Miyakogusa Predicted Gene

Lj1g3v3137750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3137750.1 tr|G7J524|G7J524_MEDTR Argininosuccinate synthase
OS=Medicago truncatula GN=MTR_3g088970 PE=3 SV=1,90.64,0,argG:
argininosuccinate synthase,Argininosuccinate synthase;
ARGININOSUCCIN_SYN_2,Argininosuccinate ,CUFF.30157.1
         (299 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24830.1 | Symbols:  | arginosuccinate synthase family | chr4...   526   e-150
AT4G24830.2 | Symbols:  | arginosuccinate synthase family | chr4...   431   e-121

>AT4G24830.1 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=494
          Length = 494

 Score =  526 bits (1356), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 236/297 (79%), Positives = 280/297 (94%)

Query: 1   MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 60
           MVD+A EVGADAV+HGCTGKGNDQVRFEL+FF+LNP+L VVAPWREW+I GREDAIEYAK
Sbjct: 196 MVDVAAEVGADAVAHGCTGKGNDQVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAK 255

Query: 61  KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 120
           KHNVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++PEY+EI
Sbjct: 256 KHNVPVPVTKKSIYSRDRNLWHLSHEGDLLEDPANEPKKDMYMMSVDPEDAPDQPEYIEI 315

Query: 121 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 180
           GIE+G+PV++NGK LSP  L+A+LN I G+HGIGR+D+VE+R+VGMKSRGVYETPGGTIL
Sbjct: 316 GIESGLPVALNGKALSPATLLAELNTIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTIL 375

Query: 181 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 240
           F AV++LE LTLDRE++Q+KDTLALKYAE+VYAGRWFDPLRES+DAFM+KITETTTGSVT
Sbjct: 376 FAAVQELESLTLDRESIQVKDTLALKYAEMVYAGRWFDPLRESMDAFMEKITETTTGSVT 435

Query: 241 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQ 297
           LKLYKGS +VTGR+SP SLYR+DISSF+  ++YN ADA GFI+LYGLPM+IRAM+++
Sbjct: 436 LKLYKGSVSVTGRQSPNSLYRQDISSFEGSEIYNQADAAGFIRLYGLPMKIRAMLKK 492


>AT4G24830.2 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=450
          Length = 450

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/297 (67%), Positives = 238/297 (80%), Gaps = 44/297 (14%)

Query: 1   MVDIAKEVGADAVSHGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAK 60
           MVD+A EVGADAV+HGCTGKGNDQVRFEL+FF+LNP+L VVAPWREW+I GREDAIEYAK
Sbjct: 196 MVDVAAEVGADAVAHGCTGKGNDQVRFELTFFSLNPELKVVAPWREWEIQGREDAIEYAK 255

Query: 61  KHNVPVPVTKKSIYSRDRNLWHITHEGGVLEDPANEPKKDMYMITVDPEDAPNEPEYVEI 120
           KHNVPVPVTKKSIYSRDRNLWH++HEG +LEDPANEPKKDMYM++VDPEDAP++PEY+EI
Sbjct: 256 KHNVPVPVTKKSIYSRDRNLWHLSHEGDLLEDPANEPKKDMYMMSVDPEDAPDQPEYIEI 315

Query: 121 GIENGVPVSVNGKKLSPGNLVAKLNEIAGRHGIGRVDLVEDRIVGMKSRGVYETPGGTIL 180
           GIE+G+PV++NGK LSP  L+A+LN I G+HGIGR+D+VE+R+VGMKSR           
Sbjct: 316 GIESGLPVALNGKALSPATLLAELNTIGGKHGIGRIDMVENRLVGMKSR----------- 364

Query: 181 FDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMQKITETTTGSVT 240
                                            GRWFDPLRES+DAFM+KITETTTGSVT
Sbjct: 365 ---------------------------------GRWFDPLRESMDAFMEKITETTTGSVT 391

Query: 241 LKLYKGSAAVTGRKSPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQ 297
           LKLYKGS +VTGR+SP SLYR+DISSF+  ++YN ADA GFI+LYGLPM+IRAM+++
Sbjct: 392 LKLYKGSVSVTGRQSPNSLYRQDISSFEGSEIYNQADAAGFIRLYGLPMKIRAMLKK 448