Miyakogusa Predicted Gene

Lj1g3v3194560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3194560.1 Non Chatacterized Hit- tr|I3STQ8|I3STQ8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Ribosomal_L23,Ribosomal protein L25/L23;
Ribosomal_L23eN,Ribosomal protein L23/L25, N-terminal;
L23_,CUFF.30185.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55280.2 | Symbols: RPL23AB | ribosomal protein L23AB | chr3:...   180   3e-46
AT3G55280.1 | Symbols: RPL23AB | ribosomal protein L23AB | chr3:...   180   3e-46
AT3G55280.3 | Symbols: RPL23AB | ribosomal protein L23AB | chr3:...   180   3e-46
AT2G39460.2 | Symbols: ATRPL23A, RPL23A, RPL23AA | ribosomal pro...   180   4e-46
AT2G39460.1 | Symbols: ATRPL23A, RPL23A, RPL23AA | ribosomal pro...   180   4e-46

>AT3G55280.2 | Symbols: RPL23AB | ribosomal protein L23AB |
           chr3:20500667-20501519 FORWARD LENGTH=154
          Length = 154

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 94/116 (81%)

Query: 40  RTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFXX 99
           RT VTFHRPKTLT  R PKYP+ISATPRNKLDHYQILK+PLTTESAMKKIEDNNTLVF  
Sbjct: 39  RTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIV 98

Query: 100 XXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
                          MYDIQ KKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 99  DIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>AT3G55280.1 | Symbols: RPL23AB | ribosomal protein L23AB |
           chr3:20500667-20501519 FORWARD LENGTH=154
          Length = 154

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 94/116 (81%)

Query: 40  RTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFXX 99
           RT VTFHRPKTLT  R PKYP+ISATPRNKLDHYQILK+PLTTESAMKKIEDNNTLVF  
Sbjct: 39  RTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIV 98

Query: 100 XXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
                          MYDIQ KKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 99  DIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>AT3G55280.3 | Symbols: RPL23AB | ribosomal protein L23AB |
           chr3:20500667-20501519 FORWARD LENGTH=148
          Length = 148

 Score =  180 bits (457), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 94/116 (81%)

Query: 40  RTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFXX 99
           RT VTFHRPKTLT  R PKYP+ISATPRNKLDHYQILK+PLTTESAMKKIEDNNTLVF  
Sbjct: 33  RTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIV 92

Query: 100 XXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
                          MYDIQ KKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 93  DIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 148


>AT2G39460.2 | Symbols: ATRPL23A, RPL23A, RPL23AA | ribosomal
           protein L23AA | chr2:16475049-16475904 FORWARD
           LENGTH=154
          Length = 154

 Score =  180 bits (456), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 94/116 (81%)

Query: 40  RTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFXX 99
           RT VTFHRPKTLTK R  KYP+ISATPRNKLDHYQILK+PLTTESAMKKIEDNNTLVF  
Sbjct: 39  RTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIV 98

Query: 100 XXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
                          MYDIQ KKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 99  DIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>AT2G39460.1 | Symbols: ATRPL23A, RPL23A, RPL23AA | ribosomal
           protein L23AA | chr2:16475049-16475904 FORWARD
           LENGTH=154
          Length = 154

 Score =  180 bits (456), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 92/116 (79%), Positives = 94/116 (81%)

Query: 40  RTTVTFHRPKTLTKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFXX 99
           RT VTFHRPKTLTK R  KYP+ISATPRNKLDHYQILK+PLTTESAMKKIEDNNTLVF  
Sbjct: 39  RTKVTFHRPKTLTKPRTGKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIV 98

Query: 100 XXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155
                          MYDIQ KKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 99  DIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154