Miyakogusa Predicted Gene

Lj1g3v3137750.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137750.2 tr|G7J524|G7J524_MEDTR Argininosuccinate synthase
OS=Medicago truncatula GN=MTR_3g088970 PE=3 SV=1,85.53,0,seg,NULL;
ARGININOSUCCIN_SYN_1,Argininosuccinate synthase, conserved site;
ARGININOSUCCIN_SYN_2,Argi,CUFF.30157.2
         (476 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24830.1 | Symbols:  | arginosuccinate synthase family | chr4...   690   0.0  
AT4G24830.2 | Symbols:  | arginosuccinate synthase family | chr4...   593   e-170

>AT4G24830.1 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=494
          Length = 494

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/454 (71%), Positives = 385/454 (84%), Gaps = 5/454 (1%)

Query: 25  RFQHQFCKTNSLSSNELGPRTSVVGAR--KTQVIKAVLQDIQIPETKNV--TSLRGKLNK 80
           +FQ    K + L  N +     V G+R  K Q I+AVL       T +     LRGKL K
Sbjct: 40  QFQELSLKRSQLVGNAV-VTGHVTGSRSCKNQAIRAVLSGDGTALTTDSKEAGLRGKLKK 98

Query: 81  VVLAYSGGLDTSVVVPWLRENYGCDVVCFTADXXXXXXXXXXXXXXXXXSGASHLVVKDL 140
           VVLAYSGGLDTSV+VPWL+ENYGC+VVCFTAD                 SGAS LVVKDL
Sbjct: 99  VVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQGIKELEGLEQKAKASGASQLVVKDL 158

Query: 141 KEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKSMVDIAKEVGADAVSHGCTGKGND 200
            EEFV+D++FPCLRAGA+YERKYLLGT++ARPVIAK+MVD+A EVGADAV+HGCTGKGND
Sbjct: 159 TEEFVKDFIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVAHGCTGKGND 218

Query: 201 QVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHI 260
           QVRFEL+FF+LNP+L VVAPWREW+I GREDAIEYAKKHNVPVPVTKKSIYSRDRNLWH+
Sbjct: 219 QVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHL 278

Query: 261 THEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEIGIENGVPVSVNGKKLSPGNLVAK 320
           +HEG +LEDPANEPKKDMYM++VDPEDAP++PEY+EIGIE+G+PV++NGK LSP  L+A+
Sbjct: 279 SHEGDLLEDPANEPKKDMYMMSVDPEDAPDQPEYIEIGIESGLPVALNGKALSPATLLAE 338

Query: 321 LNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTILFDAVRDLECLTLDRETLQLKDTL 380
           LN I G+HGIGR+D+VE+R+VGMKSRGVYETPGGTILF AV++LE LTLDRE++Q+KDTL
Sbjct: 339 LNTIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTILFAAVQELESLTLDRESIQVKDTL 398

Query: 381 ALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVTLKLYKGSAAVTGRKSPYSLYRED 440
           ALKYAE+VYAGRWFDPLRES+DAFM+KITETTTGSVTLKLYKGS +VTGR+SP SLYR+D
Sbjct: 399 ALKYAEMVYAGRWFDPLRESMDAFMEKITETTTGSVTLKLYKGSVSVTGRQSPNSLYRQD 458

Query: 441 ISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQ 474
           ISSF+  ++YN ADA GFI+LYGLPM+IRAM+++
Sbjct: 459 ISSFEGSEIYNQADAAGFIRLYGLPMKIRAMLKK 492


>AT4G24830.2 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=450
          Length = 450

 Score =  593 bits (1530), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 289/454 (63%), Positives = 343/454 (75%), Gaps = 49/454 (10%)

Query: 25  RFQHQFCKTNSLSSNELGPRTSVVGAR--KTQVIKAVLQDIQIPETKNV--TSLRGKLNK 80
           +FQ    K + L  N +     V G+R  K Q I+AVL       T +     LRGKL K
Sbjct: 40  QFQELSLKRSQLVGNAV-VTGHVTGSRSCKNQAIRAVLSGDGTALTTDSKEAGLRGKLKK 98

Query: 81  VVLAYSGGLDTSVVVPWLRENYGCDVVCFTADXXXXXXXXXXXXXXXXXSGASHLVVKDL 140
           VVLAYSGGLDTSV+VPWL+ENYGC+VVCFTAD                 SGAS LVVKDL
Sbjct: 99  VVLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQGIKELEGLEQKAKASGASQLVVKDL 158

Query: 141 KEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKSMVDIAKEVGADAVSHGCTGKGND 200
            EEFV+D++FPCLRAGA+YERKYLLGT++ARPVIAK+MVD+A EVGADAV+HGCTGKGND
Sbjct: 159 TEEFVKDFIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVAHGCTGKGND 218

Query: 201 QVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHI 260
           QVRFEL+FF+LNP+L VVAPWREW+I GREDAIEYAKKHNVPVPVTKKSIYSRDRNLWH+
Sbjct: 219 QVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHL 278

Query: 261 THEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEIGIENGVPVSVNGKKLSPGNLVAK 320
           +HEG +LEDPANEPKKDMYM++VDPEDAP++PEY+EIGIE+G+PV++NGK LSP  L+A+
Sbjct: 279 SHEGDLLEDPANEPKKDMYMMSVDPEDAPDQPEYIEIGIESGLPVALNGKALSPATLLAE 338

Query: 321 LNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTILFDAVRDLECLTLDRETLQLKDTL 380
           LN I G+HGIGR+D+VE+R+VGMKSR                                  
Sbjct: 339 LNTIGGKHGIGRIDMVENRLVGMKSR---------------------------------- 364

Query: 381 ALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVTLKLYKGSAAVTGRKSPYSLYRED 440
                     GRWFDPLRES+DAFM+KITETTTGSVTLKLYKGS +VTGR+SP SLYR+D
Sbjct: 365 ----------GRWFDPLRESMDAFMEKITETTTGSVTLKLYKGSVSVTGRQSPNSLYRQD 414

Query: 441 ISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQ 474
           ISSF+  ++YN ADA GFI+LYGLPM+IRAM+++
Sbjct: 415 ISSFEGSEIYNQADAAGFIRLYGLPMKIRAMLKK 448