Miyakogusa Predicted Gene

Lj1g3v3105110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3105110.1 tr|C1MTI9|C1MTI9_MICPC DnaJ domain protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_58,33.2,1e-18,Chaperone J-domain,Heat shock protein
DnaJ, N-terminal; seg,NULL; DnaJ,Heat shock protein DnaJ,
N-te,CUFF.30102.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05345.1 | Symbols:  | Chaperone DnaJ-domain superfamily prot...   262   1e-70
AT2G42750.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    65   5e-11
AT5G23240.1 | Symbols:  | DNAJ heat shock N-terminal domain-cont...    56   1e-08

>AT3G05345.1 | Symbols:  | Chaperone DnaJ-domain superfamily protein
           | chr3:1522449-1523847 REVERSE LENGTH=244
          Length = 244

 Score =  262 bits (670), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 130/209 (62%), Positives = 154/209 (73%), Gaps = 4/209 (1%)

Query: 2   PLSTASAYAVLGVQHGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMIRRVIEAYRML 61
           PLS++S Y++LGV+  CS +E+KAAFRAKVKQ+HPDV +D ++  SD MIRR+I+AY ML
Sbjct: 39  PLSSSSPYSILGVEPSCSSSELKAAFRAKVKQYHPDVNKDGSN--SDIMIRRIIQAYEML 96

Query: 62  SNLSPSQIIEGECLDPFDTPECEAFDLFVNELYCVGKACSNSCVERAPHAFTYVSSTGTA 121
           +N S S+IIEGECLDPFD PECEA D+FVNE+ CVGK CS  C E A H F+   S+GTA
Sbjct: 97  TNYSRSEIIEGECLDPFDHPECEALDVFVNEVLCVGKRCSYPCFETASHVFS-CDSSGTA 155

Query: 122 RASSQGRGEDYQVQQAVGQCPRNCIHYVTPSQRXXXXXXXXXXXXAPYDISAEADLLYSL 181
           RA SQG GEDY+VQ AV QCPRNCIHYVTPSQR             PYD SAEA+ LY+L
Sbjct: 156 RAMSQGHGEDYRVQSAVNQCPRNCIHYVTPSQRIILEELLDSVVDKPYDCSAEAEFLYAL 215

Query: 182 ITKAKFENNRYXX-XXXXXXTSTQHVDWF 209
           I KAKFENNRY         +S +HVDWF
Sbjct: 216 IVKAKFENNRYQKPKKKQPESSGKHVDWF 244


>AT2G42750.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr2:17793404-17795419
           FORWARD LENGTH=344
          Length = 344

 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 9   YAVLGVQHGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMIRRVIEAYRMLSNLSPSQ 68
           YAVLG+    +  EIK A+   +K  HPD+    ND ++ +    + + Y +LS+     
Sbjct: 78  YAVLGLLPDATQEEIKKAYYNCMKSCHPDL--SGNDPETTNFCMFINDIYEILSDPVQRM 135

Query: 69  I---IEG---ECLDPFDTPECEAFDLFVNELYCVGKACSNSCVERAPHAFTYVSSTGTAR 122
           +   I G     ++PF         +FV+E  C+G  C N C   AP  F      G AR
Sbjct: 136 VYDEIHGYTVTAINPFLDDSTPRDHVFVDEFACIG--CKN-CANVAPDIFQIEEDFGRAR 192

Query: 123 ASSQGRGEDYQVQQAVGQCPRNCIHYVTPSQ 153
           A +Q RG    VQQAV  CP +CIH  + +Q
Sbjct: 193 ACNQ-RGNPDLVQQAVETCPVDCIHQTSAAQ 222


>AT5G23240.1 | Symbols:  | DNAJ heat shock N-terminal
           domain-containing protein | chr5:7826857-7828534 REVERSE
           LENGTH=465
          Length = 465

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 21/155 (13%)

Query: 9   YAVLGVQHGCSGAEIKAAFRAKVKQFHPDVIRDENDRDSDSMIRRVIEAYRMLSNLSPSQ 68
           Y +LG+      ++IK+A+RA  K+ HPD+  D        M   + EAY++LS+    Q
Sbjct: 52  YDLLGIDRSSDKSQIKSAYRALQKRCHPDIAGDPG----HDMAIILNEAYQLLSDPISRQ 107

Query: 69  I----------IEGECLDPFDT----PECEAFDLFVNELYCVGKACSNSCVERAPHAFTY 114
                      + G    P  +    PE E    FV+E+ CVG      C E+    F  
Sbjct: 108 AYDKEQAKLEELRGYTGKPIYSVWCGPETEQRAAFVDEVKCVGCLKCALCAEK---TFAI 164

Query: 115 VSSTGTARASSQGRGEDYQVQQAVGQCPRNCIHYV 149
            ++ G AR  +Q    + ++++A+  CP +CI  V
Sbjct: 165 ETAYGRARVVAQWADPESKIKEAIEACPVDCISMV 199