Miyakogusa Predicted Gene

Lj1g3v3101600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3101600.1 CUFF.30037.1
         (125 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G31730.1 | Symbols: GDU1 | glutamine dumper 1 | chr4:15361207...    62   1e-10
AT4G25760.1 | Symbols: ATGDU2, GDU2 | glutamine dumper 2 | chr4:...    61   2e-10
AT2G24762.1 | Symbols: AtGDU4, GDU4 | glutamine dumper 4 | chr2:...    60   3e-10
AT5G24920.1 | Symbols: AtGDU5, GDU5 | glutamine dumper 5 | chr5:...    57   2e-09
AT5G57685.1 | Symbols: ATGDU3, GDU3, LSB1 | glutamine dumper 3 |...    49   8e-07

>AT4G31730.1 | Symbols: GDU1 | glutamine dumper 1 |
           chr4:15361207-15361683 FORWARD LENGTH=158
          Length = 158

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 18/123 (14%)

Query: 1   MRPIN------SVPSSPSSTIHGV---KFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYR 51
           MRP++       V +S S   HGV     W SP+PYLFGG                CSY 
Sbjct: 1   MRPLSVQSKFEDVATSTSVNHHGVTPQSPWHSPVPYLFGGLAAMLGLIAFALLILACSYW 60

Query: 52  KRPSDSSSDSAEDMKQVMSKTNS-------EPEVLVIMAGDNKPTYLAKPITPSNYCTCG 104
           +  S    D     ++  S++         E + LVIMAG++ P YLA P      CTCG
Sbjct: 61  RLSSSGEEDGQNVDEEKESRSGDKAANGAYEEKFLVIMAGEDLPRYLATPAMKK--CTCG 118

Query: 105 GAE 107
           G E
Sbjct: 119 GHE 121


>AT4G25760.1 | Symbols: ATGDU2, GDU2 | glutamine dumper 2 |
           chr4:13116149-13116538 FORWARD LENGTH=129
          Length = 129

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 48/106 (45%), Gaps = 17/106 (16%)

Query: 7   VPSSPSSTIHGVKFWESPIPYLFGGXXXXXXXXXXXXXXXXCSYRK------RPSDSSSD 60
           VP SP         W SP+PYLFGG                CSY +      R  ++  D
Sbjct: 23  VPHSP---------WHSPVPYLFGGLAAMLALICVALLILACSYWRLSGSAERDLEAGDD 73

Query: 61  SAEDMKQVMSKTNSEPE-VLVIMAGDNKPTYLAKPITPSNY-CTCG 104
           +  D     +K    PE  LVIMAGD +PTYLA P T S   CTCG
Sbjct: 74  AKPDNDTNKTKHTEMPEKFLVIMAGDVRPTYLATPATRSEQSCTCG 119


>AT2G24762.1 | Symbols: AtGDU4, GDU4 | glutamine dumper 4 |
           chr2:10559479-10559949 FORWARD LENGTH=156
          Length = 156

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 54/123 (43%), Gaps = 21/123 (17%)

Query: 1   MRPINSVPSSPSSTIHGVKF------------WESPIPYLFGGXXXXXXXXXXXXXXXXC 48
           MRP++  P+S     H                W SP+PYLFGG                C
Sbjct: 1   MRPLSIKPTSLDVARHATSVESFGNHRPPISPWHSPVPYLFGGLAAMLGLIAFALLILAC 60

Query: 49  SYRKRPS--DSSSDSAEDMKQVMSKTNS-----EPEVLVIMAGDNKPTYLAKPITPSNYC 101
           SY +  +  D S +  ++ K+  S   +     E +VLVIMAGD+ P +LA P   +N C
Sbjct: 61  SYWRLSTSGDDSGERVDEEKESRSGVKAASAACEEKVLVIMAGDDLPRFLATP--AANKC 118

Query: 102 TCG 104
            CG
Sbjct: 119 MCG 121


>AT5G24920.1 | Symbols: AtGDU5, GDU5 | glutamine dumper 5 |
           chr5:8584665-8585060 FORWARD LENGTH=131
          Length = 131

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 21  WESPIPYLFGGXXXXXXXXXXXXXXXXCSYRK--RPSDSSSDSAEDMKQVMSKTNSEPEV 78
           W +P+PYLFGG                CSY +  R ++      E  ++V++K   E ++
Sbjct: 28  WRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEEKQTESGEKVVAKA-FEEKI 86

Query: 79  LVIMAGDNKPTYLAKPITPSNYCTCGGAE 107
           LVIMAG N PT+LA P+       C   E
Sbjct: 87  LVIMAGQNNPTFLATPVAAKICLDCVNME 115


>AT5G57685.1 | Symbols: ATGDU3, GDU3, LSB1 | glutamine dumper 3 |
           chr5:23366356-23366802 REVERSE LENGTH=148
          Length = 148

 Score = 48.9 bits (115), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 14/95 (14%)

Query: 21  WESPIPYLFGGXXXXXXXXXXXXXXXXCSYRKRPSDSSSDSAEDMKQVMSKTNSEPE--- 77
           W SP+PYLFGG                CSY +       +  +  ++ +   + +P+   
Sbjct: 28  WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLEVGDVKPDKTA 87

Query: 78  ---------VLVIMAGDNKPTYLAKPITPSNYCTC 103
                     LVIMAG+ KPTYLA P   +  CTC
Sbjct: 88  VKPVALPEKFLVIMAGNVKPTYLATPSVKT--CTC 120