Miyakogusa Predicted Gene
- Lj1g3v3116540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3116540.1 Non Chatacterized Hit- tr|I1N4W7|I1N4W7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2432
PE=,80.96,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.30111.1
(1114 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G67230.1 | Symbols: LINC1 | little nuclei1 | chr1:25151561-25... 780 0.0
AT1G13220.2 | Symbols: LINC2 | nuclear matrix constituent protei... 480 e-135
AT1G68790.1 | Symbols: LINC3 | little nuclei3 | chr1:25834932-25... 466 e-131
AT1G13220.1 | Symbols: LINC2 | nuclear matrix constituent protei... 248 3e-65
AT5G65770.3 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 238 1e-62
AT5G65770.1 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 238 1e-62
AT5G65780.2 | Symbols: ATBCAT-5 | branched-chain amino acid amin... 228 1e-59
AT5G65770.2 | Symbols: LINC4 | little nuclei4 | chr5:26311587-26... 226 6e-59
>AT1G67230.1 | Symbols: LINC1 | little nuclei1 |
chr1:25151561-25156032 REVERSE LENGTH=1132
Length = 1132
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/1124 (42%), Positives = 697/1124 (62%), Gaps = 62/1124 (5%)
Query: 1 MFTPQRVWQGWSLTPXXXXXXXXXXXXXXXDLGPESGDGAGSKGKGVAFVEN-GGNL--- 56
M TP +VWQ WS TP P+S S G G+ V G +
Sbjct: 1 MSTPLKVWQRWS-TPTKAT-------------NPDSN--GSSHGTGLDMVTPVSGRVSEI 44
Query: 57 ---DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAA 113
D +L E+IS LEKEL++YQ++MGLLLIEKKEW+S Y L Q EV + L++E+ A
Sbjct: 45 QFDDPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNA 104
Query: 114 HLIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTAS 173
HLIA+++ EKREE L+KALG+EK+C LDLEKAL+E+R+E+A+IKFTA+SKL EANAL S
Sbjct: 105 HLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRS 164
Query: 174 IEEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHEST 233
+EEKSLEVEAKLR+ DA+LAE+SRKSS++ERK++++EA+ES+L+RER S+I+E+EA E+T
Sbjct: 165 VEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSYIAEREADEAT 224
Query: 234 LSKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDAT 293
LSKQREDLREWE+KLQEGEER+AKSQ I+ +RE RANE+D+I +QK K+LEEAQK IDA
Sbjct: 225 LSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAA 284
Query: 294 NETLRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDE 353
N ++ EDDV+SR+ ++ L+E+E D L+ +++ K +EL EKL AREK+ +Q+LVDE
Sbjct: 285 NLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEAREKMAVQQLVDE 344
Query: 354 HNATLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXX 413
H A LD ++EF +E+E+KRKS +D LK+++ EVEK+E E H+EEKV
Sbjct: 345 HQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRKLE 404
Query: 414 XXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXX 473
+ + ++E +L+LKA VEK+
Sbjct: 405 KHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEIILNLKALVEKVSGENQA 464
Query: 474 XXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFERE 533
+VTEEERSEYLRLQ++LK +I++ R Q+ELL KEA+DL+ Q+E+FE+E
Sbjct: 465 QLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKE 524
Query: 534 WDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKES 593
W+ELD ++A + ELKN+ QKE++ + EEE+LK EK A + ++RELETL++AK S
Sbjct: 525 WEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAKAS 584
Query: 594 FAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKR 653
FA +E ++S L++KA++E++Q+L D E+RK +LE+DMQ LE+KE++L ++ LFEE+R
Sbjct: 585 FAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQAKKKLFEEER 644
Query: 654 ESELDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXX 713
E EL NIN+LRDVA REM +M+ +R ++EKEK E D +K HLE Q+TE+++D+
Sbjct: 645 EKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIRKDVDDLVALT 704
Query: 714 XXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLA 773
QREQFI ERSRF+ ++ R+C CGE++SE VL +I+NLE+P++ KLA
Sbjct: 705 KKLKEQREQFISERSRFLSSMESNRNCSRCGELLSELVL------PEIDNLEMPNMSKLA 758
Query: 774 GDVIQGGSEVNLASSRQMTGV-PPATDPKSPVSGGTISWLRKCTSKILKISPIRKIESED 832
+++ N A ++M + P A PV+GG +SW RKCTSK+LK+SPI+ E
Sbjct: 759 -NILD-----NEAPRQEMRDISPTAAGLGLPVTGGKVSWFRKCTSKMLKLSPIKMTEPSV 812
Query: 833 VSGSRDEATLFSEKADIEDPAGGIPGNENEVELSFAIVNDYFDARMLQSGNDIAEVEANH 892
D+ +E+A++ P+ + A FD + +S EVE +
Sbjct: 813 TWNLADQEPQSTEQANVGGPSTTVQ----------AATTYSFDVQKAESETGTKEVEVTN 862
Query: 893 DPSIDNQSNIDVSKAPEDVQPSDSK--VEKQKPXXXXXXXXVKRTQTVKAVLEEAKAILG 950
S +QS+I+ SKA E S S V+ Q +RT++VK V+++AKA+ G
Sbjct: 863 VNSDGDQSDIN-SKAQEVAADSLSNLDVDGQSRMKGKGKARTRRTRSVKDVVDDAKALYG 921
Query: 951 ES-NAAEVVPGESNAEDSANVISESQKPSNTRRPANVRKRNRVQTSQVTASGHDGDASEG 1009
ES N E N +DS + S+ N RKR RV + + + DG+ S+G
Sbjct: 922 ESINLYEPNDSTENVDDSTKASTGETGRSDKAISKNGRKRGRVGSLRTCTTEQDGNESDG 981
Query: 1010 HSDSLVLGXXXXXXXXXXXPPVQ---ISRETRYNLRRPKSGATSSARAMSGGGKESEGEV 1066
SDS+ G Q + + RYNLRRP+ + A+S ++ G
Sbjct: 982 KSDSVTGGAHQRKRRQKVASEQQGEVVGQ--RYNLRRPRR--VTGEPALSKKNEDIGG-- 1035
Query: 1067 DRVKDTEGNVYSKTSHSHSVGV-TNENGGSIDLEESHKVVGTQD 1109
V+ EG ++ + + SVGV ++NG S ++ + ++D
Sbjct: 1036 --VQQEEGIHCTQATATASVGVAVSDNGVSTNVVQHEATADSED 1077
>AT1G13220.2 | Symbols: LINC2 | nuclear matrix constituent
protein-related | chr1:4515699-4520071 FORWARD
LENGTH=1128
Length = 1128
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 315/778 (40%), Positives = 485/778 (62%), Gaps = 15/778 (1%)
Query: 57 DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
D+E L+E+IS LEKELY YQ+NMGLLL+E KE S + +L+Q E ++ L+RE+++HL
Sbjct: 81 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 140
Query: 117 ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
AL+ E+REENL+KALG+EK+CV +LEKALRE++ E++KI+ ++E+KLVEANAL AS+
Sbjct: 141 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 200
Query: 177 KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
+S +VE K+ SA+++LAE +RKSSE++ + +++E +ES L++ERLSF E+E++E T K
Sbjct: 201 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 260
Query: 237 QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
QRE L EWEKKLQ EE + + ++ LN+RE++ NE ++ + KEK+LEE + +D +
Sbjct: 261 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 320
Query: 297 LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEHNA 356
+ E+D+ RL +T KEKE +L++ L KE EL ++EKL ARE EIQKL+D+
Sbjct: 321 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQKLIDDQKE 380
Query: 357 TLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXXXX 416
L K EF +E EE RKS + L+ ++ E+E+++ EI H EEK+
Sbjct: 381 VLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVN 440
Query: 417 XXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXXXX 476
+ + S++E L L+ E+EKI+A
Sbjct: 441 EKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEE 500
Query: 477 XXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREWDE 536
++ +EER EYLRLQS+LK +I++ R+ +E L KE ++L+Q+KE FE+EW+
Sbjct: 501 MIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI 560
Query: 537 LDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESFAV 596
LD K+A KE + ++KE+ + Q E E+LK E+ A + +EL+ ++L +ESF
Sbjct: 561 LDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDDIRLQRESFEA 620
Query: 597 EIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRESE 656
+E ++S+L EK + E+++++ D E+ + LE ++Q + EQ EKDL +R FE+KR +E
Sbjct: 621 NMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERKEQDEKDLLDRMAQFEDKRMAE 680
Query: 657 LDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXXXX 716
L +IN + NREMEEM +RS L+KE +E ++K L+ Q+ EM DI
Sbjct: 681 LSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKLKEQQVEMHNDISELSTLSINL 740
Query: 717 XXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLAG-D 775
+RE F ERSRF+ FV KL+ C +CG+++++FVLS+LQ + N EV LP + +
Sbjct: 741 KKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDLQLPS---NDEVAILPPIGVLN 797
Query: 776 VIQGGSEVNLASSRQMTGVPPATDPKSPVSGG----TISWLRKCTSKILKISPIRKIE 829
+ G S N + S + + D + SGG ++S L+KCTS I SP +++E
Sbjct: 798 DLPGSS--NASDS---CNIKKSLDGDASGSGGSRRPSMSILQKCTSIIF--SPSKRVE 848
>AT1G68790.1 | Symbols: LINC3 | little nuclei3 |
chr1:25834932-25839157 REVERSE LENGTH=1085
Length = 1085
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 365/1047 (34%), Positives = 556/1047 (53%), Gaps = 117/1047 (11%)
Query: 57 DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
DR+ L+E+I LEKEL+DYQ+NMGLLLIEKK+W S +EL Q E + L+REK ++ I
Sbjct: 59 DRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEAMEMLKREKTSNAI 118
Query: 117 ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
L+EA+KREENL+KAL EK+ V +LE L+ + EH+ +K T+E+KL EANAL ++E
Sbjct: 119 TLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAKLEEANALVIGMKE 178
Query: 177 KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
K+LEV+ + A+ + + ++RKSSE+ERK +++E +E +RE LS ++E+EAHE+ K
Sbjct: 179 KALEVDRERAIAEEKFSVMNRKSSELERKLKEVETREKVHQREHLSLVTEREAHEAVFYK 238
Query: 237 QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
QREDL+EWEKKL E+RL++ ++ +N RE+R EN+R +KEK LE Q+ I
Sbjct: 239 QREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKILENLQQKISVAKSE 298
Query: 297 LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEHNA 356
L KE+ + +L +I+LKEK++++++ +D+KEKEL +++E L RE++EI KL+D+ A
Sbjct: 299 LTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIEREQMEIGKLLDDQKA 358
Query: 357 TLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXXXX 416
LD +++EF +ELE+ R+S ++ L+ + E+E+ + EISH EEK+
Sbjct: 359 VLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAKREAALEKKEEGVK 418
Query: 417 XXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXXXX 476
+ + ++E L LK E+E+I
Sbjct: 419 KKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTETTKQES 478
Query: 477 XXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREWDE 536
++T+EER E+LRLQS+LK +ID+ + ++ELLLKE ++L+Q KE FE+EW+
Sbjct: 479 RIREEHESLRITKEERVEFLRLQSELKQQIDKVKQEEELLLKEREELKQDKERFEKEWEA 538
Query: 537 LDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESFAV 596
LD KRA++ +E V ++ E++ LQ E+ +LK E++ + D ++REL+ +K+ KESF
Sbjct: 539 LDKKRANITREQNEVAEENEKLRNLQISEKHRLKREEMTSRDNLKRELDGVKMQKESFEA 598
Query: 597 EIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRESE 656
++E D E++K L+ + Q Q E E+D +ER +E++ + E
Sbjct: 599 DME-------------------DLEMQKRNLDMEFQRQEEAGERDFNERARTYEKRSQEE 639
Query: 657 LDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXXXX 716
LDNIN+ + +A REMEEM+ ++ LE+E+++ KK L+ Q EM +DI
Sbjct: 640 LDNINYTKKLAQREMEEMQYEKLALEREREQISVRKKLLKEQEAEMHKDITELDVLRSSL 699
Query: 717 XXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLAGDV 776
+R++FI ER RF+ F++KL+SC +CGE+ FVLS+L+ D+E+ GD
Sbjct: 700 KEKRKEFICERERFLVFLEKLKSCSSCGEITENFVLSDLR-LPDVED----------GDK 748
Query: 777 IQGGSEVNLASSRQMTGVPPATDPKSPVSGGTISWLRKCTSKILKISPIRKIESEDVSGS 836
G L + + P A + K S L K SK+L ISPI G
Sbjct: 749 RFGKQ--KLKAEEALNISPSAENSKR------TSLLGKIASKLLSISPI---------GK 791
Query: 837 RDEATLFSEKADIEDPAGGIPGNENEVELSFAIVNDYFDARMLQSGNDIAEVEANHDPSI 896
D+ T ++ P P +D D SG D H+PS
Sbjct: 792 TDKVTDLG--ITVKLPESSQP-------------DDSLDR---VSGED-------HEPSA 826
Query: 897 DNQSNID--VSKAPEDVQPSDSKVEK----QKPXXXXXXXXVKRTQTVKAVLEEAKAILG 950
QS D + + PE S+ K +K + R+Q KAV
Sbjct: 827 TEQSFTDSRIQEGPEGSLQSEMKSDKPRRGRGRGRGRGKSVRGRSQATKAV--------- 877
Query: 951 ESNAAEVVPGESNAEDSANVISESQKPSNTRRPANVRKRNRVQTSQVTASGH-DGDASEG 1009
S KPS+ P RKR R QTS++T S GD+ EG
Sbjct: 878 ---------------------SRDSKPSDGETP---RKRQREQTSRITESEQAAGDSDEG 913
Query: 1010 HSDSLVLGXXXXXXXXXXXPPVQISRETRYNLRRPKSGATSSARAMSGGGKESEGEVDRV 1069
DS+ G P Q +TRY LRR ++ T +A + G + E RV
Sbjct: 914 -VDSITTG-GRRKKRQIAVPVSQTPGQTRYQLRRHRNVGTEEDKAQASKGATEKQE--RV 969
Query: 1070 KDTEGNVYS-KTSHSHSVGVTNENGGS 1095
D V S K + + G ENG +
Sbjct: 970 NDDIRKVPSPKETRTPPEGENRENGKA 996
>AT1G13220.1 | Symbols: LINC2 | nuclear matrix constituent
protein-related | chr1:4515660-4517415 FORWARD
LENGTH=391
Length = 391
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 145/289 (50%), Positives = 216/289 (74%)
Query: 57 DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
D+E L+E+IS LEKELY YQ+NMGLLL+E KE S + +L+Q E ++ L+RE+++HL
Sbjct: 94 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 153
Query: 117 ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
AL+ E+REENL+KALG+EK+CV +LEKALRE++ E++KI+ ++E+KLVEANAL AS+
Sbjct: 154 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 213
Query: 177 KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
+S +VE K+ SA+++LAE +RKSSE++ + +++E +ES L++ERLSF E+E++E T K
Sbjct: 214 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 273
Query: 237 QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
QRE L EWEKKLQ EE + + ++ LN+RE++ NE ++ + KEK+LEE + +D +
Sbjct: 274 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 333
Query: 297 LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKV 345
+ E+D+ RL +T KEKE +L++ L KE EL ++EKL ARE V
Sbjct: 334 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGV 382
>AT5G65770.3 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315610 FORWARD LENGTH=1010
Length = 1010
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 224/785 (28%), Positives = 387/785 (49%), Gaps = 24/785 (3%)
Query: 55 NLDREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAH 114
N D+ L+ I+ LE E+YDYQ+NMGLLL+EK E +S Y E+ ++ E REK+A+
Sbjct: 56 NRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKSAY 115
Query: 115 LIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASI 174
+ AL+EA+KREE+LKK +G+ KEC+ LEK L EMR+E A+ K +A S + EA+ +
Sbjct: 116 VSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIEDA 175
Query: 175 EEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTL 234
+K + EAK+R+A+A AE +R ERK +++E++E L R SF SE E E+ +
Sbjct: 176 LKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKENEM 235
Query: 235 SKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATN 294
+R+ L E K LQ+ ERL +Q LN+RE + + EK L+ A+ +
Sbjct: 236 VIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEER 295
Query: 295 ETLRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEH 354
+ K+ ++ LA +E+ +L KE+EL +EK+ ++E IQ ++
Sbjct: 296 KAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESELIQNVLANQ 355
Query: 355 NATLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXX 414
L +K + ELE K KS E ++++ E +E +I E+ V
Sbjct: 356 EVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEHDLEVQSRA 415
Query: 415 XXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXX 474
+ +E E+E L L E+++
Sbjct: 416 LAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDK 475
Query: 475 XXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREW 534
+ + E SE L+ +LK E+D R QK +L EAD L+ +K FE EW
Sbjct: 476 RKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEAEW 535
Query: 535 DELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESF 594
+ +D+KR ++ KE + + +Q+E + E + +K E+ A + + ++E+L +E F
Sbjct: 536 EHIDVKREELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVESLNREREEF 595
Query: 595 AVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRE 654
++ + S K Q E+ LL E++K ELE ++N+ E+ E +R FE++++
Sbjct: 596 MNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQEKK 655
Query: 655 SELDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXX 714
E + I L+++A +E+E ++++ +L+ E+ E +++ ER+ E+++ +
Sbjct: 656 LEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQRE 715
Query: 715 XXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVP--SLPKL 772
QR ER +++L+ +N + + ++ +Q S NLE + L
Sbjct: 716 KLETQRHMLRAERDEIRHEIEELKKLENLKVALDDMSMAKMQLS----NLERSWEKVSAL 771
Query: 773 AGDVIQGGSEVNLASSRQMTGVPPATDPK-------------SPVSGGTISWLRKCTSKI 819
V+ E++L + GV ++ + +P S SW+++CT+ I
Sbjct: 772 KQKVVSRDDELDLQN-----GVSTVSNSEDGYNSSMERQNGLTPSSATPFSWIKRCTNLI 826
Query: 820 LKISP 824
K SP
Sbjct: 827 FKTSP 831
>AT5G65770.1 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315610 FORWARD LENGTH=1010
Length = 1010
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 224/785 (28%), Positives = 387/785 (49%), Gaps = 24/785 (3%)
Query: 55 NLDREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAH 114
N D+ L+ I+ LE E+YDYQ+NMGLLL+EK E +S Y E+ ++ E REK+A+
Sbjct: 56 NRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKSAY 115
Query: 115 LIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASI 174
+ AL+EA+KREE+LKK +G+ KEC+ LEK L EMR+E A+ K +A S + EA+ +
Sbjct: 116 VSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIEDA 175
Query: 175 EEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTL 234
+K + EAK+R+A+A AE +R ERK +++E++E L R SF SE E E+ +
Sbjct: 176 LKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKENEM 235
Query: 235 SKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATN 294
+R+ L E K LQ+ ERL +Q LN+RE + + EK L+ A+ +
Sbjct: 236 VIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEER 295
Query: 295 ETLRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEH 354
+ K+ ++ LA +E+ +L KE+EL +EK+ ++E IQ ++
Sbjct: 296 KAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESELIQNVLANQ 355
Query: 355 NATLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXX 414
L +K + ELE K KS E ++++ E +E +I E+ V
Sbjct: 356 EVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEHDLEVQSRA 415
Query: 415 XXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXX 474
+ +E E+E L L E+++
Sbjct: 416 LAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDK 475
Query: 475 XXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREW 534
+ + E SE L+ +LK E+D R QK +L EAD L+ +K FE EW
Sbjct: 476 RKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEAEW 535
Query: 535 DELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESF 594
+ +D+KR ++ KE + + +Q+E + E + +K E+ A + + ++E+L +E F
Sbjct: 536 EHIDVKREELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVESLNREREEF 595
Query: 595 AVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRE 654
++ + S K Q E+ LL E++K ELE ++N+ E+ E +R FE++++
Sbjct: 596 MNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQEKK 655
Query: 655 SELDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXX 714
E + I L+++A +E+E ++++ +L+ E+ E +++ ER+ E+++ +
Sbjct: 656 LEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQRE 715
Query: 715 XXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVP--SLPKL 772
QR ER +++L+ +N + + ++ +Q S NLE + L
Sbjct: 716 KLETQRHMLRAERDEIRHEIEELKKLENLKVALDDMSMAKMQLS----NLERSWEKVSAL 771
Query: 773 AGDVIQGGSEVNLASSRQMTGVPPATDPK-------------SPVSGGTISWLRKCTSKI 819
V+ E++L + GV ++ + +P S SW+++CT+ I
Sbjct: 772 KQKVVSRDDELDLQN-----GVSTVSNSEDGYNSSMERQNGLTPSSATPFSWIKRCTNLI 826
Query: 820 LKISP 824
K SP
Sbjct: 827 FKTSP 831
>AT5G65780.2 | Symbols: ATBCAT-5 | branched-chain amino acid
aminotransferase 5 / branched-chain amino acid
transaminase 5 (BCAT5) | chr5:26311587-26315610 FORWARD
LENGTH=1018
Length = 1018
Score = 228 bits (582), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 223/793 (28%), Positives = 387/793 (48%), Gaps = 32/793 (4%)
Query: 55 NLDREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAH 114
N D+ L+ I+ LE E+YDYQ+NMGLLL+EK E +S Y E+ ++ E REK+A+
Sbjct: 56 NRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKSAY 115
Query: 115 LIALSEAEKREENLKKALGVEKECVLD--------LEKALREMRSEHAKIKFTAESKLVE 166
+ AL+EA+KREE+LKK +G+ K+ +D LEK L EMR+E A+ K +A S + E
Sbjct: 116 VSALAEAKKREESLKKDVGIAKDLFIDFVLFFFSQLEKTLHEMRAECAETKVSAGSTMSE 175
Query: 167 ANALTASIEEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISE 226
A+ + +K + EAK+R+A+A AE +R ERK +++E++E L R SF SE
Sbjct: 176 AHVMIEDALKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSE 235
Query: 227 QEAHESTLSKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEA 286
E E+ + +R+ L E K LQ+ ERL +Q LN+RE + + EK L+ A
Sbjct: 236 CETKENEMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTA 295
Query: 287 QKNIDATNETLRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVE 346
+ + + K+ ++ LA +E+ +L KE+EL +EK+ ++E
Sbjct: 296 KTTFEEERKAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESEL 355
Query: 347 IQKLVDEHNATLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXX 406
IQ ++ L +K + ELE K KS E ++++ E +E +I E+ V
Sbjct: 356 IQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEH 415
Query: 407 XXXXXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEK 466
+ +E E+E L L E+++
Sbjct: 416 DLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQ 475
Query: 467 IKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQ 526
+ + E SE L+ +LK E+D R QK +L EAD L+ +
Sbjct: 476 SLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVE 535
Query: 527 KETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELET 586
K FE EW+ +D+KR ++ KE + + +Q+E + E + +K E+ A + + ++E+
Sbjct: 536 KAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVES 595
Query: 587 LKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERR 646
L +E F ++ + S K Q E+ LL E++K ELE ++N+ E+ E +R
Sbjct: 596 LNREREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDRE 655
Query: 647 NLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDI 706
FE++++ E + I L+++A +E+E ++++ +L+ E+ E +++ ER+ E+++ +
Sbjct: 656 KAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSV 715
Query: 707 XXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEV 766
QR ER +++L+ +N + + ++ +Q S NLE
Sbjct: 716 EELKVQREKLETQRHMLRAERDEIRHEIEELKKLENLKVALDDMSMAKMQLS----NLER 771
Query: 767 P--SLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPK-------------SPVSGGTISW 811
+ L V+ E++L + GV ++ + +P S SW
Sbjct: 772 SWEKVSALKQKVVSRDDELDLQN-----GVSTVSNSEDGYNSSMERQNGLTPSSATPFSW 826
Query: 812 LRKCTSKILKISP 824
+++CT+ I K SP
Sbjct: 827 IKRCTNLIFKTSP 839
>AT5G65770.2 | Symbols: LINC4 | little nuclei4 |
chr5:26311587-26315544 FORWARD LENGTH=1042
Length = 1042
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 226/812 (27%), Positives = 391/812 (48%), Gaps = 51/812 (6%)
Query: 55 NLDREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAH 114
N D+ L+ I+ LE E+YDYQ+NMGLLL+EK E +S Y E+ ++ E REK+A+
Sbjct: 56 NRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKSAY 115
Query: 115 LIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASI 174
+ AL+EA+KREE+LKK +G+ KEC+ LEK L EMR+E A+ K +A S + EA+ +
Sbjct: 116 VSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIEDA 175
Query: 175 EEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTL 234
+K + EAK+R+A+A AE +R ERK +++E++E L R SF SE E E+ +
Sbjct: 176 LKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKENEM 235
Query: 235 SKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATN 294
+R+ L E K LQ+ ERL +Q LN+RE + + EK L+ A+ +
Sbjct: 236 VIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEER 295
Query: 295 ETLRSKEDDVNSRLANITLKEK----EYDSLRM-----------------------NLDL 327
+ K+ ++ LA +E+ ++SL +L
Sbjct: 296 KAFEDKKSNLEIALALCAKREEVCFYSHNSLLFLVLHYRSSKKFLGDKIAVSERESSLLK 355
Query: 328 KEKELSDWDEKLNAREKVEIQKLVDEHNATLDVKKQEFGVELEEKRKSFEDGLKNRLVEV 387
KE+EL +EK+ ++E IQ ++ L +K + ELE K KS E ++++
Sbjct: 356 KEQELLVAEEKIASKESELIQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAW 415
Query: 388 EKKEDEISHLEEKVXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXX 447
E +E +I E+ V +
Sbjct: 416 ELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKT 475
Query: 448 XXIESEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEID 507
+E E+E L L E+++ + + E SE L+ +LK E+D
Sbjct: 476 TMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELD 535
Query: 508 QYRLQKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEE 567
R QK +L EAD L+ +K FE EW+ +D+KR ++ KE + + +Q+E + E +
Sbjct: 536 DLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERD 595
Query: 568 KLKNEKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNEL 627
+K E+ A + + ++E+L +E F ++ + S K Q E+ LL E++K EL
Sbjct: 596 NIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKREL 655
Query: 628 EADMQNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQE 687
E ++N+ E+ E +R FE++++ E + I L+++A +E+E ++++ +L+ E+ E
Sbjct: 656 EYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLE 715
Query: 688 TDENKKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMI 747
+++ ER+ E+++ + QR ER +++L+ +N +
Sbjct: 716 IKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELKKLENLKVAL 775
Query: 748 SEFVLSNLQSSADIENLEVP--SLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPK---- 801
+ ++ +Q S NLE + L V+ E++L + GV ++ +
Sbjct: 776 DDMSMAKMQLS----NLERSWEKVSALKQKVVSRDDELDLQN-----GVSTVSNSEDGYN 826
Query: 802 ---------SPVSGGTISWLRKCTSKILKISP 824
+P S SW+++CT+ I K SP
Sbjct: 827 SSMERQNGLTPSSATPFSWIKRCTNLIFKTSP 858