Miyakogusa Predicted Gene

Lj1g3v3089440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3089440.1 Non Chatacterized Hit- tr|Q01GP4|Q01GP4_OSTTA
Putative adaptor protein kanadaptin (ISS)
OS=Ostreococ,34.6,3e-18,coiled-coil,NULL; seg,NULL; SMAD NUCLEAR
INTERACTING PROTEIN 1,NULL; NUCLEAR INHIBITOR OF PROTEIN
PH,CUFF.30025.1
         (482 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38840.1 | Symbols:  | SMAD/FHA domain-containing protein  | ...   268   8e-72

>AT5G38840.1 | Symbols:  | SMAD/FHA domain-containing protein  |
           chr5:15551329-15554846 FORWARD LENGTH=735
          Length = 735

 Score =  268 bits (684), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 191/506 (37%), Positives = 262/506 (51%), Gaps = 82/506 (16%)

Query: 1   MEKIANMKKEINAIQVKDISXXXXXXXXXXXIARNEQRIAQVFXXXXXXXXXXXDSIRES 60
           +EKI +MKKE+ AI+ KDIS           IARNEQR A++            DSIRES
Sbjct: 288 LEKIGHMKKEVAAIRAKDISQGGLTQGQQTQIARNEQRTAELLEELENLEETLNDSIRES 347

Query: 61  LGARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTKKKPSHQKPGDSQSIETADTLLDKR 120
           LGA+T                            RT+KKPS +K  ++Q++ET D+L+DKR
Sbjct: 348 LGAKTGRKPTHGKKKGIVEDEEDLSSDEDDFYDRTQKKPSTKKGSENQTVETVDSLVDKR 407

Query: 121 DAMMKEINDKKELLMIEKNKLPSEGSTQDEVGDSLDA---YMTSVSSQLVYDKSAQLEKE 177
           D ++KEI  K E L+ EK+K+ +E  T+   GDSLDA   YMT +S+ LV DK+AQ+++E
Sbjct: 408 DNVLKEIEAKNEQLLTEKSKMETENVTEVTSGDSLDALDAYMTGLSTTLVQDKTAQIQQE 467

Query: 178 LSALQSELDRISYLLKIADPTGEAAKKRELKLQEPKPKNTEGVASTIKKPLAETPQSSEP 237
           LS LQSEL RI YLLKIADPTGE  KKRELK QE K K +E                  P
Sbjct: 468 LSTLQSELSRILYLLKIADPTGEEVKKRELKSQELKIKKSET-----------------P 510

Query: 238 CVKSDDKKPPKEAQKVGESCAKSNDHKP------LVEAQKDSESCVKAGDSMQEEKPAAI 291
            V+     P K+A          N+HK       LV+++   E   KA ++ +E+K    
Sbjct: 511 SVEKKINIPLKQAD--------PNEHKEKEVAKDLVDSENKPEVENKASETAEEKK---- 558

Query: 292 IVGSDKPQPGFDRLEAENAVFALPKPQWLGAVEDK-VTDDAQTLVAPPHLHETDESNQFV 350
                              V+   KPQWLG+  +K + ++    +       T++++ FV
Sbjct: 559 -----------------TTVYVPSKPQWLGSAANKAIIEEKNPEIVAATTDSTEDADGFV 601

Query: 351 DYKDRNKILGSSNDGGTSVQSKIESAAPGLIIRKRKQVESAGTNSNDASQQSNLGEQLAE 410
           DYK+R  I  ++  G   V         GLIIRKRKQ + +  + +   +Q+   E +A+
Sbjct: 602 DYKNRKNIALTATAGVEVVT--------GLIIRKRKQEDKSEEDDDSKEKQA---EVMAQ 650

Query: 411 DAVALLLKHQKGLYAXXXXXXXXGQQKRR--------------SKKVLGPAKPSFLSDEM 456
           DAVALLLKH  G +          Q++                +KKV+GP KP +L + +
Sbjct: 651 DAVALLLKHSVGHHVNEEDKELSKQEENNQGSGQSKTKKKKKTAKKVVGPDKPEYLDETI 710

Query: 457 DYDNTWVPPKGQSGDGRTSLNDKFGY 482
           DYD +WVPP GQSGDGRTSLND+ GY
Sbjct: 711 DYD-SWVPPAGQSGDGRTSLNDRLGY 735