Miyakogusa Predicted Gene
- Lj1g3v3139990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3139990.1 Non Chatacterized Hit- tr|I1N4Y9|I1N4Y9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12421 PE,77.44,0,domain
with conserved PWWP motif,PWWP; "FY-rich" domain, N-terminal
region,FY-rich, N-terminal; "FY-,CUFF.30130.1
(766 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 | chr1:17... 644 0.0
AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 | ... 644 0.0
AT2G31650.1 | Symbols: ATX1, SDG27 | homologue of trithorax | ch... 611 e-175
AT5G53430.1 | Symbols: SDG29, SET29, ATX5 | SET domain group 29 ... 91 4e-18
AT3G61740.1 | Symbols: SDG14, ATX3 | SET domain protein 14 | chr... 90 5e-18
AT3G61740.2 | Symbols: SDG14, ATX3 | SET domain protein 14 | chr... 90 6e-18
AT4G27910.1 | Symbols: ATX4, SDG16 | SET domain protein 16 | chr... 87 4e-17
AT3G14740.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 83 8e-16
AT3G14740.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 83 9e-16
AT1G77800.1 | Symbols: | PHD finger family protein | chr1:29253... 83 9e-16
AT1G77800.2 | Symbols: | PHD finger family protein | chr1:29253... 83 9e-16
AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100975... 59 1e-08
AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 | chr4:1100900... 59 1e-08
AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcriptio... 57 6e-08
AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcriptio... 57 6e-08
AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24 ... 56 8e-08
AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast; EXPR... 56 8e-08
AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) fam... 52 2e-06
AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) fam... 52 2e-06
AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jm... 52 2e-06
AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jm... 52 2e-06
AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | c... 50 5e-06
AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-91293... 50 5e-06
>AT1G05830.2 | Symbols: ATX2 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/624 (53%), Positives = 407/624 (65%), Gaps = 12/624 (1%)
Query: 139 RKIGTAELEKLGVDLNGVRNHLDGPRLRECRTQIXXXXXXXXXXXXXXXXXXASLENFPK 198
R+IG EL KLGVD + P LR CR + +++N K
Sbjct: 141 RRIGNGELMKLGVDSTTLSVSATPP-LRGCRIKAVCSGNKQDGSSRSKRN---TVKNQEK 196
Query: 199 LIPESRTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDD 258
++ S TAKKWV LS+D DP+ F+GL+CKV WP+D Y G + GY++E K H +KY D
Sbjct: 197 VVTASATAKKWVRLSYDGVDPKHFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGD 256
Query: 259 GEEENLILSNENVKFHVSRDEMKHLKLSYAKVRDSNVSDYDVEEMLALAASLDDCQDFEP 318
G+ E L L E +KF +SRD+M+ L + + D V D +E++ LAAS ++CQDFEP
Sbjct: 257 GDGEELALRREKIKFLISRDDMELLNMKFG-TNDVVVDGQDYDELVILAASFEECQDFEP 315
Query: 319 GDIIWAKLTGHAMWPAVVLDESLASNCRGLRMFI-GGRSVPVQFFGTHDFARVRLQQVKS 377
DIIWAKLTGHAMWPA+++DES+ +GL I GGRSV VQFFGTHDFAR++++Q S
Sbjct: 316 RDIIWAKLTGHAMWPAIIVDESVIVKRKGLNNKISGGRSVLVQFFGTHDFARIQVKQAVS 375
Query: 378 FLSGLLTDLHSKCKKLSFIEGLEEAKRYLSQQKLPLEMLELQKRCTADEYNNVSGEDGGC 437
FL GLL+ KCK+ F E +EEAK YL + KLP M +LQK D ++ +
Sbjct: 376 FLKGLLSRSPLKCKQPRFEEAMEEAKMYLKEYKLPGRMDQLQKVADTDCSERINSGEEDS 435
Query: 438 TDSGEDCLNDKGTCASLQNIETFPYEVGADLQILRLGKIVEGSASFGDGRSIWPEGYTAV 497
++SG+D D + + +G DLQI+ LG+IV S F D + WPEGYTA
Sbjct: 436 SNSGDDYTKDGEVWLRPTELGDCLHRIG-DLQIINLGRIVTDSEFFKDSKHTWPEGYTAT 494
Query: 498 RKFMSLTDPKVSVPYKMEVLRDPESKFRPLFRVTVDGGEQFNDYTPSACWNQVYKRIKKM 557
RKF+SL DP S YKMEVLRD ESK RP+FRVT + GEQF TPSACWN++Y RIKK+
Sbjct: 495 RKFISLKDPNASAMYKMEVLRDAESKTRPVFRVTTNSGEQFKGDTPSACWNKIYNRIKKI 554
Query: 558 EKDICNGSVAEGGIERGYESGSDMFGFSNPRVAKLIQGLXXXXXXXXXXXXXLGSRSYNG 617
+ N V G+ +ESG+DMFGFSNP V KLIQGL S Y
Sbjct: 555 QIASDNPDVLGEGL---HESGTDMFGFSNPEVDKLIQGLLQSRPPSKVSQRKYSSGKYQD 611
Query: 618 LPVGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLC 677
P GYR V + W DLDKCNVCHMDEEYENNLFLQCDKCRMMVH RCYG LEP NG+LWLC
Sbjct: 612 HPTGYRPVRVEWKDLDKCNVCHMDEEYENNLFLQCDKCRMMVHTRCYGQLEPHNGILWLC 671
Query: 678 NLCRSGAXXXXXX--XXXXIGGAMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSR 735
NLCR A +GGAMKPTTDGRWAHLACA+WIPETCL D+K+MEPIDG+ +
Sbjct: 672 NLCRPVALDIPPRCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLLDVKKMEPIDGVKK 731
Query: 736 ISKDRWKLLCSICGVSYGACIQVS 759
+SKDRWKLLCSICGVSYGACIQ S
Sbjct: 732 VSKDRWKLLCSICGVSYGACIQCS 755
>AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 |
chr1:1754452-1761225 FORWARD LENGTH=1083
Length = 1083
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/624 (53%), Positives = 407/624 (65%), Gaps = 12/624 (1%)
Query: 139 RKIGTAELEKLGVDLNGVRNHLDGPRLRECRTQIXXXXXXXXXXXXXXXXXXASLENFPK 198
R+IG EL KLGVD + P LR CR + +++N K
Sbjct: 141 RRIGNGELMKLGVDSTTLSVSATPP-LRGCRIKAVCSGNKQDGSSRSKRN---TVKNQEK 196
Query: 199 LIPESRTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDD 258
++ S TAKKWV LS+D DP+ F+GL+CKV WP+D Y G + GY++E K H +KY D
Sbjct: 197 VVTASATAKKWVRLSYDGVDPKHFIGLQCKVFWPLDAVWYPGSIVGYNVETKHHIVKYGD 256
Query: 259 GEEENLILSNENVKFHVSRDEMKHLKLSYAKVRDSNVSDYDVEEMLALAASLDDCQDFEP 318
G+ E L L E +KF +SRD+M+ L + + D V D +E++ LAAS ++CQDFEP
Sbjct: 257 GDGEELALRREKIKFLISRDDMELLNMKFG-TNDVVVDGQDYDELVILAASFEECQDFEP 315
Query: 319 GDIIWAKLTGHAMWPAVVLDESLASNCRGLRMFI-GGRSVPVQFFGTHDFARVRLQQVKS 377
DIIWAKLTGHAMWPA+++DES+ +GL I GGRSV VQFFGTHDFAR++++Q S
Sbjct: 316 RDIIWAKLTGHAMWPAIIVDESVIVKRKGLNNKISGGRSVLVQFFGTHDFARIQVKQAVS 375
Query: 378 FLSGLLTDLHSKCKKLSFIEGLEEAKRYLSQQKLPLEMLELQKRCTADEYNNVSGEDGGC 437
FL GLL+ KCK+ F E +EEAK YL + KLP M +LQK D ++ +
Sbjct: 376 FLKGLLSRSPLKCKQPRFEEAMEEAKMYLKEYKLPGRMDQLQKVADTDCSERINSGEEDS 435
Query: 438 TDSGEDCLNDKGTCASLQNIETFPYEVGADLQILRLGKIVEGSASFGDGRSIWPEGYTAV 497
++SG+D D + + +G DLQI+ LG+IV S F D + WPEGYTA
Sbjct: 436 SNSGDDYTKDGEVWLRPTELGDCLHRIG-DLQIINLGRIVTDSEFFKDSKHTWPEGYTAT 494
Query: 498 RKFMSLTDPKVSVPYKMEVLRDPESKFRPLFRVTVDGGEQFNDYTPSACWNQVYKRIKKM 557
RKF+SL DP S YKMEVLRD ESK RP+FRVT + GEQF TPSACWN++Y RIKK+
Sbjct: 495 RKFISLKDPNASAMYKMEVLRDAESKTRPVFRVTTNSGEQFKGDTPSACWNKIYNRIKKI 554
Query: 558 EKDICNGSVAEGGIERGYESGSDMFGFSNPRVAKLIQGLXXXXXXXXXXXXXLGSRSYNG 617
+ N V G+ +ESG+DMFGFSNP V KLIQGL S Y
Sbjct: 555 QIASDNPDVLGEGL---HESGTDMFGFSNPEVDKLIQGLLQSRPPSKVSQRKYSSGKYQD 611
Query: 618 LPVGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLC 677
P GYR V + W DLDKCNVCHMDEEYENNLFLQCDKCRMMVH RCYG LEP NG+LWLC
Sbjct: 612 HPTGYRPVRVEWKDLDKCNVCHMDEEYENNLFLQCDKCRMMVHTRCYGQLEPHNGILWLC 671
Query: 678 NLCRSGAXXXXXX--XXXXIGGAMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSR 735
NLCR A +GGAMKPTTDGRWAHLACA+WIPETCL D+K+MEPIDG+ +
Sbjct: 672 NLCRPVALDIPPRCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLLDVKKMEPIDGVKK 731
Query: 736 ISKDRWKLLCSICGVSYGACIQVS 759
+SKDRWKLLCSICGVSYGACIQ S
Sbjct: 732 VSKDRWKLLCSICGVSYGACIQCS 755
>AT2G31650.1 | Symbols: ATX1, SDG27 | homologue of trithorax |
chr2:13455448-13462181 REVERSE LENGTH=1062
Length = 1062
Score = 611 bits (1575), Expect = e-175, Method: Compositional matrix adjust.
Identities = 322/626 (51%), Positives = 401/626 (64%), Gaps = 23/626 (3%)
Query: 137 KRRKIGTAELEKLGVDLNGVRNHLDGPRLRECRTQIXXXXXXXXXXXXXXXXXXASLENF 196
KRRKIG EL K G++ G LR C+ +S +N
Sbjct: 133 KRRKIGNCELVKSGMESIG---------LRRCKEN---NAFSGNKQNGSSRRKGSSSKNQ 180
Query: 197 PKLIPESRTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKY 256
K SR+AKKWV LS+D DP +F+GL+CKV WP+D Y G + GY E K + +KY
Sbjct: 181 DKATLASRSAKKWVRLSYDGVDPTSFIGLQCKVFWPLDALWYEGSIVGYSAERKRYTVKY 240
Query: 257 DDGEEENLILSNENVKFHVSRDEMKHLKLSYAKVRDSNVSDYDVEEMLALAASLDDCQDF 316
DG +E+++ E +KF VSR+EM+ L L + + V D +EM+ LAA+LD+CQDF
Sbjct: 241 RDGCDEDIVFDREMIKFLVSREEMELLHLKFC-TSNVTVDGRDYDEMVVLAATLDECQDF 299
Query: 317 EPGDIIWAKLTGHAMWPAVVLDESLASNCRGLRMFI-GGRSVPVQFFGTHDFARVRLQQV 375
EPGDI+WAKL GHAMWPAV++DES+ +GL + GG S+ VQFFGTHDFAR++++Q
Sbjct: 300 EPGDIVWAKLAGHAMWPAVIVDESIIGERKGLNNKVSGGGSLLVQFFGTHDFARIKVKQA 359
Query: 376 KSFLSGLLTDLHSKCKKLSFIEGLEEAKRYLSQQKLPLEMLELQKRCTADEYNNVSGEDG 435
SF+ GLL+ H KCK+ F EG++EAK YL +LP M +LQK + + + + +
Sbjct: 360 ISFIKGLLSPSHLKCKQPRFEEGMQEAKMYLKAHRLPERMSQLQKGADSVDSDMANSTEE 419
Query: 436 GCTDSGEDCLNDKGTCASLQNIETFPYEVGADLQILRLGKIVEGSASFGDGRSIWPEGYT 495
G +SG D LND F + +G DL I+ LGK+V S F D IWPEGYT
Sbjct: 420 G--NSGGDLLNDGEVWLRPTEHVDFRHIIG-DLLIINLGKVVTDSQFFKDENHIWPEGYT 476
Query: 496 AVRKFMSLTDPKVSVPYKMEVLRDPESKFRPLFRVTVDGGEQFNDYTPSACWNQVYKRIK 555
A+RKF SLTD S YKMEVLRD E+K PLF VT D GEQF TPSACWN++Y RIK
Sbjct: 477 AMRKFTSLTDHSASALYKMEVLRDAETKTHPLFIVTADSGEQFKGPTPSACWNKIYNRIK 536
Query: 556 KMEKDICNGSVAEGGIERGYESGSDMFGFSNPRVAKLIQGLXXXXXXXXXXXXXLGSRSY 615
K++ N E SG+DMFG SNP V KL+Q L +
Sbjct: 537 KVQ----NSDSPNILGEELNGSGTDMFGLSNPEVIKLVQDLSKSRPSSHVSMCKNSLGRH 592
Query: 616 NGLPVGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLW 675
P GYR V ++W DLDKCNVCHMDEEYENNLFLQCDKCRMMVHA+CYG LEP +G LW
Sbjct: 593 QNQPTGYRPVRVDWKDLDKCNVCHMDEEYENNLFLQCDKCRMMVHAKCYGELEPCDGALW 652
Query: 676 LCNLCRSGAXXXXXX--XXXXIGGAMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGL 733
LCNLCR GA +GGAMKPTTDGRWAHLACA+WIPETCL+D+K+MEPIDG+
Sbjct: 653 LCNLCRPGAPDMPPRCCLCPVVGGAMKPTTDGRWAHLACAIWIPETCLSDVKKMEPIDGV 712
Query: 734 SRISKDRWKLLCSICGVSYGACIQVS 759
+++SKDRWKL+C+ICGVSYGACIQ S
Sbjct: 713 NKVSKDRWKLMCTICGVSYGACIQCS 738
>AT5G53430.1 | Symbols: SDG29, SET29, ATX5 | SET domain group 29 |
chr5:21677623-21683166 FORWARD LENGTH=1043
Length = 1043
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 622 YRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCR 681
Y V++ W ++C VC E+++ N + C++C++ VH CYG + W+C C
Sbjct: 598 YEPVNVKW-TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGTRNVRDFTSWVCKACE 656
Query: 682 SGAXXXXXXXXXXIGGAMKPT-TDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDR 740
+ GGA+KPT + W H+ CA + PE C A ++MEP G+ I
Sbjct: 657 TPEIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPALGILSIPSSN 716
Query: 741 WKLLCSICGVSYGACIQ 757
+ +C IC +G+C Q
Sbjct: 717 FVKICVICKQIHGSCTQ 733
>AT3G61740.1 | Symbols: SDG14, ATX3 | SET domain protein 14 |
chr3:22851133-22856548 REVERSE LENGTH=1018
Length = 1018
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 622 YRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCR 681
Y V W ++C VC E++E N + C++C++ VH CYGV + + W+C C
Sbjct: 537 YEPVRAKW-TTERCAVCRWVEDWEENKMIICNRCQVAVHQECYGVSKSQDLTSWVCRACE 595
Query: 682 SGAXXXXXXXXXXIGGAMKPT-TDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDR 740
+ GGA+KP+ +G W H+ CA + PE + + MEP GL +I +
Sbjct: 596 TPDIERDCCLCPVKGGALKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAVGLFKIPANS 655
Query: 741 WKLLCSICGVSYGACIQ 757
+ +C+IC ++G+C+
Sbjct: 656 FLKVCTICKQTHGSCVH 672
>AT3G61740.2 | Symbols: SDG14, ATX3 | SET domain protein 14 |
chr3:22851133-22856548 REVERSE LENGTH=982
Length = 982
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 622 YRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCR 681
Y V W ++C VC E++E N + C++C++ VH CYGV + + W+C C
Sbjct: 537 YEPVRAKW-TTERCAVCRWVEDWEENKMIICNRCQVAVHQECYGVSKSQDLTSWVCRACE 595
Query: 682 SGAXXXXXXXXXXIGGAMKPT-TDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDR 740
+ GGA+KP+ +G W H+ CA + PE + + MEP GL +I +
Sbjct: 596 TPDIERDCCLCPVKGGALKPSDVEGLWVHVTCAWFRPEVGFLNHENMEPAVGLFKIPANS 655
Query: 741 WKLLCSICGVSYGACIQ 757
+ +C+IC ++G+C+
Sbjct: 656 FLKVCTICKQTHGSCVH 672
>AT4G27910.1 | Symbols: ATX4, SDG16 | SET domain protein 16 |
chr4:13894694-13900256 FORWARD LENGTH=1027
Length = 1027
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 622 YRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCR 681
Y V+ W ++C VC E+++ N + C++C++ VH CYG + W+C C
Sbjct: 583 YEPVNAKW-TTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSWVCKACE 641
Query: 682 SGAXXXXXXXXXXIGGAMKPT-TDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDR 740
GGA+KPT + W H+ CA + PE C A ++MEP G+ I
Sbjct: 642 RPDIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSTN 701
Query: 741 WKLLCSICGVSYGACIQ 757
+ +C IC +G+C Q
Sbjct: 702 FVKICVICKQIHGSCTQ 718
>AT3G14740.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:4952185-4953306 REVERSE LENGTH=343
Length = 343
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 635 CNVCHMDEEYENNLFLQCDKCRMMVHARCYG--VLEPVNGVLWLCNLCRSGAXXXXXXXX 692
C VC + N + CD C +MVHA CYG +++ + W C C S
Sbjct: 153 CAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSSKNREKIFSC 212
Query: 693 XXI---GGAMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWKLLCSICG 749
GGAMKPT DGRWAH+ CA+++PE D + E I S + RWK C +C
Sbjct: 213 CLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREGI-CCSEVLSKRWKDRCYLCK 271
Query: 750 VSYGACIQVS 759
V G I+ S
Sbjct: 272 VRRGCVIECS 281
>AT3G14740.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:4952185-4953306 REVERSE LENGTH=341
Length = 341
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 635 CNVCHMDEEYENNLFLQCDKCRMMVHARCYG--VLEPVNGVLWLCNLCRSGAXXXXXXXX 692
C VC + N + CD C +MVHA CYG +++ + W C C S
Sbjct: 153 CAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQCLSSKNREKIFSC 212
Query: 693 XXI---GGAMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWKLLCSICG 749
GGAMKPT DGRWAH+ CA+++PE D + E I S + RWK C +C
Sbjct: 213 CLCTTKGGAMKPTNDGRWAHITCALFVPEVYFEDPEGREGI-CCSEVLSKRWKDRCYLCK 271
Query: 750 VSYGACIQVS 759
V G I+ S
Sbjct: 272 VRRGCVIECS 281
>AT1G77800.1 | Symbols: | PHD finger family protein |
chr1:29253800-29260190 FORWARD LENGTH=1375
Length = 1375
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 649 FLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCRSGAXXXXXXXXXXI----GGAMKP--- 701
+ C C+ VH +CYG+LE +G WLC+ C + GG +KP
Sbjct: 295 LIVCTSCKATVHKKCYGLLED-SGKPWLCSWCELENGRADSERPCLLCPKKGGILKPVLS 353
Query: 702 -TTDG---RWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQ 757
T +G +AHL C++W+PE + D+K+MEPI I + R KLLC++C V GACI+
Sbjct: 354 KTENGGPAEFAHLFCSLWMPEVYIEDLKKMEPILNFPGIKETRRKLLCNLCKVKSGACIR 413
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 17/137 (12%)
Query: 635 CNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCRS---------GAX 685
C++C E N L + C C++ VH CY + G W C LC G
Sbjct: 962 CDICRRSETIWN-LIVVCSSCKVAVHIDCYKCAKESTGP-WYCELCAESSSEPSFNFGEK 1019
Query: 686 XXXXXXXXXIGG---AMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWK 742
GG A + TT+G+W H CA W E+ ++ P+ G+ ++K
Sbjct: 1020 PNSSTECTLCGGTTGAFRKTTNGQWVHAFCAEWSLESTFRR-GQINPVQGMESLAKKTDN 1078
Query: 743 LLCSICGVSYGACIQVS 759
C +C YGAC + S
Sbjct: 1079 --CCVCQRIYGACTKCS 1093
>AT1G77800.2 | Symbols: | PHD finger family protein |
chr1:29253800-29260190 FORWARD LENGTH=1374
Length = 1374
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 649 FLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCRSGAXXXXXXXXXXI----GGAMKP--- 701
+ C C+ VH +CYG+LE +G WLC+ C + GG +KP
Sbjct: 295 LIVCTSCKATVHKKCYGLLED-SGKPWLCSWCELENGRADSERPCLLCPKKGGILKPVLS 353
Query: 702 -TTDG---RWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQ 757
T +G +AHL C++W+PE + D+K+MEPI I + R KLLC++C V GACI+
Sbjct: 354 KTENGGPAEFAHLFCSLWMPEVYIEDLKKMEPILNFPGIKETRRKLLCNLCKVKSGACIR 413
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 17/137 (12%)
Query: 635 CNVCHMDEEYENNLFLQCDKCRMMVHARCYGVLEPVNGVLWLCNLCRS---------GAX 685
C++C E N L + C C++ VH CY + G W C LC G
Sbjct: 962 CDICRRSETIWN-LIVVCSSCKVAVHIDCYKCAKESTGP-WYCELCAESSSEPSFNFGEK 1019
Query: 686 XXXXXXXXXIGG---AMKPTTDGRWAHLACAMWIPETCLADIKRMEPIDGLSRISKDRWK 742
GG A + TT+G+W H CA W E+ ++ P+ G+ ++K
Sbjct: 1020 PNSSTECTLCGGTTGAFRKTTNGQWVHAFCAEWSLESTFRR-GQINPVQGMESLAKKTDN 1078
Query: 743 LLCSICGVSYGACIQVS 759
C +C YGAC + S
Sbjct: 1079 --CCVCQRIYGACTKCS 1093
>AT4G20400.2 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009753-11013588 FORWARD LENGTH=897
Length = 897
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 487 RSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESKFRPLFRVTVDG--GEQFNDYTPS 544
++I+P+G+ + KF+S+ DP Y EVL PLFRV+V+ E F++ +
Sbjct: 695 QAIYPKGFKSRVKFLSVLDPTNLTNYISEVL--DAGLLGPLFRVSVEDYPTENFSNVSAE 752
Query: 545 ACWNQVYKRIKKMEKDICNGSVAEGGIERGYES--GSDMFGFSNPRVAKLIQGL 596
CW V +R+K C+ V+ + ES G +MFGF +P V K+++ L
Sbjct: 753 KCWQMVTQRLKLEIIKKCDQPVSSLTSLQPLESINGLEMFGFLSPHVIKVVEAL 806
>AT4G20400.1 | Symbols: JMJ14, PKDM7B | JUMONJI 14 |
chr4:11009004-11013588 FORWARD LENGTH=954
Length = 954
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 487 RSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESKFRPLFRVTVDG--GEQFNDYTPS 544
++I+P+G+ + KF+S+ DP Y EVL PLFRV+V+ E F++ +
Sbjct: 752 QAIYPKGFKSRVKFLSVLDPTNLTNYISEVLD--AGLLGPLFRVSVEDYPTENFSNVSAE 809
Query: 545 ACWNQVYKRIKKMEKDICNGSVAEGGIERGYES--GSDMFGFSNPRVAKLIQGL 596
CW V +R+K C+ V+ + ES G +MFGF +P V K+++ L
Sbjct: 810 KCWQMVTQRLKLEIIKKCDQPVSSLTSLQPLESINGLEMFGFLSPHVIKVVEAL 863
>AT4G32620.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1539
Length = 1539
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 204 RTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGEEEN 263
R + + + F + D + + KV WP+D + Y G+V G+D + +HH+KYDD +EE
Sbjct: 337 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEW 396
Query: 264 LILSNENVKFHV---------SRDEMKHLKLSYAKVRDSNVSDYDVEEMLALAASLDDCQ 314
+ L E K + R S KV+ ++ S D EE D C
Sbjct: 397 INLQGERFKILLFPSEVPGKNQRKRRCSESKSTQKVKGNDTSSKD-EEKQKEKLEDDSCM 455
Query: 315 DFEPGDIIWAKLTGH 329
+ EP I W + H
Sbjct: 456 ESEP-IITWLARSRH 469
>AT4G32620.2 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr4:15731968-15737222 FORWARD
LENGTH=1540
Length = 1540
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 204 RTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGEEEN 263
R + + + F + D + + KV WP+D + Y G+V G+D + +HH+KYDD +EE
Sbjct: 337 RKRRHFYEILFSDVDSHWLLNKKIKVFWPLDERWYHGFVDGFDGDKNLHHVKYDDRDEEW 396
Query: 264 LILSNENVKFHV---------SRDEMKHLKLSYAKVRDSNVSDYDVEEMLALAASLDDCQ 314
+ L E K + R S KV+ ++ S D EE D C
Sbjct: 397 INLQGERFKILLFPSEVPGKNQRKRRCSESKSTQKVKGNDTSSKD-EEKQKEKLEDDSCM 455
Query: 315 DFEPGDIIWAKLTGH 329
+ EP I W + H
Sbjct: 456 ESEP-IITWLARSRH 469
>AT4G31880.2 | Symbols: | LOCATED IN: cytosol; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages;
BEST Arabidopsis thaliana protein match is:
Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1). |
chr4:15419435-15423939 REVERSE LENGTH=872
Length = 872
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 201 PESRTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGE 260
P S T +K +L A E+ VG R KV WPMD Y G V+ YD K H + YDDG+
Sbjct: 587 PNSNTKRKR-SLGQGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGD 645
Query: 261 EENLILSNE 269
+E L L N+
Sbjct: 646 QEILYLKNQ 654
>AT4G31880.1 | Symbols: | LOCATED IN: cytosol, chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match
is: Tudor/PWWP/MBT superfamily protein
(TAIR:AT1G15940.1); Has 137162 Blast hits to 70781
proteins in 2973 species: Archae - 289; Bacteria -
24182; Metazoa - 56725; Fungi - 20130; Plants - 6559;
Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink). | chr4:15419435-15423939 REVERSE LENGTH=873
Length = 873
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 201 PESRTAKKWVTLSFDNADPEAFVGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGE 260
P S T +K +L A E+ VG R KV WPMD Y G V+ YD K H + YDDG+
Sbjct: 588 PNSNTKRKR-SLGQGKASGESLVGSRIKVWWPMDQAYYKGVVESYDAAKKKHLVIYDDGD 646
Query: 261 EENLILSNE 269
+E L L N+
Sbjct: 647 QEILYLKNQ 655
>AT1G30810.2 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 464 VGADLQILRLGKIVEGSASFGDGRSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESK 523
+G ++ + LG ++ G + + +I+P+G+ + KF ++ DP Y EVL
Sbjct: 648 LGVSVEPINLGFLIFGKL-WCNKYAIFPKGFRSRVKFYNVLDPTRMSNYISEVLD--AGL 704
Query: 524 FRPLFRVTVDGG--EQFNDYTPSACWNQVYKRIKKMEKDICNGSVAEG-GIERGYES--G 578
PLFRVT++ E F + + CW V +R+K + S + G I +ES G
Sbjct: 705 MGPLFRVTLEESPDESFFNVSAQQCWEMVMRRVK-------DTSTSLGLPILPQFESING 757
Query: 579 SDMFGFSNPRVAKLIQGL 596
MFGF +P + + I+ L
Sbjct: 758 LQMFGFLSPSIVQAIEAL 775
>AT1G30810.1 | Symbols: | Transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein |
chr1:10938139-10941505 REVERSE LENGTH=819
Length = 819
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 464 VGADLQILRLGKIVEGSASFGDGRSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESK 523
+G ++ + LG ++ G + + +I+P+G+ + KF ++ DP Y EVL
Sbjct: 648 LGVSVEPINLGFLIFGKL-WCNKYAIFPKGFRSRVKFYNVLDPTRMSNYISEVLD--AGL 704
Query: 524 FRPLFRVTVDGG--EQFNDYTPSACWNQVYKRIKKMEKDICNGSVAEG-GIERGYES--G 578
PLFRVT++ E F + + CW V +R+K + S + G I +ES G
Sbjct: 705 MGPLFRVTLEESPDESFFNVSAQQCWEMVMRRVK-------DTSTSLGLPILPQFESING 757
Query: 579 SDMFGFSNPRVAKLIQGL 596
MFGF +P + + I+ L
Sbjct: 758 LQMFGFLSPSIVQAIEAL 775
>AT1G08620.2 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 464 VGADLQILRLGKIVEGSASFGDGRSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESK 523
+ +++ L G ++ G S+ R+I+P+G+ + K++++ DP Y E+L +
Sbjct: 978 INCNVEPLSYGCVLSGK-SWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILD--AGR 1034
Query: 524 FRPLFRVTVDG--GEQFNDYTPSACWNQVYKRI-KKMEKDICNGSVAEGGIE-RGYESGS 579
PLF V ++ E F +P+ CW V +R+ +++ K G ++ G G
Sbjct: 1035 NSPLFMVYLESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPDGF 1094
Query: 580 DMFGFSNPRVAKLIQGL 596
+MFG+S+P + + I+ L
Sbjct: 1095 EMFGYSSPAIVQAIEAL 1111
>AT1G08620.1 | Symbols: PKDM7D | Transcription factor jumonji (jmj)
family protein / zinc finger (C5HC2 type) family protein
| chr1:2737554-2743370 FORWARD LENGTH=1209
Length = 1209
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 464 VGADLQILRLGKIVEGSASFGDGRSIWPEGYTAVRKFMSLTDPKVSVPYKMEVLRDPESK 523
+ +++ L G ++ G S+ R+I+P+G+ + K++++ DP Y E+L +
Sbjct: 978 INCNVEPLSYGCVLSGK-SWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILD--AGR 1034
Query: 524 FRPLFRVTVDG--GEQFNDYTPSACWNQVYKRI-KKMEKDICNGSVAEGGIE-RGYESGS 579
PLF V ++ E F +P+ CW V +R+ +++ K G ++ G G
Sbjct: 1035 NSPLFMVYLESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPDGF 1094
Query: 580 DMFGFSNPRVAKLIQGL 596
+MFG+S+P + + I+ L
Sbjct: 1095 EMFGYSSPAIVQAIEAL 1111
>AT4G02070.1 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 |
chr4:906079-912930 FORWARD LENGTH=1324
Length = 1324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 223 VGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGEEENLILSNENVKFHV---SRDE 279
VG + +V+WP+D K Y G V YD H ++Y+DGEEE+L L E ++ V S D
Sbjct: 125 VGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEKSGDR 184
Query: 280 MKHLKLSYAKVRDSNV-SDYDVE 301
LK + +R SD DVE
Sbjct: 185 FNRLKRGASALRKVVTDSDDDVE 207
>AT4G02070.2 | Symbols: MSH6 | MUTS homolog 6 | chr4:906079-912930
FORWARD LENGTH=1321
Length = 1321
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 223 VGLRCKVHWPMDLKSYAGYVKGYDIEAKIHHIKYDDGEEENLILSNENVKFHV---SRDE 279
VG + +V+WP+D K Y G V YD H ++Y+DGEEE+L L E ++ V S D
Sbjct: 125 VGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEKSGDR 184
Query: 280 MKHLKLSYAKVRDSNV-SDYDVE 301
LK + +R SD DVE
Sbjct: 185 FNRLKRGASALRKVVTDSDDDVE 207