Miyakogusa Predicted Gene
- Lj1g3v3090480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3090480.1 tr|G7J2G3|G7J2G3_MEDTR Sodium-coupled neutral
amino acid transporter OS=Medicago truncatula
GN=MTR_3,47.67,0.000000000000005,AMINO ACID TRANSPORTER,NULL;
Aa_trans,Amino acid transporter, transmembrane; seg,NULL,CUFF.30057.1
(466 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G30390.2 | Symbols: | Transmembrane amino acid transporter f... 553 e-157
AT3G30390.1 | Symbols: | Transmembrane amino acid transporter f... 553 e-157
AT5G38820.1 | Symbols: | Transmembrane amino acid transporter f... 548 e-156
AT3G56200.1 | Symbols: | Transmembrane amino acid transporter f... 303 2e-82
AT1G80510.1 | Symbols: | Transmembrane amino acid transporter f... 302 3e-82
AT2G40420.1 | Symbols: | Transmembrane amino acid transporter f... 291 6e-79
AT2G42005.1 | Symbols: | Transmembrane amino acid transporter f... 49 7e-06
>AT3G30390.2 | Symbols: | Transmembrane amino acid transporter
family protein | chr3:11977112-11978827 REVERSE
LENGTH=460
Length = 460
Score = 553 bits (1424), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/451 (62%), Positives = 330/451 (73%), Gaps = 3/451 (0%)
Query: 16 RRNKAVVVDE-KAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLK 74
RRN + ++ APLLP+ H +E D+FNGASFSGAVFNL+TTIIGAGIMALPAT+K
Sbjct: 12 RRNSSTCSNDIAAPLLPECHGDE--VAHDEFNGASFSGAVFNLATTIIGAGIMALPATMK 69
Query: 75 QLGMIPGLLAIVLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVN 134
LG+ G+ IV+MA LT+ SIE LLRF++AGK SY GLMG SFG G+ L Q+ V+VN
Sbjct: 70 ILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGLMGGSFGNPGRILLQVAVLVN 129
Query: 135 NIGVLIVYMIIIGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSF 194
NIGVLIVYMIIIGDVL+G + G HH G+LEGWFG WW GR I+L+TT+ +FAPL+ F
Sbjct: 130 NIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHHWWNGRAAILLITTLGVFAPLACF 189
Query: 195 KRIDSLKFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPRLFPAVTDLTSIFKLFTVVP 254
KRIDSLKFTS MPRL P VTDLTS + LFTVVP
Sbjct: 190 KRIDSLKFTSALSVALAVVFLIITAGISIMKLISGGVAMPRLLPDVTDLTSFWNLFTVVP 249
Query: 255 VFVTAYICHYNVHSIDNELEDSSQMQGVVRAALGLCSSVYVMISXXXXXXXXXXXXXXVL 314
V VTA+ICHYNVHSI NELED SQ++ VVR+AL LCSSVY+M S VL
Sbjct: 250 VLVTAFICHYNVHSIQNELEDPSQIRPVVRSALMLCSSVYIMTSIFGFLLFGDDTLDDVL 309
Query: 315 ANFDTNLGIPFGSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLSNFRF 374
ANFDT+LGIPFGS+LNDAVR+SYALHLMLVFP+VFYPLR+NIDGLLF S+R L SN RF
Sbjct: 310 ANFDTDLGIPFGSILNDAVRVSYALHLMLVFPIVFYPLRINIDGLLFPSARSLSTSNVRF 369
Query: 375 ASLTVALIGVILLGANLIPSIWEDFQFTGATDAVCIGFIFPAAITLRDRYNIATKSDKIL 434
LT LI VI LGAN IPSIW+ FQFTGAT AVC+GFIFPA+I L+DR++ AT D L
Sbjct: 370 GCLTAGLISVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPASIILKDRHDKATNRDTTL 429
Query: 435 SVILIVLAVFSNVVAIYSDAYALIKQNKTSK 465
++ +IVLAV SN +AIYSDAYAL K+N +
Sbjct: 430 AIFMIVLAVLSNAIAIYSDAYALFKKNAPRE 460
>AT3G30390.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr3:11977112-11978827 REVERSE
LENGTH=460
Length = 460
Score = 553 bits (1424), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/451 (62%), Positives = 330/451 (73%), Gaps = 3/451 (0%)
Query: 16 RRNKAVVVDE-KAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLK 74
RRN + ++ APLLP+ H +E D+FNGASFSGAVFNL+TTIIGAGIMALPAT+K
Sbjct: 12 RRNSSTCSNDIAAPLLPECHGDE--VAHDEFNGASFSGAVFNLATTIIGAGIMALPATMK 69
Query: 75 QLGMIPGLLAIVLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVN 134
LG+ G+ IV+MA LT+ SIE LLRF++AGK SY GLMG SFG G+ L Q+ V+VN
Sbjct: 70 ILGLGLGITMIVVMAFLTDASIEFLLRFSKAGKNRSYGGLMGGSFGNPGRILLQVAVLVN 129
Query: 135 NIGVLIVYMIIIGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSF 194
NIGVLIVYMIIIGDVL+G + G HH G+LEGWFG WW GR I+L+TT+ +FAPL+ F
Sbjct: 130 NIGVLIVYMIIIGDVLAGKTEDGIHHFGVLEGWFGHHWWNGRAAILLITTLGVFAPLACF 189
Query: 195 KRIDSLKFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPRLFPAVTDLTSIFKLFTVVP 254
KRIDSLKFTS MPRL P VTDLTS + LFTVVP
Sbjct: 190 KRIDSLKFTSALSVALAVVFLIITAGISIMKLISGGVAMPRLLPDVTDLTSFWNLFTVVP 249
Query: 255 VFVTAYICHYNVHSIDNELEDSSQMQGVVRAALGLCSSVYVMISXXXXXXXXXXXXXXVL 314
V VTA+ICHYNVHSI NELED SQ++ VVR+AL LCSSVY+M S VL
Sbjct: 250 VLVTAFICHYNVHSIQNELEDPSQIRPVVRSALMLCSSVYIMTSIFGFLLFGDDTLDDVL 309
Query: 315 ANFDTNLGIPFGSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLSNFRF 374
ANFDT+LGIPFGS+LNDAVR+SYALHLMLVFP+VFYPLR+NIDGLLF S+R L SN RF
Sbjct: 310 ANFDTDLGIPFGSILNDAVRVSYALHLMLVFPIVFYPLRINIDGLLFPSARSLSTSNVRF 369
Query: 375 ASLTVALIGVILLGANLIPSIWEDFQFTGATDAVCIGFIFPAAITLRDRYNIATKSDKIL 434
LT LI VI LGAN IPSIW+ FQFTGAT AVC+GFIFPA+I L+DR++ AT D L
Sbjct: 370 GCLTAGLISVIFLGANFIPSIWDAFQFTGATAAVCLGFIFPASIILKDRHDKATNRDTTL 429
Query: 435 SVILIVLAVFSNVVAIYSDAYALIKQNKTSK 465
++ +IVLAV SN +AIYSDAYAL K+N +
Sbjct: 430 AIFMIVLAVLSNAIAIYSDAYALFKKNAPRE 460
>AT5G38820.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr5:15543481-15545182 FORWARD
LENGTH=456
Length = 456
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/442 (62%), Positives = 330/442 (74%), Gaps = 4/442 (0%)
Query: 22 VVDEKAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPG 81
+V+ APLL +S E + G +FNGASFSGAVFNL+TTIIGAGIMALPAT+K LG+IPG
Sbjct: 11 IVESTAPLLQESSSESNGGG--EFNGASFSGAVFNLATTIIGAGIMALPATMKILGLIPG 68
Query: 82 LLAIVLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIV 141
+ IVLMA LT+ SIE LLRF+ G SY G+M DSFGK G+ + Q+ ++V+NIGVLIV
Sbjct: 69 ITIIVLMAFLTDASIEFLLRFSNIGNQRSYGGVMDDSFGKCGRIMLQVSILVSNIGVLIV 128
Query: 142 YMIIIGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSFKRIDSLK 201
YMIIIGDVL+G + G HH+G+LEGWFG+ WW RTF++L+TT+ +FAPL+ FKRIDSL+
Sbjct: 129 YMIIIGDVLAGKNEYGIHHAGMLEGWFGISWWNRRTFVLLVTTLTVFAPLTCFKRIDSLR 188
Query: 202 FTSXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPRLFPAVTDLTSIFKLFTVVPVFVTAYI 261
FTS MPRL P VTDL+S +KLFTVVPV V AYI
Sbjct: 189 FTSAISVALAVVFLVITAGITIIKLFTDGLMMPRLLPNVTDLSSFWKLFTVVPVLVNAYI 248
Query: 262 CHYNVHSIDNELEDSSQMQGVVRAALGLCSSVYVMISXXXXXXXXXXXXXXVLANFDTNL 321
CHYNVHSI NELED S+++ VVR+AL +CSSVYVM S VLANFDT+L
Sbjct: 249 CHYNVHSIQNELEDPSRIKPVVRSALAMCSSVYVMTSLFGYLLFGDGTLDDVLANFDTDL 308
Query: 322 GIPFGSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLV--LSNFRFASLTV 379
GIPFGSVLNDAVR SYA HLMLVFPVVFYPLR+NIDGL+F ++ PL S+ RF S+T
Sbjct: 309 GIPFGSVLNDAVRFSYAAHLMLVFPVVFYPLRINIDGLIFPTAPPLTSSESDLRFGSITA 368
Query: 380 ALIGVILLGANLIPSIWEDFQFTGATDAVCIGFIFPAAITLRDRYNIATKSDKILSVILI 439
LI VI LGAN IPSIW+ FQFTGAT AVCIGFIFPAA+ L+DR+N ATK DK +++ +I
Sbjct: 369 GLIAVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAVILKDRHNQATKRDKTIAICMI 428
Query: 440 VLAVFSNVVAIYSDAYALIKQN 461
VLAVFSN +AIYSDAYAL K++
Sbjct: 429 VLAVFSNAIAIYSDAYALFKKH 450
>AT3G56200.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr3:20850087-20851779 FORWARD
LENGTH=435
Length = 435
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 248/432 (57%), Gaps = 5/432 (1%)
Query: 26 KAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAI 85
K LLPK S+ +G+S SG VFN+ST+IIGAGIM++PA K LG++P L I
Sbjct: 6 KTHLLPKQEPSSSEN-----HGSSTSGIVFNVSTSIIGAGIMSMPAAFKVLGIVPAFLII 60
Query: 86 VLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMII 145
++A L+ S+ L++ T AG++ +YAG+M +SFGK G QI +V G +I++ II
Sbjct: 61 TIIAWLSTISVGFLMKSTLAGESTTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSII 120
Query: 146 IGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSFKRIDSLKFTSX 205
IGDVLSG GG H G+L+ WFG WW R F +L + PL +R++ L +S
Sbjct: 121 IGDVLSGNENGGPEHIGVLQEWFGSYWWNTRIFALLFVYGFVLLPLVLRRRVERLAISSA 180
Query: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXTMPRLFPAVTDLTSIFKLFTVVPVFVTAYICHYN 265
PRLFP +++ S ++LFT PV VTA+ H+N
Sbjct: 181 VSFLLAVLFVVISSVLAISALVNGQTKNPRLFPELSNGGSFWQLFTASPVIVTAFTFHFN 240
Query: 266 VHSIDNELEDSSQMQGVVRAALGLCSSVYVMISXXXXXXXXXXXXXXVLANFDTNLGIPF 325
VH I EL+D Q+ + ++ LC+++Y +L NFD + G
Sbjct: 241 VHPIGFELKDPLQVIPATKISVILCAAIYFATGLFGYLLFGDATMSDILVNFDQSSGSSI 300
Query: 326 GSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLSNFRFASLTVALIGVI 385
GS+LND VR+SY LHLMLVFP++ + LR N+D LL+ L RF LT+AL+
Sbjct: 301 GSLLNDIVRLSYVLHLMLVFPLLNFSLRANLDELLYPKKPSLEKDTKRFIGLTLALLICC 360
Query: 386 LLGANLIPSIWEDFQFTGATDAVCIGFIFPAAITLRDRYNIATKSDKILSVILIVLAVFS 445
L A +P IW FQF G+T V I FIFPAAI LR+ + ++T +KI++ I++VLAV +
Sbjct: 361 FLSAIAVPDIWYFFQFMGSTITVSIAFIFPAAIVLRNIHGVSTSREKIVAAIMLVLAVAT 420
Query: 446 NVVAIYSDAYAL 457
+++AI ++ Y+L
Sbjct: 421 SIIAISTNLYSL 432
>AT1G80510.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr1:30273100-30274569 FORWARD
LENGTH=489
Length = 489
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 242/416 (58%), Gaps = 8/416 (1%)
Query: 46 NGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIVLMALLTEKSIELLLRFTRA 105
G+ GAVFNL+T+IIGAGIMALPAT+K LG++ G + I+LMALL+E S+ELL+RF+
Sbjct: 73 QGSGIYGAVFNLTTSIIGAGIMALPATMKVLGLVLGFVLIILMALLSEISVELLVRFSVL 132
Query: 106 GKAVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSAGGDHHSGILE 165
K+ SY ++ + GK + L++IC+IVNN GVL+VY+II+GDV+SG+ HH G+L+
Sbjct: 133 YKSKSYGEVVQFALGKTARVLSEICIIVNNGGVLVVYLIIMGDVMSGSL----HHIGVLD 188
Query: 166 GWFGVQWWTGRTFIVLLTTVAIFAPLSSFKRIDSLKFTSXXXXXXXXXXXXXXXXXXXXX 225
W G +W R ++L+ V APL + +IDSL TS
Sbjct: 189 QWLGNGFWDHRKVLILIVMVIFLAPLCALNKIDSLSVTSAASVALAVVFVVVCFVVATIK 248
Query: 226 XXXXXXTMPRLFPAVTDLTSIFKLFTVVPVFVTAYICHYNVHSIDNELEDSS--QMQGVV 283
PRL P +I L V+P+ AY+CH+NV I NELE S +M V
Sbjct: 249 LIEGTIDPPRLSPDFGSKQAILDLLVVIPIMSNAYVCHFNVQPIYNELEGRSPHKMNRVG 308
Query: 284 RAALGLCSSVYVMISXXXXXXXXXXXXXXVLANFDTNLGIPFGSVLNDAVRISYALHLML 343
R +C VY + +L NFD +LGI F S +N VRI Y LHL+L
Sbjct: 309 RITTAICVVVYASTAVSGYLLFGKDTESDILTNFDQDLGIRFSSAVNYIVRIGYILHLVL 368
Query: 344 VFPVVFYPLRLNIDGLLFSSSRPLVLSNFRFASLTVALIGVILLGANLIPSIWEDFQFTG 403
VFPV+ + LR ++ LLF S PL S R LTV L+ +I +G+ +IP+IW F+FTG
Sbjct: 369 VFPVIHFSLRETVNTLLFEGSPPLSESKKRSLGLTVVLLALIYIGSTMIPNIWTAFKFTG 428
Query: 404 ATDAVCIGFIFPAAITLR--DRYNIATKSDKILSVILIVLAVFSNVVAIYSDAYAL 457
AT AV +GF FPA I LR + N + ++ +S ++++LAV ++V + Y+L
Sbjct: 429 ATSAVSLGFTFPALIALRLGKQSNSLSFVERSVSWLMLILAVVVSIVGTIGNIYSL 484
>AT2G40420.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr2:16877300-16878982 FORWARD
LENGTH=440
Length = 440
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 178/439 (40%), Positives = 249/439 (56%), Gaps = 5/439 (1%)
Query: 26 KAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAI 85
KAPLLP +E + + N SF+GAVFN+ST+I+GAGIMA+PA K LG+IP L I
Sbjct: 6 KAPLLPN---QEPSSSSSE-NHGSFAGAVFNISTSIVGAGIMAIPAAFKVLGVIPSLSII 61
Query: 86 VLMALLTEKSIELLLRFTRAGKAVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMII 145
V++A L+ S L++ + AG++ +YAG+M +SFGK G + +V G +I++ II
Sbjct: 62 VIIAWLSNVSAGFLMKSSLAGESTTYAGVMKESFGKSGAVAVTVVTMVVTFGSMIIFSII 121
Query: 146 IGDVLSGTSAGGDHHSGILEGWFGVQWWTGRTFIVLLTTVAIFAPLSSFKRIDSLKFTSX 205
IGDV+SG G H G+L+ WFG WW R F +L V +F PL +R++ L F+S
Sbjct: 122 IGDVISGNEKDGIIHLGLLQEWFGSHWWNTRFFGLLFIFVFLFLPLVLCRRVERLAFSSA 181
Query: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXTMPRLFPAVTD-LTSIFKLFTVVPVFVTAYICHY 264
PRLFP + D S F LFT PV VTA+ H+
Sbjct: 182 ISFLLALLFVVISSVLAIIALVQGKTKPPRLFPELNDGGLSFFSLFTASPVIVTAFTFHF 241
Query: 265 NVHSIDNELEDSSQMQGVVRAALGLCSSVYVMISXXXXXXXXXXXXXXVLANFDTNLGIP 324
NVH + EL+D + R ++ LC+++Y VL NFD +
Sbjct: 242 NVHPVAFELKDPLNVLSATRISVILCATIYSATGLFCYLLFGDSTMTDVLMNFDQSTSSS 301
Query: 325 FGSVLNDAVRISYALHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLSNFRFASLTVALIGV 384
GS+LND VR+SYA+HLMLVFP++ + LR N+D LLF LV N RF +LT L+
Sbjct: 302 VGSLLNDIVRLSYAIHLMLVFPLLNFSLRANLDELLFPMKLSLVEDNKRFFALTFPLLIS 361
Query: 385 ILLGANLIPSIWEDFQFTGATDAVCIGFIFPAAITLRDRYNIATKSDKILSVILIVLAVF 444
LGA IP IW FQF G+T V I FIFPAAI LR+ +T +KI++ +++VLAV
Sbjct: 362 CFLGAIAIPDIWYFFQFLGSTSTVSIAFIFPAAIVLRNVNGFSTLREKIVASVMLVLAVA 421
Query: 445 SNVVAIYSDAYALIKQNKT 463
++++AI ++ Y +T
Sbjct: 422 TSIIAISTNIYTFTATEET 440
>AT2G42005.1 | Symbols: | Transmembrane amino acid transporter
family protein | chr2:17531323-17532564 REVERSE
LENGTH=413
Length = 413
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 16/134 (11%)
Query: 25 EKAPLLPKSHVEESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLA 84
E PLL K S F F N+ I+GAG++ LP K+ G + GLL
Sbjct: 11 EDTPLLGKGRPLSSK--FKTFA---------NVFIAIVGAGVLGLPYAFKRTGWLMGLLT 59
Query: 85 IVLMALLTEKSIELLLRFTRAGKAVSYAGLMGD----SFGKYGKALAQICVIVNNIGVLI 140
+ +A L + LL+ R VS G GD + G G+ + I +I++ G +
Sbjct: 60 LFSVAALINHCMMLLVHIRRK-LGVSNIGSFGDLGFAACGNLGRFVVDILIILSQAGFCV 118
Query: 141 VYMIIIGDVLSGTS 154
Y+I IG+ L+ S
Sbjct: 119 GYLIFIGNTLANLS 132