Miyakogusa Predicted Gene
- Lj1g3v3102660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3102660.1 tr|Q52ZI8|Q52ZI8_PEA CONSTANS-LIKE a OS=Pisum
sativum GN=COLa PE=2 SV=1,79.02,0,B-Box-type zinc finger,Zinc finger,
B-box; seg,NULL; ZF_BBOX,Zinc finger, B-box; CCT,CCT domain;
FAM,NODE_53498_length_1238_cov_66.840874.path2.1
(399 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 272 4e-73
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 245 3e-65
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 241 6e-64
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 164 1e-40
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 154 9e-38
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 142 5e-34
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 111 7e-25
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 111 1e-24
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 65 6e-11
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 65 9e-11
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 60 3e-09
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 60 3e-09
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 60 3e-09
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 60 3e-09
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 59 5e-09
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 59 6e-09
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 59 7e-09
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 59 9e-09
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 58 1e-08
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 58 1e-08
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 58 1e-08
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 58 1e-08
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 58 1e-08
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 58 1e-08
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 58 1e-08
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 57 2e-08
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 57 3e-08
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 56 4e-08
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 56 5e-08
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 55 8e-08
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 55 1e-07
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 54 2e-07
AT1G49130.1 | Symbols: | B-box type zinc finger protein with CC... 53 4e-07
AT1G49130.2 | Symbols: | B-box type zinc finger protein with CC... 52 5e-07
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/391 (43%), Positives = 202/391 (51%), Gaps = 65/391 (16%)
Query: 19 FPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXX 78
+ R CDTCRSA CTV+C ADSAYLC CDA+VHAANRVASRHERV VC++CE APAAF
Sbjct: 12 WARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLC 71
Query: 79 XXXXXXXXXXXXXXIHSANPLASRHHRVPILPISG--CLYGPPANLLXXXXXXXXXXXXX 136
IHSANPLA RH RVPILP+S C P+
Sbjct: 72 KADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSMAPSE--------------- 116
Query: 137 XXXXXXXXXXXXXXXXAASWLLLNPVKXXXXXXXXXXXEHNQQGNGFLFSGEVDEYLDLV 196
ASWLL NP K Q NGFLF E YLDLV
Sbjct: 117 -----TDADNDEDDREVASWLLPNPGKNI-----------GNQNNGFLFGVE---YLDLV 157
Query: 197 DCNSCGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSVVPVXXXXXXX--- 253
D +S +NQF Y Q+ + GD VVP+
Sbjct: 158 DYSSSMDNQFEDNQ--------------------YTHYQRSFGGDGVVPLQVEESTSHLQ 197
Query: 254 --AHHFQLGLEFEPSKAGFSYNGXXXXX---XXXXXXMDVGVVPDSTMRDVSVSYSRPSK 308
+FQLG+ + S +G YN MD+ VVP+ST D++V + R +K
Sbjct: 198 QSQQNFQLGINYGFS-SGAHYNNNSLKDLNHSASVSSMDISVVPESTASDITVQHPRTTK 256
Query: 309 GTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGR 368
TID SGP Q+ +P++REARVLRY IRYASRKAYAE RPRIKGR
Sbjct: 257 ETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGR 316
Query: 369 FAKRTDVEAEVDQMFSTTLITEVGYGIVPSF 399
FAKR + EAE +++FST+L++E GYGIVPSF
Sbjct: 317 FAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 158/387 (40%), Positives = 188/387 (48%), Gaps = 39/387 (10%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R CDTCRS CTV+C ADSAYLC CDAQVH+ANRVASRH+RV VCE+CE APAAF
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGCLYGPPANLLXXXXXXXXX-XXXXXXX 139
+HSANPLA RH RVPILPISG +
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVD 137
Query: 140 XXXXXXXXXXXXXAASWLLLNPVKXXXXXXXXXXXEHNQQGNGFLFSGEVDEYLDLVDCN 199
ASWL N K G LFS DEYL+LVD N
Sbjct: 138 QEEGEEGDKDAKEVASWLFPNSDKNNNNQNN-----------GLLFS---DEYLNLVDYN 183
Query: 200 SCGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSVVPVXXXXXX-----XA 254
S + +F VPQ Y GD VVP+
Sbjct: 184 SSMDYKFTGEYSQHQQNC--------------SVPQTSYGGDRVVPLKLEESRGHQCHNQ 229
Query: 255 HHFQLGLEFEPSKAGFSYNGXXXXXXXXXXXMDVGVVPDSTMRDVSVSYSRPSKGTIDLF 314
+FQ +++ S ++ NG M+ GVVP+ST + S+ R KGT++
Sbjct: 230 QNFQFNIKYGSSGTHYNDNGSINHNAYISS-METGVVPESTACVTTASHPRTPKGTVEQQ 288
Query: 315 SGPALQM--SSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKR 372
PA QM + SP+DREARVLRY IRYASRKAYAE RPR+ GRFAKR
Sbjct: 289 PDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
Query: 373 TDVEAEVDQMFSTTLITEVGYGIVPSF 399
++EAE +Q F+T L+ GYGIVPSF
Sbjct: 349 -EIEAE-EQGFNTMLMYNTGYGIVPSF 373
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 189/389 (48%), Gaps = 41/389 (10%)
Query: 15 VKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPA 74
V++ + + CDTCRSA CTV+CRADSAYLC+ CDAQVHAANR+ASRHERV VC++CE APA
Sbjct: 4 VESNWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPA 63
Query: 75 AFXXXXXXXXXXXXXXXXIHSANPLASRHHRVPILPISGCLYGPPANLLXXXXXXXXXXX 134
AF IHSANPLA RH RVPILPIS Y A
Sbjct: 64 AFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTAT---NHSCETTVTD 120
Query: 135 XXXXXXXXXXXXXXXXXXAASWLLLNPVKXXXXXXXXXXXEHNQQGNGFLFSGEVDEYLD 194
AASWLL GN FS DE+L+
Sbjct: 121 PENRLVLGQEEEDEDEAEAASWLL--------------PNSGKNSGNNNGFSIG-DEFLN 165
Query: 195 LVDCNSCGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSVVP----VXXXX 250
LVD +S + QF VPQ+ Y D VVP V
Sbjct: 166 LVDYSS-SDKQFTDQSNQYQLDC--------------NVPQRSYGEDGVVPLQIEVSKGM 210
Query: 251 XXXAHHFQLGLEFEPSKAGFSYNGXXXXXXXXXXXMDVGVVPDSTMRDVSVSYSRPSKGT 310
+FQL + A S NG MD+GVVP+ST D +VS R K
Sbjct: 211 YQEQQNFQLSINCGSWGALRSSNG-SLSHMVNVSSMDLGVVPESTTSDATVSNPRSPKAV 269
Query: 311 IDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFA 370
D P QM SP DREARVLRY IRYASRKAYAE RPRIKGRFA
Sbjct: 270 TDQPPYPPAQM---LSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFA 326
Query: 371 KRTDVEAEVDQMFSTTLITEVGYGIVPSF 399
K+ DV+ E +Q FST + + GYGIVPSF
Sbjct: 327 KKKDVDEEANQAFSTMITFDTGYGIVPSF 355
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 170/401 (42%), Gaps = 64/401 (15%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
++CD+C+SAT ++CR D+A+LC CD++VHAAN++ASRH RVW+CE CE APA
Sbjct: 48 KLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKA 107
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPI------SGCLYGPPANLLXXXXXXXXXXX 134
IHSANPLA RH RVP+ P G + N L
Sbjct: 108 DAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFL---------DD 158
Query: 135 XXXXXXXXXXXXXXXXXXAASWLLL-NPVKXXXXXXXXXXXEHNQQ----------GNGF 183
AASWLLL NP ++ G +
Sbjct: 159 CYFSDIDGNGSREEEEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQY 218
Query: 184 LFSGEVDEYLDLVDCNSCGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSV 243
LFS + D YLDL N + Q D V
Sbjct: 219 LFS-DPDPYLDLDYGN--------------------------VDPKVESLEQNSSGTDGV 251
Query: 244 VPVXXXXXX--XAHHFQLGLEFEPSKAGFSYNGXXX--XXXXXXXXMDVGVVPD-STMRD 298
VPV + ++F GF+Y G M+VGVVPD ++ D
Sbjct: 252 VPVENRTVRIPTVNENCFEMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGSVAD 311
Query: 299 VSVSYSRPSKGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAY 358
VS Y P+ D P Q + + +REARV+RY IRYASRKAY
Sbjct: 312 VSYPYGGPATSGAD----PGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAY 367
Query: 359 AETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPSF 399
AE RPRIKGRFAKRTD D + + + G+G+VP+F
Sbjct: 368 AEMRPRIKGRFAKRTDTNESNDVVGHGGIFS--GFGLVPTF 406
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 161/388 (41%), Gaps = 61/388 (15%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R CD C+S T VFCR DSA+LC CD ++H+ +RHERVWVCE CE APAA
Sbjct: 20 RSCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEVCEQAPAAVTCKA 75
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGCLYGPPANLLXXXXXXXXXXXXXXXXX 140
IHSANPLASRH RVP+ A +
Sbjct: 76 DAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVAKI--SASSTFGILGSSTTVD 133
Query: 141 XXXXXXXXXXXXAASWLLLNPVKXXXXXXXXXXXEHNQQGNGFLFSGEVDEYLDLVDCNS 200
WLL P E+ + + F+FS + D +D NS
Sbjct: 134 LTAVPVMADDLGLCPWLL--PNDFNEPAKIEIGTENMKGSSDFMFS-DFDRLIDFEFPNS 190
Query: 201 CGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSVVPVXXXX-----XXXAH 255
+Q GDS+VPV H
Sbjct: 191 FNHHQ------------------------------NNAGGDSLVPVQTKTEPLPLTNNDH 220
Query: 256 HFQLGLEFEPSK-AGFSYNGXXXXXXXXXXXMDVGVVPDSTMRDVSVSYSRPSKGTIDLF 314
F ++F SK + F+Y ++ GVVPD + SV+ S + T
Sbjct: 221 CFD--IDFCRSKLSAFTYPSQSVSHSVSTSSIEYGVVPDGNTNN-SVNRSTITSST---- 273
Query: 315 SGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTD 374
+G Q SS +DREARVLRY IRYASRKAYAE+RPRIKGRFAKRT
Sbjct: 274 TGGDHQASS----MDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRT- 328
Query: 375 VEAEVDQMFSTTLITEVG---YGIVPSF 399
E E D +F + + YG+VP+F
Sbjct: 329 -ETENDDIFLSHVYASAAHAQYGVVPTF 355
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 112/260 (43%), Gaps = 34/260 (13%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R CDTCRS CTV+C ADSAYLC CDAQVH+ANRVASRH+RV VCE+CE APAAF
Sbjct: 18 RPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEA 77
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGCLYGPPANLLXXXXXXXXX-XXXXXXX 139
+HSANPLA RH RVPILPISG +
Sbjct: 78 DDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVD 137
Query: 140 XXXXXXXXXXXXXAASWLLLNPVKXXXXXXXXXXXEHNQQGNGFLFSGEVDEYLDLVDCN 199
ASWL N K G LFS DEYL+LVD N
Sbjct: 138 QEEGEEGDKDAKEVASWLFPNSDKNNNNQNN-----------GLLFS---DEYLNLVDYN 183
Query: 200 SCGENQFXXXXXXXXXXXXXXXXXXXXXXXXYGVPQKGYAGDSVVPVXXXXX-----XXA 254
S + +F VPQ Y GD VVP+
Sbjct: 184 SSMDYKFTGEYSQHQQNC--------------SVPQTSYGGDRVVPLKLEESRGHQCHNQ 229
Query: 255 HHFQLGLEFEPSKAGFSYNG 274
+FQ +++ S ++ NG
Sbjct: 230 QNFQFNIKYGSSGTHYNDNG 249
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R+CD+C+S T+FCRAD+A+LC CD ++H AN++ASRHERVW+CE CE APA
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKA 65
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPI 111
IHSANPL+ RH RVPI P
Sbjct: 66 DAAALCVTCDRDIHSANPLSRRHERVPITPF 96
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 235 QKGYAGDSVVPVXXXXXXXAHHFQLGLEFEP-SKAGFSYNGXXXXXXXXXXXMDVGVVPD 293
+ D VVPV +F L S+ GF++ +DV +VP+
Sbjct: 151 ENSSGNDGVVPVQNKLFLNEDYFNFDLSASKISQQGFNF----INQTVSTRTIDVPLVPE 206
Query: 294 STMRDVSVSYSRPSKGTIDLFSGPALQMSSHFSPLDREARVLRYXXXXXXXXXXXXIRYA 353
S ++ + PA+Q+S P +REARVLRY IRYA
Sbjct: 207 SGGVTAEMTNT----------ETPAVQLS----PAEREARVLRYREKRKNRKFEKTIRYA 252
Query: 354 SRKAYAETRPRIKGRFAKRTD 374
SRKAYAE RPRIKGRFAKRTD
Sbjct: 253 SRKAYAEMRPRIKGRFAKRTD 273
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 61/94 (64%)
Query: 17 AKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAF 76
A R+CD+C+S T+FCRAD+A+LC CD ++H AN++ASRHERVW+CE CE APA
Sbjct: 2 ASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHV 61
Query: 77 XXXXXXXXXXXXXXXXIHSANPLASRHHRVPILP 110
IHSANPL+ RH RVPI P
Sbjct: 62 TCKADAAALCVTCDRDIHSANPLSRRHERVPITP 95
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R+CD C S+ V+C+ADSA LC CD QVH AN++ ++H R +C++C +P++
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCET 70
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGC 114
H+A+ +S H R P +GC
Sbjct: 71 ERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTGC 102
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
R+CD C S+ V+C+ADSA LC CD QVH AN++ ++H R +C++C +P++
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCET 70
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGC 114
H+A+ +S H R P +GC
Sbjct: 71 ERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTGC 102
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein 1
| chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV---------CEACECAP 73
C+ C +A TV C AD A LC CD ++HAAN++A +H+RV + C+ C+ A
Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEAS 64
Query: 74 AAFXXXXXXXXXXXXXXXXIHSANPLASRHHR 105
F IH+ NP S H R
Sbjct: 65 GFFFCLQDRALLCRKCDVAIHTVNPHVSAHQR 96
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV--------CEACECAP 73
+CD C SA VFC AD A LC CD +VH N++ASRH RV + C+ CE AP
Sbjct: 4 LCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICENAP 63
Query: 74 AAF 76
A F
Sbjct: 64 AFF 66
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXXXX 82
CD C T +FCRAD+A LC CD QVH AN ++ +H R +C+ C P +
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 83 XXXXXXXXXXIHSANPLASRHHRVPILPISGC 114
+H + ++ H R + SGC
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGFSGC 100
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV---------CEACECAP 73
C+ C +A TV C AD A LC CD ++HAAN++A +H+RV + C+ C+ A
Sbjct: 5 CNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDICQEAS 64
Query: 74 AAFXXXXXXXXXXXXXXXXIHSANPLASRHHR 105
F IH+ NP S H R
Sbjct: 65 GFFFCLQDRALLCRKCDVAIHTVNPHVSAHQR 96
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 21 RVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXX 80
RVC+ C++ V+C AD+A LC CDA+VH+AN ++ RH R +C++C+ P
Sbjct: 12 RVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFD 71
Query: 81 XXXXXXXXXXXXIHSANPLASRHHRVPILPISGCLYGPPA 120
H +S H R + +GC PPA
Sbjct: 72 HKMFLCHGCNDKFHGGG--SSEHRRRDLRCYTGC---PPA 106
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAFXXXXX 81
+CD C V+CR+D+A LC CD VH+AN ++ RH R VCE C PA+
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDE 63
Query: 82 XXXXXXXXXXXIHSA-NPLASRHH-RVPILPISGC 114
H N + HH R I SGC
Sbjct: 64 RVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGC 98
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVW------------VCEACE 70
CD C +VFC AD A LC GCD QVH AN++AS+H R +C+ C+
Sbjct: 5 CDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLCDICQ 64
Query: 71 CAPAAFXXXXXXXXXXXXXXXXIHSANPLASRHHR 105
A IH+AN +H R
Sbjct: 65 DKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDR 99
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 6 LFTSTSTTTVKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHER 62
L+ S+S T+ +CD C+ +FC+ D A LC CD+ +HAAN +H+R
Sbjct: 48 LYPSSSNTSSP-----LCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDR 99
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV--------CEACECAP 73
+CD C +A +FC AD A LC CD +VH N++ASRH RV + C+ CE AP
Sbjct: 4 LCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICENAP 63
Query: 74 AAF 76
A F
Sbjct: 64 AFF 66
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 6 LFTSTSTTTVKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV 65
+ TST+ + V C+ C T +FCRAD+A LC CD VH+AN ++ +H R +
Sbjct: 1 MGTSTTESVV------ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI 54
Query: 66 CEACECAPAAFXXXXXXXXXXXXXXXXIHSANPLASRHHRVPILPISGC 114
C+ C P + +H + ++ H R + SGC
Sbjct: 55 CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGC 103
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Query: 6 LFTSTSTTTVKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV 65
+ TST+ + V C+ C T +FCRAD+A LC CD VH+AN ++ +H R +
Sbjct: 1 MGTSTTESVV------ACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI 54
Query: 66 CEACECAPAAFXXXXXXXXXXXXXXXXIHSANPLASRHHRVPILPISGC 114
C+ C P + +H + ++ H R + SGC
Sbjct: 55 CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGC 103
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAA 75
CD C + ++C++DSA LC CD VH+AN ++ RH R +CE C P A
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTA 57
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPA 74
+CD C V+CR+D+A LC CD VH+AN ++ RH R VCE C PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPA 74
+CD C V+CR+D+A LC CD VH+AN ++ RH R VCE C PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPA 74
+CD C V+CR+D+A LC CD VH+AN ++ RH R VCE C PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 22 VCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPA 74
+CD C V+CR+D+A LC CD VH+AN ++ RH R VCE C PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWVCEACECAPAAF 76
CD C ++ ++C++D A LC CD VH+AN ++ RH R +CE C PAA
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAI 58
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV 65
CD C A T+ C AD A LCA CD +VHAAN++AS+H+R+++
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFL 47
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 13 TTVKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERV 63
V AK R CD+C +C AD A+LC CD+ VH+AN +A RHERV
Sbjct: 7 NAVGAKTARACDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERV 57
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV---------CEACECAP 73
CD C A TV C AD A LC CD ++HAAN++AS+H+R+ + C+ C+
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 74 AAFXXXXXXXXXXXXXXXXIHSANPLASRHHR 105
A IH AN ++ H R
Sbjct: 65 AFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%)
Query: 13 TTVKAKFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERV 63
+ V K R CD+C +C AD A+LC CD VH+AN +A RHERV
Sbjct: 7 SAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERV 57
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 5 DLFTSTSTTTVKAKFPRVCDTC-RSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERV 63
D+ + T++ T + R CD C + + + +C AD A+LC CDA +H+AN +A RHERV
Sbjct: 4 DVESRTASVTGEKMAARGCDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERV 63
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 27/45 (60%)
Query: 329 DREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRT 373
+REARVLRY IRY RK AE RPRIKGRF KRT
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 23 CDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERVWV---------CEACECAP 73
CD C A TV C AD A LC CD ++HAAN++AS+H+R+ + C+ C+
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 74 AAFXXXXXXXXXXXXXXXXIHSANPLASRHHR 105
A IH AN ++ H R
Sbjct: 65 AFIFCVEDRALLCRDCDESIHVANSRSANHQR 96
>AT1G49130.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175936 REVERSE LENGTH=326
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 18 KFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERV 63
K PR C+ C + +C +D A+LC CD VH+AN VA++HERV
Sbjct: 23 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERV 68
>AT1G49130.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:18174741-18175811 REVERSE LENGTH=319
Length = 319
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 18 KFPRVCDTCRSATCTVFCRADSAYLCAGCDAQVHAANRVASRHERV 63
K PR C+ C + +C +D A+LC CD VH+AN VA++HERV
Sbjct: 16 KQPRACELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERV 61