Miyakogusa Predicted Gene
- Lj1g3v3103820.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3103820.1 tr|G7K4K1|G7K4K1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,23.15,3e-18,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
SUBFAMI,CUFF.30043.1
(637 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 615 e-176
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 597 e-170
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 2e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 4e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 7e-13
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 72 2e-12
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 71 2e-12
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 67 5e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 66 1e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 61 2e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 7e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 4e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 49 9e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:513607-515604 FORWARD
LENGTH=665
Length = 665
Score = 615 bits (1585), Expect = e-176, Method: Compositional matrix adjust.
Identities = 305/588 (51%), Positives = 421/588 (71%), Gaps = 10/588 (1%)
Query: 51 RHFSSDPVLEQPDPDHAIIADLFSKPAADPSVVKSQLDSNRVSINHDAVIAELLKLESSP 110
R FSS+ +E+ P ++ D+FS+ + K +LDSN V I+H+ + L +LESSP
Sbjct: 66 RRFSSESAIEEKLPAETVVIDVFSRLNGKDEITK-ELDSNDVVISHELALRVLRELESSP 124
Query: 111 EVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKER 170
+VA RFF+W LE +P+ LSSKSYN MLR G NGLVDEFW +V MK+KG+GVS V++R
Sbjct: 125 DVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDR 184
Query: 171 ALECFEKNGLEGDVVRLKALFDKNNC-NSVEKDCARVCRIVRNNVWGDDVEREIKDLNVG 229
+ F+K+GLE D+ RLK LF + NSV+K C RVC+IV VWG DVE++++DL +
Sbjct: 185 VGDKFKKDGLENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLE 244
Query: 230 FSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLV 289
F S+VVK+VLE L +P KAL+FFRW++ESG KHD TYNAMARV+G+E +DRF ++
Sbjct: 245 FKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMI 304
Query: 290 GDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAG--ADKPTPQCCTFLLKKVV 347
++R AG+EME+ET+V+V RFC+ +MIK+AVEL+EFAMAG ++ PTP CC+ LLKK+V
Sbjct: 305 EEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIV 364
Query: 348 TCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVAS 407
T K+LDMDLF+R +K ++G+GN +P+ M+ VLKSL SV R G+ N+VLK M + GYV S
Sbjct: 365 TAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPS 424
Query: 408 ANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFK 467
+ QS IA L G+K++ANE VN +EA+G+ D + SLV GHC A +L++A + FK
Sbjct: 425 GDLQSVIASGLSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFK 484
Query: 468 EMVKKEGISYAG-AFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLA 526
+M+ KEG+SYAG AF+ L+ +YCN +A D YK+ ELVK+ +LKP H TYK++V LL
Sbjct: 485 KMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLM 544
Query: 527 Q-----GGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTS 581
+ GGF +AL++ +M+ HGFPPF+DPF+ ++S G+ +A FL A+T KKFPS S
Sbjct: 545 KKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNS 604
Query: 582 VYLRMFEAFFKKRRPEEAQNFLSKCPRYIRNHADVLNLFCSMNSKEAS 629
+ LR+FEA K R EAQ+ LS P YIR +A+VL LF +M ++ S
Sbjct: 605 MVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKPEKCS 652
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 300/598 (50%), Positives = 422/598 (70%), Gaps = 13/598 (2%)
Query: 51 RHFSSDPVLEQPDPDHAIIADLFSKPAADPSVVKSQLDSNRVSINHDAVIAELLKLESSP 110
R FSS+P +E+ A + D+FS+ + + + K +L+S+ V I+ D + L KLES+P
Sbjct: 72 RSFSSEPAVEEKSSAEATVIDIFSRLSGEDEIRK-ELESSGVVISQDLALKVLRKLESNP 130
Query: 111 EVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKER 170
+VA+ FF+W+ E PE LSSK+YN MLR LG NGLVDEFW +V VMK+KG+G+S V+++
Sbjct: 131 DVAKSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDK 190
Query: 171 ALECFEKNGLEGDVVRLKALFDKNNC--NSVEKDCARVCRIVRNNVWGDDVEREIKDLNV 228
+ F+K+GLE D++RL+ LF ++C NS E C RVC+IV WGDDVE+ ++DLNV
Sbjct: 191 VGDKFQKDGLESDLLRLRKLF-TSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNV 249
Query: 229 GFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKL 288
F S++VK+++E L EP KAL+FFRW++ES L KHD TYNAMARV+G+E +DRF +
Sbjct: 250 EFKSDLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNI 309
Query: 289 VGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAG---ADKPTPQCCTFLLKK 345
V +MR AG+E+EIET+V+V RFC+ ++IK+AV+L+E AMAG ++ PTP C LLKK
Sbjct: 310 VVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKK 369
Query: 346 VVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYV 405
+VT K LDMDLFSR VKV++ +GNA+ +S++ +VLKSL SV R+ + N++LKEM+ GYV
Sbjct: 370 IVTAKILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYV 429
Query: 406 ASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDS 465
S + QS IA L G+K++A+EFV+ +E++G++ D + SLV G+C +GNLD+AL
Sbjct: 430 PSGDMQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVC 489
Query: 466 FKEMVKKEGISYAG-AFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKL 524
F++MV G+SYA +F+ L+ +YCN N+ DAYK+L V + +LKPRH TYK LV+ L
Sbjct: 490 FEKMVGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNL 549
Query: 525 LAQ-----GGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGDDAVQFLSAMTYKKFPS 579
L + GGF +AL++ +MK HGFPPFIDPF+ + S G +A+ FL AMT FP
Sbjct: 550 LTKKIARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPY 609
Query: 580 TSVYLRMFEAFFKKRRPEEAQNFLSKCPRYIRNHADVLNLFCSMNSKEASSSSGMLAA 637
SV LR+FE K R EAQ+ LS CP YIRN+ DVL LF +M E++ + A+
Sbjct: 610 ISVVLRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESAVEKPLAAS 667
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 277/535 (51%), Gaps = 8/535 (1%)
Query: 92 VSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWE 151
+S+ H+ I L KLE PE A F WVL S+ Y+ MLR L + FW
Sbjct: 85 MSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWM 144
Query: 152 MVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALFD---KNNCNSVEKDCARVCR 208
+ MK+ G+ + + K + D V + ++ K N SV V
Sbjct: 145 TLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVAHFYERMLKENAMSVV--AGEVSA 202
Query: 209 IVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLC---KHD 265
+V W +VERE++++ + S V VL+ L P KAL FF WV G +H
Sbjct: 203 VVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGYQHS 262
Query: 266 GCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE 325
TYNA RV+ R +++ FW +V +M+ AG++M+++T++KV +F K RM+ + V+LYE
Sbjct: 263 TVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYE 322
Query: 326 FAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTS 385
+ M G KP+ Q C+ LL+ + D+DL RV + + +G ++ ++ D + +SLTS
Sbjct: 323 YMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 386 VGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEI 445
VGR E ++ K M + GY S++ F L E+A ++++EA G D +
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 446 WDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELV 505
W L+ GHC LDKAL F M++K + D LI + N+ A L E+V
Sbjct: 443 WTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMV 502
Query: 506 KEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGDDA 565
K +KP TYKLL+ KLL +AL++ +MK +P + + F +++K G+ +DA
Sbjct: 503 KNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDA 562
Query: 566 VQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSKCPRYIRNHADVLNLF 620
+FL ++ K PS + Y + EAF+++ R +A+N L CP + + H + LF
Sbjct: 563 KKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKISELF 617
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 206 VCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWV-EESGLCKH 264
+ ++V N W +VE ++ ++ + E VL L P KA F WV +SGL
Sbjct: 63 MLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLSPS 122
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
Y+ M R++ ++ ++ RFW + +M+ GF ++ +T+ + G K + DAV +
Sbjct: 123 TPL-YSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAVA 181
Query: 325 EF 326
F
Sbjct: 182 HF 183
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 170/399 (42%), Gaps = 11/399 (2%)
Query: 206 VCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHD 265
+C ++ WG E + L+ E V VL L + ++A+ +FRW E H
Sbjct: 39 ICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRL-KDVNRAIEYFRWYERRTELPHC 97
Query: 266 GCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE 325
+YN++ V+ R D +++G+M AGF + T ++++ K +++ ++ +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 326 FAMAGADKPTPQCCTFLLKKVVTCKELDM--DLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+P T L+ DM LF ++ ++ G + +++
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL----GYEPTVHLFTTLIRGF 213
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
GR+ +L EM+ A + G VG+ + A +F + IEA G D+
Sbjct: 214 AKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
+ S++ C A LD+A++ F+ + K + A++++I Y + + +AY +L E
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL-E 332
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPF--IDPFIRHISKRGS 561
+ K P Y +++ L G +AL VF MK P + I + + G
Sbjct: 333 RQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK 392
Query: 562 GDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D A + +M FP+ M + K ++ +EA
Sbjct: 393 LDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/494 (21%), Positives = 207/494 (41%), Gaps = 42/494 (8%)
Query: 113 AQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERAL 172
+++ + L + + L+ +YNA++ A N +++ +++ M++ GY
Sbjct: 180 SEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGY----------- 228
Query: 173 ECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSS 232
+ D V +L ++ S + D + R+ + ++ER+ +L+V +
Sbjct: 229 --------QSDFVNY-SLVIQSLTRSNKIDSVMLLRLYK------EIERDKLELDVQLVN 273
Query: 233 EVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDM 292
+++ +S +PSKAL + +GL + ++ + T++ L ++
Sbjct: 274 DIIMGFAKS--GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA-EALFEEL 330
Query: 293 RGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKEL 352
R +G + + +L + K +KDA + P + L+ V
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 353 DMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNK---VLKEMEDCGYVASAN 409
+ +R+V +G+ PNS V + L L GEW K VLKEM+ G
Sbjct: 391 ES---ARIVLKEMEAGDVQPNSFVFSRL--LAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 410 WQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM 469
+ + + G + A +R+ + G + D+ W++L+ HC G A + F+ M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 470 VKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGG 529
++ + A ++ +I+SY + R D ++L ++ K + + P T+ LV G
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKM-KSQGILPNVVTHTTLVDVYGKSGR 564
Query: 530 FTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLR 585
F DA+ MK+ G P + I ++RG + AV MT PS
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 586 MFEAFFKKRRPEEA 599
+ AF + RR EA
Sbjct: 625 LINAFGEDRRDAEA 638
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 175/402 (43%), Gaps = 14/402 (3%)
Query: 205 RVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPS--KALIFFRWVEESGLC 262
R+C+ N+ D+ R++++ N+ S +V++SL + S AL F +E G+
Sbjct: 219 RLCK-SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI- 276
Query: 263 KHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVE 322
K D TY+++ + + D K++ +M G ++ TF ++ F K + +A E
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKS 382
LY + P L+ CKE + +++ + G ++ S
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGF--CKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 383 LTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSD 442
R+ + ++ +E+ G + + + + G+ A E + + G
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 443 QEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILC 502
+ L+ G C G L+KAL+ F++M K G ++ +I CN ++ DA+ + C
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 503 ELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKR--- 559
L +K +KP TY +++ L +G ++A +F MK G P D F +I R
Sbjct: 515 SL-SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP--DDFTYNILIRAHL 571
Query: 560 -GSG-DDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEA 599
GSG +V+ + M F + S ++M RR +++
Sbjct: 572 GGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKS 613
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 142/363 (39%), Gaps = 12/363 (3%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
L F + +E +G+ +HD T M R+ + + ++G G+E + TF ++
Sbjct: 89 VLGFCKGMELNGI-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLV 147
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSG 366
FC + +AV L + + +P + L+ + + + L R+V+
Sbjct: 148 NGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY--- 204
Query: 367 SGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
G VL L G + ++ME+ AS S + L G +
Sbjct: 205 -GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
A N +E G +D + SL+ G C G D +EM+ + I F +LI
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFP 546
+ + ++A ++ E++ + + P TY L+ + +A +F LM + G
Sbjct: 324 VFVKEGKLLEAKELYNEMIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 547 PFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNF 602
P I + I K DD ++ ++ K P+T Y + F + + A+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 603 LSK 605
+
Sbjct: 443 FQE 445
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 199/477 (41%), Gaps = 69/477 (14%)
Query: 123 THPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGY--GV-----------SRGVKE 169
+P++++ YN ++ A + GL++E +E+++ M KG+ GV G E
Sbjct: 266 VYPDIVT---YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 170 RALECFE---KNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDL 226
RA E F ++GL D ++L + + C + + V+ D R++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSL--------LMEACKKGDVVETEKVFSDMRSRDVVPD 374
Query: 227 NVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFW 286
V FSS + L + KAL++F V+E+GL D Y + + R+ I
Sbjct: 375 LVCFSS---MMSLFTRSGNLDKALMYFNSVKEAGLIP-DNVIYTILIQGYCRKGMISVAM 430
Query: 287 KLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLK-- 344
L +M G M++ T+ +L CKR+M+ +A +L+ A P T L+
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 345 -----------------------KVVTCKELDMDLFSRVVKVFSG--------SGNAIPN 373
VVT L +D F +V + + S +P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTL-LDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 374 SMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVN 432
+ ++L +L S G + E +V EM + + + G F+
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 433 RIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEG--ISYAGAFDSLISSYCN 490
++ + G D +++L+ G N+ KA K+M +++G + ++S++ +C
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 491 MNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
N+ +A +L +++ E+ + P TY +++ ++Q T+A + M GF P
Sbjct: 670 QNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 186/464 (40%), Gaps = 57/464 (12%)
Query: 215 WGDDVEREIKDLNVGFSSEVVKLVLESL--GSEPSKALIFFRWVEESGLCKHDGCTYNAM 272
WG V +EI VG + + +++ +L + K F V+E G+ D TYN +
Sbjct: 220 WG--VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP-DIVTYNTL 276
Query: 273 ARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY-EFAMAGA 331
+ ++ ++L+ M G GF + T+ V+ CK + A E++ E +G
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 332 DKPTPQCCTFLLKKVVTCKELDM-----------------DL--FSRVVKVFSGSGNA-- 370
+P T+ + CK+ D+ DL FS ++ +F+ SGN
Sbjct: 337 ---SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 371 -------------IPNSMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAF 416
IP++++ +L + G I + EM G + I
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 417 RLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS 476
L +A++ N + D L+ GHC GNL A++ F++M +K
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 477 YAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNV 536
+++L+ + + A +I ++V KE+ P +Y +LV+ L ++G +A V
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMV-SKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 537 FGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFK 592
+ M + P + + I+ + G+ D FL M + F P Y + F +
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 593 KRRPEEAQNFLSKCPRY-------IRNHADVLNLFCSMNS-KEA 628
+ +A + K + + +L+ FC N KEA
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 173/438 (39%), Gaps = 58/438 (13%)
Query: 195 NCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFR 254
+ N +D R+C+I+ VE + + +V S +++ VL+ L + AL F+
Sbjct: 58 SANDASQDAERICKIL-TKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFK 116
Query: 255 WVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKR 314
W E KH YNA+ +G+ W LV DM+ + ETF + R+ +
Sbjct: 117 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARA 175
Query: 315 RMIKDAV------ELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
R +K+A+ E + F M +D F+R++ S S
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSD------------------------FNRMLDTLSKSR 211
Query: 369 NA---------IPNSMVDAVLKSLT----------SVGRIGEWNKVLKEMEDCGYVASAN 409
N + + +KS T ++ R+ E N +EM+D G+
Sbjct: 212 NVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVN---REMKDEGFEPDVV 268
Query: 410 WQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM 469
I + E+A F N +E I+ SL+ G L+ AL+ F E
Sbjct: 269 AYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFF-ER 327
Query: 470 VKKEGISY-AGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQG 528
K G A +++L+ +YC R DAYK + E+ + K + P TY +++ L+
Sbjct: 328 SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM-RLKGVGPNARTYDIILHHLIRMQ 386
Query: 529 GFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGDDAVQFLSAMTYKK-FPSTSVYLRMF 587
+A V+ M + +R + D A++ M K P ++ +
Sbjct: 387 RSKEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLI 446
Query: 588 EAFFKKRRPEEAQNFLSK 605
A + + +EA + ++
Sbjct: 447 TALCHENKLDEACEYFNE 464
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 161/437 (36%), Gaps = 96/437 (21%)
Query: 81 SVVKSQLDSNRVSINHDAVIAELLK-LESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRA 139
S V++ L+ V ++ A+I E+LK L ++ +A F+W ++ +YNA++ +
Sbjct: 79 SKVETLLNEASVKLS-PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIES 137
Query: 140 LGANGLVDEFWEMVSVMKRKG-------------YGVSRGVKE----------------- 169
LG W +V MK K Y +R VKE
Sbjct: 138 LGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMES 197
Query: 170 ----RALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWG--------D 217
R L+ K+ GD + +FDK E D ++ WG D
Sbjct: 198 SDFNRMLDTLSKSRNVGDA---QKVFDKMKKKRFEPDIKSYTILLEG--WGQELNLLRVD 252
Query: 218 DVEREIKDLNVGFSSEVVKL-------------------------------------VLE 240
+V RE+KD GF +VV ++
Sbjct: 253 EVNREMKD--EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLIN 310
Query: 241 SLGSEP--SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFE 298
LGSE + AL FF + SG + TYNA+ ++ +K V +MR G
Sbjct: 311 GLGSEKKLNDALEFFERSKSSGF-PLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 299 MEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFS 358
T+ +L + + K+A E+Y+ P T+ + + C + +D+
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYEVYQTMSC-----EPTVSTYEIMVRMFCNKERLDMAI 424
Query: 359 RVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRL 418
++ G G M +++ +L ++ E + EM D G + S + L
Sbjct: 425 KIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTL 484
Query: 419 GAVGEKEQANEFVNRIE 435
G K++ + V +++
Sbjct: 485 LDEGRKDKVTDLVVKMD 501
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 161/396 (40%), Gaps = 50/396 (12%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
AL FF+ + S L KH T+ M R + + +D L+ M+ GF + F+ V+
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 309 GRFCKRRMIKDAVEL-YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGS 367
+ + + + AVE+ Y G D P+ + +L ++ E + + V +
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCD-PSVKIYNHVLDTLL--GENRIQMIYMVYRDMKRD 175
Query: 368 GNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
G PN + +LK+L ++ K+L EM + G A + + + VG ++
Sbjct: 176 GFE-PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
E R E S ++++L+ G C + A + +EMV+K ++ +LI+
Sbjct: 235 GRELAERFEPVVS-----VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 487 SYCNMNRAIDAYKILCELVKEK-----------------------------------ELK 511
CN + A+ L +++K L+
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 512 PRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQF 568
P Y LV + G A++VF M+ G P I + I +KRGS D AV
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 569 LSAM-TYKKFPSTSVYLRMFEAFFKKRRPEEAQNFL 603
+ M T P+ VY M EA + + +EA++ +
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI 445
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 15/337 (4%)
Query: 243 GSE-PSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEI 301
GSE S+AL + +EE+G+ K + TY + + + ++ +L+G M G +
Sbjct: 335 GSERKSEALNLVKEMEETGI-KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 302 ETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCK---ELDMDLFS 358
T+ ++ +CKR MI+DAV++ E + P + L+K CK M + +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY--CKSNVHKAMGVLN 451
Query: 359 RVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRL 418
++++ NS++D +S G ++L M D G V + + L
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRS----GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 419 GAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYA 478
E+A + + +E G + + ++ +L+ G+C AG +D+A ++M+ K + +
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 479 GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFG 538
F++LI C + +A +L E + + L+P T +L+ +LL G F A + F
Sbjct: 568 LTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 539 LMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAM 572
M + G P FI+ + G DA ++ M
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM 663
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 111/257 (43%), Gaps = 44/257 (17%)
Query: 377 DAVLKSLTSVGRIGEWNKVLKEM-ED--CGYVASANWQSEIAFRLGAVGEKEQANEFVNR 433
+ +L SL G + E +V EM ED C + + N +LG V E+AN++V++
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNV---EEANQYVSK 243
Query: 434 IEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC---N 490
I AG D D + SL++G+C +LD A F EM K A+ LI C
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 491 MNRAIDAY-------------------KILC---------ELVKEKE---LKPRHDTYKL 519
++ A+D + K LC LVKE E +KP TY +
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 520 LVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYKK 576
L+ L +Q F A + G M G P + + I KRG +DAV + M +K
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423
Query: 577 F-PSTSVYLRMFEAFFK 592
P+T Y + + + K
Sbjct: 424 LSPNTRTYNELIKGYCK 440
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 122/584 (20%), Positives = 232/584 (39%), Gaps = 61/584 (10%)
Query: 34 LPHRPTPNFTFPANPSLRHFSS-DPVLE---QPDPDHAIIADLFSKPAADPSVVKSQLDS 89
L + + + T P+ + R F S P+L + + D + + P+ KS
Sbjct: 23 LKKKFSTDVTVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSILSKPNWHKSPSLK 82
Query: 90 NRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEF 149
+ VS + ++ L L+ P+ A F W+ + S SY ++L L NG V
Sbjct: 83 SMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYV--- 139
Query: 150 WEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRI 209
G V +++ L K+ C+SV D V +
Sbjct: 140 --------------------------------GVVFKIRLLMIKS-CDSV-GDALYVLDL 165
Query: 210 VRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTY 269
R + E + K L +G + ++ L G ++ +E+ +C + TY
Sbjct: 166 CRKMNKDERFELKYK-LIIGCYNTLLN-SLARFGLVDEMKQVYMEMLEDK-VCPNIY-TY 221
Query: 270 NAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY-EFAM 328
N M + ++ + V + AG + + T+ ++ +C+R+ + A +++ E +
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 329 AGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVL-KSLTS 385
G + T L+ + + +D MDLF ++ P VL KSL
Sbjct: 282 KGCRR-NEVAYTHLIHGLCVARRIDEAMDLFVKM-----KDDECFPTVRTYTVLIKSLCG 335
Query: 386 VGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEI 445
R E ++KEME+ G + + + + L + + E+A E + ++ G +
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 446 WDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELV 505
+++L+ G+C G ++ A+D + M ++ ++ LI YC N A +L +++
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 506 KEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSG 562
+ K L P TY L+ G F A + LM G P I + K
Sbjct: 455 ERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 563 DDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
++A ++ K P+ +Y + + + K + +EA L K
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 156/387 (40%), Gaps = 40/387 (10%)
Query: 206 VCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHD 265
V IVR + ER + L + +SE V VL + + +L FF W +
Sbjct: 54 VVNIVRREI---HPERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPT 110
Query: 266 GCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE 325
Y +A+ + + WK++ M+ ++ ET ++ ++ K + AVEL+
Sbjct: 111 SMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFN 170
Query: 326 FAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRV------VKVFSGSGNAI-------- 371
+ K + C++ +D+++ + VK+F G+ I
Sbjct: 171 G----------------VPKTLGCQQ-TVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213
Query: 372 -PNSMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
P+ A+L S G++ E + L EM G+ A + + L G E A E
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
V+++ G D + ++ L+ +G ++ ++ + K + +LI +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ + +A+++L V++ KP Y ++ + G F DA + F MK PP
Sbjct: 334 KIGKIDEAFRLLNNCVEDGH-KPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNR 392
Query: 550 DPFIRHISKRGSGD---DAVQFLSAMT 573
+ I+ G G DA +L MT
Sbjct: 393 PVYTMLITMCGRGGKFVDAANYLVEMT 419
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 158/373 (42%), Gaps = 60/373 (16%)
Query: 200 EKDCARVCRIVRNNVWGDDV----EREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRW 255
E D + V + + V GDDV E ++ L+ F E+V+ VL+ P A+ FF W
Sbjct: 119 EVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNW 178
Query: 256 VEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRR 315
V++ H YN M + G +D +LV +M G + +I T+ ++ + K +
Sbjct: 179 VKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAK 238
Query: 316 MIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSM 375
I + ++E SG + +
Sbjct: 239 KIGKGLLVFE-------------------------------------KMRKSGFELDATA 261
Query: 376 VDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIE 435
+ +++SL GR + KEM + G + L + + E+ V+ ++
Sbjct: 262 YNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKML---LDCIAKSEK----VDVVQ 314
Query: 436 AAGSD-------SDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSY 488
+ D S+ + + L+ CV+G + +AL+ +E+ KE A F+ L+
Sbjct: 315 SIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGL 374
Query: 489 CNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPF 548
C NR +DA +I+ +++K ++L + Y +++S L Q + AL F ++K G PP
Sbjct: 375 CRANRMVDALEIV-DIMKRRKLDD-SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPR 432
Query: 549 IDPF---IRHISK 558
+ + ++H+ K
Sbjct: 433 VSTYTEIMQHLFK 445
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 173/414 (41%), Gaps = 18/414 (4%)
Query: 202 DCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGL 261
D +CR++ ++ + + ++ V F+ E+V VL + + L FF WV +
Sbjct: 614 DVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNG 673
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
KH+ YN +V G + L +MR G + +T+ ++ ++ + + A+
Sbjct: 674 YKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAI 733
Query: 322 ELY-EFAMAGADKPTPQCCTFLLKKVVTC--KELDMDLFSRVVKVFSGSGNAIPNSMVDA 378
+ E G P TF V C K +++ +R + SG +V
Sbjct: 734 RTFKEMKDMGL---IPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 379 VLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAG 438
L L VG + L + G+ + + I L +G+ E+A + E
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIR-ALCRIGKLEEALSELASFEGER 849
Query: 439 SDSDQEIWDSLVVGHCVAGNLDKALD---SFKEMVKKEGISYAGAFDSLISSYCNMNRAI 495
S DQ + S+V G G+L KALD S KE+ K G+ + SLI Y + +
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH---VYTSLI-VYFFKEKQL 905
Query: 496 DAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPF 552
+ C+ ++ + +P TY ++ ++ G +A N F M+ G P F
Sbjct: 906 EKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 553 IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
I + + +DA++ LS M K PST + +F ++ + + A+ L K
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 171/431 (39%), Gaps = 47/431 (10%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRW-VEESGLCKHDGCTYNAMARVIG 277
+++ + L +G S ++V VL + FF W V E G+ K G +Y+ + R +G
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVG-SYSVILRALG 162
Query: 278 REDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQ 337
R ++ M G ++E + F + ++ A+EL+E + + K + +
Sbjct: 163 RRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 338 CCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIP--NSMVDAVLKSLTSVGRIGEWNKV 395
LL+ C+ + S VF+ IP + + ++ + +G + E KV
Sbjct: 223 SFNALLR--CLCERSHV---SAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKV 277
Query: 396 LKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCV 455
LKEM + G+ S + LG G + E + I+ G+ D ++++++
Sbjct: 278 LKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFIS 337
Query: 456 AGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKEL----- 510
A + D+++ ++ M+ +E + L+S + DA +I E++ L
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 511 -----------KPRH------------------DTYKLLVSKLLAQGGFTDALNVFGLMK 541
P H YKLL+ +L G LNV+ M+
Sbjct: 398 VTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQ 457
Query: 542 THGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPE 597
G+P ++ + + + G ++AV + K F P+ VY R+ + E
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Query: 598 EAQNFLSKCPR 608
A K +
Sbjct: 518 LAYKLFLKIKK 528
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 178/478 (37%), Gaps = 81/478 (16%)
Query: 72 LFSKPAADPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEMLSSK 131
+F + S ++ L S + ++ D V L + S E FF W +
Sbjct: 93 VFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVG 152
Query: 132 SYNAMLRALGANGLVDEFWEMVSVMKRKGYG-------------VSRGVKERALECFEK- 177
SY+ +LRALG L +++ M +G V RA+E FE+
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 178 ------------NGL------EGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGD-- 217
N L V K++F+ N C+ I + G+
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVE 272
Query: 218 DVEREIKDL-NVGFSSEVVKL--VLESLG--SEPSKALIFFRWVEESGLCKHDGCTYNAM 272
++E+ +K++ GF + + ++E LG + ++ F ++ G D YNAM
Sbjct: 273 EMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP-DANVYNAM 331
Query: 273 ARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGAD 332
D + M E +ET+ K++ K R + DA+E++E ++
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 333 KPTPQCCTFLLKKVVTCK--ELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIG 390
PT T LK + + M ++ + K +G I S +LK L+ G+ G
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK----AGCRISESAYKLLLKRLSRFGKCG 447
Query: 391 EWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLV 450
V EM++ GY SD E+++ +V
Sbjct: 448 MLLNVWDEMQESGY-----------------------------------PSDVEVYEYIV 472
Query: 451 VGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEK 508
G C+ G+L+ A+ +E ++K + L S N+ AYK+ ++ K +
Sbjct: 473 DGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKAR 530
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 50/374 (13%)
Query: 189 ALFDKNNCNS--VEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEP 246
AL + CNS + ++ + V R R WG E +++L + + VL+ + ++
Sbjct: 289 ALTSRQYCNSGHIVENVSSVLRRFR---WGPAAEEALQNLGLRIDAYQANQVLKQM-NDY 344
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
AL FF W++ KHDG TY M +GR KL+ +M G + T+ +
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKP--TPQCCTFLLKKVVTCKELDMDLFSRVVKVF 364
++ + + + +A+ ++ KP C + ++ MD++ R+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM---- 460
Query: 365 SGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCG--------------YVASAN 409
+G P++ ++ L G + +K+ EM D G + + N
Sbjct: 461 -QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 WQSEIAFR---------------------LGAVGEKEQANEFVNRIEAAGSDSDQEIWDS 448
+Q+ + LG G E+A ++ D+ ++
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 449 LVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEK 508
LV AGN++KA ++ M+ +SL+S++ +N+ +AY++L ++
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 509 ELKPRHDTYKLLVS 522
L+P TY LL+S
Sbjct: 640 -LRPSLQTYTLLLS 652
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 50/374 (13%)
Query: 189 ALFDKNNCNS--VEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEP 246
AL + CNS + ++ + V R R WG E +++L + + VL+ + ++
Sbjct: 289 ALTSRQYCNSGHIVENVSSVLRRFR---WGPAAEEALQNLGLRIDAYQANQVLKQM-NDY 344
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
AL FF W++ KHDG TY M +GR KL+ +M G + T+ +
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKP--TPQCCTFLLKKVVTCKELDMDLFSRVVKVF 364
++ + + + +A+ ++ KP C + ++ MD++ R+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--- 461
Query: 365 SGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCG--------------YVASAN 409
+G P++ ++ L G + +K+ EM D G + + N
Sbjct: 462 --AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 WQSEIAFR---------------------LGAVGEKEQANEFVNRIEAAGSDSDQEIWDS 448
+Q+ + LG G E+A ++ D+ ++
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 449 LVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEK 508
LV AGN++KA ++ M+ +SL+S++ +N+ +AY++L ++
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 509 ELKPRHDTYKLLVS 522
L+P TY LL+S
Sbjct: 640 -LRPSLQTYTLLLS 652
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 153/374 (40%), Gaps = 50/374 (13%)
Query: 189 ALFDKNNCNS--VEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEP 246
AL + CNS + ++ + V R R WG E +++L + + VL+ + ++
Sbjct: 289 ALTSRQYCNSGHIVENVSSVLRRFR---WGPAAEEALQNLGLRIDAYQANQVLKQM-NDY 344
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
AL FF W++ KHDG TY M +GR KL+ +M G + T+ +
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKP--TPQCCTFLLKKVVTCKELDMDLFSRVVKVF 364
++ + + + +A+ ++ KP C + ++ MD++ R+
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ--- 461
Query: 365 SGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCG--------------YVASAN 409
+G P++ ++ L G + +K+ EM D G + + N
Sbjct: 462 --AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 410 WQSEIAFR---------------------LGAVGEKEQANEFVNRIEAAGSDSDQEIWDS 448
+Q+ + LG G E+A ++ D+ ++
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 449 LVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEK 508
LV AGN++KA ++ M+ +SL+S++ +N+ +AY++L ++
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 509 ELKPRHDTYKLLVS 522
L+P TY LL+S
Sbjct: 640 -LRPSLQTYTLLLS 652
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 199/511 (38%), Gaps = 88/511 (17%)
Query: 176 EKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVV 235
+KN + L+ F + + EK +CR++ N W ++ I+DL + +V
Sbjct: 61 KKNLTSTETRPLRERFQRGKRQNHEKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLV 120
Query: 236 KLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVI------------------- 276
VL + AL FFRW E SGL +HD T+ M +++
Sbjct: 121 YNVLHG-AKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 277 ----------------GREDTIDRFWKLVGDMRGAGFEMEIETF---VKVL---GRF--C 312
G+ + K+ M+ G E I+++ KV+ GR+
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 313 KR---RMIKDAVE----LYEFAMAG--------------ADKPT----PQCCTFLLKKVV 347
KR +M+ + VE Y + G D T P TF
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 348 TCKELDMDLFSRVVKVF-SGSGNAIPNSMVD--AVLKSLTSVGRIGEWNKVLKEMEDCGY 404
C+ MD K+F GN I S+V ++K +V R+ + ++ +EM G
Sbjct: 300 FCRFKKMD---EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Query: 405 VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAG-SDSDQEIWDSLVVGHCVAGNLDKAL 463
+A S + L G+ +A + + A + D I+ L+V AG++ A
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 416
Query: 464 DSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRH-DT------ 516
+ K M + AG + LI + C + A K+L L+ EKE+ RH DT
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLI-EKEIILRHQDTLEMEPS 475
Query: 517 -YKLLVSKLLAQGGFTDALNVFGLMKTHGF--PPFIDPFIRHISKRGSGDDAVQFLSAMT 573
Y ++ L G A +F + G ++ IR +K G+ D + + L M+
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMS 535
Query: 574 YKKFPSTS-VYLRMFEAFFKKRRPEEAQNFL 603
+ P S Y + +++ K P +A+ L
Sbjct: 536 RRGVPRESNAYELLIKSYMSKGEPGDAKTAL 566
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 134/340 (39%), Gaps = 42/340 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H TYN + R I L+G M G+E I T +L +C + I DAV L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + +P T L+ G + N +AV
Sbjct: 178 VDQMVEMGYRPDTITFTTLIH-----------------------GLFLHNKASEAVALVD 214
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
V R + N V G V + L G+ + A +N++EAA ++D
Sbjct: 215 RMVQRGCQPNLVTY-----GVVVNG---------LCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+++++ C ++D AL+ FKEM K + SLIS C+ R DA ++L +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRG 560
++ EK++ P T+ L+ + +G F +A ++ M P I + +
Sbjct: 321 MI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 561 SGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D A Q M K FP Y + + F K +R E+
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 147/385 (38%), Gaps = 46/385 (11%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
VE + + F++ + L L + SE + AL+ R V+ C+ + TY + + +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASE-AVALVD-RMVQRG--CQPNLVTYGVVVNGLCK 237
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQC 338
D L+ M A E ++ F ++ CK R + DA+ L++ +P
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN--- 294
Query: 339 CTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKE 398
VVT L + L S GR + +++L +
Sbjct: 295 -------VVTYSSL---------------------------ISCLCSYGRWSDASQLLSD 320
Query: 399 MEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGN 458
M + + + + G+ +A + + + D D ++SLV G C+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 459 LDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYK 518
LDKA F+ MV K+ +++LI +C R D ++ E+ + L TY
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYT 439
Query: 519 LLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYK 575
L+ L G +A VF M + G PP I + + + G + A++ M
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 576 KFP-STSVYLRMFEAFFKKRRPEEA 599
+ +Y M E K + ++
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDG 524
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 134/340 (39%), Gaps = 42/340 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+ TYN + R I L+G M G+E I T +L +C + I DAV L
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + +P T L+ G + N +AV
Sbjct: 103 VDQMVEMGYRPDTITFTTLIH-----------------------GLFLHNKASEAVALVD 139
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
V R + N V G V + L G+ + A +N++EAA ++D
Sbjct: 140 RMVQRGCQPNLVTY-----GVVVNG---------LCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+++++ C ++D AL+ FKEM K + SLIS C+ R DA ++L +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRG 560
++ EK++ P T+ L+ + +G F +A + M P I + I
Sbjct: 246 MI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD 304
Query: 561 SGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D A Q M K FP Y + + F K +R E+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 152/389 (39%), Gaps = 54/389 (13%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
VE + + F++ + L L + SE + AL+ R V+ C+ + TY + + +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASE-AVALVD-RMVQRG--CQPNLVTYGVVVNGLCK 162
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQC 338
ID + L+ M A E ++ F ++ CK R + DA+ L++ +P
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN--- 219
Query: 339 CTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKE 398
VVT L + L S GR + +++L +
Sbjct: 220 -------VVTYSSL---------------------------ISCLCSYGRWSDASQLLSD 245
Query: 399 MEDCGY---VASANWQSEIAFRLGAVGEKEQA-NEFVNRIEAAGSDSDQEIWDSLVVGHC 454
M + + + N + + G E E+ ++ + R D D ++SL+ G C
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR----SIDPDIFTYNSLINGFC 301
Query: 455 VAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRH 514
+ LDKA F+ MV K+ +++LI +C R D ++ E+ + L
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDT 360
Query: 515 DTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSA 571
TY L+ L G +A VF M + G PP I + + + G + A++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 572 MTYKKFP-STSVYLRMFEAFFKKRRPEEA 599
M + +Y M E K + ++
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 124/289 (42%), Gaps = 9/289 (3%)
Query: 267 CTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEF 326
CT N + + R +G M GFE ++ TF +L +C I+DA+ L++
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 327 AMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMV-DAVLKSL 383
+ KP T L++ + + L+ ++LF+++ G+ + PN + +A++ L
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM-----GTNGSRPNVVTYNALVTGL 233
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
+GR G+ +L++M + + + VG+ +A E N + D
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
+ SL+ G C+ G LD+A F M + + +LI +C R D KI E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF 552
+ +K + TY +L+ G A VF M + PP I +
Sbjct: 354 M-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 11/284 (3%)
Query: 268 TYNAMAR---VIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
TYNA+ IGR D W L+ DM E + TF ++ F K + +A ELY
Sbjct: 225 TYNALVTGLCEIGRWG--DAAW-LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSL 383
+ + P L+ + LD +R + PN ++ ++
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDE---ARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
R+ + K+ EM G VA+ + + VG + A E N++ + + D
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
++ L+ G C G ++KAL F+ M K+E + +I C + + DA+ + C
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
L K +KP TY ++S +G +A ++F MK GF P
Sbjct: 459 LF-SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 112/532 (21%), Positives = 209/532 (39%), Gaps = 43/532 (8%)
Query: 100 IAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRK 159
+ +LL+L + + F W + S Y ++ LGANG ++ MK +
Sbjct: 81 LYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDE 140
Query: 160 GYGVSRGVKERALECFEKNGLEGDVVRLKALFDKNNCNSVEKD-----------CARVCR 208
G + + ++K G G RL + + N S E + C
Sbjct: 141 GIVFKESLFISIMRDYDKAGFPGQTTRL--MLEMRNVYSCEPTFKSYNVVLEILVSGNCH 198
Query: 209 IVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCT 268
V NV+ D + R+I F+ VV ++ +E AL R + + G C +
Sbjct: 199 KVAANVFYDMLSRKIPP--TLFTFGVVMKAFCAV-NEIDSALSLLRDMTKHG-CVPNSVI 254
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAM 328
Y + + + + ++ +L+ +M G + ETF V+ CK I +A ++ +
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 329 AGADKPTPQCCTFLLKKVVTCKELDM--DLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTS 385
P +L+ + +D DLF R+ K P ++ + ++ +
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---------PEIVIFNTLIHGFVT 365
Query: 386 VGRIGEWNKVLKEM-EDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
GR+ + VL +M G V + + + G A E ++ + G +
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
+ LV G C G +D+A + EM F+ LIS++C +R +A +I E+
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 505 VKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG-------FPPFIDPFIRHIS 557
+ K KP T+ L+S L AL + M + G + I+ F+R
Sbjct: 486 PR-KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR--- 541
Query: 558 KRGSGDDAVQFLSAMTYKKFPSTSV-YLRMFEAFFKKRRPEEAQNFLSKCPR 608
RG +A + ++ M ++ P + Y + + + ++A++ K R
Sbjct: 542 -RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 3/283 (1%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
D CTYN++ +E + +++ DMR G + + ++ ++ FCK I +A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLT 384
A KP L+ CKE + + + G ++++ L
Sbjct: 448 NEMSADGLKPNTVGFNCLISAF--CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
V I +L++M G VA+ + + GE ++A + VN + GS D+
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
++SL+ G C AG +DKA F++M++ + + LI+ C +A + E+
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 505 VKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
V P T+ L++ L G D L +F ++ G PP
Sbjct: 626 VLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP 667
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 146/350 (41%), Gaps = 35/350 (10%)
Query: 206 VCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHD 265
V I+R WG E + + + VL+ + + + AL FF W++ KHD
Sbjct: 300 VSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNY-ANALGFFYWLKRQPGFKHD 358
Query: 266 GCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY- 324
G TY M +GR KL+ +M G + T+ +++ + + +K+A+ ++
Sbjct: 359 GHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFN 418
Query: 325 EFAMAGADKPTPQCCTFL-LKKVVTCKELDMDLFSR---------------VVKVFSGSG 368
+ AG + CT + + ++ MD++ R ++ +G
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 369 N---------------AIPNSMVDAVLKSLTSVGRIGEWN-KVLKEMEDCGYVASANWQS 412
+ PN + ++ +L + R E K+ ++M++ G+ S
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYS 538
Query: 413 EIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKK 472
+ LG G E+A ++ D+ ++ LV AGN+DKA ++ M++
Sbjct: 539 IVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQA 598
Query: 473 EGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVS 522
+SL+S++ ++R +AY +L ++ L P TY LL+S
Sbjct: 599 GLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG-LHPSLQTYTLLLS 647
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 141/330 (42%), Gaps = 16/330 (4%)
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADK--PTP 336
+ +D F ++V + R + +++F VL + +E Y++ + +P
Sbjct: 129 DKAVDLFHRMVDEFR---CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 337 QCCTFLLKKVVTCKELDMDLFSRVVKVFSG--SGNAIPNSMVDAVL-KSLTSVGRIGEWN 393
+F L CK + R ++VF G +P+ L L RI E
Sbjct: 186 NGLSFNLVIKALCK---LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 394 KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGH 453
+L EM+ G S + + L G+ + + V+ + G ++ +++L+ G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 454 CVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPR 513
C+ G LDKA+ + MV + I + +LI+ RA DA ++L + +E+
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM-EERGYHLN 361
Query: 514 HDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLS 570
Y +L+S L +G +A++++ M G P I + + + + G ++A + L+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 571 AMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
M P+ Y + + FFK EEA
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 245 EPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETF 304
+ + A+ R +EE + K D Y+ + + ++ ++D + L +M GF+ +I T+
Sbjct: 243 QTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 305 VKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVF 364
++G FC D +L + K +P TF
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIK--RKISPNVVTF----------------------- 336
Query: 365 SGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEK 424
+ ++D+ +K G++ E +++LKEM G + + +
Sbjct: 337 --------SVLIDSFVKE----GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 425 EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
E+A + V+ + + G D D ++ L+ G+C A +D L+ F+EM + I+ +++L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFG 538
+ +C + A K+ E+V + ++P +YK+L+ L G AL +FG
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMV-SRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 148/364 (40%), Gaps = 14/364 (3%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
L + +E G+ H T + M R + + +G + G+E + F +L
Sbjct: 107 VLALCKQMESKGI-AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL 165
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSG 366
C + +A+EL + + KPT L+ + ++ + L R+V+
Sbjct: 166 NGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--- 222
Query: 367 SGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKE 425
PN + VL + G+ ++L++ME+ A S I L G +
Sbjct: 223 --GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 426 QANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLI 485
A N +E G +D +++L+ G C AG D ++M+K++ F LI
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 486 SSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
S+ + +A ++L E++ ++ + P TY L+ + +A+ + LM + G
Sbjct: 341 DSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 546 PPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKFPSTSV-YLRMFEAFFKKRRPEEAQN 601
P I F I K DD ++ M+ + + +V Y + + F + + E A+
Sbjct: 400 DPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKK 459
Query: 602 FLSK 605
+
Sbjct: 460 LFQE 463
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 135/337 (40%), Gaps = 11/337 (3%)
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAM 328
+N + I + + L M G I T ++ FC+ R + A M
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIM 150
Query: 329 AGADKPTPQCCTFLLKKV-VTCKELD-MDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSV 386
+P LL + + C+ + ++L R+V++ N++V+ + +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLN---- 206
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
G++ + ++ M + G+ + + + G+ A E + ++E D +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
++ G C G+LD A + F EM K + +++LI +CN R D K+L +++K
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGD 563
K + P T+ +L+ + +G +A + M G P + I K +
Sbjct: 327 RK-ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 564 DAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
+A+Q + M K P + + + K R ++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 131/316 (41%), Gaps = 17/316 (5%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
T++ + +E + +L+ +M G T+ ++ FCK +++A+++ +
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTS 385
++ P L+ +D ++LF + + N++V +S
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS--- 451
Query: 386 VGRIGEWNKVLKEMEDCGYVASANWQSEIAFR-----LGAVGEKEQANEFVNRIEAAGSD 440
G++ K+ +EM V+ ++++ L GE E+A E +IE + +
Sbjct: 452 -GKLEVAKKLFQEM-----VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 441 SDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKI 500
D I+ ++ G C A +D A D F + K A A++ +IS C + ++ I
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD-SLSKADI 564
Query: 501 LCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRG 560
L + E+ P TY +L+ L T A + MK+ GFP + I+
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Query: 561 SGDDAVQFLSAMTYKK 576
SG+ FL ++ +
Sbjct: 625 SGELDKSFLDMLSTTR 640
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 154/379 (40%), Gaps = 11/379 (2%)
Query: 228 VGFSSEVVKLVLES--LGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRF 285
+ S V VL+S + +P A FF W + H+ Y ++ V+ +DR
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 286 WKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKK 345
+ +++ F M + ++ F K M+++ + ++ +PT FL+
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 346 VVTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGY 404
+V+ + +D RV +V SG P+ + + ++K G+ + + L++ME G+
Sbjct: 232 LVSA--MFVDSAERVFEVME-SGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH 288
Query: 405 VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALD 464
A + A + ++ G + ++ G C G L++
Sbjct: 289 EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYT 348
Query: 465 SFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKL 524
F+ M++K + LI Y DA ++L ++ E KP TY ++V+ L
Sbjct: 349 VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG-FKPDVVTYSVVVNGL 407
Query: 525 LAQGGFTDALNVFGLMKTHGFP---PFIDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTS 581
G +AL+ F + G F I + K G D+A + M+ K S
Sbjct: 408 CKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 467
Query: 582 -VYLRMFEAFFKKRRPEEA 599
Y + +AF K R+ +EA
Sbjct: 468 YCYNALIDAFTKHRKVDEA 486
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 125/296 (42%), Gaps = 10/296 (3%)
Query: 256 VEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRR 315
V ESG K D TYN M + + + + + DM G E + T++ ++
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 316 MIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMD----LFSRVVKVFSGSGNAI 371
V LY+ + P + ++ + CKE ++ +F +++ S AI
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGL--CKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 372 PNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFV 431
++D KS G + + ++L M D G+ S + L G E+A ++
Sbjct: 365 YTVLIDGYAKS----GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 432 NRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNM 491
+ G + + SL+ G AG +D+A F+EM +K + +++LI ++
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 492 NRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+ +A + + +E+ TY +L+S + + +AL ++ +M G P
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITP 536
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 151/359 (42%), Gaps = 12/359 (3%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
++L F++++ CK + Y M ++GRE +D+ ++ +M G + ++ +
Sbjct: 123 RSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTAL 182
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG- 366
+ + + + ++EL + +K +P T+ + C +D + ++ +F+
Sbjct: 183 INAYGRNGRYETSLELLD--RMKNEKISPSILTY-NTVINACARGGLD-WEGLLGLFAEM 238
Query: 367 -SGNAIPNSMVDAVLKSLTSVGRIG-EWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEK 424
P+ + L S ++ +G E V + M D G V S + G +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 425 EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
E+ + + + + GS D ++ L+ + +G++ +A+ F +M A + L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
++ + R D ++ E+ K P TY +L+ G F + + +F M
Sbjct: 359 LNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN 417
Query: 545 FPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
P ++ + I K G +DA + L MT PS+ Y + EAF + EEA
Sbjct: 418 IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 15/315 (4%)
Query: 231 SSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVG 290
S EVV+ VL + FF+W E+ +H Y+ M + W L+
Sbjct: 99 SQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLIN 158
Query: 291 DMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEF-AMAGADKPTPQCCTFLLKKVVTC 349
MR + +ETF V+ ++ + + + +A+ Y F M D P P F C
Sbjct: 159 AMRKKKM-LNVETFCIVMRKYARAQKVDEAI--YAFNVMEKYDLP-PNLVAFNGLLSALC 214
Query: 350 KELDMDLFSRVVKVFSGSGNAI-PNSMVDAVLKSLTSVGR---IGEWNKVLKEMEDCGYV 405
K ++ + +VF + P+S ++L L G+ + + +V +EM D G
Sbjct: 215 KSKNV---RKAQEVFENMRDRFTPDSKTYSIL--LEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 406 ASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDS 465
S + L G ++A V ++ + I+ LV + L++A+D+
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 466 FKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLL 525
F EM + + F+SLI ++C NR + Y++L E+ K K + P + +++ L+
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM-KSKGVTPNSKSCNIILRHLI 388
Query: 526 AQGGFTDALNVFGLM 540
+G +A +VF M
Sbjct: 389 ERGEKDEAFDVFRKM 403
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 150/412 (36%), Gaps = 51/412 (12%)
Query: 238 VLESLGSEPSKALIFFRWVEESGL-CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAG 296
+L ++ ++ + W + L H+ CT N + R + +G M G
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLG 146
Query: 297 FEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--M 354
E I TF +L FC+ + DA+ +++ + KP ++ + K++D +
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 355 DLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEM---EDCGYVASANWQ 411
DL +R+ K G NS++ L S GR + +++ M E V + N
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISG----LCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 412 SEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVK 471
+ + G V E E EF + D D + L+ G C+ LD+A + F MV
Sbjct: 263 IDACVKEGRVSEAE---EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 472 KEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELK-------------------- 511
K + LI+ YC + K+ CE+ + ++
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 512 --------------PRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IR 554
P TY +L+ L G AL + M+ +G I + IR
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIR 439
Query: 555 HISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
+ K G DA ++ + P Y M +KK EA K
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 132/340 (38%), Gaps = 42/340 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+ TYN + R I L+G M G+E I T +L +C + I DAV L
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + +P D F+ ++ G + N +AV
Sbjct: 178 VDQMVEMGYRP------------------DTITFTTLIH-----GLFLHNKASEAVALVD 214
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
V R + N V G V + L G+ + A +N++EAA +++
Sbjct: 215 RMVQRGCQPNLVTY-----GVVVNG---------LCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+ +++ C + D AL+ F EM K + SLIS CN R DA ++L +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRG 560
++ E+++ P T+ L+ + +G +A ++ M P I I
Sbjct: 321 MI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 561 SGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D+A M K FP+ Y + F K +R +E
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 159/403 (39%), Gaps = 35/403 (8%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
VE + + F++ + L L + SE + AL+ R V+ C+ + TY + + +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASE-AVALVD-RMVQRG--CQPNLVTYGVVVNGLCK 237
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY-EFAMAGADKPTPQ 337
ID + L+ M A E + + V+ CK R DA+ L+ E G P
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV---RPN 294
Query: 338 CCTFLLKKVVTC----------KELDMDLFSRVVKVFSGSGNAIP-NSMVDAVLKSLTSV 386
T+ +++C L D+ R + + N + N+++DA +K
Sbjct: 295 VITY--SSLISCLCNYERWSDASRLLSDMIERKI-----NPNVVTFNALIDAFVKE---- 343
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
G++ E K+ EM S + ++A + + + +
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
++L+ G C A +D+ ++ F+EM ++ + + +LI + +A + ++V
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGD 563
+ + P TY L+ L G A+ VF ++ P I + I + K G +
Sbjct: 464 DG-VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 564 DAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
D +++ K P +Y M F +K EEA K
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 172/431 (39%), Gaps = 27/431 (6%)
Query: 187 LKALFDKNNCNSVE--------KDCARVCRIVRN--NVWGDDVEREIKDLNVGFSSEVVK 236
+K LF K+ C S D A + +++ + N D + + ++ +V
Sbjct: 1 MKRLFSKSLCTSAAGANLKPPPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPNLVN 60
Query: 237 LVLESLGSEPSKALIFFRWVEESGL-CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGA 295
VL+ L + KAL FF +++ HD +++ + R W L+ MR
Sbjct: 61 SVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSL 120
Query: 296 GFEMEIETFVKVLGRFCKRRMIKDAVELY-EFAMAGADKPTPQCCTFLLKKVVTCKELDM 354
+TF V R+ AV+L+ G + T L V CK +
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTIL---DVLCKSKRV 177
Query: 355 DLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGY---VASANWQ 411
+ + + G ++ + +L + R + +VLKEM + G + + N
Sbjct: 178 EKAYELFRALRGRF-SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 412 SEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVK 471
+ FR G + A EF ++ + D + ++V G VAG + +A + F EM++
Sbjct: 237 LKGFFRAGQI---RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 472 KEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFT 531
+ + ++++I C + +A + E+V+ + +P TY +L+ L G F+
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 532 DALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKK-FPSTSVYLRMF 587
+ M+ G P + IR+ S+ + A+ M P+ Y +
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 588 EAFFKKRRPEE 598
F ++R E+
Sbjct: 413 SGMFVRKRSED 423
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 146/339 (43%), Gaps = 8/339 (2%)
Query: 211 RNNVWGDDVEREIKDLNVGFSSEVVKL--VLESL--GSEPSKALIFFRWVEESGLCKHDG 266
R N D V K + +G+ ++V +++SL + A FF+ +E G+ + +
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-RPNV 225
Query: 267 CTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEF 326
TY A+ + +L+ DM + T+ +L F K + +A EL+E
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 327 AMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSV 386
+ + P + L+ + C +D +++ + G + ++
Sbjct: 286 MVRMSIDPDIVTYSSLINGL--CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
R+ + K+ +EM G V++ + + G+ ++A EF ++++ G D +
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
+ L+ G C G L+KAL F++M K+E + ++I C + +A+ + C L
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-S 462
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
K LKP TY ++S L +G + ++ MK G
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 9/265 (3%)
Query: 288 LVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVV 347
++G M G+E + T ++ FC+R + DAV L + + KP ++ +
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 348 TCKELD--MDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGY 404
K ++ D F + + PN + A++ L + R + ++L +M
Sbjct: 202 KTKRVNDAFDFFKEIER-----KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 405 VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALD 464
+ S + G+ +A E + D D + SL+ G C+ +D+A
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 465 SFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKL 524
F MV K ++ ++++LI+ +C R D K+ E+ ++ L TY L+
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGF 375
Query: 525 LAQGGFTDALNVFGLMKTHGFPPFI 549
G A F M G P I
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDI 400
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 150/362 (41%), Gaps = 21/362 (5%)
Query: 231 SSEVVKLVLE--SLGSEPSKALIFFR-WVEESGLCKHDGCTYNAMARVIGREDTIDRFWK 287
+SE+++L L + + + L FR ++ C ++ + + ID
Sbjct: 124 ASEIIRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVM 183
Query: 288 LVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGAD-----------KPTP 336
++ +R G +I T ++ +RR + ++Y D K P
Sbjct: 184 VMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKP 243
Query: 337 QCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSM-VDAVLKSLTSVGRIGEWNKV 395
TF V +E + ++ R+ + PN + ++++ + G + E KV
Sbjct: 244 NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKV 303
Query: 396 LKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCV 455
+EM+ G V + + L + E +A E + G + ++ LV G+C
Sbjct: 304 WEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCK 363
Query: 456 AGNLDKALDSFKEMVKKEGISYAG-AFDSLISSYCN---MNRAIDAYKILCELVKEKELK 511
AG++D L ++EM K++G G ++L+ C+ R ++A I+ + V+E
Sbjct: 364 AGDVDSGLVVYREM-KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 512 PRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRG-SGDDAVQFLS 570
P + Y+LLV +L G ALN+ M GF P + + I G GD+ L
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALL 482
Query: 571 AM 572
A+
Sbjct: 483 AI 484
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 133/340 (39%), Gaps = 42/340 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+ TY+ + R + ++G M G+E I T +L +C + I +AV L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ +P VT L LF N +M A++ +
Sbjct: 174 VDQMFVTGYQPN----------TVTFNTLIHGLFLH---------NKASEAM--ALIDRM 212
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
+ G ++ G V + L G+ + A +N++E +
Sbjct: 213 VAKG-------CQPDLVTYGVVVNG---------LCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+++++ G C ++D AL+ FKEM K + SLIS CN R DA ++L +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRG 560
++ E+++ P T+ L+ + +G +A ++ M P I + I
Sbjct: 317 MI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 561 SGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D+A Q M K FP Y + + F K +R EE
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 128/300 (42%), Gaps = 6/300 (2%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
AL F+ +E G+ + + TY+++ + +L+ DM ++ TF ++
Sbjct: 275 ALNLFKEMETKGI-RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
F K + +A +LY+ + + P+ + L+ LD ++ + F S
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE---AKQMFEFMVSK 390
Query: 369 NAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
+ P+ + + ++K R+ E +V +EM G V + + + L G+ + A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
E + + G + +++L+ G C G L+KA+ F+ + + + ++ +I
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
C + D + + C L K +KP Y ++S +G +A +F MK G P
Sbjct: 511 MCKAGKVEDGWDLFCNL-SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 155/414 (37%), Gaps = 51/414 (12%)
Query: 227 NVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFW 286
V F++ + L L + SE + ALI R V + C+ D TY + + + D +
Sbjct: 186 TVTFNTLIHGLFLHNKASE-AMALID-RMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 287 KLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKV 346
L+ M E + + ++ CK + + DA+ L++ +P V
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN----------V 291
Query: 347 VTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVA 406
VT L + L + GR + +++L +M +
Sbjct: 292 VTYSSL---------------------------ISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 407 SANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSF 466
S + G+ +A + + + D + SL+ G C+ LD+A F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 467 KEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLA 526
+ MV K +++LI +C R + ++ E+ ++ L TY +L+ L
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQ 443
Query: 527 QGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSV 582
G A +F M + G PP I + + + K G + A+ + K P+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 583 YLRMFEAFFKKRRPEEAQNF-----LSKCPRYIRNHADVLNLFCSMNSKEASSS 631
Y M E K + E+ + L + + +++ FC SKE + +
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 129/344 (37%), Gaps = 42/344 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
HD TY+ R + ++ M G+E +I T +L +C + I DAV L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + KP TF ++ G + N +AV
Sbjct: 176 VDQMVEMGYKPD----TFTFTTLI-------------------HGLFLHNKASEAV---- 208
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
++ +M G + L G+ + A + ++E ++D
Sbjct: 209 ----------ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+++++ G C ++D AL+ F EM K + SLIS CN R DA ++L +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRG 560
++ E+++ P T+ L+ + +G +A ++ M P I I
Sbjct: 319 MI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 561 SGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEAQNFL 603
D+A M K FP+ Y + + F K +R EE
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/467 (19%), Positives = 166/467 (35%), Gaps = 87/467 (18%)
Query: 177 KNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVK 236
K G E D+V L +L + C+S K + +V V E K F++ +
Sbjct: 146 KLGYEPDIVTLSSLLN-GYCHS--KRISDAVALVDQMV-----EMGYKPDTFTFTTLIHG 197
Query: 237 LVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAG 296
L L + SE A+ + + G C+ D TY + + + ID L+ M
Sbjct: 198 LFLHNKASE---AVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 297 FEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDL 356
E ++ + ++ CK + + DA+ L+ +P F +++C
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD----VFTYSSLISC------- 302
Query: 357 FSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAF 416
L + GR + +++L +M + + S +
Sbjct: 303 --------------------------LCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 417 RLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS 476
G+ +A + + + D D + SL+ G C+ LD+A F+ M+ K+
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 477 YAGAFDSLISSYCNMNRAIDAYKILCELVKE----------------------------- 507
+ +LI +C R + ++ E+ +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 508 KEL-----KPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKR 559
K++ P TY +L+ L G A+ VF ++ P I + I + K
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 516
Query: 560 GSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
G +D + ++ K P+ Y M F +K EEA + L K
Sbjct: 517 GKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 181/482 (37%), Gaps = 75/482 (15%)
Query: 132 SYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALF 191
SY+ ++ G +D+ W+++ VMKRKG + + G ++ L
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLK-------------PNSYIYGSIIGL---- 325
Query: 192 DKNNCNSVEKDCARVCRIVR-NNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKAL 250
R+C++ + + + + I V +++ + SK
Sbjct: 326 -----------LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK-- 372
Query: 251 IFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGR 310
F + S D TY A+ + + KL +M G E + TF +++
Sbjct: 373 --FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 311 FCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNA 370
+CK +KDA ++ + P T L+ + CKE D+D
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL--CKEGDLD--------------- 473
Query: 371 IPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
N++L EM G + + I L G E+A +
Sbjct: 474 --------------------SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCN 490
V EAAG ++D + +L+ +C +G +DKA + KEM+ K F+ L++ +C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 491 MNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP--- 547
D K+L ++ K + P T+ LV + + A ++ M + G P
Sbjct: 574 HGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 548 FIDPFIRHISKRGSGDDAVQFLSAMTYKKFP-STSVYLRMFEAFFKKRRPEEAQNFLSKC 606
+ ++ K + +A M K F S S Y + + F K+++ EA+ +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 607 PR 608
R
Sbjct: 693 RR 694
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 181/482 (37%), Gaps = 75/482 (15%)
Query: 132 SYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALF 191
SY+ ++ G +D+ W+++ VMKRKG + + G ++ L
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLK-------------PNSYIYGSIIGL---- 325
Query: 192 DKNNCNSVEKDCARVCRIVR-NNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKAL 250
R+C++ + + + + I V +++ + SK
Sbjct: 326 -----------LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK-- 372
Query: 251 IFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGR 310
F + S D TY A+ + + KL +M G E + TF +++
Sbjct: 373 --FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 311 FCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNA 370
+CK +KDA ++ + P T L+ + CKE D+D
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL--CKEGDLD--------------- 473
Query: 371 IPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
N++L EM G + + I L G E+A +
Sbjct: 474 --------------------SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCN 490
V EAAG ++D + +L+ +C +G +DKA + KEM+ K F+ L++ +C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 491 MNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP--- 547
D K+L ++ K + P T+ LV + + A ++ M + G P
Sbjct: 574 HGMLEDGEKLLNWML-AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 548 FIDPFIRHISKRGSGDDAVQFLSAMTYKKFP-STSVYLRMFEAFFKKRRPEEAQNFLSKC 606
+ ++ K + +A M K F S S Y + + F K+++ EA+ +
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 607 PR 608
R
Sbjct: 693 RR 694
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 171/423 (40%), Gaps = 88/423 (20%)
Query: 233 EVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDM 292
+V+L+L+ S AL FRW H TY A+ + D ++L+ +M
Sbjct: 45 HIVRLILDQ--KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEM 102
Query: 293 RGA-GFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKE 351
+ G + FV ++ F + R+IK + + + KP+ + +L +V ++
Sbjct: 103 PDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-ED 161
Query: 352 LDM--DLFSR--------------------------------VVKVFSGSGNAIPNSMV- 376
+D+ + F+R ++++ SG A PN++V
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVA-PNAVVY 220
Query: 377 DAVLKSLTSVGRIGEWNKVLKEMEDCGYV-------ASANWQSEI--------AFRLGAV 421
+ +L +L G++G ++ EM++ V A N Q I F LG V
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFV 280
Query: 422 ----------------GEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDS 465
G +A E + R+E+ G D ++LV G+C G + A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 466 FKEMVKKEGISYAGAFDSLISSYCN---MNRAIDAYKILCELVKEKELKPRHDTYKLLVS 522
F EM +K + ++ LI+ YC+ ++ A+D + + K ++ T+ L+
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM----KTDAIRWNFATFNTLIR 396
Query: 523 KLLAQGGFTDALNVFGLMK----THGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYK 575
L G D L + +M+ HG IDP+ I K +DA++FL M K
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHG--ARIDPYNCVIYGFYKENRWEDALEFLLKME-K 453
Query: 576 KFP 578
FP
Sbjct: 454 LFP 456
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 102/518 (19%), Positives = 206/518 (39%), Gaps = 88/518 (16%)
Query: 69 IADLFSKPAADPS--VVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPE 126
+ DL SK PS V S LD V + D ++A+ FF +
Sbjct: 134 VVDLVSKFGIKPSLKVFNSILD---VLVKEDI------------DIAREFFTRKMMASGI 178
Query: 127 MLSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVR 186
+Y +++ L + + ++++ +MK G + V L KNG G
Sbjct: 179 HGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARS 238
Query: 187 LKALFDKNNCNSVEKDCARVC---RIVRNNVWGDDVEREIKDLNVGFSSEVVKL--VLES 241
L + + N + + C +++++ V + K ++GF +VV + V+E
Sbjct: 239 LMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLE------KCFSLGFVPDVVTVTKVMEV 292
Query: 242 LGSEP--SKALIFFRWVEESGLCKHDGCTYNAMAR---VIGREDTIDRFWKLVGDMRGAG 296
L +E S+AL VE G K D N + + +G+ RF+ +M G
Sbjct: 293 LCNEGRVSEALEVLERVESKG-GKVDVVACNTLVKGYCALGKMRVAQRFFI---EMERKG 348
Query: 297 FEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDL 356
+ +ET+ ++ +C M+ A++ + A + +
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIR------------------WNFAT 390
Query: 357 FSRVVKVFSGSGNAIPNSMVDAVLKSLTSV--GRIGEWNKVLKEMEDCGYVASANWQSEI 414
F+ +++ S G + +++ +V RI +N V+ G+ W+ +
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIY-----GFYKENRWEDAL 445
Query: 415 AFRLGAVGEK------EQANEFVNRIEAAGSDSDQEIWD---------SLVVGHCVA--- 456
F L EK +++ + ++ E G D + +D S++V HC+
Sbjct: 446 EFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRY 503
Query: 457 ---GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPR 513
G ++++L+ +MV + + + F+++I +C ++ ++ K + E + E+ P
Sbjct: 504 SQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV-EDMAERGCVPD 562
Query: 514 HDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDP 551
++Y L+ +L +G A +F M P DP
Sbjct: 563 TESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP--DP 598
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 142/348 (40%), Gaps = 11/348 (3%)
Query: 264 HDGCT--YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
H C+ Y + G++ + +VG++R +G +++T+ ++ + + + A
Sbjct: 748 HFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERAR 807
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
++ M PT + LL + C + ++ VV+ G I S + +L
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHAL--CVDGRLEELYVVVEELQDMGFKISKSSILLMLD 865
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
+ G I E K+ M+ GY+ + + L A V+ +E A
Sbjct: 866 AFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKV 925
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYKI 500
+ IW+S++ + + K + ++ +K+ G+ +++LI YC R + Y +
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQR-IKETGLEPDETTYNTLIIMYCRDRRPEEGY-L 983
Query: 501 LCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFP---PFIDPFIRHIS 557
L + ++ L P+ DTYK L+S Q A +F + + G F ++
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Query: 558 KRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLS 604
GS A + L M P+ + + ++ P+EA+ LS
Sbjct: 1044 DSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 146/375 (38%), Gaps = 33/375 (8%)
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKD--AVELYEF 326
YNAM V R + +LV MR G ++ +F ++ K + AVEL +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 327 AMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG--SGNAIPNSMV-DAVLKSL 383
+P LL LD VKVF + P+ +A++
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLD-----GAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
G E ++ E+E G+ A + + + E+ E +++ G D+
Sbjct: 343 GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDE 402
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYKILC 502
+++++ + G LD AL +K+M G + A + LI S NR ++A ++
Sbjct: 403 MTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMS 462
Query: 503 ELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP-------FIDPFIRH 555
E++ + +KP TY L+ G +A + F M G P +D +R
Sbjct: 463 EML-DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 556 ISKRGSGDDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSKCPRYIRNHAD 615
R + + ++ PS ++Y M K+ R ++ Q + IR+ +
Sbjct: 522 NETRKAWG---LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ-------KTIRDMEE 571
Query: 616 VLNLFCSMNSKEASS 630
+ C MN E SS
Sbjct: 572 L----CGMNPLEISS 582
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/352 (20%), Positives = 152/352 (43%), Gaps = 10/352 (2%)
Query: 255 W-VEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCK 313
W ++E GL K D YN M ++ +++ M G + ++ TF ++ C+
Sbjct: 143 WMIDEFGL-KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 314 RRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPN 373
++ A+ + E + P + T +++ + +E D+D R+ + G + N
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI--EEGDLDGALRIREQMVEFGCSWSN 259
Query: 374 SMVDAVLKSLTSVGRIGEWNKVLKEMEDC-GYVASANWQSEIAFRLGAVGEKEQANEFVN 432
V+ ++ GR+ + ++EM + G+ + + L G + A E ++
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 433 RIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMN 492
+ G D D ++S++ G C G + +A++ +M+ ++ +++LIS+ C N
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 493 RAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FI 549
+ +A + L ++ K + P T+ L+ L A+ +F M++ G P
Sbjct: 380 QVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 550 DPFIRHISKRGSGDDAVQFLSAMTYKKFP-STSVYLRMFEAFFKKRRPEEAQ 600
+ I + +G D+A+ L M S Y + + F K + EA+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 182/454 (40%), Gaps = 59/454 (12%)
Query: 227 NVGFSSEVVKLVLESLGSEP--SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDR 284
+ SS VKL L+SL S+P S AL F + + Y + +GR + D
Sbjct: 43 SAALSSTDVKL-LDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDD 101
Query: 285 FWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAG-ADKPTPQCCTFLL 343
K++ DM+ + EM TF+ ++ + + + + + + ++ + KP +L
Sbjct: 102 MKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRML 161
Query: 344 KKVVTCKEL-----------------DMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSV 386
+V L D+ F+ ++K + P + +L+ + S
Sbjct: 162 NLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL---MLEDMPSY 218
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAV---------------------GEKE 425
G + + M+ GY+ + + R V G E
Sbjct: 219 GLVPDEKTFTTVMQ--GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 426 QANEFVNRIEAA-GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
A F+ + G DQ +++LV G C AG++ A++ M+++ ++S+
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
IS C + +A ++L +++ ++ P TY L+S L + +A + ++ + G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMIT-RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 545 FPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQ 600
P + F I+ + + A++ M K P Y + ++ K + +EA
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 601 NF-----LSKCPRYIRNHADVLNLFCSMN-SKEA 628
N LS C R + + +++ FC N ++EA
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/350 (18%), Positives = 140/350 (40%), Gaps = 49/350 (14%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
D T+N + + + + +++ M G++ ++ T+ V+ CK +K+AVE+
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVL 353
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIP-----NSMV--- 376
+ M D +P T+ CKE ++ + + +V + G +P NS++
Sbjct: 354 D-QMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVLTSKG-ILPDVCTFNSLIQGL 410
Query: 377 ----------------------------DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASA 408
+ ++ SL S G++ E +LK+ME G S
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 409 NWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKE 468
+ + + +A E + +E G + +++L+ G C + ++ A +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 469 MVKKEGISYAGAFDSLISSYC---NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLL 525
M+ + ++SL++ +C ++ +A D + + + +P TY L+S L
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAAD----IVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 526 AQGGFTDALNVFGLMKTHGF---PPFIDPFIRHISKRGSGDDAVQFLSAM 572
G A + ++ G P +P I+ + ++ +A+ M
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 113/538 (21%), Positives = 212/538 (39%), Gaps = 59/538 (10%)
Query: 77 AADPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWV-------------LET 123
+ P V D+N ++ + L ES VA FF W L T
Sbjct: 74 VSSPHRVNLDFDANSLTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVT 133
Query: 124 HPEMLSSKSYN-------AMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFE 176
+L++ + MLR G ++E MV M+ +G S LE
Sbjct: 134 ADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAV 193
Query: 177 KNGLEGDVVRLKALFDKNNCNSVEKD----------CARVCRIVRNNVWGDDVEREIKDL 226
+ GL + + +FD+ + V D C R +I + W + +
Sbjct: 194 ELGL---IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM------I 244
Query: 227 NVGF--SSEVVKLVLESLGSEP--SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTI 282
GF + L+L +L ++A+ +FR + + G K + + ++ + ++ +I
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSI 303
Query: 283 DRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFL 342
+ ++++ +M G++ + T ++ CKR + A L+ + +D P T+
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF-LKLVRSDTYKPNVHTYT 362
Query: 343 LKKVVTCKELDMDLFSRVVKVFS--GSGNAIPN-SMVDAVLKSLTSVGRIGEWNKVLKEM 399
CKE D +R +FS PN + ++ G G +++ M
Sbjct: 363 SMIGGYCKE---DKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLM 419
Query: 400 EDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNL 459
D G++ + + L +A E +N+ + G ++D + L+ C ++
Sbjct: 420 GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDI 479
Query: 460 DKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKL 519
++AL F M K + + LI+++C + ++ ++ +LV L P +TY
Sbjct: 480 NQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTS 538
Query: 520 LVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF-----IRHISKRGSGDDAVQFLSAM 572
++S +G AL F MK HG P D F I + K+ D+A + AM
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVP--DSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 4/223 (1%)
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
G+I E ++ L M G++ + I L G +A + ++ G + +
Sbjct: 231 GKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINF 290
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
SL+ G C G++ +A + +EMV+ +LI C A+++ +LV+
Sbjct: 291 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 350
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHIS---KRGSGD 563
KP TY ++ + A +F MK G P ++ + I+ K GS
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 564 DAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
A + ++ M + F P+ Y ++ KK R EA L+K
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 146/360 (40%), Gaps = 12/360 (3%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
+E + + V +++ VL G + FF W + H Y +M +++ +
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 279 EDTIDRFWKLVGDMRGAGFEM-EIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQ 337
W L+ +MR ++ E E FV ++ RF M+K A+E+ + +P
Sbjct: 160 MRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEY 219
Query: 338 CCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSM--VDAVLKSLTSVGRIGEWNKV 395
LL + CK + K+F P ++ ++L VG++ E V
Sbjct: 220 VFGCLLDAL--CKHGSV---KDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYV 274
Query: 396 LKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCV 455
L +M + G+ + + G+ A + + + G + + + L+ C
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCK 334
Query: 456 AGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHD 515
+++A+ F EM + E + + +L+S +C + Y +L +++K K L P
Sbjct: 335 VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK-KGLMPSEL 393
Query: 516 TYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAM 572
TY ++ + F + L + M+ + P I + IR K G +AV+ + M
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 163/395 (41%), Gaps = 44/395 (11%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
KA+ +E+ G + D YNA+ + + ID +++ MR F + T+ +
Sbjct: 142 KAVRVMEILEKFG--QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD-----MD-LFSRVV 361
+G C R + A+++ ++ +PT T L++ + +D MD + SR +
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 362 KVFSGSGNAIPNSMV---------------------------DAVLKSLTSVGRIGEWNK 394
K + N I M + +L++L + G+ E K
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 395 VLKEM--EDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVG 452
++ +M E C + S + L G+ E+A + ++ G D +D L+
Sbjct: 320 LMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 453 HCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKP 512
C G LD A++ + M+ + +++++++ C +A A +I +L E P
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL-GEVGCSP 436
Query: 513 RHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFL 569
+Y + S L + G AL++ M ++G P + I + + G D+A + L
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 570 SAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
M +F PS Y + F K R E+A N L
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 349 CKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEM--EDCG-YV 405
CK +D +RV+ + + ++ SL S G++ KVL ++ ++C V
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228
Query: 406 ASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDS 465
+ E G V E A + ++ + + G D +++++ G C G +D+A +
Sbjct: 229 ITYTILIEATMLEGGVDE---ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 466 FKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLL 525
+ + K +++ L+ + N + + K++ ++ EK P TY +L++ L
Sbjct: 286 VRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLC 344
Query: 526 AQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKK-FPSTS 581
G +A+N+ LMK G P DP I + G D A++FL M P
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 582 VYLRMFEAFFKKRRPEEAQNFLSK 605
Y + K + ++A K
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGK 428
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/290 (18%), Positives = 128/290 (44%), Gaps = 6/290 (2%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+A R +E G C+ D +YN + R + + + KL+ M + + T+ +
Sbjct: 281 RAFEMVRNLELKG-CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGS 367
+ C+ I++A+ L + TP ++ C+E +D+ ++
Sbjct: 340 ITTLCRDGKIEEAMNL--LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 368 GNAIPNSM-VDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
G +P+ + + VL +L G+ + ++ ++ + G +++ + + L + G+K +
Sbjct: 398 G-CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
A + + + G D D+ ++S++ C G +D+A + +M E ++ ++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNV 536
+C +R DA +L +V +P TY +L+ + G +A+ +
Sbjct: 517 GFCKAHRIEDAINVLESMVGNG-CRPNETTYTVLIEGIGFAGYRAEAMEL 565
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 120/285 (42%), Gaps = 3/285 (1%)
Query: 263 KHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVE 322
K D TYN + R + +E +DR +++V ++ G E ++ ++ +L + ++ +
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKS 382
L ++K P T+ + C++ ++ ++K+ G D ++ +
Sbjct: 320 L--MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 383 LTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSD 442
GR+ + L+ M G + + + L G+ +QA E ++ G +
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 443 QEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILC 502
++++ +G+ +AL EM+ ++S+IS C +A+++L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 503 ELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
++ + E P TY +++ DA+NV M +G P
Sbjct: 498 DM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Query: 438 GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDA 497
G + D + L+ G N+ KA+ E+++K G A+++LI+ +C MNR DA
Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAV-RVMEILEKFGQPDVFAYNALINGFCKMNRIDDA 177
Query: 498 YKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IR 554
++L + ++ K+ P TY +++ L ++G AL V + + P + + I
Sbjct: 178 TRVL-DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 555 HISKRGSGDDAVQFLSAM 572
G D+A++ + M
Sbjct: 237 ATMLEGGVDEALKLMDEM 254
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 189/413 (45%), Gaps = 30/413 (7%)
Query: 132 SYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALF 191
++ A+L L +V E +++ M R + ++ + GL VV+ KALF
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL---VVQAKALF 468
Query: 192 DKNNCNSVEKDCARVCRI---VRNNVWGDDVEREI----KDLNVGFSSEVVK--LVLESL 242
++ + V I +W VE E K G ++V++ +++++
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLW---VEAETVFYGKRNMSGQRNDVLEYNVMIKAY 525
Query: 243 GSEP--SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEME 300
G KAL F+ ++ G D CTYN++ +++ D +D +++ +M +G +
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWP-DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG 584
Query: 301 IETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDL-FSR 359
+T+ ++ + + ++ DAV+LYE KP L+ ++ + + R
Sbjct: 585 CKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFR 644
Query: 360 VVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGY---VASANWQSEIAF 416
+++ N I ++ +++K+ + VG + E +V +M+D VA++N +
Sbjct: 645 MMEEHGVQSNHI---VLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCA 701
Query: 417 RLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS 476
LG V E E N + G+ D + +++ + G LD+A++ +EM + +S
Sbjct: 702 DLGIVSEAES---IFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 477 YAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGG 529
+F+ +++ Y + + ++ E++ E++L T+K L + LL +GG
Sbjct: 758 DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT-LLKKGG 809
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 174/425 (40%), Gaps = 29/425 (6%)
Query: 180 LEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVW--GD-----DVEREIKDLNVGFSS 232
LEG V L D+ N + D IV N + GD D+ R++++ NV
Sbjct: 170 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIV-NGICRSGDTSLALDLLRKMEERNVKADV 228
Query: 233 EVVKLVLESLGSEPS--KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVG 290
+++SL + A+ F+ +E G+ K TYN++ R + + + L+
Sbjct: 229 FTYSTIIDSLCRDGCIDAAISLFKEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 291 DMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCK 350
DM + TF +L F K +++A ELY+ + P L+
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 351 ELD-----MDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGY 404
L +DL R P+ + +++K V R+ + KV + + G
Sbjct: 348 RLSEANNMLDLMVR--------NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 405 VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALD 464
VA+A S + G+ + A E + + G D + L+ G C G L+KAL+
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALE 459
Query: 465 SFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKL 524
F+++ K + + ++I C + DA+ + C L K +KP TY +++S L
Sbjct: 460 IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGL 518
Query: 525 LAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTS 581
+G ++A + M+ G P + IR + G + + + M F + +
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578
Query: 582 VYLRM 586
++M
Sbjct: 579 SSIKM 583
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 151/388 (38%), Gaps = 58/388 (14%)
Query: 230 FSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLV 289
F++ + L LE + S+A++ + E+G C+ D TYN++ I R L+
Sbjct: 161 FNTLIKGLFLEG---KVSEAVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 290 GDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTC 349
M + ++ T+ ++ C+ I A+ L+
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF------------------------- 251
Query: 350 KELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNK---VLKEM---EDCG 403
KE++ V + NS+V + K+ G+WN +LK+M E
Sbjct: 252 KEMETKGIKSSVVTY--------NSLVRGLCKA-------GKWNDGALLLKDMVSREIVP 296
Query: 404 YVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKAL 463
V + N ++ + G + ++ANE + G + +++L+ G+C+ L +A
Sbjct: 297 NVITFNVLLDVFVKEGKL---QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 464 DSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSK 523
+ MV+ + F SLI YC + R D K+ + ++ L TY +LV
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF-RNISKRGLVANAVTYSILVQG 412
Query: 524 LLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKFP-S 579
G A +F M +HG P + + + + G + A++ + K
Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 580 TSVYLRMFEAFFKKRRPEEAQNFLSKCP 607
+Y + E K + E+A N P
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 422 GEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM----VKKEGISY 477
G+ +A V+R+ G D ++S+V G C +G+ ALD ++M VK + +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 478 AGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVF 537
+ DSL C IDA L + ++ K +K TY LV L G + D +
Sbjct: 232 STIIDSLCRDGC-----IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 538 GLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKK 593
M + P + F + K G +A + M + P+ Y + + + +
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 594 RRPEEAQNFL-----SKCPRYIRNHADVLNLFC 621
R EA N L +KC I ++ +C
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/420 (20%), Positives = 162/420 (38%), Gaps = 47/420 (11%)
Query: 213 NVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAM 272
N WG V E+ L S V +++ LG++ + A FF W + KHD YNA
Sbjct: 107 NHWGPSVVSELNKLRRVTPSIVAEVL--KLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAF 164
Query: 273 ARVIGRE----------DTID-------------------------RFWKLVGDMRGAGF 297
A + R + +D R + + M+ GF
Sbjct: 165 AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGF 224
Query: 298 EMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLF 357
+ + + +++ K A+ +YE D + TF++ CK ++
Sbjct: 225 KPRVFLYNRIMDALVKNGYFDLALAVYE--DFKEDGLVEESTTFMILVKGLCKAGRIEEM 282
Query: 358 SRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFR 417
+++ + A++K+L S G + +V EM +
Sbjct: 283 LEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVG 342
Query: 418 LGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY 477
L G E+ E ++ D+EI+ L+ G G + A + ++++V I+
Sbjct: 343 LCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIAD 402
Query: 478 AGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVF 537
G ++++I C++N+ AYK+ ++ E+EL+P +T ++ + +D NV
Sbjct: 403 IGIYNAVIKGLCSVNQVDKAYKLF-QVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 538 GLMKTHGFPPFIDPFIRHISKRGSGDD-----AVQFLSAMTYKKFPSTSVYLRMFEAFFK 592
+ G+P + ++ K D+ A+ + K S SVY + EA +K
Sbjct: 462 ERIGELGYP--VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYK 519
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 139/622 (22%), Positives = 239/622 (38%), Gaps = 124/622 (19%)
Query: 69 IADLFSKP-AADPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEM 127
+ +F+K D + + QL +R N +V L LES + +R +V + +M
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESC--IKERRVEFVSWLYKDM 138
Query: 128 L------SSKSYNAMLRALGANGLVDEFWEMVSVMKRKG-------YGV------SRGVK 168
+ + ++N ++RAL + VD E+ M KG +G+ G+
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 169 ERALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLN- 227
++ LE N +E L +K N++ + CR RN DD E+ ++ +
Sbjct: 199 DKGLELL--NAMES----FGVLPNKVIYNTI---VSSFCREGRN----DDSEKMVEKMRE 245
Query: 228 -------VGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR-- 278
V F+S + L E + S+ E GL + + TYN M + +
Sbjct: 246 EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG 305
Query: 279 --EDTIDRF-----------------WKLVGDMRGAGFEMEIETFVK------------- 306
ED F W L G +R F +E ET +K
Sbjct: 306 LLEDAKTLFESIRENDDLASLQSYNIW-LQGLVRHGKF-IEAETVLKQMTDKGIGPSIYS 363
Query: 307 ---VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDM--DLFSRVV 361
++ CK M+ DA + P LL + ++D L ++
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 362 KVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGA 420
+ N +PN+ + +L SL +GRI E ++L++M + GY + I L
Sbjct: 424 R-----NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 421 VGEKEQANEFVNRIEAAGSDS-----------------------DQEIWDSLVVGHCVAG 457
GE ++A E V + GS + D + +L+ G C AG
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 458 NLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTY 517
+A + F EM+ ++ + A++ I +C + A+++L K+ E K H +
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL----KDMEKKGCHKSL 594
Query: 518 KLLVSKLLAQGGFTDALNVFGL---MKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSA 571
+ S +L G + GL MK G P I + I+++ + +DA L
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDE 654
Query: 572 MTYKKF-PSTSVYLRMFEAFFK 592
M K P+ + + EAF K
Sbjct: 655 MMQKNIAPNVFSFKYLIEAFCK 676
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 130/343 (37%), Gaps = 19/343 (5%)
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDA------VE 322
YN + RE D K+V MR G +I TF + CK + DA +E
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKS 382
L E+ P P T+ L CK ++ + + + + + L+
Sbjct: 280 LDEYL----GLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 383 LTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSD 442
L G+ E VLK+M D G S + + L +G A V ++ G D
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 443 QEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILC 502
+ L+ G+C G +D A +EM++ + A + L+ S M R +A ++L
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 503 ELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSG 562
++ EK T ++V L G A+ + M+ HG + +I G
Sbjct: 456 KM-NEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI---GLV 511
Query: 563 DDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
DD S + P Y + K R EA+N ++
Sbjct: 512 DD-----SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 187/465 (40%), Gaps = 62/465 (13%)
Query: 169 ERALECFEKNGLEGDVVRLKALFDKN-NCNSVEKDCARVCRIVRNNVWGDDVER-EIKDL 226
+ A+ECF +++ K + K CN + +R+ RI V+ D+ R EIK
Sbjct: 172 DEAIECFY-------LMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSN 224
Query: 227 NVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFW 286
F+ + L E + KA F +E G+ K TYN + + I+
Sbjct: 225 VYTFNIMINVLCKEG---KLKKAKGFLGIMEVFGI-KPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 287 KLVGDMRGAGFEMEIETFVKVLGRFCK--------RRM-----IKDAVEL---------- 323
++ +M+ GF+ +++T+ +L C R M + D+V
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 324 --YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSR--------VVKVFSGSGNAIPN 373
E A A D+ Q ++ T L LF +++ G + +
Sbjct: 341 GDLEMAFAYRDEMVKQG---MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 374 SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNR 433
+ ++ G + + EM G + + + + L + +A+E +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 434 IEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM----VKKEGISYAGAFDSLISSYC 489
+ G D + ++L+ GHC GN+D+A KEM + + ++Y + L+ C
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY----NCLMRGLC 513
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ +A +++ E+ K + +KP H +Y L+S +G A V M + GF P +
Sbjct: 514 GEGKFEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 550 ---DPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAF 590
+ ++ +SK G+ A + L M + P+ S + + EA
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 123/305 (40%), Gaps = 12/305 (3%)
Query: 252 FFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRF 311
FR +E G+ HD ++ + R + +G M GFE I TF ++ F
Sbjct: 101 LFRHLEMLGI-SHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGF 159
Query: 312 CKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAI 371
C +A+ L + + +P ++ + C++ ++ V+K G
Sbjct: 160 CHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL--CEKGQVNTALDVLKHMKKMGIRP 217
Query: 372 PNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGE----KEQA 427
++++ L G G ++L +M G S + G G+ K+Q
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
NE + R + + ++SL+ G C+ G LD+A +V K A +++LI+
Sbjct: 278 NEMIQR----SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
YC R D KILC + ++ + TY L G F+ A V G M + G P
Sbjct: 334 YCKAKRVDDGMKILCVMSRDG-VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHP 392
Query: 548 FIDPF 552
+ F
Sbjct: 393 DMYTF 397
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 131/336 (38%), Gaps = 43/336 (12%)
Query: 253 FRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFC 312
F V+ +G C D TYN + G+ ID ++L +M E T V+
Sbjct: 808 FLQVKSTG-CIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV 866
Query: 313 KRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIP 372
K + DA++LY M+ D +P CT+
Sbjct: 867 KAGNVDDALDLYYDLMSDRDF-SPTACTY------------------------------- 894
Query: 373 NSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVN 432
++D + KS GR+ E ++ + M D G + + + G GE + A
Sbjct: 895 GPLIDGLSKS----GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 433 RIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNM 491
R+ G D + + LV C+ G +D+ L FKE+ K+ G++ ++ +I+
Sbjct: 951 RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGLGKS 1009
Query: 492 NRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDP 551
+R +A + E+ + + P TY L+ L G +A ++ ++ G P +
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 552 F---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVY 583
F IR S G + A M F P+T Y
Sbjct: 1070 FNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 143/355 (40%), Gaps = 14/355 (3%)
Query: 252 FFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRF 311
+ +E GL K + T+ RV+GR I+ ++++ M G ++ T+ ++
Sbjct: 245 LLKEMETLGL-KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303
Query: 312 CKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGN 369
C R + A E++E G KP LL + ++LD +S + K
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK-----DG 358
Query: 370 AIPNSMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQAN 428
+P+ + +L +L G GE L M D G + + + + + L V + A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 429 EFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSY 488
E +E+ G + + + +G+ AL++F++M K A ++ + S
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 489 CNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP- 547
R +A +I L K+ L P TY +++ G +A+ + M +G P
Sbjct: 479 AKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 548 --FIDPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
++ I + K D+A + M K P+ Y + K + +EA
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 163/421 (38%), Gaps = 24/421 (5%)
Query: 161 YGVSRGVKERALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVE 220
YG S G ALE FEK +G + A CN+ A+ R + +
Sbjct: 443 YGKS-GDSVSALETFEKMKTKGIAPNIVA------CNASLYSLAKAGR----DREAKQIF 491
Query: 221 REIKDLNVGFSSEVVKLVLESLG--SEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
+KD+ + S ++++ E +A+ + E+G C+ D N++ + +
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG-CEPDVIVVNSLINTLYK 550
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQC 338
D +D WK+ M+ + + T+ +L K I++A+EL+E M P P
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE-GMVQKGCP-PNT 608
Query: 339 CTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLK 397
TF CK ++ L +++ G +P+ + ++ L G++ E
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 398 EMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAG 457
+M+ Y + + + A ++ N + W+ L+
Sbjct: 668 QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEA 727
Query: 458 NLDKALDSFKEMVKKEGISYAG--AFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHD 515
+D A+ SF E + GI G +I C N A + + K+ ++P+
Sbjct: 728 GIDNAV-SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 516 TYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAM 572
TY LL+ LL A +VF +K+ G P + + + K G D+ + M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 573 T 573
+
Sbjct: 847 S 847
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 438 GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDA 497
G D D + +L+ G C G +D+A F EMV+K+ + SLI+ C +A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 498 YKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IR 554
+ L E+ K K ++P TY L+ L G A+ +F +M G P + + I
Sbjct: 247 MRYLEEM-KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305
Query: 555 HISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
+ K +AV+ L M + P +Y ++ F + EA NFL
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFL 355
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 147/381 (38%), Gaps = 50/381 (13%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE-F 326
TYN + R ID L M G + T+ ++ +CK R I D +L
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 327 AMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSV 386
A+ G + P ++ + C+E M S V+ + G ++ + ++K
Sbjct: 267 ALKGLE---PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
G + + EM G S + + + G +A EF++++ G ++ +
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 447 -----------------------------------DSLVVGHCVAGNLDKALDSFKEMVK 471
++L+ GHCV G ++ A+ ++M K
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-K 442
Query: 472 KEGISY-AGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGF 530
++G+S ++ +++S +C +A ++ E+V EK +KP TY L+ Q
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCEQRRT 501
Query: 531 TDALNVFGLMKTHGFPPFIDPF-----IRHISKRGSGDDAVQFLSAMTYKK-FPSTSVYL 584
+A +++ M G PP D F I G + A+Q + M K P Y
Sbjct: 502 KEACDLYEEMLRVGLPP--DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 585 RMFEAFFKKRRPEEAQNFLSK 605
+ K+ R EA+ L K
Sbjct: 560 VLINGLNKQSRTREAKRLLLK 580
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 143/354 (40%), Gaps = 26/354 (7%)
Query: 215 WGDDVEREIKDLN-VGFSSEVVK----LVLESLGSEPSKALIFFRWVEESGLCKHDGCTY 269
+ ++ R ++++N GFS VV + + + A+ ++E GL D +Y
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP-DVVSY 453
Query: 270 NAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMA 329
+ + R +D ++ +M G + + T+ ++ FC++R K+A +LYE +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 330 GADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVL-KSLTSVGR 388
P T L+ C E D++ ++ G +P+ + +VL L R
Sbjct: 514 VGLPPDEFTYTALINAY--CMEGDLEKALQLHNEMVEKG-VLPDVVTYSVLINGLNKQSR 570
Query: 389 IGEWNKVLKEM-------EDCGYVASANWQSEIAFR--------LGAVGEKEQANEFVNR 433
E ++L ++ D Y S I F+ G +A++
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 434 IEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNR 493
+ D ++ ++ GHC AG++ KA +KEMVK + + +L+ + +
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 690
Query: 494 AIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+ ++ +++ EL K+LV +G L+V M GF P
Sbjct: 691 VNELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLDVLAEMAKDGFLP 743
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 137/329 (41%), Gaps = 41/329 (12%)
Query: 219 VEREIKDLNVGFSSEVVKLVLESL--GSEPSKALIFFRWVEESGLCKHDGCTYNAMARVI 276
V EIK V S+ V ++ KA ++ + G C+ D TYN +
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG-CEPDLVTYNVLLNYY 265
Query: 277 GREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTP 336
+ + R ++ +M +G +++ ++ ++L R C+ ++ DK
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR--------------VSHPDK--- 308
Query: 337 QCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVL 396
C F++K++ D+ +S +++ F + N + ++
Sbjct: 309 -CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT-------------------RKAYRLF 348
Query: 397 KEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVA 456
+EM G V + + + G A + ++++ G D+ + +++ C +
Sbjct: 349 EEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKS 408
Query: 457 GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDT 516
GN+DKA F +M++ E A +++SLIS C R +A K+ E +K KE P T
Sbjct: 409 GNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF-EDMKGKECCPDELT 467
Query: 517 YKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
+K ++ L+ + A V+ M GF
Sbjct: 468 FKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 147/363 (40%), Gaps = 26/363 (7%)
Query: 201 KDCARVCRIVRNNVWGD-DVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEES 259
++ RVC+++ D ++E + ++ + S +++ VLE A FF W E
Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAER 188
Query: 260 GLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKD 319
HD TYN+M ++ + + ++ +M G + +ETF + F + K
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 320 AVELYEFAMAGADK---PTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV 376
AV ++E K T C L + KE + LF ++ + F+ PN M
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV-LFDKLKERFT------PNMMT 300
Query: 377 DAVL-------KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
VL ++L RI WN +M D G + + L +K A +
Sbjct: 301 YTVLLNGWCRVRNLIEAARI--WN----DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
+ +++ G + + ++ C +++ A++ F +MV A + LI+ +
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ Y++L E+ +EK P TY L+ + Q A ++ M + P I
Sbjct: 415 TQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSI 473
Query: 550 DPF 552
F
Sbjct: 474 HTF 476
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 116/260 (44%), Gaps = 6/260 (2%)
Query: 349 CKELDMDLFSRVVKVFSGSGNAIPNSMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVAS 407
C+ L++ +V V S PNS+ ++L L VGR+ E + +M + G S
Sbjct: 241 CRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPS 300
Query: 408 ANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFK 467
+ + L G ++A + + G + + L+ G C G +++A +
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCR 360
Query: 468 EMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQ 527
+MVK +++LI+ YC R + A+++L +++++ KP T+ L+ L
Sbjct: 361 KMVKDRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEKRACKPNVRTFNELMEGLCRV 419
Query: 528 GGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMT-YKKFPSTSVY 583
G A+++ M +G P I + I + + G + A + LS+M + P +
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Query: 584 LRMFEAFFKKRRPEEAQNFL 603
+ AF K+ + + A FL
Sbjct: 480 TAIINAFCKQGKADVASAFL 499
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 156/395 (39%), Gaps = 32/395 (8%)
Query: 252 FFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRF 311
+F + E G C + TY A+ + + +L M G I T+ ++
Sbjct: 540 WFNEMREVG-CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 312 CKRRMIKDAVELYEFAMAGADKPT--------------PQCCTFLLKKVVTCKELDMDLF 357
CK ++ A +++E D P P T+ CK ++
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 358 SRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAF 416
+++ S G PN +V DA++ L VG++ E +V EM + G+ A+ S +
Sbjct: 659 RKLLDAMSMEGCE-PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLID 717
Query: 417 RLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS 476
R V ++ A++ ++++ + I+ ++ G C G D+A + M +K
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Query: 477 YAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNV 536
+ ++I + M I+ L E + K + P + TY++L+ G A N+
Sbjct: 778 NVVTYTAMIDGF-GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836
Query: 537 FGLMK-------THGFPPFIDPFIRH-ISKRGSGDDAVQFLSAMTYKKFPSTSVYLRMFE 588
MK T G+ I+ F + I G D+ Q +A P SVY + +
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTA------PFLSVYRLLID 890
Query: 589 AFFKKRRPEEAQNFLSKCPRYIRNHADVLNLFCSM 623
K +R E A L + + D + + S+
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 143/371 (38%), Gaps = 24/371 (6%)
Query: 243 GSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIE 302
S+ A + F ++ GL D TY M + I++ K +MR G +
Sbjct: 496 ASKMELAFLLFEEMKRGGLVA-DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 303 TFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVK 362
T+ ++ + K + + A EL+E ++ P + L+ CK ++ ++ +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG--HCKAGQVEKACQIFE 612
Query: 363 VFSGSGNAI---------------PNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVA 406
GS + PN + A+L R+ E K+L M G
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 407 SANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSF 466
+ + L VG+ ++A E + G + + SL+ + D A
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 732
Query: 467 KEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLA 526
+M++ + +I C + + +AYK++ ++++EK +P TY ++
Sbjct: 733 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 527 QGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKFPS-TSV 582
G L + M + G P + I H K G+ D A L M +P+ T+
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 583 YLRMFEAFFKK 593
Y ++ E F K+
Sbjct: 852 YRKVIEGFNKE 862
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/409 (20%), Positives = 163/409 (39%), Gaps = 39/409 (9%)
Query: 212 NNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNA 271
++V+G ++ ++ S +V VL L + PS + FF W KH YNA
Sbjct: 112 DDVFGRKSQKFLRQFREKLSESLVIEVLR-LIARPSAVISFFVWAGRQIGYKHTAPVYNA 170
Query: 272 MARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVE----LYEFA 327
+ +I R+D + + +R E+ E ++ + C+ A+E L +F
Sbjct: 171 LVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFR 230
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELD-MDLFSRVVKVFSGSGNAIPNSMVDA-VLKSLT- 384
+P+ L++ + LD L R + ++ N +D L+
Sbjct: 231 F----RPSRSTYNCLIQAFLKADRLDSASLIHREM--------SLANLRMDGFTLRCFAY 278
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
S+ ++G+W + L +E +V + +++ L E+A +F+NR+ A +
Sbjct: 279 SLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVV 338
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
+ +L+ G L + M+ + F+SL+ +YC AYK+L ++
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 505 VKEKELKPRHDTYKLLVSKL-------------LAQGGFTDALNVFGLMKTHGFPPFIDP 551
VK + P + Y +L+ + LA+ +++ L ++ +
Sbjct: 399 VKCGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN----VSS 453
Query: 552 FIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
F R + G + A + M + F P TS Y ++ + E A
Sbjct: 454 FTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 19/265 (7%)
Query: 360 VVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLG 419
V++ G G S VL L + ++ + +EM+ G VA + +
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529
Query: 420 AVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAG 479
G EQA ++ N + G + + +L+ + A + A + F+ M+ + +
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589
Query: 480 AFDSLISSYCNMNRAIDAYKILCELVKEKEL---------------KPRHDTYKLLVSKL 524
+ +LI +C + A +I + K++ +P TY L+
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649
Query: 525 LAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKFPST- 580
+A + M G P D I + K G D+A + + M+ FP+T
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709
Query: 581 SVYLRMFEAFFKKRRPEEAQNFLSK 605
Y + + +FK +R + A LSK
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSK 734
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 140/367 (38%), Gaps = 45/367 (12%)
Query: 244 SEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIET 303
+ + A+ R +EE + K D Y+ + + + ++D + L +M G I T
Sbjct: 242 GQTALAMELLRKMEERNI-KLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 304 FVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
+ ++G FC D +L D+ R +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLR-----------------------------DMIKRKIN- 330
Query: 364 FSGSGNAIPNSMVDAVL-KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVG 422
PN + +VL S G++ E ++ KEM G + +
Sbjct: 331 --------PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 423 EKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFD 482
++AN+ V+ + + G D + ++ L+ G+C A +D L+ F++M + ++ ++
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 483 SLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKT 542
+LI +C + + A ++ E+V K + P TYK+L+ L G AL +F ++
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 543 HGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEE 598
I + I + DDA ++ K P Y M KK E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 599 AQNFLSK 605
A+ K
Sbjct: 562 AELLFRK 568
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 147/348 (42%), Gaps = 11/348 (3%)
Query: 221 REIKDLNVGFSSEVVKLVLESLGSEPS--KALIFFRWVEESGLCKHDGCTYNAMARVIGR 278
R++++ N+ + ++++ L S A F +E G+ + TYN +
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI-TTNIITYNILIGGFCN 310
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQC 338
D KL+ DM + TF ++ F K +++A EL++ + P
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 339 CTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKE 398
T L+ CKE +D +++V + G + ++ RI + ++ ++
Sbjct: 371 YTSLIDGF--CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 399 MEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGN 458
M G VA + + +G+ A E + + + + L+ G C G
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 459 LDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYK 518
+KAL+ F+++ K + G ++ +I CN ++ DA+ + C L K +KP TY
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYN 547
Query: 519 LLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKR---GSGD 563
+++ L +G ++A +F M+ G P D + +I R G GD
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAP--DGWTYNILIRAHLGDGD 593
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 13/238 (5%)
Query: 376 VDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIE 435
++ ++ L G+ E ++ +M + G +A + + G+ A E + ++E
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 436 AAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAI 495
D + ++ G C G+LD A + F EM K + ++ LI +CN R
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 496 DAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP-------F 548
D K+L +++K K + P T+ +L+ + +G +A + M G P
Sbjct: 316 DGAKLLRDMIKRK-INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 549 IDPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
ID F K D A Q + M K P+ + + + K R ++ K
Sbjct: 375 IDGF----CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 373 NSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVN 432
N+++D ++ R+ E ++L+E+ G VA+ + + V A +
Sbjct: 436 NTIIDVYCRA----KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 433 RIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNM 491
+ + G D + L+ G C L++AL+ F E+++ I A++ +I C
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 492 NRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---F 548
++ +A+ + C L ++P TY +++S + +DA +F MK +G P
Sbjct: 551 SKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 549 IDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEE-AQNFL---- 603
+ IR K G D +++ +S M F + ++M E + EE +N+L
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKI 669
Query: 604 ----SKCPRYIRNHADVL 617
S PRY+ A+ L
Sbjct: 670 NGETSSIPRYVVELAEEL 687
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 117/302 (38%), Gaps = 15/302 (4%)
Query: 252 FFRWVEESGLCKH--------DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIET 303
F RW + L + D T+NA+ +E + KL +M + T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 304 FVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
+ ++ FCK DA +++ +P TF V C+ +D ++++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 364 FSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGE 423
S G + + ++ V + + +EM G + + + +
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 424 KEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDS 483
E+A E I+ + D D ++ ++ G C +D+A D F + ++
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 484 LISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTH 543
+IS +C + DA +L +K+ +P + TY L+ L G ++ + M+++
Sbjct: 578 MISGFCGKSAISDA-NVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 636
Query: 544 GF 545
GF
Sbjct: 637 GF 638
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 131/322 (40%), Gaps = 29/322 (9%)
Query: 290 GDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTC 349
G + GF+ ++ TF +L C I +A+ L+ + + T L+ V
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE----------TGFLEAVA-- 212
Query: 350 KELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASAN 409
LF ++V++ N++++ L GR+ E ++ +M G
Sbjct: 213 ------LFDQMVEIGLTPVVITFNTLING----LCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 410 WQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM 469
I + +G+ + A ++++E D I+ +++ C G+ A F EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 470 VKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGG 529
++K ++ +I +C+ R DA ++L +++ E+E+ P T+ L+S + +G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGK 381
Query: 530 FTDALNVFG-LMKTHGFPPFI--DPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLRM 586
+A + ++ FP + + I K DDA M P + +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNTI 438
Query: 587 FEAFFKKRRPEEAQNFLSKCPR 608
+ + + +R +E L + R
Sbjct: 439 IDVYCRAKRVDEGMQLLREISR 460
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 137/349 (39%), Gaps = 48/349 (13%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
C D TY + R+ + KL+ +MR G ++ T+ ++ CK + +A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
+ D P+ C N I +++ +L+
Sbjct: 295 KFLN------DMPSSGC----------------------------QPNVITHNI---ILR 317
Query: 382 SLTSVGRIGEWNKVLKEMEDCGY---VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAG 438
S+ S GR + K+L +M G+ V + N R G +G +A + + ++ G
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG---RAIDILEKMPQHG 374
Query: 439 SDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAY 498
+ ++ L+ G C +D+A++ + MV + +++++++ C + DA
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 499 KILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRH 555
+IL +L K P TY ++ L G A+ + M+ P +
Sbjct: 435 EILNQL-SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 556 ISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
+S+ G D+A++F P+ + + K R+ + A +FL
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 144/349 (41%), Gaps = 13/349 (3%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+ T + M R + + +G + G+E + TF ++ C + +A+EL
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMV-DAVL 380
+ + KPT L+ + ++ + L R+V+ PN + VL
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET-----GFQPNEVTYGPVL 219
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSD 440
K + G+ ++L++ME+ A S I L G + A N +E G
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 441 SDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKI 500
+D I+ +L+ G C AG D ++M+K++ AF +LI + + +A ++
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 501 LCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHIS 557
E++ ++ + P TY L+ + A ++ LM + G P I F I
Sbjct: 340 HKEMI-QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 558 KRGSGDDAVQFLSAMTYKKFPSTSV-YLRMFEAFFKKRRPEEAQNFLSK 605
K DD ++ M+ + + +V Y + + F + + E A+ +
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 138/330 (41%), Gaps = 11/330 (3%)
Query: 220 EREIKDLNVGFSSEVVKLVLESLGSEPS--KALIFFRWVEESGLCKHDGCTYNAMARVIG 277
ER+IK V +S ++++ L + S A F +E G K D Y + R
Sbjct: 240 ERKIKLDAVKYS-----IIIDGLCKDGSLDNAFNLFNEMEIKGF-KADIIIYTTLIRGFC 293
Query: 278 REDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQ 337
D KL+ DM ++ F ++ F K +++A EL++ + P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 338 CCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLK 397
T L+ CKE +D + ++ + G + ++ I + ++ +
Sbjct: 354 TYTSLIDGF--CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411
Query: 398 EMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAG 457
+M G VA + + +G+ E A E + + D + L+ G C G
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 458 NLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTY 517
+KAL+ F+++ K + G ++ +I CN ++ DA+ + C L K +KP TY
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPDVKTY 530
Query: 518 KLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+++ L +G ++A +F M+ G P
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 114/238 (47%), Gaps = 5/238 (2%)
Query: 311 FCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNA 370
+ + MI+D++E++ P+ C +L VV E D+ ++S + ++
Sbjct: 173 YLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGE-DVSVWSFLKEMLKR--KI 229
Query: 371 IPN-SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
P+ + + ++ L + G + + ++++ME GY + + + G + A E
Sbjct: 230 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
++ +++ G D+D ++ L+ C + + K ++M K+ +++LI+ +
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
N + + A ++L E++ L P H T+ L+ +++G F +AL +F +M+ G P
Sbjct: 350 NEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 144/380 (37%), Gaps = 38/380 (10%)
Query: 252 FFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRF 311
F+ ++ +G+C TY M + + +D L+ +M G + +I T+ ++ F
Sbjct: 430 FYMRMKRNGVCVGR-ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488
Query: 312 CKRRMIKDAVEL----YEFAMA--GADKPTP--QCCTF-LLKKVVTCKEL--------DM 354
CK K A E+ Y ++ G T CC LK+ + E D
Sbjct: 489 CKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDH 548
Query: 355 DLFSRVVKVFSGSGNA---------------IPNSM-VDAVLKSLTSVGRIGEWNKVLKE 398
F+ +V +G +PN++ D ++ + G + V E
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 399 MEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGN 458
M G+ + + L G +A +F+ + A + D ++++L+ C +GN
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 459 LDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYK 518
L KA+ F EMV++ + + + SLIS C + + A E + P Y
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 519 LLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYK 575
V + G + + M G P I + I S+ G + L M +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 576 K-FPSTSVYLRMFEAFFKKR 594
P+ + Y + + K++
Sbjct: 789 NGGPNLTTYNILLHGYSKRK 808
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 122/312 (39%), Gaps = 14/312 (4%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
TYN + E + +L+ +M G TF ++ K+A++++
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDL----FSRVVKVFSGSGNAIPNSMVDAVLKSL 383
A P+ LL + CK + DL + R+ + G M+D + K+
Sbjct: 400 EAKGLTPSEVSYGVLLDGL--CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN- 456
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
G + E +L EM G S + VG + A E V RI G +
Sbjct: 457 ---GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+ +L+ C G L +A+ ++ M+ + F+ L++S C + +A + +
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM-R 572
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRG 560
+ + P ++ L++ G A +VF M G P + ++ + K G
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 561 SGDDAVQFLSAM 572
+A +FL ++
Sbjct: 633 HLREAEKFLKSL 644
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 146/363 (40%), Gaps = 26/363 (7%)
Query: 201 KDCARVCRIVRNNVWGD-DVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEES 259
++ RVC+++ D ++E + ++ + S +++ VLE A FF W E
Sbjct: 128 EEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAER 187
Query: 260 GLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKD 319
HD TYN+M ++ + + ++ +M G + +ETF + F + K
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 246
Query: 320 AVELYEFAMAGADK---PTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV 376
AV ++E K T C L + KE + LF ++ + F+ PN M
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV-LFDKLKERFT------PNMMT 299
Query: 377 DAVL-------KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
VL ++L RI WN +M D G + + L +K A +
Sbjct: 300 YTVLLNGWCRVRNLIEAARI--WN----DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
+ +++ G + + ++ C +++ A++ F +MV A + LI+ +
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ Y++L E+ +EK P TY L+ + Q ++ M + P I
Sbjct: 414 TQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 472
Query: 550 DPF 552
F
Sbjct: 473 HTF 475
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 15/345 (4%)
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAM 328
Y + R + + R +++ M G ++ I + ++ CK++ + +AV + + +
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK-DL 288
Query: 329 AGADKPTPQCCTFLLKKVVTCK----ELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLT 384
AG D P T+ CK E+ +++ ++ + A +S+V+ + K
Sbjct: 289 AGKDLK-PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR-- 345
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
G+I E ++K + D G + + + L + +A +R+ G +
Sbjct: 346 --GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
+ L+ C G LD AL EMV ++SLI+ +C A + E+
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 505 VKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHIS---KRGS 561
+ K+L+P TY L+ ++G AL ++ M G P I F +S + G
Sbjct: 464 IN-KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 562 GDDAVQFLSAMT-YKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
DAV+ + M + P+ Y M E + ++ +A FL +
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 125/309 (40%), Gaps = 24/309 (7%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
AL F + ++GL K YN++ + I + +M E + T+ ++
Sbjct: 421 ALSFLGEMVDTGL-KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFS--G 366
G +C + I A+ LY P+ T LL + L VK+F+
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL-----FRAGLIRDAVKLFNEMA 534
Query: 367 SGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKE 425
N PN + + +++ G + + + LKEM + G V + L G+
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 426 QANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKK----EGISYAGAF 481
+A FV+ + + ++ + L+ G C G L++AL +EMV++ + + Y
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 482 DSLISSYCNMNRAIDAYKILCELVKE---KELKPRHDTYKLLVSKLLAQGGFTDALNVFG 538
D S + +R K+ L+KE + LKP Y ++ G F +A ++
Sbjct: 655 D---GSLKHKDR-----KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 539 LMKTHGFPP 547
LM G P
Sbjct: 707 LMINEGCVP 715
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 155/395 (39%), Gaps = 15/395 (3%)
Query: 205 RVCRIVRNN-VWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCK 263
++ RI+RN+ +E + + + ++ VL G + FF W +
Sbjct: 69 KIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYF 128
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEM-EIETFVKVLGRFCKRRMIKDAVE 322
H +M ++ + W L+ +MR E+ E E FV ++ RF M+K AVE
Sbjct: 129 HSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVE 188
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSM--VDAVL 380
+ + +P LL + CK + S KVF P ++ ++L
Sbjct: 189 VLDEMPKYGLEPDEYVFGCLLDAL--CKNGSVKEAS---KVFEDMREKFPPNLRYFTSLL 243
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSD 440
G++ E +VL +M++ G + + G+ A + +N + G +
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFE 303
Query: 441 SDQEIWDSLVVGHC-VAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYK 499
+ + L+ C +D+A+ F EM + + + +LIS +C Y
Sbjct: 304 PNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYS 363
Query: 500 ILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHI 556
+L ++ ++K + P TY ++ + F + L + MK G P + IR
Sbjct: 364 VLDDM-RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLA 422
Query: 557 SKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAF 590
K G +AV+ + M P ++ M F
Sbjct: 423 CKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 199/483 (41%), Gaps = 72/483 (14%)
Query: 103 LLKLESSPEVAQRFFRWVLETHPEMLSSKSY----------------NAMLRALGAN--- 143
L++L+ P++A +FF+W + + S +SY N++L+ + +
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKAD 174
Query: 144 -GLVDEFWEMVSVMKRKGYGV---------SRGVKERALECFEKNGLEGDVVRLKALFDK 193
+ D W +V G+GV G+ E A++CF K + R +
Sbjct: 175 CDVFDVLWSTRNVCV-PGFGVFDALFSVLIDLGMLEEAIQCFSK------MKRFRVFPKT 227
Query: 194 NNCNSVEKDCARVCRIVRNNVWGDDVEREIKDL-------NVGFSSEVVKLVLESLGSEP 246
+CN + A++ + DDV+R KD+ V + ++ + + E
Sbjct: 228 RSCNGLLHRFAKLGKT-------DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
++ L F ++ GL D TYN+M G+ +D +M+ E ++ T+
Sbjct: 281 ARGL--FEEMKFRGLVP-DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG 366
++ FCK + +E Y KP + L+ CKE + + +K +
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF--CKE---GMMQQAIKFYVD 392
Query: 367 SGNA--IPN-----SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLG 419
+PN S++DA K +G + + ++ EM G + + + L
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCK----IGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 420 AVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-A 478
++A E +++ AG + +++L+ G A N+D+AL+ E+ K GI
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRGIKPDL 507
Query: 479 GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFG 538
+ + I C++ + I+A K++ +KE +K Y L+ G T+ L++
Sbjct: 508 LLYGTFIWGLCSLEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLD 566
Query: 539 LMK 541
MK
Sbjct: 567 EMK 569
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 116/289 (40%), Gaps = 5/289 (1%)
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
+A+ F+ + GL ++ TY ++ + + ++L +M G E + T+
Sbjct: 384 QQAIKFYVDMRRVGLVPNEY-TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG 366
++ C +K+A EL+ P L+ V K +D L ++ G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL--ELLNELKG 500
Query: 367 SGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
G + + L S+ +I V+ EM++CG A++ + + G +
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGI-SYAGAFDSLI 485
++ ++ + + L+ G C + KA+D F + G+ + A F ++I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 486 SSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDAL 534
C N+ ++A L E + +K L P Y L+ QG +AL
Sbjct: 621 DGLCKDNQ-VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEAL 668
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 129/344 (37%), Gaps = 50/344 (14%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
HD TY+ R + ++ M G+E +I T +L +C + I DAV L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + KP TF ++ G + N +AV
Sbjct: 176 VDQMVEMGYKPD----TFTFTTLI-------------------HGLFLHNKASEAV---- 208
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
++ +M G + L G+ + A +N++EAA ++
Sbjct: 209 ----------ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+++++ C +++ A+D F EM K ++SLI+ CN R DA ++L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP-------FIDPFIRHI 556
++ EK++ P T+ L+ +G +A + M P I+ F H
Sbjct: 319 ML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH- 376
Query: 557 SKRGSGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
D+A Q M K P+ Y + F K +R E+
Sbjct: 377 ---NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 141/365 (38%), Gaps = 49/365 (13%)
Query: 242 LGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEI 301
L ++ S+A+ + + G C+ D TY + + + ID L+ M A + +
Sbjct: 200 LHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 302 ETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVV 361
F ++ CK R ++ AV+L+ +P VVT
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP----------NVVT------------- 295
Query: 362 KVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGY---VASANWQSEIAFRL 418
++++ L + GR + +++L M + V + N + F+
Sbjct: 296 --------------YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 419 GAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYA 478
G + E E+ +E + D D ++ L+ G C+ LD+A FK MV K+ +
Sbjct: 342 GKLVEAEKLHE---EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 479 GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFG 538
+++LI+ +C R D ++ E+ ++ L TY ++ G A VF
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 539 LMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKFP-STSVYLRMFEAFFKKR 594
M ++ P I + + + G D A+ + + + +Y M E K
Sbjct: 458 QMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAG 517
Query: 595 RPEEA 599
+ EA
Sbjct: 518 KVGEA 522
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 124/300 (41%), Gaps = 9/300 (3%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
A+ F +E G+ + + TYN++ + +L+ +M + TF ++
Sbjct: 277 AVDLFTEMETKGI-RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
F K + +A +L+E + + P L+ C +D ++ K F S
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF--CMHNRLDEAKQMFK-FMVSK 392
Query: 369 NAIPN-SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
+ +PN + ++ R+ + ++ +EM G V + + I G+ + A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
++ + +D + L+ G C G LD AL FK + K E ++++I
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEG 512
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
C + +A+ + C L +KP TY ++S L ++ +A ++F MK G P
Sbjct: 513 MCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 156/383 (40%), Gaps = 19/383 (4%)
Query: 238 VLESLG--SEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGA 295
V+++ G S P +AL F+ + E C+ +YN + + L A
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 296 GFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD-- 353
G ++T+ ++ CK++ + A ++ KP + ++ + +LD
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 354 MDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSE 413
++LF + + N ++D LK + W+++L ED + +
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL---EDSSVYPNVKTHNI 260
Query: 414 IAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKE 473
+ L G + + R++ + D + SL+ G C AGN+DKA F E+ +++
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 474 GISYAGAFDSLISSYC---NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGF 530
+++++ +C + +++ ++I+ E + +Y +L+ LL G
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIM-----EHKNSVNIVSYNILIKGLLENGKI 375
Query: 531 TDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAM-TYKKFPSTSVYLRM 586
+A ++ LM G+ FI + G + A+ + + + Y +
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 587 FEAFFKKRRPEEAQNFLSKCPRY 609
+ KK+R EEA N + + ++
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKH 458
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 164/412 (39%), Gaps = 16/412 (3%)
Query: 196 CNSVEKDCARVCRIVRNNVWGDDVEREIKDLN----VGFSSEVVKL--VLESLG--SEPS 247
C V D + G VE +K + G + VV V++ LG
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+A +F + E G+ + TY+ + + + R I + ++ +M GF + + +
Sbjct: 313 EAFMFKEKMVERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGS 367
+ F + + A+E+ + ++ T L+K CK D R++K
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY--CKNGQADNAERLLKEMLSI 429
Query: 368 GNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
G + +V+ L S + + EM + + L G+ +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
E + G D ++L+ G C AG LD+A KE++ + + ++++LIS
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
C + +A+ L E+VK + LKP + TY +L+ L +A+ + K +G P
Sbjct: 550 CCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 548 FIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRR 595
+ + I K ++ +F M K P+T VY + A+ + R
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 164/412 (39%), Gaps = 16/412 (3%)
Query: 196 CNSVEKDCARVCRIVRNNVWGDDVEREIKDLN----VGFSSEVVKL--VLESLG--SEPS 247
C V D + G VE +K + G + VV V++ LG
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+A +F + E G+ + TY+ + + + R I + ++ +M GF + + +
Sbjct: 313 EAFMFKEKMVERGM-EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGS 367
+ F + + A+E+ + ++ T L+K CK D R++K
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY--CKNGQADNAERLLKEMLSI 429
Query: 368 GNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
G + +V+ L S + + EM + + L G+ +A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
E + G D ++L+ G C AG LD+A KE++ + + ++++LIS
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
C + +A+ L E+VK + LKP + TY +L+ L +A+ + K +G P
Sbjct: 550 CCGKKKLDEAFMFLDEMVK-RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 548 FIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRR 595
+ + I K ++ +F M K P+T VY + A+ + R
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/505 (19%), Positives = 199/505 (39%), Gaps = 64/505 (12%)
Query: 54 SSDPVLEQPDPDHAIIADLFSKPAADPSVVKSQLDSNRVSINHDAVIAELLK-LESSPE- 111
S DP L +P H + P V++S ++ N S D+V++EL + + PE
Sbjct: 81 SRDPNLGKPWSYHGL------SPQGQ-QVLRSLIEPNFDSGQLDSVLSELFEPFKDKPES 133
Query: 112 -------------------VAQRFFRWVLET--HPEMLSSKSYNAMLRALGANGLVDEFW 150
+A R F W ++ + ML + ++ LG G V
Sbjct: 134 TSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAA 193
Query: 151 EMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIV 210
M + ++ G+ + + F +G + V + F K +E+D + I
Sbjct: 194 NMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV---FKK-----MEEDGCKPTLIT 245
Query: 211 RN---NVWG---------DDVEREIKDLNVGFSSEVVKLVLESL--GSEPSKALIFFRWV 256
N NV+G + ++K + + ++ GS +A F +
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 257 EESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRM 316
+ +G +D TYNA+ V G+ K++ +M GF I T+ ++ + + M
Sbjct: 306 KAAGF-SYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGM 364
Query: 317 IKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNA--IPN- 373
+ +A+EL KP T LL +++ + +F NA PN
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE-----SAMSIFEEMRNAGCKPNI 419
Query: 374 SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVAS-ANWQSEIAFRLGAVGEKEQANEFVN 432
+A +K + G+ E K+ E+ CG W + +A G G + +
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV-FGQNGMDSEVSGVFK 478
Query: 433 RIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMN 492
++ AG ++E +++L+ + G+ ++A+ ++ M+ +++++++
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 493 RAIDAYKILCELVKEKELKPRHDTY 517
+ K+L E+ ++ KP TY
Sbjct: 539 MWEQSEKVLAEM-EDGRCKPNELTY 562
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 174/428 (40%), Gaps = 23/428 (5%)
Query: 132 SYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALF 191
+YN+++ A +G++DE E+ + M KG L FE+ G V ++F
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER---AGKVESAMSIF 407
Query: 192 DK-NNCNSVEKDCA--RVCRIVRNNVWGDDVEREIKDLNV-GFSSEVV--KLVLESLGSE 245
++ N C ++ N ++ + ++NV G S ++V +L G
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 246 --PSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIET 303
S+ F+ ++ +G T+N + R + ++ + M AG ++ T
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERE-TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 304 FVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
+ VL + M + + ++ G KP LL KE+ + + S +V
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL-MHSLAEEV 585
Query: 364 FSGSGNAIPNSMVDAVLKSLTSV----GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLG 419
+SG I V +LK+L V + E + E+++ G+ + + G
Sbjct: 586 YSG---VIEPRAV--LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 420 AVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAG 479
+AN ++ ++ G ++SL+ H + + K+ + +E++ K
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDII 700
Query: 480 AFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGL 539
+++++I +YC R DA +I E+ + + P TY + A F +A+ V
Sbjct: 701 SYNTVIYAYCRNTRMRDASRIFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 540 MKTHGFPP 547
M HG P
Sbjct: 760 MIKHGCRP 767
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 159/427 (37%), Gaps = 65/427 (15%)
Query: 176 EKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVV 235
E ++ +V+ +++ F S +RV ++ + G + + + +LNV S +V
Sbjct: 54 ELRSIDREVISVRSRF----LESANHSASRVLVTLQLDESGFNSKSVLDELNVRVSGLLV 109
Query: 236 KLVLESLGSEPSK---------ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFW 286
+ VL + S A FF W E +H +Y+ + ++ W
Sbjct: 110 REVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMW 169
Query: 287 KLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKV 346
+LV +M GF TF ++ + + K AV + + +P +L +
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSL 229
Query: 347 VTCKEL---------------------------------DMDLFSRVVKVFSGSGNAIPN 373
+ K+ MD F R+ + G + P+
Sbjct: 230 LGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFS-PD 288
Query: 374 SMVDAVLKSLTSVGRIGEWNK------VLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
S +L + +G+ NK L M++ G S + + L G E
Sbjct: 289 SYTYNILLHI-----LGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
F++ + AG D + ++ G+ V+G LDKA + F+EM K + ++S+I
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Query: 488 YCNMNRAIDAYKILCELVKEKELK---PRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
C +A C L+KE E + P Y LVS L G ++A V M G
Sbjct: 404 LCMAGEFREA----CWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 545 FPPFIDP 551
+ P
Sbjct: 460 HYVHLVP 466
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 130/341 (38%), Gaps = 42/341 (12%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+ TYN + R + L+G M G+E +I T +L FC I DAV L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ + KP VT L LF + N +AV
Sbjct: 171 VDQMVEMGYKP----------DTVTFTTLIHGLF-------------LHNKASEAV---- 203
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
++ M G + L G+ + A +N++EAA +++
Sbjct: 204 ----------ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV 253
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
I+ +++ C + D AL+ F EM K + SLIS CN R DA ++L +
Sbjct: 254 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGD 563
++ E+++ P T+ L+ + +G A ++ M P I + I+ D
Sbjct: 314 MI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 564 ---DAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEAQ 600
+A Q L M K P+ Y + F K +R ++
Sbjct: 373 RLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 157/393 (39%), Gaps = 49/393 (12%)
Query: 177 KNGLEGDVVRLKALFDK-NNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVV 235
K G E D+V L +L + + N + A V ++V E K V F++ +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV---------EMGYKPDTVTFTTLIH 191
Query: 236 KLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGA 295
L L + SE + ALI R V+ C+ D TY A+ + + D L+ M A
Sbjct: 192 GLFLHNKASE-AVALID-RMVQRG--CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAA 247
Query: 296 GFEMEIETFVKVLGRFCKRRMIKDAVELY-EFAMAGADKPTPQCCTFLLKKVVTC----- 349
E + + V+ CK R DA+ L+ E G P T+ +++C
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV---RPNVITY--SSLISCLCNYG 302
Query: 350 -----KELDMDLFSRVVKVFSGSGNAIPN-----SMVDAVLKSLTSVGRIGEWNKVLKEM 399
L D+ R + PN +++DA +K V + +++K
Sbjct: 303 RWSDASRLLSDMIERKIN---------PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 400 EDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNL 459
D ++ + L +GE +Q E + R + + +++L+ G C A +
Sbjct: 354 IDPNIFTYSSLINGFCM-LDRLGEAKQMLELMIRKDCL---PNVVTYNTLINGFCKAKRV 409
Query: 460 DKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKL 519
DK ++ F+EM ++ + + +LI + +A + ++V + P TY +
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPNILTYNI 468
Query: 520 LVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF 552
L+ L G A+ VF ++ P I +
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 425 EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
++A R+ AG + D ++SL+ G L++ L F EM+ ++++L
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
+S Y + R +A+KIL E + L P DTY +L+ L G +A+ +F +K+
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRV 184
Query: 545 FPPFI--DPFIRHISKR---GSGDDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEA 599
P + + I + K GS D ++ L Y P+ Y M + +FK +R E+
Sbjct: 185 KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYT--PNAVTYTTMLKMYFKTKRIEKG 242
Query: 600 QNFLSK 605
K
Sbjct: 243 LQLFLK 248
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 127/345 (36%), Gaps = 46/345 (13%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
+D +YN + R + ++G M G+E +I T +L +C + I +AV L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 324 YE--FAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
+ F M + P TF + ++
Sbjct: 173 VDQMFVM----EYQPNTVTF-----------------------------------NTLIH 193
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
L + E ++ M G + L G+ + A + ++E ++
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKIL 501
D I+ +++ C N++ AL+ F EM K ++SLI CN R DA ++L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 502 CELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISK 558
+++ E+++ P T+ L+ + +G +A ++ M P I I
Sbjct: 314 SDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 559 RGSGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEAQNF 602
D+A M K FP+ Y + + F K +R EE
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 10/302 (3%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
AL F ++ G+ + + TYN++ R + +L+ DM + TF ++
Sbjct: 274 ALNLFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSG 366
F K + +A +LY+ + + P + L+ LD +F ++
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI----- 387
Query: 367 SGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKE 425
S + PN + + ++K R+ E ++ +EM G V + + + L G+ +
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 426 QANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLI 485
A + ++ + G D + L+ G C G L+KAL F+ + K + ++ +I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 486 SSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
C + D + + C L K +KP Y ++S +G +A +F MK G
Sbjct: 508 EGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 546 PP 547
P
Sbjct: 567 LP 568
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 139/339 (41%), Gaps = 13/339 (3%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
T+N + + + L+ M G + ++ T+ V+ CKR I A+ L +
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLT 384
G + T ++ + K ++ ++LF+ + + PN + +++++ L
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-----DNKGIRPNVVTYNSLIRCLC 301
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
+ GR + +++L +M + + S + G+ +A + + + D D
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
+ SL+ G C+ LD+A F+ M+ K+ +++LI +C R + ++ E+
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 505 VKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGS 561
++ L TY L+ L G A +F M + G PP I + + + K G
Sbjct: 422 -SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 562 GDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
+ A+ + K P Y M E K + E+
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/360 (19%), Positives = 142/360 (39%), Gaps = 34/360 (9%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
C+ D TY M R +GR D L +M G + + + ++ K +M+ A+
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTCKEL--------------DMDLFSRVVKVFSGS 367
+++ + +P + LL +V +L ++S +V+ S
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 368 GN------------AIP----NSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQ 411
G+ + P ++L+SL G+ E ++L ++ + G V
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 412 SEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVK 471
+ + LG + + ++ +++ G D ++ L+ G +D+A++ F+E+ +
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 472 KEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFT 531
+ +++SLI+ N +D + + ++EK L P TY L+
Sbjct: 506 SDCKPDIISYNSLINC-LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 532 DALNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLRMFE 588
A ++F M G P I + + + K G +AV S M + S+ + E
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLE 624
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
A + V+++E G D I+++++ G C G ++ A++ F M + + A ++SL++
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFP 546
C R DA +++ ++V +++ P T+ ++ + +G F++A+ ++ M
Sbjct: 218 GLCCSGRWSDAARLMRDMVM-RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 547 PFI---DPFIRHISKRGSGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEAQNF 602
P + + I + G D+A Q L M K P Y + F K +R +E
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 603 L 603
Sbjct: 337 F 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 149/387 (38%), Gaps = 46/387 (11%)
Query: 252 FFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRF 311
F +E G+ HD +YN + + R +VG M G+E ++ T ++ F
Sbjct: 91 LFHHMEVCGI-GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGF 149
Query: 312 CKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCK----ELDMDLFSRVVKVFSGS 367
C+ + DA++L +P ++ +CK ++LF R+ + +
Sbjct: 150 CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG--SCKIGLVNDAVELFDRMERDGVRA 207
Query: 368 GNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
NS+V L GR + +++++M V + + + G+ +A
Sbjct: 208 DAVTYNSLV----AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
+ + D D ++SL+ G C+ G +D+A MV K + +++LI+
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 488 YCNMNRAIDAYKILCELVKE-------------------------KELKPRHD------T 516
+C R + K+ E+ + +E+ R D T
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT 383
Query: 517 YKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMT 573
Y +L+ L AL +F M+ I + I + K G+ +DA +++
Sbjct: 384 YSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLS 443
Query: 574 YKKF-PSTSVYLRMFEAFFKKRRPEEA 599
K P Y M F +KR+ +++
Sbjct: 444 CKGLKPDVVSYTTMISGFCRKRQWDKS 470
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 422 GEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAF 481
G+ ++A F+ ++ G ++D ++ SL+ G C G LD+ F E++++ A +
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 482 DSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMK 541
++LI +C + + +A +I E + E+ ++P TY L+ L G +AL + LM
Sbjct: 286 NTLIRGFCKLGQLKEASEIF-EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 542 THGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPE 597
P + I + K G DAV+ + M ++ P Y + K +
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 598 EAQNFL 603
EA L
Sbjct: 405 EASKLL 410
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 423 EKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGI-SYAGAF 481
E E+A E N ++ +G W L+ C AG +D+A+ KEM K G+ + +
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM-KFMGLEADLVVY 250
Query: 482 DSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMK 541
SLI +C+ +D K L + V E+ P TY L+ G +A +F M
Sbjct: 251 TSLIRGFCDCGE-LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 542 THGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYK 575
G P + + I + G +A+Q L+ M K
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 43/308 (13%)
Query: 245 EPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETF 304
E KA+ R + + L D +YN + R +++ +L +M+G+G + T+
Sbjct: 157 ECGKAVSLLREMRRNSL-MPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTW 215
Query: 305 VKVLGRFCKRRMIKDAVE-LYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
++ FCK + +A+ L E G + T L++ C ELD
Sbjct: 216 GILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV-VYTSLIRGFCDCGELD---------- 264
Query: 364 FSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGE 423
G A + D VL+ S I +N +++ G+ +LG + E
Sbjct: 265 ---RGKA----LFDEVLERGDSPCAI-TYNTLIR-----GFC-----------KLGQLKE 300
Query: 424 KEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDS 483
+ EF+ IE G + + L+ G C G +AL M++K+ A ++
Sbjct: 301 ASEIFEFM--IER-GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 484 LISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTH 543
+I+ C DA +I+ EL+K++ +P + TY +L+ L A+G +A + LM
Sbjct: 358 IINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
Query: 544 GFPPFIDP 551
+ DP
Sbjct: 417 --SSYTDP 422
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 144/393 (36%), Gaps = 59/393 (15%)
Query: 220 EREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGRE 279
E+ I ++ F + L SL +P AL F W+ KH+ +Y ++ ++ +
Sbjct: 14 EQSISKISYPFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQ 73
Query: 280 DTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCC 339
+ K+ M + + FV FC+ D+ E+ K TP+C
Sbjct: 74 EIPYEVPKITILMIKSCNSVRDALFVV---DFCRTMRKGDSFEI-------KYKLTPKC- 122
Query: 340 TFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEM 399
+ +L SL G + E ++ EM
Sbjct: 123 ------------------------------------YNNLLSSLARFGLVEEMKRLYTEM 146
Query: 400 -EDCGY--VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVA 456
ED + + N +LG V E A ++V + AG D D + S + GHC
Sbjct: 147 LEDLVSPDIYTFNTLVNGYCKLGYVVE---AKQYVTWLIQAGCDPDYFTYTSFITGHCRR 203
Query: 457 GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDT 516
+D A FKEM + ++ LI + +A +L ++ K+ P T
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCPNVRT 262
Query: 517 YKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMT 573
Y +L+ L G ++A+N+F M G P I+ + D+A L M
Sbjct: 263 YTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHML 322
Query: 574 YKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
P+ Y + + F KK +A LSK
Sbjct: 323 ENGLMPNVITYNALIKGFCKKNV-HKAMGLLSK 354
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 8/286 (2%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
D TYN +A+ I W+++ DM G ++ T+ +L C+ I + L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 325 EFAMA-GADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
+ ++ G + + C+ +L + +D + LF+++ K S + + S+V +
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIV---IH 406
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
L +G+ + EM D + ++ + L G +A ++ + ++G
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKIL 501
D +++ ++ G+ +G +++AL+ FK +++ F+SLI YC +A KIL
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 502 CELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+++K L P +Y L+ G + MK G PP
Sbjct: 527 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/486 (18%), Positives = 190/486 (39%), Gaps = 25/486 (5%)
Query: 129 SSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLE------- 181
+S+ Y +++ A +DE V MK +G +S + F K G
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 182 GDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLES 241
+ R+ + + + + C + R ++E E D + ++ +
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY--T 460
Query: 242 LGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEI 301
+ ++ K L+ F+ ++E G TY + + + I + ++ M+ G + +
Sbjct: 461 MVADEKKGLVVFKRLKECGFTP-TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNL 519
Query: 302 ETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVT--CKELDMDLFSR 359
+T+ ++ F K + +A ++E + KP L +++ C +MD +
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD----VILYNNIISAFCGMGNMDRAIQ 575
Query: 360 VVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLG 419
VK + ++ G + +V M CG V + + + + L
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV 635
Query: 420 AVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-A 478
+ E+A E ++ + AG +++ + ++ G+ G+ KA + F + + EG+
Sbjct: 636 EKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL-QNEGLDVDI 694
Query: 479 GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHD-TYKLLVSKLLAQGGFTDALNVF 537
+++L+ + C R A + E+ PR+ Y +L+ +G +A ++
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARN--IPRNSFVYNILIDGWARRGDVWEAADLI 752
Query: 538 GLMKTHGFPPFIDP---FIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKK 593
MK G P I FI SK G + A Q + M P+ Y + + + +
Sbjct: 753 QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARA 812
Query: 594 RRPEEA 599
PE+A
Sbjct: 813 SLPEKA 818
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 153/397 (38%), Gaps = 25/397 (6%)
Query: 228 VGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWK 287
V F ++ + L+ +KA RWVEE + D N + RE + +
Sbjct: 229 VEFHGRILTVKLDDGKRLKTKAEQRVRWVEEG---EEDTKMSNKSSWHQEREGSRKSLQR 285
Query: 288 LVGDMRGAGFEMEIETFVKV----------LGRFCKRRM-IKDAVELYEFAMAGADKPTP 336
++ D G ++ I F K+ + +F RR + A E +E A PT
Sbjct: 286 IL-DTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTS 344
Query: 337 QCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVL 396
+ T L+ + DMD V+ G + ++ + G +
Sbjct: 345 RIYTSLIHAYAVGR--DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 397 KEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVA 456
E + +A+ +I + E+A V +E G D+ I+ +++ G+ +
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462
Query: 457 GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDT 516
+ K L FK + + + LI+ Y + + A ++ ++KE+ +K T
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNLKT 521
Query: 517 YKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMT 573
Y ++++ + + +A VF M G P + I G+ D A+Q + M
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 574 -YKKFPSTSVYLRMFEAFFKK---RRPEEAQNFLSKC 606
+ P+T ++ + + K RR E + + +C
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 145/363 (39%), Gaps = 26/363 (7%)
Query: 201 KDCARVCRIVRNNVWGD-DVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEES 259
++ RVC+++ D ++E + ++ + S +++ VLE A FF W E
Sbjct: 129 EEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAER 188
Query: 260 GLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKD 319
H TYN+M ++ + + ++ +M G + +ETF + F + K
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKK 247
Query: 320 AVELYEFAMAGADK---PTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV 376
AV ++E K T C L + KE + LF ++ + F+ PN M
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQV-LFDKLKERFT------PNMMT 300
Query: 377 DAVL-------KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
VL ++L RI WN +M D G + + L +K A +
Sbjct: 301 YTVLLNGWCRVRNLIEAARI--WN----DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
+ +++ G + + ++ C +++ A++ F +MV A + LI+ +
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ Y++L E+ +EK P TY L+ + Q ++ M + P I
Sbjct: 415 TQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSI 473
Query: 550 DPF 552
F
Sbjct: 474 HTF 476
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/482 (19%), Positives = 190/482 (39%), Gaps = 13/482 (2%)
Query: 100 IAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMKRK 159
+ ++K + P A F + + + +Y +++ LG G + E++ M+
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 160 -GYGVSRGVKERALECFEKNGLEGDVVRLKALFDKNNCNSVEKDCARVCRIVRNNVWGDD 218
G + GV A++ + + G + V + D +C + ++ ++ + D
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 219 VER-EIKDLNVGFSSEVVKLVLESLG----SEPSKALIFFRWVEESGLCKHDGCTYNAMA 273
+ ++ + G + +V + S P AL + G C+ + Y +
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMNVVAYCTVV 188
Query: 274 RVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADK 333
E+ ++L G M +G + + TF K+L CK+ +K+ +L + +
Sbjct: 189 GGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG-- 246
Query: 334 PTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWN 393
P T+ L C+ ++D R+V G + ++ L + E
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 394 KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGH 453
L +M + G + + + G + A V G DQ + SL+ G
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366
Query: 454 CVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPR 513
C G ++AL F E + K +++LI N ++A ++ E+ EK L P
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLIPE 425
Query: 514 HDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLS 570
T+ +LV+ L G +DA + +M + G+ P I F I S + ++A++ L
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 571 AM 572
M
Sbjct: 486 VM 487
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 132/344 (38%), Gaps = 8/344 (2%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
D TYN + + + ++VGD GF + T+ ++ C A+ L+
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLT 384
A+ KP L+K + + + + ++ +++ S G + ++ L
Sbjct: 380 NEALGKGIKPNVILYNTLIKGL-SNQGMILEA-AQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQE 444
+G + + + ++K M GY + + + E A E ++ + G D D
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCEL 504
++SL+ G C + ++++K MV+K F+ L+ S C + +A +L E+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 505 VKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLM----KTHGFPPFIDPFIRHISKRG 560
K K + P T+ L+ G A +F M K P + I +++
Sbjct: 558 -KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 561 SGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
+ A + M + P Y M + F K FL
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFL 660
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 125/286 (43%), Gaps = 8/286 (2%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
D TYN +A+ I W+++ DM G ++ T+ +L C+ I + L
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 325 EFAMA-GADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
+ ++ G + + C+ +L + +D + LF+++ K S + + S+V +
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIV---IH 406
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
L +G+ + EM D + ++ + L G +A ++ + ++G
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKIL 501
D +++ ++ G+ +G +++AL+ FK +++ F+SLI YC +A KIL
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 502 CELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+++K L P +Y L+ G + MK G PP
Sbjct: 527 -DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 146/338 (43%), Gaps = 21/338 (6%)
Query: 230 FSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLV 289
+ + V L ++ KAL FF WVE +H T+N + ++G+ + W L+
Sbjct: 45 YDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALI 104
Query: 290 GDMRGAGFEMEIE-TFVKVLGRFCKRRMIKDAVELYE----FAMAGAD---KPTPQCCTF 341
M G + TF V R+ ++++A++ Y+ F + C
Sbjct: 105 NRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEH 164
Query: 342 LLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEME 400
K VV +EL F + V G+G ++ N+ + + +L+ + +G G+ + K+M+
Sbjct: 165 --KHVVEAEEL---CFGKNV---IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 401 DCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLD 460
G S + G+ +A + +++ D +++++ + ++
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVE 276
Query: 461 KALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLL 520
+ F+EM ++ +++I C R DAY++L E+ K + +P TY L
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK-RGCQPDSITYMCL 335
Query: 521 VSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISK 558
S+L ++ L++FG M G P +D ++ + K
Sbjct: 336 FSRLEKP---SEILSLFGRMIRSGVRPKMDTYVMLMRK 370
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 175/467 (37%), Gaps = 75/467 (16%)
Query: 68 IIADLFSKPAADPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEM 127
I++ LF D + L N +N + KL+++P + RF+ +
Sbjct: 44 IVSTLFVYRVPDSDLCFCYLSKN---LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIR 100
Query: 128 LSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECF-EKNGLEGDVVR 186
S +YN + R+L GL D +M MK G + + + F EK L
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 187 LKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEP 246
L F+ C C V ++ V D VE + +KL E L +
Sbjct: 161 LLQSFEVEGC------CMVVNSLLNTLVKLDRVE------------DAMKLFDEHLRFQS 202
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
+D T+N + R + ++ +L+G M G G E +I T+
Sbjct: 203 C----------------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG 366
++ FCK + A E+++ +G+ +P T+
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGS-VCSPDVVTY------------------------- 280
Query: 367 SGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
SM+ K+ G++ E + +L +M G + + + GE
Sbjct: 281 ------TSMISGYCKA----GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
A E ++ + G D + SL+ G+C G + + ++EM + A + LI+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDA 533
+ CN NR + A ++L +L K++ P+ Y ++ G +A
Sbjct: 391 ALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEA 436
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 175/467 (37%), Gaps = 75/467 (16%)
Query: 68 IIADLFSKPAADPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEM 127
I++ LF D + L N +N + KL+++P + RF+ +
Sbjct: 44 IVSTLFVYRVPDSDLCFCYLSKN---LNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIR 100
Query: 128 LSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECF-EKNGLEGDVVR 186
S +YN + R+L GL D +M MK G + + + F EK L
Sbjct: 101 HSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATAL 160
Query: 187 LKALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEP 246
L F+ C C V ++ V D VE + +KL E L +
Sbjct: 161 LLQSFEVEGC------CMVVNSLLNTLVKLDRVE------------DAMKLFDEHLRFQS 202
Query: 247 SKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVK 306
+D T+N + R + ++ +L+G M G G E +I T+
Sbjct: 203 C----------------NDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 307 VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSG 366
++ FCK + A E+++ +G+ +P T+
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGS-VCSPDVVTY------------------------- 280
Query: 367 SGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
SM+ K+ G++ E + +L +M G + + + GE
Sbjct: 281 ------TSMISGYCKA----GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
A E ++ + G D + SL+ G+C G + + ++EM + A + LI+
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDA 533
+ CN NR + A ++L +L K++ P+ Y ++ G +A
Sbjct: 391 ALCNENRLLKARELLGQLA-SKDIIPQPFMYNPVIDGFCKAGKVNEA 436
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/465 (19%), Positives = 180/465 (38%), Gaps = 54/465 (11%)
Query: 215 WGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMAR 274
W E ++++L V VL S E AL FF W + +HD Y +M
Sbjct: 157 WNPKHEGQMRNLLRSLKPSQVCAVLRSQDDE-RVALKFFYWADRQWRYRHDPMVYYSMLE 215
Query: 275 VIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKP 334
V+ + +++ M+ G E F +V+ + + ++DA+++ +P
Sbjct: 216 VLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP 275
Query: 335 TPQCCTFLLKKVVTCKELDMDL-FSRVVKVFSGSGNAIP-NSMVDA------------VL 380
C + V L+ L F ++V N + N M+ +L
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 381 KSLTSVG-------------------RIGEWNKVLKEM-EDCGYVASANWQSEIAFRLGA 420
+ + S G RI E ++K+M ++ G V + + L
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 421 VGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKK-----EGI 475
++A F+ + G D+ + ++V C G + +A D EM+ K + +
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 476 SYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALN 535
+Y ++++ +C + +D K L +++ KP +Y L++ + G +A
Sbjct: 456 TYT----AVVNGFCRLGE-VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE 510
Query: 536 VFGLMKTHGFPP--FIDPFIRH-ISKRGSGDDAVQFLSAMTYKKFPSTSVYLR-MFEAFF 591
+ + + H + P I H + + G +A + M K F V + + ++
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 592 KKRRPEEAQNFLSKCPRY-----IRNHADVLNLFCSMNSKEASSS 631
+ R EA+ F+ +C + N V++ FC + +A+ S
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 16/310 (5%)
Query: 283 DRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFL 342
D F L + G G + + ++L CK +K A+ + E ++ P T+L
Sbjct: 89 DSFSHLESLVTG-GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYL 147
Query: 343 LKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDC 402
+ ++ CK ++ ++V+ G +A+++ L +G + + + ++ +
Sbjct: 148 VNQL--CKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 403 GYVASANWQSEIAFRLGAVGEK---EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNL 459
G +A S F L A ++ ++A + ++ I G + + ++ L+ G C G
Sbjct: 206 GLAPNAFTYS---FLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 460 DKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKL 519
D A+ F+E+ K + +++ L+ C R +A +L E+ + P TY +
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM-DGGDRAPSVVTYNI 321
Query: 520 LVSKLLAQGGFTDALNVFGLMK--THGF---PPFIDPFIRHISKRGSGDDAVQFLSAMTY 574
L++ L G AL V M H F +P I + K G D V+ L M Y
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 575 KKF-PSTSVY 583
++ P+ Y
Sbjct: 382 RRCKPNEGTY 391
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 127/339 (37%), Gaps = 10/339 (2%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
TYNA+ R + ++++ + V + G T+ +L K R +AV+L +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVG 387
+ +P LL CKE D + + G + +L+ L G
Sbjct: 238 IVKGGEPNLVSYNVLLTGF--CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDG 295
Query: 388 RIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSD--SDQEI 445
R E N +L EM+ S + + L G EQA + + +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 446 WDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELV 505
++ ++ C G +D + EM+ + G +++ I S C N + + + +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSL 414
Query: 506 KEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSG 562
K+ HD YK +++ L +G A + M GF P IR + G
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 563 DDAVQFLSAMTYKKF--PSTSVYLRMFEAFFKKRRPEEA 599
A++ LS M + P+ + M K RR + A
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLA 513
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 355 DLFSRVVKVFSGSGNAIPN-SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSE 413
D FS + + +G PN + +L L R+ + +V++ M G + A+ +
Sbjct: 89 DSFSHLESLVTGGHK--PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 414 IAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKE 473
+ +L G A + V ++E G S+ +++LV G C+ G+L+++L + +++K
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 474 GISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDA 533
A + L+ + +A K+L E++ K +P +Y +L++ +G DA
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV-KGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 534 LNVFGLMKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMT-YKKFPSTSVYLRMFEA 589
+ +F + GF + + +R + G ++A L+ M + PS Y + +
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 590 FFKKRRPEEAQNFL 603
R E+A L
Sbjct: 326 LAFHGRTEQALQVL 339
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 112/510 (21%), Positives = 213/510 (41%), Gaps = 88/510 (17%)
Query: 98 AVIAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYNAMLRALGANGLVDEFWEMVSVMK 157
AVI+ K+ PE+A FF +++ + + +Y ++ AL G VDE ++V ++
Sbjct: 176 AVISGFCKI-GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 158 RKGY------------GVSRG-------VKERALECFEKNGLEGDVVRLKALFDK-NNCN 197
+G+ G +G +++R E EK G+ DVV L D +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDR--EMVEK-GMNRDVVSYSILIDGLSKEG 291
Query: 198 SVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVE 257
+VE+ + ++++ V + N+ + +++ + + + +A + F +
Sbjct: 292 NVEEALGLLGKMIKEGV----------EPNLITYTAIIRGLCKM--GKLEEAFVLFNRIL 339
Query: 258 ESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMI 317
G+ + D Y + I R+ ++R + ++GDM G + I T+ V+ C
Sbjct: 340 SVGI-EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC----- 393
Query: 318 KDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVD 377
MAG + ++ V+T L +D + +V + D
Sbjct: 394 ----------MAGRVSEADEVSKGVVGDVITYSTL-LDSYIKVQNI-------------D 429
Query: 378 AVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAA 437
AVL+ + R K+ ++ C + A +GA GE A+ +
Sbjct: 430 AVLE----IRRRFLEAKIPMDLVMCNILLKA------FLLMGAYGE---ADALYRAMPEM 476
Query: 438 GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDA 497
D + +++ G+C G +++AL+ F E+ +K +S A ++ +I + C A
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTA 535
Query: 498 YKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALN-VFGL--MKTHGFPPFIDPFIR 554
++L EL EK L T + L+ + A GG L V+GL + + ++ I
Sbjct: 536 TEVLIEL-WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAIL 594
Query: 555 HISKRGSGDDAVQFLSAMTYK----KFPST 580
+ KRGS + A++ M K FPST
Sbjct: 595 LLCKRGSFEAAIEVYMIMRRKGLTVTFPST 624
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 24/259 (9%)
Query: 303 TFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVT--CK----ELDMDL 356
TF ++ RF ++ + +A+E+ E M + P F+ V++ CK EL +
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEM-MTNKNVNYP-FDNFVCSAVISGFCKIGKPELALGF 193
Query: 357 FSRVVKVFSGSGNAIPNSMVDAVLKS-LTSVGRIGEWNKVLKEMEDCGY----VASANWQ 411
F V SG +PN + L S L +G++ E +++ +ED G+ V +NW
Sbjct: 194 FESAVD----SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 412 SEIAFRLGA-VGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMV 470
F+ GA V Q E V + G + D + L+ G GN+++AL +M+
Sbjct: 250 HG-YFKGGALVDALMQDREMVEK----GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 471 KKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGF 530
K+ + ++I C M + +A+ +L + ++ Y L+ + +G
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAF-VLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 531 TDALNVFGLMKTHGFPPFI 549
A ++ G M+ G P I
Sbjct: 364 NRAFSMLGDMEQRGIQPSI 382
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 10/253 (3%)
Query: 352 LDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQ 411
L + + +++K+ G NS+++ RI E ++ +M + GY
Sbjct: 128 LALAILGKMMKLGYGPSIVTLNSLLNGFCHG----NRISEAVALVDQMVEMGYQPDTVTF 183
Query: 412 SEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVK 471
+ + L + +A V R+ G D + +++ G C G D AL+ +M K
Sbjct: 184 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 243
Query: 472 KEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFT 531
+ + ++++I C DA+ + ++ + K +KP TY L+S L G ++
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 532 DALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKK--FPSTSVYLRM 586
DA + M P F + I K G +A + M K FP Y +
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 587 FEAFFKKRRPEEA 599
+ F K +R EE
Sbjct: 363 IKGFCKYKRVEEG 375
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 124/324 (38%), Gaps = 43/324 (13%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
C+ D TY A+ + + D L+ M E ++ + ++ CK + + DA
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTC-------------------KELDMDL--FSRV 360
+L+ KP F +++C K ++ DL F+ +
Sbjct: 271 DLFNKMETKGIKPD----VFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 361 VKVFSGSGNAIP-----NSMV------------DAVLKSLTSVGRIGEWNKVLKEMEDCG 403
+ F G + + MV + ++K R+ E +V +EM G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 404 YVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKAL 463
V + + + + + A ++ + G D ++ L+ G C GN++ AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 464 DSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSK 523
F+ M K++ + ++I + C + D + + C L K +KP TY ++S
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSG 505
Query: 524 LLAQGGFTDALNVFGLMKTHGFPP 547
+G +A +F MK G P
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLP 529
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 126/324 (38%), Gaps = 11/324 (3%)
Query: 263 KHDGCTYNAMARVIGREDTIDR-----FWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMI 317
K DG YN + + E ++ KL +MR G E ++ + ++ C++ +
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 318 KDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVD 377
K A L++ P+ L+ V CK +M ++ G I + +
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGV--CKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 378 AVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAA 437
++ G + E + + ME G+ A + IA + ++A +++ R+
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 438 GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDA 497
G + +L+ +C GN+++A F EM K A ++ +I +YC + +A
Sbjct: 464 GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEA 523
Query: 498 YKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIR 554
K+ + + + P TY L+ +A+ +F M G I
Sbjct: 524 RKLRANM-EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 555 HISKRGSGDDAVQFLSAMTYKKFP 578
+SK G D+A M K +
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYT 606
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 28/265 (10%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+A + F + E GL TY A+ + + + L+ +M+ G + F +
Sbjct: 347 RAFLLFDELTEKGLSPS-SYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 308 LGRFCKRRMIKDAVELYE-FAMAGADKPTPQC-----CTFLLKKVVTCKELDMDLFSRVV 361
+ +C++ M+ +A +Y+ G C C LK+ K+ + V
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 362 KVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAV 421
K+ + S +++D K G + E ++ EM G +A + + +
Sbjct: 466 KLSTVS----YTNLIDVYCKE----GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Query: 422 GEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM------------ 469
G+ ++A + +EA G D D + SL+ G C+A N+D+A+ F EM
Sbjct: 518 GKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 470 -VKKEGISYAGAFDSLISSYCNMNR 493
V G+S AG D Y M R
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKR 602
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 148/366 (40%), Gaps = 20/366 (5%)
Query: 287 KLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKV 346
KLV DMR G ++ TF ++G +C+ R ++ A ++++ +P + L+
Sbjct: 183 KLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGF 242
Query: 347 VTCKELDMDLFSRVVK-VFSGSGNAIPNSMVDAVLKSLT-SVGRIGEWNKVLKEMEDCGY 404
+ K D++ +++K ++ N SM A +L S+ R G +N + + E+
Sbjct: 243 L--KMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSL 300
Query: 405 VASANWQSEIAFRLGAVGEKEQ---ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDK 461
S N + + ++ + A V +++ G + +++++ G C G +
Sbjct: 301 CESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMR 360
Query: 462 ALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLV 521
A +E + E + L+ S C A +L EL+ KE R Y + +
Sbjct: 361 AYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVL-ELMLRKEGADRTRIYNIYL 419
Query: 522 SKLLAQGGFTDALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKF- 577
L T+ LNV M P ++ I + K G DDA++ L M KF
Sbjct: 420 RGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC 479
Query: 578 -PSTSVYLRMFEAFFKKRRPEEAQNFLSKC-------PRYIRNHADVLNLFCSMNSKEAS 629
P + + R EEA + L++ P + +A + LF EA
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 630 SSSGML 635
S G L
Sbjct: 540 SVFGQL 545
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 134/351 (38%), Gaps = 63/351 (17%)
Query: 221 REIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEE--SGLCKHDGCTYNAMARVIGR 278
R + ++ S VV +L +PSK L FFRW G KH Y+ + R + R
Sbjct: 46 RSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGY-KHSATAYSQIFRTVCR 104
Query: 279 EDTIDRFWKLVGDMRGAGFEMEIETFVKV-LGRFCKRRMIKDAVELYEFAMAGADKPTPQ 337
+ L+G M+ G ++ +T K+ L + + A+ + ++ D P
Sbjct: 105 TGLLGEVPDLLGSMKEDGVNLD-QTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPS 163
Query: 338 CCTFLLKKVVTCKELDMDLFSRVVKVFSGSGN-------------AIPNSM-VDAVLKSL 383
+L +V EL + L S + K+ S N +P ++ V+ +L L
Sbjct: 164 VYDSVLIALVKKHELRLAL-SILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGL 222
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
E+ +V ++++ W I
Sbjct: 223 RRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIH-------------------------- 256
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAF-------DSLISSYCNMNRAID 496
G G+LD AL FKEM ++ + Y +F +SLI C +A D
Sbjct: 257 --------GFGCWGDLDAALSLFKEMKERSSV-YGSSFGPDICTYNSLIHVLCLFGKAKD 307
Query: 497 AYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
A + EL K +P + TY++L+ DA+ ++G M+ +GF P
Sbjct: 308 ALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVP 357
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 117/270 (43%), Gaps = 11/270 (4%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
T+N + + + + ++ ++ +M+ GF + TF + + + A+ +YE A
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG----NAIPNSMVDAVLKSL 383
+ K C+ LL + CKE ++ ++ G I N+M+D +
Sbjct: 346 VDSGVKMNAYTCSILLNAL--CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
VG ++ ME G + + R +GE E A + VN+++ G
Sbjct: 404 DLVG----ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSV 459
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
E ++ L+ G+ DK D KEM + ++ +LI+ C ++ ++A +I+
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKR 518
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDA 533
++++ + P+ Y +L+ ++G DA
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDA 548
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 120/313 (38%), Gaps = 25/313 (7%)
Query: 248 KALIFFRWV---EESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETF 304
+A+ F W+ SG K D R++GRE KL+ + + +++ +
Sbjct: 154 RAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAY 213
Query: 305 VKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSR----- 359
+L + + + A++L+E P+P T+ + +D+F +
Sbjct: 214 TTILHAYSRTGKYEKAIDLFERMKEMG--PSPTLVTY---------NVILDVFGKMGRSW 262
Query: 360 -----VVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEI 414
V+ G VL + G + E + E++ CGY + +
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 415 AFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEG 474
G G +A + +E +D ++ LV + AG +A + M KK
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 475 ISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDAL 534
+ A + ++I +Y + +A K+ + KE P TY ++S L + + +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 535 NVFGLMKTHGFPP 547
+ MK++G P
Sbjct: 442 KMLCDMKSNGCSP 454
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/457 (21%), Positives = 186/457 (40%), Gaps = 30/457 (6%)
Query: 134 NAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRLKALFDK 193
+ +L A GL+ E E + +K GY L+ F K G+ + + + ++
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 194 NNC--NSVEKD--CARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLG--SEPS 247
N+C +SV + A R + +E K V ++ V+++ G +
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK-GVMPNAITYTTVIDAYGKAGKED 403
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+AL F ++E+G C + CTYNA+ ++G++ + K++ DM+ G T+ +
Sbjct: 404 EALKLFYSMKEAG-CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTC-KELDMDLFSRVVKVFSG 366
L + M K ++ + +P L+ C E+D K++
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDAS------KMYGE 516
Query: 367 SGNAIPNSMVDAVLKSLTSVGRIGEW---NKVLKEMEDCGYVASANWQSEIAFRLGAVGE 423
A N+ V L ++ R G+W V+ +M+ G+ + S + G
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 424 KEQANEFVNRIEAAGSDSDQEIWDSLVVGH----CVAGNLDKALDSFKEMVKKEGISYAG 479
NRI+ + +L++ + +AG+ ++A FK+ K +
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS-ERAFTLFKKHGYKPDMV--- 632
Query: 480 AFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGL 539
F+S++S + N A IL E ++E L P TY L+ + +G A +
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGIL-ESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 540 MKTHGFPPFI---DPFIRHISKRGSGDDAVQFLSAMT 573
++ P + + I+ +RG +AV+ LS MT
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 134/364 (36%), Gaps = 7/364 (1%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKV 307
+ +I+F E HD ++ + R + ++G M G+E I TF +
Sbjct: 88 ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147
Query: 308 LGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGS 367
L FC I DA L + +P L+ + CK ++++ ++
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL--CKNGELNIALELLNEMEKK 205
Query: 368 GNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQA 427
G + +L L GR + ++L++M + + G ++A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 428 NEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISS 487
E + + D + ++S++ G C+ G L A +F M K +++LIS
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 488 YCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+C R +D L + + + TY L+ G AL++F M + P
Sbjct: 326 FCKF-RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 548 FIDP---FIRHISKRGSGDDA-VQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFL 603
I + + G + A V+F +K+ Y M K + E+A
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 604 SKCP 607
+ P
Sbjct: 445 CRLP 448
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 151/384 (39%), Gaps = 55/384 (14%)
Query: 266 GCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL-Y 324
GC N + IDRFWK+ +M G+ + TF V+ FCK + +A+ + Y
Sbjct: 191 GCLLNV--------NEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVV-KVFSGSGNAI-PNSMV-DAVLK 381
G P +F + CK DM +++ K+ SGN + PN++ ++V+
Sbjct: 243 RMLKCGV---WPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVIN 299
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
GR+ ++ +M G + + G G ++A + + + G
Sbjct: 300 GFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVV 359
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKK--------EGISYAG-AFDSLISSYCNMN 492
+ I++S+V + G+++ A+ ++M K + I G + +
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 493 RAIDAYK----ILC------ELVKEKELKPRHD---------------TYKLLVSKLLAQ 527
R I K I+C V++K+L ++ L+ L +
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKE 479
Query: 528 GGFTDALNVF-GLMKTHGFPPFI--DPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYL 584
G AL ++ G++K + + + + +SKRG A ++AM K + Y
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT---YN 536
Query: 585 RMFEAFFKKRRPEEAQNFLSKCPR 608
+ K EEA + LSK +
Sbjct: 537 TLLNESLKTGNVEEADDILSKMQK 560
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 137/360 (38%), Gaps = 55/360 (15%)
Query: 252 FFRWVEESGLCKH--------DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIET 303
F RW + L + D T+NA+ +E + KL +M + T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 304 FVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
+ ++ FCK DA +++ +P TF
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTF---------------------- 435
Query: 364 FSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGE 423
N+++D ++ R+ E ++L+E+ G VA+ + + V
Sbjct: 436 ---------NTIIDVYCRA----KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 424 KEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFD 482
A + + + G D + L+ G C L++AL+ F E+++ I A++
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYN 541
Query: 483 SLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKT 542
+I C ++ +A+ + C L ++P TY +++S + +DA +F MK
Sbjct: 542 IIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600
Query: 543 HGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEA 599
+G P + IR K G D +++ +S M F + ++M R +++
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKS 660
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 131/322 (40%), Gaps = 29/322 (9%)
Query: 290 GDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTC 349
G + GF+ ++ TF +L C I +A+ L+ + + T L+ V
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE----------TGFLEAVA-- 212
Query: 350 KELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASAN 409
LF ++V++ N++++ L GR+ E ++ +M G
Sbjct: 213 ------LFDQMVEIGLTPVVITFNTLING----LCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 410 WQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM 469
I + +G+ + A ++++E D I+ +++ C G+ A F EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 470 VKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGG 529
++K ++ +I +C+ R DA ++L +++ E+E+ P T+ L+S + +G
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGK 381
Query: 530 FTDALNVFG-LMKTHGFPPFI--DPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLRM 586
+A + ++ FP + + I K DDA M P + +
Sbjct: 382 LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---PDVVTFNTI 438
Query: 587 FEAFFKKRRPEEAQNFLSKCPR 608
+ + + +R +E L + R
Sbjct: 439 IDVYCRAKRVDEGMQLLREISR 460
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 125/330 (37%), Gaps = 49/330 (14%)
Query: 285 FWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPT--------- 335
W ++ AGF + + F ++ +FCK I DA ++++ + +PT
Sbjct: 224 IWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN 283
Query: 336 ------------------------PQCCTFLLKKVVTCKELDMD----LFSRVVKVFSGS 367
P T+ CKE MD LF + K
Sbjct: 284 GYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK----- 338
Query: 368 GNAIPNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQ 426
IPN ++ ++ + G I + ++M G + + G+
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAG-AFDSLI 485
A V+ + G D+ + +L+ G C G+++ AL+ KEM + GI F +L+
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM-DQNGIELDRVGFSALV 457
Query: 486 SSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
C R IDA + L E+++ +KP TY +++ +G + M++ G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 546 PPFI---DPFIRHISKRGSGDDAVQFLSAM 572
P + + + + K G +A L AM
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAM 546
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 3/289 (1%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
HD T N + + +G M GFE +I TF ++ FC +++A+ +
Sbjct: 105 HDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSL 383
+ KP T ++ + CK ++ + G M +++ L
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSL--CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 384 TSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQ 443
+ GR + + +L+ M + + G+ A E N + +
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
+ SL+ G C+ G +D+A F M K A+ SLI+ +C + DA KI E
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF 552
+ +K L TY L+ G A VF M + G PP I +
Sbjct: 343 M-SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 10/287 (3%)
Query: 263 KHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVE 322
K D T+NA+ +E +L +M I T+ ++ FC + +A +
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQ 303
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVL 380
++ P T L+ CK++D M +F + + +GN I + ++
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYT---TLI 359
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGY---VASANWQSEIAFRLGAVGEKEQANEFVNRIEAA 437
+ VG+ +V M G + + N G V + E + + E
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 438 GSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDA 497
G + ++ L+ G C G L+KAL F++M K+E + +I C + +A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 498 YKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
+ C L K +KP TY ++S L +G +A +F MK G
Sbjct: 480 VNLFCSL-PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 10/261 (3%)
Query: 251 IFFRWVEESGLCK--HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
I R+ E CK + T N + R +D+ +L+ DM GF ++ ++
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
C++ ++ A++L M G P TF C+ + + S+V
Sbjct: 281 AGHCEKGLLSSALKLKN--MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV- 337
Query: 369 NAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDC---GYVASANWQSEIAFRLGAVGEKE 425
N PN++ L + + G+ + ED G + + F L +
Sbjct: 338 NVAPNTVTYNTL--INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 426 QANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLI 485
+A +FV ++ + + +L++G CV N D+ + +K M++ F+ L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 486 SSYCNMNRAIDAYKILCELVK 506
S++C A ++L E+V+
Sbjct: 456 SAFCRNEDFDGASQVLREMVR 476
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 106/261 (40%), Gaps = 10/261 (3%)
Query: 251 IFFRWVEESGLCK--HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
I R+ E CK + T N + R +D+ +L+ DM GF ++ ++
Sbjct: 221 IALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
C++ ++ A++L M G P TF C+ + + S+V
Sbjct: 281 AGHCEKGLLSSALKLKN--MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV- 337
Query: 369 NAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDC---GYVASANWQSEIAFRLGAVGEKE 425
N PN++ L + + G+ + ED G + + F L +
Sbjct: 338 NVAPNTVTYNTL--INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 426 QANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLI 485
+A +FV ++ + + +L++G CV N D+ + +K M++ F+ L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 486 SSYCNMNRAIDAYKILCELVK 506
S++C A ++L E+V+
Sbjct: 456 SAFCRNEDFDGASQVLREMVR 476
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/337 (18%), Positives = 131/337 (38%), Gaps = 11/337 (3%)
Query: 269 YNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAM 328
++ + I + + D L M+ G + T+ ++ FC+R + A+ + M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 329 AGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSV 386
+P LL + + L ++V++ + N+++ + +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH---- 199
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
R E ++ M G + L G+ + A + ++E + I+
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
++++ C N++ AL+ F EM K ++SLI CN R DA ++L +++
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI- 318
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHISKRGSGD 563
E+++ P T+ L+ + +G +A ++ M P I I D
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 564 DAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEA 599
+A M K FP+ Y + + F K +R +E
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 164/421 (38%), Gaps = 51/421 (12%)
Query: 224 KDLNVGFSSEVVKL--VLESL--GSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGRE 279
K + +G+ ++V L +L G+ S A+ + E G + D T+N + + R
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY-QPDSFTFNTLIHGLFRH 199
Query: 280 DTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCC 339
+ LV M G + ++ T+ V+ CKR I A+ L + G +P
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 340 TFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNKVL 396
++ + K ++ ++LF+ + + PN + +++++ L + GR + +++L
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEM-----DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 314
Query: 397 KEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVA 456
+M + + S + G+ +A + + + D D + SL+ G C+
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 457 GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRA---------------------- 494
LD+A F+ M+ K+ +++LI +C R
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 495 ------------IDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKT 542
D +I+ + + + P TY +L+ L G AL VF ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 543 HGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEE 598
P I + I + K G +D +++ K P+ Y M F +K EE
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 599 A 599
A
Sbjct: 555 A 555
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 120/294 (40%), Gaps = 31/294 (10%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
TYN + + ++ +++ +MR G I T+ ++G C+ + +A ++ +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD-- 327
Query: 328 MAGADKPTPQCCTF------------LLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSM 375
+D P T+ L K + C+ DL SR + S+
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR----DLKSR----------GLSPSL 373
Query: 376 V--DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNR 433
V + ++ G K++KEME+ G S + + E+A +
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 434 IEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNR 493
+E G D + L+ G C+ G +++A FK MV+K ++++I YC
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 494 AIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+ A K+L E+ +EKEL P +Y+ ++ L + +A + M G P
Sbjct: 494 SYRALKLLKEM-EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 152/369 (41%), Gaps = 54/369 (14%)
Query: 282 IDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY----EFAMAGADKPTPQ 337
I++ + L+ ++ GF + + ++ CK+ I+ A +L+ + + ++
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 338 CCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPN-SMVDAVLKSLTSVGRIGEWNKVL 396
L K V K+ +++ ++ + PN + V+ L GR + +V
Sbjct: 239 LINGLFKNGV--KKQGFEMYEKMQE-----DGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 397 KEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVA 456
EM + G + + + L + +AN+ V+++++ G + + +++L+ G C
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 457 GNLDKALDSFKEMVKKEGISYA-GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHD 515
G L KAL +++ K G+S + ++ L+S +C A K++ E+ +E+ +KP
Sbjct: 352 GKLGKALSLCRDL-KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EERGIKPSKV 409
Query: 516 TYKLLVSKLLAQGGFTDALNV------FGLMK--------THGF---------------- 545
TY +L+ A+ + GL+ HGF
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 546 --------PPFIDPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRP 596
+ I K GS A++ L M K+ P+ + Y M E K+R+
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 597 EEAQNFLSK 605
+EA+ + K
Sbjct: 530 KEAERLVEK 538
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 5/185 (2%)
Query: 425 EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
++A V+ ++ G + I+++++ G C +L+ AL+ F M KK + A +++L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
IS N R DA ++L ++VK K + P + L+ + +G +A N++ M
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 545 FPPFI---DPFIRHISKRGSGDDAVQFLSAMTYKK-FPSTSVYLRMFEAFFKKRRPEEAQ 600
P + + I G DA M K FP Y + F K +R E+
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 601 NFLSK 605
+
Sbjct: 345 KLFCE 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 113/304 (37%), Gaps = 4/304 (1%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
+ + +E G+ HD ++ + R + L+G M GF I T +L
Sbjct: 98 VIYLYHKMENLGI-SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL 156
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSG 368
FC+ ++AV L + +M G P + CK D++ V G
Sbjct: 157 NGFCQGNRFQEAVSLVD-SMDGFG-FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 369 NAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQAN 428
+ ++ L++ GR + ++L++M + + + + G +A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 429 EFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSY 488
+ + ++SL+ G C+ G L A F MV K +++LI+ +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 489 CNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPF 548
C R D K+ CE+ + L TY L+ G A VF M G P
Sbjct: 335 CKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 549 IDPF 552
I +
Sbjct: 394 IVTY 397
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 47/352 (13%)
Query: 228 VGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWK 287
V S +V +L + AL +W E KH Y+ ++G+ DR +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 288 LVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE-FAMAGADKPTPQCCTFLLKKV 346
V MRG + + T K++ RF ++AV +++ G +K T + LL +
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT-ESMNLLLDTL 200
Query: 347 VTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGE--WN---------- 393
CKE ++ +RVV + + PN+ + + R+ E W
Sbjct: 201 --CKEKRVEQ-ARVV-LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 394 -----------------------KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
++L EME G ++ + I L A E E+A
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYC 489
R++ +G D ++ L+ AG L++A F+ + + G+S ++S+I+ YC
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMK 541
+ + A ++L E+ P TY+ L+ +G D + V L+K
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG---DVVEVGKLLK 425
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 8/279 (2%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
T+N + + ++ + +M+G GF + ++ ++ +C++ E+
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVG 387
A P T ++ + KE + L RV SG + + ++ +L G
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEAL--RVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 388 RIGEWNKVLK-EMEDCGY-VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAG-SDSDQE 444
R+ E +V + EM + G + ++ + S IA E+++A E + +E++ + D
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH-DEEDKAIELLKEMESSNLCNPDVH 402
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYKILCE 503
+ L+ G++ + KEMV K +S + LI C N AY + E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKT 542
++ + ++ PRH T LL+ ++ + A + +MKT
Sbjct: 463 MISQ-DITPRHRTCLLLLEEVKKKNMHESAERIEHIMKT 500
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 140/352 (39%), Gaps = 47/352 (13%)
Query: 228 VGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWK 287
V S +V +L + AL +W E KH Y+ ++G+ DR +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 288 LVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYE-FAMAGADKPTPQCCTFLLKKV 346
V MRG + + T K++ RF ++AV +++ G +K T + LL +
Sbjct: 143 FVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNT-ESMNLLLDTL 200
Query: 347 VTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGE--WN---------- 393
CKE ++ +RVV + + PN+ + + R+ E W
Sbjct: 201 --CKEKRVEQ-ARVV-LLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 394 -----------------------KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
++L EME G ++ + I L A E E+A
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYC 489
R++ +G D ++ L+ AG L++A F+ + + G+S ++S+I+ YC
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMK 541
+ + A ++L E+ P TY+ L+ +G D + V L+K
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG---DVVEVGKLLK 425
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 120/279 (43%), Gaps = 8/279 (2%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
T+N + + ++ + +M+G GF + ++ ++ +C++ E+
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVG 387
A P T ++ + KE + L RV SG + + ++ +L G
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEAL--RVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 388 RIGEWNKVLK-EMEDCGY-VASANWQSEIAFRLGAVGEKEQANEFVNRIEAAG-SDSDQE 444
R+ E +V + EM + G + ++ + S IA E+++A E + +E++ + D
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH-DEEDKAIELLKEMESSNLCNPDVH 402
Query: 445 IWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYKILCE 503
+ L+ G++ + KEMV K +S + LI C N AY + E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKT 542
++ + ++ PRH T LL+ ++ + A + +MKT
Sbjct: 463 MISQ-DITPRHRTCLLLLEEVKKKNMHESAERIEHIMKT 500
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 112/279 (40%), Gaps = 14/279 (5%)
Query: 275 VIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKP 334
++ ++ D +W+ + +++ G ++ F ++ + K M + AVE F
Sbjct: 101 MLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVE--SFGRMKEFDC 158
Query: 335 TPQCCTFLLKKVVTCKE-----LDMDLFSRVVKVFSGSGNAIPNSMVDAVL-KSLTSVGR 388
P T+ + V +E L +++ ++K N PN +L L GR
Sbjct: 159 RPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC-----NCSPNLYTFGILMDGLYKKGR 213
Query: 389 IGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDS 448
+ K+ +M G + + + L G + A + ++ +G+ D ++
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 449 LVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEK 508
L+ G C G + +A + + K + + SLI R A+++ ++K K
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK-K 332
Query: 509 ELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
+KP Y +L+ L G DAL + M + G P
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 11/330 (3%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRF-WKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDA 320
C+ D TYN + RV+ RE+ + + +M + TF ++ K+ DA
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 321 VELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVL 380
++++ P T L+ + C+ D ++ SGN + +A+L
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGL--CQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSD 440
+GR+ E ++L+ E G+V S + L QA E +
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 441 SDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYK 499
D ++ L+ G AG ++ AL M K GIS ++++I + C +
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLLEEGRS 394
Query: 500 ILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHI 556
+ E+ E E P T+ +L+ + G +A +F ++ G P + F I +
Sbjct: 395 LQLEM-SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 557 SKRGSGDDAVQFLSAMTYKKFPSTSVYLRM 586
K G +A L M + S++LR+
Sbjct: 454 CKSGELKEARLLLHKMEVGR--PASLFLRL 481
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 5/185 (2%)
Query: 422 GEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAF 481
G A + + + G ++ + L+ G C G+ D A F EM + A
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 482 DSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMK 541
++L+ +C + R ++A+++L L ++ Y L+ L +T A ++ M
Sbjct: 272 NALLDGFCKLGRMVEAFELL-RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 542 THGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPE 597
P I + I+ +SK G +DA++ LS+M K P T Y + +A + E
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 598 EAQNF 602
E ++
Sbjct: 391 EGRSL 395
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 134/321 (41%), Gaps = 46/321 (14%)
Query: 219 VEREIKDL--NVGFSSEVVK---LVLESLG-SEPSKALIFFRWVEESGLCKHDGCTYNAM 272
V R++K+L GFS ++V L+ L + S AL R + + G+ K + T N +
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI-KMNTITLNTI 457
Query: 273 ARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGAD 332
+ +E +D L+ GF ++ T+ ++ F + ++ A+E+++ M
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWD-EMKKV- 515
Query: 333 KPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEW 392
K TP TF NS++ L G+
Sbjct: 516 KITPTVSTF-------------------------------NSLIGG----LCHHGKTELA 540
Query: 393 NKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVG 452
+ E+ + G + + + I G E+A EF N D + L+ G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 453 HCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKP 512
C G +KAL+ F ++++ + ++++IS++C + +AY +L E+ +EK L+P
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEM-EEKGLEP 658
Query: 513 RHDTYKLLVSKLLAQGGFTDA 533
TY +S L+ G ++
Sbjct: 659 DRFTYNSFISLLMEDGKLSET 679
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 135/320 (42%), Gaps = 44/320 (13%)
Query: 291 DMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCK 350
DM G + ++TF ++ +C ++DA+ + E M K P T+
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLE-RMVSEFKVNPDNVTY--------- 243
Query: 351 ELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANW 410
+ +LK+++ GR+ + ++L +M+ G V +
Sbjct: 244 --------------------------NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 411 QSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMV 470
+ + + +G ++A + V ++ D ++ L+ G C AG++ + L+ M
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMK 337
Query: 471 KKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGF 530
+ +++LI + +++A K++ E ++ +K T+ + + K L +
Sbjct: 338 SLKLQPDVVTYNTLIDGCFELGLSLEARKLM-EQMENDGVKANQVTHNISL-KWLCKEEK 395
Query: 531 TDALN--VFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLR 585
+A+ V L+ HGF P I + I+ K G A++ + M K ++ L
Sbjct: 396 REAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLN 455
Query: 586 -MFEAFFKKRRPEEAQNFLS 604
+ +A K+R+ +EA N L+
Sbjct: 456 TILDALCKERKLDEAHNLLN 475
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 131/337 (38%), Gaps = 8/337 (2%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
CK D TYN + + +E + + + G ++ ++ +CK + A
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLK 381
+L KP L+ +V +D D + VK+ G + ++ + ++
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMD-DAVNMKVKLID-RGVSPDAAIYNMLMS 458
Query: 382 SLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDS 441
L GR + EM D + A + + G+ ++A + + G
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 442 DQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKIL 501
D ++++ G C +G LD+AL M ++ + + ++I Y A KI
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 502 CELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISK 558
+ K K KP TY L++ QG F A F M+ P + + IR ++K
Sbjct: 579 RYMEKNK-CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAK 637
Query: 559 RGSG-DDAVQFLS-AMTYKKFPSTSVYLRMFEAFFKK 593
S + AV + MT K P+ + + + F KK
Sbjct: 638 ESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 139/344 (40%), Gaps = 43/344 (12%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELY 324
+G ++ +++ R + ++G++R ++ E VL + + + AVE+Y
Sbjct: 98 NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157
Query: 325 EFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLT 384
++ + D + V+ C NS++ ++KS
Sbjct: 158 DYVVELYDS---------VPDVIAC-----------------------NSLLSLLVKS-- 183
Query: 385 SVGRIGEWNKVLKEMEDCGYVASANWQSEIAFR-LGAVGEKEQANEFVNRIEAAGSDSDQ 443
R+G+ KV EM D G + N+ + I + + G+ E + + G +
Sbjct: 184 --RRLGDARKVYDEMCDRGD-SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 444 EIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCE 503
+++++ G+C G+++ A FKE+ K + F ++I+ +C + + ++L E
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 504 LVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF---IRHISKRG 560
VKE+ L+ ++ G D G + + P + + I + K G
Sbjct: 301 -VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEG 359
Query: 561 SGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
+ AV FL + K P+ Y + +A+ K + + A L
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 395 VLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHC 454
++ EM+ GY + + L AV + ++A + V + AAG D E + +++ C
Sbjct: 158 IINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLC 217
Query: 455 VAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRH 514
+A + KEMV K GIS + +++ NR I + E V+ ++
Sbjct: 218 LARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEF 277
Query: 515 DTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
++Y+++V L + A V M GF P+I
Sbjct: 278 ESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYI 312
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
GRI ++L M D G S+ + I L + ++ ++ G + D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
+ L+ G C +GNL+ AL E +++ F LI +CN + +A+K+L + K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
E+ ++P T+ +L+S L +G + +++ MK G P
Sbjct: 266 ER-IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEP 305
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%)
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
++++E G D ++++++ +GNLD+A+ F++M + A F++LI Y
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
+ + ++ ++L +++++ L+P T +LV Q +A N+ M+++G P +
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 550 DPF 552
F
Sbjct: 496 VTF 498
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 112/569 (19%), Positives = 224/569 (39%), Gaps = 66/569 (11%)
Query: 29 RTLSSLPH-----RPTPN-----FTFPANPSLRHFSSDPVLEQPDPDHAIIADLFSKPAA 78
R++SSLPH + T N F+ P + L + DP ++ + F +
Sbjct: 13 RSISSLPHLSQRFKQTENEIVQMFSVPNHEESEKPQEKWKLSRKDPSVRMLDERFIRIVK 72
Query: 79 ----DPSVVKSQLDSNRVSINHDAVIAELLKLESSPEVAQRFFRWVLETHPEMLSSKSYN 134
P K+ L+ ++ ++H ++ +L+++ V +FF+W + +Y
Sbjct: 73 IFKWGPDAEKA-LEVLKLKVDH-RLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYM 130
Query: 135 AMLRALGANGLVDEFWEMVSVMKRKGY-GVSRGVKERALECFEKNGLEGDVVRLKALFDK 193
++R L L E + + + R Y VS V ++ + + KAL
Sbjct: 131 TLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVS-----KAL--- 182
Query: 194 NNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFF 253
+V+ R+ K + ++S ++ L+ E G ++
Sbjct: 183 -------------------SVFYQAKGRKCKPTSSTYNSVILMLMQE--GQHEKVHEVYT 221
Query: 254 RWVEESGLCKHDGCTYNAMA---RVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGR 310
E G C D TY+A+ +GR D+ R L +M+ + + + +LG
Sbjct: 222 EMCNE-GDCFPDTITYSALISSYEKLGRNDSAIR---LFDEMKDNCMQPTEKIYTTLLGI 277
Query: 311 FCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSG 368
+ K ++ A++L+E PT T L+K + +D + +++ G
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR----DG 333
Query: 369 NAIPNSMVDAVLKSLTSVGRIGEWNKVLKEME--DCGYVASANWQSEIAFRLGAVGEKEQ 426
++ ++ L VGR+ E V EM C ++ + I + +
Sbjct: 334 LTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV-VSYNTVIKALFESKAHVSE 392
Query: 427 ANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
+ + ++++A + + L+ G+C ++KAL +EM +K A+ SLI+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 487 SYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFP 546
+ R A ++ EL KE Y +++ G ++A+++F MK G
Sbjct: 453 ALGKAKRYEAANELFKEL-KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 547 PFI---DPFIRHISKRGSGDDAVQFLSAM 572
P + + + + K G ++A L M
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKM 540
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 457 GNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDT 516
GN+ +AL+ +KEM +K + + ++ +I C+ + AY +C++VK + + P T
Sbjct: 279 GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK-RGVNPDVFT 337
Query: 517 YKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
Y L+S L +G F +A ++ G M+ G P
Sbjct: 338 YNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 94/231 (40%), Gaps = 5/231 (2%)
Query: 377 DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEA 436
D ++ L + R+ + +L EM+ G + S + L + A V+ + +
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 437 AGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAID 496
G + ++D + G ++KA F M+ I A A+ SLI YC
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 497 AYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFI 553
Y++L E+ K++ + TY +V + + G A N+ M G P + I
Sbjct: 401 GYELLVEM-KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 554 RHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFL 603
+ + DA++ L M + P Y + K +R +EA++FL
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 97/221 (43%), Gaps = 6/221 (2%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
TY ++ + + + +D+ ++ +M+ G +++I + ++ FCKR ++ A L+
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 328 MAGADKPTPQCCTFLLKKVVTCKEL--DMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTS 385
+ P+ L+ + +DL+ +++K +++D +LK
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD--- 737
Query: 386 VGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEI 445
G + +++ EM+ G V + I L G+ + + ++ + I
Sbjct: 738 -GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLI 796
Query: 446 WDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLIS 486
+++++ GH GNLD+A EM+ K + FD L+S
Sbjct: 797 YNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 16/335 (4%)
Query: 249 ALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVL 308
A I F + E GL K + TY+ + R ++V M + E+ + ++
Sbjct: 497 ARIVFSNILEKGL-KPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 309 GRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVT---CKELDMDLFSRVVKVFS 365
CK A EL +A + C + + + KE +MD S V
Sbjct: 556 NGLCKVGQTSKAREL----LANMIEEKRLCVSCMSYNSIIDGFFKEGEMD--SAVAAYEE 609
Query: 366 GSGNAI-PNSMV-DAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGE 423
GN I PN + +++ L R+ + ++ EM++ G +
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 424 KEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDS 483
E A+ + + G + Q I++SL+ G GN+ ALD +K+M+K G + +
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 484 LISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTH 543
LI I A ++ E+ + L P Y ++V+ L +G F + +F MK +
Sbjct: 730 LIDGLLKDGNLILASELYTEM-QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 544 GFPPFI---DPFIRHISKRGSGDDAVQFLSAMTYK 575
P + + I + G+ D+A + M K
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDK 823
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 133/314 (42%), Gaps = 27/314 (8%)
Query: 268 TYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFA 327
TY + +E ID+ ++L MR G +I + ++G CK + ++ A+ LY
Sbjct: 285 TYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEI 344
Query: 328 MAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVG 387
P +L K++ C + SR+ +V G I V + KSL G
Sbjct: 345 KRSGIPPDRG----ILGKLL-CSFSEESELSRITEVIIGD---IDKKSVMLLYKSLFE-G 395
Query: 388 RIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWD 447
I N ++ E N++S+ G E + +A DSD
Sbjct: 396 FIR--NDLVHEAYSFIQNLMGNYESD--------GVSEIVKLLKDHNKAILPDSDSL--- 442
Query: 448 SLVVGHCVAGN-LDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
S+V+ V N +D A+ ++V+ I ++++I C R+ ++ K+L E+ K
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM-K 501
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDP---FIRHISKRGSGD 563
+ ++P T + L + F AL++ M+ +GF P+I ++ + + G
Sbjct: 502 DAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAV 561
Query: 564 DAVQFLSAMTYKKF 577
DA ++L + + F
Sbjct: 562 DACKYLDDVAGEGF 575
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/470 (18%), Positives = 176/470 (37%), Gaps = 62/470 (13%)
Query: 128 LSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRL 187
L + +N+++R+ G GL E ++ MK+ G S L K G G
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMA--- 192
Query: 188 KALFDK-NNCNSVEKDCARVCRIVR---NNVWGDDVEREIKDLNVGFSSEVVKLVLESLG 243
LFD+ V D ++ N D+ R KD+
Sbjct: 193 HDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDM----------------- 235
Query: 244 SEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDM--RGAGFEMEI 301
E C D TYN + + R + ++ M + +
Sbjct: 236 --------------ELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNV 281
Query: 302 ETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVV 361
++ ++ +C ++ I +AV ++ ++ KP L+K + D +
Sbjct: 282 VSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYD-----EIK 336
Query: 362 KVFSGSGNAIPNSMVDA-----VLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAF 416
+ G +A DA ++K+ G + KV +EM + + S +
Sbjct: 337 DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIR 396
Query: 417 RLGAVGEKEQA----NEFVNRIEAAGSDSDQEI---WDSLVVGHCVAGNLDKALDSFKEM 469
L E ++A NE + G D + + ++ + C G +A F+++
Sbjct: 397 TLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQL 456
Query: 470 VKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGG 529
+K+ G+ ++ +LI+ +C + AY++L +++ +E P +TY+LL+ LL G
Sbjct: 457 MKR-GVQDPPSYKTLITGHCREGKFKPAYELLVLMLR-REFVPDLETYELLIDGLLKIGE 514
Query: 530 FTDALNVFGLMKTHGFPPFIDPF---IRHISKRGSGDDAVQFLSAMTYKK 576
A + M + P F + ++KR +++ ++ M K+
Sbjct: 515 ALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKR 564
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 129/353 (36%), Gaps = 64/353 (18%)
Query: 262 CKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAV 321
C+ D TY A+ + + D L+ M E ++ + V+ CK R + DA+
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 322 ELYEFAMAGADKPTPQCCTFLLKKVVTC----------KELDMDLFSRVVKVFSGSGNAI 371
L+ +P F +++C L D+ R + + N +
Sbjct: 261 NLFTEMDNKGIRPD----VFTYSSLISCLCNYGRWSDASRLLSDMLERKI-----NPNVV 311
Query: 372 P-NSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
NS++DA K G++ E K+ EM Q I
Sbjct: 312 TFNSLIDAFAKE----GKLIEAEKLFDEM----------IQRSI---------------- 341
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCN 490
D + ++SL+ G C+ LD+A F MV K+ + +++LI+ +C
Sbjct: 342 ---------DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 491 MNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI- 549
+ +D ++ ++ + + L TY L+ +A VF M + G P I
Sbjct: 393 AKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 550 --DPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEA 599
+ + + K G + A+ + K P Y M E K + E+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 131/321 (40%), Gaps = 31/321 (9%)
Query: 256 VEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRR 315
+E SGL K D TY + +V K+ DM+ G T+ ++
Sbjct: 364 MESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAG 423
Query: 316 MIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVF-SGSGNAIPNS 374
+++ A L+E +A +P QC LL V + D R ++F S G+++ S
Sbjct: 424 LVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYD-----RAFRLFQSWKGSSVNES 478
Query: 375 MV--DAVLKSLTSVGRIGEWN---KVLKEMEDCGYVASAN------WQSEIAFRLGAVG- 422
+ D V K TS I + N ++ + Y+ ++ + L A G
Sbjct: 479 LYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT 538
Query: 423 EKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEM----VKKEGISYA 478
+ + E ++ +++ G +Q W +L+ +G+++ A+ + M + + ++Y
Sbjct: 539 DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYT 598
Query: 479 GAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDA---LN 535
A C N+ + L E ++ ++KP TY L+ G + L
Sbjct: 599 TAI-----KICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLA 653
Query: 536 VFGLMKTHGFPPFIDPFIRHI 556
++ M+ G+ P D F++ +
Sbjct: 654 IYQDMRNAGYKPN-DHFLKEL 673
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 11/251 (4%)
Query: 265 DGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEM--EIETFVKVLGRFCKRRMIKDAVE 322
D TYN + + + + + ++ V +MR F++ ++ +F ++ C + +++A
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVVYEFVDEMRD-DFDVKPDLVSFTILIDNVCNSKNLREA-- 249
Query: 323 LYEFAMAGADKPTPQCCTFLLKKVVT--CKELDMDLFSRVVKVFSGSGNAIPNSMVDAVL 380
+Y + G P C FL ++ C V K G + ++
Sbjct: 250 MYLVSKLGNAGFKPDC--FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSD 440
L+ GR+ E LK M D GY + + + GE A + +EA G
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA 367
Query: 441 SDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYK 499
+ +++L+ G C A +DK ++ + EM+K G+ + + +L+ S + +AY+
Sbjct: 368 PNDCTYNTLLHGLCKARLMDKGMELY-EMMKSSGVKLESNGYATLVRSLVKSGKVAEAYE 426
Query: 500 ILCELVKEKEL 510
+ V K L
Sbjct: 427 VFDYAVDSKSL 437
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 44/271 (16%)
Query: 311 FCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNA 370
+ K MI D++ ++E + KP Q CT LL +V
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV----------------------- 179
Query: 371 IPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEF 430
+ D V W K+ K+M G VA+ + + + G+ E+A +
Sbjct: 180 -KQRLTDTV------------W-KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 431 VNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS-YAGAFDSLISSYC 489
++ +E G D +++L+ +C +AL S ++ +++ G++ ++S I +
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEAL-SVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
R +A ++ E+ + ++ H TY L+ +AL + +M++ GF P +
Sbjct: 285 REGRMREATRLFREI--KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 550 ---DPFIRHISKRGSGDDAVQFLSAMTYKKF 577
+ +R + + G +A + L+ M+ KK
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 4/226 (1%)
Query: 394 KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGH 453
KV KEM D + + + L G+ +A +++ +AG + +++L+ G
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 454 CVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPR 513
C L +ALD F + + + ++ LI +YC + + D + + E+ +E + P
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPD 435
Query: 514 HDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFI--RHISKRGSGDDAVQFLSA 571
TY L++ L G A +F + + G P + I ++G A L
Sbjct: 436 VGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 572 MTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSKCPRYIRNHADV 616
M+ P Y + + + K+ + A N ++ + R +V
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 7/274 (2%)
Query: 276 IGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPT 335
+ R++ ++ K+ M+ G + T+ ++ +CK ++ A LY+ + P
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 336 PQCCTFLLKKVVTCKELDM--DLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWN 393
L+ +EL LF +VK + N ++ KS G + E
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS----GNMLEAV 359
Query: 394 KVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGH 453
+L EME + + L + +AN +++ ++SL+ G+
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGY 419
Query: 454 CVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPR 513
C N+++ALD EM F +LI YCN+ R I A L + K + P
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV-RDIKAAMGLYFEMTIKGIVPD 478
Query: 514 HDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPP 547
TY L+ + +AL ++ M G P
Sbjct: 479 VVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 89/223 (39%), Gaps = 5/223 (2%)
Query: 387 GRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIW 446
G + K+L EM G + + L + E+A + ++ G + +
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 447 DSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVK 506
+++ G+C GN+ +A +KE++ E + F +L+ +C + A + +VK
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 507 EKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFIRHISKRGSGDDAV 566
+ P Y L+ G +A+ + M++ P + + I+ D
Sbjct: 333 FG-VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 567 Q----FLSAMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
+ F + FPS++ Y + + K+ E+A + S+
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSE 434
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 154/420 (36%), Gaps = 78/420 (18%)
Query: 197 NSVEK-DCARVCRIVRNN--VWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFF 253
N+V K D + + ++ N V G +E + + + S E+V + + L S P F
Sbjct: 63 NTVSKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVF 122
Query: 254 RWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDM----RGAGFEMEIETFVKVLG 309
+W E ++++ + + + W LV D G+ + +TF+ ++
Sbjct: 123 KWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNL-VSADTFIVLIR 181
Query: 310 RFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGN 369
R+ + M++ A+ +EFA + P C +
Sbjct: 182 RYARAGMVQQAIRAFEFARSYE----PVC-----------------------------KS 208
Query: 370 AIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANE 429
A +++ +L +L G + E + L E G +NW +
Sbjct: 209 ATELRLLEVLLDALCKEGHVREASMYL---ERIGGTMDSNWVPSV--------------- 250
Query: 430 FVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC 489
I++ L+ G + L +A ++EM + +LI YC
Sbjct: 251 --------------RIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296
Query: 490 NMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI 549
M R A ++L E+ K E++ + ++ L G ++AL + P I
Sbjct: 297 RMRRVQIAMEVLEEM-KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTI 355
Query: 550 ---DPFIRHISKRGSGDDAVQFLSAMTYKKF-PSTSVYLRMFEAFFKKRRPEEAQNFLSK 605
+ +++ K G A + L M + P+T+ Y F+ F K + EE N K
Sbjct: 356 VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFK 415
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 107/255 (41%), Gaps = 5/255 (1%)
Query: 353 DMDLFSRVVKVFSGSGNAIPNSMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQS 412
D++ +RV+++ S G + +++K G + E V + +++ VA +
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 413 EIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKK 472
+ G+ A + + G ++ I +SL+ G+C +G L +A F M
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 473 EGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTD 532
+++L+ YC +A K LC+ + +KE+ P TY +L+ G F D
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALK-LCDQMCQKEVVPTVMTYNILLKGYSRIGAFHD 454
Query: 533 ALNVFGLMKTHGFPP---FIDPFIRHISKRGSGDDAVQFLSAMTYKKFPSTSVYLR-MFE 588
L+++ +M G + + K G ++A++ + + + ++ L M
Sbjct: 455 VLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMIS 514
Query: 589 AFFKKRRPEEAQNFL 603
K + EA+ L
Sbjct: 515 GLCKMEKVNEAKEIL 529
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 21/362 (5%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+G Y M ++G+ + + ++ M+ E + F V+ F + ++DA+ L
Sbjct: 44 HNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISL 103
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAV---L 380
++ LL+++V KE +++ + + + NS + A+ +
Sbjct: 104 FKSLHEFNCVNWSLSFDTLLQEMV--KESELEAACHIFRKYCYGWEV--NSRITALNLLM 159
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVN----RIEA 436
K L V R ++V +EM G + + G+ E+A + RI
Sbjct: 160 KVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQ 219
Query: 437 AGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC-NMNRAI 495
GS D ++ L+ C AG +D A++ ++++K + + + + + + + I
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Query: 496 DAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFI-- 553
+ K L + P D+Y + + L +G + V M++ GF P PFI
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP--TPFIYG 337
Query: 554 ---RHISKRGSGDDAVQFLS--AMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSKCPR 608
+ + + G +AV ++ M P+ VY + + + EA +L K +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 609 YI 610
+
Sbjct: 398 QV 399
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 147/362 (40%), Gaps = 21/362 (5%)
Query: 264 HDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIETFVKVLGRFCKRRMIKDAVEL 323
H+G Y M ++G+ + + ++ M+ E + F V+ F + ++DA+ L
Sbjct: 44 HNGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISL 103
Query: 324 YEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMVDAV---L 380
++ LL+++V KE +++ + + + NS + A+ +
Sbjct: 104 FKSLHEFNCVNWSLSFDTLLQEMV--KESELEAACHIFRKYCYGWEV--NSRITALNLLM 159
Query: 381 KSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVN----RIEA 436
K L V R ++V +EM G + + G+ E+A + RI
Sbjct: 160 KVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQ 219
Query: 437 AGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYC-NMNRAI 495
GS D ++ L+ C AG +D A++ ++++K + + + + + + + I
Sbjct: 220 KGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGI 279
Query: 496 DAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPFI-- 553
+ K L + P D+Y + + L +G + V M++ GF P PFI
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEP--TPFIYG 337
Query: 554 ---RHISKRGSGDDAVQFLS--AMTYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSKCPR 608
+ + + G +AV ++ M P+ VY + + + EA +L K +
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSK 397
Query: 609 YI 610
+
Sbjct: 398 QV 399
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 143/368 (38%), Gaps = 56/368 (15%)
Query: 201 KDCARVCRIV-RNNVWGDDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEES 259
+D +VC + + + +DV +E+ +V + +V VL + ++A FF W
Sbjct: 100 EDIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQ 159
Query: 260 GLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMR-------------------------- 293
H G TYNAM V+G+ D W+LV +M
Sbjct: 160 TGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKY 219
Query: 294 ----GAGFEMEIETFVK--------VLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTF 341
A EME VK ++ K I+ A E++ + KP +
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-LKLFDTIKPDARTFNI 278
Query: 342 LLKKVVTCKELD-----MDLFSRVVKVFSGSGNAIP-NSMVDAVLKSLTSVGRIGEWNKV 395
L+ ++ D MDL +KV + + + S V+A K G N++
Sbjct: 279 LIHGFCKARKFDDARAMMDL----MKVTEFTPDVVTYTSFVEAYCKE----GDFRRVNEM 330
Query: 396 LKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCV 455
L+EM + G + + + LG + +A +++ G D + + SL+
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 456 AGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKE--KELKPR 513
G A + F++M + ++++IS+ + +R A ++L + E + P
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 514 HDTYKLLV 521
+TY L+
Sbjct: 451 VETYAPLL 458
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 35/213 (16%)
Query: 375 MVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRI 434
+ A ++ L + ++VL+ + + S ++ I G G E A++ + +
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 435 EAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGIS--------------YAGA 480
+ + +++L+ + + LD+A+ +FKE+ +K GI+ G+
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 481 FDSLISSYCNMNRA-----IDAYKILCE----------------LVKEKELKPRHDTYKL 519
D ++S + + + + ++ L E L+K K L P +Y
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 520 LVSKLLAQGGFTDALNVFGLMKTHGFPPFIDPF 552
V L FTDALN+ +MKT G P + +
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTY 301
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/396 (18%), Positives = 151/396 (38%), Gaps = 15/396 (3%)
Query: 217 DDVEREIKDLNVGFSSEVVKLVLESLGSEPSKALIFFRWVEESGLCKHDGCTYNAMARVI 276
DD+E + + SS +V+ VL+ + A FF W H +Y+ + ++
Sbjct: 53 DDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHILVEIL 112
Query: 277 GREDTIDRFWKLVGDMRGAG-FEMEIETFVKVLGRFCKRRMIKDAVELYEFAMAGADKPT 335
G W + + R FE+ + F V + + + +A + + KP
Sbjct: 113 GSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPC 172
Query: 336 PQCCTFLLKKVVTCKELD--MDLFSRVVKVFSGSGNAIPNSMVDAVL-KSLTSVGRIGEW 392
LL + K ++ + F + G G +P++ ++L + +
Sbjct: 173 VDDLDQLLHSLCDKKHVNHAQEFFGKA----KGFG-IVPSAKTYSILVRGWARIRDASGA 227
Query: 393 NKVLKEMEDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVG 452
KV EM + V + + L G+ + + + G D + +
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 287
Query: 453 HCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAIDAYKILCELVKEKELKP 512
+C AG++ A M + + + F+ +I + C + DAY +L E++ +K P
Sbjct: 288 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI-QKGANP 346
Query: 513 RHDTYKLLVSKLLAQGGFTDALNVFGLM-KTHGFPP--FIDPFIRHISKRGSGDDAVQFL 569
TY +++ A + M +T P + ++ + + G D A +
Sbjct: 347 DTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIW 406
Query: 570 SAMTYKKF-PSTSVYLRMFEAFFKKR-RPEEAQNFL 603
M+ +KF P+ + Y M +K+ + EEA +
Sbjct: 407 EGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 8/244 (3%)
Query: 336 PQCCTFLLKKVVTCKELDMDLFSRVVKVFSGSGNAIPNSMV-DAVLKSLTSVGRIGEWNK 394
P C F + CK D++ VV+ SG + PNS+ ++ L + R E +
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 395 VLKEMEDCGYVASANWQSEIAFR-LGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGH 453
+ ++M ++ + GE E+A + ++ ++ G + + + +L+ G
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 454 CVAGNLDKALDSFKEMVKKEGISY-AGAFDSLISSYCNMNRAIDAYKILCELVKEKELKP 512
C G + +A +F E VKK G+ + +L++ +C +A K+L E+ K +
Sbjct: 314 CKVGKIQEAKQTFDE-VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM-KASRCRA 371
Query: 513 RHDTYKLLVSKLLAQGGFTDALNV---FGLMKTHGFPPFIDPFIRHISKRGSGDDAVQFL 569
TY +++ L ++G +AL + +G H + + G + AV+FL
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 570 SAMT 573
S M+
Sbjct: 432 SVMS 435
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 5/163 (3%)
Query: 425 EQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSL 484
E A V +E G D D ++ +++ GH N+ KA+D F +M+KK S+
Sbjct: 308 EDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSI 367
Query: 485 ISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHG 544
+ YC M +AY + E +E + Y + L G +A+ +F M G
Sbjct: 368 LQCYCQMGNFSEAYDLFKEF-RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 545 FPPFIDPFIRHISK---RGSGDDAVQFLSAMT-YKKFPSTSVY 583
P + + I +G DA + M K P +Y
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 110/545 (20%), Positives = 212/545 (38%), Gaps = 81/545 (14%)
Query: 128 LSSKSYNAMLRALGANGLVDEFWEMVSVMKRKGYGVSRGVKERALECFEKNGLEGDVVRL 187
+ + +YN ++ L +GL DE ++ +S M + G ++ F K G+ VR
Sbjct: 159 IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCK---VGNFVRA 215
Query: 188 KALFDKNNCNSVEKDCARVCRIVRNNVWGDDVEREIKDLNV-GFSSEVVKL--VLESL-- 242
KAL D+ + E + ++ + +E +D+ + GF +VV ++ L
Sbjct: 216 KALVDEIS----ELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271
Query: 243 GSEPSKALIFFRWVEESGLCKHDGCTYNAMARVIGREDTIDRFWKLVGDMRGAGFEMEIE 302
G + + + R +EE + + TY + + + + L M G +++
Sbjct: 272 GGKVLEGGLLLREMEEMSVYPNH-VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV 330
Query: 303 TFVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVK 362
+ ++ K +++A + F M D P T+ CK D+ ++
Sbjct: 331 VYTVLMDGLFKAGDLREAEK--TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 363 VFSGSGNAIPN-----SMVDAVLKSLTSVGRIGEWNKVLKEMEDCGYVASANWQSEIAFR 417
+ IPN SM++ +K G + E +L++MED V + +
Sbjct: 389 QML-EKSVIPNVVTYSSMINGYVKK----GMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 418 LGAVGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKK----E 473
L G++E A E + G + + I D+LV G + + K+MV K +
Sbjct: 444 LFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Query: 474 GISYAG-------------------------------AFDSLISSYCNMNR--AIDAYKI 500
I+Y +++ LIS + A AYK
Sbjct: 504 QINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG 563
Query: 501 LCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGFPPFI---DPFIRHIS 557
+ +EK ++P T+ ++++ QG L ++ MK+ G P + + + +
Sbjct: 564 M----REKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 558 KRGSGDDAVQFLSAM----------TYKKFPSTSVYLRMFEAFFKKRRPEEAQNFLSKCP 607
+ G ++A+ L+ M TY+ F TS + +A FK E ++ K
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH--ETLLSYGIKLS 677
Query: 608 RYIRN 612
R + N
Sbjct: 678 RQVYN 682
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 2/170 (1%)
Query: 377 DAVLKSLTSVGRIGEWNKVLKEM-EDCGYVASANWQSEIAFRLGAVGEKEQANEFVNRIE 435
+ ++ L VG+ + ++L+ + ++ Y S + I VG+ + A E +
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 436 AAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGAFDSLISSYCNMNRAI 495
G + + SL+ G C + +D AL+ EM E A+ +LI +C N
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 496 DAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLMKTHGF 545
AY + EL E L P Y L+S G A++++ M G
Sbjct: 678 TAYTLFSEL-PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 123/307 (40%), Gaps = 17/307 (5%)
Query: 248 KALIFFRWVEESGLCKHDGCTYNAMARVIGRED----TIDRFWKLVGDMRGAGFEMEIET 303
K L FF W + HD ++ M V+ + +IDR ++ ++ +G E++
Sbjct: 54 KTLNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDR---IIERLKISGCEIKPRV 110
Query: 304 FVKVLGRFCKRRMIKDAVELYEFAMAGADKPTPQCCTFLLKKVVTCKELDMDLFSRVVKV 363
F+ +L F + + A+E+Y + P + ++ +++ + +++
Sbjct: 111 FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDV-----NFKLNVVNGALEI 165
Query: 364 FSGSGNAIPNSMVDAVLKSLTSVGRIGEW---NKVLKEMEDCGYVASANWQSEIAFRLGA 420
F G S D L S G G+ VLK M G+ + +I
Sbjct: 166 FEGIRFRNFFSF-DIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 421 VGEKEQANEFVNRIEAAGSDSDQEIWDSLVVGHCVAGNLDKALDSFKEMVKKEGISYAGA 480
G +A + V + +G +W LV G +G KA+D F +M++
Sbjct: 225 TGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVT 284
Query: 481 FDSLISSYCNMNRAIDAYKILCELVKEKELKPRHDTYKLLVSKLLAQGGFTDALNVFGLM 540
+ SLI + ++ +A+ +L + V+ + L P L++ G F +A VF +
Sbjct: 285 YTSLIKGFVDLGMVDEAFTVLSK-VQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 541 KTHGFPP 547
+ P
Sbjct: 344 EKRKLVP 350