Miyakogusa Predicted Gene

Lj1g3v3089430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3089430.1 tr|I1N4T1|I1N4T1_SOYBN DNA-directed RNA
polymerase (Fragment) OS=Glycine max PE=3
SV=1,81.11,0,RNA_POL_PHAGE_2,DNA-directed RNA polymerase, phage-type;
RNA_POL_PHAGE_1,DNA-directed RNA polymerase,CUFF.30026.1
         (727 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15700.2 | Symbols:  | DNA/RNA polymerases superfamily protei...  1058   0.0  
AT5G15700.1 | Symbols:  | DNA/RNA polymerases superfamily protei...  1057   0.0  
AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 | chr...  1048   0.0  
AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 | chr...  1041   0.0  
AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf...   960   0.0  
AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superf...   816   0.0  

>AT5G15700.2 | Symbols:  | DNA/RNA polymerases superfamily protein |
           chr5:5115572-5121609 REVERSE LENGTH=1051
          Length = 1051

 Score = 1058 bits (2736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/666 (73%), Positives = 578/666 (86%), Gaps = 1/666 (0%)

Query: 50  ESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQT 109
           E+ T +KE +KLRKKV +L+KKQK++AVR I++  + TKPW   +R KVGSRL+ELL++T
Sbjct: 318 ENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRT 377

Query: 110 AYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMV 169
           AYIQ P+DQ  +  PD+RPAFVH+F+ V K +  +GRK+G+IECDPL+ KGL++S +  V
Sbjct: 378 AYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 436

Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
           +PYMPMLVPP+ W+GYDKG +LFL SY+M+THG KQQREA+K APK QL+PVFEALDTLG
Sbjct: 437 MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 496

Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
            TKWRVNK+VL+VVDRIW+SGG +AD+VDR DVPLPE+PDT+DE  +             
Sbjct: 497 STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 556

Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
           N ER+SQRCD ELKL+VARKMKDEEAFYYPHN+DFRGRAYPM PHLNHLGSD+CRG+LEF
Sbjct: 557 NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 616

Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
           A+GRP+G SG +WLKIHLANLYAGGVDKLSL+GR++FTE+H+DDIFDSAD+PLEG RWWL
Sbjct: 617 AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 676

Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
            AEDPFQCLAVCI+LTEALRS SPET +SHIP+HQDGSCNGLQHYAALGRD LGA AVNL
Sbjct: 677 QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 736

Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
           VAGEKPADVYSGIA RVLDIMR DA +DP +FP+AL AR L+NQVDRKLVKQTVMTSVYG
Sbjct: 737 VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 796

Query: 530 VTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
           VTYIGAR+QIKRRLKER  F D+ ++FGA+CYAAKVTL A++EMFQ AR+IM W GECAK
Sbjct: 797 VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 856

Query: 590 VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNF 649
           +IASEN+ VRWTTPLGLPVVQPY ++G  ++KTSLQ L+LQ ETD+V+V+RQRTAFPPNF
Sbjct: 857 IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 916

Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
           +HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD +N ILR KFVELY  PILENL
Sbjct: 917 IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 976

Query: 710 LEGFQK 715
           LE F++
Sbjct: 977 LESFEQ 982


>AT5G15700.1 | Symbols:  | DNA/RNA polymerases superfamily protein |
           chr5:5115793-5121609 REVERSE LENGTH=1011
          Length = 1011

 Score = 1057 bits (2734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/666 (73%), Positives = 578/666 (86%), Gaps = 1/666 (0%)

Query: 50  ESATEIKEDEKLRKKVIDLMKKQKIAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQT 109
           E+ T +KE +KLRKKV +L+KKQK++AVR I++  + TKPW   +R KVGSRL+ELL++T
Sbjct: 318 ENETSMKEQDKLRKKVNELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRT 377

Query: 110 AYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEAKKTGRKFGIIECDPLILKGLDRSAKNMV 169
           AYIQ P+DQ  +  PD+RPAFVH+F+ V K +  +GRK+G+IECDPL+ KGL++S +  V
Sbjct: 378 AYIQSPADQQDNDLPDVRPAFVHTFK-VAKGSMNSGRKYGVIECDPLVRKGLEKSGRYAV 436

Query: 170 IPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLG 229
           +PYMPMLVPP+ W+GYDKG +LFL SY+M+THG KQQREA+K APK QL+PVFEALDTLG
Sbjct: 437 MPYMPMLVPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLG 496

Query: 230 HTKWRVNKKVLSVVDRIWASGGRLADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXE 289
            TKWRVNK+VL+VVDRIW+SGG +AD+VDR DVPLPE+PDT+DE  +             
Sbjct: 497 STKWRVNKRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKV 556

Query: 290 NRERYSQRCDIELKLAVARKMKDEEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEF 349
           N ER+SQRCD ELKL+VARKMKDEEAFYYPHN+DFRGRAYPM PHLNHLGSD+CRG+LEF
Sbjct: 557 NSERHSQRCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEF 616

Query: 350 ADGRPLGKSGRQWLKIHLANLYAGGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWL 409
           A+GRP+G SG +WLKIHLANLYAGGVDKLSL+GR++FTE+H+DDIFDSAD+PLEG RWWL
Sbjct: 617 AEGRPMGISGLRWLKIHLANLYAGGVDKLSLDGRLAFTENHLDDIFDSADRPLEGSRWWL 676

Query: 410 NAEDPFQCLAVCITLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNL 469
            AEDPFQCLAVCI+LTEALRS SPET +SHIP+HQDGSCNGLQHYAALGRD LGA AVNL
Sbjct: 677 QAEDPFQCLAVCISLTEALRSPSPETVLSHIPIHQDGSCNGLQHYAALGRDTLGAEAVNL 736

Query: 470 VAGEKPADVYSGIAARVLDIMRSDAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYG 529
           VAGEKPADVYSGIA RVLDIMR DA +DP +FP+AL AR L+NQVDRKLVKQTVMTSVYG
Sbjct: 737 VAGEKPADVYSGIATRVLDIMRRDADRDPEVFPEALRARKLLNQVDRKLVKQTVMTSVYG 796

Query: 530 VTYIGAREQIKRRLKERDVFSDDTKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAK 589
           VTYIGAR+QIKRRLKER  F D+ ++FGA+CYAAKVTL A++EMFQ AR+IM W GECAK
Sbjct: 797 VTYIGARDQIKRRLKERSDFGDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAK 856

Query: 590 VIASENQPVRWTTPLGLPVVQPYRKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNF 649
           +IASEN+ VRWTTPLGLPVVQPY ++G  ++KTSLQ L+LQ ETD+V+V+RQRTAFPPNF
Sbjct: 857 IIASENETVRWTTPLGLPVVQPYHQMGTKLVKTSLQTLSLQHETDQVIVRRQRTAFPPNF 916

Query: 650 VHSLDGSHMMMTAVACKQAGLAFAGVHDSYWTHACDVDDMNRILRGKFVELYETPILENL 709
           +HSLDGSHMMMTAVACK+AG+ FAGVHDS+WTHACDVD +N ILR KFVELY  PILENL
Sbjct: 917 IHSLDGSHMMMTAVACKRAGVCFAGVHDSFWTHACDVDKLNIILREKFVELYSQPILENL 976

Query: 710 LEGFQK 715
           LE F++
Sbjct: 977 LESFEQ 982


>AT1G68990.1 | Symbols: MGP3 | male gametophyte defective 3 |
           chr1:25935499-25940755 REVERSE LENGTH=976
          Length = 976

 Score = 1048 bits (2711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/694 (69%), Positives = 574/694 (82%), Gaps = 3/694 (0%)

Query: 25  QVRIHKFLEXXXXXXXXXXXXXEAGESATE---IKEDEKLRKKVIDLMKKQKIAAVRGIM 81
           +VRI+ FL+                E+ +E    KE EK RK+V  LM+K K+  V+ ++
Sbjct: 254 EVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALV 313

Query: 82  KDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA 141
           +  +  KPWG   + KVG+RL++LLM+ AYIQPP++Q  DG PDIRPAF  +FRTVT E 
Sbjct: 314 RKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLEN 373

Query: 142 KKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLFLPSYVMRTH 201
            KT R++G IECDPL+LKGLD+SA++MVIPY+PML+PP NWTGYD+G H FLPSYVMRTH
Sbjct: 374 TKTSRRYGCIECDPLVLKGLDKSARHMVIPYLPMLIPPQNWTGYDQGAHFFLPSYVMRTH 433

Query: 202 GVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLADLVDRDD 261
           G KQQR  +KR PK+QLEPV+EALDTLG+TKW++NKKVLS+VDRIWA+GGR+  LVDR+D
Sbjct: 434 GAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIGGLVDRED 493

Query: 262 VPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEEAFYYPHN 321
           VP+PEEP+ +D+ +             +N ER+SQRCDIELKL VARKMKDEE FYYPHN
Sbjct: 494 VPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEEGFYYPHN 553

Query: 322 VDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGGVDKLSLE 381
           VDFRGRAYP+HP+LNHLGSD+CRGILEF +G+PLGKSG +WLKIH+ANLYAGGVDKL+ E
Sbjct: 554 VDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGGVDKLAYE 613

Query: 382 GRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPETFISHIP 441
            R++FTESH++DIFDS+D+PLEG+RWWLNAEDPFQCLA CI L+EALRS  PE  ISHIP
Sbjct: 614 DRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPEAAISHIP 673

Query: 442 VHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDAQKDPAIF 501
           +HQDGSCNGLQHYAALGRDKLGA AVNLV GEKPADVY+ IAARVL IM+ DA++DP  F
Sbjct: 674 IHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDAEEDPETF 733

Query: 502 PDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTKLFGASCY 561
           P+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER  F DD+  F ASCY
Sbjct: 734 PNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSLTFHASCY 793

Query: 562 AAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRKLGRHIIK 621
           AAK+TL ALEEMF+ AR+I +W G+CAK+IASEN  V WTTPLGLPVVQPYRK GRH++K
Sbjct: 794 AAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRKPGRHLVK 853

Query: 622 TSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAGVHDSYWT 681
           T+LQ+LTL RETDKVM +RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAGVHDS+WT
Sbjct: 854 TTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAGVHDSFWT 913

Query: 682 HACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
           HACDVD MN ILR KFVELYE PILENLLE FQK
Sbjct: 914 HACDVDVMNTILREKFVELYEKPILENLLESFQK 947


>AT1G68990.2 | Symbols: MGP3 | male gametophyte defective 3 |
           chr1:25935499-25940755 REVERSE LENGTH=983
          Length = 983

 Score = 1041 bits (2693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/701 (68%), Positives = 574/701 (81%), Gaps = 10/701 (1%)

Query: 25  QVRIHKFLEXXXXXXXXXXXXXEAGESATE---IKEDEKLRKKVIDLMKKQKIAAVRGIM 81
           +VRI+ FL+                E+ +E    KE EK RK+V  LM+K K+  V+ ++
Sbjct: 254 EVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEKARKQVTVLMEKNKLRQVKALV 313

Query: 82  KDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHSFRTVTKEA 141
           +  +  KPWG   + KVG+RL++LLM+ AYIQPP++Q  DG PDIRPAF  +FRTVT E 
Sbjct: 314 RKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFDDGPPDIRPAFKQNFRTVTLEN 373

Query: 142 KKTGRKFGIIECDPLILKGLDRS-------AKNMVIPYMPMLVPPVNWTGYDKGGHLFLP 194
            KT R++G IECDPL+LKGLD+S       A++MVIPY+PML+PP NWTGYD+G H FLP
Sbjct: 374 TKTSRRYGCIECDPLVLKGLDKSVSRIVDYARHMVIPYLPMLIPPQNWTGYDQGAHFFLP 433

Query: 195 SYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGRLA 254
           SYVMRTHG KQQR  +KR PK+QLEPV+EALDTLG+TKW++NKKVLS+VDRIWA+GGR+ 
Sbjct: 434 SYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGNTKWKINKKVLSLVDRIWANGGRIG 493

Query: 255 DLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKDEE 314
            LVDR+DVP+PEEP+ +D+ +             +N ER+SQRCDIELKL VARKMKDEE
Sbjct: 494 GLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQNNERHSQRCDIELKLEVARKMKDEE 553

Query: 315 AFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYAGG 374
            FYYPHNVDFRGRAYP+HP+LNHLGSD+CRGILEF +G+PLGKSG +WLKIH+ANLYAGG
Sbjct: 554 GFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFCEGKPLGKSGLRWLKIHIANLYAGG 613

Query: 375 VDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSSPE 434
           VDKL+ E R++FTESH++DIFDS+D+PLEG+RWWLNAEDPFQCLA CI L+EALRS  PE
Sbjct: 614 VDKLAYEDRIAFTESHLEDIFDSSDRPLEGKRWWLNAEDPFQCLAACINLSEALRSPFPE 673

Query: 435 TFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRSDA 494
             ISHIP+HQDGSCNGLQHYAALGRDKLGA AVNLV GEKPADVY+ IAARVL IM+ DA
Sbjct: 674 AAISHIPIHQDGSCNGLQHYAALGRDKLGADAVNLVTGEKPADVYTEIAARVLKIMQQDA 733

Query: 495 QKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDDTK 554
           ++DP  FP+A +A+ +++QVDRKLVKQTVMTSVYGVTY GAR+QIK+RLKER  F DD+ 
Sbjct: 734 EEDPETFPNATYAKLMLDQVDRKLVKQTVMTSVYGVTYSGARDQIKKRLKERGTFEDDSL 793

Query: 555 LFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPYRK 614
            F ASCYAAK+TL ALEEMF+ AR+I +W G+CAK+IASEN  V WTTPLGLPVVQPYRK
Sbjct: 794 TFHASCYAAKITLKALEEMFEAARAIKSWFGDCAKIIASENNAVCWTTPLGLPVVQPYRK 853

Query: 615 LGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAFAG 674
            GRH++KT+LQ+LTL RETDKVM +RQ TAF PNF+HSLDGSHMMMTAVAC +AGL+FAG
Sbjct: 854 PGRHLVKTTLQVLTLSRETDKVMARRQMTAFAPNFIHSLDGSHMMMTAVACNRAGLSFAG 913

Query: 675 VHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
           VHDS+WTHACDVD MN ILR KFVELYE PILENLLE FQK
Sbjct: 914 VHDSFWTHACDVDVMNTILREKFVELYEKPILENLLESFQK 954


>AT2G24120.1 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
           superfamily protein | chr2:10249358-10254530 REVERSE
           LENGTH=993
          Length = 993

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/703 (63%), Positives = 555/703 (78%), Gaps = 10/703 (1%)

Query: 14  ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
           A +     +  +VRIH FL+              AG+S  E+KE + LRK+V  L+++++
Sbjct: 271 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 322

Query: 74  IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
           I     ++K +  TKPWG   + K+GSRL+ELL++ AY+QPP  Q  D  P+ RPAF H 
Sbjct: 323 IIDALKVVKSEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 381

Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
           F+TVTK    K  R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP  W GYDKGG+LF
Sbjct: 382 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 441

Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
           LPSY+MRTHG K+Q++A+K    K    VFEALDTLG+TKWRVN+ +L VV+R+WA GG 
Sbjct: 442 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 501

Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
           +A LV+R+DVP+PE+P ++D  ++             NRER+S RCD+ELKL+VARKMKD
Sbjct: 502 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 561

Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
           EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG  WLKIHLANLYA
Sbjct: 562 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 621

Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
           GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 622 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 681

Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
           P + ISH+P+HQDGSCNGLQHYAALGRD   AAAVNLVAGEKPADVYS I+ RV +IM+ 
Sbjct: 682 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 741

Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
           D+ KDP   P A  A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 742 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 801

Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
             LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 802 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 861

Query: 613 RKLGRHIIKTSLQMLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKQAGLAF 672
            +  RH+I+TSLQ+L LQRE + V V++QRTAFPPNFVHSLDG+HMMMTAVAC++AGL F
Sbjct: 862 CRSERHLIRTSLQVLALQREGNTVDVRKQRTAFPPNFVHSLDGTHMMMTAVACREAGLNF 921

Query: 673 AGVHDSYWTHACDVDDMNRILRGKFVELYETPILENLLEGFQK 715
           AGVHDSYWTHACDVD MNRILR KFVELY TPILE+LL+ FQ+
Sbjct: 922 AGVHDSYWTHACDVDTMNRILREKFVELYNTPILEDLLQSFQE 964


>AT2G24120.2 | Symbols: PDE319, SCA3 | DNA/RNA polymerases
           superfamily protein | chr2:10250139-10254530 REVERSE
           LENGTH=895
          Length = 895

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/624 (61%), Positives = 482/624 (77%), Gaps = 10/624 (1%)

Query: 14  ATLCCAYCLMLQVRIHKFLEXXXXXXXXXXXXXEAGESATEIKEDEKLRKKVIDLMKKQK 73
           A +     +  +VRIH FL+              AG+S  E+KE + LRK+V  L+++++
Sbjct: 271 AAVSIGIAIEQEVRIHNFLKRTRKN--------NAGDSQEELKEKQLLRKRVNSLIRRKR 322

Query: 74  IAAVRGIMKDQNDTKPWGPVMRTKVGSRLVELLMQTAYIQPPSDQIVDGSPDIRPAFVHS 133
           I     ++K +  TKPWG   + K+GSRL+ELL++ AY+QPP  Q  D  P+ RPAF H 
Sbjct: 323 IIDALKVVKSEG-TKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAFRHR 381

Query: 134 FRTVTK-EAKKTGRKFGIIECDPLILKGLDRSAKNMVIPYMPMLVPPVNWTGYDKGGHLF 192
           F+TVTK    K  R++G+IECD L+L GLD+SAK+M+IPY+PMLVPP  W GYDKGG+LF
Sbjct: 382 FKTVTKYPGSKLVRRYGVIECDSLLLAGLDKSAKHMLIPYVPMLVPPKRWKGYDKGGYLF 441

Query: 193 LPSYVMRTHGVKQQREAVKRAPKKQLEPVFEALDTLGHTKWRVNKKVLSVVDRIWASGGR 252
           LPSY+MRTHG K+Q++A+K    K    VFEALDTLG+TKWRVN+ +L VV+R+WA GG 
Sbjct: 442 LPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNILDVVERLWADGGN 501

Query: 253 LADLVDRDDVPLPEEPDTDDEAQIXXXXXXXXXXXXENRERYSQRCDIELKLAVARKMKD 312
           +A LV+R+DVP+PE+P ++D  ++             NRER+S RCD+ELKL+VARKMKD
Sbjct: 502 IAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCDVELKLSVARKMKD 561

Query: 313 EEAFYYPHNVDFRGRAYPMHPHLNHLGSDVCRGILEFADGRPLGKSGRQWLKIHLANLYA 372
           EE FYYPHN+DFRGRAYPMHPHLNHL SD+CRG LEFA+GRPLGKSG  WLKIHLANLYA
Sbjct: 562 EEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYA 621

Query: 373 GGVDKLSLEGRVSFTESHVDDIFDSADKPLEGRRWWLNAEDPFQCLAVCITLTEALRSSS 432
           GGV+KLS + R++F E+H+DDI DSA+ P+ G+RWWL AEDPFQCLA C+ LT+AL+S S
Sbjct: 622 GGVEKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPS 681

Query: 433 PETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRS 492
           P + ISH+P+HQDGSCNGLQHYAALGRD   AAAVNLVAGEKPADVYS I+ RV +IM+ 
Sbjct: 682 PYSVISHLPIHQDGSCNGLQHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKK 741

Query: 493 DAQKDPAIFPDALHARTLVNQVDRKLVKQTVMTSVYGVTYIGAREQIKRRLKERDVFSDD 552
           D+ KDP   P A  A+ L+ QVDRKLVKQTVMTSVYGVTY+GAREQIKRRL+E+ V +D+
Sbjct: 742 DSSKDPESNPTAALAKILITQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLEEKGVITDE 801

Query: 553 TKLFGASCYAAKVTLTALEEMFQGARSIMNWLGECAKVIASENQPVRWTTPLGLPVVQPY 612
             LF A+CY+AKVTL AL E+F+ AR+IM+WLG+CAK+IAS+N PVRW TPLGLPVVQPY
Sbjct: 802 RMLFAAACYSAKVTLAALGEIFEAARAIMSWLGDCAKIIASDNHPVRWITPLGLPVVQPY 861

Query: 613 RKLGRHIIKTSLQMLTLQRETDKV 636
            +  RH+I+TSLQ+L LQRE + V
Sbjct: 862 CRSERHLIRTSLQVLALQREGNTV 885