Miyakogusa Predicted Gene

Lj1g3v3137960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137960.1 Non Chatacterized Hit- tr|B9F7L8|B9F7L8_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,80.36,3e-18,no
description,Sterile alpha motif/pointed domain; STERILE ALPHA MOTIF
(SAM) DOMAIN-CONTAINING PROTE,CUFF.30125.1
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G48800.1 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   120   1e-27
AT5G23680.1 | Symbols:  | Sterile alpha motif (SAM) domain-conta...   114   8e-26

>AT3G48800.1 | Symbols:  | Sterile alpha motif (SAM)
           domain-containing protein | chr3:18095825-18096661
           REVERSE LENGTH=278
          Length = 278

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/243 (38%), Positives = 126/243 (51%), Gaps = 41/243 (16%)

Query: 46  KRQRRPSVRLGEIGDQRATGHGNDS-------HHTRRPTIPPWSWRIPREPSRAASKARS 98
           KR RRPSVRLGEIG  +     +            R+    P +    R+ +  +S+ R+
Sbjct: 36  KRLRRPSVRLGEIGGDQYQQQHHHHAAAAAYDSQGRKSKWTPTTTSGNRKDTSKSSRTRT 95

Query: 99  ATNPVNGGEEFGNSN-------------SRRGKAKRGSTT--KRLRSEFASRTIDEN--- 140
            TN  +G E  G  +             S R K + GS+   KR+RS + S+  D +   
Sbjct: 96  LTNLSSGYENIGTLDDEREGNVDSFGVGSWRVKKRVGSSAAAKRVRSNWVSKVGDGDEKI 155

Query: 141 ---------FDD----DHASPV--HSVEENGLDCWNVDRSEDHRVRVSDGVESESRERRK 185
                    F D    D  SP+   S++ +G   +   R E +    +   ES + +   
Sbjct: 156 SGGEELEGGFRDFSREDSESPIKEESLDRDGGGFYGRRRYESNNSSGNREFES-NMDGGG 214

Query: 186 NEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSRRKMYTAIQKLQ 245
            EGV+ WL ELGL RY PMFEIHEVD+E+LP+LTLEDLKDMGINAVGSRRKM+ AIQKL 
Sbjct: 215 KEGVKIWLQELGLGRYWPMFEIHEVDEEVLPLLTLEDLKDMGINAVGSRRKMFCAIQKLG 274

Query: 246 KGF 248
           + F
Sbjct: 275 REF 277


>AT5G23680.1 | Symbols:  | Sterile alpha motif (SAM)
           domain-containing protein | chr5:7985573-7986460 REVERSE
           LENGTH=295
          Length = 295

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 124/254 (48%), Gaps = 51/254 (20%)

Query: 46  KRQRRPSVRLGEIGDQRATGH---GNDSHHTRRPTIPPWSWRIP-----REP------SR 91
           KR RRPSVRLG+IG  +   H     DS   RRP   P           +EP      + 
Sbjct: 41  KRLRRPSVRLGDIGGDQYHQHVVAAYDSPQVRRPKWRPSGGGGGGGGNRKEPNNQSGKTT 100

Query: 92  AASKARSATNPVNGGEE-----------FGNSNSRRGKAKRGS-----------TTKRLR 129
           ++S+ R+ TN  +GG E            G+   ++     G            + KR+R
Sbjct: 101 SSSRTRTMTNLSSGGYENTGTLDEDPVSIGSWRVKKWVKSSGGETAATTTTNTASAKRVR 160

Query: 130 SEFASRTI-----DENFDDDHASPVHSVEENGLDCWNVDRSEDHRVRVSDGVESESRER- 183
           S +A+R       DE F  +        E  G + +     ED    + +    E+RE  
Sbjct: 161 SNWATRNDGVEQGDEKFSGEEEEEEEDEELGGEEGFRDFSREDSESPMKERRRYENREVE 220

Query: 184 ---------RKNEGVRSWLFELGLSRYAPMFEIHEVDDELLPMLTLEDLKDMGINAVGSR 234
                    R  EGV+ WL ELGL RY PMFE+HEVD+++LP+LTLEDLKDMGINAVGSR
Sbjct: 221 LLGDWQSGGRGKEGVKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDLKDMGINAVGSR 280

Query: 235 RKMYTAIQKLQKGF 248
           RKMY AIQKL + F
Sbjct: 281 RKMYCAIQKLGREF 294