Miyakogusa Predicted Gene

Lj1g3v3182240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3182240.1 Non Chatacterized Hit- tr|B8B7I9|B8B7I9_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,42.86,7e-16,seg,NULL,CUFF.30151.1
         (366 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13100.1 | Symbols:  | unknown protein; Has 1807 Blast hits t...   461   e-130

>AT5G13100.1 | Symbols:  | unknown protein; Has 1807 Blast hits to
           1807 proteins in 277 species: Archae - 0; Bacteria - 0;
           Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
           Other Eukaryotes - 339 (source: NCBI BLink). |
           chr5:4156789-4158235 FORWARD LENGTH=354
          Length = 354

 Score =  461 bits (1185), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/379 (65%), Positives = 288/379 (75%), Gaps = 38/379 (10%)

Query: 1   MGKIFCDSTTVAAEPFQGSPAATVSWMDPKSPPQVEPIGPVDLVVQANSISSGG------ 54
           MGK+ CDST      FQ SP+ TV W +P +      +  VDLV Q+ + ++        
Sbjct: 1   MGKLLCDSTAT----FQ-SPSPTVPWREPSTVAV--SLEDVDLVDQSAAAAAVDAVEKTM 53

Query: 55  -------WEDVVGLEEQQRRHLQRLYNKGVLWKPPPEKXXXXXXXXXXXXXXXADLRSVV 107
                  W++V GLEE QRRHL RL+ +GVLWK P +                    SVV
Sbjct: 54  AAATTTAWDEVFGLEEAQRRHLSRLHARGVLWKHPGKDESSA---------------SVV 98

Query: 108 FRLSHGGEVSSDGNCLFTASRKAMGGGEEDRVDPRELRRRTVARFLEDFGSAGFDERETV 167
           FRLSHGGEVSSDGNCLFTAS+KAM   E   +D R+LRRRTV RFLEDF SA  +E+E +
Sbjct: 99  FRLSHGGEVSSDGNCLFTASQKAM---EARGIDARDLRRRTVRRFLEDFRSASEEEKEVI 155

Query: 168 DDAIRHMYSPDLKNGWGIHVVQEVKLLAKKEDRFALDSAIEELVHLGMQREMAAESIYKE 227
            DAIRHMYSPDLK+GWGIH+VQE KLLAKK++R +LDSAIEEL+ +GM RE AAESIY+E
Sbjct: 156 TDAIRHMYSPDLKSGWGIHIVQEEKLLAKKDERESLDSAIEELLQIGMHRETAAESIYRE 215

Query: 228 RCIPVTDGPSWAKYMLISGSPEDEHDIITLQYTEEGLLSVDENREGRAAAFGDDIAIECL 287
           RC+PV DG SW+KYM ISGS EDE+DIITLQYTE+GLLSVDENREGRAAAFGDDIAIECL
Sbjct: 216 RCLPVNDGLSWSKYMSISGSTEDEYDIITLQYTEDGLLSVDENREGRAAAFGDDIAIECL 275

Query: 288 ATEFQREIYVVQAHGSDAMVDEENCVFFLPHRPRSQISEIPFFLFMKGTGWCGAGADHYE 347
           ATEF+REIYVVQAHGSD MV+EENCVFFLPH+PRS++ E+P FLFMKGTGWCG GADHYE
Sbjct: 276 ATEFKREIYVVQAHGSDGMVEEENCVFFLPHKPRSEVLEVPVFLFMKGTGWCGGGADHYE 335

Query: 348 PLIAHPSPLVSQEKVAVVL 366
           PLIA+PSPL+S EKVA+VL
Sbjct: 336 PLIANPSPLISHEKVALVL 354