MV G E + + SS+ ++ ++ K + +
Sbjct: 234 VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHS 293
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIK-MVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK- 127
+ ++ G+ DV+ + + C VD+ + + M +++ + +LI G K
Sbjct: 294 WAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS----WTALITGYMKN 349
Query: 128 LERSFDAWKLVNEMNHRG-IPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMY 186
+ +A L +EM +G + PN T++ ++ + ++G+ N
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 187 TYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKM 246
++ K R++DAQ F+ + K N+ +Y+ +DG C+ F++A L+S++
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRNLNFEQAFKLLSEI 465
Query: 247 ESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
A T+ ++ + G K E++ ++V
Sbjct: 466 TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 23/241 (9%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N ++ K +++A+ F + E N+VSY++ +DG C +A + + + +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLS----EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICY----NSLIDGLCKLE 129
R + ++ +++G+ + + + ++HS+ + C N+LI K
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKG----EQIHSQVVKLGLSCNQPVCNALISMYSKCG 523
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
A ++ N M +R NVI++ ++ K R + ++ E+G++PN TY
Sbjct: 524 SIDTASRVFNFMENR----NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 190 VLMDGLCKVGRLKDA----QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
++ VG + + +++D IK + Y+ M+D C+ GL +A ++
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKP---KMEHYACMVDLLCRAGLLTDAFEFINT 636
Query: 246 M 246
M
Sbjct: 637 M 637
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 43/215 (20%)
Query: 3 LQCIDAEVRTFNILVEALCKEGN--------VKEAKNVFAVMVKQGLEPNIVSYSSLMDG 54
L+C +RT++IL +AL GN ++ +++F MV G+EP++ + + L+ G
Sbjct: 239 LEC-RPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKG 297
Query: 55 YCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIAD 114
Y L VN A IF+ Q V +D + +
Sbjct: 298 YVLSLHVNDALRIFH---QMSVVYDCE-------------------------------PN 323
Query: 115 TICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIK 174
+ Y+ LI GLC R+ +A +L++EM +G PN +YN L++ S +D A+ +
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 175 KIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQ 209
++ E G + +Y L+D C+ G+ +A + +
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 117/260 (45%), Gaps = 48/260 (18%)
Query: 67 IFNFMVQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+FN+ Q+ TH+ SY I I L KM E ++N++ S + I + YNS+I
Sbjct: 158 LFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYF 217
Query: 126 CK---LERSFDAWK-------------------------------------------LVN 139
K L R+ + ++ L
Sbjct: 218 TKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFR 277
Query: 140 EMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE-QGIQPNMYTYTVLMDGLCKV 198
+M GI P+V N L+ S HV+ A+ + ++ +PN +TY L+ GLC
Sbjct: 278 QMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQ 337
Query: 199 GRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTY 258
GR +A+E+ ++ KG+ N ++Y+ +++ + G D+A+ + +M +G + D ++Y
Sbjct: 338 GRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISY 397
Query: 259 GIIIRALFKKGENEKAEKLL 278
++ +KG+ ++A +LL
Sbjct: 398 RTLVDESCRKGKYDEATRLL 417
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T++ L+ LC +G A+ + + M +G PN SY+SL++ + L E++ A M
Sbjct: 326 TYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEM 385
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
++ G D SY +++ C+ DEA LL EM +K + D Y+ L++ L K
Sbjct: 386 IENGRVVDFISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVNVLHK 440
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 42 EPNIVSYSSLMDGYCLVKEVNKAKDIFNFM-------VQRGVTH-DVQSYTIIINGLCKI 93
+P +V +L D +++ +I+N + Q + H V+ + IIN + K
Sbjct: 41 KPKLVKTQTLPDPSVYTRDI--VSNIYNILKYSNWDSAQEQLPHLGVRWDSHIINRVLKA 98
Query: 94 -KMVDEAWSLLN-EMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVI 151
+ +AW N K D Y +++D + R + + + M +G+ + +
Sbjct: 99 HPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTV 158
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
TY L+ + S VD A+ L +++ + G +P + +YT M L GR+++A E+++++
Sbjct: 159 TYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEM 218
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
L + N TY+V+++ G +EAL + KM+ G PD I+I K GE
Sbjct: 219 LRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGET 278
Query: 272 EKAEKLL 278
++L
Sbjct: 279 SFMTRVL 285
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 155 PLLDVLCKSHHVDRAIALIKKIEE-----------QGIQPNMYTYTVLMDGLCKVGRLKD 203
P L V SH ++R + +++ +G + + +TYT ++D + GR++
Sbjct: 81 PHLGVRWDSHIINRVLKAHPPMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQS 140
Query: 204 AQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIR 263
+F + KG ++ TY+ +I G D A+ L +M +GC P V+Y ++
Sbjct: 141 MYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMK 200
Query: 264 ALFKKGENEKAEKLLREMV 282
LF G E+A ++ +EM+
Sbjct: 201 MLFADGRVEEATEVYKEML 219
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%)
Query: 39 QGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDE 98
+G + + +Y++++D + + +F+ M ++GV D +YT +I+ + VD
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 99 AWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLD 158
A L EM + Y + + L R +A ++ EM + PN TY L++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 159 VLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVG 199
L + + A+ + K++E G+QP+ +L+ K G
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFG 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 129/333 (38%), Gaps = 57/333 (17%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ + T+ +L+E L G +EA ++F M + G++P+ + + L+ E
Sbjct: 218 MLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ + +M + GV V Y I + L +K E+ LL E++S I +++C +
Sbjct: 278 TSFMTRVLVYMKENGV---VLRYPIFVEALETLKAAGESDDLLREVNSH-ISVESLCSSD 333
Query: 121 L-------------------IDGLCKLERSFDAWK-LVNEMNHRGIPPNVITYNPLLDVL 160
+ I + ++++ A L+N+M R I + + +++
Sbjct: 334 IDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDILLNQMRDRNIKLDSFVVSAIIETN 393
Query: 161 CKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLN- 219
C + A E GI Y L+ + L E+ ++++ ++L
Sbjct: 394 CDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQHSLGC 453
Query: 220 --------------------------------VRTYSVMIDGYCKEGLFDEALILMSKME 247
V Y+ ++D Y G ++A+ ++ +M
Sbjct: 454 YQGAMLIHRLGFGRRPRLAADVFDLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMR 513
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLRE 280
+P TY +++ L K + +K LLR+
Sbjct: 514 EREIMPSLGTYDVLLSGLEKTSDFQKEVALLRK 546
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 11/280 (3%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D +V T+ +++ + G+ EA F M K G+ N ++ S++ V++V +
Sbjct: 166 DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 67 IFNFMVQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ ++ G V DV + +++ K D+A + +EM S+ ++ + +LI G
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVT----WTALIAGY 281
Query: 126 CKLERSFDAWKLV-NEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPN 184
+ R FD LV EM + PN T + +L + R + + + I+ N
Sbjct: 282 VQ-SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEIN 340
Query: 185 MYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMS 244
T L+D K G L++A +F+ + + NV T++ MI+G+ G +A L
Sbjct: 341 TTAGTTLIDLYVKCGCLEEAILVFERL----HEKNVYTWTAMINGFAAHGYARDAFDLFY 396
Query: 245 KMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
M SS P+ VT+ ++ A G E+ +L M R
Sbjct: 397 TMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 121/280 (43%), Gaps = 15/280 (5%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLE-PNIVSYSSLMDGYCLVKEVNKA 64
+D++ N L+ G A +F G E ++V++++++DG+ ++A
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLF-----DGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 65 KDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLN-EMHSKKIIADTICYNSLID 123
F M + GV + + ++ K++ V S+ + + ++ D +SL+D
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
K DA K+ +EM R NV+T+ L+ +S D+ + + +++ + + P
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAP 304
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N T + ++ VG L + + ++ +N + +ID Y K G +EA+++
Sbjct: 305 NEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
++ + T+ +I G A L M++
Sbjct: 365 ERLHEK----NVYTWTAMINGFAAHGYARDAFDLFYTMLS 400
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 111/255 (43%), Gaps = 16/255 (6%)
Query: 36 MVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF---MVQRGVTHDVQSYTIIINGLCK 92
M + G+ P+ ++ L+ +++ N F F +V+ G+ D +I+G
Sbjct: 95 MRRNGVIPSRHTFPPLLKAVFKLRDSNP----FQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 93 IKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVIT 152
+ D A L + K D + + ++IDG + + +A EM G+ N +T
Sbjct: 151 SGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 153 YNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
+L K V ++ E G ++ +++ + L+D K DAQ++F ++
Sbjct: 207 VVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEM 266
Query: 212 LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGEN 271
+ NV T++ +I GY + FD+ +++ +M S P+ T ++ A G
Sbjct: 267 PSR----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Query: 272 EKAEKLLREMVARSL 286
+ ++ M+ S+
Sbjct: 323 HRGRRVHCYMIKNSI 337
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V T+ L+ + + VF M+K + PN + SS++ V +++ + +
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+M++ + + + T +I+ K ++EA + +H K + + ++I+G
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT----WTAMINGFAAHG 386
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GIQPNMYTY 188
+ DA+ L M + PN +T+ +L V+ L ++ + ++P Y
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNL 218
++D + G L++A+ + + + ++ N+
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 123/273 (45%), Gaps = 7/273 (2%)
Query: 9 EVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
+ ++N+++ L G EA +VF+ M G P+ +S SL+ +++ I
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIH 394
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
+++++ G D+ T+ + L + + N + AD++ +N+++ +
Sbjct: 395 SYIIKWGFLADL---TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 129 ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTY 188
E+ + +L M P+ IT LL + + + + G+ P +
Sbjct: 452 EQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 189 TVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMES 248
L+D K G L A+ IF + N +V ++S +I GY + G +EALIL +M+S
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSM----DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS 567
Query: 249 SGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+G P+ VT+ ++ A G E+ KL M
Sbjct: 568 AGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 9/237 (3%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T L+ + ++K V +K GL P + L+D Y + +A+ IF+ M
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
R DV S++ +I G + +EA L EM S I + + + ++ +
Sbjct: 535 DNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLV 590
Query: 132 FDAWKLVNEM-NHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ KL M GI P + ++D+L ++ ++ A + I+E ++P++ +
Sbjct: 591 EEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAE---RFIDEMKLEPDVVVWKT 647
Query: 191 LMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
L+ G + AQ+ ++IL K N + ++ + G ++ A +L S M+
Sbjct: 648 LLSACKTQGNVHLAQKAAENIL-KIDPFNSTAHVLLCSMHASSGNWENAALLRSSMK 703
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 93/206 (45%), Gaps = 5/206 (2%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+A+ ++N ++ A + E +F +M+ EP+ ++ +L+ G + +
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 67 IFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLC 126
+ + ++ G+ + +I+ K + +A + + M ++ D + +++LI G
Sbjct: 495 VHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYA 550
Query: 127 KLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE-EQGIQPNM 185
+ +A L EM GI PN +T+ +L V+ + L ++ E GI P
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDI 211
+ ++D L + GRL +A+ ++
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEM 636
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 11 RTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
R ++LV G +++A +F G+ PN SY+ LM +CL +++ A +F
Sbjct: 159 RILDVLV---SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGK 215
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
M++R V DV SY I+I G C+ V+ A LL++M +K + D +LI GLC
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGM 271
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTV 190
+ K + EM +G P+ N L+ C V+ A +++ + + G + T+ +
Sbjct: 272 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 331
Query: 191 LMDGLC 196
++ +C
Sbjct: 332 VIPLIC 337
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 14/229 (6%)
Query: 64 AKDIFNFMVQR-GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK--KIIADTICYNS 120
AK+IF++ Q+ H S+ I+I L + + + +L + S + + Y
Sbjct: 67 AKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLI 126
Query: 121 LIDGLCKL-ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH--HVDRAIALIKKIE 177
+ KL E+ + + E N P ++ N +LDVL SH ++ +A L K
Sbjct: 127 KVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL---NRILDVLV-SHRGYLQKAFELFKSSR 182
Query: 178 EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFD 237
G+ PN +Y +LM C L A ++F +L + +V +Y ++I G+C++G +
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 238 EALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
A+ L+ M + G +PD +I L +G ++ +K L EM+++
Sbjct: 243 GAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGF 287
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 3 LQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVN 62
L + R++N+L++A C ++ A +F M+++ + P++ SY L+ G+C +VN
Sbjct: 183 LHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 63 KAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
A ++ + M+ +G D +I GLC M DE L EM SK N L+
Sbjct: 243 GAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 298
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
G C + +A +V + G + T+ ++ ++C ++
Sbjct: 299 KGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 110/236 (46%), Gaps = 5/236 (2%)
Query: 48 YSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIK-MVDEAWSLLNEM 106
++ L+ Y K K F M++ T + I++ L + + +A+ L
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 107 HSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHV 166
++ +T YN L+ C + A++L +M R + P+V +Y L+ C+ V
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 167 DRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVM 226
+ A+ L+ + +G P+ L+ GLC G + ++ ++++ KG++ + + +
Sbjct: 242 NGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 297
Query: 227 IDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMV 282
+ G+C G +EA ++ + +G + T+ ++I + + E+EK + L + V
Sbjct: 298 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 101/218 (46%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V FNIL+ A K G + + M +GL+P +++++ E A IF
Sbjct: 423 VSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
MV G V SY +++ L K K+ DEA+ + N M I + Y ++ L +
Sbjct: 483 AMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYT 189
+ L+ EM +GI P+V+T+N ++ ++ A +++ + ++PN TY
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 190 VLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMI 227
+L++ L + + A E+ +G L+ + Y ++
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 28/252 (11%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ + K A ++ ++ +G EPN +SY ++ + ++ + I+ + V+
Sbjct: 385 NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVR 444
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
LLN+M K + +N+++ K +
Sbjct: 445 ----------------------------LLNKMEDKGLKPQRRHWNAVLVACSKASETTA 476
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A ++ M G P VI+Y LL L K D A + + + GI+PN+Y YT +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
L + + +++ KG +V T++ +I G + GL A +M+S P
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 254 DAVTYGIIIRAL 265
+ +TY ++I AL
Sbjct: 597 NEITYEMLIEAL 608
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 36/301 (11%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+N L+ A+ G EA+ + M ++G+ PNIV+Y++LM Y E KA I +
Sbjct: 190 YNSLLGAMRGFG---EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTK 246
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSL-----LNEMHSKKIIADTICYN-------- 119
++G + +Y+ + L +M D +L L E ++K+ I + + Y+
Sbjct: 247 EKGFEPNPITYSTAL--LVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKL 304
Query: 120 -SLIDGLC-KLERSF----DAW-----KLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDR 168
+ I +C ++ R + D W KL+N M+ G+ P+ + L+ + H
Sbjct: 305 ENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIV 364
Query: 169 AIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKG-------YNLNVR 221
L K+I E+ + ++ L+ + K + A EI++D+L +G Y L V
Sbjct: 365 GKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVS 424
Query: 222 TYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+++++ K G++ + L++KME G P + ++ A K E A ++ + M
Sbjct: 425 HFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAM 484
Query: 282 V 282
V
Sbjct: 485 V 485
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 135/345 (39%), Gaps = 74/345 (21%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF--- 68
T+N L+ +EG +A + + ++G EPN ++YS+ + Y +++ A + F
Sbjct: 221 TYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVEL 280
Query: 69 -NFMVQRGVTHDVQS-----------------YTIIINGLCKIKMVDEAWS-----LLNE 105
+R + +DV Y ++ L K D+ W+ LLN
Sbjct: 281 REKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVK----DDNWTTRVLKLLNA 336
Query: 106 MHSKKI------------------------------------IADTICYNSLIDGLCKLE 129
M S + I+ ++C N LI + K +
Sbjct: 337 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVC-NHLIWLMGKAK 395
Query: 130 RSFDAWKLVNEMNHRGIPPNVITY-------NPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
+ + A ++ ++ G PN ++Y N LL K + L+ K+E++G++
Sbjct: 396 KWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLK 455
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
P + ++ K A +IF+ ++ G V +Y ++ K L+DEA +
Sbjct: 456 PQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRV 515
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
+ M G P+ Y + L + + + LL+EM ++ +
Sbjct: 516 WNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIE 560
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 11/120 (9%)
Query: 80 VQSYTIIINGLCKIKMVDEAWSLLNEMHSKK------IIADTICYNSLIDGLCKLERSF- 132
+Q + +I G K K + A ++++ + KK I + YNSL+ + R F
Sbjct: 146 LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFIYNSLLGAM----RGFG 201
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A K++ +M GI PN++TYN L+ + + +A+ ++ +E+G +PN TY+ +
Sbjct: 202 EAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTAL 261
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 124/235 (52%), Gaps = 25/235 (10%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
+ L+ K G + EA+ +F VM E NIV+ ++++ GY + +N+A +F
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMP----ERNIVTCNAMLTGYVKCRRMNEAWTLF---- 131
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
R + +V S+T+++ LC ++A L +EM + +++ +N+L+ GL +
Sbjct: 132 -REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS----WNTLVTGLIRNGDME 186
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A ++ + M R +V+++N ++ ++ ++ A L + E+ N+ T+T ++
Sbjct: 187 KAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVVTWTSMV 238
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
G C+ G +++A +F ++ + N+ +++ MI G+ L+ EAL+L +M+
Sbjct: 239 YGYCRYGDVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMK 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Query: 64 AKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLID 123
A+ + + + QRG + V +T +++ K +DEA L M + I+ C N+++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVT---C-NAMLT 116
Query: 124 GLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQP 183
G K R +AW L EM P NV+++ +L LC + A+ L ++ E+
Sbjct: 117 GYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPER---- 167
Query: 184 NMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILM 243
N+ ++ L+ GL + G ++ A+++F + + +V +++ MI GY + +EA +L
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLF 223
Query: 244 SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
M + VT+ ++ + G+ +A +L EM R++
Sbjct: 224 GDMSEK----NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 11/210 (5%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
D + T+ +++ L + EA ++ + MV+ GL+P +YS L+ +++ K
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 67 IFNFMVQRGVTHDVQSYTIIINGL----CKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
I + + +D I+ N L K +++A+ E+ +K + DT+ +NS+I
Sbjct: 488 IHCVIAKTTACYDPD--LILQNSLVSMYAKCGAIEDAY----EIFAKMVQKDTVSWNSMI 541
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQ-GI 181
GL + A L EM G PN +T+ +L S + R + L K ++E I
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSI 601
Query: 182 QPNMYTYTVLMDGLCKVGRLKDAQEIFQDI 211
QP + Y ++D L + G+LK+A+E +
Sbjct: 602 QPGIDHYISMIDLLGRAGKLKEAEEFISAL 631
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 78 HDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKL 137
HD S+T +I+G + V A+ L ++H K D + + +I GL + E +A L
Sbjct: 398 HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASL 453
Query: 138 VNEMNHRGIPPNVITYNPLLDVLCKSHHVDRA--IALIKKIEEQGIQPNMYTYTVLMDGL 195
+++M G+ P TY+ LL + ++D+ I + P++ L+
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 196 CKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDA 255
K G ++DA EIF ++ K + +++ MI G GL D+AL L +M SG P++
Sbjct: 514 AKCGAIEDAYEIFAKMVQK----DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 256 VTYGIIIRALFKKGENEKAEKLLREM 281
VT+ ++ A G + +L + M
Sbjct: 570 VTFLGVLSACSHSGLITRGLELFKAM 595
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 35/287 (12%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN 69
V ++ +++ ALC +G ++A +F M E N+VS+++L+ G ++ KAK +F+
Sbjct: 138 VVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGDMEKAKQVFD 193
Query: 70 FMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
M R DV S+ +I G + ++EA L +M K ++ + S++ G C+
Sbjct: 194 AMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT----WTSMVYGYCRYG 245
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE--QGIQPNMYT 187
+A++L EM R N++++ ++ + A+ L ++++ + PN T
Sbjct: 246 DVREAYRLFCEMPER----NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 188 YTVLMDGLCKVG----RLKDAQEIFQDILIKGY---NLNVRTYSVMIDGYCKEGLFDEAL 240
L +G RL +++ ++ G+ + + R ++ Y GL A
Sbjct: 302 LISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 241 ILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSLH 287
L+++ D + III K G+ E+AE L + +SLH
Sbjct: 360 SLLNESF------DLQSCNIIINRYLKNGDLERAETLFERV--KSLH 398
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 77 THDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWK 136
+ D+QS IIIN K ++ A +L + S + D + + S+IDG + A+
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 137 LVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLC 196
L +++ + + +T+ ++ L ++ A +L+ + G++P TY+VL+
Sbjct: 422 LFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 197 KVGRLKDAQEIFQDI--LIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
L + I I Y+ ++ + ++ Y K G ++A + +KM D
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----D 533
Query: 255 AVTYGIIIRALFKKGENEKAEKLLREMV 282
V++ +I L G +KA L +EM+
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEML 561
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 23/278 (8%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N ++ + G K+A ++F M ++G EP+ + S++ + ++ + +
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 72 VQR--GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLE 129
+ + G++ + S I + G C +D A + N+M I D + + ++I +
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGD--LDSARRVFNQM----IKKDRVAWTAMITVYSQNG 313
Query: 130 RSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIE----EQGIQPNM 185
+S +A+KL EM G+ P+ T + +L C S A+ L K+IE E +Q N+
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSA-CGSVG---ALELGKQIETHASELSLQHNI 369
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
Y T L+D K GR+++A +F+ + +K N T++ MI Y +G EAL+L +
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDR 425
Query: 246 MESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVA 283
M P +T+ ++ A G + + EM +
Sbjct: 426 M---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 19/259 (7%)
Query: 12 TFNILVEALCKEGNVKEAK-NVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNF 70
+FN ++ L N EA +++ M GL+P+ +Y+ + ++E+ + + +
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 71 MVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLER 130
+ + G+ DV +I K V A L +E+ + DT+ +NS+I G +
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGY 213
Query: 131 SFDAWKLVNEMNHRGIPPNVITYNPLLDVLC-----KSHHVDRAIALIKKIEEQGIQPNM 185
+ DA L +M G P+ T +L ++ + +A+ KKI G+ +
Sbjct: 214 AKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI---GLSTFL 270
Query: 186 YTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSK 245
+ + M G C G L A+ +F ++ K + ++ MI Y + G EA L +
Sbjct: 271 GSKLISMYGKC--GDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 246 MESSGCIPDAVTYGIIIRA 264
ME +G PDA T ++ A
Sbjct: 325 MEKTGVSPDAGTLSTVLSA 343
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 13/269 (4%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK-DIFNFMV 72
N L+ + G+ + +F+V EPN S++ ++ G ++A ++ M
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTE----EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMK 124
Query: 73 QRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
G+ D +Y + K++ + S+ + + + D +SLI K +
Sbjct: 125 FSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVG 184
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
A KL +E+ R + +++N ++ ++ + A+ L +K+EE+G +P+ T ++
Sbjct: 185 YARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
+G L+ + + + + K L+ S +I Y K G D A + ++M
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQM----IK 296
Query: 253 PDAVTYGIIIRALFKKGENEKAEKLLREM 281
D V + +I + G++ +A KL EM
Sbjct: 297 KDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 79.3 bits (194), Expect = 3e-15, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 16/290 (5%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFA-VMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V ++N ++ A C EGNV EA V+ ++ P+ V+Y L G + A +
Sbjct: 216 VVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLL 275
Query: 69 NFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKL 128
M+ +G D Y +I G + D+A +E+ SK + D I + ++ +
Sbjct: 276 REMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEK 335
Query: 129 ---ERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNM 185
+ + ++++ + + R PP T N LL+V K D A AL ++ + PN+
Sbjct: 336 GNDKEAMESYRSLLDKKFRMHPP---TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNI 392
Query: 186 Y-----TYTVLMDGLCKVGRLKDAQEIFQ----DILIKGYNLNVRTYSVMIDGYCKEGLF 236
T ++++ K+G +A F+ + K + ++ Y ++ +C++G+
Sbjct: 393 LSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGML 452
Query: 237 DEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
EA ++ S DA ++ +I A K + A K+L MV +L
Sbjct: 453 TEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNL 502
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 69/288 (23%), Positives = 135/288 (46%), Gaps = 11/288 (3%)
Query: 10 VRTFNILVEALCKEGNVKEAKNVFAVMVKQG-LEPNIVSYSSLMDGYCLVKEVNKAKDIF 68
V T N ++ A+ + E+ ++F KQ + PN+VSY+ +++ +C V++A +++
Sbjct: 180 VFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVY 239
Query: 69 NFMVQRG-VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK 127
++ +Y + GL + + +A SLL EM SK AD+ YN+LI G
Sbjct: 240 RHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLD 299
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
L A + +E+ + + I ++ + + A+ + + ++ + + T
Sbjct: 300 LGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPT 359
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKG-----YNLNVRTYSVMIDGYCKEGLFDEALIL 242
VL++ K G+ +A +F ++L ++N T +M++ K G F EA+
Sbjct: 360 GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINT 419
Query: 243 M----SKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREMVARSL 286
SK+ S + D + Y I+ ++G +AE+ E V+RSL
Sbjct: 420 FKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSL 467
Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 119/265 (44%), Gaps = 7/265 (2%)
Query: 17 VEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFN-FMVQRG 75
V++L + ++ A + V P + + ++++ K +++ +F F Q
Sbjct: 152 VQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSN 211
Query: 76 VTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIA-DTICYNSLIDGLCKLERSFDA 134
+ +V SY IIN C VDEA + + + A ++ Y L GL + R DA
Sbjct: 212 IVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDA 271
Query: 135 WKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDG 194
L+ EM +G + YN L+ D+A+ +++ + + M+
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 195 LCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPD 254
+ G K+A E ++ +L K + ++ T +V+++ + K G DEA L ++M + P+
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 255 AV-----TYGIIIRALFKKGENEKA 274
+ T GI++ FK GE +A
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEA 416
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
T N+L+E K G EA +F M+ PNI+S +S D M
Sbjct: 359 TGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNS---------------DTVGIM 403
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V + ++ IN K+ +++ SK + D + Y +++ C+
Sbjct: 404 VNE--CFKMGEFSEAINTFKKVG---------SKVTSKPFVMDYLGYCNIVTRFCEQGML 452
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A + E R +P + ++ ++D K+ +D A+ ++ ++ + ++ +
Sbjct: 453 TEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARV 512
Query: 192 MDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
L K G+L ++ E+ + + + Y V++ G C D+A ++ +M
Sbjct: 513 FGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNV 572
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
V II K G E+ EK+L VAR
Sbjct: 573 GVTTVLREFIIEVFEKAGRREEIEKILNS-VAR 604
Score = 55.8 bits (133), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQG-IQPNMYTYTVLM 192
A KL + P V T N ++ + ++ +I+L + +Q I PN+ +Y ++
Sbjct: 164 ASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQII 223
Query: 193 DGLCKVGRLKDAQEIFQDILIKG-YNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGC 251
+ C G + +A E+++ IL + + TY + G + G +A L+ +M S G
Sbjct: 224 NAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQ 283
Query: 252 IPDAVTYGIIIRALFKKGENEKAEKLLREMVAR 284
D+ Y +IR G+ +KA + E+ ++
Sbjct: 284 AADSTVYNNLIRGYLDLGDFDKAVEFFDELKSK 316
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 15/279 (5%)
Query: 7 DAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKD 66
+ +V ++N ++ A + G E + M KQG + + ++ ++L+ ++ K
Sbjct: 381 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ 440
Query: 67 IFNFMVQRGVTHD-VQSYTIII---NGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLI 122
F++++G+ + + SY I + +GL +I S E D +NS+I
Sbjct: 441 THAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAER-------DQATWNSMI 493
Query: 123 DGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQ 182
G + + + + +M + I PN +T +L + VD L Q +
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD 553
Query: 183 PNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALIL 242
N++ + L+D K G +K A+++F + N TY+ MI GY + G+ + A+ L
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKER----NSVTYTTMILGYGQHGMGERAISL 609
Query: 243 MSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
M+ SG PDA+T+ ++ A G ++ K+ EM
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 12/237 (5%)
Query: 1 MVLQCIDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKE 60
M+ Q I T ++ A + G+V K + ++Q L+ N+ S+L+D Y
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ A+D+F+ +R +YT +I G + M + A SL M I D I + +
Sbjct: 572 IKYAEDMFSQTKERNSV----TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVA 627
Query: 121 LIDGLCKLERSFD-AWKLVNEMNH-RGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEE 178
++ C D K+ EM I P+ Y + D+L + V+ A +K + E
Sbjct: 628 VLSA-CSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGE 686
Query: 179 QGIQPNMYTYTVLMDGLCKV-GRLKDAQEIFQDILIKGYNLNVRTYSVMIDG-YCKE 233
+G N+ + G CK+ G L+ A+ + + + N Y V++ Y +E
Sbjct: 687 EG---NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEE 740
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N L+ K G + EAK VF VM + + VS++SL+ G K++++A ++F M
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKMPG 369
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFD 133
+ D+ S+T +I G + + L M K D I + ++I +
Sbjct: 370 K----DMVSWTDMIKGFSGKGEISKCVELFGMMPEK----DNITWTAMISAFVSNGYYEE 421
Query: 134 AWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMD 193
A ++M + + PN T++ +L + + + ++ + I ++ L+
Sbjct: 422 ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS 481
Query: 194 GLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIP 253
CK G DA +IF I N+ +Y+ MI GY G +AL L S +ESSG P
Sbjct: 482 MYCKCGNTNDAYKIFSCI----SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEP 537
Query: 254 DAVTYGIIIRALFKKGENEKAEKLLREM 281
+ VT+ ++ A G + K + M
Sbjct: 538 NGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 53/290 (18%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++N L+ L + + EA +F M + ++VS++ ++ G+ E++K ++F M
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS----------L 121
++ D ++T +I+ +EA ++M K++ ++ ++S L
Sbjct: 399 PEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 122 IDGL-------------------------CKLERSFDAWKLVNEMNHRGIPPNVITYNPL 156
I+GL CK + DA+K+ + ++ PN+++YN +
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTM 510
Query: 157 LDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGY 216
+ + +A+ L +E G +PN T+ L+ VG + + F+ + Y
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS-MKSSY 569
Query: 217 NLNVRT--YSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
N+ Y+ M+D + GL D+A L+S M C P + +G ++ A
Sbjct: 570 NIEPGPDHYACMVDLLGRSGLLDDASNLISTMP---CKPHSGVWGSLLSA 616
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 123/253 (48%), Gaps = 24/253 (9%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N + + GN++EA+ +F M + +IVS+ +++ Y +++KA +F+ M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNR----SIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 74 RGVTHDVQSYTIIINGLCKIKM-VDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSF 132
R T SY +I + K K + +A+ L ++ K + + Y ++I G + R
Sbjct: 110 RVTT----SYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFD 161
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLM 192
+A L E + + + N LL ++ + A+ + + + + + + + ++
Sbjct: 162 EAEFLYAETPVKF--RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMV 215
Query: 193 DGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCI 252
G CK+GR+ DA+ +F + + NV T++ MIDGY K G F++ L +M G +
Sbjct: 216 HGYCKMGRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 253 P-DAVTYGIIIRA 264
++ T ++ +A
Sbjct: 272 KVNSNTLAVMFKA 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 14 NILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQ 73
N LV CK GN +A +F+ + EPNIVSY++++ GY KA +F+ +
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 74 RGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSK-KIIADTICYNSLIDGLCKLERSF 132
G + ++ +++ + VD W M S I Y ++D L +
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 133 DAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH-HVDRAIALIKKIEEQGIQPNMYT-YTV 190
DA L++ M + P+ + LL K+H VD A KK+ E ++P+ T Y V
Sbjct: 593 DASNLISTMPCK---PHSGVWGSLLSA-SKTHLRVDLAELAAKKLIE--LEPDSATPYVV 646
Query: 191 LMDGLCKVGRLKDAQEI 207
L +G+ +D I
Sbjct: 647 LSQLYSIIGKNRDCDRI 663
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 61 VNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNS 120
+ +A+ IF M R + S+ +I+ + + +AW + +EM + T YN+
Sbjct: 66 LQEAEAIFRQMSNRSIV----SWIAMISAYAENGKMSKAWQVFDEMP----VRVTTSYNA 117
Query: 121 LIDGL----CKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKI 176
+I + C L ++++ + + E N ++Y ++ ++ D A L +
Sbjct: 118 MITAMIKNKCDLGKAYELFCDIPE-------KNAVSYATMITGFVRAGRFDEAEFLYAET 170
Query: 177 E---EQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKE 233
+ N VL+ G + G+ +A +FQ + +K V + S M+ GYCK
Sbjct: 171 PVKFRDSVASN-----VLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKM 221
Query: 234 GLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
G +A L +M + +T+ +I FK G E L M
Sbjct: 222 GRIVDARSLFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRM 265
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 125/272 (45%), Gaps = 9/272 (3%)
Query: 13 FNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMV 72
++ L+ + + A F M + G + VS+++L++ K +K +F+ +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 73 QR--GVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCK--- 127
QR + D SY I+I C ++A ++ +M K + TI + +++ L K
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 128 LERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYT 187
LE + + W NEM +G + YN + + + +R LI+++ G++P+ +
Sbjct: 225 LEVADNLW---NEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTIS 280
Query: 188 YTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKME 247
Y LM C+ G L +A+++++ + N T+ +I C L+++ + K
Sbjct: 281 YNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSV 340
Query: 248 SSGCIPDAVTYGIIIRALFKKGENEKAEKLLR 279
IPD T ++ L + + + A+ L+R
Sbjct: 341 YMHKIPDFNTLKHLVVGLVENKKRDDAKGLIR 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
Query: 12 TFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAKDIFNFM 71
++ IL+++ C G ++A + M +G+E +++++++ E+ A +++N M
Sbjct: 176 SYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEM 235
Query: 72 VQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERS 131
V++G D +Y + I K + + L+ EM S + DTI YN L+ C+
Sbjct: 236 VKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGML 294
Query: 132 FDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVL 191
+A K+ + PN T+ L+ LC S ++ A+ KK P+ T L
Sbjct: 295 DEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHL 354
Query: 192 MDGLCKVGRLKDAQEIFQDI 211
+ GL + + DA+ + + +
Sbjct: 355 VVGLVENKKRDDAKGLIRTV 374
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 85 IIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHR 144
+ + L K + + +L+ + I + Y++LI + A + +M+
Sbjct: 72 LTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQY 131
Query: 145 GIPPNVITYNPLLDVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDA 204
G P + +++N LL+ S + D+ L +I P Y
Sbjct: 132 GTPRSAVSFNALLNACLHSKNFDKVPQLFDEI------PQRY------------------ 167
Query: 205 QEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRA 264
+I D + +Y ++I YC G ++A+ +M +M+ G + + I+ +
Sbjct: 168 NKIIPDKI---------SYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 265 LFKKGENEKAEKLLREMVAR 284
L+KKGE E A+ L EMV +
Sbjct: 219 LYKKGELEVADNLWNEMVKK 238
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 41 LEPNIVSYSSLMDGYCLVKEVNKAKDIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAW 100
LEP++V Y+++++ K+ A + + QRG +Y +I+ ++ + E +
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIM----EVMLACEKY 644
Query: 101 SLLNEMH---SKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLL 157
+L++E K I + + Y L++ L K +S +A V +M RGI + Y L
Sbjct: 645 NLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 158 DVLCKSHHVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYN 217
LC + + + ++KKI +P + TYT L+ G +K+A IF D + K +
Sbjct: 705 RCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIF-DQMKKVCS 763
Query: 218 LNVRTYSVMIDGYCKEGLFDEALILMSKMESSG------------CIPDAVTYGIIIRAL 265
N+ T ++M+ Y + GLF+EA L KM G +PD T+ ++
Sbjct: 764 PNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTC 823
Query: 266 FKKGENEKAEKL---LREMVARSLH 287
E EK + REM+ H
Sbjct: 824 ---AEQEKWDDFGYAYREMLRHGYH 845
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 122/311 (39%), Gaps = 50/311 (16%)
Query: 6 IDAEVRTFNILVEALCKEGNVKEAKNVFAVMVKQGLEPNIVSYSSLMDGYCLVKEVNKAK 65
++ +V +N ++ A + + A V + ++G +P+ V+Y +M+ ++ N
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 66 DIFNFMVQRGVTHDVQSYTIIINGLCKIKMVDEAWSLLNEMHSKKIIADTICYNSLIDGL 125
+ F M Q+ + +Y +++N L K DEA + +M S+ I+ Y L L
Sbjct: 649 EFFRKM-QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 126 CKLERSFDAWKLVNEM----------NHRGI------------------------PPNVI 151
C R + ++ ++ + G+ PN++
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 767
Query: 152 TYNPLLDVLCKSHHVDRAIALIKKIEEQG------------IQPNMYTYTVLMDGLCKVG 199
T N +L + + A L +K+ E G + P+ YT+ ++D +
Sbjct: 768 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQE 827
Query: 200 RLKDAQEIFQDILIKGYNLNVRTYSVMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYG 259
+ D ++++L GY+ N + + M+ + G + M S IP +
Sbjct: 828 KWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPS---P 884
Query: 260 IIIRALFKKGE 270
+I F+K E
Sbjct: 885 LIKERFFRKLE 895
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 83/177 (46%), Gaps = 1/177 (0%)
Query: 105 EMHSKKIIADTICYNSLIDGLCKLERSFDAWKLVNEMNHRGIPPNVITYNPLLDVLCKSH 164
E ++ D + YN++++ + ++ A+ ++ ++ RG P+ +TY +++V+
Sbjct: 583 EKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACE 642
Query: 165 HVDRAIALIKKIEEQGIQPNMYTYTVLMDGLCKVGRLKDAQEIFQDILIKGYNLNVRTYS 224
+ +K+++ I PN Y VL++ L K G+ +A +D+ +G + Y
Sbjct: 643 KYNLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYY 701
Query: 225 VMIDGYCKEGLFDEALILMSKMESSGCIPDAVTYGIIIRALFKKGENEKAEKLLREM 281
+ C G +E L ++ K+ P VTY +I+A G + A + +M
Sbjct: 702 DLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQM 758