Miyakogusa Predicted Gene

Lj1g3v3171170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3171170.1 Non Chatacterized Hit- tr|B4FG96|B4FG96_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,24.69,4e-16,seg,NULL,CUFF.30145.1
         (373 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14090.1 | Symbols:  | unknown protein; Has 56 Blast hits to ...   172   4e-43
AT3G27025.1 | Symbols:  | unknown protein; Has 25 Blast hits to ...    53   4e-07

>AT5G14090.1 | Symbols:  | unknown protein; Has 56 Blast hits to 56
           proteins in 18 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 2; Plants - 46; Viruses - 0; Other
           Eukaryotes - 8 (source: NCBI BLink). |
           chr5:4547230-4549214 FORWARD LENGTH=358
          Length = 358

 Score =  172 bits (436), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/392 (36%), Positives = 186/392 (47%), Gaps = 53/392 (13%)

Query: 1   MKLLGWMHRKFRQNSNEPFKDLVIGNACNCLSGQPSLDDEENYLKPSHGIKPFKQTQKSQ 60
           MK  GWMH KFR+NS EP KD   GN+ + LS  PSLD +E Y     G +     +K  
Sbjct: 1   MKFWGWMHHKFRENSKEPLKDASTGNSYSILSAHPSLDSQEVYPTACAGSRYNTGFRKQV 60

Query: 61  SLRK--SFSGVEATGVVDHEDYEGEEPSAAMSDLFPGFFSIGTLGSEQVVTSYPSTPTFA 118
           +L +  SF+G +       ED++ E      SD F GF +IGTLG E ++   P+TPTF 
Sbjct: 61  NLFQESSFAGPKQ---YTEEDFKDER----NSDFFDGFLAIGTLGGETLLDEQPATPTFG 113

Query: 119 ISVESITEKEDEVTENDLKLINDELEKVLGAETKXXXXXXXXXXXXXXXXTGRSSHVSII 178
           +S E     + +VTENDLKLI++EL+K L AE K                +GR+S  + I
Sbjct: 114 MSFEDPAIDDADVTENDLKLISNELDKFLEAEAK----------EGHHQPSGRNSDTNTI 163

Query: 179 TLSGKPIDGAAAESXXXXXXXTAICPLQEYLFGTAIELSETTTTVAKKEHRTSLGELFQ- 237
             + + I+G   E            PLQEY FG+ IEL E  + +A K+ R SLGELFQ 
Sbjct: 164 ASTIEAIEGVDDEEDNQPMK----FPLQEYFFGSLIELPE--SKIAGKKDRASLGELFQI 217

Query: 238 ---RSKLAEENYGXXXXXXXXXXXXXGDKSAMNLMKEKLKRRMLHACSRNSTSTSGGPFD 294
              + K +E  YG               KSA      K   + +H  SR   S SG P +
Sbjct: 218 TEVQDKQSENIYG-----KKKKQPNSAHKSAK--HLVKKVLKKIHPSSRG--SVSGKP-E 267

Query: 295 SASADTKLNKILHMFRKKVHPESSTAAHKSTKHRKNENKKKIINDGGHTKGDLGHPDEDS 354
             S   K  K++ +F +KVHPE S    K      N    K  N    T   + H  E S
Sbjct: 268 VDSTKKKFQKMVQVFHRKVHPEESIMETKIYSSVANPKSSK-ANSIDLTFEKVNHCHEAS 326

Query: 355 S-----AIR--------EHWIKTDADYLVLEL 373
                  +R        EHWIKTD DY VLEL
Sbjct: 327 KRCIQYELRSSRSAKNGEHWIKTDEDYFVLEL 358


>AT3G27025.1 | Symbols:  | unknown protein; Has 25 Blast hits to 25
           proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
           - 1; Fungi - 0; Plants - 24; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:9969735-9971084 FORWARD LENGTH=289
          Length = 289

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 121/289 (41%), Gaps = 72/289 (24%)

Query: 91  DLFPGFFSIGTLGSEQVVTSYPSTPTFAISV--ESITEKEDEVTENDLKLINDELEKVLG 148
           D F GF +IGTLG++      P TP F+  V  E  T +  E+     KLI  +L++ L 
Sbjct: 67  DEFCGFLAIGTLGTD------PETPKFSAMVAEEDATGEIKEMA----KLIAKKLDQFLK 116

Query: 149 AETKXXXXXXXXXXXXXXXXTGRSSHVSIITLSGKPIDGAAAESXXXXXXXTAICPLQEY 208
              +                  RS  V I                      +  CPLQ+Y
Sbjct: 117 EYPEDT----------------RSKRVKI----------------------SNECPLQDY 138

Query: 209 -LFGTAIELSETTTTVAKKEHRTSLGELFQRSKLAE-ENYGXXXXXXXXXXXXXGDKSAM 266
            LF ++IEL++ +    KK+ ++ L  LF+R +  + E Y                 S  
Sbjct: 139 DLFRSSIELTKGSNGRVKKK-KSLLTSLFKRRQTVQGEPYIEKH-------------STR 184

Query: 267 NLMKEKLKRRMLHACSRNSTSTSGGPFDSASADTKLNKI-LHMFRKKVHPESSTAAHKST 325
           + +K   K+  LH  S  S + +    DS S   K  K  +   R+KVHP   T A    
Sbjct: 185 DAIKRVFKK--LHGAS--SKTRNDDEDDSMSKKKKDLKKNVQTCRRKVHPVLCTTAIPQD 240

Query: 326 KHRKNENKKKIINDGGHTKGDLGHPD-EDSSAIREHWIKTDADYLVLEL 373
            +  ++ +K  +     T G LG     +++  RE+WIKTD +YLVLEL
Sbjct: 241 DNEIDDRRKVDLKVPSLTGGFLGASSISEANRKRENWIKTDTEYLVLEL 289