Miyakogusa Predicted Gene

Lj1g3v3103940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3103940.1 tr|G7KSU9|G7KSU9_MEDTR Protein YIF1B-B
OS=Medicago truncatula GN=MTR_7g020800 PE=4 SV=1,85.39,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.30054.1
         (267 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59500.1 | Symbols:  | Integral membrane HRF1 family protein ...   363   e-101
AT1G30890.2 | Symbols:  | Integral membrane HRF1 family protein ...   358   2e-99
AT1G30890.1 | Symbols:  | Integral membrane HRF1 family protein ...   358   2e-99

>AT3G59500.1 | Symbols:  | Integral membrane HRF1 family protein |
           chr3:21987110-21988169 FORWARD LENGTH=269
          Length = 269

 Score =  363 bits (932), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/267 (66%), Positives = 206/267 (77%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNN+ P+ GM             +  G+ F+               EKIFGSSS+YVQS
Sbjct: 1   MYNNMGPRPGMAMPQANPQP----SPFGNPFSGPGSGLIRSGLGAYGEKIFGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN  YV+NKLK+VL PFLHRGHWTRI+EPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDQYVRNKLKIVLLPFLHRGHWTRISEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP+MAFGTYV+LAG+SLG +GKF+PEALNWLF+KG++GW +Q  LLK TL+ LGSGE
Sbjct: 117 DLYIPLMAFGTYVVLAGLSLGLYGKFTPEALNWLFVKGMVGWFLQVMLLKITLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+V+YAGY F GLCLAVLG+I+ GYSYY+L+PWTCLC GVFLVKTMKRVLFAE RS
Sbjct: 177 APLLDIVAYAGYTFTGLCLAVLGKIIWGYSYYVLIPWTCLCTGVFLVKTMKRVLFAESRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSS+HHY+             WLGNI
Sbjct: 237 YDSSRHHYLLIFVALAQFPLLIWLGNI 263


>AT1G30890.2 | Symbols:  | Integral membrane HRF1 family protein |
           chr1:10994890-10995999 FORWARD LENGTH=269
          Length = 269

 Score =  358 bits (918), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 200/267 (74%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNN+ PQ GM                G+ F                E+I GSSS+YVQS
Sbjct: 1   MYNNMGPQPGMPRPPGNPEP----GPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN  YV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP MAFGTYV+LAG+SLG +GKF+PEALNWLF+KGL+GW +Q  LLK TL+ LGSGE
Sbjct: 117 DLYIPFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+V+Y GYAF GLCLA   +I+ GYSYY LMPWTCLC G+FLVKTMKRVLFAEVRS
Sbjct: 177 APLLDIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+             WLGNI
Sbjct: 237 YDSSKHHYLLLFLALVQFPLLIWLGNI 263


>AT1G30890.1 | Symbols:  | Integral membrane HRF1 family protein |
           chr1:10994890-10995999 FORWARD LENGTH=269
          Length = 269

 Score =  358 bits (918), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 179/267 (67%), Positives = 200/267 (74%), Gaps = 4/267 (1%)

Query: 1   MYNNVRPQLGMXXXXXXXXXXXXXNVLGSAFNTXXXXXXXXXXXXXXEKIFGSSSDYVQS 60
           MYNN+ PQ GM                G+ F                E+I GSSS+YVQS
Sbjct: 1   MYNNMGPQPGMPRPPGNPEP----GPFGNPFTGAGSGFIRGGLGAYGERILGSSSEYVQS 56

Query: 61  NISRYFSDPQYYFQVNGHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120
           NISRYFSDPQYYFQVN  YV+NKLKVVLFPFLHRGHWTRI+EPVGGRLSYKPPIYDINAP
Sbjct: 57  NISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYKPPIYDINAP 116

Query: 121 DLYIPMMAFGTYVILAGISLGFHGKFSPEALNWLFIKGLIGWVMQTALLKGTLVLLGSGE 180
           DLYIP MAFGTYV+LAG+SLG +GKF+PEALNWLF+KGL+GW +Q  LLK TL+ LGSGE
Sbjct: 117 DLYIPFMAFGTYVVLAGLSLGLNGKFTPEALNWLFVKGLVGWFLQVMLLKVTLLSLGSGE 176

Query: 181 AAILDMVSYAGYAFPGLCLAVLGRILGGYSYYILMPWTCLCMGVFLVKTMKRVLFAEVRS 240
           A +LD+V+Y GYAF GLCLA   +I+ GYSYY LMPWTCLC G+FLVKTMKRVLFAEVRS
Sbjct: 177 APLLDIVAYGGYAFAGLCLAGFAKIMWGYSYYALMPWTCLCTGIFLVKTMKRVLFAEVRS 236

Query: 241 YDSSKHHYVXXXXXXXXXXXXTWLGNI 267
           YDSSKHHY+             WLGNI
Sbjct: 237 YDSSKHHYLLLFLALVQFPLLIWLGNI 263