Miyakogusa Predicted Gene
- Lj1g3v3075110.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3075110.1 Non Chatacterized Hit- tr|I1L446|I1L446_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45359
PE,28.02,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.30011.1
(517 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-109
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-109
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 387 e-107
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 386 e-107
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 384 e-107
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 371 e-103
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 4e-91
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 332 5e-91
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 331 6e-91
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 328 5e-90
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 314 8e-86
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 308 8e-84
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 4e-83
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 278 6e-75
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 268 5e-72
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 4e-70
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 4e-70
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 1e-62
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 9e-61
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 3e-60
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 226 4e-59
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 224 8e-59
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 1e-58
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 218 7e-57
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 211 1e-54
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 205 7e-53
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 195 8e-50
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 192 3e-49
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 5e-48
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 189 6e-48
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 189 6e-48
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 188 7e-48
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 7e-48
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 5e-47
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 5e-47
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 182 5e-46
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 6e-46
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 178 7e-45
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 3e-42
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 165 5e-41
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 163 2e-40
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 162 4e-40
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 162 4e-40
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 4e-40
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 8e-40
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 8e-39
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 2e-37
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 6e-35
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 140 2e-33
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 3e-33
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 137 1e-32
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 3e-32
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 8e-31
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 131 1e-30
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 8e-30
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 128 1e-29
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 127 3e-29
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 127 3e-29
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 124 2e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 7e-28
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 121 9e-28
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 117 1e-26
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 117 3e-26
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 114 2e-25
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 113 2e-25
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 4e-25
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 110 2e-24
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 108 9e-24
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 105 5e-23
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 105 7e-23
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 103 4e-22
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 101 1e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 99 7e-21
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 97 2e-20
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 97 4e-20
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 96 7e-20
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 94 2e-19
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 94 2e-19
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 94 2e-19
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 93 3e-19
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 6e-19
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 92 6e-19
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 92 7e-19
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 92 1e-18
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 91 2e-18
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 89 6e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 1e-17
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 88 2e-17
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 87 2e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 87 3e-17
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 86 6e-17
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 82 1e-15
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 81 2e-15
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 80 3e-15
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 6e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 79 8e-15
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 79 9e-15
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 78 2e-14
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 75 8e-14
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 71 2e-12
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 69 6e-12
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 69 9e-12
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 67 4e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 66 7e-11
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 3e-10
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 62 7e-10
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 9e-10
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 60 3e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 60 3e-09
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT3G04260.1 | Symbols: PTAC3 | plastid transcriptionally active ... 56 7e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/541 (36%), Positives = 313/541 (57%), Gaps = 55/541 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
DD + +F ++ P P +I+F ++ +++ K K Y ++L Q+E GI ++ TL+I
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+INC+C ++ AFS + KI+K GY+PNTITF+TLI GLCL G+V AL+ D +V G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 150 FHLNQISYGTLINGLC-----------------------------------KMGQTRASL 174
+ I+ TL+NGLC K GQT ++
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+LLRK+E + +K D V Y+ IID LCK + +AFNL++EM I +++T+N LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ + LL +M+ + INP+V T+++L+D+F KEGK++EA + M+ +G+ P+
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+TYTSL+DG+C + ++KA +++ M +G PN++++N +ING CK +D+ L LF +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 355 MDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHH 394
M + +V +TVT+N+LI G C+ NI+TY LLD LC +
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+KA+ + +KI ++ D+ YNI++ G+C ++ +A ++ L KG V+TY I
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
MI GLCK+G EA L KME++G PD T+ +IRA G+ K+ KL+ E+ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 515 L 515
Sbjct: 609 F 609
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 242/465 (52%), Gaps = 15/465 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + + + +R++ M P +I ++ L + A+ L ++ G P+ VT
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++N C Q A +L K+ ++ + + + ++ +I GLC +G + A + + +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N I+Y LI G C G+ +LLR + + + P+VV ++ +IDS K+ + +A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ EM+ I P +T+ SLI GFC L +A ++D MV+K +P++ T+NIL++ +
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK ++ + + M +GV + VTY +L+ G+C + ++N AK + M R V PN+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+Y +++GLC ++AL +F +++ + + +I YN ++ +
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKM---------------ELDIGIYNIIIHGM 518
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
C + VD A L + +G++P V+TYNI++ GLC++G L A+ + + + G+
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
TY I+I +G +++ L+ +++ G DA T + +I L
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 190/362 (52%), Gaps = 15/362 (4%)
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
I + L + + K Q L L +++E K + ++ + +I+ C+ + AF+ +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
++ + P+ +TF++LI G C+ G++ EA+ L+D MV PD+ T N LV+ C GK
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
EA ++ M++ G +PN VTY +++ C + A +L M +R + + Y+
Sbjct: 209 EAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
+I+GLCK +D A NLF EM+ K I +NIITYN L+ C +
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGIT---------------TNIITYNILIGGFCNAGR 313
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
D L++ + + I P+V T+++L+D +EG+L+ A+E+ ++++ +G TYT
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+I+G CKE D+A ++ M GC P+ TF +I + +L R+M RG
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 515 LL 516
++
Sbjct: 434 VV 435
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 174/314 (55%), Gaps = 15/314 (4%)
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
D DA +L+ +M+ R LP+V+ F+ L Q +AL +M K I ++YT
Sbjct: 66 DIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYT 125
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+I+++ FC+ K+ A + + ++K G +PN +T+++L++G CL V++A +++ M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ G P++ + NT++NGLC EA+ L +M ++ C+ N +T
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM---------------VEYGCQPNAVT 230
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
Y +L+ +CKS A+ L++K+ ++ I+ D Y+I++DGLC+ G L NA + ++
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
KG + TY I+I G C G +D+ LL M P+ +TF +I + ++G+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 502 KAEKLLREMMARGL 515
+AE+L +EM+ RG+
Sbjct: 351 EAEELHKEMIHRGI 364
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 162/310 (52%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D+ ++FN + T II + ++ + L + I P++VT +
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+LI+ + + ++ A + +++ +G P+TIT+T+LI G C + A Q D +V++
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N ++ LING CK + L+L RK+ + V D V YNT+I C+ + A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EMV+ ++ P++VT+ L+ G C G+ ++A+ + +++ + D+ YNI++
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C KV +A ++ + +GVKP V TY ++ G C +++A+ + M + G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 329 VQSYNTMING 338
+YN +I
Sbjct: 578 GWTYNILIRA 587
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 1/232 (0%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I F ++ K + L ++ G+ D VT N LI +C ++ A +
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+++ + PN +T+ L+ GLC NG+ + AL+ + + L+ Y +I+G+C
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+ + L + K VKP V YN +I LCK +++A L+ +M P T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
+N LI G +++ L++E+ + D T +++D +G++K++
Sbjct: 581 YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS 631
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/542 (36%), Positives = 324/542 (59%), Gaps = 55/542 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD V +F +++ P P I+EF K+L+++ KM + ISL +++ I+ D+ + NI
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 90 LINCYCHQAQITSAFSVLAKILKKGY---------------------------------- 115
LINC+C ++Q+ A +VL K++K GY
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 116 -QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
QPNT+TF TLI GL L+ + A+ D +VA+G + +YGT++NGLCK G +L
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL+K+E ++ DVV+Y TIID+LC V DA NL++EM I P+VVT+NSLI
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ + INP+V T++ L+DAF KEGK+ EA + M+K+ + P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+SL++G+C+ +++AK++ M + PNV +YNT+I G CK K V+E + LF E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + +V NTVT+N+LI GL ++ +IITY+ LLD LCK
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + + ++ ++PD+ TYNI+++G+C+ G++++ ++ L KG V YT
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
MI+G C++GL +EA L +M+++G +P++ T+ T+IRA G+ + +L++EM + G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600
Query: 515 LL 516
+
Sbjct: 601 FV 602
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 214/418 (51%), Gaps = 17/418 (4%)
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
++ A + ++++ P+ + F L+ + + + + + + SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
LIN C+ Q +L +L K+ +PD+V +++++ C +++A L +M M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
P+ VTFN+LI+G + + EA+AL+D MV + PD++TY +V+ CK G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
++L M K ++ +VV YT+++D C VN A + M +G+ PNV +YN++I
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN-IITYNSLLDALCKSHHVDK 397
LC +A L ++M + I PN VTF++LID K ++ L D + K
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK------ 353
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
+ I PD+ TY+ L++G C RL A+ + + +++K V TY +I
Sbjct: 354 ----------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G CK +E + L +M G + + +T+ T+I+ LF+ G+ A+K+ ++M++ G+
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 183/346 (52%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NV+D +++F + P ++ + ++ L +S A L + I P++VT +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ + + ++ A + +++K+ P+ T+++LI G C++ ++ A + ++++
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N ++Y TLI G CK + ++L R++ + + + V YNT+I L + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ +MV+ + P ++T++ L+ G C G+L++A+ + + + + PD+YTYNI+++
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK GKV++ ++ + +GVKPNV+ YT+++ G+C +A + M + G PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+YNT+I + + L EM V + T + +I+ L
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 390 bits (1003), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 312/540 (57%), Gaps = 55/540 (10%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
DD V +F + R P P +I+F ++ + + + K Y + L Q+E GI ++ TL+I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF--------H 142
INC C +++ AFS + KI+K GY+P+T+TF+TLI GLCL G+V AL+ H
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 143 ---------------------------DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
D +V GF N+++YG ++ +CK GQT +++
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
LLRK+E + +K D V Y+ IID LCKD + +AFNL++EM ++ + +LI GFC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
G+ + LL +M+ + I PDV ++ L+D F KEGK++EA + M+++G+ P+ V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
TYTSL+DG+C ++++KA ++L+ M +G PN++++N +ING CK ++D+ L LF +M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 356 DCKNIVPNTVTFNSLIDGLC--------------------KSNIITYNSLLDALCKSHHV 395
+ +V +TVT+N+LI G C + +I++Y LLD LC +
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+KA+ + +KI ++ D+ YNI++ G+C ++ +A ++ L KG V+TY IM
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
I GLCK+G EA L KME++G P+ T+ +IRA +G+ K+ KL+ E+ G
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 239/466 (51%), Gaps = 15/466 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
V + + + +R++ M P +I ++ L S A+ L ++ TG P+ VT
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
++ C Q A +L K+ ++ + + + ++ +I GLC +G + A + + +
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF + I Y TLI G C G+ +LLR + + + PDVV ++ +ID K+ + +A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EM+ I P VT+ SLI GFC QL +A +LD MV+K P++ T+NIL++
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+CK + + + M +GV + VTY +L+ G+C + ++ AK + M R V P+
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+ SY +++GLC ++AL +F +++ + + +I YN ++
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKM---------------ELDIGIYNIIIHG 501
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
+C + VD A L + +G++PDV+TYNI++ GLC++G L A + + + G+
Sbjct: 502 MCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
TY I+I EG ++ L+ +++ G DA T + ++ L
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 172/329 (52%), Gaps = 21/329 (6%)
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD- 248
V Y + S D DA +L+ EM R P ++ F+ L F +V + K+ +LD
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRL---FSVVARTKQYDLVLDL 94
Query: 249 --EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
+M K I ++YT +I+++ C+ K+ A + + ++K G +P+ VT+++L++G CL
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
V++A +++ M + G P + + N ++NGLC V +A+ L M PN V
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEV- 213
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
TY +L +CKS A+ L++K+ ++ I+ D Y+I++DGLC+
Sbjct: 214 --------------TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
+G L NA + ++ KG+ + YT +I G C G +D+ LL M PD +
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGL 515
F +I ++G+ +AE+L +EM+ RG+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGI 348
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 324/544 (59%), Gaps = 55/544 (10%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I VDD V +F +++ P P I+EF K+L+++ KM + ISL Q++ GI+ D+ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 87 LNILINCYCHQAQITSAFSVLAKILK---------------------------------- 112
+I INC+C ++Q++ A +VLAK++K
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 113 -KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
GY+P+T TFTTLI GL L+ + A+ D +V +G + ++YGT++NGLCK G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+L LL+K+E ++ DVV+YNTIID LCK + DA NL++EM I P V T++SLI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
C G+ +A LL +M+ + INP+V T++ L+DAF KEGK+ EA + M+K+ +
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P++ TY+SL++G+C+ +++AK++ M + PNV +Y+T+I G CK K V+E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCK 391
F EM + +V NTVT+ +LI G ++ NI+TYN LLD LCK
Sbjct: 421 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+ + KA+ + + ++ ++PD+ TYNI+++G+C+ G++++ E+ +L KG V
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
Y MI+G C++G +EA +LL KM+++G +P++ T+ T+IRA G+ + +L++EM
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 512 ARGL 515
+ G
Sbjct: 601 SCGF 604
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 210/405 (51%), Gaps = 16/405 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D +S+ ++ + ++ + I+ L K KH A++L +++ GI PD+ T +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+C C+ + + A +L+ ++++ PN +TF+ LI G++ A + +D ++ +
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ +Y +LING C + + + + K P+VV Y+T+I CK V +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EM ++ + VT+ +LI+GF A + +MV+ ++P++ TYNIL+D
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK GK+ +A V + + ++P++ TY +++G C +V + ++ +GV+PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V +YNTMI+G C+ +EA +L +M +PN+ TYN+L+ A
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG---------------TYNTLIRA 582
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+ + + LIK++R G D T ++ + L +GRL +
Sbjct: 583 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/541 (36%), Positives = 321/541 (59%), Gaps = 55/541 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD V++F +++ P P IIEF K+L+++ KM + ISL Q++ GI + T +I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 90 LINCYCHQAQITSAFSVLAKILK-----------------------------------KG 114
LINC+C ++Q+ A +VL K++K G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
YQPNT+TF TLI GL L+ + A+ D +VA+G + ++YG ++NGLCK G T +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++P V++YNTIID LCK + DA NL+ EM I P+VVT++SLI
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ + INPDV+T++ L+DAF KEGK+ EA + M+K+ + P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VTY+SL++G+C+ +++AK + M + P+V +YNT+I G CK K V+E + +F E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + +V NTVT+N LI GL ++ NI+TYN+LLD LCK+
Sbjct: 422 MSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 481
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + + ++ ++P + TYNI+++G+C+ G++++ ++ +L KG V Y
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
MI+G C++G +EA L +M+++G +P++ + T+IRA G+ + +L++EM + G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 515 L 515
Sbjct: 602 F 602
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 231/510 (45%), Gaps = 90/510 (17%)
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
+ ++ A ++ +++K P+ I F+ L+ + + + + + G N +
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y LIN C+ Q +L +L K+ +P++V +++++ C +++A L +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG--- 273
P+ VTFN+LI+G + + EA+AL+D MV K PD+ TY ++V+ CK G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 274 --------------------------------KVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+ +A N+ M +G++PNVVTY+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
C + A +L+ M +R + P+V +++ +I+ K + EA L+ EM ++I
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 362 PNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIAL 401
P+ VT++SLI+G C +++TYN+L+ CK V++ + +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 402 IKKIRDQ-----------------------------------GIQPDVRTYNILMDGLCE 426
+++ + G+ P++ TYN L+DGLC+
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G+L+ A V + L T+ TY IMI G+CK G ++ L + G PD +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGLL 516
+ T+I KG +A+ L +EM G L
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 207/405 (51%), Gaps = 16/405 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+ D ++ N++ + P ++ + I+ L K KH A++L ++E GI P++VT +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+C C+ + + A +L+ ++++ P+ TF+ LI G++ A + +D +V +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++Y +LING C + + Q+ + K PDVV YNT+I CK V +
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ EM ++ + VT+N LI G G A + EMV+ + P++ TYN L+D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK GK+++A V + + ++P + TY +++G C +V + ++ +GV P+
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V +YNTMI+G C+ +EA LF EM +PN+ YN+L+ A
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG---------------CYNTLIRA 580
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+ + + LIK++R G D T ++ + L +GRL +
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 624
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 232/480 (48%), Gaps = 52/480 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ + V++ +++ P + F ++ L S A++L ++ G PD+VT +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++N C + AF++L K+ + +P + + T+I GLC + AL + +G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLL-----RKI----------------EGKLVK-- 186
N ++Y +LI+ LC G+ + +LL RKI EGKLV+
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 187 ------------PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
P +V Y+++I+ C + +A ++ MV+ P VVT+N+LI GF
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C +++E + + EM + + + TYNIL+ + G A + M+ GV PN+
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+TY +L+DG C ++ KA + + + + P + +YN MI G+CK V++ +LF
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
+ K + P+ V +N++I G C+ ++A AL K++++ G P+
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKG---------------SKEEADALFKEMKEDGTLPNS 571
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA-LTLLS 473
YN L+ +G + + E+I+++ + G+ T ++ N L +G D++ L +LS
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSFLDMLS 630
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 309/505 (61%), Gaps = 20/505 (3%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
DD +++F ++R P P +++F + +++ + K ++ + QLE GI +I TLNI+
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
INC+C + A+SVL K++K GY+P+T TF TLIKGL L G+V A+ D +V G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ ++Y +++NG+C+ G T +L LLRK+E + VK DV Y+TIIDSLC+D + A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
L+ EM I SVVT+NSL+ G C G+ + LL +MV++ I P+V T+N+L+D F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
KEGK++EA + M+ +G+ PN++TY +LMDGYC+ + +++A +L+ M + +P++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------- 377
++ ++I G C +K VD+ + +F + + +V N VT++ L+ G C+S
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 378 -------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+++TY LLD LC + ++KA+ + + ++ + + Y +++G+C+ G++
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
++A + L KG V TYT+MI+GLCK+G EA LL KME++G P+ T+ T+
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 491 IRALFEKGENYKAEKLLREMMARGL 515
IRA G+ + KL+ EM + G
Sbjct: 550 IRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 225/460 (48%), Gaps = 50/460 (10%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
S+ +++++ P F ++ L S A+ L ++ G PD+VT N ++N
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
C + A +L K+ ++ + + T++T+I LC +G + A+ + +G +
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKI---------------------EGKL--------- 184
++Y +L+ GLCK G+ LL+ + EGKL
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 185 -----VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
+ P+++ YNT++D C +++A N+ MV + P +VTF SLI G+C+V +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
+ + + + + + + + TY+ILV FC+ GK+K A + M+ GV P+V+TY
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
L+DG C ++ KA I + + + + Y T+I G+CK V++A NLF + CK
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 360 IVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
+ PN +T+ +I GLCK ++ +A L++K+ + G P+ TYN
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLS---------------EANILLRKMEEDGNAPNDCTYNT 548
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
L+ +G L + ++I+++ + G+ + ++I+ L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 180/365 (49%), Gaps = 55/365 (15%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
DA L+ EM+ R LPS+V F+ Q + ++ I ++YT NI++
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 267 DAFCK-----------------------------------EGKVKEATNVLAVMMKQGVK 291
+ FC+ EGKV EA ++ M++ G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P+VVTY S+++G C + + A +L M +R V +V +Y+T+I+ LC+ +D A++L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCK 391
F EM+ K I + VT+NSL+ GLCK+ N+IT+N LLD K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+ +A L K++ +GI P++ TYN LMDG C + RL A ++ ++ + T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+T +I G C D+ + + + G + +A+T+ +++ + G+ AE+L +EM+
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 512 ARGLL 516
+ G+L
Sbjct: 431 SHGVL 435
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 175/345 (50%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D +S+F + ++ + ++ L K ++ L + I P+++T N+
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ + + ++ A + +++ +G PN IT+ TL+ G C+ ++ A D +V
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +++ +LI G C + + +++ R I + + + V Y+ ++ C+ + A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ EMV+ +LP V+T+ L+ G C G+L++A+ + +++ ++ + Y +++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK GKV++A N+ + +GVKPNV+TYT ++ G C +++A +L M + G PN
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+YNT+I + + + L EM + + +ID L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 155/347 (44%), Gaps = 22/347 (6%)
Query: 40 LLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQ 99
++R +P I+ F ++ +K + + + G+ + VT +IL+ +C +
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 100 ITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
I A + +++ G P+ +T+ L+ GLC NG+++ AL+ + + L + Y T
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
+I G+CK G+ + L + K VKP+V+ Y +I LCK +++A L +M
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD-----------A 268
P+ T+N+LI G L + L++EM + + D + +++D
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLR 598
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+C K ++L + + ++ + +T+ + + + +N +N++ RG+ N
Sbjct: 599 YCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLN-----VNTIEARGM--N 651
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
N + L + L F D + +V N + L D C
Sbjct: 652 SAELNRDLRKLRR----SSVLKKFKNRDVRVLVTNELLTWGLEDAEC 694
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 116/240 (48%), Gaps = 15/240 (6%)
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K +A + M++ P++V ++ + N + G+ N+ + N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
MIN C+ A ++ ++ P+T TFN+LI GL L+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGL----------FLEG----- 172
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
V +A+ L+ ++ + G QPDV TYN +++G+C G A ++++ + + V TY+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+I+ LC++G D A++L +ME G +T+ +++R L + G+ LL++M++R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ VDD + +F + + + + ++ + A L ++ G+ PD++T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
IL++ C ++ A + + K + +TT+I+G+C G+V+ A +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G N ++Y +I+GLCK G + LLRK+E P+ YNT+I + +D +T
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 207 DAFNLYSEM 215
+ L EM
Sbjct: 561 ASAKLIEEM 569
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/538 (36%), Positives = 321/538 (59%), Gaps = 55/538 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD V++F +++ P P I+EF K+L+++ KM + ISL Q++ GI+ ++ T +I
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 90 LINCYCHQAQITSAFSVLAKILK-----------------------------------KG 114
LINC+C ++Q++ A +VLAK++K G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
YQP++ TF TLI GL + + A+ D +V +G + ++YG ++NGLCK G +L
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL+K+E ++P VV+YNTIID+LC V DA NL++EM I P+VVT+NSLI
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ + INP+V T++ L+DAF KEGK+ EA + M+K+ + P++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+SL++G+C+ +++AK++ M + PNV +YNT+I G CK K VDE + LF E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + +V NTVT+ +LI G ++ +I+TY+ LLD LC +
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
V+ A+ + + ++ ++PD+ TYNI+++G+C+ G++++ ++ L KG V TYT
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
M++G C++GL +EA L +M++ G +PD+ T+ T+IRA G+ + +L+REM +
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 230/467 (49%), Gaps = 29/467 (6%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDI--VTLNILINCYCHQAQITSAFSVLAKI 110
GK T+ H S + +F+G+ D +++N L + ++ A ++ +
Sbjct: 23 GKCGTAPPSFSHCSFWVR-----DFSGVRYDYRKISINRL-----NDLKLDDAVNLFGDM 72
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
+K P+ + F+ L+ + + + + + G N +Y LIN C+ Q
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+L +L K+ +PD+V N++++ C ++DA +L +MV M P TFN+L
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I+G + EA+AL+D MV K PD+ TY I+V+ CK G + A ++L M + +
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
+P VV Y +++D C VN A + M +G+ PNV +YN++I LC +A
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSN-IITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
L ++M + I PN VTF++LID K ++ L D + K +
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK----------------RS 356
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
I PD+ TY+ L++G C RL A+ + + +++K V TY +I G CK DE +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 470 TLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
L +M G + + +T+ T+I F+ E A+ + ++M++ G+L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ +F ++ P ++ + ++ K K + L ++ G+ + VT
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI+ + + +A V +++ G P+ +T++ L+ GLC NG+V+TAL +++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +Y +I G+CK G+ L + K VKP+VV Y T++ C+ L +A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+ EM LP T+N+LI G + L+ EM + D T ++ +
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 320/538 (59%), Gaps = 55/538 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ V +F +++ P P I+EF K+L+++ KMK + IS ++E G++ ++ T NI
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 90 LINCYCHQAQITSAFSVLAKILK-----------------------------------KG 114
+INC C ++Q++ A ++L K++K G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
YQP+T+TFTTL+ GL + + A+ + +V +G + ++YG +INGLCK G+ +L
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++ DVV+Y+T+IDSLCK V DA NL++EM I P V T++SLI
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ + INP+V T+N L+DAF KEGK+ EA + M+++ + PN+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VTY SL++G+C+ +++A+ I M + P+V +YNT+ING CK K V + + LF +
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + +V NTVT+ +LI G ++ NI+TYN+LLD LCK+
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + + ++ ++PD+ TYNI+ +G+C+ G++++ ++ L KG V Y
Sbjct: 466 LEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNT 525
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
MI+G CK+GL +EA TL KM+++G +PD+ T+ T+IRA G+ + +L++EM +
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 246/462 (53%), Gaps = 21/462 (4%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ + + V++ ++++ M P + F ++ L + S A++L ++ G PD+VT
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+IN C + + A ++L K+ K + + + ++T+I LC V AL +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G + +Y +LI+ LC G+ + +LL + + + P+VV +N++ID+ K+ + +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+ EM+ I P++VT+NSLI GFC+ +L EA + MV+K+ PDV TYN L++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
FCK KV + + M ++G+ N VTYT+L+ G+ S+ + A+ + M GV P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------- 377
N+ +YNT+++GLCK +++A+ +F + + P+ T+N + +G+CK+
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 378 ----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
++I YN+++ CK ++A L K+++ G PD TYN L+ +
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
G + E+I+++ + + TY ++ + L +G D+
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 223/447 (49%), Gaps = 21/447 (4%)
Query: 77 FTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQ 136
F+G++ D + N H ++ A + +++K P+ + F+ L+ + +
Sbjct: 24 FSGLSYDGYREKLSRNALLH-LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD 82
Query: 137 TALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTII 196
+ F + + G N +Y +IN LC+ Q +L +L K+ P +V N+++
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
+ C +++A L +MV M P VTF +L++G + EA+AL++ MV K
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
PD+ TY +++ CK G+ A N+L M K ++ +VV Y++++D C V+ A +
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
M +G+ P+V +Y+++I+ LC +A L ++M + I PN VTFNSLID K
Sbjct: 263 FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK 322
Query: 377 S--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
NI+TYNSL++ C +D+A + + + PDV T
Sbjct: 323 EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT 382
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
YN L++G C+ ++ + E+ +D+ +G TYT +I+G + D A + +M
Sbjct: 383 YNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 477 DNGCMPDAITFETIIRALFEKGENYKA 503
+G P+ +T+ T++ L + G+ KA
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEKA 469
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 309/541 (57%), Gaps = 55/541 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
DD V +F +++ P P +I+F ++ +++ K K Y ++L Q+E GI I TL+I
Sbjct: 69 ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNT------------------------------ 119
+INC+C +++ AFS + KI+K GY+P+T
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 120 -----ITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
IT TL+ GLCLNG+V A+ D +V GF N+++YG ++N +CK GQT ++
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+LLRK+E + +K D V Y+ IID LCKD + +AFNL++EM ++T+N+LI GF
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ + LL +M+ + I+P+V T+++L+D+F KEGK++EA +L MM++G+ PN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+TY SL+DG+C + + +A +++ M +G P++ ++N +ING CK +D+ L LF E
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + ++ NTVT+N+L+ G C+S +I++Y LLD LC +
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + KI ++ D+ Y I++ G+C ++ +A ++ L KG + R Y I
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
MI+ LC++ +A L KM + G PD +T+ +IRA + A +L+ EM + G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 515 L 515
Sbjct: 609 F 609
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 242/464 (52%), Gaps = 20/464 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + + + +R++ M P +I ++ L S A+ L ++ TG P+ VT
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++N C Q A +L K+ ++ + + + ++ +I GLC +G + A + + +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F + I+Y TLI G C G+ +LLR + + + P+VV ++ +IDS K+ + +A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L EM+ I P+ +T+NSLI GFC +L+EAI ++D M++K +PD+ T+NIL++ +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK ++ + + M +GV N VTY +L+ G+C ++ AK + M R V P++
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII--------- 380
SY +++GLC +++AL +F +++ + + + +I G+C ++ +
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 381 -----------TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
YN ++ LC+ + KA L +K+ ++G PD TYNIL+ +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
A E+I+++ + G+P V T ++IN L L L +LS
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLS 637
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 189/362 (52%), Gaps = 15/362 (4%)
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
I + L + + K Q L L +++E K + + + +I+ C+ ++ AF+ +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
++ + P V FN+L+ G C+ ++ EA+ L+D MV P + T N LV+ C GK
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
V +A ++ M++ G +PN VTY +++ C + A +L M +R + + Y+
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
+I+GLCK +D A NLF EM+ K K++IITYN+L+ C +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGF---------------KADIITYNTLIGGFCNAGR 313
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
D L++ + + I P+V T+++L+D +EG+L+ A +++++++ +G TY
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+I+G CKE +EA+ ++ M GC PD +TF +I + +L REM RG
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 515 LL 516
++
Sbjct: 434 VI 435
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 176/361 (48%), Gaps = 2/361 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D+ ++FN + II + ++ + L + I+P++VT +
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+LI+ + + ++ A +L +++++G PNTIT+ +LI G C +++ A+Q D ++++
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +++ LING CK + L+L R++ + V + V YNT++ C+ + A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EMV+ R+ P +V++ L+ G C G+L++A+ + ++ + D+ Y I++
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C KV +A ++ + +GVK + Y ++ C ++KA + M + G P+
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+YN +I A L EM + T +I+ L + S LD
Sbjct: 578 ELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL--DKSFLDM 635
Query: 389 L 389
L
Sbjct: 636 L 636
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 131/297 (44%), Gaps = 55/297 (18%)
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K +A ++ M++ P V+ + L + + M +G+ ++ + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------------------ 375
MIN C+ + + A + ++ P+TV FN+L++GLC
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 376 --KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP--------------------- 412
K +IT N+L++ LC + V A+ LI ++ + G QP
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 413 --------------DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
D Y+I++DGLC++G L NA + ++ KG+ + TY +I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
C G +D+ LL M P+ +TF +I + ++G+ +A++LL+EMM RG+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 110/240 (45%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ +++ + + + ++ P I+ F ++ K + L ++ G+ + VT
Sbjct: 382 NRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N L+ +C ++ A + +++ + +P+ +++ L+ GLC NG+++ AL+ +
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
L+ Y +I+G+C + + L + K VK D YN +I LC+ ++
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+ +M P +T+N LI A L++EM + DV T ++++
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/538 (36%), Positives = 311/538 (57%), Gaps = 55/538 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD + +F +++ P P I+EF K+L+++ KMK + ISL +++ I + T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 90 LINCYCHQAQITSAFSVLAKILK-----------------------------------KG 114
LINC+C ++QI+ A ++L K++K G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y+P+TITFTTLI GL L+ + A+ D +V +G N ++YG ++NGLCK G T +L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++ DVV++NTIIDSLCK V DA NL+ EM I P+VVT++SLI
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ K INP++ T+N L+DAF KEGK EA + M+K+ + P++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY SL++G+C+ ++KAK + M + P+V +YNT+I G CK K V++ LF E
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 355 MDCKNIVPNTVTFNSLIDGL-----CKS---------------NIITYNSLLDALCKSHH 394
M + +V +TVT+ +LI GL C + +I+TY+ LLD LC +
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + ++ I+ D+ Y +++G+C+ G++ + ++ L KG V TY
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
MI+GLC + L EA LL KM+++G +P++ T+ T+IRA G+ + +L+REM +
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 230/449 (51%), Gaps = 18/449 (4%)
Query: 27 IHN-VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIV 85
+HN + V++ +R+++ P ++ +G ++ L K A++L +++E I D+V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
N +I+ C + A ++ ++ KG +PN +T+++LI LC G+ A Q +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ + + N +++ LI+ K G+ + +L + + + PD+ YN++++ C +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A ++ MV+ P VVT+N+LI GFC ++++ L EM + + D TY L
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ +G A V M+ GV P+++TY+ L+DG C ++ KA + + M + +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
++ Y TMI G+CK VD+ +LF + K + PN VT+N++I GLC ++
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ---- 557
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+A AL+KK+++ G P+ TYN L+ +G + E+I+++ + +
Sbjct: 558 -----------EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 606
Query: 446 PVTVRTYTIMINGLCKEGLFDEA-LTLLS 473
T ++ N L +G D++ L +LS
Sbjct: 607 VGDASTIGLVANML-HDGRLDKSFLDMLS 634
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 183/380 (48%), Gaps = 55/380 (14%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
Y I+ + D + DA L+ MV R LPS+V FN L+ + + I+L ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC------ 305
I +YTYNIL++ FC+ ++ A +L MMK G +P++VT +SL++GYC
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 306 -----------------------------LVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
L ++ ++A +++ M QRG PN+ +Y ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-------------------- 376
NGLCK D ALNL +M+ I + V FN++ID LCK
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
N++TY+SL+ LC A L+ + ++ I P++ T+N L+D +EG+ A+++
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
D++ + + TY ++NG C D+A + M C PD +T+ T+I+ +
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 497 KGENYKAEKLLREMMARGLL 516
+L REM RGL+
Sbjct: 413 SKRVEDGTELFREMSHRGLV 432
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/512 (36%), Positives = 304/512 (59%), Gaps = 55/512 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD + +F +++ P P I EF K+L+++ KMK + ISL +++ GI+ ++ T NI
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 90 LINCYCHQAQITSAFSVLAKILK-----------------------------------KG 114
LINC+C ++QI+ A ++L K++K G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y+P+TITFTTLI GL L+ + A+ D +V +G N ++YG ++NGLCK G +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++ +VV+Y+T+IDSLCK DA NL++EM + P+V+T++SLI
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C + +A LL +M+ + INP+V T+N L+DAF KEGK+ EA + M+K+ + P++
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+SL++G+C+ +++AK++ M + PNV +YNT+ING CK K +DE + LF E
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + +V NTVT+ +LI G ++ NI+TYN+LLD LCK+
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + + ++ ++P + TYNI+++G+C+ G++++ ++ L KG V Y
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
MI+G C++GL +EA L KM ++G +PD+ T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 17/421 (4%)
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
H ++ A + ++K P+ F L+ + + + + + G N
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y LIN C+ Q +L LL K+ +P +V +++++ C ++DA L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
V M P +TF +LI+G + + EA+AL+D MV + P++ TY ++V+ CK G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
A N+L M ++ NVV Y++++D C + A + M +GV PNV +Y+++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN-IITYNSLLDALCKSHH 394
I+ LC + +A L ++M + I PN VTFN+LID K ++ L D + K
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK--- 358
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+ I PD+ TY+ L++G C RL A+ + + +++K V TY
Sbjct: 359 -------------RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ING CK DE + L +M G + + +T+ T+I F+ + A+ + ++M++ G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 515 L 515
+
Sbjct: 466 V 466
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 200/391 (51%), Gaps = 16/391 (4%)
Query: 27 IHN-VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIV 85
+HN + V++ +R+++ P ++ +G ++ L K A +L +++E I ++V
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
+ +I+ C A ++ ++ KG +PN IT+++LI LC + A + +
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ + + N +++ LI+ K G+ + +L ++ + + PD+ Y+++I+ C +
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+A +++ M++ P+VVT+N+LI GFC ++ E + L EM + + + TY L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ F + A V M+ GV PN++TY +L+DG C ++ KA + + + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P + +YN MI G+CK V++ +LF + K + P+ + +N++I G C+ +
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL------ 555
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
++A AL +K+R+ G PD T
Sbjct: 556 ---------KEEADALFRKMREDGPLPDSGT 577
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/528 (36%), Positives = 305/528 (57%), Gaps = 55/528 (10%)
Query: 40 LLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQ 99
+++ P P I EF K+L+++ KMK + ISL +++ GI+ ++ T NILINC+C ++Q
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 100 ITSAFSVLAKILK-----------------------------------KGYQPNTITFTT 124
I+ A ++L K++K GY+P+TITFTT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 125 LIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL 184
LI GL L+ + A+ D +V +G N ++YG ++NGLCK G + LL K+E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++ DVV++NTIIDSLCK V DA NL+ EM I P+VVT++SLI C G+ +A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
LL +M+ K INP++ T+N L+DAF KEGK EA + M+K+ + P++ TY SL++G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C+ ++KAK + M + P++ +YNT+I G CK K V++ LF EM + +V +T
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 365 VTFNSLIDGL-----CKS---------------NIITYNSLLDALCKSHHVDKAIALIKK 404
VT+ +LI GL C + +I+TY+ LLD LC + ++KA+ +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
++ I+ D+ Y +++G+C+ G++ + ++ L KG V TY MI+GLC + L
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
EA LL KM+++G +PD+ T+ T+IRA G+ + +L+REM +
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 184/343 (53%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D ++ N++ ++ F I+ SL K +H A++L ++E GI P++VT +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+C C + + A +L+ +++K PN +TF LI G+ A + HD ++ +
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ +Y +LING C + + Q+ + K PD+ YNT+I CK V D
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EM ++ VT+ +LI G G A + +MV+ + PD+ TY+IL+D
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C GK+++A V M K +K ++ YT++++G C +V+ + S+ +GV PN
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
V +YNTMI+GLC +++ EA L +M +P++ T+N+LI
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/541 (34%), Positives = 299/541 (55%), Gaps = 55/541 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+D + +F +++ P P I+F ++ +++ + K Y + +E GI D+ T+ I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTL------------------------ 125
+INCYC + ++ AFSVL + K GY+P+TITF+TL
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 126 -----------IKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
I GLCL G+V AL D +V GF ++++YG ++N LCK G + +L
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
L RK+E + +K VV Y+ +IDSLCKD DA +L++EM I VVT++SLI G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ + +L EM+ +NI PDV T++ L+D F KEGK+ EA + M+ +G+ P+
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+TY SL+DG+C + +++A + + M +G P++ +Y+ +IN CK K VD+ + LF E
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
+ K ++PNT+T+N+L+ G C+S +++TY LLD LC +
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++KA+ + +K++ + + YNI++ G+C ++ +A + L KG V TY +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
MI GLCK+G EA L KM+++GC PD T+ +IRA + +L+ EM G
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCG 590
Query: 515 L 515
Sbjct: 591 F 591
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/555 (25%), Positives = 244/555 (43%), Gaps = 106/555 (19%)
Query: 52 FGKILTSLVKMKHYS--TAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
F +IL + HYS T LS++ DI ++ A +
Sbjct: 15 FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDI--------------KVNDAIDLFES 60
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+++ P I F L + Q L F + G + + +IN C+ +
Sbjct: 61 MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKK 120
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
+ +L + +PD + ++T+++ C + V++A L MV M+ P +VT ++
Sbjct: 121 LLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST 180
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
LI G C+ G++ EA+ L+D MV PD TY +++ CK G A ++ M ++
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN 240
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
+K +VV Y+ ++D C + A + N M +G+ +V +Y+++I GLC D+
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 350 NLFAEMDCKNIVPNTVTF-----------------------------------NSLIDGL 374
+ EM +NI+P+ VTF NSLIDG
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 375 CKSN--------------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
CK N I+TY+ L+++ CK+ VD + L ++I +G+ P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
TYN L+ G C+ G+L A+E+ Q+++++G P +V TY I+++GLC G ++AL + K
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 475 ME-----------------------------------DNGCMPDAITFETIIRALFEKGE 499
M+ D G PD +T+ +I L +KG
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 500 NYKAEKLLREMMARG 514
+A+ L R+M G
Sbjct: 541 LSEADMLFRKMKEDG 555
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 205/396 (51%), Gaps = 17/396 (4%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
+ +F ++ + ++++ ++ SL K + A+SL +++E GI D+VT + LI
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C+ + +L +++ + P+ +TF+ LI G++ A + ++ ++ +G
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ I+Y +LI+G CK + Q+ + K +PD+V Y+ +I+S CK V D L+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
E+ + ++P+ +T+N+L+ GFC G+L A L EMV++ + P V TY IL+D C
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G++ +A + M K + + Y ++ G C S+V+ A + S+ +GV P+V +Y
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG-LCKSNIITYNSLLDALCK 391
N MI GLCK + EA LF +M P+ T+N LI L S +I+
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS---------- 578
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
++ LI++++ G D T +++D L +
Sbjct: 579 ------SVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 195/383 (50%), Gaps = 15/383 (3%)
Query: 134 QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYN 193
+V A+ + ++ I + L + + + Q L + +E ++ D+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 194 TIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK 253
+I+ C+ + AF++ + P +TF++L+ GFC+ G++ EA+AL+D MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
PD+ T + L++ C +G+V EA ++ M++ G +P+ VTY +++ C A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ M +R + +V Y+ +I+ LCK D+AL+LF EM+ K I
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI------------- 276
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
K++++TY+SL+ LC D +++++ + I PDV T++ L+D +EG+L A
Sbjct: 277 --KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+E+ +++T+G TY +I+G CKE EA + M GC PD +T+ +I +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 494 LFEKGENYKAEKLLREMMARGLL 516
+ +L RE+ ++GL+
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLI 417
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 175/346 (50%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+ DD +S+FN + ++ + ++ L + + ++ I PD+VT +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ + + ++ A + +++ +G P+TIT+ +LI G C + A Q D +V++
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + ++Y LIN CK + ++L R+I K + P+ + YNT++ C+ + A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EMV+ + PSVVT+ L+ G C G+L +A+ + ++M + + YNI++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C KV +A ++ + +GVKP+VVTY ++ G C +++A + M + G TP+
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+YN +I + ++ L EM ++ T +ID L
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 160/323 (49%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
DD + ++ + P ++ F ++ VK A L +++ GI PD +T N L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ +C + + A + ++ KG +P+ +T++ LI C +V ++ + ++G
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N I+Y TL+ G C+ G+ A+ +L +++ + V P VV Y ++D LC + + A
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALE 476
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
++ +M R+ + +N +I+G C ++ +A +L + K + PDV TYN+++ C
Sbjct: 477 IFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLC 536
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
K+G + EA + M + G P+ TY L+ + S + + ++ M G + +
Sbjct: 537 KKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSS 596
Query: 331 SYNTMINGLCKIKMVDEALNLFA 353
+ +I+ L ++ L++ +
Sbjct: 597 TIKMVIDMLSDRRLDKSFLDMLS 619
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 360 bits (924), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 314/545 (57%), Gaps = 58/545 (10%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I VDD V +F +++ P P I+EF K+L+++ KM + ISL Q++ GI+ D+ T
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120
Query: 87 LNILINCYCHQAQITSAFSVLAKILK---------------------------------- 112
+I INC+C ++Q++ A +VLAK++K
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 113 -KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
GY+P+T TFTTLI GL L+ + A+ D +V +G + ++YGT++NGLCK G
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+L LL K+E +K +VV++NTIIDSLCK V A +L++EM I P+VVT+NSLI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
C G+ +A LL M+ K INP+V T+N L+DAF KEGK+ EA + M+++ +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P+ +TY L++G+C+ + +++AK + M + PN+Q+YNT+ING CK K V++ + L
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 352 FAEMDCKNIVPNTVTFNSLIDGL-----CKS---------------NIITYNSLLDALCK 391
F EM + +V NTVT+ ++I G C S +I+TY+ LL LC
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+D A+ + K ++ ++ ++ YN +++G+C+ G++ A ++ L K P V T
Sbjct: 481 YGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK--PDVV-T 537
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
Y MI+GLC + L EA L KM+++G +P++ T+ T+IRA + + +L++EM
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 512 ARGLL 516
+ G +
Sbjct: 598 SSGFV 602
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 296/557 (53%), Gaps = 74/557 (13%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++DD + F+ ++R P ++ K++ V+M AISL ++E I +I + N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI C+C +++ + S K+ K G+QP+ +TF TL+ GLCL ++ AL ++V
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 149 GF--------------------------------------------------HLNQISYG 158
GF H++ ++YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
T++NG+CKMG T+++L LL K+E +KPDVV+Y+ IID LCKD +DA L+SEM+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
I P+V T+N +I GFC G+ +A LL +M+ + INPDV T+N L+ A KEGK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+ M+ + + P+ VTY S++ G+C + + AK++ + M +P+V ++NT+I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDV 441
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK--------------------SN 378
C+ K VDE + L E+ + +V NT T+N+LI G C+ +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
IT N LL C++ +++A+ L + I+ I D YNI++ G+C+ ++ A ++
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
L G V+TY +MI+G C + +A L KM+DNG PD T+ T+IR + G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 499 ENYKAEKLLREMMARGL 515
E K+ +L+ EM + G
Sbjct: 622 EIDKSIELISEMRSNGF 638
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 199/395 (50%), Gaps = 36/395 (9%)
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
A+ F D++V + +I +M + ++ L RK+E + + ++ +N +I
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA-------------- 243
C ++ + + + ++ + P VVTFN+L++G C+ ++ EA
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 244 -IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
+AL D+MV + P V T+N L++ C EG+V EA ++ M+ +G+ +VVTY ++++
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
G C + + A +L+ M + + P+V Y+ +I+ LCK +A LF+EM K I P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
N + TYN ++D C A L++ + ++ I PDV T+N L+
Sbjct: 330 N---------------VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALIS 374
Query: 423 GLCEEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
+EG+L A+++ ++L + +P TV TY MI G CK FD+A + M
Sbjct: 375 ASVKEGKLFEAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMAS---- 429
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
PD +TF TII + +LLRE+ RGL+
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 172/345 (49%), Gaps = 4/345 (1%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D +F+ +L P + + ++ +S A L + I PD++T N LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ + ++ A + ++L + P+T+T+ ++I G C + + A D + +
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 430
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+ +++ T+I+ C+ + +QLLR+I + + + YNT+I C+ + A +L
Sbjct: 431 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+ EM++ + P +T N L+YGFC +L+EA+ L + + I+ D YNI++ CK
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
KV EA ++ + GV+P+V TY ++ G+C S ++ A + + M G P+ +
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
YNT+I G K +D+++ L +EM + T + +C+
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 4/272 (1%)
Query: 38 NRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQ 97
+ +L P + + ++ K + A H + +PD+VT N +I+ YC
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA---KHMFDLMA-SPDVVTFNTIIDVYCRA 445
Query: 98 AQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISY 157
++ +L +I ++G NT T+ TLI G C + A +++ G + I+
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 158 GTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA 217
L+ G C+ + +L+L I+ + D V YN II +CK + V +A++L+ +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
+ P V T+N +I GFC + +A L +M PD TYN L+ K G++ +
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+ +++ M G + T + C VS+
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 72/175 (41%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N++ +F ++ P I +L + + A+ L ++ + I D V
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
NI+I+ C +++ A+ + + G +P+ T+ +I G C + A +
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
G + +Y TLI G K G+ S++L+ ++ D + +C+
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 296/557 (53%), Gaps = 74/557 (13%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++DD + F+ ++R P ++ K++ V+M AISL ++E I +I + N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI C+C +++ + S K+ K G+QP+ +TF TL+ GLCL ++ AL ++V
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 149 GF--------------------------------------------------HLNQISYG 158
GF H++ ++YG
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
T++NG+CKMG T+++L LL K+E +KPDVV+Y+ IID LCKD +DA L+SEM+
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
I P+V T+N +I GFC G+ +A LL +M+ + INPDV T+N L+ A KEGK+ EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+ M+ + + P+ VTY S++ G+C + + AK++ + M +P+V ++NT+I+
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDV 441
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK--------------------SN 378
C+ K VDE + L E+ + +V NT T+N+LI G C+ +
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
IT N LL C++ +++A+ L + I+ I D YNI++ G+C+ ++ A ++
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
L G V+TY +MI+G C + +A L KM+DNG PD T+ T+IR + G
Sbjct: 562 SLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG 621
Query: 499 ENYKAEKLLREMMARGL 515
E K+ +L+ EM + G
Sbjct: 622 EIDKSIELISEMRSNGF 638
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 202/405 (49%), Gaps = 23/405 (5%)
Query: 32 DVVSIFNRLLRMSPT---PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
D S N L +M T P ++ + I+ L K H+S A L ++ GI P++ T N
Sbjct: 276 DTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYN 335
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I+ +C + + A +L ++++ P+ +TF LI G++ A + D ++ +
Sbjct: 336 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++Y ++I G CK + + + + PDVV +NTIID C+ V +
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMF----DLMASPDVVTFNTIIDVYCRAKRVDEG 451
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L E+ ++ + T+N+LI+GFC V L A L EM++ + PD T NIL+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC+ K++EA + V+ + + V Y ++ G C S+V++A + S+P GV P+
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
VQ+YN MI+G C + +A LF +M P+ T+N+LI G K+
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAG---------- 621
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+DK+I LI ++R G D T ++ D L +GRL +
Sbjct: 622 -----EIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 200/399 (50%), Gaps = 36/399 (9%)
Query: 134 QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYN 193
+ A+ F D++V + +I +M + ++ L RK+E + + ++ +N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 194 TIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA---------- 243
+I C ++ + + + ++ + P VVTFN+L++G C+ ++ EA
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 244 -----IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+AL D+MV + P V T+N L++ C EG+V EA ++ M+ +G+ +VVTY
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
++++G C + + A +L+ M + + P+V Y+ +I+ LCK +A LF+EM K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
I PN + TYN ++D C A L++ + ++ I PDV T+N
Sbjct: 326 GIAPN---------------VFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFN 370
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
L+ +EG+L A+++ ++L + +P TV TY MI G CK FD+A + M
Sbjct: 371 ALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-TYNSMIYGFCKHNRFDDAKHMFDLMAS 429
Query: 478 NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
PD +TF TII + +LLRE+ RGL+
Sbjct: 430 ----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N++ +F ++ P I +L + + A+ L ++ + I D V
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
NI+I+ C +++ A+ + + G +P+ T+ +I G C + A +
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + +Y TLI G K G+ S++L+ ++ D + D L+T
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD------LIT 653
Query: 207 DA 208
D
Sbjct: 654 DG 655
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 331 bits (849), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 274/471 (58%), Gaps = 50/471 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGIT-------- 81
+DD + +F + + P P IIEF K+L+++ KM + IS ++E GI+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 82 ---------------------------PDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
PDIVTLN L+N +CH +I+ A +++ ++++ G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y+P+T+TFTTLI GL L+ + A+ D +V +G + ++YG ++NGLCK G T +L
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++ +VV+Y+T+IDSLCK DA NL++EM + P+V+T++SLI
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ +A LL +M+ + INP++ T++ L+DAF K+GK+ +A + M+K+ + PN+
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNI 358
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+SL++G+C++ + +AK +L M ++ PNV +YNT+ING CK K VD+ + LF E
Sbjct: 359 FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFRE 418
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M + +V NTVT+ +LI G ++ D A + K++ G+ P++
Sbjct: 419 MSQRGLVGNTVTYTTLIHG---------------FFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
TYNIL+DGLC+ G+L A V + L + TY IMI G+CK G +
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 207/381 (54%), Gaps = 20/381 (5%)
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
I + L++ + KM + + K+E + ++ YN +I+ C+ + ++ A L +
Sbjct: 79 IEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGK 138
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M+ + P +VT NSL+ GFC ++ +A+AL+D+MV PD T+ L+ K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
EA ++ M+++G +P++VTY ++++G C + + A +LN M + NV Y+T
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK------------------ 376
+I+ LCK + D+ALNLF EM+ K + PN +T++SLI LC
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 377 --SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
N++T+++L+DA K + KA L +++ + I P++ TY+ L++G C RL A+
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
++++ ++ K V TY +ING CK D+ + L +M G + + +T+ T+I
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 495 FEKGENYKAEKLLREMMARGL 515
F+ + A+ + ++M++ G+
Sbjct: 439 FQARDCDNAQMVFKQMVSVGV 459
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 209/421 (49%), Gaps = 21/421 (4%)
Query: 117 PNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQL 176
P+ I F+ L+ + + + F + + G N +Y LIN C+ + +L L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 177 LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCI 236
L K+ +PD+V N++++ C ++DA L +MV M P VTF +LI+G +
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
+ EA+AL+D MV + PD+ TY +V+ CK G A N+L M ++ NVV
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y++++D C + A + M +GV PNV +Y+++I+ LC +A L ++M
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 357 CKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVD 396
+ I PN VTF++LID K NI TY+SL++ C +
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+A +++ + + P+V TYN L++G C+ R+ E+ +++ +G TYT +I
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+G + D A + +M G P+ +T+ ++ L + G+ KA ++ E + R +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA-MVVFEYLQRSTM 494
Query: 517 E 517
E
Sbjct: 495 E 495
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 55/380 (14%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
Y ++ + D + DA L+ M R PS++ F+ L+ + + I+ ++M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 252 TKNINPDVYTYNILVDAFCK-----------------------------------EGKVK 276
I+ ++YTYNIL++ FC+ ++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+A ++ M++ G KP+ VT+T+L+ G L ++ ++A +++ M QRG P++ +Y ++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-------------------- 376
NGLCK D ALNL +M+ I N V ++++ID LCK
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
N+ITY+SL+ LC A L+ + ++ I P++ T++ L+D ++G+L A+++
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
++++ + + TY+ +ING C EA +L M C+P+ +T+ T+I +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 497 KGENYKAEKLLREMMARGLL 516
K +L REM RGL+
Sbjct: 406 AKRVDKGMELFREMSQRGLV 425
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 26/277 (9%)
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN- 318
Y Y ++ + ++ +A + VM + P+++ ++ L+ ++++NK +++
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSA---IAKMNKFDLVISF 100
Query: 319 --SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC- 375
M G++ N+ +YN +IN C+ + AL L +M P+ VT NSL++G C
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH 160
Query: 376 -------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
K + +T+ +L+ L + +A+ALI ++ +G QPD+ T
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
Y +++GLC+ G A ++ + V Y+ +I+ LCK D+AL L ++ME
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 477 DNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+ G P+ IT+ ++I L G A +LL +M+ R
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 328 bits (842), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 173/522 (33%), Positives = 296/522 (56%), Gaps = 51/522 (9%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGIT-------- 81
+DD + +F +++ P P I+EF K+L+++ KM + ISL Q++ GI+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 82 ---------------------------PDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
P IVTLN L+N +CH +I+ A +++ ++++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
YQP+T+TFTTL+ GL + + A+ + +V +G + ++YG +INGLCK G+ +L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL K+E ++ DVV+YNTIID LCK + DAF+L+++M I P V T+N LI
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK-QGVKPN 293
C G+ +A LL +M+ KNINPD+ +N L+DAF KEGK+ EA + M+K + P+
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
VV Y +L+ G+C V + + M QRG+ N +Y T+I+G + + D A +F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
+M + P+ +T+N L+DGLC + +V+ A+ + + ++ + ++ D
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNG---------------NVETALVVFEYMQKRDMKLD 460
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
+ TY +++ LC+ G++++ ++ L KG V TYT M++G C++GL +EA L
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+M+++G +P++ T+ T+IRA G+ + +L++EM + G
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 277/488 (56%), Gaps = 18/488 (3%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ + +F ++ P P II+F K+L + KMK + I+L L+ G++ D+ T N+L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+NC+C +Q A S L K++K G++P+ +TFT+LI G CL +++ A+ + +V G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ + Y T+I+ LCK G +L L ++E ++PDVVMY ++++ LC DA +
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
L M +I P V+TFN+LI F G+ +A L +EM+ +I P+++TY L++ FC
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
EG V EA + +M +G P+VV YTSL++G+C +V+ A I M Q+G+T N
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALC 390
+Y T+I G ++ + A +F+ M + + P NI TYN LL LC
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP---------------NIRTYNVLLHCLC 398
Query: 391 KSHHVDKAIALIKKIRDQ---GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ V KA+ + + ++ + G+ P++ TYN+L+ GLC G+L+ A V +D+ + +
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
+ TYTI+I G+CK G A+ L + G P+ +T+ T+I LF +G ++A L
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 508 REMMARGL 515
R+M G+
Sbjct: 519 RKMKEDGV 526
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 200/387 (51%), Gaps = 18/387 (4%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ +++ +S+ N+++ M P ++ + I+ SL K H + A+SL Q+E GI PD+V
Sbjct: 156 NRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMY 215
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
L+N C+ + A S+L + K+ +P+ ITF LI G+ A + ++ ++
Sbjct: 216 TSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR 275
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
N +Y +LING C G + Q+ +E K PDVV Y ++I+ CK V D
Sbjct: 276 MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDD 335
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A ++ EM + + +T+ +LI GF VG+ A + MV++ + P++ TYN+L+
Sbjct: 336 AMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Query: 268 AFCKEGKVKEATNVLAVMMKQ---GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
C GKVK+A + M K+ GV PN+ TY L+ G C ++ KA + M +R
Sbjct: 396 CLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
+ + +Y +I G+CK V A+NLF + K + PN VT+ ++I GL +
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR-------- 507
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQ 411
+ L HV L +K+++ G+
Sbjct: 508 --EGLKHEAHV-----LFRKMKEDGVS 527
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 265/454 (58%), Gaps = 18/454 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+++ + +F ++++ P P I++F K+L+ + K K+Y ISL H +E GI D+ + N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
I+INC C ++ A SV+ K++K GY+P+ +T ++LI G C +V A+ +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF + + Y T+I+G CK+G +++L ++E V+ D V YN+++ LC +DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L +MV I+P+V+TF ++I F G+ EA+ L +EM + ++PDV+TYN L++
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C G+V EA +L +M+ +G P+VVTY +L++G+C V++ + M QRG+ +
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGD 348
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+YNT+I G + D A +F+ MD + NI TY+ LL
Sbjct: 349 TITYNTIIQGYFQAGRPDAAQEIFSRMD------------------SRPNIRTYSILLYG 390
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
LC + V+KA+ L + ++ I+ D+ TYNI++ G+C+ G +++A ++ + L KG
Sbjct: 391 LCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 450
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
V +YT MI+G C++ +D++ L KM+++G +P
Sbjct: 451 VVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 180/327 (55%), Gaps = 20/327 (6%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+ +L+ +M+ R LPS+V F+ ++ I+L M I D+Y+YNI++
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ C+ + A +V+ MMK G +P+VVT +SL++G+C + V A +++ M + G
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
P+V YNT+I+G CKI +V++A+ LF M+ + + VT+NSL+ GLC S
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
N+IT+ +++D K +A+ L +++ + + PDV TYN L++GLC
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
GR+ A++++ ++TKG V TY +ING CK DE L +M G + D IT
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 487 FETIIRALFEKGENYKAEKLLREMMAR 513
+ TII+ F+ G A+++ M +R
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 172/335 (51%), Gaps = 3/335 (0%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ V D + + +++ M P ++ + I+ K+ + A+ L ++E G+ D VT
Sbjct: 153 NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N L+ C + + A ++ ++ + PN ITFT +I G+ A++ ++ +
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ + +Y +LINGLC G+ + Q+L + K PDVV YNT+I+ CK V +
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+ EM ++ +T+N++I G+ G+ A + M ++ P++ TY+IL+
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLY 389
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C +V++A + M K ++ ++ TY ++ G C + V A + S+ +G+ P
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
+V SY TMI+G C+ + D++ L+ +M ++P
Sbjct: 450 DVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 276/485 (56%), Gaps = 23/485 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D + +F+ +++ P P I++F ++L+++VK+K Y ISL ++E GI D+ T NI
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+INC+C Q++ A S+L K+LK GY+P+ +T +L+ G C +V A+ D +V G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ + ++Y +I+ LCK + + ++IE K ++P+VV Y +++ LC + +DA
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L S+M+ +I P+V+T+++L+ F G++ EA L +EMV +I+PD+ TY+ L++
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C ++ EA + +M+ +G +VV+Y +L++G+C V + M QRG+ N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+YNT+I G + VD+A F++MD I P +I TYN LL L
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP---------------DIWTYNILLGGL 410
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
C + ++KA+ + + ++ + + D+ TY ++ G+C+ G+++ A + L KG +
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
TYT M++GLC +GL E L +KM+ G M + T G+ + +L+++
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT--------LSDGDITLSAELIKK 522
Query: 510 MMARG 514
M++ G
Sbjct: 523 MLSCG 527
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 226/439 (51%), Gaps = 20/439 (4%)
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
++ A + + ++K P+ + F L+ + + + + G + ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
+IN C Q +L +L K+ +PD V ++++ C+ V+DA +L +MV +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
P +V +N++I C ++ +A E+ K I P+V TY LV+ C + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+L+ M+K+ + PNV+TY++L+D + +V +AK + M + + P++ +Y+++ING
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK--------------------SN 378
LC +DEA +F M K + + V++N+LI+G CK SN
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+TYN+L+ ++ VDKA ++ GI PD+ TYNIL+ GLC+ G L+ A + +
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
D+ + + + TYT +I G+CK G +EA +L + G PD +T+ T++ L KG
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 499 ENYKAEKLLREMMARGLLE 517
++ E L +M GL++
Sbjct: 485 LLHEVEALYTKMKQEGLMK 503
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 188/330 (56%), Gaps = 20/330 (6%)
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+D + DA +L+S+MV R PS+V FN L+ + + I+L +M I D+Y
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
T+NI+++ FC +V A ++L M+K G +P+ VT SL++G+C + V+ A +++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--- 377
+ G P++ +YN +I+ LCK K V++A + F E++ K I PN VT+ +L++GLC S
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 378 -----------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
N+ITY++LLDA K+ V +A L +++ I PD+ TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
++GLC R+ A ++ +++KG V +Y +ING CK ++ + L +M G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREM 510
+ + +T+ T+I+ F+ G+ KA++ +M
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 201 bits (511), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 188/341 (55%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ V D VS+ ++++ + P I+ + I+ SL K K + A ++E GI P++VT
Sbjct: 169 NRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
L+N C+ ++ + A +L+ ++KK PN IT++ L+ NG+V A + + +V
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ ++Y +LINGLC + + Q+ + K DVV YNT+I+ CK V D
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+ EM ++ + VT+N+LI GF G + +A +M I+PD++TYNIL+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C G++++A + M K+ + ++VTYT+++ G C +V +A + S+ +G+ P
Sbjct: 409 GLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP 468
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
++ +Y TM++GLC ++ E L+ +M + ++ N T +
Sbjct: 469 DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 257/454 (56%), Gaps = 15/454 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DD + +F +++ P P I +F ++L+++ KMK Y I L Q++ GI ++ T NI
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+NC+C +Q++ A S L K++K G++P+ +TF +L+ G C +V AL D +V G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ N + Y T+I+GLCK Q +L LL ++E + PDVV YN++I LC +DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ S M I P V TFN+LI G++ EA +EM+ ++++PD+ TY++L+
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C ++ EA + M+ +G P+VVTY+ L++GYC +V + M QRGV N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+Y +I G C+ ++ A +F M + PN +T+N L+ GLC +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG----------- 410
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
++KA+ ++ ++ G+ D+ TYNI++ G+C+ G + +A ++ L +G +
Sbjct: 411 ----KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
TYT M+ GL K+GL EA L KM+++G +P+
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 146/299 (48%), Gaps = 20/299 (6%)
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+L +++ L MV P + ++ L+ A K K + M G+ N+ T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
L++ +C S+++ A L M + G P++ ++ +++NG C+ V +AL +F +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 359 NIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKA 398
PN V +N++IDGLCKS +++TYNSL+ LC S A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
++ + + I PDV T+N L+D +EGR+ A+E ++++ + + TY+++I G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
LC DEA + M GC PD +T+ +I + + KL EM RG++
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 259/464 (55%), Gaps = 17/464 (3%)
Query: 27 IHNV--DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDI 84
+HN+ +D + +F R++ P P II+F ++L+ + KM Y ISL Q++ GI P +
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 118
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
T NI+++C C +Q A L K++K G++P+ +TFT+L+ G C +++ A+ D
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
++ GF N ++Y TLI LCK +++L ++ +P+VV YN ++ LC+
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
DA L +M+ RI P+V+TF +LI F VG+L EA L + M+ ++ PDV+TY
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
L++ C G + EA + +M + G PN V YT+L+ G+C V I M Q+G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
V N +Y +I G C + D A +F +M + P+ I TYN
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD---------------IRTYNV 403
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
LLD LC + V+KA+ + + +R + + ++ TY I++ G+C+ G++++A ++ L +KG
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG 463
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
V TYT MI+G C+ GL EA +L KM+++G +P+ ++
Sbjct: 464 MKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 330 QSYNTMI-NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN---------- 378
SY ++ NGL ++ ++AL+LF M +P+ + F L+ + K N
Sbjct: 49 SSYRKILRNGLHNLQF-NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFE 107
Query: 379 ----------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+ T N ++ +C S +A + K+ G +PD+ T+ L++G C
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
R+++A + +L G+ V TYT +I LCK + A+ L ++M NG P+ +T+
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 489 TIIRALFEKGENYKAEKLLREMMAR 513
++ L E G A LLR+MM R
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKR 252
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 295 bits (754), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 274/505 (54%), Gaps = 25/505 (4%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
++F +L P + FG ++ + + +A+SL + G P+ V LI+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
++ A +L ++ G P+ TF +I GLC ++ A + + ++ +GF
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ I+YG L+NGLCK+G+ A+ L +I KP++V++NT+I + DA +
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 213 SEMV-AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
S+MV + I+P V T+NSLIYG+ G + A+ +L +M K P+VY+Y ILVD FCK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
GK+ EA NVL M G+KPN V + L+ +C + +A I MP++G P+V +
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-------------- 377
+N++I+GLC++ + AL L +M + +V NTVT+N+LI+ +
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 378 ------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ ITYNSL+ LC++ VDKA +L +K+ G P + NIL++GLC G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A E ++++ +G + T+ +INGLC+ G ++ LT+ K++ G PD +TF T++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 492 RALFEKGENYKAEKLLREMMARGLL 516
L + G Y A LL E + G +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 218/431 (50%), Gaps = 24/431 (5%)
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
V L IL++ CH+ A +V +L + P TF ++K C ++ +AL
Sbjct: 187 VVLEILVSGNCHKV----AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRD 242
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+ G N + Y TLI+ L K + +LQLL ++ PD +N +I LCK
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ +A + + M+ P +T+ L+ G C +G++ A ++ + P++ +N
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNT 358
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+ F G++ +A VL+ M+ G+ P+V TY SL+ GY V A +L+ M +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
G PNV SY +++G CK+ +DEA N+ EM + PNTV FN LI
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS----------- 467
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
A CK H + +A+ + +++ +G +PDV T+N L+ GLCE +K+A +++D++++
Sbjct: 468 ----AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
G TY +IN + G EA L+++M G D IT+ ++I+ L GE KA
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 504 EKLLREMMARG 514
L +M+ G
Sbjct: 584 RSLFEKMLRDG 594
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 206/399 (51%), Gaps = 20/399 (5%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAIS-LSHQLEFTGITPDIV 85
I VD +F R+ P P I+ F ++ V A + LS + GI PD+
Sbjct: 335 IGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
T N LI Y + + A VL + KG +PN ++T L+ G C G++ A + +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
A G N + + LI+ CK + ++++ R++ K KPDV +N++I LC+ +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A L +M++ ++ + VT+N+LI F G++KEA L++EMV + D TYN L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ C+ G+V +A ++ M++ G P+ ++ L++G C V +A M RG
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
TP++ ++N++INGLC+ +++ L +F ++ + I P+TVTFN+L+ LCK +
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV----- 685
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
D + L + I D G P+ RT++IL+ +
Sbjct: 686 ---------YDACLLLDEGIED-GFVPNHRTWSILLQSI 714
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 205/427 (48%), Gaps = 26/427 (6%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ GY+ + + LI L NG+ +T + + +G + + +++ K G
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 172 ASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ +L+ ++ +P YN +++ L A N++ +M++ +I P++ TF +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
+ FC V ++ A++LL +M P+ Y L+ + K +V EA +L M G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
P+ T+ ++ G C +N+A ++N M RG P+ +Y ++NGLCKI VD A +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCK---------------------SNIITYNSLLDAL 389
LF + P V FN+LI G ++ TYNSL+
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
K V A+ ++ +R++G +P+V +Y IL+DG C+ G++ A V+ ++ G
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
+ +I+ CKE EA+ + +M GC PD TF ++I L E E A LLR+
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 510 MMARGLL 516
M++ G++
Sbjct: 520 MISEGVV 526
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 160/301 (53%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++ K+ A ++ +++ G+ P+ V N LI+ +C + +I A +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ +KG +P+ TF +LI GLC +++ AL ++++G N ++Y TLIN +
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G+ + + +L+ ++ + D + YN++I LC+ V A +L+ +M+ PS ++
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
N LI G C G ++EA+ EMV + PD+ T+N L++ C+ G++++ + +
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+G+ P+ VT+ +LM C V A +L+ + G PN ++++ ++ + + +D
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Query: 347 E 347
Sbjct: 722 R 722
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 264/486 (54%), Gaps = 50/486 (10%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
DD S+F +L+ P P I++F ++LT + KM + I L H++E GI+ D+ + IL
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+C+C ++++ A ++L K++K G++P+ +T
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTL---------------------------- 152
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
G+L+NG C+ + + ++ L+ ++G P+VV+YNT+I+ LCK+ + +A
Sbjct: 153 -------GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
++ M I VT+N+LI G G+ +A LL +MV + I+P+V + L+D F
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
KEG + EA N+ M+++ V PNV TY SL++G+C+ + AKY+ + M +G P+V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALC 390
+YNT+I G CK K V++ + LF EM + +V + T+N+LI G C++
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG------------ 373
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
++ A + ++ D G+ PD+ TYNIL+D LC G+++ A +++DL V +
Sbjct: 374 ---KLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
TY I+I GLC+ EA L + G PDAI + T+I L KG +A+KL R M
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 511 MARGLL 516
G +
Sbjct: 491 KEDGFM 496
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 158/305 (51%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++++ + +F + + + + +++ L ++ A L + I P+++
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ + + + A ++ +++++ PN T+ +LI G C++G + A D +V++
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + ++Y TLI G CK + ++L ++ + + D YNT+I C+ + A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+++ MV + P +VT+N L+ C G++++A+ +++++ ++ D+ TYNI++
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C+ K+KEA + + ++GVKP+ + Y +++ G C +A + M + G P+
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 329 VQSYN 333
+ Y+
Sbjct: 499 ERIYD 503
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 249/440 (56%), Gaps = 22/440 (5%)
Query: 27 IHNV--DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDI 84
+H++ +D ++F ++ P P I++F ++LT+ ++ Y T I S ++E GI+ D+
Sbjct: 47 LHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL 106
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
+ ILI+C+C ++++ A SVL K++K GY+P+ +TF +L+ G CL ++ A
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+V G+ N + Y TLI+GLCK G+ +L+LL ++E K + DVV YNT++ LC
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+DA + +M+ I P VVTF +LI F G L EA L EM+ +++P+ TYN
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
+++ C G++ +A +M +G PNVVTY +L+ G+C V++ + M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------- 377
++ +YNT+I+G C++ + AL++F M + + P+ +T L+ GLC +
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 378 -------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
I+ YN ++ LCK+ V+KA L ++ +G++PD RTY I++ GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 425 CEEGRLKNAQEVIQDLLTKG 444
C+ G + A E+I+ + +G
Sbjct: 467 CKNGPRREADELIRRMKEEG 486
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 178/327 (54%), Gaps = 20/327 (6%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
DAF L+ EMV + LPS+V F L+ + + + I +M I+ D+Y++ IL+
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
FC+ ++ A +VL MMK G +P++VT+ SL+ G+CLV+ + A ++ M + G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
PNV YNT+I+GLCK ++ AL L EM+ K + + VT+N+L+ GLC S
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
+++T+ +L+D K ++D+A L K++ + P+ TYN +++GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
GRL +A++ + +KG V TY +I+G CK + DE + L +M G D T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 487 FETIIRALFEKGENYKAEKLLREMMAR 513
+ T+I + G+ A + M++R
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 168/335 (50%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++ + D S+ +++ P ++ + ++ L K + A+ L +++E G+ D+VT
Sbjct: 154 VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVT 213
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N L+ C+ + + A +L ++K+ P+ +TFT LI G + A + + ++
Sbjct: 214 YNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
N ++Y ++INGLC G+ + + + K P+VV YNT+I CK +V
Sbjct: 274 QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVD 333
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+ L+ M + T+N+LI+G+C VG+L+ A+ + MV++ + PD+ T+ IL+
Sbjct: 334 EGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILL 393
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
C G+++ A M + +V Y ++ G C +V KA + +P GV
Sbjct: 394 HGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVK 453
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
P+ ++Y MI GLCK EA L M + I+
Sbjct: 454 PDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
GF + ++A AL EMV P + + L+ A + + M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
++ ++T L+ +C S ++ A +L M + G P++ ++ ++++G C + + +A +L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
M PN ++ YN+L+D LCK+ ++ A+ L+ ++ +G+
Sbjct: 165 ILMVKSGYEPN---------------VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
DV TYN L+ GLC GR +A +++D++ + V T+T +I+ K+G DEA L
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+M + P+ +T+ +II L G Y A+K M ++G
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLC--------------------KSNIITYNSL 385
++A LF EM +P+ V F L+ ++ ++ L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ C+ + A++++ K+ G +P + T+ L+ G C R+ +A ++ ++ GY
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
V Y +I+GLCK G + AL LL++ME G D +T+ T++ L G A +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 506 LLREMMARGL 515
+LR+MM R +
Sbjct: 233 MLRDMMKRSI 242
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 267/468 (57%), Gaps = 18/468 (3%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F ++ ++ A+ + Q+ G + V++N++++ +C + ++ A + + ++
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 112 KK-GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
+ G+ P+ TF TL+ GLC G V+ A++ D ++ +G+ + +Y ++I+GLCK+G+
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ ++++L ++ + P+ V YNT+I +LCK+ V +A L + + ILP V TFNSL
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I G C+ + A+ L +EM +K PD +TYN+L+D+ C +GK+ EA N+L M G
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
+V+TY +L+DG+C ++ +A+ I + M GV+ N +YNT+I+GLCK + V++A
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
L +M +++G K + TYNSLL C+ + KA +++ + G
Sbjct: 527 LMDQM--------------IMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
+PD+ TY L+ GLC+ GR++ A ++++ + KG +T Y +I GL ++ EA+
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 471 LLSKM-EDNGCMPDAITFETIIRALFEKGENYK-AEKLLREMMARGLL 516
L +M E N PDA+++ + R L G + A L E++ +G +
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFV 679
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 259/487 (53%), Gaps = 17/487 (3%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSH-QLEFTGITPDIVTLNI 89
D+++S+ + ++ P F + +L+ + + +SH ++ GI PD+ T N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI C Q+ A +L + G P+ TFTT+++G G + AL+ + +V G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK-LVKPDVVMYNTIIDSLCKDTLVTDA 208
+ +S +++G CK G+ +L ++++ + PD +NT+++ LCK V A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ M+ P V T+NS+I G C +G++KEA+ +LD+M+T++ +P+ TYN L+
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CKE +V+EAT + V+ +G+ P+V T+ SL+ G CL A + M +G P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+YN +I+ LC +DEALN+ +M+ C ++ITYN+L+D
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSG---------------CARSVITYNTLIDG 479
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
CK++ +A + ++ G+ + TYN L+DGLC+ R+++A +++ ++ +G
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
TY ++ C+ G +A ++ M NGC PD +T+ T+I L + G A KLLR
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 509 EMMARGL 515
+ +G+
Sbjct: 600 SIQMKGI 606
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 210/417 (50%), Gaps = 21/417 (5%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P F ++ L K H AI + + G PD+ T N +I+ C ++ A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L +++ + PNT+T+ TLI LC QV+ A + + ++G + ++ +LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
R +++L ++ K +PD YN +IDSLC + +A N+ +M SV+T
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N+LI GFC + +EA + DEM ++ + TYN L+D CK +V++A ++ M+
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+G KP+ TY SL+ +C ++ KA I+ +M G P++ +Y T+I+GLCK V+
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 347 EALNLFAEMDCK--NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
A L + K N+ P+ YN ++ L + +AI L ++
Sbjct: 593 VASKLLRSIQMKGINLTPH-----------------AYNPVIQGLFRKRKTTEAINLFRE 635
Query: 405 IRDQG-IQPDVRTYNILMDGLCE-EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+ +Q PD +Y I+ GLC G ++ A + + +LL KG+ + ++ GL
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGL 692
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 229/455 (50%), Gaps = 25/455 (5%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V + I + +L+ P + + +++ L K+ A+ + Q+ +P+ VT N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ C + Q+ A + + KG P+ TF +LI+GLCL + A++ + + ++
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G ++ +Y LI+ LC G+ +L +L+++E V+ YNT+ID CK +A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ EM + + VT+N+LI G C ++++A L+D+M+ + PD YTYN L+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC+ G +K+A +++ M G +P++VTY +L+ G C V A +L S+ +G+
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV-PNTVTFNSLIDGLCKSNIITYNSLLD 387
+YN +I GL + + EA+NLF EM +N P+ V++ + GLC
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG--------- 660
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC----EEGRLKNAQEVIQDLLTK 443
+ +A+ + ++ ++G P+ + +L +GL EE +K V+Q
Sbjct: 661 -----GPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFS 715
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
V+ M+ GL K F +AL L + D+
Sbjct: 716 EEEVS------MVKGLLKIRKFQDALATLGGVLDS 744
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 177/360 (49%), Gaps = 18/360 (5%)
Query: 160 LINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
L++ L A+L+L K P+ +Y I+ L + D + +M +
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKE 277
R TF LI + E ++++D M+ + + PD + YN +++ +K
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
A M G+KP+V T+ L+ C ++ A +L MP G+ P+ +++ T++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
G + +D AL + +M V F C + ++ N ++ CK V+
Sbjct: 233 GYIEEGDLDGALRIREQM---------VEFG------CSWSNVSVNVIVHGFCKEGRVED 277
Query: 398 AIALIKKIRDQ-GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
A+ I+++ +Q G PD T+N L++GLC+ G +K+A E++ +L +GY V TY +I
Sbjct: 278 ALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVI 337
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+GLCK G EA+ +L +M C P+ +T+ T+I L ++ + +A +L R + ++G+L
Sbjct: 338 SGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 397
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 264/505 (52%), Gaps = 21/505 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD++ ++ +L P I + K++ K+ + A ++ G+ PD T
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI YC + + SAF V ++ KG + N + +T LI GLC+ ++ A+ +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+Y LI LC + +L L++++E +KP++ Y +IDSLC A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L +M+ ++P+V+T+N+LI G+C G +++A+ +++ M ++ ++P+ TYN L+ +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK V +A VL M+++ V P+VVTY SL+DG C + A +L+ M RG+ P+
Sbjct: 439 CK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------ 377
+Y +MI+ LCK K V+EA +LF ++ K + PN V + +LIDG CK+
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEK 557
Query: 378 --------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
N +T+N+L+ LC + +A L +K+ G+QP V T IL+ L ++G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+A Q +L+ G TYT I C+EG +A +++KM +NG PD T+ +
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 490 IIRALFEKGENYKAEKLLREMMARG 514
+I+ + G+ A +L+ M G
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 149/456 (32%), Positives = 250/456 (54%), Gaps = 21/456 (4%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
+ P+I T N ++N YC + A ++KI++ G P+ T+T+LI G C + +A
Sbjct: 214 VCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAF 273
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ + + +G N+++Y LI+GLC + ++ L K++ P V Y +I SL
Sbjct: 274 KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSL 333
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
C ++A NL EM I P++ T+ LI C + ++A LL +M+ K + P+V
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
TYN L++ +CK G +++A +V+ +M + + PN TY L+ GYC S V+KA +LN
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNK 452
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-- 377
M +R V P+V +YN++I+G C+ D A L + M+ + +VP+ T+ S+ID LCKS
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 378 ------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
N++ Y +L+D CK+ VD+A +++K+ + P+ T+N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L+ GLC +G+LK A + + ++ G TV T TI+I+ L K+G FD A + +M +G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
PDA T+ T I+ +G AE ++ +M G+
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 218/413 (52%), Gaps = 19/413 (4%)
Query: 122 FTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE 181
+ TL+ L G V Q + ++ N +Y ++NG CK+G + Q + KI
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 182 GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLK 241
+ PD Y ++I C+ + AF +++EM + V + LI+G C+ ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
EA+ L +M P V TY +L+ + C + EA N++ M + G+KPN+ TYT L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
D C + KA+ +L M ++G+ PNV +YN +ING CK M+++A+++ M+ + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 362 PNTVTFNSLIDGLCKSN-------------------IITYNSLLDALCKSHHVDKAIALI 402
PNT T+N LI G CKSN ++TYNSL+D C+S + D A L+
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
+ D+G+ PD TY ++D LC+ R++ A ++ L KG V YT +I+G CK
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G DEA +L KM C+P+++TF +I L G+ +A L +M+ GL
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 243/486 (50%), Gaps = 5/486 (1%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ ++L P +I + ++ K A+ + +E ++P+ T N LI YC
Sbjct: 380 LLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC 439
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
++ + A VL K+L++ P+ +T+ +LI G C +G +A + + +G +Q
Sbjct: 440 -KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y ++I+ LCK + + L +E K V P+VVMY +ID CK V +A + +M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
++ LP+ +TFN+LI+G C G+LKEA L ++MV + P V T IL+ K+G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
A + M+ G KP+ TYT+ + YC + A+ ++ M + GV+P++ +Y+++
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHV 395
I G + + A ++ M P+ TF SLI L + LC ++
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 396 ---DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL-LTKGYPVTVRT 451
D + L++K+ + + P+ ++Y L+ G+CE G L+ A++V + +G +
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+ +++ CK +EA ++ M G +P + + +I L++KGE + + + ++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 512 ARGLLE 517
G E
Sbjct: 859 QCGYYE 864
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 227/483 (46%), Gaps = 32/483 (6%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NV + + N++L P ++ + ++ + ++ +A L + G+ PD T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I+ C ++ A + + +KG PN + +T LI G C G+V A + ++++
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N +++ LI+GLC G+ + + L K+ ++P V +I L KD A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ + +M++ P T+ + I +C G+L +A ++ +M ++PD++TY+ L+
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG---------------YCLVS---EV 310
+ G+ A +VL M G +P+ T+ SL+ C +S E
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
+ +L M + VTPN +SY +I G+C++ + A +F M +N
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ-RN----------- 789
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+G+ S ++ +N+LL CK ++A ++ + G P + + +L+ GL ++G
Sbjct: 790 -EGISPSELV-FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
+ V Q+LL GY + I+I+G+ K+GL + L + ME NGC + T+ +
Sbjct: 848 ERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL 907
Query: 491 IRA 493
I
Sbjct: 908 IEG 910
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK--------------- 376
YNT++N L + +VDE ++ EM + PN T+N +++G CK
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 377 -----SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ TY SL+ C+ +D A + ++ +G + + Y L+ GLC R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A ++ + TVRTYT++I LC EAL L+ +ME+ G P+ T+ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 492 RALFEKGENYKAEKLLREMMARGLL 516
+L + + KA +LL +M+ +GL+
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLM 390
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 256/478 (53%), Gaps = 21/478 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V + + +++++ P + + + L + A+ + L G PD++T N
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI C ++ A L K++ +G +P++ T+ TLI G C G VQ A + V
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF +Q +Y +LI+GLC G+T +L L + GK +KP+V++YNT+I L ++ +A
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L +EM ++P V TFN L+ G C +G + +A L+ M++K PD++T+NIL+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ + K++ A +L VM+ GV P+V TY SL++G C S+ +M ++G PN
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK------------ 376
+ ++N ++ LC+ + +DEAL L EM K++ P+ VTF +LIDG CK
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 377 ---------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
S+ TYN ++ A + +V A L +++ D+ + PD TY +++DG C+
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
G + + + +++ G+ ++ T +IN LC E EA ++ +M G +P+A+
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/501 (29%), Positives = 252/501 (50%), Gaps = 20/501 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + V++F R+ P + + I++ LV ++ A + ++ GITPD+ + I
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+ +C ++ +A +L + +G + N + + T++ G + ++A G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
L ++ L+ LCK G + +LL K+ + V P++ YN I LC+ + A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ ++ P V+T+N+LIYG C + +EA L +MV + + PD YTYN L+ +
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK G V+ A ++ + G P+ TY SL+DG C E N+A + N +G+ PNV
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK------------- 376
YNT+I GL M+ EA L EM K ++P TFN L++GLCK
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 377 -------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
+I T+N L+ ++ A+ ++ + D G+ PDV TYN L++GLC+ +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
++ E + ++ KG + T+ I++ LC+ DEAL LL +M++ PDA+TF T
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 490 IIRALFEKGENYKAEKLLREM 510
+I + G+ A L R+M
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 250/488 (51%), Gaps = 26/488 (5%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
+F ++L + + F K+L L K L ++ G+ P++ T N+ I
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
C + ++ A ++ ++++G +P+ IT+ LI GLC N + Q A + +V +G +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLV----KPDVVMYNTIIDSLCKDTLVTDAFN 210
+Y TLI G CK G +QL +I G V PD Y ++ID LC + A
Sbjct: 322 YTYNTLIAGYCKGGM----VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
L++E + I P+V+ +N+LI G G + EA L +EM K + P+V T+NILV+ C
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
K G V +A ++ VM+ +G P++ T+ L+ GY ++ A IL+ M GV P+V
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALC 390
+YN+++NGLCK ++ + T+ ++++ C N+ T+N LL++LC
Sbjct: 498 TYNSLLNGLCKTSKFEDVME---------------TYKTMVEKGCAPNLFTFNILLESLC 542
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT-- 448
+ +D+A+ L+++++++ + PD T+ L+DG C+ G L A + + + + Y V+
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSS 601
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
TY I+I+ ++ A L +M D PD T+ ++ + G K L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 509 EMMARGLL 516
EMM G +
Sbjct: 662 EMMENGFI 669
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 222/421 (52%), Gaps = 20/421 (4%)
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
Y + ++ A +V ++ +P ++ ++ L +G A + + + +G +
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
S+ + CK + A+L+LL + + + +VV Y T++ ++ + + L+
Sbjct: 146 VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFG 205
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
+M+A + + TFN L+ C G +KE LLD+++ + + P+++TYN+ + C+ G
Sbjct: 206 KMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRG 265
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
++ A ++ +++QG KP+V+TY +L+ G C S+ +A+ L M G+ P+ +YN
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------------------ 375
T+I G CK MV A + + VP+ T+ SLIDGLC
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 376 --KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
K N+I YN+L+ L + +A L ++ ++G+ P+V+T+NIL++GLC+ G + +A
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+++ +++KGY + T+ I+I+G + + AL +L M DNG PD T+ +++
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 494 L 494
L
Sbjct: 506 L 506
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 194/404 (48%), Gaps = 16/404 (3%)
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
G++ T+ ++I+ L G+ + + D G H+ + Y + + G+ +
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
++ + +++ +P V YN I+ L A +Y M I P V +F +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
FC + A+ LL+ M ++ +V Y +V F +E E + M+ GV
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+ T+ L+ C +V + + +L+ + +RGV PN+ +YN I GLC+ +D A+ +
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
LI+ K ++ITYN+L+ LCK+ +A + K+ ++G++P
Sbjct: 275 G---------------CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEP 319
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
D TYN L+ G C+ G ++ A+ ++ D + G+ TY +I+GLC EG + AL L
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
++ G P+ I + T+I+ L +G +A +L EM +GL+
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 272/523 (52%), Gaps = 36/523 (6%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMK-HYSTAISLSHQLEFTGITPDIVTLN 88
+D +SI + P ++ + +L + ++ K + S A ++ ++ + ++P++ T N
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI +C I A ++ K+ KG PN +T+ TLI G C ++ + + +
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N ISY +INGLC+ G+ + +L ++ + D V YNT+I CK+ A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+++EM+ + PSV+T+ SLI+ C G + A+ LD+M + + P+ TY LVD
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
F ++G + EA VL M G P+VVTY +L++G+C+ ++ A +L M ++G++P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------- 377
V SY+T+++G C+ VDEAL + EM K I P+T+T++SLI G C+
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 378 ---------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+ TY +L++A C ++KA+ L ++ ++G+ PDV TY++L++GL ++
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 429 RLKNAQEVIQDLL-TKGYPVTVRTYTI--------------MINGLCKEGLFDEALTLLS 473
R + A+ ++ L + P V +T+ +I G C +G+ EA +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
M PD + +I G+ KA L +EM+ G L
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 257/486 (52%), Gaps = 30/486 (6%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+D +++F+++ P ++ + ++ K++ L + G+ P++++ N
Sbjct: 220 NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYN 279
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
++IN C + ++ VL ++ ++GY + +T+ TLIKG C G AL H ++
Sbjct: 280 VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH 339
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + I+Y +LI+ +CK G +++ L ++ + + P+ Y T++D + + +A
Sbjct: 340 GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA 399
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ + EM PSVVT+N+LI G C+ G++++AIA+L++M K ++PDV +Y+ ++
Sbjct: 400 YRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG 459
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC+ V EA V M+++G+KP+ +TY+SL+ G+C +A + M + G+ P+
Sbjct: 460 FCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+Y +IN C +++AL L EM K ++P+ VT++ LI+GL K
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK------------ 567
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD---------------GLCEEGRLKNA 433
+S + L+K ++ + DV TY+ L++ G C +G + A
Sbjct: 568 --QSRTREAKRLLLKLFYEESVPSDV-TYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+V + +L K + Y IMI+G C+ G +A TL +M +G + +T +++A
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 494 LFEKGE 499
L ++G+
Sbjct: 685 LHKEGK 690
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 158/310 (50%), Gaps = 21/310 (6%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK-VKEATNVLAVM 285
F+ ++ + + + +A++++ P V +YN ++DA + + + A NV M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
++ V PNV TY L+ G+C ++ A + + M +G PNV +YNT+I+G CK++ +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSL 385
D+ L M K + PN +++N +I+GLC+ + +TYN+L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ CK + +A+ + ++ G+ P V TY L+ +C+ G + A E + + +G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
RTYT +++G ++G +EA +L +M DNG P +T+ +I G+ A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 506 LLREMMARGL 515
+L +M +GL
Sbjct: 437 VLEDMKEKGL 446
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 136/317 (42%), Gaps = 50/317 (15%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D +++ + +P ++ + +L+ + A+ + ++ GI PD +T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI +C Q + A + ++L+ G P+ T+T LI C+ G ++ ALQ H+ +V +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRK----------------------IE------ 181
+ ++Y LINGL K +TR + +LL K IE
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 182 ----------------------GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
GK KPD YN +I C+ + A+ LY EMV
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
L VT +L+ G++ E +++ ++ + +LV+ +EG +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 280 NVLAVMMKQGVKPNVVT 296
+VLA M K G PN ++
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 3/155 (1%)
Query: 364 TVTFNSLID--GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
++ F SL + LC S ++ ++ + + +DKA++++ + G P V +YN ++
Sbjct: 117 SLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVL 176
Query: 422 DGLCEEGR-LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
D R + A+ V +++L V TY I+I G C G D ALTL KME GC
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+P+ +T+ T+I + + KLLR M +GL
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 271
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 236/436 (54%), Gaps = 22/436 (5%)
Query: 27 IHNV--DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDI 84
+H++ +D +++F + P P I++F ++L ++ K+ Y ISL LE GI+ D+
Sbjct: 55 LHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDL 114
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
+ LI+C+C A+++ A S L K++K G++P+ +TF +L+ G C + A+ D
Sbjct: 115 YSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+V G+ N + Y T+I+ LC+ GQ +L +L+ ++ ++PDVV YN++I L
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGT 234
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ + S+M+ M I P V+TF++LI + GQL EA +EM+ +++NP++ TYN
Sbjct: 235 WGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNS 294
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
L++ C G + EA VL V++ +G PN VTY +L++GYC V+ IL M + G
Sbjct: 295 LINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG 354
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------- 377
V + +YNT+ G C+ A + M + P+ TFN L+DGLC
Sbjct: 355 VDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL 414
Query: 378 -------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
IITYN ++ LCK+ V+ A L + +G+ PDV TY +M GL
Sbjct: 415 VRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Query: 425 CEEGRLKNAQEVIQDL 440
+ + A E+ + +
Sbjct: 475 RRKRLWREAHELYRKM 490
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 207/411 (50%), Gaps = 55/411 (13%)
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+ + L+ + K+ + A + L R +E + D+ + T+ID C+ ++ A + +
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGK 139
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M+ + PS+VTF SL+ GFC V + EA++L+D++V P+V YN ++D+ C++G+
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
V A +VL M K G++P+VVTY SL+ + IL+ M + G++P+V +++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------- 377
+I+ K + EA + EM +++ PN VT+NSLI+GLC
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 378 ---NIITYNSLLDALCKSHHVDKAIAL--------------------------------- 401
N +TYN+L++ CK+ VD + +
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 402 --IKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+ ++ G+ PD+ T+NIL+DGLC+ G++ A ++DL V + TY I+I GL
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 460 CKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
CK ++A L + G PD IT+ T++ L K +A +L R+M
Sbjct: 440 CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 176/329 (53%), Gaps = 20/329 (6%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
DA L+ +M LPS+V F+ L+ + + + I+L + I+ D+Y++ L+
Sbjct: 62 DALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
D FC+ ++ A + L MMK G +P++VT+ SL++G+C V+ +A +++ + G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
PNV YNT+I+ LC+ V+ AL++ M I P+ VT+NSLI L S
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
++IT+++L+D K + +A ++ + + P++ TYN L++GLC
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCI 301
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G L A++V+ L++KG+ TY +ING CK D+ + +L M +G D T
Sbjct: 302 HGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGL 515
+ T+ + + G+ AEK+L M++ G+
Sbjct: 362 YNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 126/258 (48%), Gaps = 1/258 (0%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
I + ++RM +P +I F ++ K A +++ + P+IVT N LIN C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A VL ++ KG+ PN +T+ TLI G C +V ++ + G +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y TL G C+ G+ A+ ++L ++ V PD+ +N ++D LC + A ++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ + ++T+N +I G C ++++A L + K ++PDV TY ++ ++
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 276 KEATNVLAVMMKQ-GVKP 292
+EA + M K+ G+ P
Sbjct: 481 REAHELYRKMQKEDGLMP 498
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K +A + M + P++V ++ L+ +++ + + G++ ++ S+
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
T+I+ C+ + AL+ +M P+ VTF SL++G C N
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVN--------------- 163
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+A++L+ +I G +P+V YN ++D LCE+G++ A +V++ + G V TY
Sbjct: 164 RFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYN 223
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+I L G + + +LS M G PD ITF +I ++G+ +A+K EM+ R
Sbjct: 224 SLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQR 283
Query: 514 GL 515
+
Sbjct: 284 SV 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 21/199 (10%)
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN------------------ 378
+GL IK ++AL LF +M + +P+ V F+ L+ + K N
Sbjct: 53 SGLHSIKF-NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGIS 111
Query: 379 --IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
+ ++ +L+D C+ + A++ + K+ G +P + T+ L++G C R A +
Sbjct: 112 HDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSL 171
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
+ ++ GY V Y +I+ LC++G + AL +L M+ G PD +T+ ++I LF
Sbjct: 172 VDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFH 231
Query: 497 KGENYKAEKLLREMMARGL 515
G + ++L +MM G+
Sbjct: 232 SGTWGVSARILSDMMRMGI 250
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VDD + I + R + + + +S A + ++ G+ PD+ T NI
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ C +I A L + K IT+ +IKGLC +V+ A + +G
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIE 181
+ I+Y T++ GL + R + +L RK++
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 243/450 (54%), Gaps = 15/450 (3%)
Query: 66 STAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTL 125
+TAI + + G+ ++ + NI+I+ C +I A +L + KGY P+ I+++T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 126 IKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLV 185
+ G C G++ + + + +G N YG++I LC++ + + + ++ + +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
PD V+Y T+ID CK + A + EM + I P V+T+ ++I GFC +G + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
L EM K + PD T+ L++ +CK G +K+A V M++ G PNVVTYT+L+DG C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+++ A +L+ M + G+ PN+ +YN+++NGLCK ++EA+ L E + + +TV
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
TY +L+DA CKS +DKA ++K++ +G+QP + T+N+LM+G C
Sbjct: 528 ---------------TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
G L++ ++++ +L KG T+ ++ C A + M G PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGL 515
T+E +++ + +A L +EM +G
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 230/441 (52%), Gaps = 21/441 (4%)
Query: 81 TPDIVTLNILINCYCHQAQ--ITSAFSVLAKIL---KKGYQPNTITFTTLIKGLCLNGQV 135
+ D+ LI+ + + + +T +F +L K + + F + L G +
Sbjct: 132 SKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLL 191
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCK-MGQTRASLQLLRKIEGKLVKPDVVMYNT 194
+ A + + ++ G L+ S + L K +T ++ + R+ V +V YN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
+I +C+ + +A +L M P V+++++++ G+C G+L + L++ M K
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+ P+ Y Y ++ C+ K+ EA + M++QG+ P+ V YT+L+DG+C ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
M R +TP+V +Y +I+G C+I + EA LF EM CK + P++VTF LI+G
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
CK+ + DA +H+ +A G P+V TY L+DGLC+EG L +A
Sbjct: 432 CKAG-----HMKDAFRVHNHMIQA----------GCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E++ ++ G + TY ++NGLCK G +EA+ L+ + E G D +T+ T++ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 495 FEKGENYKAEKLLREMMARGL 515
+ GE KA+++L+EM+ +GL
Sbjct: 537 CKSGEMDKAQEILKEMLGKGL 557
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 198/386 (51%), Gaps = 15/386 (3%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F+ ++R P + + ++ K A +++ ITPD++T +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
+ A + ++ KG +P+++TFT LI G C G ++ A + H+H++ G N ++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y TLI+GLCK G ++ +LL ++ ++P++ YN+I++ LCK + +A L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
A + VT+ +L+ +C G++ +A +L EM+ K + P + T+N+L++ FC G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+ +L M+ +G+ PN T+ SL+ YC+ + + A I M RGV P+ ++Y ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
G CK + + EA LF EM K + T++ LI G K
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL--------------- 683
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMD 422
+A + ++R +G+ D ++ D
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSD 709
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 228/480 (47%), Gaps = 37/480 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D V + + R P +G I+ L ++ + A ++ GI PD V
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ +C + I +A ++ + P+ +T+T +I G C G + A + + +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +++ LING CK G + + ++ + P+VV Y T+ID LCK+ + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L EM + + P++ T+NS++ G C G ++EA+ L+ E +N D TY L+DA
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+CK G++ +A +L M+ +G++P +VT+ LM+G+CL + + +LN M +G+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
++N+++ C + A ++ +M + + P+ T+ +L+ G
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG--------------- 640
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
CK+ ++ +A L ++++ +G V TY++L+ G + + A+EV + +G
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
E S + G PD TI+ + E ENY ++ LR
Sbjct: 701 -----------------KEIFDFFSDTKYKGKRPD-----TIVDPIDEIIENYLVDEQLR 738
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 68/119 (57%)
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
AI + ++ + G+ +V +YNI++ +C+ GR+K A ++ + KGY V +Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G C+ G D+ L+ M+ G P++ + +II L + +AE+ EM+ +G+L
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 243/450 (54%), Gaps = 15/450 (3%)
Query: 66 STAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTL 125
+TAI + + G+ ++ + NI+I+ C +I A +L + KGY P+ I+++T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 126 IKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLV 185
+ G C G++ + + + +G N YG++I LC++ + + + ++ + +
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
PD V+Y T+ID CK + A + EM + I P V+T+ ++I GFC +G + EA
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
L EM K + PD T+ L++ +CK G +K+A V M++ G PNVVTYT+L+DG C
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+++ A +L+ M + G+ PN+ +YN+++NGLCK ++EA+ L E + + +TV
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
TY +L+DA CKS +DKA ++K++ +G+QP + T+N+LM+G C
Sbjct: 528 ---------------TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
G L++ ++++ +L KG T+ ++ C A + M G PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGL 515
T+E +++ + +A L +EM +G
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 230/441 (52%), Gaps = 21/441 (4%)
Query: 81 TPDIVTLNILINCYCHQAQ--ITSAFSVLAKIL---KKGYQPNTITFTTLIKGLCLNGQV 135
+ D+ LI+ + + + +T +F +L K + + F + L G +
Sbjct: 132 SKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLL 191
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCK-MGQTRASLQLLRKIEGKLVKPDVVMYNT 194
+ A + + ++ G L+ S + L K +T ++ + R+ V +V YN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
+I +C+ + +A +L M P V+++++++ G+C G+L + L++ M K
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+ P+ Y Y ++ C+ K+ EA + M++QG+ P+ V YT+L+DG+C ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
M R +TP+V +Y +I+G C+I + EA LF EM CK + P++VTF LI+G
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
CK+ + DA +H+ +A G P+V TY L+DGLC+EG L +A
Sbjct: 432 CKAG-----HMKDAFRVHNHMIQA----------GCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E++ ++ G + TY ++NGLCK G +EA+ L+ + E G D +T+ T++ A
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 495 FEKGENYKAEKLLREMMARGL 515
+ GE KA+++L+EM+ +GL
Sbjct: 537 CKSGEMDKAQEILKEMLGKGL 557
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 198/386 (51%), Gaps = 15/386 (3%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F+ ++R P + + ++ K A +++ ITPD++T +I+ +C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
+ A + ++ KG +P+++TFT LI G C G ++ A + H+H++ G N ++
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y TLI+GLCK G ++ +LL ++ ++P++ YN+I++ LCK + +A L E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
A + VT+ +L+ +C G++ +A +L EM+ K + P + T+N+L++ FC G ++
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+ +L M+ +G+ PN T+ SL+ YC+ + + A I M RGV P+ ++Y ++
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
G CK + + EA LF EM K + T++ LI G K
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL--------------- 683
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMD 422
+A + ++R +G+ D ++ D
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSD 709
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 228/480 (47%), Gaps = 37/480 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D V + + R P +G I+ L ++ + A ++ GI PD V
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ +C + I +A ++ + P+ +T+T +I G C G + A + + +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +++ LING CK G + + ++ + P+VV Y T+ID LCK+ + A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L EM + + P++ T+NS++ G C G ++EA+ L+ E +N D TY L+DA
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+CK G++ +A +L M+ +G++P +VT+ LM+G+CL + + +LN M +G+ PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
++N+++ C + A ++ +M + + P+ T+ +L+ G
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG--------------- 640
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
CK+ ++ +A L ++++ +G V TY++L+ G + + A+EV + +G
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
E S + G PD TI+ + E ENY ++ LR
Sbjct: 701 -----------------KEIFDFFSDTKYKGKRPD-----TIVDPIDEIIENYLVDEQLR 738
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 68/119 (57%)
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
AI + ++ + G+ +V +YNI++ +C+ GR+K A ++ + KGY V +Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G C+ G D+ L+ M+ G P++ + +II L + +AE+ EM+ +G+L
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 259/483 (53%), Gaps = 15/483 (3%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
+ +FN ++ + P + + ++ SL ++K S A + +E TG +IV N+LI+
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C + ++ A + + K +P+ +T+ TL+ GLC + + L+ D ++ F
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
++ + +L+ GL K G+ +L L++++ V P++ +YN +IDSLCK +A L+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M + + P+ VT++ LI FC G+L A++ L EMV + VY YN L++ CK
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G + A +A M+ + ++P VVTYTSLM GYC ++NKA + + M +G+ P++ ++
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
T+++GL + ++ +A+ LF EM N+ PN VT+N +I+G C+ ++
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMS----------- 559
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
KA +K++ ++GI PD +Y L+ GLC G+ A+ + L + Y
Sbjct: 560 ----KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
T +++G C+EG +EAL++ +M G D + + +I + + LL+EM
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 513 RGL 515
RGL
Sbjct: 676 RGL 678
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 257/502 (51%), Gaps = 22/502 (4%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+F+R+ ++ P + + ++ + TA+S ++ TG+ + N LIN +C
Sbjct: 389 LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHC 448
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
I++A +A+++ K +P +T+T+L+ G C G++ AL+ + + +G +
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
++ TL++GL + G R +++L ++ VKP+ V YN +I+ C++ ++ AF EM
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
I+P ++ LI+G C+ GQ EA +D + N + Y L+ FC+EGK+
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
+EA +V M+++GV ++V Y L+DG + +L M RG+ P+ Y +M
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------------ 377
I+ K EA ++ M + VPN VT+ ++I+GLCK+
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 378 --NIITYNSLLDALCKSH-HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
N +TY LD L K + KA+ L I +G+ + TYN+L+ G C +GR++ A
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E+I ++ G TYT MIN LC+ +A+ L + M + G PD + + T+I
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 495 FEKGENYKAEKLLREMMARGLL 516
GE KA +L EM+ +GL+
Sbjct: 868 CVAGEMGKATELRNEMLRQGLI 889
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 230/454 (50%), Gaps = 20/454 (4%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
P++ TL+ L++ A + ++ G +P+ +T +I+ LC + A +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
H+ A G +N + Y LI+GLCK + ++ + + + GK +KPDVV Y T++ LCK
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ EM+ +R PS +SL+ G G+++EA+ L+ +V ++P+++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
YN L+D+ CK K EA + M K G++PN VTY+ L+D +C +++ A L M
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---- 377
G+ +V YN++ING CK + A AEM K + P VT+ SL+ G C
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 378 ----------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
+I T+ +LL L ++ + A+ L ++ + ++P+ TYN+++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
+G CEEG + A E ++++ KG +Y +I+GLC G EA + + C
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ I + ++ +G+ +A + +EM+ RG+
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 237/494 (47%), Gaps = 25/494 (5%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
V + V I L P ++ + ++ L K++ + + + ++ +P +
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ L+ + +I A +++ +++ G PN + LI LC + A D +
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G N ++Y LI+ C+ G+ +L L ++ +K V YN++I+ CK ++
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A +EM+ ++ P+VVT+ SL+ G+C G++ +A+ L EM K I P +YT+ L+
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ G +++A + M + VKPN VTY +++GYC +++KA L M ++G+ P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------- 377
+ SY +I+GLC EA + N N + + L+ G C+
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 378 ----------NIITYNSLLDALCKSHHVDKAI--ALIKKIRDQGIQPDVRTYNILMDGLC 425
+++ Y L+D K H D+ + L+K++ D+G++PD Y ++D
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLK--HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ G K A + ++ +G TYT +INGLCK G +EA L SKM+ +P+ +
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQV 753
Query: 486 TFETIIRALFEKGE 499
T+ + L KGE
Sbjct: 754 TYGCFLDIL-TKGE 766
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 193/407 (47%), Gaps = 70/407 (17%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++ + +++ + P I F +L+ L + A+ L +++ + P+ VT N+
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I YC + ++ AF L ++ +KG P+T ++ LI GLCL GQ A F D +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQ---------------------------------- 175
LN+I Y L++G C+ G+ +L
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 176 -LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
LL+++ + +KPD V+Y ++ID+ K +AF ++ M+ +P+ VT+ ++I G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 235 CIVGQLKEAIALLDEM-----------------------------------VTKNINPDV 259
C G + EA L +M + K + +
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
TYN+L+ FC++G+++EA+ ++ M+ GV P+ +TYT++++ C ++V KA + NS
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
M ++G+ P+ +YNT+I+G C + +A L EM + ++PN T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 247/488 (50%), Gaps = 23/488 (4%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
+E L +V+ + + G PDI+ LI +C + A +L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ G P+ IT+ +I G C G++ AL D + + ++Y T++ LC G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGK 219
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
+ ++++L ++ + PDV+ Y +I++ C+D+ V A L EM P VVT+N
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
L+ G C G+L EAI L++M + P+V T+NI++ + C G+ +A +LA M+++G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+VVT+ L++ C + +A IL MPQ G PN SYN +++G CK K +D A+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDAL 389
M + P+ VT+N+++ LCK +ITYN+++D L
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
K+ KAI L+ ++R + ++PD TY+ L+ GL EG++ A + + G
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
T+ ++ GLCK D A+ L M + GC P+ ++ +I L +G +A +LL E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 510 MMARGLLE 517
+ +GL++
Sbjct: 580 LCNKGLMK 587
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 249/455 (54%), Gaps = 23/455 (5%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P II ++ ++ A + LE +G PD++T N++I+ YC +I +A SV
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ P+ +T+ T+++ LC +G+++ A++ D ++ + + + I+Y LI C+
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+++LL ++ + PDVV YN +++ +CK+ + +A ++M + P+V+T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
N ++ C G+ +A LL +M+ K +P V T+NIL++ C++G + A ++L M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G +PN ++Y L+ G+C ++++A L M RG P++ +YNTM+ LCK V+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLL 386
+A+ + ++ K P +T+N++IDGL K+ + ITY+SL+
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
L + VD+AI + GI+P+ T+N +M GLC+ + A + + ++ +G
Sbjct: 492 GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
+YTI+I GL EG+ EAL LL+++ + G M
Sbjct: 552 PNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 243/454 (53%), Gaps = 37/454 (8%)
Query: 69 ISLSHQLEFTGITPDIVTLNILINCYC------HQAQITSAFSVLAKILKKGYQPNTITF 122
+S + ++E +G+ L + Y H + + S+F++ +
Sbjct: 57 VSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFAL-----------EDVES 105
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
++ + G+++ +F +++V G + I TLI G C++G+TR + ++L +EG
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
PDV+ YN +I CK + +A ++ M + P VVT+N+++ C G+LK+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
A+ +LD M+ ++ PDV TY IL++A C++ V A +L M +G P+VVTY L++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
G C +++A LN MP G PNV ++N ++ +C +A L A+M K P
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSP 342
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
+ VTFN LI+ LC+ ++ +AI +++K+ G QP+ +YN L+
Sbjct: 343 SVVTFNILINFLCRKGLL---------------GRAIDILEKMPQHGCQPNSLSYNPLLH 387
Query: 423 GLCEEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
G C+E ++ A E ++ ++++G YP V TY M+ LCK+G ++A+ +L+++ GC
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIV-TYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
P IT+ T+I L + G+ KA KLL EM A+ L
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 166/310 (53%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP ++ + ++ + K AI + + +G P+++T NI++ C + A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+LA +L+KG+ P+ +TF LI LC G + A+ + + G N +SY L++G C
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
K + +++ L ++ + PD+V YNT++ +LCKD V DA + +++ + P ++
Sbjct: 391 KEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLI 450
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+N++I G G+ +AI LLDEM K++ PD TY+ LV +EGKV EA
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEF 510
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+ G++PN VT+ S+M G C + ++A L M RG PN SY +I GL M
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 346 DEALNLFAEM 355
EAL L E+
Sbjct: 571 KEALELLNEL 580
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 152/296 (51%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ + N + P +I IL S+ + A L + G +P +VT NI
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LIN C + + A +L K+ + G QPN++++ L+ G C ++ A+++ + +V++G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ + ++Y T++ LCK G+ ++++L ++ K P ++ YNT+ID L K A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L EM A + P +T++SL+ G G++ EAI E I P+ T+N ++
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
CK + A + L M+ +G KPN +YT L++G +A +LN + +G+
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 198/331 (59%), Gaps = 19/331 (5%)
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+++ G +P+ +TFTTL+ GLC G+V AL D +V +G YGT+INGLCKMG
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
T ++L LL K+E +K VV+YN IID LCKD A NL++EM I P V+T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
+I FC G+ +A LL +M+ + INPDV T++ L++A KEGKV EA + M+++G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
+ P +TY S++DG+C +N AK +L+SM + +P+V +++T+ING CK K VD +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+F EM + IV NTVT+ +LI G C+ +D A L+ + G
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVG---------------DLDAAQDLLNVMISSG 281
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+ P+ T+ ++ LC + L+ A +++DL
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 170/325 (52%), Gaps = 19/325 (5%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
+PDVV + T+++ LC + V A L MV P + ++I G C +G + A+
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALN 62
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
LL +M +I V YN ++D CK+G A N+ M +G+ P+V+TY+ ++D +C
Sbjct: 63 LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
A+ +L M +R + P+V +++ +IN L K V EA ++ +M + I P T
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT- 181
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
ITYNS++D CK ++ A ++ + + PDV T++ L++G C
Sbjct: 182 --------------ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ R+ N E+ ++ +G TYT +I+G C+ G D A LL+ M +G P+ I
Sbjct: 228 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYI 287
Query: 486 TFETIIRALFEKGENYKAEKLLREM 510
TF++++ +L K E KA +L ++
Sbjct: 288 TFQSMLASLCSKKELRKAFAILEDL 312
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 170/313 (54%), Gaps = 39/313 (12%)
Query: 78 TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
TG PD+VT L+N C + ++ A +++ +++++G+QP + T+I GLC G ++
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTES 59
Query: 138 ALQF-----------H--------DHVVAQGFHLNQ----------------ISYGTLIN 162
AL H D + G H++ I+Y +I+
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 163 GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
C+ G+ + QLLR + + + PDVV ++ +I++L K+ V++A +Y +M+ I P
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+ +T+NS+I GFC +L +A +LD M +K+ +PDV T++ L++ +CK +V +
Sbjct: 180 TTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIF 239
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
M ++G+ N VTYT+L+ G+C V +++ A+ +LN M GV PN ++ +M+ LC
Sbjct: 240 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSK 299
Query: 343 KMVDEALNLFAEM 355
K + +A + ++
Sbjct: 300 KELRKAFAILEDL 312
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 19/301 (6%)
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
MV P VVTF +L+ G C G++ +A+AL+D MV + P Y +++ CK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
+ A N+L+ M + +K +VV Y +++D C A+ + M +G+ P+V +Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
MI+ C+ +A L +M + I P+ VTF++LI+ AL K
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALIN---------------ALVKEGK 161
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
V +A + + +GI P TYN ++DG C++ RL +A+ ++ + +K V T++
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ING CK D + + +M G + + +T+ T+I + G+ A+ LL M++ G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 515 L 515
+
Sbjct: 282 V 282
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 142/253 (56%), Gaps = 26/253 (10%)
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M++ G +P+VVT+T+LM+G C V +A +++ M + G P Y T+INGLCK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNS 384
+ ALNL ++M+ +I + V +N++ID LCK ++ITY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
++D+ C+S A L++ + ++ I PDV T++ L++ L +EG++ A+E+ D+L +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 445 -YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
+P T+ TY MI+G CK+ ++A +L M C PD +TF T+I +
Sbjct: 177 IFPTTI-TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 504 EKLLREMMARGLL 516
++ EM RG++
Sbjct: 236 MEIFCEMHRRGIV 248
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
+++ +R++ P +G I+ L KM +A++L ++E T I +V N +I+
Sbjct: 29 ALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIID 84
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C A ++ ++ KG P+ IT++ +I C +G+ A Q ++ + +
Sbjct: 85 RLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINP 144
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ +++ LIN L K G+ + ++ + + + P + YN++ID CK + DA +
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M + P VVTF++LI G+C ++ + + EM + I + TY L+ FC+
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 264
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
G + A ++L VM+ GV PN +T+ S++ C E+ KA IL + +
Sbjct: 265 GDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 139/259 (53%), Gaps = 3/259 (1%)
Query: 32 DVVSIFNRLLRMSPT---PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
D S N L +M T ++ + I+ L K H+ A +L ++ GI PD++T +
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I+ +C + T A +L ++++ P+ +TF+ LI L G+V A + + ++ +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G I+Y ++I+G CK + + ++L + K PDVV ++T+I+ CK V +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ EM I+ + VT+ +LI+GFC VG L A LL+ M++ + P+ T+ ++ +
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 269 FCKEGKVKEATNVLAVMMK 287
C + ++++A +L + K
Sbjct: 296 LCSKKELRKAFAILEDLQK 314
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + I+ +LR P I + ++ K + A + + +PD+VT +
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LIN YC ++ + + ++ ++G NT+T+TTLI G C G + A + +++ G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 150 FHLNQISYGTLINGLCKMGQTR---ASLQLLRKIEG 182
N I++ +++ LC + R A L+ L+K EG
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/541 (28%), Positives = 260/541 (48%), Gaps = 58/541 (10%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ VS+F + + S + ++ LV+ +++ A S ++ T + V+L+ L+
Sbjct: 56 NAVSVFQQAVD-SGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLL 114
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
CY + AF VLA +LK+G+ N L+KGLC N + A+ +
Sbjct: 115 ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+ SY T+I G C+ + +L+L +++G +V + +ID+ CK + +A
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
EM M + +V + SLI GFC G+L AL DE++ + +P TYN L+ FCK
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G++KEA+ + M+++GV+PNV TYT L+DG C V + +A +LN M ++ PN +
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-------------- 377
YN +IN LCK +V +A+ + M + P+ +T+N L+ GLC
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Query: 378 --------NIITYNSLLDALCKSHH----------------------------------- 394
++I+YN+L+ LCK +
Sbjct: 415 KDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGD 474
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
V+KA+ L K+I D I + TY ++DG C+ G L A+ ++ + +V Y
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+++ LCKEG D+A L +M+ + PD ++F +I + G+ AE LL M G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 515 L 515
L
Sbjct: 595 L 595
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 267/506 (52%), Gaps = 22/506 (4%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
VS+ + R S P + + ++ + K A+ L+++++ +G + +VT ILI+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
+C ++ A L ++ G + + + +T+LI+G C G++ D V+ +G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
I+Y TLI G CK+GQ + + ++ + + V+P+V Y +ID LC +A L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
+ M+ P+ VT+N +I C G + +A+ +++ M + PD TYNIL+ C +
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK 400
Query: 273 GKVKEATNVLAVMMKQG--VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
G + EA+ +L +M+K P+V++Y +L+ G C + +++A I + + ++ +
Sbjct: 401 GDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------- 377
+ N ++N K V++A+ L+ ++ IV N+ T+ ++IDG CK+
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 378 -------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
++ YN LL +LCK +D+A L ++++ PDV ++NI++DG + G +
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDI 580
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
K+A+ ++ + G + TY+ +IN K G DEA++ KM D+G PDA +++
Sbjct: 581 KSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSV 640
Query: 491 IRALFEKGENYKAEKLLREMMARGLL 516
++ +GE K +L+++++ + ++
Sbjct: 641 LKYCISQGETDKLTELVKKLVDKDIV 666
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 215/436 (49%), Gaps = 22/436 (5%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ + + M ++ + ++ +L ++ G +P +T N
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI +C Q+ A + ++++G +PN T+T LI GLC G+ + ALQ + ++ +
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N ++Y +IN LCK G +++++ ++ + +PD + YN ++ LC + +A
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 210 NLYSEMV--AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L M+ + P V+++N+LI+G C +L +A+ + D +V K D T NIL++
Sbjct: 408 KLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLN 467
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ K G V +A + + + N TYT+++DG+C +N AK +L M + P
Sbjct: 468 STLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQP 527
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------- 377
+V YN +++ LCK +D+A LF EM N P+ V+FN +IDG K+
Sbjct: 528 SVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Query: 378 ----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
++ TY+ L++ K ++D+AI+ K+ D G +PD + ++ +
Sbjct: 588 VGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ 647
Query: 428 GRLKNAQEVIQDLLTK 443
G E+++ L+ K
Sbjct: 648 GETDKLTELVKKLVDK 663
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 168/354 (47%), Gaps = 2/354 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ + + + N ++ P + + I+ L K + A+ + ++ PD +T
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGY--QPNTITFTTLIKGLCLNGQVQTALQFHDH 144
NIL+ C + + A +L +LK P+ I++ LI GLC ++ AL +D
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+V + ++++ L+N K G +++L ++I + + Y +ID CK +
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ A L +M + PSV +N L+ C G L +A L +EM N PDV ++NI
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
++D K G +K A ++L M + G+ P++ TY+ L++ + + +++A + M G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
P+ ++++ D+ L ++ K+IV + +++D +C S+
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSS 683
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 260/519 (50%), Gaps = 56/519 (10%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ +L SL K+ A ++E G ++ ++N C +A ++KIL
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ-GFHLNQISYGTLINGLCKMGQT 170
K G+ ++ T+L+ G C ++ AL+ D + + N +SY LI+GLC++G+
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ L ++ K +P Y +I +LC L+ AFNL+ EM+ P+V T+ L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I G C G+++EA + +MV I P V TYN L++ +CK+G+V A +L VM K+
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
KPNV T+ LM+G C V + KA ++L M G++P++ SYN +I+GLC+ ++ A
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALC 390
L + M+C +I P+ +TF ++I+ CK + +T +L+D +C
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 391 K---------------------SHH--------------VDKAIALIKKIRDQGIQPDVR 415
K + H V + +A++ KI G+ P V
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
TY L+DGL G + + +++ + G V YTI+INGLC+ G +EA LLS M
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+D+G P+ +T+ +++ G+ +A + +R M+ RG
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 234/452 (51%), Gaps = 21/452 (4%)
Query: 29 NVDDVVSIFNRLLR-MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
N+ D + +F+ + + ++ P + + ++ L ++ A L Q+ G P T
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+LI C + I AF++ +++ +G +PN T+T LI GLC +G+++ A +V
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ I+Y LING CK G+ + +LL +E + KP+V +N +++ LC+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A +L M+ + P +V++N LI G C G + A LL M +I PD T+ +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
AFCK+GK A+ L +M+++G+ + VT T+L+DG C V + A +IL ++ + +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL------------- 374
S N +++ L K V E L + +++ +VP+ VT+ +L+DGL
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604
Query: 375 -------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
C N+ Y +++ LC+ V++A L+ ++D G+ P+ TY +++ G
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
G+L A E ++ ++ +GY + R Y+ ++ G
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 188/391 (48%), Gaps = 51/391 (13%)
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF LN Y +L+ L K+ + R++E ++ Y TI+++LCK+ A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 209 FNLYSEMV--------------------------AMRIL----------PSVVTFNSLIY 232
S+++ A+++ P+ V+++ LI+
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G C VG+L+EA L D+M K P TY +L+ A C G + +A N+ M+ +G KP
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
NV TYT L+DG C ++ +A + M + + P+V +YN +ING CK V A L
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
M+ + PN TFN L++GLC+ K + KA+ L+K++ D G+ P
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVG------------KPY---KAVHLLKRMLDNGLSP 439
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
D+ +YN+L+DGLC EG + A +++ + T+T +IN CK+G D A L
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKA 503
M G D +T T+I + + G+ A
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 215/433 (49%), Gaps = 37/433 (8%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + F +++ L ++ A+ L ++ G++PDIV+ N+LI+ C + + +A+ +
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L+ + +P+ +TFT +I C G+ A F ++ +G L++++ TLI+G+CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+G+TR +L +L + + N I+D L K V + + ++ + ++PSVVT
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+ +L+ G G + + +L+ M P+VY Y I+++ C+ G+V+EA +L+ M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING--LCKIKM 344
GV PN VTYT ++ GY ++++A + +M +RG N + Y++++ G L + +
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703
Query: 345 VDEALNLFAEMDCKNIVPNTVT--------FNSLIDGLC--------------KSNIITY 382
+ + +++ + P + I GLC +SN +
Sbjct: 704 DNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQ 763
Query: 383 NSL-------------LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
N L +++ C K + LI + G P +++ +++ GL +EG
Sbjct: 764 NVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGD 823
Query: 430 LKNAQEVIQDLLT 442
+ A+E++ +LLT
Sbjct: 824 AERARELVMELLT 836
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 263/551 (47%), Gaps = 82/551 (14%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +L S +K + L + GI P T N+LI C + + +A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ +KG +PN TF L++G C G L+ + + + G N++ Y T+++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL----P 222
G+ S +++ K+ + + PD+V +N+ I +LCK+ V DA ++S+M L P
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 223 SVVTFNSLIYGFCIVGQLK-----------------------------------EAIALL 247
+ +T+N ++ GFC VG L+ EA +L
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+M K I P +Y+YNIL+D CK G + +A ++ +M + GV P+ VTY L+ GYC V
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+V+ AK +L M + PN + N +++ L K+ + EA L +M+ K +TVT
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 368 NSLIDGLCKS-------------------------------------------NIITYNS 384
N ++DGLC S ++ITY++
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
LL+ LCK+ +A L ++ + +QPD YNI + C++G++ +A V++D+ KG
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
++ TY +I GL + E L+ +M++ G P+ T+ T I+ L E + A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 505 KLLREMMARGL 515
LL EMM + +
Sbjct: 650 NLLDEMMQKNI 660
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 238/505 (47%), Gaps = 39/505 (7%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D ++F + + + L LV+ + A ++ Q+ GI P I + NI
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ C ++ A +++ + + G P+ +T+ L+ G C G+V A ++
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N + L++ L KMG+ + +LLRK+ K D V N I+D LC + A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 210 NLYSEM-----------------------VAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
+ M + LP ++T+++L+ G C G+ EA L
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
EM+ + + PD YNI + FCK+GK+ A VL M K+G ++ TY SL+ G +
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+++ + +++ M ++G++PN+ +YNT I LC+ + V++A NL EM KNI PN +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
F LI+ CK + D + A+++ + +G+ Y+++ + L
Sbjct: 667 FKYLIEAFCK--------VPDFDMAQEVFETAVSICGQ--KEGL------YSLMFNELLA 710
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G+L A E+++ +L +G+ + Y ++ LCK+ + A +L KM D G D
Sbjct: 711 AGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAA 770
Query: 487 FETIIRALFEKGENYKAEKLLREMM 511
+I L + G +A +MM
Sbjct: 771 LMPVIDGLGKMGNKKEANSFADKMM 795
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 230/491 (46%), Gaps = 42/491 (8%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D + + N + P + + I++S + + + ++ G+ PDIVT N
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 91 INCYCHQAQITSAFSVLAKILKKGY----QPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
I+ C + ++ A + + + Y +PN+IT+ ++KG C G ++ A + +
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIR 318
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+ SY + GL + G+ + +L+++ K + P + YN ++D LCK +++
Sbjct: 319 ENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLS 378
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
DA + M + P VT+ L++G+C VG++ A +LL EM+ N P+ YT NIL+
Sbjct: 379 DAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ K G++ EA +L M ++G + VT ++DG C E++KA I+ M G
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 327 -----------------------PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPN 363
P++ +Y+T++NGLCK EA NLFAEM + + P+
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 364 TVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
+V +N I CK I+ A ++K + +G + TYN L+ G
Sbjct: 559 SVAYNIFIHHFCKQGKIS---------------SAFRVLKDMEKKGCHKSLETYNSLILG 603
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
L + ++ ++ ++ KG + TY I LC+ ++A LL +M P+
Sbjct: 604 LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Query: 484 AITFETIIRAL 494
+F+ +I A
Sbjct: 664 VFSFKYLIEAF 674
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 185/353 (52%), Gaps = 24/353 (6%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
KP V +YN +++S K+ V LY +MV I P TFN LI C + A
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
L DEM K P+ +T+ ILV +CK G + +L M GV PN V Y +++ +C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV---- 361
+ ++ ++ M + G+ P++ ++N+ I+ LCK V +A +F++M+ +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 362 PNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIAL 401
PN++T+N ++ G CK +++ +YN L L + +A +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 402 IKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK 461
+K++ D+GI P + +YNILMDGLC+ G L +A+ ++ + G TY +++G C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 462 EGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
G D A +LL +M N C+P+A T ++ +L++ G +AE+LLR+M +G
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG 461
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 209/447 (46%), Gaps = 47/447 (10%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+P+ + L++ +V+ + +V G ++ LI LC A+ +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
L ++ K KP+ + ++ CK L L + M + +LP+ V +N+++ FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV----K 291
G+ ++ ++++M + + PD+ T+N + A CKEGKV +A+ + + M +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PN +TY ++ G+C V + AK + S+ + ++QSYN + GL + EA +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCK 391
+M K I P+ ++N L+DGLCK + +TY LL C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
VD A +L++++ P+ T NIL+ L + GR+ A+E+++ + KGY + T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 452 YTIMINGLCKEGLFDEALTLLSKME-----------------------DNGCMPDAITFE 488
I+++GLC G D+A+ ++ M +N C+PD IT+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 489 TIIRALFEKGENYKAEKLLREMMARGL 515
T++ L + G +A+ L EMM L
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 69/275 (25%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
PD++T + L+N C + A ++ A+++ + QP+++ + I C G++ +A +
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
+ +G H + +Y +LI GL Q L+ +++ K + P++ YNT I LC+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV------------------------ 237
V DA NL EM+ I P+V +F LI FC V
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 238 ----------GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE--------------- 272
GQL +A LL+ ++ + + Y LV++ CK+
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 273 --------------------GKVKEATNVLAVMMK 287
G KEA + MM+
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 77/141 (54%)
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
K ++ YN LL++ K V+ L K + GI P T+N+L+ LC+ + A+E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+ ++ KG T+ I++ G CK GL D+ L LL+ ME G +P+ + + TI+ +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 496 EKGENYKAEKLLREMMARGLL 516
+G N +EK++ +M GL+
Sbjct: 229 REGRNDDSEKMVEKMREEGLV 249
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 260/541 (48%), Gaps = 56/541 (10%)
Query: 31 DDVVSIFNRLLRMSPTPPIIE-FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
D + +F R+ + P I + +L + V+ K + SL E G+ P++ T N+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI C + + A L + K+G++P+ +++T+I L G++ AL+ D + +G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLL-RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ Y LI+G K + +++L R +E V P+V +N +I L K V D
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ M + T++SLI+G C G + +A ++ +E+ + + DV TYN ++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 269 FCKEGKVKE----------------------------------ATNVLAVMMKQGVKPNV 294
FC+ GK+KE AT + +M +G +
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY + G C+ VNKA ++ + G +V +Y ++I+ LCK K ++EA NL E
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 355 MDCKNIVPNTVTFNSLIDGL--------------------CKSNIITYNSLLDALCKSHH 394
M + N+ N+LI GL C+ +++YN L+ LCK+
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+A A +K++ + G +PD++TY+IL+ GLC + ++ A E+ L G V + I
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+I+GLC G D+A+T+++ ME C + +T+ T++ F+ G++ +A + M G
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 515 L 515
L
Sbjct: 635 L 635
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 233/466 (50%), Gaps = 17/466 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQL-EFTGITPDIVTLN 88
+DD + +F+ + P + + ++ +K K + TA+ L +L E + + P++ T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
I+I+ ++ + ++ + + + T+++LI GLC G V A + + +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
++ ++Y T++ G C+ G+ + SL+L R +E K ++V YN +I L ++ + +A
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK-NSVNIVSYNILIKGLLENGKIDEA 378
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ M A T+ I+G C+ G + +A+ ++ E+ + + DVY Y ++D
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDC 438
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK+ +++EA+N++ M K GV+ N +L+ G S + +A + L M + G P
Sbjct: 439 LCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPT 498
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V SYN +I GLCK EA EM ++ K ++ TY+ LL
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEM---------------LENGWKPDLKTYSILLCG 543
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
LC+ +D A+ L + G++ DV +NIL+ GLC G+L +A V+ ++ +
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
+ TY ++ G K G + A + M G PD I++ TI++ L
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 216/430 (50%), Gaps = 16/430 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VDD + I+ R+ + + + ++ L + A S+ ++L+ + D+VT N
Sbjct: 271 VDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNT 330
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++ +C +I + L +I++ N +++ LIKGL NG++ A + A+G
Sbjct: 331 MLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++ +YG I+GLC G +L +++++E DV Y +IID LCK + +A
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
NL EM + + N+LI G +L EA L EM P V +YNIL+
Sbjct: 450 NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGL 509
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK GK EA+ + M++ G KP++ TY+ L+ G C +++ A + + Q G+ +V
Sbjct: 510 CKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDV 569
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+N +I+GLC + +D+A+ + A M+ +N C +N++TYN+L++
Sbjct: 570 MMHNILIHGLCSVGKLDDAMTVMANMEHRN---------------CTANLVTYNTLMEGF 614
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
K ++A + + G+QPD+ +YN +M GLC + A E D G TV
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674
Query: 450 RTYTIMINGL 459
T+ I++ +
Sbjct: 675 YTWNILVRAV 684
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 194/393 (49%), Gaps = 16/393 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NVD S+FN L + ++ + +L + ++ L +E + +IV+ N
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI +I A + + KGY + T+ I GLC+NG V AL V +
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G HL+ +Y ++I+ LCK + + L++++ V+ + + N +I L +D+ + +A
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
EM P+VV++N LI G C G+ EA A + EM+ PD+ TY+IL+
Sbjct: 484 SFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG 543
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C++ K+ A + ++ G++ +V+ + L+ G C V +++ A ++ +M R T N
Sbjct: 544 LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+ +YNT++ G K+ + A ++ M + P+ +++N+++ GLC ++Y
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY------ 657
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
A+ R+ GI P V T+NIL+
Sbjct: 658 ---------AMEFFDDARNHGIFPTVYTWNILV 681
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 217/463 (46%), Gaps = 73/463 (15%)
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMG 168
K+LK P F G +A+ +H H+ L ++S ++N + ++
Sbjct: 15 KLLKSEKNPRA-AFALFDSATRHPGYAHSAVVYH-HI------LRRLSETRMVNHVSRI- 65
Query: 169 QTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM-RILPSVVTF 227
++L+R E K DV + ++I + K+++ A +++ M + P++ ++
Sbjct: 66 -----VELIRSQECK-CDEDVAL--SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSY 117
Query: 228 NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
N+L+ F Q + +L T + P++ TYN+L+ CK+ + ++A L M K
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
+G KP+V +Y+++++ +++ A + + M +RGV P+V YN +I+G K K
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKT 237
Query: 348 ALNLFAE-MDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLL 386
A+ L+ ++ ++ PN T N +I GL K ++ TY+SL+
Sbjct: 238 AMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLI 297
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE----------- 435
LC + +VDKA ++ ++ ++ DV TYN ++ G C G++K + E
Sbjct: 298 HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV 357
Query: 436 -------VIQDLL----------------TKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
+I+ LL KGY TY I I+GLC G ++AL ++
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++E +G D + +II L +K +A L++EM G+
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 254/507 (50%), Gaps = 21/507 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ + F+++ R P +L K+ + G P + T NI
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 267
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+C C + + +A + ++ +G P+T+T+ ++I G G++ + F + +
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 327
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ I+Y LIN CK G+ L+ R+++G +KP+VV Y+T++D+ CK+ ++ A
Sbjct: 328 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
Y +M + ++P+ T+ SLI C +G L +A L +EM+ + +V TY L+D
Sbjct: 388 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGL 447
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C ++KEA + M GV PN+ +Y +L+ G+ +++A +LN + RG+ P++
Sbjct: 448 CDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL 507
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN----------- 378
Y T I GLC ++ ++ A + EM I N++ + +L+D KS
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDE 567
Query: 379 ---------IITYNSLLDALCKSHHVDKAIALIKKIR-DQGIQPDVRTYNILMDGLCEEG 428
++T+ L+D LCK+ V KA+ +I D G+Q + + ++DGLC++
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+++ A + + ++ KG YT +++G K+G EAL L KM + G D + +
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 489 TIIRALFEKGENYKAEKLLREMMARGL 515
+++ L + KA L EM+ G+
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEMIGEGI 714
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 242/490 (49%), Gaps = 21/490 (4%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P F + + L+ + AI +++ + P + N L++ + +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ G +P T+ +I +C G V+ A + + +G + ++Y ++I+G K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+G+ ++ +++ +PDV+ YN +I+ CK + Y EM + P+VV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+++L+ FC G +++AI +M + P+ YTY L+DA CK G + +A + M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ GV+ NVVTYT+L+DG C + +A+ + M GV PN+ SYN +I+G K K +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLC--------------------KSNIITYNSLL 386
AL L E+ + I P+ + + + I GLC K+N + Y +L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK-GY 445
DA KS + + + L+ ++++ I+ V T+ +L+DGLC+ + A + + G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
+T MI+GLCK+ + A TL +M G +PD + +++ F++G +A
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 506 LLREMMARGL 515
L +M G+
Sbjct: 670 LRDKMAEIGM 679
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 241/488 (49%), Gaps = 14/488 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V+ +F + P + + ++ K+ + +++ PD++T N
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LINC+C ++ ++ G +PN ++++TL+ C G +Q A++F+ +
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 396
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N+ +Y +LI+ CK+G + +L ++ V+ +VV Y +ID LC + +A
Sbjct: 397 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 456
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ +M ++P++ ++N+LI+GF + A+ LL+E+ + I PD+ Y +
Sbjct: 457 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C K++ A V+ M + G+K N + YT+LMD Y + ++L+ M + +
Sbjct: 517 LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVT 576
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V ++ +I+GLCK K+V +A++ F N + N GL ++N + +++D
Sbjct: 577 VVTFCVLIDGLCKNKLVSKAVDYF------NRISNDF-------GL-QANAAIFTAMIDG 622
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
LCK + V+ A L +++ +G+ PD Y LMDG ++G + A + + G +
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
+ YT ++ GL +A + L +M G PD + ++++ +E G +A +L
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
Query: 509 EMMARGLL 516
+M LL
Sbjct: 743 YLMKHQLL 750
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 218/456 (47%), Gaps = 21/456 (4%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
P + L + + A +K+ + P T + L+ G+ +F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
++ G +Y +I+ +CK G A+ L +++ + + PD V YN++ID K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ D + EM M P V+T+N+LI FC G+L + EM + P+V +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
Y+ LVDAFCKEG +++A M + G+ PN TYTSL+D C + ++ A + N M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---- 377
Q GV NV +Y +I+GLC + + EA LF +MD ++PN ++N+LI G K+
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 378 ----------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
+++ Y + + LC ++ A ++ ++++ GI+ + Y LM
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME-DNGC 480
D + G ++ ++ VTV T+ ++I+GLCK L +A+ +++ D G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+A F +I L + + A L +M+ +GL+
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 218/449 (48%), Gaps = 18/449 (4%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ +DD V F + M P +I + ++ K + +++ G+ P++V+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+ L++ +C + + A + + G PN T+T+LI C G + A + + ++
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G N ++Y LI+GLC + + + +L K++ V P++ YN +I K +
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A L +E+ I P ++ + + I+G C + +++ A +++EM I + Y L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR-GV 325
DA+ K G E ++L M + ++ VVT+ L+DG C V+KA N + G+
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
N + MI+GLCK V+ A LF +M K +VP+ + SL+DG N
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG----NF------ 659
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG- 444
K +V +A+AL K+ + G++ D+ Y L+ GL +L+ A+ +++++ +G
Sbjct: 660 -----KQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLS 473
+P V +++ + G DEA+ L S
Sbjct: 715 HPDEVLCISVLKKHY-ELGCIDEAVELQS 742
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 152/315 (48%), Gaps = 20/315 (6%)
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
+P F++L +G L+EAI +M + P + N L+ F K GK +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
M+ G +P V TY ++D C +V A+ + M RG+ P+ +YN+MI+G
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC--------------------KSNII 380
K+ +D+ + F EM P+ +T+N+LI+ C K N++
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+Y++L+DA CK + +AI +R G+ P+ TY L+D C+ G L +A + ++
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Query: 441 LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
L G V TYT +I+GLC EA L KM+ G +P+ ++ +I +
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 501 YKAEKLLREMMARGL 515
+A +LL E+ RG+
Sbjct: 489 DRALELLNELKGRGI 503
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-----DCKNIVPNTVTFN 368
K+ SM + G +V+SY + + L +M +A ++ EM DC T N
Sbjct: 127 KFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRN 186
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+C +++L L +++AI K++ + P R+ N L+ + G
Sbjct: 187 -----VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLG 241
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+ + + +D++ G TV TY IMI+ +CKEG + A L +M+ G +PD +T+
Sbjct: 242 KTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYN 301
Query: 489 TIIRALFEKGE 499
++I + G
Sbjct: 302 SMIDGFGKVGR 312
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/478 (28%), Positives = 248/478 (51%), Gaps = 18/478 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N + + + ++R P +I K++ +++ A+ + LE G PD+ N
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYN 162
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LIN +C +I A VL ++ K + P+T+T+ +I LC G++ AL+ + +++
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
I+Y LI G +L+L+ ++ + +KPD+ YNTII +CK+ +V A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
F + + P V+++N L+ G+ +E L+ +M ++ +P+V TY+IL+
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C++GK++EA N+L +M ++G+ P+ +Y L+ +C ++ A L +M G P+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+ +YNT++ LCK D+AL +F ++ PN+ + YN++ A
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS---------------YNTMFSA 447
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
L S +A+ +I ++ GI PD TYN ++ LC EG + A E++ D+ + + +
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
V TY I++ G CK ++A+ +L M NGC P+ T+ +I + G Y+AE +
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG--YRAEAM 563
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 220/425 (51%), Gaps = 15/425 (3%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++ KM A + ++ +PD VT NI+I C + ++ A V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++L QP IT+T LI+ L G V AL+ D ++++G + +Y T+I G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + +++R +E K +PDV+ YN ++ +L + L ++M + + P+VVT
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++ LI C G+++EA+ LL M K + PD Y+Y+ L+ AFC+EG++ A L M+
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
G P++V Y +++ C + ++A I + + G +PN SYNTM + L
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
AL++ EM I P+ ITYNS++ LC+ VD+A L+ +R
Sbjct: 456 RALHMILEMMSNGIDPDE---------------ITYNSMISCLCREGMVDEAFELLVDMR 500
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
P V TYNI++ G C+ R+++A V++ ++ G TYT++I G+ G
Sbjct: 501 SCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 467 EALTL 471
EA+ L
Sbjct: 561 EAMEL 565
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 213/410 (51%), Gaps = 48/410 (11%)
Query: 134 QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYN 193
Q +L F D + + FH + C+ G SL LL + K PDV++
Sbjct: 80 QHSQSLGFRDTQMLKIFHRS-----------CRSGNYIESLHLLETMVRKGYNPDVILCT 128
Query: 194 TIIDSLCKDTLVTDAFNLYSEMVAMRIL--------PSVVTFNSLIYGFCIVGQLKEAIA 245
+I F L + A+R++ P V +N+LI GFC + ++ +A
Sbjct: 129 KLIKGF---------FTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATR 179
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+LD M +K+ +PD TYNI++ + C GK+ A VL ++ +P V+TYT L++
Sbjct: 180 VLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
L V++A +++ M RG+ P++ +YNT+I G+CK MVD A + ++ K P+ +
Sbjct: 240 LEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI 299
Query: 366 TFNSLIDGL--------------------CKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
++N L+ L C N++TY+ L+ LC+ +++A+ L+K +
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+++G+ PD +Y+ L+ C EGRL A E ++ +++ G + Y ++ LCK G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D+AL + K+ + GC P++ ++ T+ AL+ G+ +A ++ EMM+ G+
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGI 469
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 217/440 (49%), Gaps = 21/440 (4%)
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
C + +L +++KGY P+ I T LIKG + A++ + ++ + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+Y LING CKM + + ++L ++ K PD V YN +I SLC + A + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
+++ P+V+T+ LI + G + EA+ L+DEM+++ + PD++TYN ++ CKEG
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
V A ++ + +G +P+V++Y L+ + + + ++ M PNV +Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------- 377
+I LC+ ++EA+NL M K + P+ +++ LI C+
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 378 ---NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+I+ YN++L LCK+ D+A+ + K+ + G P+ +YN + L G A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
+I ++++ G TY MI+ LC+EG+ DEA LL M P +T+ ++
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 495 FEKGENYKAEKLLREMMARG 514
+ A +L M+ G
Sbjct: 519 CKAHRIEDAINVLESMVGNG 538
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 166/322 (51%), Gaps = 16/322 (4%)
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
I C+ ++ +L MV P V+ LI GF + + +A+ ++ E++ K
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKF 153
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
PDV+ YN L++ FCK ++ +AT VL M + P+ VTY ++ C +++ A
Sbjct: 154 GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+LN + P V +Y +I VDEAL L EM + + P+ T+N++I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
CK + VD+A +++ + +G +PDV +YNIL+ L +G+ + +
Sbjct: 274 CKEGM---------------VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
+++ + ++ V TY+I+I LC++G +EA+ LL M++ G PDA +++ +I A
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 495 FEKGENYKAEKLLREMMARGLL 516
+G A + L M++ G L
Sbjct: 379 CREGRLDVAIEFLETMISDGCL 400
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/543 (27%), Positives = 247/543 (45%), Gaps = 66/543 (12%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D +F + + P +I + ++ K L Q G+ D+V +
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
I+ Y + +A V ++L +G PN +T+T LIKGLC +G++ A + ++ +
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + ++Y +LI+G CK G R+ L + PDVV+Y ++D L K L+ A
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+M+ I +VV FNSLI G+C + + EA+ + M I PDV T+ ++
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC----------------------- 305
EG+++EA + M K G++P+ + Y +L+D +C
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 306 ------------LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
+ A N++ + + P++ +YNTMI G C ++ +DEA +F
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSH 393
+ PNTVT LI LCK+ N +TY L+D KS
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
++ + L ++++++GI P + +Y+I++DGLC+ GR+ A + + V Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
I+I G CK G EA L M NG PD + + RAL E Y K L M++
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSE----YNPPKWL---MSK 829
Query: 514 GLL 516
G+
Sbjct: 830 GVW 832
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 230/457 (50%), Gaps = 20/457 (4%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G P++VT LIN +C + ++ AF + + ++G +P+ I ++TLI G G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ + +G L+ + + + I+ K G + + +++ + + P+VV Y +I
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
LC+D + +AF +Y +++ + PS+VT++SLI GFC G L+ AL ++M+ PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V Y +LVD K+G + A M+ Q ++ NVV + SL+DG+C ++ ++A +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-- 376
M G+ P+V ++ T++ ++EAL LF M + P+ + + +LID CK
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM 580
Query: 377 ------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
++I N ++ L K H ++ A + + ++PD+ TYN
Sbjct: 581 KPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYN 640
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
++ G C RL A+ + + L + T TI+I+ LCK D A+ + S M +
Sbjct: 641 TMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G P+A+T+ ++ + + + KL EM +G+
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 252/543 (46%), Gaps = 59/543 (10%)
Query: 32 DVVSIFNRLLRM----SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
D + + +RLL + P P ++ F ++ K A L +E GI PD++
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ LI+ Y + + ++ L KG + + + F++ I +G + TA + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
QG N ++Y LI GLC+ G+ + + +I + ++P +V Y+++ID CK +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
F LY +M+ M P VV + L+ G G + A+ +M+ ++I +V +N L+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+C+ + EA V +M G+KP+V T+T++M + + +A ++ M + G+ P
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMD--------------------CKNIVPNTVTF 367
+ +Y T+I+ CK L LF M C I + F
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFF 624
Query: 368 NSLIDGLCKSNIITYNS-----------------------------------LLDALCKS 392
N+LI+G + +I+TYN+ L+ LCK+
Sbjct: 625 NNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+ +D AI + + ++G +P+ TY LMD + ++ + ++ +++ KG ++ +Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
+I+I+GLCK G DEA + + D +PD + + +IR + G +A L M+
Sbjct: 745 SIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 804
Query: 513 RGL 515
G+
Sbjct: 805 NGV 807
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 228/469 (48%), Gaps = 19/469 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN- 88
VD + IF ++ P ++L SL+ +L GI P V+ +
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 89 -ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+L +C + ++T A ++++G++ ++ ++KGL ++ Q++ A + V+
Sbjct: 222 FVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G N +++ TLING CK G+ + L + +E + ++PD++ Y+T+ID K ++
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+S+ + + VV F+S I + G L A + M+ + I+P+V TY IL+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C++G++ EA + ++K+G++P++VTY+SL+DG+C + + M + G P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
+V Y +++GL K ++ A+ +M ++I N V FNSLIDG C+ N
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN--------- 510
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
D+A+ + + + GI+PDV T+ +M EGRL+ A + + G
Sbjct: 511 ------RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEP 564
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
Y +I+ CK L L M+ N D +I LF+
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 146/329 (44%), Gaps = 46/329 (13%)
Query: 27 IHNVDDVVSIFN-----------------------------------RLLRMSPTPPIIE 51
++ D+ + +F R+ +M P +
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALA 568
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY--CHQAQITSAFSVLAK 109
+ ++ + K + + L ++ I+ DI N++I+ CH+ + S F
Sbjct: 569 YCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF--FNN 626
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+++ +P+ +T+ T+I G C ++ A + + + F N ++ LI+ LCK
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
++++ + K KP+ V Y ++D K + +F L+ EM I PS+V+++
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
+I G C G++ EA + + + + PDV Y IL+ +CK G++ EA + M++ G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
VKP+ + +L SE N K++++
Sbjct: 807 VKPDDLLQRAL-------SEYNPPKWLMS 828
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
NVL + + + +V + LM+ C V+KA I Q GV S M+N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAI 399
VD + F ++ C+ G+ S + + +LDAL V KA+
Sbjct: 192 IGSDRVDLIADHFDKL-CRG-------------GIEPSGVSAHGFVLDALFCKGEVTKAL 237
Query: 400 ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+ + ++G + + + N ++ GL + +++ A ++ +L G V T+ +ING
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 460 CKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
CK G D A L ME G PD I + T+I F+ G KL + + +G+
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 248/490 (50%), Gaps = 10/490 (2%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD S F +L+ P + ++ L + + A+ L+ + G+ PD VT NI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L + I+ A+ V+ +L KG P+ IT+T L+ G C G + L ++++G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 150 FHLNQI-SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
F LN I +++GLCK G+ +L L +++ + PD+V Y+ +I LCK A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
LY EM RILP+ T +L+ G C G L EA +LLD +++ D+ YNI++D
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K G ++EA + V+++ G+ P+V T+ SL+ GYC + +A+ IL+ + G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 329 VQSYNTMINGLC---KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
V SY T+++ K +DE L EM + I P VT++ + GLC+ +
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRG---WKHEN 591
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ + + +K ++ + +GI PD TYN ++ LC L A ++ + ++
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
+ TY I+I+ LC G +A + + +++ + T+I+A KG+ A K
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 506 LLREMMARGL 515
L +++ RG
Sbjct: 712 LFHQLLHRGF 721
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 191/364 (52%), Gaps = 16/364 (4%)
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
N+ +Y T+++GLC+ + ++ LR E K + P VV +N+I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
++ ++PSV + N LI G C+VG + EA+ L +M + PD TYNIL F
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN-VQS 331
G + A V+ M+ +G+ P+V+TYT L+ G C + ++ +L M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
+ M++GLCK +DEAL+LF +M + P+ V ++ +I GLCK
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG------------- 412
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
D A+ L ++ D+ I P+ RT+ L+ GLC++G L A+ ++ L++ G + +
Sbjct: 413 --KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
Y I+I+G K G +EAL L + + G P TF ++I + +A K+L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 512 ARGL 515
GL
Sbjct: 531 LYGL 534
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 199/376 (52%), Gaps = 32/376 (8%)
Query: 150 FHLNQISYGTLINGLCKMGQTRAS-----LQLLRKIEGKLVKPDV--VMYNTIIDSLCKD 202
+ S+ TL+ GQ R L+ L + EG K + ++++ ++ +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI-NPDVYT 261
+V D+ + +M + S ++NS++Y F +E + D V K I + + +T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWD--VYKEIKDKNEHT 189
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
Y+ +VD C++ K+++A L + + P+VV++ S+M GYC + V+ AK ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ G+ P+V S+N +INGLC + + EAL L ++M+ + P++VT+N L G +I+
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
A +I+ + D+G+ PDV TY IL+ G C+ G + +++D+L
Sbjct: 310 ---------------GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 442 TKGYPV-TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
++G+ + ++ ++M++GLCK G DEAL+L ++M+ +G PD + + +I L + G+
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 501 YKAEKLLREMMARGLL 516
A L EM + +L
Sbjct: 415 DMALWLYDEMCDKRIL 430
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 47/359 (13%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAI-------------------- 69
+D+ +S+FN++ +P ++ + ++ L K+ + A+
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 70 ---------------SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
SL L +G T DIV NI+I+ Y I A + +++ G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ TF +LI G C + A + D + G + +SY TL++ G T++
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE------------MVAMRILP 222
+L R+++ + + P V Y+ I LC+ + ++ E M + I P
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+T+N++I C V L A L+ M ++N++ TYNIL+D+ C G +++A + +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
+ +Q V + YT+L+ +C+ + A + + + RG +++ Y+ +IN LC+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%)
Query: 75 LEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ 134
+E GI PD +T N +I C ++ AF L + + ++ T+ LI LC+ G
Sbjct: 611 MESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGY 670
Query: 135 VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
++ A F + Q L++ +Y TLI C G +++L ++ + + Y+
Sbjct: 671 IRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSA 730
Query: 195 IIDSLCKDTLV 205
+I+ LC+ L+
Sbjct: 731 VINRLCRRHLM 741
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/540 (26%), Positives = 252/540 (46%), Gaps = 55/540 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ D + IF + P + IL S+VK + S ++ I PD+ T NI
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LIN C + + ++ K+ K GY P +T+ T++ C G+ + A++ DH+ ++G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +Y LI+ LC+ + LLR + +++ P+ V YNT+I+ + V A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL---- 265
L +EM++ + P+ VTFN+LI G G KEA+ + M K + P +Y +L
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 266 -------------------------------VDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
+D CK G + EA +L M K G+ P++
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VTY++L++G+C V AK I+ + + G++PN Y+T+I C++ + EA+ ++
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + + TFN L+ LCK+ N ++++ L++ S
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
KA ++ ++ G P TY L+ GLC+ G L+ A++ ++ L V Y
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
++ +CK G +A++L +M +PD+ T+ ++I L KG+ A +E ARG
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 219/419 (52%), Gaps = 20/419 (4%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
N + LI+ G +Q +L+ + GF+ + + ++ + K G+ + L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
+++ + + PDV +N +I+ LC + + L +M P++VT+N++++ +C
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
G+ K AI LLD M +K ++ DV TYN+L+ C+ ++ + +L M K+ + PN VTY
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
+L++G+ +V A +LN M G++PN ++N +I+G EAL +F M+
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 358 KNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDK 397
K + P+ V++ L+DGLCK+ ITY ++D LCK+ +D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A+ L+ ++ GI PD+ TY+ L++G C+ GR K A+E++ + G Y+ +I
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 521
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
C+ G EA+ + M G D TF ++ +L + G+ +AE+ +R M + G+L
Sbjct: 522 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 580
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 233/494 (47%), Gaps = 21/494 (4%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
R+ R+ +P I + ++ + +M AI + + G T D T N+L+ C
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
++ A + + G PNT++F LI G +G+ A D + G H +YG
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYG 622
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
+L+ GLCK G R + + L+ + D VMYNT++ ++CK + A +L+ EMV
Sbjct: 623 SLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR 682
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKE 277
ILP T+ SLI G C G+ AI E + N+ P+ Y VD K G+ K
Sbjct: 683 SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
M G P++VT +++DGY + ++ K +L M + PN+ +YN +++
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII----------------- 380
G K K V + L+ + I+P+ +T +SL+ G+C+SN++
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 381 ---TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
T+N L+ C + ++ A L+K + GI D T + ++ L R + ++ V+
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
++ +G R Y +INGLC+ G A + +M + P + ++RAL +
Sbjct: 923 HEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 982
Query: 498 GENYKAEKLLREMM 511
G+ +A LLR M+
Sbjct: 983 GKADEATLLLRFML 996
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/501 (23%), Positives = 241/501 (48%), Gaps = 21/501 (4%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ N +L +P + F ++ + ++ A+ + + +E G+TP V+ +L++ C
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
A+ A ++ + G IT+T +I GLC NG + A+ + + G + +
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y LING CK+G+ + + +++ +I + P+ ++Y+T+I + C+ + +A +Y M
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ TFN L+ C G++ EA + M + I P+ +++ L++ + G+
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
+A +V M K G P TY SL+ G C + +A+ L S+ + YNT+
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------------ 377
+ +CK + +A++LF EM ++I+P++ T+ SLI GLC+
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719
Query: 378 ---NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
N + Y +D + K+ I +++ + G PD+ T N ++DG G+++
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
+++ ++ + + TY I+++G K + L + NG +PD +T +++ +
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839
Query: 495 FEKGENYKAEKLLREMMARGL 515
E K+L+ + RG+
Sbjct: 840 CESNMLEIGLKILKAFICRGV 860
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/544 (24%), Positives = 243/544 (44%), Gaps = 58/544 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ + + I+ ++ T F ++TSL K + A + GI P+ V+ +
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LIN Y + + AFSV ++ K G+ P T+ +L+KGLC G ++ A +F + A
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
++ + Y TL+ +CK G ++ L ++ + + PD Y ++I LC+ A
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 708
Query: 210 NLYSEMVAM-RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
E A +LP+ V + + G GQ K I ++M PD+ T N ++D
Sbjct: 709 LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG 768
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ + GK+++ ++L M Q PN+ TY L+ GY +V+ + + S+ G+ P+
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPD 828
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY------ 382
+ ++++ G+C+ M++ L + C+ + + TFN LI C + I +
Sbjct: 829 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 888
Query: 383 --------------NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
++++ L ++H ++ ++ ++ QGI P+ R Y L++GLC G
Sbjct: 889 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVG 948
Query: 429 RLKNAQEVIQDLLT------------------------------------KGYPVTVRTY 452
+K A V ++++ K P T+ ++
Sbjct: 949 DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP-TIASF 1007
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
T +++ CK G EAL L M + G D +++ +I L KG+ A +L EM
Sbjct: 1008 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067
Query: 513 RGLL 516
G L
Sbjct: 1068 DGFL 1071
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 121/519 (23%), Positives = 238/519 (45%), Gaps = 52/519 (10%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
S+F+ + ++ P +G +L L K H A L D V N L+
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 663
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL-N 153
C + A S+ +++++ P++ T+T+LI GLC G+ A+ F A+G L N
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIE---------------------GKLVK------ 186
++ Y ++G+ K GQ +A + +++ GK+ K
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 187 --------PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
P++ YN ++ K V+ +F LY ++ ILP +T +SL+ G C
Sbjct: 784 EMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESN 843
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
L+ + +L + + + D YT+N+L+ C G++ A +++ VM G+ + T
Sbjct: 844 MLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD 903
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+++ +++ +L+ M ++G++P + Y +INGLC++ + A + EM
Sbjct: 904 AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
I P V ++++ AL K D+A L++ + + P + ++
Sbjct: 964 KICPPNVAESAMVR---------------ALAKCGKADEATLLLRFMLKMKLVPTIASFT 1008
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
LM C+ G + A E+ + G + + +Y ++I GLC +G A L +M+ +
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 479 GCMPDAITFETIIRALFEKGENYK-AEKLLREMMARGLL 516
G + +A T++ +IR L + + A+ +L++++ARG +
Sbjct: 1069 GFLANATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 176/353 (49%), Gaps = 20/353 (5%)
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
+L + +Y+ +I ++ ++ D+ ++ M PSV T N+++ G+
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
+ L EM+ + I PDV T+NIL++ C EG ++++ ++ M K G P +VTY +++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
YC A +L+ M +GV +V +YN +I+ LC+ + + L +M + I P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 363 NTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALI 402
N VT+N+LI+G N +T+N+L+D + +A+ +
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
+ +G+ P +Y +L+DGLC+ A+ + G V TYT MI+GLCK
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G DEA+ LL++M +G PD +T+ +I + G A++++ + GL
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 1/198 (0%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
H + + + + + +P ++ ++ L ++ TA + ++ I P V
Sbjct: 913 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ ++ + A +L +LK P +FTTL+ C NG V AL+ +
Sbjct: 973 SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS-LCKDTLVT 206
G L+ +SY LI GLC G + +L +++G + Y +I L ++T +
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFS 1092
Query: 207 DAFNLYSEMVAMRILPSV 224
A + +++A + S+
Sbjct: 1093 GADIILKDLLARGFITSM 1110
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/490 (29%), Positives = 248/490 (50%), Gaps = 10/490 (2%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD S F +L+ P + ++ L + + A+ L+ + G+ PD VT NI
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L + I+ A+ V+ +L KG P+ IT+T L+ G C G + L ++++G
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 150 FHLNQI-SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
F LN I +++GLCK G+ +L L +++ + PD+V Y+ +I LCK A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
LY EM RILP+ T +L+ G C G L EA +LLD +++ D+ YNI++D
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K G ++EA + V+++ G+ P+V T+ SL+ GYC + +A+ IL+ + G+ P+
Sbjct: 478 YAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPS 537
Query: 329 VQSYNTMINGLC---KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
V SY T+++ K +DE L EM + I P VT++ + GLC+ +
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDE---LRREMKAEGIPPTNVTYSVIFKGLCRG---WKHEN 591
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ + + +K ++ + +GI PD TYN ++ LC L A ++ + ++
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
+ TY I+I+ LC G +A + + +++ + T+I+A KG+ A K
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 506 LLREMMARGL 515
L +++ RG
Sbjct: 712 LFHQLLHRGF 721
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 191/364 (52%), Gaps = 16/364 (4%)
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
N+ +Y T+++GLC+ + ++ LR E K + P VV +N+I+ CK V A + +
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
++ ++PSV + N LI G C+VG + EA+ L +M + PD TYNIL F
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN-VQS 331
G + A V+ M+ +G+ P+V+TYT L+ G C + ++ +L M RG N +
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
+ M++GLCK +DEAL+LF +M + P+ V ++ +I GLCK
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG------------- 412
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
D A+ L ++ D+ I P+ RT+ L+ GLC++G L A+ ++ L++ G + +
Sbjct: 413 --KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVL 470
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
Y I+I+G K G +EAL L + + G P TF ++I + +A K+L +
Sbjct: 471 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 530
Query: 512 ARGL 515
GL
Sbjct: 531 LYGL 534
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 199/376 (52%), Gaps = 32/376 (8%)
Query: 150 FHLNQISYGTLINGLCKMGQTRAS-----LQLLRKIEGKLVKPDV--VMYNTIIDSLCKD 202
+ S+ TL+ GQ R L+ L + EG K + ++++ ++ +
Sbjct: 78 YAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRL 137
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI-NPDVYT 261
+V D+ + +M + S ++NS++Y F +E + D V K I + + +T
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF------RETDKMWD--VYKEIKDKNEHT 189
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
Y+ +VD C++ K+++A L + + P+VV++ S+M GYC + V+ AK ++
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVL 249
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ G+ P+V S+N +INGLC + + EAL L ++M+ + P++VT+N L G +I+
Sbjct: 250 KCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 309
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
A +I+ + D+G+ PDV TY IL+ G C+ G + +++D+L
Sbjct: 310 ---------------GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 442 TKGYPV-TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
++G+ + ++ ++M++GLCK G DEAL+L ++M+ +G PD + + +I L + G+
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 501 YKAEKLLREMMARGLL 516
A L EM + +L
Sbjct: 415 DMALWLYDEMCDKRIL 430
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 165/364 (45%), Gaps = 47/364 (12%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAI-------------------- 69
+D+ +S+FN++ +P ++ + ++ L K+ + A+
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 70 ---------------SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
SL L +G T DIV NI+I+ Y I A + +++ G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ TF +LI G C + A + D + G + +SY TL++ G T++
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE------------MVAMRILP 222
+L R+++ + + P V Y+ I LC+ + ++ E M + I P
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+T+N++I C V L A L+ M ++N++ TYNIL+D+ C G +++A + +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ +Q V + YT+L+ +C+ + A + + + RG +++ Y+ +IN LC+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 343 KMVD 346
+++
Sbjct: 739 HLMN 742
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 250/483 (51%), Gaps = 22/483 (4%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ SLV++ A + ++ +G+ ++ TLNI++N C ++ + L+++ +KG
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ +T+ TLI G ++ A + + + +GF +Y T+INGLCK G+ +
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
++ ++ + PD Y +++ CK V + ++S+M + ++P +V F+S++ F
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
G L +A+ + + + PD Y IL+ +C++G + A N+ M++QG +V
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VTY +++ G C + +A + N M +R + P+ + +I+G CK+ + A+ LF +
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 355 MDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHH 394
M K I + VT+N+L+DG K I+Y+ L++ALC H
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+ +A + ++ + I+P V N ++ G C G + + ++ ++++G+ +Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 455 MINGLCKEGLFDEALTLLSKMED--NGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
+I G +E +A L+ KME+ G +PD T+ +I+ + + +AE +LR+M+
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Query: 513 RGL 515
RG+
Sbjct: 686 RGV 688
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 228/470 (48%), Gaps = 23/470 (4%)
Query: 61 KMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTI 120
K++ A +L L G T I N LI + A+ V +I + G N
Sbjct: 180 KLREAHEAFTL---LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVY 236
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI 180
T ++ LC +G+++ F V +G + + ++Y TLI+ G + +L+ +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
GK P V YNT+I+ LCK A +++EM+ + P T+ SL+ C G +
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
E + +M ++++ PD+ ++ ++ F + G + +A + + G+ P+ V YT L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ GYC ++ A + N M Q+G +V +YNT+++GLCK KM+ EA LF EM + +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 361 VPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIA 400
P++ T LIDG CK +++TYN+LLD K +D A
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
+ + + I P +Y+IL++ LC +G L A V ++++K TV MI G C
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+ G + + L KM G +PD I++ T+I + KA L+++M
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 236/492 (47%), Gaps = 55/492 (11%)
Query: 61 KMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTI 120
KM+ T +S Q++ G+ PDIVT N LI+ Y + + AF ++ + KG+ P
Sbjct: 250 KMEKVGTFLS---QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMG------------ 168
T+ T+I GLC +G+ + A + ++ G + +Y +L+ CK G
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 169 QTR---------ASLQLLRKIEGKLVK--------------PDVVMYNTIIDSLCKDTLV 205
++R +S+ L G L K PD V+Y +I C+ ++
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMI 426
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+ A NL +EM+ VVT+N++++G C L EA L +EM + + PD YT IL
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+D CK G ++ A + M ++ ++ +VVTY +L+DG+ V +++ AK I M + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P SY+ ++N LC + EA ++ EM KNI P + NS+I G C+S
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG------- 599
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK-- 443
+ + ++K+ +G PD +YN L+ G E + A +++ + +
Sbjct: 600 --------NASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
G V TY +++G C++ EA +L KM + G PD T+ +I + +A
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEA 711
Query: 504 EKLLREMMARGL 515
++ EM+ RG
Sbjct: 712 FRIHDEMLQRGF 723
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 219/456 (48%), Gaps = 17/456 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ + N + +P + + ++ L K Y A + ++ +G++PD T
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ C + + V + + + P+ + F++++ +G + AL + + V G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ + Y LI G C+ G ++ L ++ + DVV YNTI+ LCK ++ +A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L++EM + P T LI G C +G L+ A+ L +M K I DV TYN L+D F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
K G + A + A M+ + + P ++Y+ L++ C + +A + + M + + P V
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
N+MI G C+ + + +M + VP+ +++N+LI G
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG---------------F 630
Query: 390 CKSHHVDKAIALIKKIRDQ--GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ ++ KA L+KK+ ++ G+ PDV TYN ++ G C + ++K A+ V++ ++ +G
Sbjct: 631 VREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNP 690
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
TYT MING + EA + +M G PD
Sbjct: 691 DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 211/418 (50%), Gaps = 20/418 (4%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
N F LI+ +++ A + + ++GF ++ + LI L ++G + +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
++I V +V N ++++LCKD + S++ + P +VT+N+LI +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
G ++EA L++ M K +P VYTYN +++ CK GK + A V A M++ G+ P+ TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
SL+ C +V + + + + M R V P++ +++M++ + +D+AL F +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 358 KNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDK 397
++P+ V + LI G C+ +++TYN++L LCK + +
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A L ++ ++ + PD T IL+DG C+ G L+NA E+ Q + K + V TY +++
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G K G D A + + M +P I++ ++ AL KG +A ++ EM+++ +
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 192/355 (54%), Gaps = 2/355 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V + +F+ + P ++ F +++ + + A+ + ++ G+ PD V
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI YC + I+ A ++ ++L++G + +T+ T++ GLC + A + + + +
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ + LI+G CK+G + +++L +K++ K ++ DVV YNT++D K + A
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++++MV+ ILP+ ++++ L+ C G L EA + DEM++KNI P V N ++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM--PQRGVT 326
+C+ G + + L M+ +G P+ ++Y +L+ G+ ++KA ++ M Q G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
P+V +YN++++G C+ + EA + +M + + P+ T+ +I+G + +T
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ ++D I+ ++ P I + ++ +L H + A + ++ I P ++
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N +I YC + S L K++ +G+ P+ I++ TLI G + A +
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 147 AQ--GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+ G + +Y ++++G C+ Q + + +LRK+ + V PD Y +I+
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Query: 205 VTDAFNLYSEMVAMRILP 222
+T+AF ++ EM+ P
Sbjct: 708 LTEAFRIHDEMLQRGFSP 725
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 327 PNVQ----SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL--CKSNII 380
PN + S + MI+ L + + +A + M ++ V NSL C SN
Sbjct: 107 PNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS 166
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
++ L+ ++ + +A +R +G + N L+ L G ++ A V Q++
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 441 LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
G + V T IM+N LCK+G ++ T LS++++ G PD +T+ T+I A KG
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 501 YKAEKLLREMMARGL 515
+A +L+ M +G
Sbjct: 287 EEAFELMNAMPGKGF 301
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 254/524 (48%), Gaps = 55/524 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V++ V +F+++ P ++ F ++ L Y A ++ G+ P ++T +I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ +I A+ VL ++ KKG+ PN I + LI G + A++ D +V++G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKI--------EGKL----------------- 184
L +Y TLI G CK GQ + +LL+++ +G
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 185 ----------VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+ P + T+I LCK + A L+ + + + T N+L++G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+L EA + E++ + D +YN L+ C + K+ EA L M+K+G+KP+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+ L+ G +++V +A + + G+ P+V +Y+ MI+G CK + +E F E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M KN+ PNTV +N LI C+S N TY SL+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
V++A L +++R +G++P+V Y L+DG + G++ + +++++ +K TYT+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
MI G ++G EA LL++M + G +PD+IT++ I ++G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 235/514 (45%), Gaps = 56/514 (10%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
+LTSLV+ + + + G++PD+ IN +C ++ A + +K+ + G
Sbjct: 232 LLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
PN +TF T+I GL + G+ A F + +V +G I+Y L+ GL + + +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+L+++ K P+V++YN +IDS + + A + MV+ + + T+N+LI G+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 235 CIVGQ-------LKE----------------------------AIALLDEMVTKNINPDV 259
C GQ LKE A+ + EM+ +N++P
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
L+ CK GK +A + + +G + T +L+ G C ++++A I
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL----- 374
+ RG + SYNT+I+G C K +DEA EM + + P+ T++ LI GL
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 375 ----------CKSN-----IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
CK N + TY+ ++D CK+ ++ ++ + +QP+ YN
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L+ C GRL A E+ +D+ KG TYT +I G+ +EA L +M G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
P+ + +I + G+ K E LLREM ++
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ + +++ P + ++ L M AI + G+ PD+ T ++
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+ C + +++ K QPNT+ + LI+ C +G++ AL+ + + +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N +Y +LI G+ + + + L ++ + ++P+V Y +ID K +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L EM + + P+ +T+ +I G+ G + EA LL+EM K I PD TY + +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 270 CKEGKVKEA 278
K+G V EA
Sbjct: 796 LKQGGVLEA 804
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++ V++ + ++ R P + + ++ K + ++ + P+ V
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N LI YC +++ A + + KG PN+ T+T+LIKG+ + +V+ A + +
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G N Y LI+G K+GQ LLR++ K V P+ + Y +I +D VT
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
+A L +EM I+P +T+ IYG+ G + EA DE
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 254/524 (48%), Gaps = 55/524 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V++ V +F+++ P ++ F ++ L Y A ++ G+ P ++T +I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ +I A+ VL ++ KKG+ PN I + LI G + A++ D +V++G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKI--------EGKL----------------- 184
L +Y TLI G CK GQ + +LL+++ +G
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 185 ----------VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+ P + T+I LCK + A L+ + + + T N+L++G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+L EA + E++ + D +YN L+ C + K+ EA L M+K+G+KP+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
TY+ L+ G +++V +A + + G+ P+V +Y+ MI+G CK + +E F E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M KN+ PNTV +N LI C+S N TY SL+ +
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
V++A L +++R +G++P+V Y L+DG + G++ + +++++ +K TYT+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTV 755
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
MI G ++G EA LL++M + G +PD+IT++ I ++G
Sbjct: 756 MIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 235/514 (45%), Gaps = 56/514 (10%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
+LTSLV+ + + + G++PD+ IN +C ++ A + +K+ + G
Sbjct: 232 LLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
PN +TF T+I GL + G+ A F + +V +G I+Y L+ GL + + +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+L+++ K P+V++YN +IDS + + A + MV+ + + T+N+LI G+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 235 CIVGQ-------LKE----------------------------AIALLDEMVTKNINPDV 259
C GQ LKE A+ + EM+ +N++P
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG 470
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
L+ CK GK +A + + +G + T +L+ G C ++++A I
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL----- 374
+ RG + SYNT+I+G C K +DEA EM + + P+ T++ LI GL
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 375 ----------CKSN-----IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
CK N + TY+ ++D CK+ ++ ++ + +QP+ YN
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L+ C GRL A E+ +D+ KG TYT +I G+ +EA L +M G
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
P+ + +I + G+ K E LLREM ++
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ + +++ P + ++ L M AI + G+ PD+ T ++
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+ C + +++ K QPNT+ + LI+ C +G++ AL+ + + +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N +Y +LI G+ + + + L ++ + ++P+V Y +ID K +
Sbjct: 676 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L EM + + P+ +T+ +I G+ G + EA LL+EM K I PD TY + +
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
Query: 270 CKEGKVKEA 278
K+G V EA
Sbjct: 796 LKQGGVLEA 804
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++ V++ + ++ R P + + ++ K + ++ + P+ V
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N LI YC +++ A + + KG PN+ T+T+LIKG+ + +V+ A + +
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G N Y LI+G K+GQ LLR++ K V P+ + Y +I +D VT
Sbjct: 708 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 767
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
+A L +EM I+P +T+ IYG+ G + EA DE
Sbjct: 768 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 244/476 (51%), Gaps = 9/476 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC-HQAQITSAFS 105
P + + K+++ L + + A+ +++ T P++VT + L+ C C ++ Q+
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR 358
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
VL ++ +G P+ F +L+ C +G A + +V G + Y LI +C
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 166 --KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS----LCKDTLVTDAFNLYSEMVAMR 219
K L L K +++ VV+ + S LC AF++ EM+
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
+P T++ ++ C +++ A L +EM + DVYTY I+VD+FCK G +++A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
M + G PNVVTYT+L+ Y +V+ A + +M G PN+ +Y+ +I+G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNT-VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
CK V++A +F M VP+ + F D + N++TY +LLD CKSH V++A
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
L+ + +G +P+ Y+ L+DGLC+ G+L AQEV ++ G+P T+ TY+ +I+
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
K D A +LSKM +N C P+ + + +I L + G+ +A KL++ M +G
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 242/522 (46%), Gaps = 42/522 (8%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ + NR+ S P ++ + +L + K + + + G P N L
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ------VQTALQFHDH 144
++ YC + A+ +L K++K G+ P + + LI +C + + A + +
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
++A G LN+I+ + LC G+ + ++R++ G+ PD Y+ +++ LC +
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ AF L+ EM ++ V T+ ++ FC G +++A +EM P+V TY
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM---- 320
L+ A+ K KV A + M+ +G PN+VTY++L+DG+C +V KA I M
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 321 ------------PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
PNV +Y +++G CK V+EA L M + PN + ++
Sbjct: 619 DVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 369 SLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+LIDGLCK + + TY+SL+D K D A ++ K+ +
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
P+V Y ++DGLC+ G+ A +++Q + KG V TYT MI+G G +
Sbjct: 739 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETC 798
Query: 469 LTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
L LL +M G P+ +T+ +I + G A LL EM
Sbjct: 799 LELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 135/515 (26%), Positives = 241/515 (46%), Gaps = 40/515 (7%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
+ S+ ++ P + K+L L A L +++ G+ D+ T I+
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
++ +C I A ++ + G PN +T+T LI +V A + + ++++G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGK----------------LVKPDVVMYNT 194
N ++Y LI+G CK GQ + Q+ ++ G +P+VV Y
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGA 644
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
++D CK V +A L M P+ + +++LI G C VG+L EA + EM
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+YTY+ L+D + K + A+ VL+ M++ PNVV YT ++DG C V + ++A
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
++ M ++G PNV +Y MI+G I ++ L L M K + PN VT+ LID
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 375 CKSNII-TYNSLLDALCKSHHVD-----------------KAIALIKKIRDQGIQPDVRT 416
CK+ + ++LL+ + ++H +++ L+ +I P +
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV----RTYTIMINGLCKEGLFDEALTLL 472
Y +L+D L + RL+ A +++++ T + T+ TY +I LC + A L
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANKVETAFQLF 942
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
S+M G +P+ +F ++I+ LF + +A LL
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 189/421 (44%), Gaps = 40/421 (9%)
Query: 132 NGQVQTALQFHDHVVAQGFHLNQIS------YGTLINGL----CKMGQTRASLQLLRKIE 181
N V ++ D V + F L QI +G +N L C+ G +L+ L +++
Sbjct: 169 NALVDLIVRDDDEKVPEEF-LQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 182 GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLK 241
+P YN +I + K + A ++ EM + T Y C VG+ +
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
EA+ L++ T+N PD Y L+ C+ +EA + L M PNVVTY++L+
Sbjct: 288 EALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
G ++ + K +LN M G P+ + +N++++ C A L +M +
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 362 PNTVTFNSLIDGLCKS--------------------------NIITYNSLLDALCKSHHV 395
P V +N LI +C N I +S LC +
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+KA ++I+++ QG PD TY+ +++ LC +++ A + +++ G V TYTIM
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++ CK GL ++A ++M + GC P+ +T+ +I A + + A +L M++ G
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 516 L 516
L
Sbjct: 585 L 585
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 152/324 (46%), Gaps = 4/324 (1%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
H V++ + + + P I + ++ L K+ A + ++ G + T
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ LI+ Y + A VL+K+L+ PN + +T +I GLC G+ A + +
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G N ++Y +I+G +G+ L+LL ++ K V P+ V Y +ID CK+ +
Sbjct: 773 KGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDV 832
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A NL EM + +I GF + E++ LLDE+ + P + Y +L+D
Sbjct: 833 AHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 268 AFCKEGKVKEATNVL--AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
K +++ A +L + TY SL++ CL ++V A + + M ++GV
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 326 TPNVQSYNTMINGLCKIKMVDEAL 349
P +QS+ ++I GL + + EAL
Sbjct: 951 IPEMQSFCSLIKGLFRNSKISEAL 974
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 37/249 (14%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ +++L S P ++ + +++ L K+ A L +E G P++VT +I+ +
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA---------LQFHDHV- 145
+I + +L ++ KG PN +T+ LI C NG + A + H
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 146 ----VAQGFH---------LNQIS----------YGTLINGLCKMGQTRASLQLLRKI-- 180
V +GF+ L++I Y LI+ L K + +L+LL ++
Sbjct: 851 GYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT 910
Query: 181 -EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
LV YN++I+SLC V AF L+SEM ++P + +F SLI G +
Sbjct: 911 FSATLVDYSST-YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSK 969
Query: 240 LKEAIALLD 248
+ EA+ LLD
Sbjct: 970 ISEALLLLD 978
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 241/482 (50%), Gaps = 56/482 (11%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
+L + ++ + A+ + ++ G+TP +T+N ++ I A +V ++ +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P++ ++ ++ G +G++Q A ++ ++ +GF
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGF------------------------ 248
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
PD I+ +LC++ LV A + +M+ + P+++ F SLI G
Sbjct: 249 -----------IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV-KPN 293
C G +K+A +L+EMV P+VYT+ L+D CK G ++A + +++ KPN
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
V TYTS++ GYC ++N+A+ + + M ++G+ PNV +Y T+ING CK A L
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417
Query: 354 EMDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSH 393
M + +PN T+N+ ID LCK ++ +TY L+ CK +
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQN 477
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+++A+A ++ G + D+R NIL+ C + ++K ++ + Q +++ G T TYT
Sbjct: 478 DINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
MI+ CKEG D AL M+ +GC+PD+ T+ ++I L +K +A KL M+ R
Sbjct: 538 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Query: 514 GL 515
GL
Sbjct: 598 GL 599
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 214/458 (46%), Gaps = 25/458 (5%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G PD T +++ C + A K++ G++PN I FT+LI GLC G ++ A
Sbjct: 247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQA 306
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQL-LRKIEGKLVKPDVVMYNTIID 197
+ + +V G+ N ++ LI+GLCK G T + +L L+ + KP+V Y ++I
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
CK+ + A L+S M + P+V T+ +LI G C G A L++ M + P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
++YTYN +D+ CK+ + EA +L G++ + VTYT L+ C +++N+A
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
M + G +++ N +I C+ K + E+ LF + ++P T+ S+I CK
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 546
Query: 378 NII--------------------TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
I TY SL+ LCK VD+A L + + D+G+ P T
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606
Query: 418 NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
L C+ NA +++ L K + TVRT ++ LC E A K+ +
Sbjct: 607 VTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT---LVRKLCSEKKVGVAALFFQKLLE 663
Query: 478 NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D +T A E G+N L E ++RG+
Sbjct: 664 KDSSADRVTLAAFTTACSESGKNNLVTDLT-ERISRGV 700
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 229/486 (47%), Gaps = 18/486 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I +++ V + + TP I +L V++ A ++ ++ G+ PD +
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 87 LNIL-INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
++ I C+ +I A L ++++G+ P+ T T ++ LC NG V A+ + +
Sbjct: 220 YKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKM 278
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ GF N I++ +LI+GLCK G + + ++L ++ KP+V + +ID LCK
Sbjct: 279 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWT 338
Query: 206 TDAFNLYSEMVAMRIL-PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
AF L+ ++V P+V T+ S+I G+C +L A L M + + P+V TY
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
L++ CK G A ++ +M +G PN+ TY + +D C S +A +LN G
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
+ + +Y +I CK +++AL F M N F ++++ N
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRM-------NKTGF--------EADMRLNNI 503
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
L+ A C+ + ++ L + + G+ P TY ++ C+EG + A + ++ G
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
TY +I+GLCK+ + DEA L M D G P +T T+ ++ ++ A
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 505 KLLREM 510
LL +
Sbjct: 624 ILLEPL 629
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 18/418 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+ + F +++ + P +I F ++ L K A + ++ G P++ T
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 90 LINCYCHQAQITSAFSVLAKILKKG-YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ C + AF + K+++ Y+PN T+T++I G C ++ A + Q
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N +Y TLING CK G + +L+ + + P++ YN IDSLCK + +A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ L ++ + + VT+ LI C + +A+A M D+ NIL+ A
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC++ K+KE+ + +++ G+ P TYTS++ YC +++ A ++M + G P+
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN---------- 378
+Y ++I+GLCK MVDEA L+ M + + P VT +L CK N
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 379 -------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
I T +L+ LC V A +K+ ++ D T E G+
Sbjct: 628 PLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 184/378 (48%), Gaps = 21/378 (5%)
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
++ ++G+ ++ ++ ++ + + P + N +++ + L+ A N++ EM
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
++P ++ ++ G G+++EA L M+ + PD T +++ A C+ G V A
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
M+ G KPN++ +TSL+DG C + +A +L M + G PNV ++ +I+GL
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 340 CKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGLCKS--------------------N 378
CK ++A LF ++ PN T+ S+I G CK N
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+ TY +L++ CK+ +A L+ + D+G P++ TYN +D LC++ R A E++
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
+ G TYTI+I CK+ ++AL +M G D +I A +
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 499 ENYKAEKLLREMMARGLL 516
+ ++E+L + +++ GL+
Sbjct: 513 KMKESERLFQLVVSLGLI 530
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 247/511 (48%), Gaps = 29/511 (5%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ V +F R+ P + + +L +L+ + ++ G P++ T N+
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ C ++ A +L ++ KG P+ +++TT+I +C G V+ + +A+
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAER 241
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F Y LINGLCK + + +L+R++ K + P+V+ Y+T+I+ LC + AF
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDA 268
+ ++M+ P++ T +SL+ G + G +A+ L ++M+ + P+V YN LV
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC G + +A +V + M + G PN+ TY SL++G+ ++ A YI N M G PN
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------- 377
V Y M+ LC+ EA +L M +N P+ TFN+ I GLC +
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 378 ----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
NI+TYN LLD L K++ +++A L ++I +G++ TYN L+ G C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME--DNGCMPDAI 485
G A +++ ++ G T ++I CK+G + A +L + PD I
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGLL 516
++ +I L LL M++ G++
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIV 632
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 224/435 (51%), Gaps = 29/435 (6%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +++S+ ++ L+ + E P + N LIN C + AF +
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFEL 268
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ ++++KG PN I+++TLI LC +GQ++ A F ++ +G H N + +L+ G
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 167 MGQTRASLQLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
G T +L L + I G ++P+VV YNT++ C + A +++S M + P++
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+ SLI GF G L A+ + ++M+T P+V Y +V+A C+ K KEA +++ +M
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG-VTPNVQSYNTMINGLCKIKM 344
K+ P+V T+ + + G C ++ A+ + M Q+ PN+ +YN +++GL K
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR 508
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI--------------------ITYNS 384
++EA L E+ + + ++ T+N+L+ G C + + IT N
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 385 LLDALCKSHHVDKAIALIKKIR--DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
++ A CK ++A ++ + + +PDV +Y ++ GLC ++ +++ +++
Sbjct: 569 IILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMIS 628
Query: 443 KGYPVTVRTYTIMIN 457
G ++ T++++IN
Sbjct: 629 AGIVPSIATWSVLIN 643
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 224/475 (47%), Gaps = 62/475 (13%)
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+ Y A + +I + G P+ + ++ L ++Q + + G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F N +Y L+ LCK + + +LL ++ K PD V Y T+I S+C+ LV +
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L A R P V +N+LI G C K A L+ EMV K I+P+V +Y+ L++
Sbjct: 237 EL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 270 CKEGKVKEATNVLAVMMKQ------------------------------------GVKPN 293
C G+++ A + L M+K+ G++PN
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
VV Y +L+ G+C + KA + + M + G +PN+++Y ++ING K +D A+ ++
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 354 EMDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSH 393
+M PN V + ++++ LC+ ++ T+N+ + LC +
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAG 471
Query: 394 HVDKAIALIKKIRDQG-IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+D A + +++ Q P++ TYN L+DGL + R++ A + +++ +G + TY
Sbjct: 472 RLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTY 531
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
+++G C GL AL L+ KM +G PD IT II A ++G+ +A ++L
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 26/417 (6%)
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
++ +TF +I+ L ++GQV + + QGFH ++ + ++I+ ++G ++
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
++ +I+ P V +YN ++D+L + + + +Y +M P+V T+N L+
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C ++ A LL EM K PD +Y ++ + C+ G VKE + + +P V
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVV 246
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
Y +L++G C + A ++ M ++G++PNV SY+T+IN LC ++ A + +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 355 MDCKNIVPNTVTFNSLIDGL---------------------CKSNIITYNSLLDALCKSH 393
M + PN T +SL+ G + N++ YN+L+ C
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
++ KA+++ + + G P++RTY L++G + G L A + +LT G V YT
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
M+ LC+ F EA +L+ M C P TF I+ L + G AEK+ R+M
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 182/408 (44%), Gaps = 74/408 (18%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++ L K Y A L ++ GI+P++++ + LIN C+ QI AFS
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV---------------AQGF- 150
L ++LK+G PN T ++L+KG L G AL + ++ QGF
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFC 363
Query: 151 -------------HLNQI-------SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVV 190
H+ +I +YG+LING K G ++ + K+ P+VV
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+Y ++++LC+ + +A +L M PSV TFN+ I G C G+L A + +M
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 251 VTKN-INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG------ 303
++ P++ TYN L+D K +++EA + + +GV+ + TY +L+ G
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 304 -----------------------------YCLVSEVNKAKYILN--SMPQRGVTPNVQSY 332
YC + +A +L+ S +R P+V SY
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
+I GLC+ ++ + L M IVP+ T++ LI+ +I+
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIV 651
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 171/398 (42%), Gaps = 63/398 (15%)
Query: 173 SLQLLRKI-EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+L + I L K + + +I L D V L +M S F S+I
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ VG + A+ + + +P V YN ++D E +++ V M + G +
Sbjct: 119 SVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE 178
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNV TY L+ C ++V+ AK +L M +G P+ SY T+I+ +C++ +V E L
Sbjct: 179 PNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL 238
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCK 391
+ P +N+LI+GLCK N+I+Y++L++ LC
Sbjct: 239 AERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCN 293
Query: 392 SHHVDKAIALIKK------------------------------------IRDQGIQPDVR 415
S ++ A + + + IR G+QP+V
Sbjct: 294 SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV 353
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
YN L+ G C G + A V + G +RTY +ING K G D A+ + +KM
Sbjct: 354 AYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+GC P+ + + ++ AL + +AE L+ E+M++
Sbjct: 414 LTSGCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSK 450
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 118/246 (47%), Gaps = 7/246 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D V I+N++L P ++ + ++ +L + + A SL + P + T N
Sbjct: 402 SLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGY-QPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
I C ++ A V ++ ++ PN +T+ L+ GL +++ A +
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRK--IEGKLVKPDVVMYNTIIDSLCKDTLV 205
+G + +Y TL++G C G +LQL+ K ++GK PD + N II + CK
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK--SPDEITMNMIILAYCKQGKA 579
Query: 206 TDAFNLYSEMVAMR--ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
A + + R P V+++ ++I+G C ++ + LL+ M++ I P + T++
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 264 ILVDAF 269
+L++ F
Sbjct: 640 VLINCF 645
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 240/513 (46%), Gaps = 37/513 (7%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D +F + + P +I + ++ K L Q G+ D+V +
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSS 361
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
I+ Y + +A V ++L +G PN +T+T LIKGLC +G++ A + ++ +G
Sbjct: 362 TIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRG 421
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y +LI+G CK G R+ L + PDVV+Y ++D L K L+ A
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY------N 263
+M+ I +VV FNSLI G+C + + EA+ + M I PDV T+ +
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
I+ DAFCK K + +M + + ++ ++ + A N++ +
Sbjct: 542 IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 601
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------ 377
+ P++ +YNTMI G C ++ +DEA +F + PNTVT LI LCK+
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 378 --------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
N +TY L+D KS ++ + L ++++++GI P + +Y+I++DG
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
LC+ GR+ A + + V Y I+I G CK G EA L M NG PD
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ + RAL E Y K L M++G+
Sbjct: 782 ----DLLQRALSE----YNPPKWL---MSKGVW 803
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 238/498 (47%), Gaps = 61/498 (12%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G P++VT LIN +C + ++ AF + + ++G +P+ I ++TLI G G +
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ + +G L+ + + + I+ K G + + +++ + + P+VV Y +I
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
LC+D + +AF +Y +++ + PS+VT++SLI GFC G L+ AL ++M+ PD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V Y +LVD K+G + A M+ Q ++ NVV + SL+DG+C ++ ++A +
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 319 SMPQRGVTPNVQSYNT------MINGLCKIKMVDEALNLFAEMD---------------- 356
M G+ P+V ++ T M + CK L LF M
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 580
Query: 357 ----CKNIVPNTVTFNSLIDGLCKSNIITYNS---------------------------- 384
C I + FN+LI+G + +I+TYN+
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 385 -------LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
L+ LCK++ +D AI + + ++G +P+ TY LMD + ++ + ++
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
+++ KG ++ +Y+I+I+GLCK G DEA + + D +PD + + +IR +
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 498 GENYKAEKLLREMMARGL 515
G +A L M+ G+
Sbjct: 761 GRLVEAALLYEHMLRNGV 778
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 256/549 (46%), Gaps = 65/549 (11%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN- 88
VD + IF ++ P ++L SL+ +L GI P V+ +
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 89 -ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+L +C + ++T A ++++G++ ++ ++KGL ++ Q++ A + V+
Sbjct: 222 FVLDALFC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLD 279
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G N +++ TLING CK G+ + L + +E + ++PD++ Y+T+ID K ++
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+S+ + + VV F+S I + G L A + M+ + I+P+V TY IL+
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C++G++ EA + ++K+G++P++VTY+SL+DG+C + + M + G P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------------ 375
+V Y +++GL K ++ A+ +M ++I N V FNSLIDG C
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 376 --------KSNIITYNSLL------DALCKS----------------------------- 392
K ++ T+ +++ DA CK
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 579
Query: 393 ------HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
H ++ A + + ++PD+ TYN ++ G C RL A+ + + L +
Sbjct: 580 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 639
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
T TI+I+ LCK D A+ + S M + G P+A+T+ ++ + + + KL
Sbjct: 640 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 699
Query: 507 LREMMARGL 515
EM +G+
Sbjct: 700 FEEMQEKGI 708
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 169/358 (47%), Gaps = 29/358 (8%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ +++ +++M P ++ +G ++ L K A+ S ++ I ++V N
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ +C + A V + G +P+ TFTT+++
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR--------------------- 539
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ + CK + LQL ++ + D+ + N +I L K + DA
Sbjct: 540 --------VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ ++ ++ P +VT+N++I G+C + +L EA + + + P+ T IL+
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 651
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK + A + ++M ++G KPN VTY LMD + ++ + + M ++G++P+
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 711
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
+ SY+ +I+GLCK VDEA N+F + ++P+ V + LI G CK + +LL
Sbjct: 712 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
H ++D FN L+ P I+ + ++ ++ A + L+ T P+ VTL
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
ILI+ C + A + + + +KG +PN +T+ L+ + ++ + + + +
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G + +SY +I+GLCK G+ + + + I+ KL+ PDVV Y +I CK +
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL-PDVVAYAILIRGYCKVGRLV 764
Query: 207 DAFNLYSEMVAMRILP 222
+A LY M+ + P
Sbjct: 765 EAALLYEHMLRNGVKP 780
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 17/236 (7%)
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
NVL + + + +V + LM+ C V+KA I Q GV S M+N L
Sbjct: 134 NVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSL 191
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAI 399
VD + F ++ C+ G+ S + + +LDAL V KA+
Sbjct: 192 IGSDRVDLIADHFDKL-CRG-------------GIEPSGVSAHGFVLDALFCKGEVTKAL 237
Query: 400 ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+ + ++G + + + N ++ GL + +++ A ++ +L G V T+ +ING
Sbjct: 238 DFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGF 296
Query: 460 CKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
CK G D A L ME G PD I + T+I F+ G KL + + +G+
Sbjct: 297 CKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 2/163 (1%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPP-IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIV 85
+ +D+ IF LL+++P P + ++ L K AI + + G P+ V
Sbjct: 620 LRRLDEAERIFE-LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
T L++ + I +F + ++ +KG P+ ++++ +I GLC G+V A
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPD 188
+ + ++Y LI G CK+G+ + L + VKPD
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 238/463 (51%), Gaps = 17/463 (3%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFT-GITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
IL LV+ + + + + + +QL + G+ PD+ +L C Q + +L ++
Sbjct: 170 ILNGLVRRRRFDS-VWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G +PN +T I LC + +++ A + + + G N +Y +I+G CK G R +
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
L ++I + P+VV++ T++D CK + A +L+ MV + P++ +N LI+G
Sbjct: 289 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG 348
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
C G + EA+ LL EM + N++PDV+TY IL++ C E +V EA + M + + P+
Sbjct: 349 HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
TY SL+ GYC + +A + + M GV PN+ +++T+I+G C ++ + A+ L+
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYF 468
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
EM K IVP +++TY +L+DA K ++ +A+ L + + GI P+
Sbjct: 469 EMTIKGIVP---------------DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
T+ L+DG +EGRL A + Q+ + +T +I GLC+ G A S
Sbjct: 514 DHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFS 573
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
M G PD ++ ++++ ++ L +M+ G+L
Sbjct: 574 DMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 20/434 (4%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D V + ++ P + + + K YS L ++ GI P++ I
Sbjct: 181 DSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIY 240
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I C ++ A + + K G PN T++ +I G C G V+ A + ++
Sbjct: 241 ILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAEL 300
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N + +GTL++G CK + + L + V P++ +YN +I CK + +A
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
L SEM ++ + P V T+ LI G CI Q+ EA L +M + I P TYN L+ +C
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
KE +++A ++ + M GV+PN++T+++L+DGYC V ++ A + M +G+ P+V
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------- 377
+Y +I+ K + EAL L+++M I PN TF L+DG K
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 378 -------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
N + + L++ LC++ ++ +A +R GI PD+ +Y ++ G +E R+
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 431 KNAQEVIQDLLTKG 444
+ + D++ G
Sbjct: 601 TDTMMLQCDMIKTG 614
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 204/419 (48%), Gaps = 20/419 (4%)
Query: 117 PNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQL 176
P++ +++ GL + + + ++++G + Y L K G +L
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 177 LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCI 236
L ++ +KP+V +Y I LC+D + +A ++ M +LP++ T++++I G+C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
G +++A L E++ + P+V + LVD FCK ++ A ++ M+K GV PN+
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y L+ G+C + +A +L+ M ++P+V +Y +INGLC V EA LF +M
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 357 CKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVD 396
+ I P++ T+NSLI G CK NIIT+++L+D C +
Sbjct: 402 NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
A+ L ++ +GI PDV TY L+D +E +K A + D+L G T+ ++
Sbjct: 462 AAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+G KEG A+ + + + F +I L + G +A + +M + G+
Sbjct: 522 DGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGI 580
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 174/352 (49%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ +F + + P + + ++ K + A L ++ + P++V
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ +C ++ +A S+ ++K G PN + LI G C +G + A+ + +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +Y LINGLC Q + +L +K++ + + P YN++I CK+ + A
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L SEM A + P+++TF++LI G+C V +K A+ L EM K I PDV TY L+DA
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
KE +KEA + + M++ G+ PN T+ L+DG+ ++ A Q+ N
Sbjct: 490 FKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNH 549
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ +I GLC+ + A F++M I P+ ++ S++ G + IT
Sbjct: 550 VGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRIT 601
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 176/351 (50%), Gaps = 3/351 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTL 87
NV ++ +L P ++ FG ++ K + TA SL H ++F G+ P++
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKF-GVDPNLYVY 342
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N LI+ +C + A +L+++ P+ T+T LI GLC+ QV A + +
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ + +Y +LI+G CK +L L ++ V+P+++ ++T+ID C +
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A LY EM I+P VVT+ +LI +KEA+ L +M+ I+P+ +T+ LVD
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
F KEG++ A + +Q N V +T L++G C + +A + M G+TP
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
++ SY +M+ G + K + + + L +M I+PN + N L+ ++N
Sbjct: 583 DICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQAN 632
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+N++ + + + + P II F ++ ++ A+ L ++ GI PD+VT
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
LI+ + +A + A + + +L+ G PN TF L+ G G++ A+ F+
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ 542
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
Q N + + LI GLC+ G + + + + PD+ Y +++ ++ +TD
Sbjct: 543 QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITD 602
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
L +M+ ILP+++ L + G +K A L + K ++
Sbjct: 603 TMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTVS 651
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
++ +I ++ + +EAL + EM C P++ S+++GL + ++S+
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRR--RFDSVW----- 184
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
VD + + +G+ PDV Y +L ++G ++++ ++ + G V
Sbjct: 185 ---VDYQLMI-----SRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI 236
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
YTI I LC++ +EA + M+ +G +P+ T+ +I + G +A L +E++
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 512 ARGLL 516
LL
Sbjct: 297 VAELL 301
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 238/460 (51%), Gaps = 16/460 (3%)
Query: 34 VSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINC 93
+S FN ++ P F +LT +V ++ S ++ + + + D+ + ILI
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK-SKVVLDVYSFGILIKG 172
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
C +I +F +L ++ + G+ PN + +TTLI G C G+++ A + G N
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
+ +Y LINGL K G + ++ K++ V P++ YN +++ LCKD DAF ++
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
EM + ++VT+N+LI G C +L EA ++D+M + INP++ TYN L+D FC G
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K+ +A ++ + +G+ P++VTY L+ G+C + + A ++ M +RG+ P+ +Y
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
+I+ + +++A+ L M+ +VP+ T++ LI G C
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG--------------- 457
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+++A L K + ++ +P+ YN ++ G C+EG A ++++++ K V +Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
MI LCKE EA L+ KM D+G P I RA
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 245/473 (51%), Gaps = 22/473 (4%)
Query: 64 HYSTAISLSHQLEFTGITPDIVTL-NILINCYCHQAQITSAFSVLAKILKKGYQPNTITF 122
+ T+ SL H L + + L ++IN Y + + S +++ G+ P + F
Sbjct: 73 QFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCF 132
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
L+ + + F + ++ L+ S+G LI G C+ G+ S LL ++
Sbjct: 133 NYLLTFVVGSSSFNQWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE 191
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
P+VV+Y T+ID CK + A +L+ EM + ++ + T+ LI G G K+
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQ 251
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
+ ++M + P++YTYN +++ CK+G+ K+A V M ++GV N+VTY +L+
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
G C ++N+A +++ M G+ PN+ +YNT+I+G C + + +AL+L ++ + + P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 363 NTVTFNSLIDGLC--------------------KSNIITYNSLLDALCKSHHVDKAIALI 402
+ VT+N L+ G C K + +TY L+D +S +++KAI L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
+ + G+ PDV TY++L+ G C +G++ A + + ++ K Y MI G CKE
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G AL LL +ME+ P+ ++ +I L ++ ++ +AE+L+ +M+ G+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 188/357 (52%), Gaps = 23/357 (6%)
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
E + K +Y II+S + + + + ++EMV +P FN L+
Sbjct: 86 ESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSF 145
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+ + +E +K + DVY++ IL+ C+ G+++++ ++L + + G PNVV YT+L
Sbjct: 146 NQWWSFFNENKSKVV-LDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTL 204
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+DG C E+ KAK + M + G+ N ++Y +INGL K + + ++ +M +
Sbjct: 205 IDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGV 264
Query: 361 VPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIA 400
PN T+N +++ LCK NI+TYN+L+ LC+ +++A
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANK 324
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
++ +++ GI P++ TYN L+DG C G+L A + +DL ++G ++ TY I+++G C
Sbjct: 325 VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFC 384
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY-KAEKLLREMMARGLL 516
++G A ++ +ME+ G P +T+ TI+ F + +N KA +L M GL+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTY-TILIDTFARSDNMEKAIQLRLSMEELGLV 440
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 129/262 (49%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D +F+ + + I+ + ++ L + + A + Q++ GI P+++T N LI
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ +C ++ A S+ + +G P+ +T+ L+ G C G A + + +G
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
++++Y LI+ + ++QL +E + PDV Y+ +I C + +A L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+ MV P+ V +N++I G+C G A+ LL EM K + P+V +Y +++ CK
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 272 EGKVKEATNVLAVMMKQGVKPN 293
E K KEA ++ M+ G+ P+
Sbjct: 526 ERKSKEAERLVEKMIDSGIDPS 547
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 244/485 (50%), Gaps = 23/485 (4%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+G ++ + A ++ ++ +G P++V LI + ++ A VL ++
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G P+ + +LI GL ++ A F +V G N +YG I+G + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + ++++ V P+ V+ +I+ CK V +A + Y MV IL T+ L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G ++ +A + EM K I PDV++Y +L++ F K G +++A+++ M+++G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNV+ Y L+ G+C E+ KAK +L+ M +G+ PN +Y T+I+G CK + EA L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCK-------------------SNIITYNSLLDALCKS 392
F EM K +VP++ + +L+DG C+ S+ +N+L++ + K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKF 779
Query: 393 HHVDKAIALIKKIRDQGI----QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
+ ++ ++ D +P+ TYNI++D LC+EG L+ A+E+ + T
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
V TYT ++NG K G E + + G PD I + II A ++G KA L+
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVD 899
Query: 509 EMMAR 513
+M A+
Sbjct: 900 QMFAK 904
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 251/512 (49%), Gaps = 30/512 (5%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D +I ++ P ++ + ++ + ++ + A+ + +++ GI PDI N
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI ++ A S L ++++ G +PN T+ I G + +A ++ +
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N++ LIN CK G+ + R + + + D Y +++ L K+ V DA
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ EM I P V ++ LI GF +G +++A ++ DEMV + + P+V YN+L+
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC+ G++++A +L M +G+ PN VTY +++DGYC ++ +A + + M +G+ P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI----------------- 371
Y T+++G C++ V+ A+ +F + K +T FN+LI
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLN 790
Query: 372 -------DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
D K N +TYN ++D LCK +++ A L ++++ + P V TY L++G
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM-----EDNG 479
+ GR V + + G Y+++IN KEG+ +AL L+ +M D+G
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMM 511
C T ++ + GE AEK++ M+
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 235/488 (48%), Gaps = 15/488 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NVD + + ++ P + ++ L K+K A SL +++ G++ D T +
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+LI+ +A ++ +++ G + I + G ++ A D ++A
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G +Y +LI G C+ R +LL +++ + + Y T++ +C + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+N+ EM+A P+VV + +LI F + +A+ +L EM + I PD++ YN L+
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
K ++ EA + L M++ G+KPN TY + + GY SE A + M + GV PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+IN CK V EA + + S++D + TY L++
Sbjct: 557 KVLCTGLINEYCKKGKVIEACS---------------AYRSMVDQGILGDAKTYTVLMNG 601
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
L K+ VD A + +++R +GI PDV +Y +L++G + G ++ A + +++ +G
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
V Y +++ G C+ G ++A LL +M G P+A+T+ TII + G+ +A +L
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 509 EMMARGLL 516
EM +GL+
Sbjct: 722 EMKLKGLV 729
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 213/437 (48%), Gaps = 15/437 (3%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ L+K ++ A L H++ GI + I + + A ++ ++ G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P + +LI+G C V+ + + + ++ +YGT++ G+C G +
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+++++ +P+VV+Y T+I + +++ DA + EM I P + +NSLI G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
++ EA + L EMV + P+ +TY + + + + A + M + GV PN
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
V T L++ YC +V +A SM +G+ + ++Y ++NGL K VD+A +F E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M K I P+ ++ LI+G K ++ KA ++ ++ ++G+ P+V
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLG---------------NMQKASSIFDEMVEEGLTPNV 662
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
YN+L+ G C G ++ A+E++ ++ KG TY +I+G CK G EA L +
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 475 MEDNGCMPDAITFETII 491
M+ G +PD+ + T++
Sbjct: 723 MKLKGLVPDSFVYTTLV 739
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 232/497 (46%), Gaps = 60/497 (12%)
Query: 78 TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
+G+ P LI YC + + + +L ++ K+ + T+ T++KG+C +G +
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
A ++A G N + Y TLI + + ++++L++++ + + PD+ YN++I
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
L K + +A + EMV + P+ T+ + I G+ + A + EM + P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLP 555
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ L++ +CK+GKV EA + M+ QG+ + TYT LM+G +V+ A+ I
Sbjct: 556 NKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
M +G+ P+V SY +ING K+ + +A ++F EM + + PN + +N L+ G C+S
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 378 --------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
N +TY +++D CKS + +A L +++ +G+ PD Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 418 NILMDGLC----------------------------------EEGRLKNAQEVIQDLLTK 443
L+DG C + G+ + EV+ L+
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795
Query: 444 -----GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
G P V TY IMI+ LCKEG + A L +M++ MP IT+ +++ + G
Sbjct: 796 SFDRFGKPNDV-TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMG 854
Query: 499 ENYKAEKLLREMMARGL 515
+ + E +A G+
Sbjct: 855 RRAEMFPVFDEAIAAGI 871
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 178/375 (47%), Gaps = 15/375 (4%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ L K A + ++ GI PD+ + +LIN + + A S+ +++++G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
PN I + L+ G C +G+++ A + D + +G H N ++Y T+I+G CK G +
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+L +++ K + PD +Y T++D C+ V A ++ S FN+LI
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWV 776
Query: 235 CIVGQLKEAIALLDEMVTKNIN----PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
G+ + +L+ ++ + + P+ TYNI++D CKEG ++ A + M +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
P V+TYTSL++GY + + + + G+ P+ Y+ +IN K M +AL
Sbjct: 837 MPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALV 896
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
L +M KN V D CK +I T +LL K ++ A +++ +
Sbjct: 897 LVDQMFAKNAV----------DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQY 946
Query: 411 QPDVRTYNILMDGLC 425
PD T L++ C
Sbjct: 947 IPDSATVIELINESC 961
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 41/332 (12%)
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
V F L G+ G ++EA+ + + + P + +L+DA + ++ +V
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL---------------------NSMPQR 323
M+++ V +V TY L+ +C V K +L SM +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------ 377
G+ P +Y+ +I+GLCKIK +++A +L EMD + + T++ LIDGL K
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 378 ------------NI--ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
NI Y+ + + K ++KA AL + G+ P + Y L++G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
C E ++ E++ ++ + ++ TY ++ G+C G D A ++ +M +GC P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ + T+I+ + A ++L+EM +G+
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/505 (27%), Positives = 242/505 (47%), Gaps = 21/505 (4%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ S+ R P +I + ILT L KM A+ + +++ P++ T NIL
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ C ++ +AF + + K G PN T ++ LC + ++ A + + +
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
++I++ +LI+GL K+G+ + ++ K+ + + ++Y ++I + D
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
+Y +M+ P + N+ + G+ ++ A+ +E+ + PD +Y+IL+
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
K G E + M +QG + Y ++DG+C +VNKA +L M +G P V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-------------- 376
+Y ++I+GL KI +DEA LF E K I N V ++SLIDG K
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 377 ------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
N+ T+NSLLDAL K+ +++A+ + +++ P+ TY IL++GLC+ +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
A Q++ +G + +YT MI+GL K G EA L + + NG +PD+ + +
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 491 IRALFEKGENYKAEKLLREMMARGL 515
I L A L E RGL
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 228/475 (48%), Gaps = 24/475 (5%)
Query: 61 KMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTI 120
K++ + + + +F P LI + ++ ++ + GY+P
Sbjct: 148 KLREGYDVVQMMRKFKFR---PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI 180
FTTLI+G G+V +AL D + + + + Y I+ K+G+ + + +I
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
E +KPD V Y ++I LCK + +A ++ + R +P +N++I G+ G+
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
EA +LL+ K P V YN ++ K GKV EA V MK+ PN+ TY L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFE-EMKKDAAPNLSTYNIL 383
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+D C +++ A + +SM + G+ PNV++ N M++ LCK + +DEA +F EMD K
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 361 VPNTVTFNSLIDGL--------------------CKSNIITYNSLLDALCKSHHVDKAIA 400
P+ +TF SLIDGL C++N I Y SL+ +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
+ K + +Q PD++ N MD + + G + + + +++ + + R+Y+I+I+GL
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
K G +E L M++ GC+ D + +I + G+ KA +LL EM +G
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 235/505 (46%), Gaps = 56/505 (11%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD+ + +F + + P + + ++ L + TA L ++ G+ P++ T+NI
Sbjct: 359 VDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+++ C ++ A ++ ++ K P+ ITF +LI GL G+V A + ++ ++
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N I Y +LI G+ ++ + + + PD+ + NT +D + K
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++ E+ A R +P +++ LI+G G E L M + D YNI++D F
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 270 CKEGKVKEATNVLAVMMKQGVKP-----------------------------------NV 294
CK GKV +A +L M +G +P NV
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV 657
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
V Y+SL+DG+ V +++A IL + Q+G+TPN+ ++N++++ L K + ++EAL F
Sbjct: 658 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQS 717
Query: 355 MDCKNIVPNTVTFNSLIDGLC--------------------KSNIITYNSLLDALCKSHH 394
M PN VT+ LI+GLC K + I+Y +++ L K+ +
Sbjct: 718 MKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGN 777
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+ +A AL + + G PD YN +++GL R +A + ++ +G P+ +T +
Sbjct: 778 IAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVV 837
Query: 455 MINGLCKEGLFDEALTLLSKMEDNG 479
+++ L K ++A + + + + G
Sbjct: 838 LLDTLHKNDCLEQAAIVGAVLRETG 862
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 196/398 (49%), Gaps = 15/398 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ VDD ++ ++L I + ++ + + + +PD+
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQL 519
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
LN ++C + ++ +I + + P+ +++ LI GL G + +
Sbjct: 520 LNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
QG L+ +Y +I+G CK G+ + QLL +++ K +P VV Y ++ID L K +
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLD 639
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A+ L+ E + RI +VV ++SLI GF VG++ EA +L+E++ K + P++YT+N L+
Sbjct: 640 EAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL 699
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
DA K ++ EA M + PN VTY L++G C V + NKA M ++G+
Sbjct: 700 DALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
P+ SY TMI+GL K + EA LF VP++ +N++I+GL N +
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG-----NRAM 814
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
DA +L ++ R +G+ +T +L+D L
Sbjct: 815 DAF----------SLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 16/210 (7%)
Query: 307 VSEVNKAKYILNSMPQRGVTPNV-QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ +VN+A +R P+ +SYN+++ + + + D + EM P+
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
T ++ G K+N + + +++ +R +P Y L+
Sbjct: 135 TCIEMVLGCVKAN---------------KLREGYDVVQMMRKFKFRPAFSAYTTLIGAFS 179
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ Q + GY TV +T +I G KEG D AL+LL +M+ + D +
Sbjct: 180 AVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGL 515
+ I + + G+ A K E+ A GL
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGL 269
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 245/495 (49%), Gaps = 24/495 (4%)
Query: 28 HNVDDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTG----ITP 82
H D V +F+R++ + F +L ++ Y + + + I+P
Sbjct: 126 HLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
+ ++ N++I C + A V + ++ P+ T+ TL+ GLC ++ A+
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
D + ++G + + Y LI+GLCK G +L+ + K P+ V YNT+I LC
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ A +L MV+ + +P+ VT+ +LI G + +A+ LL M + + + + Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++L+ KEGK +EA ++ M ++G KPN+V Y+ L+DG C + N+AK ILN M
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
G PN +Y++++ G K + +EA+ ++ EMD C N Y
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG---------------CSRNKFCY 470
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ L+D LC V +A+ + K+ GI+PD Y+ ++ GLC G + A ++ ++L
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 443 KGYPVT---VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ P + V TY I+++GLC + A+ LL+ M D GC PD IT T + L EK
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Query: 500 NY-KAEKLLREMMAR 513
+ K L E++ R
Sbjct: 591 SCDKGRSFLEELVVR 605
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 227/461 (49%), Gaps = 33/461 (7%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD + +F + P + ++ L K + A+ L +++ G +P V N+
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNV 262
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI+ C + +T ++ + KG PN +T+ TLI GLCL G++ A+ + +V+
Sbjct: 263 LIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N ++YGTLINGL K + +++LL +E + + +Y+ +I L K+ +A
Sbjct: 323 CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAM 382
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L+ +M P++V ++ L+ G C G+ EA +L+ M+ P+ YTY+ L+ F
Sbjct: 383 SLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGF 442
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
K G +EA V M K G N Y+ L+DG C V V +A + + M G+ P+
Sbjct: 443 FKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+Y+++I GLC I +D AL L+ EM C+ P + + +++TYN LLD L
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQE-EPKS-----------QPDVVTYNILLDGL 550
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL------CEEG--------------- 428
C + +A+ L+ + D+G PDV T N ++ L C++G
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ 610
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
R+ A +++ +L K T+ +++ +CK + A+
Sbjct: 611 RVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 209/421 (49%), Gaps = 27/421 (6%)
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN----QISYGTLINGLCKMGQTRASLQL 176
+F +++ + G L+F+D+VV ++N +S+ +I LCK+ ++++
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 177 LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCI 236
R + + PD Y T++D LCK+ + +A L EM + PS V +N LI G C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
G L L+D M K P+ TYN L+ C +GK+ +A ++L M+ PN VT
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y +L++G A +L+SM +RG N Y+ +I+GL K +EA++L+ +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 357 CKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVD 396
K PN V ++ L+DGLC+ N TY+SL+ K+ +
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+A+ + K++ G + Y++L+DGLC GR+K A V +LT G Y+ +I
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 457 NGLCKEGLFDEALTLLSKM---EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
GLC G D AL L +M E+ PD +T+ ++ L + + +A LL M+ R
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 514 G 514
G
Sbjct: 570 G 570
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 180/341 (52%), Gaps = 19/341 (5%)
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA----MRILPSVVTFNSLIYG 233
R ++ K V +N++++ + + L Y +V M I P+ ++FN +I
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
C + + AI + M + PD YTY L+D CKE ++ EA +L M +G P+
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
V Y L+DG C ++ + ++++M +G PN +YNT+I+GLC +D+A++L
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
M +PN VT+ +LI+GL K T A+ L+ + ++G +
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRAT---------------DAVRLLSSMEERGYHLN 361
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
Y++L+ GL +EG+ + A + + + KG + Y+++++GLC+EG +EA +L+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+M +GC+P+A T+ ++++ F+ G +A ++ +EM G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 158/302 (52%), Gaps = 42/302 (13%)
Query: 257 PD--VYTYNILVDAFCKEGKVKEATNVLAVMMKQG--------------------VKPNV 294
PD V ++ +VD F + VK +VL V++ +G + PN
Sbjct: 128 PDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNG 187
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+++ ++ C + V++A + MP+R P+ +Y T+++GLCK + +DEA+ L E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 355 MDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHH 394
M + P+ V +N LIDGLCK N +TYN+L+ LC
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+DKA++L++++ P+ TY L++GL ++ R +A ++ + +GY + Y++
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+I+GL KEG +EA++L KM + GC P+ + + ++ L +G+ +A+++L M+A G
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 515 LL 516
L
Sbjct: 428 CL 429
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/486 (29%), Positives = 243/486 (50%), Gaps = 18/486 (3%)
Query: 30 VDDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D + + R++ P + + IL ++ K S L ++ G+ P+ VT N
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
L+ YC + AF ++ + + P+ T+ LI GLC G ++ L+ D + +
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++Y TLI+G ++G + + +L+ ++E VK + V +N + LCK+
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 209 FNLYSEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
E+V M P +VT+++LI + VG L A+ ++ EM K I + T N ++D
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILD 459
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
A CKE K+ EA N+L K+G + VTY +L+ G+ +V KA + + M + +TP
Sbjct: 460 ALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITP 519
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
V ++N++I GLC + A+ F E+ ++P+ TFNS+I G CK
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG--------- 570
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
V+KA + +PD T NIL++GLC+EG + A L+ +
Sbjct: 571 ------RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVD 624
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
TV TY MI+ CK+ EA LLS+ME+ G PD T+ + I L E G+ + ++LL
Sbjct: 625 TV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Query: 508 REMMAR 513
++ +
Sbjct: 684 KKFSGK 689
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 262/511 (51%), Gaps = 32/511 (6%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEF------TGITPDIVT 86
+ IF +++R+ P ++ +L LV+ Y ++ S+S E G++ ++ T
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVR---YPSSFSISSAREVFDDMVKIGVSLNVQT 206
Query: 87 LNILINCYCHQAQITSAFSVLAKILKK-GYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
N+L+N YC + ++ A +L +++ + P+ +T+ T++K + G++ + +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
G N+++Y L+ G CK+G + + Q++ ++ V PD+ YN +I+ LC +
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+ L M ++++ P VVT+N+LI G +G EA L+++M + + T+NI
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 266 VDAFCKEGKVKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
+ CKE K + T + ++ G P++VTY +L+ Y V +++ A ++ M Q+G
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN------ 378
+ N + NT+++ LCK + +DEA NL + + + VT+ +LI G +
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKAL 506
Query: 379 --------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
+ T+NSL+ LC + A+ ++ + G+ PD T+N ++ G
Sbjct: 507 EMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGY 566
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
C+EGR++ A E + + + T I++NGLCKEG+ ++AL + + + + D
Sbjct: 567 CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DT 625
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARGL 515
+T+ T+I A + + +A LL EM +GL
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 228/453 (50%), Gaps = 25/453 (5%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCL---NGQVQTA 138
P +I ++ Y H+ + A + K+++ +PN +T TL+ GL + + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIID 197
+ D +V G LN ++ L+NG C G+ +L +L ++ + V PD V YNTI+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
++ K ++D L +M ++P+ VT+N+L+YG+C +G LKEA +++ M N+ P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
D+ TYNIL++ C G ++E ++ M ++P+VVTY +L+DG + +A+ ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGLC- 375
M GV N ++N + LCK + + E+ D P+ VT+++LI
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 376 -------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
K N IT N++LDALCK +D+A L+ +G D T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
Y L+ G E +++ A E+ ++ TV T+ +I GLC G + A+ ++
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 477 DNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
++G +PD TF +II ++G KA + E
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 203/409 (49%), Gaps = 60/409 (14%)
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK---DTLVTDAFNLYSEMVAMRILPSV 224
G+ +LQ+ +K+ +KP+++ NT++ L + ++ A ++ +MV + + +V
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLA 283
TFN L+ G+C+ G+L++A+ +L+ MV++ +NPD TYN ++ A K+G++ + +L
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLL 264
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M K G+ PN VTY +L+ GYC + + +A I+ M Q V P++ +YN +INGLC
Sbjct: 265 DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAG 324
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDG------------------------------ 373
+ E L L M + P+ VT+N+LIDG
Sbjct: 325 SMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 374 -----LCKS---------------------NIITYNSLLDALCKSHHVDKAIALIKKIRD 407
LCK +I+TY++L+ A K + A+ +++++
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+GI+ + T N ++D LC+E +L A ++ +G+ V TY +I G +E ++
Sbjct: 445 KGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEK 504
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
AL + +M+ P TF ++I L G+ A + E+ GLL
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 189/394 (47%), Gaps = 10/394 (2%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ + ++ ++ A L Q+E G+ + VT NI + C + + +
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 107 LAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ +++ G+ P+ +T+ TLIK G + AL+ + +G +N I+ T+++ LC
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
K + + LL + D V Y T+I ++ V A ++ EM ++I P+V
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
TFNSLI G C G+ + A+ DE+ + PD T+N ++ +CKEG+V++A
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+K KP+ T L++G C KA N++ + V +YNTMI+ CK K +
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKL 641
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT--------YNSLLDALCKSHHVDK 397
EA +L +EM+ K + P+ T+NS I L + ++ ++ ++ + V+
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVET 701
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ + + Y+ ++D LC GRLK
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 134/263 (50%), Gaps = 19/263 (7%)
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG---YCLVSEVNKA 313
P ++I + A+ EGK A + M++ +KPN++T +L+ G Y ++ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLID 372
+ + + M + GV+ NVQ++N ++NG C +++AL + M + + P+ VT
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVT------ 242
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
YN++L A+ K + L+ ++ G+ P+ TYN L+ G C+ G LK
Sbjct: 243 ---------YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A ++++ + + TY I+INGLC G E L L+ M+ PD +T+ T+I
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 493 ALFEKGENYKAEKLLREMMARGL 515
FE G + +A KL+ +M G+
Sbjct: 354 GCFELGLSLEARKLMEQMENDGV 376
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 243/488 (49%), Gaps = 31/488 (6%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ ++ + + LLR TP K L S + ++ SL H + + L
Sbjct: 69 NRIETARGVLSSLLRSDSTP--FASPKELFSAFSL----SSPSLKHDFSY-------LLL 115
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
++L+N I+ A + + +G P++ + T L+ L Q + + +++
Sbjct: 116 SVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
F ++ YG I K+ L+L +++ + P V +YN +ID LCK + D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+ EM+A R+LPS++T+N+LI G+C G +++ + + M +I P + T+N L+
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K G V++A NVL M G P+ T++ L DGY + A + + GV
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
N + + ++N LCK +++A + K +VPN V +N++IDG C+ L+
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRK-----GDLVG 407
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
A K I+ + QG++PD YN L+ CE G ++NA++ + + KG
Sbjct: 408 ARMK----------IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
+V TY I+I G ++ FD+ +L +MEDNG MP+ +++ T+I L + + +A+ +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 508 REMMARGL 515
R+M RG+
Sbjct: 518 RDMEDRGV 525
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 240/482 (49%), Gaps = 15/482 (3%)
Query: 34 VSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINC 93
+++F +L P +GK + + VK+ + L ++++ I P + N+LI+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
C ++ A + ++L + P+ IT+ TLI G C G + + + + + A +
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
I++ TL+ GL K G + +L++++ PD ++ + D + A +Y
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
V + + T + L+ C G++++A +L + K + P+ YN ++D +C++G
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
+ A + M KQG+KP+ + Y L+ +C + E+ A+ +N M +GV+P+V++YN
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYN 463
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
+I G + D+ ++ EM+ +P N+++Y +L++ LCK
Sbjct: 464 ILIGGYGRKYEFDKCFDILKEMEDNGTMP---------------NVVSYGTLINCLCKGS 508
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+ +A + + + D+G+ P VR YN+L+DG C +G++++A +++L KG + + TY
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYN 568
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+I+GL G EA LL ++ G PD T+ ++I G + L EM
Sbjct: 569 TLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS 628
Query: 514 GL 515
G+
Sbjct: 629 GI 630
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 252/538 (46%), Gaps = 51/538 (9%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D +F+ +L P +I + ++ K + + + +++ I P ++T N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + A +VL ++ G+ P+ TF+ L G N + + AL ++ V G
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+N + L+N LCK G+ + ++L + K + P+ V+YNT+ID C+ + A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
M + P + +N LI FC +G+++ A +++M K ++P V TYNIL+ +
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
++ + + ++L M G PNVV+Y +L++ C S++ +A+ + M RGV+P V
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC-------------- 375
+ YN +I+G C +++A EM K I N VT+N+LIDGL
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE 589
Query: 376 ------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG- 428
K ++ TYNSL+ + +V + IAL ++++ GI+P ++TY++L+ +EG
Sbjct: 590 ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI 649
Query: 429 ----RLKNAQEVIQDLLT--------------------------KGYPVTVRTYTIMING 458
RL + DLL K + TY +I G
Sbjct: 650 ELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
K G E +L+ +M P+A T+ I++ E + A REM +G L
Sbjct: 710 QLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFL 767
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 244/509 (47%), Gaps = 24/509 (4%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ +V + +FNR+ P + + ++ L K K + A L ++ + P ++T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N LI+ YC +F V ++ +P+ ITF TL+KGL G V+ A +
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
GF + ++ L +G + A+L + VK + + ++++LCK+ +
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A + +A ++P+ V +N++I G+C G L A ++ M + + PD YN L+
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
FC+ G+++ A + M +GV P+V TY L+ GY E +K IL M G
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
PNV SY T+IN LCK + EA + +M+ + + P +N LIDG C
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
N++TYN+L+D L + + +A L+ +I +G++PDV TYN L+ G
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G ++ + +++ G T++TY ++I+ KEG+ + L +M PD +
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFGEM---SLKPDLLV 667
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGL 515
+ ++ G+ KA L ++M+ + +
Sbjct: 668 YNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 244/503 (48%), Gaps = 18/503 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+D ++ + + P F + + A+ + +G+ + T +I
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N C + +I A +L + + KG PN + + T+I G C G + A + + QG
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y LI C++G+ + + + K++ K V P V YN +I + F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++ EM +P+VV++ +LI C +L EA + +M + ++P V YN+L+D
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C +GK+++A M+K+G++ N+VTY +L+DG + ++++A+ +L + ++G+ P+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC-------------- 375
+YN++I+G V + L+ EM I P T++ LI LC
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGE 658
Query: 376 ---KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
K +++ YN +L ++KA L K++ ++ I D TYN L+ G + G+L
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCE 718
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
+ +I ++ + TY I++ G C+ + A +M++ G + D ++
Sbjct: 719 VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 493 ALFEKGENYKAEKLLREMMARGL 515
L E+ + +AE ++ EM R L
Sbjct: 779 GLKEEWRSKEAEIVISEMNGRML 801
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 162/357 (45%), Gaps = 32/357 (8%)
Query: 41 LRMSPTPPIIEFGKILTSLVKMKH-YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQ 99
+++ P +E IL K+ + + ++E G P++V+ LINC C ++
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 100 ITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
+ A V + +G P + LI G C G+++ A +F ++ +G LN ++Y T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV--- 216
LI+GL G+ + LL +I K +KPDV YN++I V LY EM
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 217 ----------------------------AMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
M + P ++ +N +++ + + G +++A L
Sbjct: 630 IKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
+M+ K+I D TYN L+ K GK+ E +++ M + ++P TY ++ G+C V
Sbjct: 690 QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ A M ++G +V N +++GL + EA + +EM+ + + TV
Sbjct: 750 DYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTV 806
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 20/194 (10%)
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-----------NIIT---------Y 382
KM+ EA +LF + + I P++ + L+D L K+ NI+ Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ A K V K + L +++ I P V YN+L+DGLC+ R+ +A+++ ++L
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
+ ++ TY +I+G CK G +++ + +M+ + P ITF T+++ LF+ G
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 503 AEKLLREMMARGLL 516
AE +L+EM G +
Sbjct: 303 AENVLKEMKDLGFV 316
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 218/397 (54%), Gaps = 20/397 (5%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V +++++ QPN TF +I LC G++ A + + G N +SY TLI+G C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 166 KMG---QTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
K+G + + +L+++ V P++ +N +ID KD + + ++ EM+ + P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+V+++NSLI G C G++ EAI++ D+MV+ + P++ TYN L++ FCK +KEA ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ QG P Y L+D YC + +++ + M + G+ P+V +YN +I GLC+
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
++ A LF ++ K + P+ VTF+ L++G C+ KA L+
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKG---------------ESRKAAMLL 493
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV-IQDLLTKGYPVTVRTYTIMINGLCK 461
K++ G++P TYNI+M G C+EG LK A + Q + + V +Y +++ G +
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 462 EGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
+G ++A LL++M + G +P+ IT+E + + ++G
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 229/423 (54%), Gaps = 25/423 (5%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
N+I L+ N + + + G+ L+ +S L+ L K ++ +
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
+++ + ++P+V +N +I++LCK + A ++ +M P+VV++N+LI G+C +
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 238 G---QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
G ++ +A A+L EMV +++P++ T+NIL+D F K+ + + V M+ Q VKPNV
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
++Y SL++G C ++++A + + M GV PN+ +YN +ING CK M+ EAL++F
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 355 MDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHH 394
+ + VP T +N LID CK ++ TYN L+ LC++ +
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
++ A L ++ +G+ PD+ T++ILM+G C +G + A +++++ G TY I
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMP-DAITFETIIRALFEKGENYKAEKLLREMMAR 513
++ G CKEG A + ++ME + + ++ +++ +KG+ A LL EM+ +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 514 GLL 516
GL+
Sbjct: 571 GLV 573
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 244/512 (47%), Gaps = 55/512 (10%)
Query: 44 SPTPPIIEFGKILTSLVKMKHYS------TAIS---LSHQLEFTGITPDIVTLNILINCY 94
SP PP + ++ L++ +H+S T I+ L QL + + PD+ +
Sbjct: 35 SPCPPRYDVA-VIADLIEKQHWSKLGVHVTDINPNELFRQLISSELDPDLCLR--YYSWL 91
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTIT-FTTLIKGLCLNGQVQTALQFHDHVVAQGFH-- 151
+ I+ + + K+L + + + G NG DH V FH
Sbjct: 92 VKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGS--------DHQVHSIFHAI 143
Query: 152 -------LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+N I L+ + + ++ K + ++ +L K+
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENR 203
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
D +Y EM+ +I P+V TFN +I C G++ +A ++++M +P+V +YN
Sbjct: 204 SADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 265 LVDAFCK---EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
L+D +CK GK+ +A VL M++ V PN+ T+ L+DG+ + + + M
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ V PNV SYN++INGLC + EA+++ +M + PN +T+N+LI+G CK++++
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 382 --------------------YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
YN L+DA CK +D AL +++ +GI PDV TYN L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
GLC G ++ A+++ L +KG P V T+ I++ G C++G +A LL +M G
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGLPDLV-TFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMAR 513
P +T+ +++ ++G N KA +R M +
Sbjct: 503 PRHLTYNIVMKGYCKEG-NLKAATNMRTQMEK 533
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 216/415 (52%), Gaps = 18/415 (4%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
DV ++ ++R P + F ++ +L K + A + ++ G +P++V+ N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 92 NCYCH---QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+ YC ++ A +VL ++++ PN TF LI G + + +++ ++ Q
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N ISY +LINGLC G+ ++ + K+ V+P+++ YN +I+ CK+ ++ +A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+++ + +P+ +N LI +C +G++ + AL +EM + I PDV TYN L+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C+ G ++ A + + +G+ P++VT+ LM+GYC E KA +L M + G+ P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+YN ++ G CK + A N+ +M+ + + + N+ +YN LL
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL--------------RMNVASYNVLLQG 550
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+ ++ A L+ ++ ++G+ P+ TY I+ + + ++G + + + + ++ TK
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 137/270 (50%), Gaps = 2/270 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ + +F +L P +I + ++ L S AIS+ ++ G+ P+++T N
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LIN +C + A + + +G P T + LI C G++ + + +
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +Y LI GLC+ G A+ +L ++ K + PD+V ++ +++ C+ A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKA 489
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM-VTKNINPDVYTYNILVD 267
L EM M + P +T+N ++ G+C G LK A + +M + + +V +YN+L+
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
+ ++GK+++A +L M+++G+ PN +TY
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 133/249 (53%), Gaps = 2/249 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ + +S+ ++++ P +I + ++ K A+ + ++ G P N+
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI+ YC +I F++ ++ ++G P+ T+ LI GLC NG ++ A + D + ++G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +++ L+ G C+ G++R + LL+++ +KP + YN ++ CK+ + A
Sbjct: 467 LP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 210 NLYSEMVAMRILP-SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
N+ ++M R L +V ++N L+ G+ G+L++A LL+EM+ K + P+ TY I+ +
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEE 585
Query: 269 FCKEGKVKE 277
+G V +
Sbjct: 586 MVDQGFVPD 594
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 140/486 (28%), Positives = 248/486 (51%), Gaps = 24/486 (4%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + ++ + VK + AI L ++ GI+ ++V LI +C + SA +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
K+ K+G PN++TF+ LI+ NG+++ AL+F+ + G + T+I G K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 167 MGQTRASLQLL-RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ +L+L E L +V + NTI+ LCK +A L S+M + I P+VV
Sbjct: 422 GQKHEEALKLFDESFETGLA--NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
++N+++ G C + A + ++ K + P+ YTY+IL+D + + A V+ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL-NSMPQRGVTPNVQSYNTMINGLCKIKM 344
++ N V Y ++++G C V + +KA+ +L N + ++ + + SYN++I+G K
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNS 384
+D A+ + EM I PN +T+ SL++GLCK+N I Y +
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
L+D CK +++ A AL ++ ++G+ P YN L+ G G + A ++ + +L G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
+ TYT +I+GL K+G A L ++M+ G +PD I + I+ L +KG+ K
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVV 779
Query: 505 KLLREM 510
K+ EM
Sbjct: 780 KMFEEM 785
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 143/578 (24%), Positives = 271/578 (46%), Gaps = 93/578 (16%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D V I N++L + P + L++LV+ + A L ++ G+ D VT +L
Sbjct: 180 DHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLL 239
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTI------------------------------ 120
+ + + A VL++ +++G +P+++
Sbjct: 240 MRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKL 299
Query: 121 ------TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
T+T++I G + A++ D +++ G +N ++ +LI G CK ++L
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
L K+E + P+ V ++ +I+ K+ + A Y +M + + PSV +++I G+
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
+ +EA+ L DE + +V+ N ++ CK+GK EAT +L+ M +G+ PNV
Sbjct: 420 LKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN--------------------- 333
V+Y ++M G+C ++ A+ + +++ ++G+ PN +Y+
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 334 --------------TMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGLCKS- 377
T+INGLCK+ +A L A M + K + + +++NS+IDG K
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 378 -------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
N+ITY SL++ LCK++ +D+A+ + +++++G++ D+ Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+DG C+ +++A + +LL +G + Y +I+G G AL L KM +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G D T+ T+I L + G A +L EM A GL+
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 207/390 (53%), Gaps = 21/390 (5%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
IL+ L K A L ++E GI P++V+ N ++ +C Q + A V + IL+KG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+PN T++ LI G N Q AL+ +H+ + +N + Y T+INGLCK+GQT +
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 175 QLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+LL IE K + + YN+IID K+ + A Y EM I P+V+T+ SL+ G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
C ++ +A+ + DEM K + D+ Y L+D FCK ++ A+ + + ++++G+ P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
Y SL+ G+ + + A + M + G+ ++ +Y T+I+GL K + A L+
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSH 393
EM +VP+ + + +++GL K N++ YN+++ +
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
++D+A L ++ D+GI PD T++IL+ G
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 257/509 (50%), Gaps = 22/509 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+DD + + + +L + ++ ++T K +A+ L ++E G +P+ VT +
Sbjct: 319 NMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFS 378
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+LI + ++ A K+ G P+ T+I+G + + AL+ D
Sbjct: 379 VLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFET 438
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N T+++ LCK G+T + +LL K+E + + P+VV YN ++ C+ + A
Sbjct: 439 GLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++S ++ + P+ T++ LI G + A+ +++ M + NI + Y +++
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 269 FCKEGKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
CK G+ +A +LA M+++ + + ++Y S++DG+ E++ A M G++P
Sbjct: 558 LCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP 617
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-SNIIT----- 381
NV +Y +++NGLCK +D+AL + EM K + + + +LIDG CK SN+ +
Sbjct: 618 NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 382 --------------YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
YNSL+ ++ A+ L KK+ G++ D+ TY L+DGL ++
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKD 737
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
G L A E+ ++ G YT+++NGL K+G F + + + +M+ N P+ + +
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 488 ETIIRALFEKGENYKAEKLLREMMARGLL 516
+I + +G +A +L EM+ +G+L
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 17/427 (3%)
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
N L+N Y Q A ++ ++L+ P + L + A + + +
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRM 224
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
VA G + ++ L+ + + +L++L + + +PD ++Y+ + + CK +
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 206 TDAFNLYSEMVAMRI-LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
A +L EM ++ +PS T+ S+I G + +AI L DEM++ I+ +V
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
L+ CK + A + M K+G PN VT++ L++ + E+ KA M G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
+TP+V +T+I G K + +EAL LF E S GL +N+ N+
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDE--------------SFETGL--ANVFVCNT 448
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
+L LCK D+A L+ K+ +GI P+V +YN +M G C + + A+ V ++L KG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
TY+I+I+G + AL +++ M + + + ++TII L + G+ KA
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 505 KLLREMM 511
+LL M+
Sbjct: 569 ELLANMI 575
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 174/346 (50%), Gaps = 1/346 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+D +F+ +L P + ++ + A+ + + + + I + V
Sbjct: 493 NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQ 552
Query: 89 ILINCYCHQAQITSAFSVLAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+IN C Q + A +LA +++ K + +++ ++I G G++ +A+ ++ +
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCG 612
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G N I+Y +L+NGLCK + +L++ +++ K VK D+ Y +ID CK + +
Sbjct: 613 NGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMES 672
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+SE++ + PS +NSLI GF +G + A+ L +M+ + D+ TY L+D
Sbjct: 673 ASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K+G + A+ + M G+ P+ + YT +++G + K + M + VTP
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
NV YN +I G + +DEA L EM K I+P+ TF+ L+ G
Sbjct: 793 NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 247/485 (50%), Gaps = 52/485 (10%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G++PD+ LN+LI+ +C +++ A S+L + +T+T+ T+I GLC +G A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEA 180
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI-EGKLV------------ 185
QF +V G + +SY TLI+G CK+G + L+ +I E L+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 186 ---------------KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
PDVV +++II+ LCK V + L EM M + P+ VT+ +L
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
+ + A+AL +MV + I D+ Y +L+D K G ++EA ++++
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ 360
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
PNVVTYT+L+DG C +++ A++I+ M ++ V PNV +Y++MING K M++EA++
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVS 420
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKS----------------NIITYNSLLDALC---- 390
L +M+ +N+VPN T+ ++IDGL K+ + N +LDAL
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
+ + + L+K + +G+ D Y L+D + G + A +++ +G P V
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVV 540
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+Y ++I+G+ K G A M + G PD TF ++ + ++G++ KL +M
Sbjct: 541 SYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 511 MARGL 515
+ G+
Sbjct: 600 KSCGI 604
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 198/382 (51%), Gaps = 52/382 (13%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNL-YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA 243
V PD ++N++I + LV D +L YS+M+A + P V N LI+ FC VG+L A
Sbjct: 89 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
I+LL V I+ D TYN ++ C+ G EA L+ M+K G+ P+ V+Y +L+DG
Sbjct: 149 ISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205
Query: 304 YCLVSEVNKAKYILNSMPQ----------------------------RGVTPNVQSYNTM 335
+C V +AK +++ + + G P+V +++++
Sbjct: 206 FCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSI 265
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI---------------- 379
IN LCK V E L EM+ ++ PN VT+ +L+D L K+NI
Sbjct: 266 INRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI 325
Query: 380 ----ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+ Y L+D L K+ + +A K + + P+V TY L+DGLC+ G L +A+
Sbjct: 326 PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF 385
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+I +L K V TY+ MING K+G+ +EA++LL KMED +P+ T+ T+I LF
Sbjct: 386 IITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLF 445
Query: 496 EKGENYKAEKLLREMMARGLLE 517
+ G+ A +L +EM G+ E
Sbjct: 446 KAGKEEMAIELSKEMRLIGVEE 467
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 243/517 (47%), Gaps = 57/517 (11%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F LL + P ++ + ++ L K S+A + Q+ + P++VT + +IN Y
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV----------- 145
+ + A S+L K+ + PN T+ T+I GL G+ + A++ +
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 146 ------------------------VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE 181
V++G L+QI+Y +LI+ K G A+L +++
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 182 GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLK 241
+ + DVV YN +I + K V + Y M I P + TFN ++ G +
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+ L D+M + I P + + NI+V C+ GK++EA ++L MM + PN+ TY +
Sbjct: 591 GILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 302 DGYCLVSEVNKAKYIL---NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
D S+ +A I ++ G+ + Q YNT+I LCK+ M +A + +M+ +
Sbjct: 651 D---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEAR 707
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
+P+TVTFNSL+ G + HV KA++ + + GI P+V TYN
Sbjct: 708 GFIPDTVTFNSLMHGYFVGS---------------HVRKALSTYSVMMEAGISPNVATYN 752
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
++ GL + G +K + + ++ ++G TY +I+G K G ++T+ +M +
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G +P T+ +I G+ +A +LL+EM RG+
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 244/528 (46%), Gaps = 64/528 (12%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ VS+ ++ + P +G ++ L K AI LS ++ G+ + L+
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N +I ++ ++ KG + I +T+LI G + AL + + + +G
Sbjct: 475 LVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERG 534
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +SY LI+G+ K G+ A + + K ++PD+ +N +++S K
Sbjct: 535 MPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA- 268
L+ +M + I PS+++ N ++ C G+++EAI +L++M+ I+P++ TY I +D
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 269 ----------------------------------FCKEGKVKEATNVLAVMMKQGVKPNV 294
CK G K+A V+ M +G P+
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VT+ SLM GY + S V KA + M + G++PNV +YNT+I GL ++ E +E
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M + + P+ T+N+LI G K ++ ++ + ++ G+ P
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIG---------------NMKGSMTIYCEMIADGLVPKT 818
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC-----------KEG 463
TYN+L+ G++ A+E+++++ +G TY MI+GLC K+
Sbjct: 819 STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKA 878
Query: 464 LF-DEALTLLSKM-EDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
++ EA LL +M E+ G +P T I A + G AE+ L+E
Sbjct: 879 MYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKE 926
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/536 (25%), Positives = 229/536 (42%), Gaps = 56/536 (10%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ + MS P + + ++ SL K Y A++L Q+ GI D+V +L++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A +L+ PN +T+T L+ GLC G + +A ++ + N +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y ++ING K G ++ LLRK+E + V P+ Y T+ID L K A L EM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ + + ++L+ +G++KE L+ +MV+K + D Y L+D F K G
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
+ A M ++G+ +VV+Y L+ G +V A + M ++G+ P++ ++N M
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIM 579
Query: 336 ING-----------------------------------LCKIKMVDEALNLFAEMDCKNI 360
+N LC+ ++EA+++ +M I
Sbjct: 580 MNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI 639
Query: 361 VPNTVTFNSLIDGLCKSNII--------------------TYNSLLDALCKSHHVDKAIA 400
PN T+ +D K YN+L+ LCK KA
Sbjct: 640 HPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAM 699
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
++ + +G PD T+N LM G ++ A ++ G V TY +I GL
Sbjct: 700 VMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
GL E LS+M+ G PD T+ +I + G + + EM+A GL+
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 243/508 (47%), Gaps = 21/508 (4%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+N+ + + ++ P ++ F I+ L K L ++E + P+ VT
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
L++ A ++ ++++ +G + + +T L+ GL G ++ A + ++
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
N ++Y L++GLCK G ++ ++ ++ K V P+VV Y+++I+ K ++ +
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEE 417
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A +L +M ++P+ T+ ++I G G+ + AI L EM + + Y + LV+
Sbjct: 418 AVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVN 477
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ G++KE ++ M+ +GV + + YTSL+D + + A M +RG+
Sbjct: 478 HLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW 537
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI---------DGL---- 374
+V SYN +I+G+ K V A + M K I P+ TFN ++ +G+
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 375 -------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
K ++++ N ++ LC++ +++AI ++ ++ I P++ TY I +D +
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
R + + LL+ G ++ + Y +I LCK G+ +A ++ ME G +PD +TF
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTF 716
Query: 488 ETIIRALFEKGENYKAEKLLREMMARGL 515
+++ F KA MM G+
Sbjct: 717 NSLMHGYFVGSHVRKALSTYSVMMEAGI 744
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 180/366 (49%), Gaps = 4/366 (1%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
GI PDI T NI++N Q + K+ G +P+ ++ ++ LC NG+++ A
Sbjct: 568 GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEA 627
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ + ++ H N +Y ++ K + A + + +K +YNT+I +
Sbjct: 628 IHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIAT 687
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
LCK + A + +M A +P VTFNSL++G+ + +++A++ M+ I+P+
Sbjct: 688 LCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V TYN ++ G +KE L+ M +G++P+ TY +L+ G + + + I
Sbjct: 748 VATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYC 807
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
M G+ P +YN +I+ + + +A L EM + + PNT T+ ++I GLCK
Sbjct: 808 EMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK-- 865
Query: 379 IITYNSLLDALCKSHHVDKAIALIKK-IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
+ + ++ K+ ++ +A L+K+ + ++G P +T + + G +A+ +
Sbjct: 866 -LCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924
Query: 438 QDLLTK 443
++ K
Sbjct: 925 KECYKK 930
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 126/479 (26%), Positives = 235/479 (49%), Gaps = 15/479 (3%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ + ++ R++ P + + ++ L K + + + L ++E G+ P++ T I I
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+I A+ +L ++ +G P+ +T+T LI LC ++ A + + +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
++++Y TL++ + Q ++E PDVV + ++D+LCK +AF+
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
M ILP++ T+N+LI G V +L +A+ L M + + P YTY + +D + K
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G A M +G+ PN+V + + +AK I + G+ P+ +
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
YN M+ K+ +DEA+ L +EM ++ C+ ++I NSL++ L K
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEM---------------MENGCEPDVIVVNSLINTLYK 550
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+ VD+A + ++++ ++P V TYN L+ GL + G+++ A E+ + ++ KG P T
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+ + + LCK AL +L KM D GC+PD T+ TII L + G+ +A +M
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 239/509 (46%), Gaps = 22/509 (4%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
++D V+ + + + P + F + L + + A + +++ G PD+VT
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+LI+ C ++ A V K+ ++P+ +T+ TL+ N + + QF +
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G + +++ L++ LCK G + L + + + P++ YNT+I L + + D
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+ M ++ + P+ T+ I + G A+ ++M TK I P++ N +
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ K G+ +EA + + G+ P+ VTY +M Y V E+++A +L+ M + G P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL------------- 374
+V N++IN L K VDEA +F M + P VT+N+L+ GL
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 375 -------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
C N IT+N+L D LCK+ V A+ ++ K+ D G PDV TYN ++ GL +
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN-GCMPDAIT 486
G++K A + YP V T ++ G+ K L ++A +++ N P +
Sbjct: 657 GQVKEAMCFFHQMKKLVYPDFV-TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGL 515
+E +I ++ + A ++A G+
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGI 744
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 252/550 (45%), Gaps = 63/550 (11%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ +D+ + + + ++ P +I ++ +L K A + +++ + P +VT
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N L+ +I A + +++KG PNTITF TL LC N +V AL+ ++
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + +Y T+I GL K GQ + ++ +++ KLV PD V T++ + K +L+
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIE 694
Query: 207 DAF---------------NLYSEMVAMRILPSVVTFNSLIY-------GFCIVGQ----- 239
DA+ NL+ E + IL N++ + G C G
Sbjct: 695 DAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 754
Query: 240 ----------LKEAIALLDEMVTKN--INPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
+ A L E TK+ + P + TYN+L+ + ++ A +V +
Sbjct: 755 IIRYSCKHNNVSGARTLF-EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
G P+V TY L+D Y ++++ + M N ++N +I+GL K VD+
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 348 ALNLFAE-MDCKNIVPNTVTFNSLIDGL--------------------CKSNIITYNSLL 386
AL+L+ + M ++ P T+ LIDGL C+ N YN L+
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
+ K+ D A AL K++ +G++PD++TY++L+D LC GR+ ++L G
Sbjct: 934 NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKME-DNGCMPDAITFETIIRALFEKGENYKAEK 505
V Y ++INGL K +EAL L ++M+ G PD T+ ++I L G +A K
Sbjct: 994 PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053
Query: 506 LLREMMARGL 515
+ E+ GL
Sbjct: 1054 IYNEIQRAGL 1063
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 214/465 (46%), Gaps = 21/465 (4%)
Query: 70 SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGL 129
+L EF G + + N LI+ T A V +++ +G++P+ T+++L+ GL
Sbjct: 175 ALRKMREF-GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGL 233
Query: 130 CLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
+ + + + G N ++ I L + G+ + ++L++++ + PDV
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
V Y +ID+LC + A ++ +M R P VT+ +L+ F L E
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M PDV T+ ILVDA CK G EA + L VM QG+ PN+ TY +L+ G V
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
++ A + +M GV P +Y I+ K AL F +M K I PN V N+
Sbjct: 414 LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNA 473
Query: 370 LIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ L K+ + +TYN ++ K +D+AI L+ ++ + G
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
+PDV N L++ L + R+ A ++ + TV TY ++ GL K G EA+
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593
Query: 470 TLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
L M GC P+ ITF T+ L + E A K+L +MM G
Sbjct: 594 ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 209/426 (49%), Gaps = 19/426 (4%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY- 94
I N L + P + + ++ S++ A+S S +L GI D ++ + I Y
Sbjct: 700 ITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 95 CHQAQITSAFSVLAKILKK-GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
C ++ A ++ K K G QP T+ LI GL ++ A V + G +
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
+Y L++ K G+ +L +++ + + + +N +I L K V DA +LY
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 214 EMVAMRIL-PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
++++ R P+ T+ LI G G+L EA L + M+ P+ YNIL++ F K
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G+ A + M+K+GV+P++ TY+ L+D C+V V++ + + + G+ P+V Y
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 333 NTMINGLCKIKMVDEALNLFAEMD-CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
N +INGL K ++EAL LF EM + I P+ T+NSLI L + +
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM------------ 1047
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
V++A + +I+ G++P+V T+N L+ G G+ ++A V Q ++T G+ T
Sbjct: 1048 ---VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 452 YTIMIN 457
Y + N
Sbjct: 1105 YEQLPN 1110
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/482 (25%), Positives = 218/482 (45%), Gaps = 21/482 (4%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
+++ M P + + I+ LVK A+ HQ++ + PD VTL L+ +
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAS 691
Query: 99 QITSAFSVLAKILKK-GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS- 156
I A+ ++ L QP + + LI + + A+ F + +VA G + S
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+I CK + L K L V+P + YN +I L + ++ A +++ ++
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ +P V T+N L+ + G++ E L EM T + T+NI++ K G V
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 276 KEATNVL-AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
+A ++ +M + P TY L+DG + +AK + M G PN YN
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
+ING K D A LF M + + P+ + TY+ L+D LC
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPD---------------LKTYSVLVDCLCMVGR 976
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT-KGYPVTVRTYT 453
VD+ + K++++ G+ PDV YN++++GL + RL+ A + ++ T +G + TY
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+I L G+ +EA + ++++ G P+ TF +IR G+ A + + M+
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 514 GL 515
G
Sbjct: 1097 GF 1098
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 238/548 (43%), Gaps = 60/548 (10%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+H +DD + +F + + P + + K +A+ +++ GI P+IV
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N + + A + + G P+++T+ ++K G++ A++ ++
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + I +LIN L K + + ++ +++ +KP VV YNT++ L K+ +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A L+ MV P+ +TFN+L C ++ A+ +L +M+ PDV+TYN ++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS------- 319
K G+VKEA MK+ V P+ VT +L+ G S + A I+ +
Sbjct: 651 FGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD 709
Query: 320 --------------MPQRGVTPNVQ-SYNTMINGL---------------CKIKMVDEAL 349
+ + G+ V S + NG+ CK V A
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 350 NLFAEMDCK-NIVPNTVTFNSLIDGL--------------------CKSNIITYNSLLDA 388
LF + + P T+N LI GL C ++ TYN LLDA
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT-KGYPV 447
KS +D+ L K++ + + T+NI++ GL + G + +A ++ DL++ + +
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
T TY +I+GL K G EA L M D GC P+ + +I + GE A L
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 508 REMMARGL 515
+ M+ G+
Sbjct: 950 KRMVKEGV 957
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 15/398 (3%)
Query: 119 TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
T T +++ L ++G+++ D + + + +Y T+ L G + + LR
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALR 177
Query: 179 KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
K+ + YN +I L K T+A +Y M+ PS+ T++SL+ G
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+ + LL EM T + P+VYT+ I + + GK+ EA +L M +G P+VVTYT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
L+D C +++ AK + M P+ +Y T+++ + +D ++EM+
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
VP+ VTF L+D ALCK+ + +A + +RDQGI P++ TYN
Sbjct: 358 GHVPDVVTFTILVD---------------ALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+ GL RL +A E+ ++ + G T TY + I+ K G AL KM+
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G P+ + + +L + G + +A+++ + GL+
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 162/374 (43%), Gaps = 21/374 (5%)
Query: 163 GLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL 221
GL T +S + + G L + N ++++L D + + ++ M I
Sbjct: 91 GLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIK 150
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
T+ ++ + G LK+A L +M + Y+YN L+ K EA V
Sbjct: 151 RDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV 210
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
M+ +G +P++ TY+SLM G +++ +L M G+ PNV ++ I L +
Sbjct: 211 YRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGR 270
Query: 342 IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC--------------------KSNIIT 381
++EA + MD + P+ VT+ LID LC K + +T
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
Y +LLD + +D ++ G PDV T+ IL+D LC+ G A + + +
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMR 390
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
+G + TY +I GL + D+AL L ME G P A T+ I + G++
Sbjct: 391 DQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 502 KAEKLLREMMARGL 515
A + +M +G+
Sbjct: 451 SALETFEKMKTKGI 464
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/540 (27%), Positives = 259/540 (47%), Gaps = 54/540 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + + +RL + S P K + L+ ++ L G TP + N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA-LQFHDHVVAQ 148
+++ C Q+ A ++ + + G +P+ I++ +LI G C NG +++A L +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 149 GF--HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
GF + +S+ +L NG KM + + + + K P+VV Y+T ID+ CK +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A + M + P+VVTF LI G+C G L+ A++L EM ++ +V TY L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
D FCK+G+++ A + + M++ V+PN + YT+++DG+ + + A L M +G+
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF------------------- 367
++ +Y +I+GLC + EA + +M+ ++VP+ V F
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 368 ----------------NSLIDGLC---------------KSNIITYNSLLDALCKSHHVD 396
+++IDG+ K+N + Y L+DALCK
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI 420
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+ L KI + G+ PD Y + GLC++G L +A ++ ++ +G + + YT +I
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
GL +GL EA + +M ++G PD+ F+ +IRA ++G A LL +M RGL+
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 198/418 (47%), Gaps = 20/418 (4%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D V ++ ++ +P ++ + + + K A+ H ++ ++P++VT LI
Sbjct: 146 DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ YC + A S+ ++ + N +T+T LI G C G++Q A + + +V
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N + Y T+I+G + G + +++ L K+ + ++ D+ Y II LC + + +A +
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+M ++P +V F +++ + G++K A+ + +++ + PDV + ++D K
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G++ EA + K N V YT L+D C + + + + + + + G+ P+
Sbjct: 386 NGQLHEAIVYFCIE-----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFM 440
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
Y + I GLCK + +A L M + ++ + + + +LI GL ++
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMV---------- 490
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+A + ++ + GI PD +++L+ +EG + A +++ D+ +G V
Sbjct: 491 -----EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 170/373 (45%), Gaps = 65/373 (17%)
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFN----SLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
+V +A S + LP T N LI C + LK L +V++ P
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK----FLAYLVSRGYTPHR 56
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
++N +V CK G+VK A +++ M + G +P+V++Y SL+DG+C ++ A +L S
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 320 M-PQRGV--TPNVQSYNTMINGLCKIKMVDE----------------------------- 347
+ G P++ S+N++ NG K+KM+DE
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 348 -----ALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITY 382
AL F M + PN VTF LIDG CK+ N++TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+L+D CK + +A + ++ + ++P+ Y ++DG + G NA + + +L
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
+G + + Y ++I+GLC G EA ++ ME + +PD + F T++ A F+ G
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 503 AEKLLREMMARGL 515
A + +++ RG
Sbjct: 357 AVNMYHKLIERGF 369
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 249/500 (49%), Gaps = 21/500 (4%)
Query: 33 VVSIFNRLLRM-SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
V I++ ++ + P +I +L+ LVK + A + ++ G + D + IL+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
C++ ++ ++ KG PN + + T+I G C G ++ A + +GF
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
++GT+ING CK G AS +LL +++ + ++ V N IID+ + D
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
++A P V T+N LI C G+ + A+ LDE K + P+ +Y L+ A+CK
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
+ A+ +L M ++G KP++VTY L+ G + ++ A + + RGV+P+
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-------------- 377
YN +++GLCK A LF+EM +NI+P+ + +LIDG +S
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 378 ------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+++ +N+++ C+S +D+A+A + ++ ++ + PD TY+ ++DG ++ +
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A ++ + + V TYT +ING C +G F A +M+ +P+ +T+ T+I
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Query: 492 RALFEKGENYKAEKLLREMM 511
R+L ++ + E+M
Sbjct: 633 RSLAKESSTLEKAVYYWELM 652
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 229/502 (45%), Gaps = 37/502 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++++ +F L P + FG ++ K + + L +++ G+ + LN
Sbjct: 255 DIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLN 314
Query: 89 ILINC-YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+I+ Y H ++ A S+ I+ +P+ T+ LI LC G+ + A+ F D
Sbjct: 315 NIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G N +SY LI CK + + +LL ++ + KPD+V Y +I L + D
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A N+ +++ + P +N L+ G C G+ A L EM+ +NI PD Y Y L+D
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
F + G EA V ++ +++GVK +VV + +++ G+C +++A +N M + + P
Sbjct: 494 GFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVP 553
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------------ 375
+ +Y+T+I+G K + + A+ +F M+ PN VT+ SLI+G C
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 376 --------KSNIITYNSLLDALCK-SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
N++TY +L+ +L K S ++KA+ + + P+ T+N L+ G +
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Query: 427 E--------------GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
+ G+ E + + G+ Y + LC G+ A
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733
Query: 473 SKMEDNGCMPDAITFETIIRAL 494
KM G PD ++F I+
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGF 755
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/498 (24%), Positives = 224/498 (44%), Gaps = 51/498 (10%)
Query: 55 ILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
+L + + S A+ + + +E PD++ N L++ ++ A V ++ +
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G + + L+KG+C G+V+ + + +G N + Y T+I G CK+G +
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+ ++++ K P + + T+I+ CK+ + L SE+ + SV N++I
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
G + + ++ + PDV TYNIL++ CKEGK + A L K+G+ PN
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
++Y L+ YC E + A +L M +RG P++ +Y +I+GL +D+A+N+
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
++ + + P+ +N L+ GLCK+ LL ++ D+ I PD
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL---------------FSEMLDRNILPD 484
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
Y L+DG G A++V + KG V V + MI G C+ G+ DEAL ++
Sbjct: 485 AYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMN 544
Query: 474 KM-----------------------------------EDNGCMPDAITFETIIRALFEKG 498
+M E N C P+ +T+ ++I +G
Sbjct: 545 RMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQG 604
Query: 499 ENYKAEKLLREMMARGLL 516
+ AE+ +EM R L+
Sbjct: 605 DFKMAEETFKEMQLRDLV 622
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/465 (26%), Positives = 213/465 (45%), Gaps = 37/465 (7%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++ L K A+ + G+ P+ ++ LI YC + A +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ ++G +P+ +T+ LI GL ++G + A+ ++ +G + Y L++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G+ + L ++ + + PD +Y T+ID + +A ++S V + VV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
N++I GFC G L EA+A ++ M +++ PD +TY+ ++D + K+ + A + M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK-IKMV 345
K KPNVVTYTSL++G+C + A+ M R + PNV +Y T+I L K +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCK----------------------------- 376
++A+ + M VPN VTFN L+ G K
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 377 -----SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ YNS L LC V A K+ +G PD ++ ++ G C G K
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSK 762
Query: 432 NAQEV-IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+ + +L KG V VR Y+ ++ + + EA T+L M
Sbjct: 763 QWRNMDFCNLGEKGLEVAVR-YSQVLEQHLPQPVICEASTILHAM 806
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 147/344 (42%), Gaps = 56/344 (16%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTA---ISLSHQLEFTGITPDIVTLNILIN 92
+F+ +L + P + ++ ++ + A SLS + G+ D+V N +I
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVE---KGVKVDVVHHNAMIK 528
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
+C + A + + ++ ++ P+ T++T+I G + TA++ ++
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
N ++Y +LING C G + + + ++++ + + P+VV Y T+I SL K++ + Y
Sbjct: 589 NVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 213 SE-MVAMRILPSVVTFNSLIYGF------------------------------------- 234
E M+ + +P+ VTFN L+ GF
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSD 708
Query: 235 ------------CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
C+ G +K A D+MV K +PD ++ ++ FC G K+ N+
Sbjct: 709 HAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ + V Y+ +++ + + +A IL++M ++ T
Sbjct: 769 FCNLGEKGLEVAVRYSQVLEQHLPQPVICEASTILHAMVEKADT 812
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 239/465 (51%), Gaps = 18/465 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD+ + F + P ILT L ++ A + I ++ T NI
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+IN C + ++ A L + G +P +T+ TL++G L G+++ A + ++G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F + +Y +++ +C G RAS ++LR+++ + PD V YN +I + + AF
Sbjct: 291 FQPDMQTYNPILSWMCNEG--RAS-EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
EMV ++P+ T+N+LI+G + +++ A L+ E+ K I D TYNIL++ +
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C+ G K+A + MM G++P TYTSL+ C ++ +A + + +G+ P++
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDL 467
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
NT+++G C I +D A +L EMD +I P+ VT YN L+ L
Sbjct: 468 VMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT---------------YNCLMRGL 512
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
C ++A L+ +++ +GI+PD +YN L+ G ++G K+A V ++L+ G+ T+
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
TY ++ GL K + A LL +M+ G +P+ +F ++I A+
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 238/486 (48%), Gaps = 22/486 (4%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D++V +RL T I F ++ +++ AI + ++ G P T N +
Sbjct: 141 DELVLAHDRL----ETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHI 196
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ +I +A+ A + + + N TF +I LC G+++ A F + G
Sbjct: 197 LTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGI 256
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
++Y TL+ G G+ + ++ +++ K +PD+ YN I+ +C + ++
Sbjct: 257 KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR 316
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
EM + ++P V++N LI G G L+ A A DEMV + + P YTYN L+
Sbjct: 317 ---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLF 373
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
E K++ A ++ + ++G+ + VTY L++GYC + KA + + M G+ P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALC 390
+Y ++I LC+ EA LF ++ K + P+ V N+L+DG C
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG------------ 481
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
++D+A +L+K++ I PD TYN LM GLC EG+ + A+E++ ++ +G
Sbjct: 482 ---NMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+Y +I+G K+G A + +M G P +T+ +++ L + E AE+LLREM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 511 MARGLL 516
+ G++
Sbjct: 599 KSEGIV 604
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 199/411 (48%), Gaps = 23/411 (5%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++ +++ + + RM + F ++ L K A +E GI P IVT
Sbjct: 203 LNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVT 262
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N L+ + + +I A +++++ KG+QP+ T+ ++ +C G+ L+ +
Sbjct: 263 YNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI- 321
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + +SY LI G G + ++ + + P YNT+I L + +
Sbjct: 322 --GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A L E+ I+ VT+N LI G+C G K+A AL DEM+T I P +TY L+
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
C++ K +EA + ++ +G+KP++V +LMDG+C + +++A +L M +
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN-------- 378
P+ +YN ++ GLC +EA L EM + I P+ +++N+LI G K
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 379 ------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
++TYN+LL L K+ + A L+++++ +GI P+ ++
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 146/275 (53%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
A + ++ G+ P T N LI+ + +I +A ++ +I +KG +++T+ LI
Sbjct: 346 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
G C +G + A HD ++ G Q +Y +LI LC+ +TR + +L K+ GK +KP
Sbjct: 406 GYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
D+VM NT++D C + AF+L EM M I P VT+N L+ G C G+ +EA L+
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
EM + I PD +YN L+ + K+G K A V M+ G P ++TY +L+ G
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKN 585
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
E A+ +L M G+ PN S+ ++I + +
Sbjct: 586 QEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 367 FNSLI---DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
F+ L+ D L + I ++ L+ C+ VD+AI ++++G P T N ++
Sbjct: 140 FDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTL 199
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
L R++NA D+ V T+ IMIN LCKEG +A L ME G P
Sbjct: 200 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGL 515
+T+ T+++ +G A ++ EM ++G
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 291
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 238/480 (49%), Gaps = 22/480 (4%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ ++ + VK + A+ + ++ GI ++ L+N YC ++ A + ++
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G P+ + F+ +++ C N +++ A++F+ + + + + T+I G K
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
A+L++ + M N I CK V A + M I P+VV +N+++
Sbjct: 433 AALEIFNDSFESWIAHGF-MCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
C + + A ++ EM+ K + P+ +TY+IL+D F K + A +V+ M +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYIL-NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
N V Y ++++G C V + +KAK +L N + ++ + + SYN++I+G K+ D A+
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVE 611
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDALC 390
+ EM PN VTF SLI+G CKSN + Y +L+D C
Sbjct: 612 TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
K + + A L ++ + G+ P+V YN L+ G G++ A ++ + ++ G +
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
TYT MI+GL K+G + A L S++ D G +PD I ++ L +KG+ KA K+L EM
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/514 (25%), Positives = 256/514 (49%), Gaps = 32/514 (6%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+++ V + + ++ +I ++ K A+ L +++E G+ PD V +
Sbjct: 325 NMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFS 384
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV-QTALQ-FHDHV- 145
+++ +C ++ A ++ P+++ T+I+G CL + + AL+ F+D
Sbjct: 385 VMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFE 443
Query: 146 --VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
+A GF N+I L+ CK G+ A+ L+ +E K ++P+VV YN ++ + C+
Sbjct: 444 SWIAHGFMCNKI---FLL--FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ A +++SEM+ + P+ T++ LI GF + A ++++M N + YN
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
+++ CK G+ +A +L ++K+ + +Y S++DG+ V + + A M +
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN---- 378
G +PNV ++ ++ING CK +D AL + EM + + + +LIDG CK N
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 379 ----------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
+ YNSL+ +D AI L KK+ + GI D+ TY ++D
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
GL ++G + A ++ +LL G + +++NGL K+G F +A +L +M+ P
Sbjct: 739 GLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTP 798
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ + + T+I +G +A +L EM+ +G++
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/406 (29%), Positives = 204/406 (50%), Gaps = 16/406 (3%)
Query: 54 KILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
KI K A S +E GI P++V N ++ +C + A S+ +++L+K
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G +PN T++ LI G N Q A + + A F N++ Y T+INGLCK+GQT +
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKA 573
Query: 174 LQLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
++L+ I+ K YN+IID K A Y EM P+VVTF SLI
Sbjct: 574 KEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN 633
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
GFC ++ A+ + EM + + D+ Y L+D FCK+ +K A + + + + G+ P
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
NV Y SL+ G+ + +++ A + M G++ ++ +Y TMI+GL K ++ A +L+
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLY 753
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
+E+ IVP+ + L++GL K KA ++++++ + + P
Sbjct: 754 SELLDLGIVPDEILHMVLVNGLSKKGQFL---------------KASKMLEEMKKKDVTP 798
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
+V Y+ ++ G EG L A + ++L KG + ++++G
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 181/348 (52%), Gaps = 1/348 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N+D SIF+ +L P + ++ K K A + +Q+ + + V
Sbjct: 497 MKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVI 556
Query: 87 LNILINCYCHQAQITSAFSVLAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
N +IN C Q + A +L ++K K Y + ++ ++I G G +A++ + +
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
G N +++ +LING CK + +L++ +++ +K D+ Y +ID CK +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDM 676
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A+ L+SE+ + ++P+V +NSLI GF +G++ AI L +MV I+ D++TY +
Sbjct: 677 KTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTM 736
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+D K+G + A+++ + ++ G+ P+ + + L++G + KA +L M ++ V
Sbjct: 737 IDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV 796
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
TPNV Y+T+I G + ++EA L EM K IV + FN L+ G
Sbjct: 797 TPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/543 (23%), Positives = 232/543 (42%), Gaps = 91/543 (16%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D V F ++ P + +L+SLV+ A + +++ G+ D VT +
Sbjct: 185 MDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQL 244
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + + A + +++ +G +P+ GL + VQ A + D V+A
Sbjct: 245 LMRASLRERKPEEAVKIFRRVMSRGAEPD---------GLLFSLAVQAACKTPDLVMA-- 293
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP-DVVMYNTIIDSLCKDTLVTDA 208
L LLR++ GKL P Y ++I + K+ + +A
Sbjct: 294 ------------------------LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ EMV I SV+ SL+ G+C +L +A+ L + M + + PD ++++V+
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEW 389
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG------------------------- 303
FCK ++++A M + P+ V +++ G
Sbjct: 390 FCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG 449
Query: 304 ---------YCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+C +V+ A L M Q+G+ PNV YN M+ C++K +D A ++F+E
Sbjct: 450 FMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE 509
Query: 355 MDCKNIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHH 394
M K + PN T++ LIDG K +N + YN++++ LCK
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 395 VDKAIALIKK-IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
KA +++ I+++ +YN ++DG + G +A E +++ G V T+T
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+ING CK D AL + +M+ D + +I +K + A L E+
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 514 GLL 516
GL+
Sbjct: 690 GLM 692
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 200/443 (45%), Gaps = 62/443 (13%)
Query: 124 TLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK 183
TLI + +N V ++ +F GF L ++ L+N + + ++ + +
Sbjct: 146 TLIPNVMVNNLVDSSKRF-------GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDR 198
Query: 184 LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA 243
V P V N ++ SL + L+ +A +Y++MV + + VT L+ + +EA
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFC--------------------------------- 270
+ + ++++ PD +++ V A C
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIV 318
Query: 271 ---KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
KEG ++EA V+ M+ G+ +V+ TSL++GYC +E+ KA + N M + G+ P
Sbjct: 319 AFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAP 378
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------- 377
+ ++ M+ CK +++A+ + M I P++V +++I G K+
Sbjct: 379 DKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF 438
Query: 378 -----NIITY----NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+ I + N + CK VD A + +K + +GI+P+V YN +M C
Sbjct: 439 NDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+ A+ + ++L KG TY+I+I+G K A ++++M + + + +
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 489 TIIRALFEKGENYKAEKLLREMM 511
TII L + G+ KA+++L+ ++
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLI 581
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 229/468 (48%), Gaps = 22/468 (4%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
I+ L A+ L ++ ++G+ P ++T N L+N C I A ++ ++ + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ-TRAS 173
PN +++ TLIKGLC V AL + + G N+++ +++ LC+ G +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 174 LQLLRKI--EGKLVKP-DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+LL +I + P D+V+ ++DS K+ V A ++ EM + V +N +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I G C G + A + +MV + +NPDV+TYN L+ A CKEGK EA ++ M GV
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
P+ ++Y ++ G C+ +VN+A L SM + + P V +N +I+G + AL+
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
+ M + PN T N+LI G K L+DA + ++R I
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKG-----GRLIDAW----------WVKNEMRSTKI 471
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
PD TYN+L+ C G L+ A ++ ++L +G + TYT ++ GLC +G +A +
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAES 531
Query: 471 LLSKMEDNGCMPDAITFETIIRA---LFEKGENYKAEKLLREMMARGL 515
LLS+++ G D + F + + L GE Y K RG+
Sbjct: 532 LLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATRNRGV 579
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 205/418 (49%), Gaps = 26/418 (6%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
+++++ LCL G++ AL ++ G I++ L+NGLCK G + L+R++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL-K 241
P+ V YNT+I LC V A L++ M I P+ VT N +++ C G +
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 242 EAIALLDEMVTK---NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
LL+E++ N D+ IL+D+ K G V +A V M ++ V + V Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
++ G C + A + M +RGV P+V +YNT+I+ LCK DEA +L M
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 359 NIVPNTVTFNSLIDGLC------KSN--------------IITYNSLLDALCKSHHVDKA 398
+ P+ +++ +I GLC ++N ++ +N ++D + A
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSA 424
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL-TKGYPVTVRTYTIMIN 457
++++ + G++P+V T N L+ G + GRL +A V ++ TK +P T TY +++
Sbjct: 425 LSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT-TYNLLLG 483
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
C G A L +M GC PD IT+ ++R L KG KAE LL + A G+
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 19/395 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++ + + M P+P + + ++ L + + A+ L + + GI P+ VT NI
Sbjct: 172 IEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNI 231
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNT---ITFTTLIKGLCL-NGQVQTALQFHDHV 145
+++ C + I + L + + Q N I T++ C NG V AL+ +
Sbjct: 232 IVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEM 291
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ + + Y +I GLC G A+ + + + V PDV YNT+I +LCK+
Sbjct: 292 SQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKF 351
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+A +L+ M + P +++ +I G CI G + A L M+ ++ P+V +N++
Sbjct: 352 DEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVV 411
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+D + + G A +VL +M+ GVKPNV T +L+ GY + A ++ N M +
Sbjct: 412 IDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI 471
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P+ +YN ++ C + + A L+ EM L G C+ +IITY L
Sbjct: 472 HPDTTTYNLLLGAACTLGHLRLAFQLYDEM--------------LRRG-CQPDIITYTEL 516
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
+ LC + KA +L+ +I+ GI D + IL
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLIL 551
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 31/308 (10%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMV--TKNINPD--VYTYNILVDAFCKEGKVKEATNVL 282
FN L Y I+ + +A L E V TK+ + D + ++ ++ C +GK+ A +
Sbjct: 88 FNVLDY---ILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLR 144
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
M+ GV P ++T+ L++G C + KA ++ M + G +PN SYNT+I GLC +
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS------------------ 384
VD+AL LF M+ I PN VT N ++ LC+ +I N+
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLD 264
Query: 385 ------LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
L+D+ K+ +V +A+ + K++ + + D YN+++ GLC G + A +
Sbjct: 265 IVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMC 324
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
D++ +G V TY +I+ LCKEG FDEA L M++ G PD I+++ II+ L G
Sbjct: 325 DMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 499 ENYKAEKL 506
+ +A +
Sbjct: 385 DVNRANEF 392
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 164/347 (47%), Gaps = 26/347 (7%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
++++I+ LC + A L +M+ ++P ++T N L+ G C G +++A L+ EM
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC---LV 307
+P+ +YN L+ C V +A + M K G++PN VT ++ C ++
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 308 SEVNKA--KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
NK + IL+S Q ++ +++ K V +AL ++ EM KN+ ++V
Sbjct: 243 GNNNKKLLEEILDS-SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 366 TFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKI 405
+N +I GLC S ++ TYN+L+ ALCK D+A L +
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
++ G+ PD +Y +++ GLC G + A E + +L V + ++I+G + G
Sbjct: 362 QNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDT 421
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
AL++L+ M G P+ T +I + G A + EM +
Sbjct: 422 SSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRS 468
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 3/251 (1%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ PD+ T N LI+ C + + A + + G P+ I++ +I+GLC++G V A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+F ++ + + +I+G + G T ++L +L + VKP+V N +I
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
K + DA+ + +EM + +I P T+N L+ C +G L+ A L DEM+ + PD
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+ TY LV C +G++K+A ++L+ + G+ + V + L Y + +A +
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYK 569
Query: 319 ---SMPQRGVT 326
+ RGV+
Sbjct: 570 KWLATRNRGVS 580
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 85/173 (49%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ + ++ + S+A+S+ + + G+ P++ T N LI+ Y ++ A+ V
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ P+T T+ L+ C G ++ A Q +D ++ +G + I+Y L+ GLC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
G+ + + LL +I+ + D V + + + +A+ +Y + +A R
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATR 575
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 214/417 (51%), Gaps = 23/417 (5%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
T L+ GL G+ Q A + ++ +G + I+Y TL+ L + + L L+ K+E
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
+KPD +++N II++ + + A ++ +M P+ TFN+LI G+ +G+L+E
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 243 AIALLDEMVTKN-INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+ LLD M+ + P+ T NILV A+C + K++EA N++ M GVKP+VVT+ +L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 302 DGYCLVSEVNKAK-YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
Y + A+ I+ M V PNV++ T++NG C+ ++EAL F M +
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 361 VPNTVTFNSLIDGL--------------------CKSNIITYNSLLDALCKSHHVDKAIA 400
PN FNSLI G K +++T+++L++A + +
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
+ + + GI PD+ ++IL G G + A++++ + G V YT +I+G C
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 461 KEGLFDEALTLLSKMED-NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G +A+ + KM G P+ T+ET+I E + +KAE+LL++M + ++
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 213/428 (49%), Gaps = 18/428 (4%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
SIFN L+ P +I + ++T+L + KH+ + +SL ++E G+ PD + N +IN
Sbjct: 340 SIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS 399
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA-QGFHLN 153
+ A + K+ + G +P TF TLIKG G+++ + + D ++ + N
Sbjct: 400 SESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPN 459
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK-DTLVTDAFNLY 212
+ L+ C + + ++ K++ VKPDVV +NT+ + + + T +
Sbjct: 460 DRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMII 519
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M+ ++ P+V T +++ G+C G+++EA+ M ++P+++ +N L+ F
Sbjct: 520 PRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNI 579
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
+ V+ +M + GVKP+VVT+++LM+ + V ++ + + I M + G+ P++ ++
Sbjct: 580 NDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAF 639
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
+ + G + ++A + +M + PN V + +I G C +
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG-------------- 685
Query: 393 HHVDKAIALIKKIRD-QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+ KA+ + KK+ G+ P++ TY L+ G E + A+E+++D+ K T +T
Sbjct: 686 -EMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Query: 452 YTIMINGL 459
++ +G
Sbjct: 745 MQLIADGW 752
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 211/440 (47%), Gaps = 18/440 (4%)
Query: 54 KILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
K++ L++ A S+ + L G P ++T L+ Q S S+++K+ K
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G +P+TI F +I +G + A++ + + G ++ TLI G K+G+ S
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 174 LQLLR-KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+LL + ++++P+ N ++ + C + +A+N+ +M + + P VVTFN+L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 233 GFCIVGQLKEAIAL-LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ +G A + + M+ + P+V T +V+ +C+EGK++EA M + GV
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PN+ + SL+ G+ +++++ +++ M + GV P+V +++T++N + + +
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
+ +M I P+ F+ L G ++ +KA ++ ++R G++
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAG---------------EPEKAEQILNQMRKFGVR 668
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLT-KGYPVTVRTYTIMINGLCKEGLFDEALT 470
P+V Y ++ G C G +K A +V + + G + TY +I G + +A
Sbjct: 669 PNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEE 728
Query: 471 LLSKMEDNGCMPDAITFETI 490
LL ME +P T + I
Sbjct: 729 LLKDMEGKNVVPTRKTMQLI 748
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
DV + L++ + G+ +EA ++ ++++G KP+++TYT+L+ + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK- 376
+ + + G+ P+ +N +IN + +D+A+ +F +M P TFN+LI G K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 377 --------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
N T N L+ A C +++A ++ K++ G++PDV T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 417 YNILMDGLCEEGRLKNAQE-VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+N L G A++ +I +L VRT ++NG C+EG +EAL +M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 476 EDNGCMPDAITFETIIRALF 495
++ G P+ F ++I+
Sbjct: 558 KELGVHPNLFVFNSLIKGFL 577
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 99/240 (41%), Gaps = 34/240 (14%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ + F R+ + P + F ++ + + + +E G+ PD+VT +
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N + + + +L+ G P+ F+ L KG G+ + A Q + + G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N + Y +I+G C G+ + ++Q+ +K+ G
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG--------------------------- 699
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ + P++ T+ +LI+GF Q +A LL +M KN+ P T ++ D +
Sbjct: 700 -------IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
DVR+ LM+GL E GR + A + L+ +G+ ++ TYT ++ L ++ F L+L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
SK+E NG PD I F II A E G +A K+ +M G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESG 419
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 202/399 (50%), Gaps = 18/399 (4%)
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
+ +IL G+ N F L+ C G + A + D + + +S+ TLING
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
CK+G +L ++E +PDV Y+ +I++LCK+ + A L+ EM ++P+
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
V F +LI+G G++ +M++K + PD+ YN LV+ FCK G + A N++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M+++G++P+ +TYT+L+DG+C +V A I M Q G+ + ++ ++ G+CK
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEG 464
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIK 403
V +A EM I P+ V TY ++DA CK L+K
Sbjct: 465 RVIDAERALREMLRAGIKPDDV---------------TYTMMMDAFCKKGDAQTGFKLLK 509
Query: 404 KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEG 463
+++ G P V TYN+L++GLC+ G++KNA ++ +L G TY ++ G +
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA 569
Query: 464 LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
+ + + K E G + D ++++I+ L ++++
Sbjct: 570 --NSSKRYIQKPE-IGIVADLASYKSIVNELDRASKDHR 605
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 166/310 (53%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ D +F+ + + S P ++ F ++ K+ + L HQ+E + PD+ T +
Sbjct: 255 NISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LIN C + ++ A + ++ K+G PN + FTTLI G NG++ + + ++++
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK 374
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + + Y TL+NG CK G A+ ++ + + ++PD + Y T+ID C+ V A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ EM I V F++L+ G C G++ +A L EM+ I PD TY +++DA
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FCK+G + +L M G P+VVTY L++G C + ++ A +L++M GV P+
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 329 VQSYNTMING 338
+YNT++ G
Sbjct: 555 DITYNTLLEG 564
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 181/355 (50%), Gaps = 16/355 (4%)
Query: 35 SIFNRLLRMSPTPPIIEF----------------GKILTSLVKMKHYSTAISLSHQLEFT 78
++ +R+++++PT I F ++ K + S A + ++
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
+ P +V+ N LIN YC + F + ++ K +P+ T++ LI LC ++ A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
D + +G N + + TLI+G + G+ + +K+ K ++PD+V+YNT+++
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
CK+ + A N+ M+ + P +T+ +LI GFC G ++ A+ + EM I D
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD 449
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
++ LV CKEG+V +A L M++ G+KP+ VTYT +MD +C + +L
Sbjct: 450 RVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLK 509
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
M G P+V +YN ++NGLCK+ + A L M +VP+ +T+N+L++G
Sbjct: 510 EMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 180/342 (52%), Gaps = 20/342 (5%)
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
++D + K + Y E++ +V FN L+ FC G + +A + DE+ ++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+ P V ++N L++ +CK G + E + M K +P+V TY++L++ C ++++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+ + M +RG+ PN + T+I+G + +D + +M K + P+ V +N+L++G
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 375 CKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
CK+ + ITY +L+D C+ V+ A+ + K++ GI+ D
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
++ L+ G+C+EGR+ +A+ ++++L G TYT+M++ CK+G LL +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
M+ +G +P +T+ ++ L + G+ A+ LL M+ G++
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+LLD + K + +I D G +V +NILM+ C+EG + +AQ+V ++ +
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
TV ++ +ING CK G DE L +ME + PD T+ +I AL ++ + A
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 504 EKLLREMMARGLL 516
L EM RGL+
Sbjct: 330 HGLFDEMCKRGLI 342
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 218/424 (51%), Gaps = 17/424 (4%)
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
Y Q+ A VL + + G +PN + T I +++ AL+F + + G N
Sbjct: 252 YSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPN 311
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
++Y +I G C + + +++LL + K PD V Y TI+ LCK+ + + +L
Sbjct: 312 VVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 214 EMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
+M ++P VT+N+LI+ EA+ L + K D Y+ +V A CKE
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
Query: 273 GKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G++ EA +++ M+ +G P+VVTYT++++G+C + EV+KAK +L M G PN S
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
Y ++NG+C+ EA + + PN++T++ ++ GL + ++
Sbjct: 492 YTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS---------- 541
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+A +++++ +G P N+L+ LC +GR A++ +++ L KG + V
Sbjct: 542 -----EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+T +I+G C+ D AL++L M D T+ T++ L +KG +A +L+++M+
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 512 ARGL 515
+G+
Sbjct: 657 HKGI 660
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 230/447 (51%), Gaps = 24/447 (5%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F +++ S + A+ + ++ G+ P+++ N I+ + ++ A L ++
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
G PN +T+ +I+G C +V+ A++ + + ++G +++SY T++ LCK +
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 172 ASLQLLRKI--EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
L++K+ E LV PD V YNT+I L K +A + + +++
Sbjct: 365 EVRDLMKKMAKEHGLV-PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 230 LIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
+++ C G++ EA L++EM++K + PDV TY +V+ FC+ G+V +A +L VM
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
G KPN V+YT+L++G C + +A+ ++N + +PN +Y+ +++GL + + EA
Sbjct: 484 GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEA 543
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDA 388
++ EM K P V N L+ LC+ N++ + +++
Sbjct: 544 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 603
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
C++ +D A++++ + DV TY L+D L ++GR+ A E+++ +L KG T
Sbjct: 604 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPT 663
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKM 475
TY +I+ C+ G D+ + +L KM
Sbjct: 664 PVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 239/507 (47%), Gaps = 24/507 (4%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D + + + R P ++ + V+ A+ +++ GI P++VT N +I
Sbjct: 260 DALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMI 319
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ-GF 150
YC ++ A +L + KG P+ +++ T++ LC ++ + + G
Sbjct: 320 RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGL 379
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+Q++Y TLI+ L K +L L+ + K + D + Y+ I+ +LCK+ +++A +
Sbjct: 380 VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD 439
Query: 211 LYSEMVAM-RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L +EM++ P VVT+ +++ GFC +G++ +A LL M T P+ +Y L++
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C+ GK EA ++ + + PN +TY+ +M G ++++A ++ M +G P
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK------------- 376
N ++ LC+ EA E K N V F ++I G C+
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 377 -------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
+++ TY +L+D L K + +A L+KK+ +GI P TY ++ C+ G+
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+ + +++ ++++ T+ Y +I LC G +EA TLL K+ DA T
Sbjct: 680 VDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA 737
Query: 490 IIRALFEKGENYKAEKLLREMMARGLL 516
++ +KG A K+ M R L+
Sbjct: 738 LMEGYLKKGVPLSAYKVACRMFNRNLI 764
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 176/328 (53%), Gaps = 21/328 (6%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
+ D ++Y ++++ L K L + + M I + F+ ++ + GQL++A+
Sbjct: 204 RHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+L M + P++ N +D F + ++++A L M G+ PNVVTY ++ GYC
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN-IVPNT 364
+ V +A +L M +G P+ SY T++ LCK K + E +L +M ++ +VP+
Sbjct: 324 DLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQ 383
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
VT+N+LI L K + H D+A+ +K +++G + D Y+ ++ L
Sbjct: 384 VTYNTLIHMLTKHD---------------HADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 425 CEEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
C+EGR+ A+++I ++L+KG+ P V TYT ++NG C+ G D+A LL M +G P+
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 484 AITFETIIRALFEKGENYKAEKLLREMM 511
+++ ++ + G++ +A REMM
Sbjct: 489 TVSYTALLNGMCRTGKSLEA----REMM 512
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 196/395 (49%), Gaps = 18/395 (4%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTG-ITPDIVTLNILINCYCHQAQITSAFSVLAKI 110
+ I+ +L K S A L +++ G PD+VT ++N +C ++ A +L +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
G++PNT+++T L+ G+C G+ A + + + N I+Y +++GL + G+
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ ++R++ K P V N ++ SLC+D +A E + +VV F ++
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 600
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I+GFC +L A+++LD+M N + DV+TY LVD K+G++ EAT ++ M+ +G+
Sbjct: 601 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 660
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
P VTY +++ YC + +V+ IL M R + YN +I LC + ++EA
Sbjct: 661 DPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADT 718
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
L ++ + T +L++G K + A + ++ ++ +
Sbjct: 719 LLGKVLRTASRSDAKTCYALMEGYLKKGVPL---------------SAYKVACRMFNRNL 763
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
PDV+ L L +G++ A +++ L+ +G+
Sbjct: 764 IPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGH 798
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 180/353 (50%), Gaps = 19/353 (5%)
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
K+ Q + +L K G P+ ++ ++ S + + DA + + M + P+++
Sbjct: 221 KLCQGSRRVLVLMKRRGIYRTPEA--FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLL 278
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
N+ I F +L++A+ L+ M I P+V TYN ++ +C +V+EA +L M
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP-QRGVTPNVQSYNTMINGLCKIKM 344
+G P+ V+Y ++M C + + + ++ M + G+ P+ +YNT+I+ L K
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
DEAL + K ID L Y++++ ALCK + +A LI +
Sbjct: 399 ADEALWFLKDAQEKGF---------RIDKL------GYSAIVHALCKEGRMSEAKDLINE 443
Query: 405 IRDQG-IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEG 463
+ +G PDV TY +++G C G + A++++Q + T G+ +YT ++NG+C+ G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 464 LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
EA +++ E++ P++IT+ I+ L +G+ +A ++REM+ +G
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 556
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 159/352 (45%), Gaps = 38/352 (10%)
Query: 36 IFNRLLRMSPTPP-IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
+ N +L PP ++ + ++ ++ A L + G P+ V+ L+N
Sbjct: 440 LINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 499
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKG-------------------------- 128
C + A ++ + + PN+IT++ ++ G
Sbjct: 500 CRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGP 559
Query: 129 ---------LCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK 179
LC +G+ A +F + + +G +N +++ T+I+G C+ + A+L +L
Sbjct: 560 VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDD 619
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
+ DV Y T++D+L K + +A L +M+ I P+ VT+ ++I+ +C +G+
Sbjct: 620 MYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGK 679
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
+ + +A+L++M+++ + YN +++ C GK++EA +L +++ + + T +
Sbjct: 680 VDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYA 737
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
LM+GY A + M R + P+V+ + L VDEA L
Sbjct: 738 LMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKL 789
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 197/360 (54%), Gaps = 15/360 (4%)
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + ++ +L+NG C + ++ + ++E +K DVV+ +ID+LCK+ LV A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ M I P+VVT++SLI G C G+L +A L EM +K INP+V T++ L+DA
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K GK+ + +V +M++ + PNV TY+SL+ G C+ + V++A +L+ M +G TPN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V +Y+T+ NG K VD+ + L +M + + NTV+ N+LI G ++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG---------- 237
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
+D A+ + + G+ P++R+YNI++ GL G ++ A + + +
Sbjct: 238 -----KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD 292
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
+ TYTIMI+G+CK + EA L K++ PD + +I L G +A+ L R
Sbjct: 293 IITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 197/372 (52%), Gaps = 20/372 (5%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
GI PDIVT + L+N +C I A V ++ K G + + + T LI LC N V A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
L+ + +G N ++Y +LI GLCK G+ + + L +++ K + P+V+ ++ +ID+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
K ++ ++Y M+ M I P+V T++SLIYG C+ ++ EAI +LD M++K P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V TY+ L + F K +V + +L M ++GV N V+ +L+ GY +++ A +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
M G+ PN++SYN ++ GL V++AL+ F M T N L +
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ--------KTRNDL-------D 292
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
IITY ++ +CK+ V +A L K++ + ++PD + Y I++ L G A
Sbjct: 293 IITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA----- 347
Query: 439 DLLTKGYPVTVR 450
D L + Y VR
Sbjct: 348 DALNRFYQKHVR 359
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 141/282 (50%), Gaps = 20/282 (7%)
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
+M+ I PD+ T + LV+ FC +K+A V M K G+K +VV T L+D C
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
V A +L M RG++PNV +Y+++I GLCK + +A EMD K I PN +TF+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 369 SLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+LID K N+ TY+SL+ LC + VD+AI ++ + +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
G P+V TY+ L +G + R+ + +++ D+ +G + +I G + G D A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 469 LTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
L + M NG +P+ ++ ++ LF GE KA M
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 160/329 (48%), Gaps = 2/329 (0%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+++ D V + ++ +M ++ ++ +L K + A+ + +++ GI+P++VT
Sbjct: 27 NSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTY 86
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ LI C ++ A L ++ K PN ITF+ LI G++ + ++
Sbjct: 87 SSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ 146
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
N +Y +LI GLC + ++++L + K P+VV Y+T+ + K + V D
Sbjct: 147 MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L +M + + V+ N+LI G+ G++ A+ + M + + P++ +YNI++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
G+V++A + M K +++TYT ++ G C V +A + + + V P
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 328 NVQSYNTMINGLCKIKMVDE--ALNLFAE 354
+ ++Y MI L + M E ALN F +
Sbjct: 327 DFKAYTIMIAELNRAGMRTEADALNRFYQ 355
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 237/499 (47%), Gaps = 25/499 (5%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
+++ ++ P +I F +L S K + +++ I VT NILIN +
Sbjct: 224 AVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGF 283
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
++ A + + G+ +F LI+G C G A D ++ G +
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+Y I LC G+ + +LL + PDVV YNT++ K +A L+ +
Sbjct: 344 STYNIYICALCDFGRIDDARELL----SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
+ A I PS+VT+N+LI G C G L+ A L +EM T+ I PDV TY LV F K G
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM-PQRGVTPNVQSYN 333
+ AT V M+++G+KP+ YT+ G + + +KA + M P++ YN
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------------- 377
I+GLCK+ + +A+ ++ +VP+ VT+ ++I G ++
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 378 ----NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
++ITY L+ K+ +++A +++ +G++P+V T+N L+ G+C+ G + A
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ + +G P +YT++I+ C ++E + L +M D PD T + +
Sbjct: 640 YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKH 699
Query: 494 LFEKGENYKAEKLLREMMA 512
L + E+ + E L R +++
Sbjct: 700 LEKDHESREVEFLERLLLS 718
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 231/479 (48%), Gaps = 18/479 (3%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F +++R P + +L L + + A ++ + GI P ++T N +++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
+ + ++ ++ + + +T+ LI G NG+++ A +FH + GF + S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
+ LI G CK G + + ++ + P YN I +LC + DA L S M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
A P VV++N+L++G+ +G+ EA L D++ +I+P + TYN L+D C+ G ++
Sbjct: 371 A----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
A + M Q + P+V+TYT+L+ G+ ++ A + + M ++G+ P+ +Y T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
G ++ D+A L EM + +T YN +D LCK ++
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTI--------------YNVRIDGLCKVGNLV 532
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
KAI +KI G+ PD TY ++ G E G+ K A+ + ++L K +V TY ++I
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G K G ++A ++M+ G P+ +T ++ + + G +A + L +M G+
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGI-TPDIVTL 87
N+ +++ +LR P + +++ A L ++ T PD+
Sbjct: 459 NLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY 518
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N+ I+ C + A KI + G P+ +T+TT+I+G NGQ + A +D ++
Sbjct: 519 NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLR 578
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ + + I+Y LI G K G+ + Q +++ + V+P+V+ +N ++ +CK + +
Sbjct: 579 KRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDE 638
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A+ +M I P+ ++ LI C + +E + L EM+ K I PD YT+ L
Sbjct: 639 AYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Query: 268 AFCKEGKVKE 277
K+ + +E
Sbjct: 699 HLEKDHESRE 708
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 82/176 (46%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N+ + ++ R+ P + + ++ ++ + A +L ++ + P ++T
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVIT 587
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+LI + ++ AF ++ K+G +PN +T L+ G+C G + A ++ +
Sbjct: 588 YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKME 647
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+G N+ SY LI+ C + ++L +++ K ++PD + + L KD
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 249/528 (47%), Gaps = 54/528 (10%)
Query: 30 VDDVVSIFNRLL-RMSPTPP----------IIEFGKILTSLVKMKHYSTAISLSHQLEFT 78
VDD + + +L + S PP + G++LT I+L +
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTE-------EKIIALISRFSSH 253
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G++P+ V L I+ C A+ +A+ +L+ ++K F L+ L N +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS-- 311
Query: 139 LQFHDHVVAQG---FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK------LVKPDV 189
+ +D V+ + ++ G LIN LCK + +L++ K+ GK ++K D
Sbjct: 312 -RMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADS 370
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEM-VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
+ +NT+ID LCK + +A L M + R P+ VT+N LI G+C G+L+ A ++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
M I P+V T N +V C+ + A M K+GVK NVVTY +L+ C VS
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
V KA Y M + G +P+ + Y +I+GLC+++ +A+ + ++ + + +N
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 369 SLIDGLC--------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
LI C K + ITYN+L+ K + +++++R+
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQD--LLTKGYPVTVRTYTIMINGLCKEGLFD 466
G+ P V TY ++D C G L A ++ +D L +K P TV Y I+IN K G F
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV-IYNILINAFSKLGNFG 669
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+AL+L +M+ P+ T+ + + L EK + KL+ EM+ +
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 224/444 (50%), Gaps = 36/444 (8%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKG--YQPNTIT----FTTLIKGLCLNGQVQTAL-- 139
N++++ + AF VL ++L+K + PN IT + KG L + AL
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+F H G N + I+ LCK + A+ +L + + +N ++ L
Sbjct: 249 RFSSH----GVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN----- 254
++ ++ +L +M ++I P VVT LI C ++ EA+ + ++M K
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGN 364
Query: 255 -INPDVYTYNILVDAFCKEGKVKEATNVLAVM-MKQGVKPNVVTYTSLMDGYCLVSEVNK 312
I D +N L+D CK G++KEA +L M +++ PN VTY L+DGYC ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLET 424
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
AK +++ M + + PNV + NT++ G+C+ ++ A+ F +M+ + +
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV------------ 472
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
K N++TY +L+ A C +V+KA+ +K+ + G PD + Y L+ GLC+ R +
Sbjct: 473 ---KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A V++ L G+ + + Y ++I C + ++ +L+ ME G PD+IT+ T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI- 588
Query: 493 ALFEKGENYKA-EKLLREMMARGL 515
+ F K +++++ E+++ +M GL
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 213/469 (45%), Gaps = 71/469 (15%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
PP F +L+ L + S L +++ I PD+VTL ILIN C ++ A
Sbjct: 294 APP---FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 106 VLAKILKKG------YQPNTITFTTLIKGLCLNGQVQTALQFHDHV-VAQGFHLNQISYG 158
V K+ K + ++I F TLI GLC G+++ A + + + + N ++Y
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYN 410
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
LI+G C+ G+ + +++ +++ +KP+VV NTI+ +C+ + A + +M
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD-------------------- 258
+ +VVT+ +LI+ C V +++A+ ++M+ +PD
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 259 ---------------VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
+ YN+L+ FC + ++ +L M K+G KP+ +TY +L+
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 304 YCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV-P 362
+ + + ++ M + G+ P V +Y +I+ C + +DEAL LF +M + V P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 363 NTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIALI 402
NTV +N LI+ K N+ TYN+L L + + + L+
Sbjct: 651 NTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLM 710
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
++ +Q +P+ T ILM+ L L ++ +Q GY V T
Sbjct: 711 DEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ-----GYSVASPT 754
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ NV+ + + ++L +P + +++ L +++ AI + +L+ G + D++
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N+LI +C + + +L + K+G +P++IT+ TLI + ++ + + +
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLV 205
G +YG +I+ C +G+ +L+L + + V P+ V+YN +I++ K
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A +L EM + P+V T+N+L Q + + L+DEMV ++ P+ T IL
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Query: 266 VD 267
++
Sbjct: 729 ME 730
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 249/521 (47%), Gaps = 40/521 (7%)
Query: 30 VDDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTA---ISLSHQLEFTGITPDIV 85
VDD + + +L + S PP I+ V + T I+L + G++P+ V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
L I+ C A+ +A+ +L+ ++K F L+ L N + + +D V
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS---RMNDLV 317
Query: 146 VAQG---FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK------LVKPDVVMYNTII 196
+ + ++ G LIN LCK + +L++ ++ GK ++K D + +NT+I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 197 DSLCKDTLVTDAFNLYSEM-VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
D LCK + +A L M + R +P+ VT+N LI G+C G+L+ A ++ M I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+V T N +V C+ + A M K+GVK NVVTY +L+ C VS V KA Y
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
M + G +P+ + Y +I+GLC+++ +A+ + ++ + + +N LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 376 --------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
K + ITYN+L+ K + +++++R+ G+ P V
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 416 TYNILMDGLCEEGRLKNAQEVIQD--LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
TY ++D C G L A ++ +D L +K P TV Y I+IN K G F +AL+L
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV-IYNILINAFSKLGNFGQALSLKE 676
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+M+ P+ T+ + + L EK + KL+ EM+ +
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQS 717
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 36/444 (8%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKG--YQPNTIT----FTTLIKGLCLNGQVQTAL-- 139
N++++ + AF VL ++L+K + PN IT + K L + AL
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+F H G N + I+ LCK + + +L + + +N ++ L
Sbjct: 249 RFSSH----GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN----- 254
++ ++ +L +M ++I P VVT LI C ++ EA+ + ++M K
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 255 -INPDVYTYNILVDAFCKEGKVKEATNVLAVM-MKQGVKPNVVTYTSLMDGYCLVSEVNK 312
I D +N L+D CK G++KEA +L M +++ PN VTY L+DGYC ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET 424
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
AK +++ M + + PNV + NT++ G+C+ ++ A+ F +M+ + +
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV------------ 472
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
K N++TY +L+ A C +V+KA+ +K+ + G PD + Y L+ GLC+ R +
Sbjct: 473 ---KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A V++ L G+ + + Y ++I C + ++ +L+ ME G PD+IT+ T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI- 588
Query: 493 ALFEKGENYKA-EKLLREMMARGL 515
+ F K +++++ E+++ +M GL
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 203/433 (46%), Gaps = 33/433 (7%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQL------EFTGITPDIVTLNILINCYCHQAQI 100
P ++ G ++ +L K + A+ + Q+ + I D + N LI+ C ++
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 101 TSAFSVLAKI-LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
A +L ++ L++ PN +T+ LI G C G+++TA + + N ++ T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
++ G+C+ ++ +E + VK +VV Y T+I + C + V A Y +M+
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
P + +LI G C V + +AI +++++ + D+ YN+L+ FC + ++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
+L M K+G KP+ +TY +L+ + + + ++ M + G+ P V +Y +I+
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 340 CKIKMVDEALNLFAEMDCKNIV-PNTVTFNSLIDGLCK--------------------SN 378
C + +DEAL LF +M + V PNTV +N LI+ K N
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPN 686
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+ TYN+L L + + + L+ ++ +Q +P+ T ILM+ L L ++ +Q
Sbjct: 687 VETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Query: 439 DLLTKGYPVTVRT 451
GY V T
Sbjct: 747 -----GYSVASPT 754
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 142/297 (47%), Gaps = 7/297 (2%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ +R+ P ++ I+ + + + A+ +E G+ ++VT LI+ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ + A K+L+ G P+ + LI GLC + A++ + + GF L+ +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y LI C ++L +E + KPD + YNT+I K + +M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM-VTKNINPDVYTYNILVDAFCKEGK 274
+ P+V T+ ++I +C VG+L EA+ L +M + +NP+ YNIL++AF K G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL---NSMPQRGVTPN 328
+A ++ M + V+PNV TY +L CL +E + + +L + M ++ PN
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFK--CL-NEKTQGETLLKLMDEMVEQSCEPN 721
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 121/242 (50%), Gaps = 1/242 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ NV+ + + ++L +P + +++ L +++ AI + +L+ G + D++
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N+LI +C + + +L + K+G +P++IT+ TLI + ++ + + +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLV 205
G +YG +I+ C +G+ +L+L + + V P+ V+YN +I++ K
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A +L EM + P+V T+N+L Q + + L+DEMV ++ P+ T IL
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Query: 266 VD 267
++
Sbjct: 729 ME 730
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 248/518 (47%), Gaps = 40/518 (7%)
Query: 30 VDDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTA---ISLSHQLEFTGITPDIV 85
VDD + + +L + S PP I+ V + T I+L + G++P+ V
Sbjct: 201 VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSV 260
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
L I+ C A+ +A+ +L+ ++K F L+ L N + + +D V
Sbjct: 261 WLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDIS---RMNDLV 317
Query: 146 VAQG---FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK------LVKPDVVMYNTII 196
+ + ++ G LIN LCK + +L++ ++ GK ++K D + +NT+I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLI 377
Query: 197 DSLCKDTLVTDAFNLYSEM-VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
D LCK + +A L M + R +P+ VT+N LI G+C G+L+ A ++ M I
Sbjct: 378 DGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEI 437
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+V T N +V C+ + A M K+GVK NVVTY +L+ C VS V KA Y
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
M + G +P+ + Y +I+GLC+++ +A+ + ++ + + +N LI C
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 376 --------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
K + ITYN+L+ K + +++++R+ G+ P V
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 416 TYNILMDGLCEEGRLKNAQEVIQD--LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
TY ++D C G L A ++ +D L +K P TV Y I+IN K G F +AL+L
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTV-IYNILINAFSKLGNFGQALSLKE 676
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+M+ P+ T+ + + L EK + KL+ EM+
Sbjct: 677 EMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 36/444 (8%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKG--YQPNTIT----FTTLIKGLCLNGQVQTAL-- 139
N++++ + AF VL ++L+K + PN IT + K L + AL
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+F H G N + I+ LCK + + +L + + +N ++ L
Sbjct: 249 RFSSH----GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN----- 254
++ ++ +L +M ++I P VVT LI C ++ EA+ + ++M K
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 255 -INPDVYTYNILVDAFCKEGKVKEATNVLAVM-MKQGVKPNVVTYTSLMDGYCLVSEVNK 312
I D +N L+D CK G++KEA +L M +++ PN VTY L+DGYC ++
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLET 424
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
AK +++ M + + PNV + NT++ G+C+ ++ A+ F +M+ + +
Sbjct: 425 AKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV------------ 472
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
K N++TY +L+ A C +V+KA+ +K+ + G PD + Y L+ GLC+ R +
Sbjct: 473 ---KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A V++ L G+ + + Y ++I C + ++ +L+ ME G PD+IT+ T+I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI- 588
Query: 493 ALFEKGENYKA-EKLLREMMARGL 515
+ F K +++++ E+++ +M GL
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGL 612
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 201/409 (49%), Gaps = 27/409 (6%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQL------EFTGITPDIVTLNILINCYCHQAQI 100
P ++ G ++ +L K + A+ + Q+ + I D + N LI+ C ++
Sbjct: 327 PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRL 386
Query: 101 TSAFSVLAKI-LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
A +L ++ L++ PN +T+ LI G C G+++TA + + N ++ T
Sbjct: 387 KEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNT 446
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
++ G+C+ ++ +E + VK +VV Y T+I + C + V A Y +M+
Sbjct: 447 IVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAG 506
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
P + +LI G C V + +AI +++++ + D+ YN+L+ FC + ++
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
+L M K+G KP+ +TY +L+ + + + ++ M + G+ P V +Y +I+
Sbjct: 567 EMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Query: 340 CKIKMVDEALNLFAEMDCKNIV-PNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
C + +DEAL LF +M + V PNTV YN L++A K + +A
Sbjct: 627 CSVGELDEALKLFKDMGLHSKVNPNTV---------------IYNILINAFSKLGNFGQA 671
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCE----EGRLKNAQEVIQDLLTK 443
++L ++++ + ++P+V TYN L L E E LK E+++ L+ +
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVNQ 720
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ NV+ + + ++L +P + +++ L +++ AI + +L+ G + D++
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N+LI +C + + +L + K+G +P++IT+ TLI + ++ + + +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLV 205
G +YG +I+ C +G+ +L+L + + V P+ V+YN +I++ K
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNF 668
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
A +L EM + P+V T+N+L Q + + L+DEMV +N
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEHLVN 719
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 218/441 (49%), Gaps = 20/441 (4%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D T N +++ C ++T A ++ + + P+ + + L++GL Q+ A+
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+V G + I+Y +I LCK G R +L LL + PDV+ YNT+I +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
A + + + P ++T+ L+ C AI +L++M + PD+ TY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N LV+ C+ G ++E +V+ ++ G++ N VTY +L+ C ++ + ILN M Q
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL-------- 374
P V +YN +INGLCK +++ A++ F +M + +P+ VT+N+++ +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 375 ------------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
C +ITYNS++D L K + KA+ L ++ D GI PD T L+
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
G C ++ A +V+++ +G + TY ++I GLCK+ + A+ ++ M GC P
Sbjct: 463 GFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Query: 483 DAITFETIIRALFEKGENYKA 503
D + I++ + E G +A
Sbjct: 523 DETIYTAIVKGVEEMGMGSEA 543
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 15/402 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I +D + I ++ P I + I+ +L K H TA+ L + +G PD++T
Sbjct: 152 IDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVIT 211
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N +I C A L+ G P IT+T L++ +C A++ + +
Sbjct: 212 YNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G + + ++Y +L+N C+ G +++ I ++ + V YNT++ SLC
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD 331
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+ + + M P+V+T+N LI G C L AI +M+ + PD+ TYN ++
Sbjct: 332 EVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVL 391
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
A KEG V +A +L ++ P ++TY S++DG + KA + + M G+
Sbjct: 392 GAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
P+ + ++I G C+ +V+EA + E + +G+ S TY ++
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAGQVLKETSNRG------------NGIRGS---TYRLVI 496
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
LCK ++ AI +++ + G +PD Y ++ G+ E G
Sbjct: 497 QGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 178/370 (48%), Gaps = 24/370 (6%)
Query: 171 RASLQLLRKI----EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
RA ++ +++ +G + + D N I+ +LC + +TDA L M +P +
Sbjct: 82 RARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPS 141
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++L+ G + QL +A+ +L MV PD TYN+++ CK+G ++ A +L M
Sbjct: 142 CSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMS 201
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
G P+V+TY +++ +A Q G P + +Y ++ +C+
Sbjct: 202 LSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA 261
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLL 386
A+ + +M + P+ VT+NSL++ C+ N +TYN+LL
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
+LC + D+ ++ + P V TYNIL++GLC+ L A + +L +
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
+ TY ++ + KEG+ D+A+ LL +++ C P IT+ ++I L +KG KA +L
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 507 LREMMARGLL 516
+M+ G+
Sbjct: 442 YHQMLDAGIF 451
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 226/502 (45%), Gaps = 58/502 (11%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
+++N +L+ + +P + FG ++ L K S A + + GI+P+ VT ILI+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C + A + ++ G P+++ L+ G C G++ A + GF L
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
Y +LI+GL + + + +L + K +KPD+++Y +I L K + DA L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
S M + I P +N++I C G L+E +L EM PD T+ IL+ + C+
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRN 421
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM------------ 320
G V+EA + + K G P+V T+ +L+DG C E+ +A+ +L+ M
Sbjct: 422 GLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRL 481
Query: 321 ---------------------------PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
G +P++ SYN +ING C+ +D AL L
Sbjct: 482 SHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 354 EMDCKNIVPNTVTFNSLIDGL------------------CKSNIITYNSLLDALCKSHHV 395
+ K + P++VT+N+LI+GL + + Y SL+ C+ V
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKV 601
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
A L K + D T N + + +EG + A + +L T+ +T+ YTI
Sbjct: 602 LVAFNLWMKYLKKISCLDDETANEI-EQCFKEGETERALRRLIELDTRKDELTLGPYTIW 660
Query: 456 INGLCKEGLFDEALTLLSKMED 477
+ GLC+ G F EAL + S + +
Sbjct: 661 LIGLCQSGRFHEALMVFSVLRE 682
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 216/457 (47%), Gaps = 12/457 (2%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITS-AFSVLAKI 110
F ++++ KM A+ +++ PD+ T N+++ + AF+V ++
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
LK PN TF L+ GL G+ A + D + +G N+++Y LI+GLC+ G
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ +L +++ PD V +N ++D CK + +AF L + + ++SL
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSL 309
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I G + +A L M+ KNI PD+ Y IL+ K GK+++A +L+ M +G+
Sbjct: 310 IDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
P+ Y +++ C + + + + M + P+ ++ +I +C+ +V EA
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE 429
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
+F E++ P+ TFN+LIDGLCKS + L L V + +L ++ G
Sbjct: 430 IFTEIEKSGCSPSVATFNALIDGLCKSGELKEARL---LLHKMEVGRPASLFLRLSHSG- 485
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
N D + E G + A + G + +Y ++ING C+ G D AL
Sbjct: 486 -------NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALK 538
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
LL+ ++ G PD++T+ T+I L G +A KL
Sbjct: 539 LLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 234/543 (43%), Gaps = 64/543 (11%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D +F+ + +P + + +++ L + A L ++++ +G PD V N L+
Sbjct: 216 DAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALL 275
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ +C ++ AF +L K G+ +++LI GL + A + + +++ +
Sbjct: 276 DGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK 335
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+ I Y LI GL K G+ +L+LL + K + PD YN +I +LC L+ + +L
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
EM P T LI C G ++EA + E+ +P V T+N L+D CK
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 272 EGKVKEAT---------------------------------------NVLAVMMKQGVKP 292
G++KEA LA G P
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
++V+Y L++G+C +++ A +LN + +G++P+ +YNT+INGL ++ +EA LF
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSN--IITYNSLLDALCKSHHVDKAIA-LIKKIRDQG 409
D + + + SL+ C+ ++ +N + L K +D A I++ +G
Sbjct: 576 YAKD--DFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEG 633
Query: 410 ---------IQPDVRT-------YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
I+ D R Y I + GLC+ GR A V L K VT +
Sbjct: 634 ETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCV 693
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNG--CMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+I+GLCK D A+ + DN MP + ++ +L E E + L M
Sbjct: 694 KLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNY--LLSSLLESTEKMEIVSQLTNRM 751
Query: 512 ARG 514
R
Sbjct: 752 ERA 754
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 188/374 (50%), Gaps = 18/374 (4%)
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
Q + + + G ++ + LI+ KMG +++ +++ +PDV YN I+
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV 171
Query: 199 LCKD-TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+ ++ AF +Y+EM+ P++ TF L+ G G+ +A + D+M + I+P
Sbjct: 172 MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISP 231
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ TY IL+ C+ G +A + M G P+ V + +L+DG+C + + +A +L
Sbjct: 232 NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
+ G ++ Y+++I+GL + + +A L+A M KNI P
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP--------------- 336
Query: 378 NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
+II Y L+ L K+ ++ A+ L+ + +GI PD YN ++ LC G L+ + +
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 438 QDLL-TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
++ T+ +P T+TI+I +C+ GL EA + +++E +GC P TF +I L +
Sbjct: 397 LEMSETESFPDAC-THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 497 KGENYKAEKLLREM 510
GE +A LL +M
Sbjct: 456 SGELKEARLLLHKM 469
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 213/454 (46%), Gaps = 32/454 (7%)
Query: 73 HQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLN 132
+L+ G++ D +LI+ Y A ++ + +P+ T+ +++ + +
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMMR 174
Query: 133 GQVQTALQF--HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVV 190
+V L F ++ ++ N ++G L++GL K G+T + ++ + G+ + P+ V
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
Y +I LC+ DA L+ EM P V N+L+ GFC +G++ EA LL
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
+ Y+ L+D + + +A + A M+K+ +KP+++ YT L+ G ++
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
A +L+SMP +G++P+ YN +I LC +++E +L EM P+ T L
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
I +C++ + V +A + +I G P V T+N L+DGLC+ G L
Sbjct: 415 ICSMCRNGL---------------VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 431 KNAQEVIQDLLTKGYPVTV---------RTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
K A+ ++ + G P ++ R++ M+ + G +A L+ D G
Sbjct: 460 KEARLLLHKMEV-GRPASLFLRLSHSGNRSFDTMV----ESGSILKAYRDLAHFADTGSS 514
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
PD +++ +I G+ A KLL + +GL
Sbjct: 515 PDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 163/348 (46%), Gaps = 29/348 (8%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+ +ID L +D + E+ + + F LI + +G ++A+ M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAV-----MMKQGVKPNVVTYTSLMDGYCL 306
+ PDV+TYN+++ +E E +LA M+K PN+ T+ LMDG
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ A+ + + M RG++PN +Y +I+GLC+ D+A LF EM P++V
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 367 FNSLIDGLCKSNIIT--------------------YNSLLDALCKSHHVDKAIALIKKIR 406
N+L+DG CK + Y+SL+D L ++ +A L +
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
+ I+PD+ Y IL+ GL + G++++A +++ + +KG Y +I LC GL +
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
E +L +M + PDA T +I ++ G +AE++ E+ G
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 18/271 (6%)
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
L+E+ + ++ D Y + +L+ A+ K G ++A M + +P+V TY ++ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR-VMM 173
Query: 307 VSEV--NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
EV A + N M + +PN+ ++ +++GL K +A +F +M + I PN
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
VT+ LI GLC+ D A L +++ G PD +N L+DG
Sbjct: 234 VTYTILISGLCQRG---------------SADDARKLFYEMQTSGNYPDSVAHNALLDGF 278
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
C+ GR+ A E+++ G+ + +R Y+ +I+GL + + +A L + M PD
Sbjct: 279 CKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDI 338
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARGL 515
I + +I+ L + G+ A KLL M ++G+
Sbjct: 339 ILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 233/489 (47%), Gaps = 23/489 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + + +F+ + P ++ +L++LV+ A+ + Q+ ++PD+ T +I
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230
Query: 90 LINCYCHQAQITSAFSVLAKILKK--GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
++N YC + A V AK + G + N +T+ +LI G + G V+ + +
Sbjct: 231 VVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G N ++Y +LI G CK G + + ++ K + D MY ++D C+ + D
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A ++ M+ + + + NSLI G+C GQL EA + M ++ PD +TYN LVD
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+C+ G V EA + M ++ V P V+TY L+ GY + + + M +RGV
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII------- 380
+ S +T++ L K+ +EA+ L+ + + ++ +T+T N +I GLCK +
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 381 -------------TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
TY +L K ++ +A A+ + + +GI P + YN L+ G +
Sbjct: 530 DNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKY 589
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
L +++ +L +G TV TY +I G C G+ D+A +M + G +
Sbjct: 590 RHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNIC 649
Query: 488 ETIIRALFE 496
I +LF
Sbjct: 650 SKIANSLFR 658
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 219/463 (47%), Gaps = 26/463 (5%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
+ PD T N L++ YC + A + ++ +K P +T+ L+KG G L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
++ +G + ++IS TL+ L K+G +++L + + + D + N +I L
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
CK V +A + + R P+V T+ +L +G+ VG LKEA A+ + M K I P +
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 576
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
YN L+ K + + +++ + +G+ P V TY +L+ G+C + ++KA
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDG----- 373
M ++G+T NV + + N L ++ +DEA L ++ D ++P + ++
Sbjct: 637 MIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTC 696
Query: 374 -----------------LCKSNIITYNSLLDALCKSHHVDKAIALIKKI--RDQGIQPDV 414
L N I YN + LCK+ ++ A L + D+ I PD
Sbjct: 697 LKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI-PDE 755
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
TY IL+ G G + A + ++ KG + TY +I GLCK G D A LL K
Sbjct: 756 YTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
+ G P+AIT+ T+I L + G +A +L +M+ +GL+
Sbjct: 816 LPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 199/399 (49%), Gaps = 15/399 (3%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G++ ++VT LI YC + + A V + +K + + L+ G C GQ++ A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
++ HD+++ G N +LING CK GQ + Q+ ++ +KPD YNT++D
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
C+ V +A L +M ++P+V+T+N L+ G+ +G + ++L M+ + +N D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+ + L++A K G EA + ++ +G+ + +T ++ G C + +VN+AK IL+
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
++ P VQ+Y + +G K+ + EA + M+ K I P +N+LI G
Sbjct: 531 NVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG----- 585
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
K H++K L+ ++R +G+ P V TY L+ G C G + A
Sbjct: 586 ----------AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCF 635
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
+++ KG + V + + N L + DEA LL K+ D
Sbjct: 636 EMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 189/348 (54%), Gaps = 23/348 (6%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+++ I+ + LV +A +++ M +PS+++ NSL+ G+ A+ + D+M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ--GVKPNVVTYTSLMDGYCLVS 308
++ ++PDV+T +I+V+A+C+ G V +A V A + G++ NVVTY SL++GY ++
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIG 275
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+V +L M +RGV+ NV +Y ++I G CK +++EA ++F + K +V + +
Sbjct: 276 DVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYG 335
Query: 369 SLIDGLC--------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
L+DG C ++N NSL++ CKS + +A + ++ D
Sbjct: 336 VLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDW 395
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
++PD TYN L+DG C G + A ++ + K TV TY I++ G + G F +
Sbjct: 396 SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDV 455
Query: 469 LTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
L+L M G D I+ T++ ALF+ G+ +A KL ++ARGLL
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 225/475 (47%), Gaps = 64/475 (13%)
Query: 102 SAFSVLAKILK--KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV-------------- 145
S F V ++++ K + + F ++K G V+ AL D++
Sbjct: 136 SGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNS 195
Query: 146 ------------VAQGFHLNQISY---------GTLINGLCKMGQTRASLQLLRKIEGKL 184
VA + IS+ ++N C+ G ++ ++ E L
Sbjct: 196 LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSL 255
Query: 185 -VKPDVVMYNTIID--SLCKDTL-VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
++ +VV YN++I+ ++ D +T L SE R +VVT+ SLI G+C G +
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSR---NVVTYTSLIKGYCKKGLM 312
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+EA + + + K + D + Y +L+D +C+ G++++A V M++ GV+ N SL
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
++GYC ++ +A+ I + M + P+ +YNT+++G C+ VDEAL L +M K +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 361 VPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIA 400
VP +T+N L+ G + ++ I+ ++LL+AL K ++A+
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
L + + +G+ D T N+++ GLC+ ++ A+E++ ++ V+TY + +G
Sbjct: 493 LWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYY 552
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
K G EA + ME G P + T+I F+ K L+ E+ ARGL
Sbjct: 553 KVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 39/385 (10%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
DV+S++ +L+ I +L +L K+ ++ A+ L + G+ D +TLN++I
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ C ++ A +L + +P T+ L G G ++ A +++ +G
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
Y TLI+G K L+ ++ + + P V Y +I C ++ A+
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 212 YSEMV--------------------------AMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
EM+ A +L +V F+ L+ G+ + + EA A
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 246 ---LLDEMVTKNIN---------PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG-VKP 292
L + + +++ P+ YN+ + CK GK+++A + + ++ P
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+ TYT L+ G + ++NKA + + M +G+ PN+ +YN +I GLCK+ VD A L
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKS 377
++ K I PN +T+N+LIDGL KS
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKS 838
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + + K+ + A ++ +E GI P I N LI+ + +
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ ++ +G P T+ LI G C G + A ++ +G LN + N L +
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 167 MGQTRASLQLLRKI-EGKLVKPDVVMYNTIIDSLCKDTLVTD--AFNLYSEMVAMRILPS 223
+ + + LL+KI + L+ P +++ L T A ++ + ++P+
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKN-INPDVYTYNILVDAFCKEGKVKEATNVL 282
+ +N I G C G+L++A L ++++ + PD YTY IL+ G + +A +
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
M +G+ PN+VTY +L+ G C + V++A+ +L+ +PQ+G+TPN +YNT+I+GL K
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Query: 343 KMVDEALNLFAEMDCKNIVPNT 364
V EA+ L +M K +V +
Sbjct: 839 GNVAEAMRLKEKMIEKGLVRGS 860
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 241/492 (48%), Gaps = 60/492 (12%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ D+V+ +ILI+ + + A +L K++K+G +PN IT+T +I+GLC G+++ A
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ +++ G +++ Y TLI+G+C+ G + +L +E + ++P ++ YNT+I+
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
LC V++A + V+ ++ V+T+++L+ + V + + + + I D
Sbjct: 392 LCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+ NIL+ AF G EA + M + + P+ TY +++ GYC ++ +A + N
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID------ 372
+ + V+ V YN +I+ LCK M+D A + E+ K + + T +L+
Sbjct: 507 ELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Query: 373 ----------GLCKSNI-ITYNSLLDA---LCKSHHVDKAIALIKKIRDQGI-------- 410
GL + N + L DA LCK + AI + +R +G+
Sbjct: 566 GDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI 625
Query: 411 --------------------------QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
DV Y I+++GLC+EG L A + ++G
Sbjct: 626 LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRG 685
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
+ TY +INGLC++G EAL L +E+ G +P +T+ +I L ++G AE
Sbjct: 686 VTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAE 745
Query: 505 KLLREMMARGLL 516
KLL M+++GL+
Sbjct: 746 KLLDSMVSKGLV 757
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 242/539 (44%), Gaps = 90/539 (16%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ + ++++L ++ L +LE G D V + I+ Y + A
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++++KG + ++++ LI GL G V+ AL ++ +G N I+Y +I GLCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
MG+ + L +I ++ D +Y T+ID +C+ + AF++ +M I PS++T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N++I G C+ G++ EA DE V+K + DV TY+ L+D++ K + + +
Sbjct: 385 YNTVINGLCMAGRVSEA----DE-VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL 439
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ + ++V L+ + L+ +A + +MP+ +TP+ +Y TMI G CK ++
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIE 499
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EAL +F E+ ++ S + YN ++DALCK +D A ++ ++
Sbjct: 500 EALEMFNELRKSSV----------------SAAVCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 407 DQGIQPDVRTYNILMDG-----------------------------------LCEEGRLK 431
++G+ D+ T L+ LC+ G +
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603
Query: 432 NAQEVIQDLLTKGYPVT----------------------------------VRTYTIMIN 457
A EV + KG VT V YTI+IN
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
GLCKEG +AL L S + G + IT+ ++I L ++G +A +L + GL+
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV 722
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 258/581 (44%), Gaps = 113/581 (19%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NV++ + + ++++ P +I + I+ L KM A L +++ GI D
Sbjct: 292 NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ C + + AFS+L + ++G QP+ +T+ T+I GLC+ G+V A + V++
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADE-----VSK 406
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKL----------------------- 184
G + I+Y TL++ K+ A L++ R+ +E K+
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 185 -----------VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+ PD Y T+I CK + +A +++E+ + + V +N +I
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDA 525
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA------------------------- 268
C G L A +L E+ K + D++T L+ +
Sbjct: 526 LCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC 585
Query: 269 ----------FCKEGKVKEATNVLAVMMKQGVK---PNVVTYTSL-----MDGYCLVSEV 310
CK G + A V +M ++G+ P+ + T + +D Y LV V
Sbjct: 586 LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLV--V 643
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
N + L+SM +V Y +INGLCK + +ALNL + + + NT+T+NSL
Sbjct: 644 NAGETTLSSM-------DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSL 696
Query: 371 IDGLCK--------------SNI------ITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
I+GLC+ NI +TY L+D LCK A L+ + +G+
Sbjct: 697 INGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGL 756
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
P++ YN ++DG C+ G+ ++A V+ + T + MI G CK+G +EAL+
Sbjct: 757 VPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALS 816
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
+ ++ +D D F +I+ KG +A LLREM+
Sbjct: 817 VFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/443 (27%), Positives = 219/443 (49%), Gaps = 29/443 (6%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG--YQPNTITFTTLIKGLCLNGQVQ 136
G P +T LI + + ++ +A VL + K Y + + +I G C G+ +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 137 TALQFHDHVVAQGFHL-NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
AL F + V G + N ++Y TL++ LC++G+ L+R++E + + D V Y+
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
I K + DA EMV + VV+++ LI G G ++EA+ LL +M+ + +
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P++ TY ++ CK GK++EA + ++ G++ + Y +L+DG C +N+A
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M QRG+ P++ +YNT+INGLC V EA + K +V + +T+++L+D
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 376 K--------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
K +++ N LL A +A AL + + + + PD
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
TY ++ G C+ G+++ A E+ +L V Y +I+ LCK+G+ D A +L ++
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIEL 542
Query: 476 EDNGCMPDAITFETIIRALFEKG 498
+ G D T T++ ++ G
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANG 565
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 214/490 (43%), Gaps = 76/490 (15%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N+D V+ I R L ++ +L + + M Y A +L + +TPD T
Sbjct: 425 VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTAT 484
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+I YC QI A + + L+K + + +I LC G + TA + +
Sbjct: 485 YATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELW 543
Query: 147 AQGFHLNQISYGTLI-----NG------------------------------LCKMGQTR 171
+G +L+ + TL+ NG LCK G
Sbjct: 544 EKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFE 603
Query: 172 ASLQL------------------------LRKIEGKLV----------KPDVVMYNTIID 197
A++++ LR ++ L+ DV+ Y II+
Sbjct: 604 AAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
LCK+ + A NL S + + + +T+NSLI G C G L EA+ L D + + P
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
TY IL+D CKEG +A +L M+ +G+ PN++ Y S++DGYC + + A ++
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC-K 376
+ VTP+ + ++MI G CK ++EAL++F E KNI + F LI G C K
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTK 843
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
+ LL + S V + LI ++ D + L++ LCE+GR+ A ++
Sbjct: 844 GRMEEARGLLREMLVSESV---VKLINRV-DAELAESESIRGFLVE-LCEQGRVPQAIKI 898
Query: 437 IQDLLTKGYP 446
+ ++ + YP
Sbjct: 899 LDEISSTIYP 908
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 200/414 (48%), Gaps = 21/414 (5%)
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
+ +S L +LK G+ P + ++ L + LQF+ + ++ ++N Y
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 159 TLINGLCKMGQTRASLQLLR-KIEGKLVKPDVVMYNTIID--SLCKDTLVTDAFNLYSEM 215
+ + + + + + I + P M +++I S+ +D L +
Sbjct: 66 IVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCL 125
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN-P-DVYTYNILVDAFCKEG 273
PS +TF SLIY F G++ AI +L+ M KN+N P D + + ++ FCK G
Sbjct: 126 RNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIG 185
Query: 274 KVKEATNVLAVMMKQGV-KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
K + A + GV PN+VTYT+L+ C + +V++ + ++ + G + Y
Sbjct: 186 KPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFY 245
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
+ I+G K + +AL EM K + + V+++ LIDGL K
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEG-------------- 291
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+V++A+ L+ K+ +G++P++ TY ++ GLC+ G+L+ A + +L+ G V Y
Sbjct: 292 -NVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
+I+G+C++G + A ++L ME G P +T+ T+I L G +A+++
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV 404
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 157/311 (50%), Gaps = 21/311 (6%)
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAF 269
YS++ + +I + ++ + + F + + ++A ++ ++K +I P + + L+ F
Sbjct: 48 FYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHGF 107
Query: 270 C--KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
++ K + + G P+ +T+ SL+ + E++ A +L M + V
Sbjct: 108 SITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNY 167
Query: 328 NVQSY--NTMINGLCKIKMVDEALNLF-AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
++ + +I+G CKI + AL F + +D +VPN ++TY +
Sbjct: 168 PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPN---------------LVTYTT 212
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
L+ ALC+ VD+ L++++ D+G + D Y+ + G + G L +A ++++ KG
Sbjct: 213 LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG 272
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
V +Y+I+I+GL KEG +EAL LL KM G P+ IT+ IIR L + G+ +A
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAF 332
Query: 505 KLLREMMARGL 515
L +++ G+
Sbjct: 333 VLFNRILSVGI 343
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 234/488 (47%), Gaps = 18/488 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ V +F+ + S ++ + + LV+ + A ++ ++ G + T +
Sbjct: 25 IDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSR 84
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
I+ C + ++L+ + G+ P+ F + LC +V A+Q +V +G
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +SY LINGL + G+ ++++ + V PD ++ LC V A+
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 210 NLYSEMV-AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ +E + + R+ S V +N+LI GFC G++++A AL M PD+ TYN+L++
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA-KYILNSMPQRGVTP 327
+ +K A V+A M++ G++ + +Y L+ +C VS +K +++ M RG
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC- 323
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
+V SY+T+I C+ +A LF EM K +V N++TY SL+
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV---------------MNVVTYTSLIK 368
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
A + + A L+ ++ + G+ PD Y ++D LC+ G + A V D++
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP 428
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
+Y +I+GLC+ G EA+ L M+ C PD +TF+ II L + A K+
Sbjct: 429 DAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVW 488
Query: 508 REMMARGL 515
+MM +G
Sbjct: 489 DQMMDKGF 496
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 207/445 (46%), Gaps = 51/445 (11%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ + ++ L K+K + +L +E G PDI N+ ++ C + ++ A ++
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G +P+ +++T LI GL G+V A++ + ++ G + + L+ GLC +
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 172 ASLQLL-RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ +++ +I+ VK V+YN +I CK + A L S M + P +VT+N L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN--------------------------- 263
+ + LK A ++ EMV I D Y+YN
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 264 --------ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
L++ FC+ ++A + M ++G+ NVVTYTSL+ + + AK
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L+ M + G++P+ Y T+++ LCK VD+A +F +M I P+ +++NSLI GLC
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+S +T +AI L + ++ + PD T+ ++ GL +L A +
Sbjct: 442 RSGRVT---------------EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLC 460
V ++ KG+ + +I C
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 175/364 (48%), Gaps = 16/364 (4%)
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
+++Y + I L K G ++Q+ ++ + YN I L +++ A +Y
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
+M M T++ I G C V + ALL +M T PD++ +N+ +D C+E
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
KV A M+++G +P+VV+YT L++G +V A I N+M + GV+P+ ++
Sbjct: 129 KVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACA 188
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
++ GLC + VD A + AE + K + + YN+L+ CK+
Sbjct: 189 ALVVGLCHARKVDLAYEMVAE--------------EIKSARVKLSTVVYNALISGFCKAG 234
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
++KA AL + G +PD+ TYN+L++ + LK A+ V+ +++ G + +Y
Sbjct: 235 RIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 454 IMINGLCKEGLFDEALTLLSK-MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
++ C+ D+ + K ME G D +++ T+I KA +L EM
Sbjct: 295 QLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 513 RGLL 516
+G++
Sbjct: 354 KGMV 357
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 159/347 (45%), Gaps = 1/347 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLN 88
V D V I+N ++R +P ++ L + A + + +++ + V N
Sbjct: 165 VTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYN 224
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ +C +I A ++ + + K G +P+ +T+ L+ N ++ A +V
Sbjct: 225 ALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS 284
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G L+ SY L+ C++ + K DVV Y+T+I++ C+ + A
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ L+ EM ++ +VVT+ SLI F G A LLD+M ++PD Y ++D
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK G V +A V M++ + P+ ++Y SL+ G C V +A + M + P+
Sbjct: 405 LCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPD 464
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
++ +I GL + K + A ++ +M K + ++LI C
Sbjct: 465 ELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 132/292 (45%), Gaps = 35/292 (11%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ +++ K A +L + G PD+VT N+L+N Y + A V+A+++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 112 KKGYQ-------------------------------P----NTITFTTLIKGLCLNGQVQ 136
+ G Q P + ++++TLI+ C +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 137 TALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTII 196
A + + + +G +N ++Y +LI + G + + +LL ++ + PD + Y TI+
Sbjct: 343 KAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL 402
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
D LCK V A+ ++++M+ I P +++NSLI G C G++ EAI L ++M K
Sbjct: 403 DHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECC 462
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
PD T+ ++ + K+ A V MM +G + +L+ C +S
Sbjct: 463 PDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 83/172 (48%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N +F + + ++ + ++ + ++ + S A L Q+ G++PD +
Sbjct: 340 NTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYT 399
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+++ C + A+ V +++ P+ I++ +LI GLC +G+V A++ + + +
Sbjct: 400 TILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
+++++ +I GL + + A+ ++ ++ K D + +T+I + C
Sbjct: 460 ECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ +++ + +P I + IL L K + A + + + ITPD ++ N LI+ C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
++T A + + K P+ +TF +I GL ++ A + D ++ +GF L++
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 156 SYGTLINGLCKM 167
TLI C M
Sbjct: 502 VSDTLIKASCSM 513
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 152/256 (59%), Gaps = 15/256 (5%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
+K DVV+ I+D LCKD +A NL++EM I P+V+T+N +I FC G+ +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
LL M+ K INPD+ T++ L++AF KE KV EA + M++ + P +TY S++DG+
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C V+ AK +L+SM +G +P+V +++T+ING CK K VD + +F EM + IV NT
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 185
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
VT+ +LI G C+ +D A L+ ++ G+ PD T++ ++ GL
Sbjct: 186 VTYTTLIHGFCQVG---------------DLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 425 CEEGRLKNAQEVIQDL 440
C + L+ A +++DL
Sbjct: 231 CSKKELRKAFAILEDL 246
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 137/240 (57%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+ + + T ++ LC +G A + +G N ++Y +I+ C G+ + Q
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
LLR + K + PD+V ++ +I++ K+ V++A +Y EM+ I P+ +T+NS+I GFC
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
++ +A +LD M +K +PDV T++ L++ +CK +V + M ++G+ N V
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
TYT+L+ G+C V +++ A+ +LN M GV P+ +++ M+ GLC K + +A + ++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 137/241 (56%), Gaps = 3/241 (1%)
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
+++ LCK G + L ++ K + P+V+ YN +IDS C +DA L M+
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
+I P +VTF++LI F ++ EA + EM+ +I P TYN ++D FCK+ +V +A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+L M +G P+VVT+++L++GYC V+ I M +RG+ N +Y T+I+G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC-KSNIITYNSLLDALCKS--HHV 395
C++ +D A +L EM + P+ +TF+ ++ GLC K + ++L+ L KS HH+
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHL 254
Query: 396 D 396
+
Sbjct: 255 E 255
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 134/261 (51%), Gaps = 15/261 (5%)
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M +I DV +VD CK+G A N+ M ++G+ PNV+TY ++D +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ A +L M ++ + P++ +++ +IN K + V EA ++ EM +I P T
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT----- 115
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
ITYNS++D CK VD A ++ + +G PDV T++ L++G C+ R
Sbjct: 116 ----------ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 165
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+ N E+ ++ +G TYT +I+G C+ G D A LL++M G PD ITF
Sbjct: 166 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 490 IIRALFEKGENYKAEKLLREM 510
++ L K E KA +L ++
Sbjct: 226 MLAGLCSKKELRKAFAILEDL 246
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 127/233 (54%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
I+ L K ++ A +L ++ GI P+++T N +I+ +CH + + A +L +++K
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ +TF+ LI +V A + + ++ I+Y ++I+G CK + +
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
++L + K PDVV ++T+I+ CK V + ++ EM I+ + VT+ +LI+GF
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
C VG L A LL+EM++ + PD T++ ++ C + ++++A +L + K
Sbjct: 196 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 123/245 (50%)
Query: 78 TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
+ I D+V +++ C +A ++ ++ +KG PN +T+ +I C +G+
Sbjct: 4 SHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
A Q H++ + + + +++ LIN K + + ++ +++ + P + YN++ID
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
CK V DA + M + P VVTF++LI G+C ++ + + EM + I
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 183
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ TY L+ FC+ G + A ++L M+ GV P+ +T+ ++ G C E+ KA IL
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Query: 318 NSMPQ 322
+ +
Sbjct: 244 EDLQK 248
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-- 377
M Q + +V +++ LCK A NLF EM K I PN +T+N +ID C S
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 378 ------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
+I+T+++L++A K V +A + K++ I P TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
++DG C++ R+ +A+ ++ + +KG V T++ +ING CK D + + +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ + +T+ T+I + G+ A+ LL EM++ G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 113/216 (52%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
++F + P ++ + ++ S +S A L + I PDIVT + LIN +
Sbjct: 31 NLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAF 90
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
+ +++ A + ++L+ P TIT+ ++I G C +V A + D + ++G +
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+++ TLING CK + +++ ++ + + + V Y T+I C+ + A +L +E
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 210
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
M++ + P +TF+ ++ G C +L++A A+L+++
Sbjct: 211 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 91/184 (49%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
D + ++ P I+ F ++ + VK + S A + ++ I P +T N +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ +C Q ++ A +L + KG P+ +TF+TLI G C +V ++ + +G
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N ++Y TLI+G C++G A+ LL ++ V PD + ++ ++ LC + AF +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 212 YSEM 215
++
Sbjct: 243 LEDL 246
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + I+ +LR S P I + ++ K A + + G +PD+VT +
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LIN YC ++ + + ++ ++G NT+T+TTLI G C G + A + +++ G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIE 181
+ I++ ++ GLC + R + +L ++
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 221/486 (45%), Gaps = 50/486 (10%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+F ++ + P + ++ +LVK A Q+ G PD T NILI+ C
Sbjct: 167 VFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVC 226
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ + A ++ ++ ++G +PN T+T LI G + G+V AL+ + + + + N+
Sbjct: 227 KKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 156 SYGTLINGL------CKMGQ-----------------------------TRASLQLLRKI 180
+ T ++G+ CK + + + Q LRKI
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
+ PD +N + L K + + ++ V+ + P + L+ +
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRF 406
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
E L +M + VY+YN ++D CK +++ A L M +G+ PN+VT+ +
Sbjct: 407 SEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTF 466
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ GY + +V K +L + G P+V +++ +IN LC+ K + +A + F EM I
Sbjct: 467 LSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
PN ITYN L+ + C + D+++ L K+++ G+ PD+ YN
Sbjct: 527 EPNE---------------ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNAT 571
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+ C+ ++K A+E+++ +L G TY+ +I L + G EA + S +E +GC
Sbjct: 572 IQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGC 631
Query: 481 MPDAIT 486
+PD+ T
Sbjct: 632 VPDSYT 637
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 193/461 (41%), Gaps = 20/461 (4%)
Query: 74 QLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
Q+ F G+ P N +I+ + A+ ++ G +P+ T+ LI G+C G
Sbjct: 170 QISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 134 QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYN 193
V A++ + +G N +Y LI+G G+ +L+ L + + + P+
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIR 289
Query: 194 TIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK 253
T + + + AF + + V +++++Y KE L ++ +
Sbjct: 290 TFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
PD T+N + K + E + + +GVKP Y L+ ++
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
L M G+ +V SYN +I+ LCK + ++ A EM + I PN VTFN+ + G
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 374 LC--------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
K ++IT++ +++ LC++ + A K++ + GI+P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
TYNIL+ C G + ++ + G + Y I CK +A LL
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
M G PD T+ T+I+AL E G +A ++ + G
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 199/449 (44%), Gaps = 57/449 (12%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
+ L L G + +++ + G+ ++ LI ++G + + +I
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
+KP +YN +ID+L K + A+ + +M + P T+N LI+G C G + E
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
AI L+ +M + P+V+TY IL+D F G+V EA L +M + + PN T + +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 303 G---------------------------------YCLV--SEVNKAKYILNSMPQRGVTP 327
G YCL S + L + +RG P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP-------------NTVTFNSL---- 370
+ ++N ++ L K + E +F + + P N F+
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 371 ----IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
+DGL S++ +YN+++D LCK+ ++ A + +++D+GI P++ T+N + G
Sbjct: 414 KQMGVDGLL-SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G +K V++ LL G+ V T++++IN LC+ +A +M + G P+ IT
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGL 515
+ +IR+ G+ ++ KL +M GL
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGL 561
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 131/269 (48%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
H++ + IF+ + P + ++ +L+ + +S Q+ G+ + +
Sbjct: 369 HDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSY 428
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N +I+C C +I +A L ++ +G PN +TF T + G + G V+ + ++
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV 488
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
GF + I++ +IN LC+ + + + +++ ++P+ + YN +I S C
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ L+++M + P + +N+ I FC + ++K+A LL M+ + PD +TY+ L+
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
A + G+ EA + + + + G P+ T
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 205/432 (47%), Gaps = 15/432 (3%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+D + IF R++ + ++ L + + L + GI P+ T
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N +IN Y Q + VL + K G N +T+T L++ NG++ A + D +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G + Y +LI+ C+ G + + L ++ K + P Y +ID +CK +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L +EM + + + V FN+LI G+C G + EA + D M K DV+T N +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
F + + EA L MM+ GVK + V+YT+L+D YC V +AK + M +GV P
Sbjct: 443 CFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
N +YN MI CK + EA L A M+ + P++ T+ SLI G C ++
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD--------- 553
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+VD+A+ L ++ +G+ + TY +++ GL + G+ A + ++ KGY +
Sbjct: 554 ------NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTI 607
Query: 448 TVRTYTIMINGL 459
+ YT +I +
Sbjct: 608 DNKVYTALIGSM 619
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 219/443 (49%), Gaps = 29/443 (6%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G++ D + + + + +I + +++ G + + T +++GLC G+V+ +
Sbjct: 184 GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG--KLVKPDVVMYNTII 196
+ +G +Y T+IN K + +EG K++K D V+YN +
Sbjct: 244 KKLIKEFSVKGIKPEAYTYNTIINAYVKQ-------RDFSGVEGVLKVMKKDGVVYNKVT 296
Query: 197 DSL-----CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+L K+ ++DA L+ EM I V + SLI C G +K A L DE+
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
K ++P YTY L+D CK G++ A ++ M +GV V + +L+DGYC V+
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+A I + M Q+G +V + NT+ + ++K DEA M +
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM---------------M 461
Query: 372 DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+G K + ++Y +L+D CK +V++A L ++ +G+QP+ TYN+++ C++G++K
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A+++ ++ G TYT +I+G C DEA+ L S+M G +++T+ +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 492 RALFEKGENYKAEKLLREMMARG 514
L + G++ +A L EM +G
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKG 604
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 189/404 (46%), Gaps = 20/404 (4%)
Query: 132 NGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVM 191
NG + L+ D++V +G +++ S + K + L++ R++ VK V
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+++ LC+ V + L E I P T+N++I + +L M
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
+ + TY +L++ K GK+ +A + M ++G++ +V YTSL+ C +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+A + + + ++G++P+ +Y +I+G+CK+ + A L EM K + V FN+LI
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 372 DGLCK--------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
DG C+ +++ T N++ + D+A + ++ + G++
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVK 466
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
+Y L+D C+EG ++ A+ + ++ +KG TY +MI CK+G EA L
Sbjct: 467 LSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ ME NG PD+ T+ ++I +A +L EM +GL
Sbjct: 527 RANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 230/492 (46%), Gaps = 20/492 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ D S L+ P + ++L L K AI + + +GI PD
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
L+N C + + A ++ K+ GY NT+T+ L++GLC+ G + +LQF + ++ +
Sbjct: 146 YLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK 205
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N +Y L+ K T +++LL +I K +P++V YN ++ CK+ DA
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ E+ A +VV++N L+ C G+ +EA +LL EM + P V TYNIL+++
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 269 FCKEGKVKEATNVLAVMMK--QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
G+ ++A VL M K + +Y ++ C +V+ L+ M R
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCK 385
Query: 327 PNVQSYNTMINGLCKI-KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
PN +YN I LC+ V EA + + K C + Y S+
Sbjct: 386 PNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQ-------------KCCTHDF--YKSV 429
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL-LTKG 444
+ +LC+ + A L+ ++ G PD TY+ L+ GLC EG A EV+ + ++
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 489
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
TV + MI GLCK D A+ + M + MP+ T+ ++ + + E A+
Sbjct: 490 CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAK 549
Query: 505 KLLREMMARGLL 516
++L E+ R ++
Sbjct: 550 EVLDELRLRKVI 561
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 182/378 (48%), Gaps = 25/378 (6%)
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ A+ F H+ + H + +S G + L T + I G KPD+ +
Sbjct: 19 RKAVGFVSHIPSGFLHFSSVSKG-VARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFS 77
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
D + ++D+F+ +V P+V L+Y C +LK+AI +++ MV+ I
Sbjct: 78 DDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGI 137
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
PD Y LV+ CK G V A ++ M G N VTY +L+ G C++ +N++
Sbjct: 138 IPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQ 197
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+ + Q+G+ PN +Y+ ++ K + DEA+ L E+ K PN V++N L+ G C
Sbjct: 198 FVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFC 257
Query: 376 --------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
K+N+++YN LL LC ++A +L+ ++ P V
Sbjct: 258 KEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVV 317
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKG---YPVTVRTYTIMINGLCKEGLFDEALTLL 472
TYNIL++ L GR + A +V+++ ++KG + VT +Y +I LCKEG D + L
Sbjct: 318 TYNILINSLAFHGRTEQALQVLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCL 376
Query: 473 SKMEDNGCMPDAITFETI 490
+M C P+ T+ I
Sbjct: 377 DEMIYRRCKPNEGTYNAI 394
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 115/236 (48%), Gaps = 2/236 (0%)
Query: 280 NVLAVMMKQGVKPNVVTYTS-LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+VL++ + V + S + G+ S V+K + + Q ++P ++ T+
Sbjct: 7 SVLSMASPESSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSAF-TITGS 65
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
K + + + D N+ + SL+ G K N+ LL LCK++ + KA
Sbjct: 66 SWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKA 125
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
I +I+ + GI PD Y L++ LC+ G + A ++++ + GYP TY ++ G
Sbjct: 126 IRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRG 185
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
LC G +++L + ++ G P+A T+ ++ A +++ +A KLL E++ +G
Sbjct: 186 LCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG 241
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 205/414 (49%), Gaps = 26/414 (6%)
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+ TI+ TT+++ L L L+F D V +GF + S+ ++ L + +
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 175 QLLRKIEGK---LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
L IE + VK +N++I S L ++ L+ M M I PSV+TFNSL+
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 232 YGFCIVGQLKEAIALLDEM-VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
G+ A L DEM T + PD YT+N L++ FCK V EA + M
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG--VTPNVQSYNTMINGLCKIKMVDEA 348
P+VVTY +++DG C +V A +L+ M ++ V PNV SY T++ G C + +DEA
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+ +F +M + + PN VT+N+LI GL +++ Y+ + D L + A
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAH--RYDEIKDILIGGNDAFTTFA-------- 350
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
PD T+NIL+ C+ G L A +V Q++L +Y+++I LC FD A
Sbjct: 351 ---PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRA 407
Query: 469 LTLLSKMED-------NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
TL +++ + + C P A + + L G+ +AEK+ R++M RG+
Sbjct: 408 ETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV 461
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 194/392 (49%), Gaps = 33/392 (8%)
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
+ +LI G + S++L + ++ + P V+ +N+++ L K A +L+ EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 217 -AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ P TFN+LI GFC + EA + +M + NPDV TYN ++D C+ GKV
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 276 KEATNVLAVMMKQG--VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K A NVL+ M+K+ V PNVV+YT+L+ GYC+ E+++A + + M RG+ PN +YN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 334 TMINGLCKIKMVDEALN-LFAEMDC-KNIVPNTVTFNSLIDGLCKSNII----------- 380
T+I GL + DE + L D P+ TFN LI C + +
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 381 ---------TYNSLLDALCKSHHVDKAIALIKKIRDQGI-------QPDVRTYNILMDGL 424
+Y+ L+ LC + D+A L ++ ++ + +P YN + + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
C G+ K A++V + L+ +G +Y +I G C+EG F A LL M +PD
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARGLL 516
T+E +I L + GE A L+ M+ L
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/553 (24%), Positives = 240/553 (43%), Gaps = 82/553 (14%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFT-GITPDIVTLNIL 90
+ V +F + +M +P ++ F +L+ L+K A L ++ T G+TPD T N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
IN +C + + AF + + P+ +T+ T+I GLC G+V+ A H V G
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA-----HNVLSGM 270
Query: 151 -------HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC--- 200
H N +SY TL+ G C + ++ + + + +KP+ V YNT+I L
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 201 -----KDTLV--TDAF---------------------------NLYSEMVAMRILPSVVT 226
KD L+ DAF ++ EM+ M++ P +
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNI-------NPDVYTYNILVDAFCKEGKVKEAT 279
++ LI C+ + A L +E+ K + P YN + + C GK K+A
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
V +MK+GV+ + +Y +L+ G+C + A +L M +R P++++Y +I+GL
Sbjct: 451 KVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK--------------------SNI 379
KI A + M + +P TF+S++ L K NI
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNI 569
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
++ L S +KA +++ + D G + L+ LCE +L +A ++
Sbjct: 570 DLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE---LLGYLCENRKLLDAHTLVLF 626
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
L K V + T +I GLCK EA +L +++ + G ++ ++R E
Sbjct: 627 CLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG-NHQQLSCHVVLRNALEAAG 685
Query: 500 NYKAEKLLREMMA 512
++ + + + MA
Sbjct: 686 KWEELQFVSKRMA 698
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 220/482 (45%), Gaps = 38/482 (7%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F ++ S + ++ L ++ GI+P ++T N L++ + + A + ++
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 112 KK-GYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQ--ISYGTLINGLCKM 167
+ G P++ TF TLI G C N V A + F D + +H N ++Y T+I+GLC+
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD---MELYHCNPDVVTYNTIIDGLCRA 257
Query: 168 GQTRASLQLLRKIEGKL--VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
G+ + + +L + K V P+VV Y T++ C + +A ++ +M++ + P+ V
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 226 TFNSLIYGFCIVGQLKEAIALL----DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
T+N+LI G + E +L D T PD T+NIL+ A C G + A V
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIGGNDAFTT--FAPDACTFNILIKAHCDAGHLDAAMKV 375
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV-------TPNVQSYNT 334
M+ + P+ +Y+ L+ C+ +E ++A+ + N + ++ V P +YN
Sbjct: 376 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNP 435
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
M LC +A +F ++ K V + ++ +LI G C+
Sbjct: 436 MFEYLCANGKTKQAEKVFRQL-MKRGVQDPPSYKTLITGHCREG---------------K 479
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
A L+ + + PD+ TY +L+DGL + G A + +Q +L Y T+
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS 539
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
++ L K +E+ L++ M + + ++R LF + KA ++R + G
Sbjct: 540 VLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNG 599
Query: 515 LL 516
L
Sbjct: 600 YL 601
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/421 (28%), Positives = 214/421 (50%), Gaps = 16/421 (3%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS---VLA 108
FG ++ LV + A L +++ I +V+ +IL++ ++ F V
Sbjct: 54 FGYMVLRLVSANKFKAAEDLIVRMK---IENCVVSEDILLSICRGYGRVHRPFDSLRVFH 110
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM- 167
K+ P+ + T++ L Q+ A +F+ ++ G S LI LC+
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTF 227
G A L++ ++ + PD Y T+I LC+ + +A L++EMV P+VVT+
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 228 NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
SLI G C + EA+ L+EM +K I P+V+TY+ L+D CK+G+ +A + +MM
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
+G +PN+VTYT+L+ G C ++ +A +L+ M +G+ P+ Y +I+G C I E
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 348 ALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
A N EM I PN +T+N ++ T N ++ LC +++ +A L +R
Sbjct: 351 AANFLDEMILGGITPNRLTWN--------IHVKTSNEVVRGLC-ANYPSRAFTLYLSMRS 401
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+GI +V T L+ LC++G + A +++ +++T G + T+ ++I + + E
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE 461
Query: 468 A 468
A
Sbjct: 462 A 462
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 179/353 (50%), Gaps = 9/353 (2%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+H D + +F+++ P + +L LV+ + A + G+ P + +
Sbjct: 99 VHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVAS 158
Query: 87 LNILINCYC-HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
LN+LI C + + + + ++ K+G P++ T+ TLI GLC G++ A + +
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
V + ++Y +LINGLC +++ L +++ K ++P+V Y++++D LCKD
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A L+ M+A P++VT+ +LI G C +++EA+ LLD M + + PD Y +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY-------TSLMDGYCLVSEVNKAKYILN 318
+ FC K +EA N L M+ G+ PN +T+ ++ G C + ++A +
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYL 397
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
SM RG++ V++ +++ LCK +A+ L E+ +P+ T+ LI
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 214/473 (45%), Gaps = 75/473 (15%)
Query: 108 AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ---GFHLNQISYGTLINGL 164
+K++ + N IT + +IK + V+ ++ D A+ G+ +Q S+G ++ L
Sbjct: 3 SKVMMFKWSKN-ITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRL 61
Query: 165 CKMGQTRASLQLL--RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
+ +A+ L+ KIE +V D+++ +I + D+ ++ +M P
Sbjct: 62 VSANKFKAAEDLIVRMKIENCVVSEDILL--SICRGYGRVHRPFDSLRVFHKMKDFDCDP 119
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK-EGKVKEATNV 281
S + +++ QL A M + P V + N+L+ A C+ +G V +
Sbjct: 120 SQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKI 179
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
M K+G P+ TY +L+ G C +++AK + M ++ P V +Y ++INGLC
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 342 IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIIT 381
K VDEA+ EM K I PN T++SL+DGLCK N++T
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
Y +L+ LCK + +A+ L+ ++ QG++PD Y ++ G C + + A + +++
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 442 -----------------------------------------TKGYPVTVRTYTIMINGLC 460
++G V V T ++ LC
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK---GENYKAEKLLREM 510
K+G F +A+ L+ ++ +GC+P T++ +I +K GE ++ LLR++
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE--ASDTLLRDL 470
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 215/458 (46%), Gaps = 24/458 (5%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA- 138
+TP +T N LI I A +++AK+ + GYQ + + ++ +I+ L + ++ +
Sbjct: 195 LTP--LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVM 252
Query: 139 -LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
L+ + + L+ +I G K G +LQLL + + +II
Sbjct: 253 LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+L +A L+ E+ I P +N+L+ G+ G LK+A +++ EM + ++P
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
D +TY++L+DA+ G+ + A VL M V+PN ++ L+ G+ E K +L
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVL 432
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
M GV P+ Q YN +I+ K +D A+ F M + I P+ VT+N+LID CK
Sbjct: 433 KEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKH 492
Query: 378 N--------------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
TYN ++++ D L+ K++ QGI P+V T+
Sbjct: 493 GRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 418 NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
L+D + GR +A E ++++ + G + Y +IN + GL ++A+ M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 478 NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+G P + ++I A E + +A +L+ M G+
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 201/446 (45%), Gaps = 15/446 (3%)
Query: 69 ISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKG 128
+ L ++E + D+ +N +I + + A +L G T T ++I
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 129 LCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPD 188
L +G+ A + + G +Y L+ G K G + + ++ ++E + V PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 189 VVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
Y+ +ID+ A + EM A + P+ F+ L+ GF G+ ++ +L
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLK 433
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
EM + + PD YN+++D F K + A M+ +G++P+ VT+ +L+D +C
Sbjct: 434 EMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
A+ + +M +RG P +YN MIN + D+ L +M + I+PN VT
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+L+ D KS + AI +++++ G++P YN L++ + G
Sbjct: 554 TLV---------------DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+ A + + + G ++ +IN ++ EA +L M++NG PD +T+
Sbjct: 599 LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 489 TIIRALFEKGENYKAEKLLREMMARG 514
T+++AL + K + EM+ G
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 188/390 (48%), Gaps = 15/390 (3%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
I+++L A +L +L +GI P N L+ Y + A S+++++ K+G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ T++ LI G+ ++A + A N + L+ G G+ + +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
Q+L++++ VKPD YN +ID+ K + A + M++ I P VT+N+LI
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C G+ A + + M + P TYNI+++++ + + + +L M QG+ PNV
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
VT+T+L+D Y N A L M G+ P+ YN +IN + + ++A+N F
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M DGL K +++ NSL++A + +A A+++ +++ G++PDV
Sbjct: 610 MTS--------------DGL-KPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
TY LM L + + V ++++ G
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 191/430 (44%), Gaps = 22/430 (5%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+ILI+ ++ AF +L + +T+ LI N ++ AL +
Sbjct: 171 SILIHALGRSEKLYEAF-----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQ 225
Query: 148 QGFHLNQISYGTLINGLCKMGQTRAS--LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
G+ + ++Y +I L + + + L+L ++IE ++ DV + N II K
Sbjct: 226 DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDP 285
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+ A L A + T S+I G+ EA AL +E+ I P YN L
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ + K G +K+A ++++ M K+GV P+ TY+ L+D Y A+ +L M V
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
PN ++ ++ G + + EM + P+ +N +ID K N +
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCL----- 460
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
D A+ ++ +GI+PD T+N L+D C+ GR A+E+ + + +G
Sbjct: 461 ----------DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
TY IMIN + +D+ LL KM+ G +P+ +T T++ + G A +
Sbjct: 511 LPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIE 570
Query: 506 LLREMMARGL 515
L EM + GL
Sbjct: 571 CLEEMKSVGL 580
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 35/364 (9%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
++F L + P + +L VK A S+ ++E G++PD T ++LI+ Y
Sbjct: 325 ALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAY 384
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ-------------- 140
+ + SA VL ++ QPN+ F+ L+ G G+ Q Q
Sbjct: 385 VNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDR 444
Query: 141 -FH--------------------DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK 179
F+ D ++++G +++++ TLI+ CK G+ + ++
Sbjct: 445 QFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
+E + P YN +I+S D L +M + ILP+VVT +L+ + G+
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
+AI L+EM + + P YN L++A+ + G ++A N VM G+KP+++ S
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
L++ + +A +L M + GV P+V +Y T++ L ++ + ++ EM
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 360 IVPN 363
P+
Sbjct: 685 CKPD 688
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 143/327 (43%), Gaps = 17/327 (5%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA--IALLDE 249
YN +I + ++ + A NL ++M V ++ +I ++ + L E
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+ + DV N ++ F K G +A +L + G+ T S++
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+A+ + + Q G+ P ++YN ++ G K + +A ++ +EM+ + + P+ T
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT--- 376
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
Y+ L+DA + + A ++K++ +QP+ ++ L+ G + G
Sbjct: 377 ------------YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGE 424
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+ +V++++ + G + Y ++I+ K D A+T +M G PD +T+ T
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 490 IIRALFEKGENYKAEKLLREMMARGLL 516
+I + G + AE++ M RG L
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCL 511
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 27/276 (9%)
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
Y+IL+ A + K+ EA + KQ + P +TY +L+ +++ KA ++ M
Sbjct: 170 YSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEA--LNLFAEMDCKNIVPNTVTFNSLIDGLCKSN- 378
Q G + +Y+ +I L + +D L L+ E++ + + N +I G KS
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 379 -------------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
T S++ AL S +A AL +++R GI+P R YN
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L+ G + G LK+A+ ++ ++ +G TY+++I+ G ++ A +L +ME
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
P++ F ++ ++GE K ++L+EM + G+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D ++ F+R+L P + + ++ K + A + +E G P T NI
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+IN Y Q + +L K+ +G PN +T TTL+ +G+ A++ + + + G
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ Y LIN + G + ++ R + +KP ++ N++I++ +D +AF
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ M + P VVT+ +L+ V + ++ + +EM+ PD ++L A
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ P ++ LN LIN + + AF+VL + + G +P+ +T+TTL+K L + Q
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQT-RAS 173
++ ++ G ++ + L + L M QT RAS
Sbjct: 674 PVVYEEMIMSGCKPDRKARSMLRSALRYMKQTLRAS 709
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 220/460 (47%), Gaps = 15/460 (3%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ S K+ + + +++ GI P + T N L+N + SA V +
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ +T+ T+IKG C GQ Q A++ + +G ++I+Y T+I + +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
L ++++ K ++ ++ +I LCK+ + + + ++ M+ P+V + LI G+
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
G +++AI LL M+ + PDV TY+++V+ CK G+V+EA + G+ N
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+ Y+SL+DG V++A+ + M ++G T + YN +I+ K + VDEA+ LF
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M+ + +G C + TY LL + K H ++A+ L + D+GI P
Sbjct: 493 MEEE-------------EG-CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
+ L GLC G++ A +++ +L G + MIN LCK G EA L
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADG 597
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ + G +I AL + G+ A KL+ + G
Sbjct: 598 ITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/491 (27%), Positives = 222/491 (45%), Gaps = 58/491 (11%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
++P+ V+ + + + I +F ++ KK Y N + +L+ L L V
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKK-YTHNLECYVSLVDVLALAKDVDRIR 172
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ F + + LI K+G L + RK++ ++P + YN +++ L
Sbjct: 173 FVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGL 232
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA---------------- 243
V A ++ M + RI P +VT+N++I G+C GQ ++A
Sbjct: 233 VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADK 292
Query: 244 -------------------IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
+AL EM K I + +++++ CKEGK+ E V
Sbjct: 293 ITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFEN 352
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M+++G KPNV YT L+DGY V A +L+ M G P+V +Y+ ++NGLCK
Sbjct: 353 MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 412
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGL--------------------CKSNIITYNS 384
V+EAL+ F + N++ ++SLIDGL C + YN+
Sbjct: 413 VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 472
Query: 385 LLDALCKSHHVDKAIALIKKI-RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
L+DA K VD+AIAL K++ ++G V TY IL+ G+ +E R + A ++ ++ K
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 532
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
G T + + GLC G A +L ++ G + DA E +I L + G +A
Sbjct: 533 GITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEA 591
Query: 504 EKLLREMMARG 514
KL + RG
Sbjct: 592 CKLADGITERG 602
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 225/470 (47%), Gaps = 22/470 (4%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
A L +++ PD T + LIN + Q A +++ +L+ P+ T+ LI
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
+G + AL+ + G + +++ +++ Q +L ++G V+P
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI--LPSVVTFNSLIYGFCIVGQLKEAIA 245
D +N II L K + A +L++ M R P VVTF S+++ + + G+++ A
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 341
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+ + MV + + P++ +YN L+ A+ G A +VL + + G+ P+VV+YT L++ Y
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ KAK + M + PNV +YN +I+ + EA+ +F +M+ I PN V
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 461
Query: 366 TFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKI 405
+ +L+ +S N YNS + + + ++KAIAL + +
Sbjct: 462 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
R + ++ D T+ IL+ G C + A ++++ P+T Y+ ++ K+G
Sbjct: 522 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 581
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
EA ++ ++M+ GC PD I + +++ A + KA +L EM A G+
Sbjct: 582 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 190/424 (44%), Gaps = 22/424 (5%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ +L++ + YS A+S ++ + PD T NI+I C Q + A +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 107 LAKILKKGYQ--PNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
+ +K + P+ +TFT+++ + G+++ + +VA+G N +SY L+
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
G + +L +L I+ + PDVV Y +++S + A ++ M R P+V
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
VT+N+LI + G L EA+ + +M I P+V + L+ A + K VL+
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
+G+ N Y S + Y +E+ KA + SM ++ V + ++ +I+G C++
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 345 VDEALNLFAEMD---------------CKNIVPNTVT-----FNSLIDGLCKSNIITYNS 384
EA++ EM+ C VT FN + C+ ++I Y S
Sbjct: 546 YPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTS 605
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
+L A S KA L ++ GI+PD + LM + G+ N ++ + K
Sbjct: 606 MLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKE 665
Query: 445 YPVT 448
P T
Sbjct: 666 IPFT 669
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 213/529 (40%), Gaps = 94/529 (17%)
Query: 28 HN-VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
HN VD +F + + S P + ++ + + + A++L + I P T
Sbjct: 156 HNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRST 215
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N LIN A V K+ G P+ +T ++ Q AL + + +
Sbjct: 216 YNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMK 275
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLV--KPDVVMYNTIIDSLCKDTL 204
+ ++ +I L K+GQ+ +L L + K +PDVV + +I+
Sbjct: 276 GAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE 335
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ + ++ MVA + P++V++N+L+ + + G A+++L ++ I PDV +Y
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
L++++ + + +A V +M K+ KPNVVTY +L+D Y + +A I M Q G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 325 VTPNVQS-----------------------------------YNTMINGLCKIKMVDEAL 349
+ PNV S YN+ I +++A+
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNII--------------------TYNSLLDAL 389
L+ M K + ++VTF LI G C+ + Y+S+L A
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
K V +A ++ +++ G +PDV Y ++ NA E
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY-------NASEK------------- 615
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
+ +A L +ME NG PD+I ++RA F KG
Sbjct: 616 ---------------WGKACELFLEMEANGIEPDSIACSALMRA-FNKG 648
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 24/348 (6%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+YN +I + V A L+ EM P T+++LI GQ + A+ L+D+M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
+ I P TYN L++A G +EA V M GV P++VT+ ++ Y +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI--VPNTVTFN 368
+KA M V P+ ++N +I L K+ +AL+LF M K P+ VTF
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 369 SLI---------------------DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
S++ +GL K NI++YN+L+ A A++++ I+
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
GI PDV +Y L++ + A+EV + + V TY +I+ G E
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
A+ + +ME +G P+ ++ T++ A + + +L +RG+
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 212/511 (41%), Gaps = 49/511 (9%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ ++F ++ P I+ + ++ + TA+S+ ++ GI PD+V+
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N Y Q A V + K+ +PN +T+ LI NG + A++ + G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQ-LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N +S TL+ C + + ++ +L + + + + YN+ I S + A
Sbjct: 456 IKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
LY M ++ VTF LI G C + + EAI+ L EM +I Y+ ++ A
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 574
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K+G+V EA ++ M G +P+V+ YTS++ Y + KA + M G+ P+
Sbjct: 575 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 634
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDC--KNIVPNTVTFNSLIDGLCKS--------- 377
+ + ++ K + N+F MD + +P T I C +
Sbjct: 635 SIACSALMRAFNK---GGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 691
Query: 378 ------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
+I N +L KS V+ + L KI G+ +++TY IL++ L
Sbjct: 692 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 751
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
G + EV++ + G + + Y +I+ F E I
Sbjct: 752 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS-------FGERSA-------------GI 791
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGLL 516
FE +IR E N K E L+ G L
Sbjct: 792 EFEPLIRQKLESLRN-KGEGLIPTFRHEGTL 821
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 225/470 (47%), Gaps = 22/470 (4%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
A L +++ PD T + LIN + Q A +++ +L+ P+ T+ LI
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
+G + AL+ + G + +++ +++ Q +L ++G V+P
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI--LPSVVTFNSLIYGFCIVGQLKEAIA 245
D +N II L K + A +L++ M R P VVTF S+++ + + G+++ A
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+ + MV + + P++ +YN L+ A+ G A +VL + + G+ P+VV+YT L++ Y
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ KAK + M + PNV +YN +I+ + EA+ +F +M+ I PN V
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVV 329
Query: 366 TFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKI 405
+ +L+ +S N YNS + + + ++KAIAL + +
Sbjct: 330 SVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
R + ++ D T+ IL+ G C + A ++++ P+T Y+ ++ K+G
Sbjct: 390 RKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQV 449
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
EA ++ ++M+ GC PD I + +++ A + KA +L EM A G+
Sbjct: 450 TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 22/442 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N + + + ++ P ++ +L++ + YS A+S ++ + PD T N
Sbjct: 96 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 155
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQ--PNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
I+I C Q + A + + +K + P+ +TFT+++ + G+++ + +V
Sbjct: 156 IIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
A+G N +SY L+ G + +L +L I+ + PDVV Y +++S +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A ++ M R P+VVT+N+LI + G L EA+ + +M I P+V + L+
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
A + K VL+ +G+ N Y S + Y +E+ KA + SM ++ V
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMD---------------CKNIVPNTVT----- 366
+ ++ +I+G C++ EA++ EM+ C VT
Sbjct: 396 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
FN + C+ ++I Y S+L A S KA L ++ GI+PD + LM +
Sbjct: 456 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 515
Query: 427 EGRLKNAQEVIQDLLTKGYPVT 448
G+ N ++ + K P T
Sbjct: 516 GGQPSNVFVLMDLMREKEIPFT 537
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 158/348 (45%), Gaps = 24/348 (6%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+YN +I + V A L+ EM P T+++LI GQ + A+ L+D+M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
+ I P TYN L++A G +EA V M GV P++VT+ ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI--VPNTVTFN 368
+KA M V P+ ++N +I L K+ +AL+LF M K P+ VTF
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 369 SLI---------------------DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
S++ +GL K NI++YN+L+ A A++++ I+
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
GI PDV +Y L++ + A+EV + + V TY +I+ G E
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
A+ + +ME +G P+ ++ T++ A + + +L +RG+
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 210/484 (43%), Gaps = 31/484 (6%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ ++F ++ P I+ + ++ + TA+S+ ++ GI PD+V+
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N Y Q A V + K+ +PN +T+ LI NG + A++ + G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQ-LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N +S TL+ C + + ++ +L + + + + YN+ I S + A
Sbjct: 324 IKPNVVSVCTLL-AACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
LY M ++ VTF LI G C + + EAI+ L EM +I Y+ ++ A
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 442
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K+G+V EA ++ M G +P+V+ YTS++ Y + KA + M G+ P+
Sbjct: 443 YSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPD 502
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDC--KNIVPNTVTFNSLIDGLCKS--------- 377
+ + ++ K + N+F MD + +P T I C +
Sbjct: 503 SIACSALMRAFNK---GGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAID 559
Query: 378 ------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
+I N +L KS V+ + L KI G+ +++TY IL++ L
Sbjct: 560 LIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLL 619
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN-GLCKEGLFDEALTL--LSKMEDNGCMP 482
G + EV++ + G + + Y +I+ G G+ E L L +M + +
Sbjct: 620 AVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEFEPLIRQKLGEMREECKIN 679
Query: 483 DAIT 486
D++T
Sbjct: 680 DSVT 683
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 216/462 (46%), Gaps = 15/462 (3%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F+ R+ T +GKI+ + + + A +L ++E GI I + +++ Y
Sbjct: 402 FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM 461
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
A V ++ + G+ P +T+ LI G++ AL+ + +G N +
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y +ING K+ + + + + +KPDV++YN II + C + A EM
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
+R P+ TF +I+G+ G ++ ++ + D M P V+T+N L++ ++ +++
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+A +L M GV N TYT +M GY V + KA + G+ ++ +Y ++
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
CK + AL + EM +NI N+ +N LIDG + V
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG---------------DVW 746
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+A LI++++ +G++PD+ TY + + G + A + I+++ G ++TYT +I
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
G + L ++AL+ +M+ G PD + ++ +L +
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 239/513 (46%), Gaps = 36/513 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N V+S F ++ + P EFG ++ + A ++ GITP
Sbjct: 293 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ Y + A S + K+ ++G + + +T++ ++ G G + A + D
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD- 207
LN YG +I C+ + L+R++E + + + +Y+T++D T+V D
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY---TMVADE 465
Query: 208 --AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
++ + P+VVT+ LI + VG++ +A+ + M + + ++ TY+++
Sbjct: 466 KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 266 VDAFCKEGKVKEATNVLAV---MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++ F K+K+ N AV M+K+G+KP+V+ Y +++ +C + +++A + M +
Sbjct: 526 INGFV---KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQK 582
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK------ 376
P +++ +I+G K + +L +F M VP TFN LI+GL +
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 377 --------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
+N TY ++ KA +++++G+ D+ TY L+
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
C+ GR+++A V +++ + P Y I+I+G + G EA L+ +M+ G P
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP 762
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D T+ + I A + G+ +A + + EM A G+
Sbjct: 763 DIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 174/374 (46%), Gaps = 35/374 (9%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+F RL TP ++ +G ++ K+ S A+ +S ++ G+ ++ T +++IN +
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFV 530
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+AF+V ++K+G +P+ I + +I C G + A+Q +
Sbjct: 531 KLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
++ +I+G K G R SL++ + P V +N +I+ L + + A + EM
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 216 VAMRILPSVVTFNSLIYGF-----------------------------------CIVGQL 240
+ + T+ ++ G+ C G++
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+ A+A+ EM +NI + + YNIL+D + + G V EA +++ M K+GVKP++ TYTS
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSF 770
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ ++N+A + M GV PN+++Y T+I G + + ++AL+ + EM I
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 361 VPNTVTFNSLIDGL 374
P+ ++ L+ L
Sbjct: 831 KPDKAVYHCLLTSL 844
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 1/331 (0%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ ++F +++ P +I + I+++ M + AI +++ P T +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ Y + + V + + G P TF LI GL Q++ A++ D + G
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N+ +Y ++ G +G T + + +++ + + D+ Y ++ + CK + A +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
EM A I + +N LI G+ G + EA L+ +M + + PD++TY + A K
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G + AT + M GVKPN+ TYT+L+ G+ S KA M G+ P+
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 332 YNTMINGLCKIKMVDEALNLFAEMD-CKNIV 361
Y+ ++ L + EA M CK +V
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTICKEMV 867
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 120/273 (43%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+D + + ++ P F I+ K ++ + + G P + T N
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LIN + Q+ A +L ++ G N T+T +++G G A ++ + +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE 688
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G ++ +Y L+ CK G+ +++L + +++ + + + +YN +ID + V +A
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+L +M + P + T+ S I G + A ++EM + P++ TY L+
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+ + ++A + M G+KP+ Y L+
Sbjct: 809 WARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 230/494 (46%), Gaps = 61/494 (12%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ PD +I + I SV+ + K G +P+ F +++ L + + A
Sbjct: 107 GLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL-VKEDIDIA 165
Query: 139 LQFHDH-VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
+F ++A G H + +YG L+ GL + +LL+ ++ V P+ V+YNT++
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+LCK+ V A +L SEM P+ VTFN LI +C +L +++ LL++ + P
Sbjct: 226 ALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
DV T +++ C EG+V EA VL + +G K +VV +L+ GYC + ++ A+
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC-- 375
M ++G PNV++YN +I G C + M+D AL+ F +M I N TFN+LI GL
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 376 --------------------KSNIITYNSLLDALCKSHH------------------VDK 397
+ I YN ++ K + VD+
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 461
Query: 398 AIALI-----------KKIRDQ----GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ LI K DQ G P + + L+ + G+++ + E+I D++T
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
+GY T+ +I G CK+ + + M + GC+PD ++ ++ L KG+ K
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 503 AEKLLREMMARGLL 516
A L M+ + ++
Sbjct: 582 AWLLFSRMVEKSIV 595
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 215/487 (44%), Gaps = 28/487 (5%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
V+S+ + + + P + F IL LVK + ++ +GI D+ T IL+
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMK 190
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
+I F +L + G PN + + TL+ LC NG+V A ++++
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARS----LMSEMKEP 246
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
N +++ LI+ C + S+ LL K PDVV +++ LC + V++A +
Sbjct: 247 NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL 306
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
+ + VV N+L+ G+C +G+++ A EM K P+V TYN+L+ +C
Sbjct: 307 ERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDV 366
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT--PNVQ 330
G + A + M ++ N T+ +L+ G + + IL M +
Sbjct: 367 GMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID 426
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------------- 377
YN +I G K ++AL +M+ + P V + + LC+
Sbjct: 427 PYNCVIYGFYKENRWEDALEFLLKME--KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQM 484
Query: 378 -------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+II + L+ + +++++ LI + +G P T+N ++ G C++ ++
Sbjct: 485 IGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKV 544
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
N + ++D+ +G +Y ++ LC +G +A L S+M + +PD + ++
Sbjct: 545 MNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL 604
Query: 491 IRALFEK 497
+ L +K
Sbjct: 605 MFCLSQK 611
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 163/352 (46%), Gaps = 12/352 (3%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ K++ L S A+ + ++E G D+V N L+ YC ++ A
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ +KGY PN T+ LI G C G + +AL + + N ++ TLI GL
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 167 MGQTRASLQLLR------KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
G+T L++L + G + P YN +I K+ DA +M ++
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEFLLKM--EKL 454
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
P V + + C G + + D+M+ + P + + L+ + + GK++E+
Sbjct: 455 FPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLE 514
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
++ M+ +G P T+ +++ G+C +V + M +RG P+ +SYN ++ LC
Sbjct: 515 LINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
+ +A LF+ M K+IVP+ ++SL+ L + I NS L + +S
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDIIQS 626
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 170/369 (46%), Gaps = 30/369 (8%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G PD+VT+ ++ C++ +++ A VL ++ KG + + + TL+KG C G+++ A
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+F + +G+ N +Y LI G C +G ++L ++ ++ + +NT+I
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 199 LCKDTLVTDAFNLYSEMV------AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
L D + M RI P +N +IYGF + ++A+ L +M
Sbjct: 398 LSIGGRTDDGLKILEMMQDSDTVHGARIDP----YNCVIYGFYKENRWEDALEFLLKM-- 451
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
+ + P + + + C++G + + M+ +G P+++ L+ Y ++ +
Sbjct: 452 EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
+ ++N M RG P ++N +I G CK V + +M + VP+T
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE------- 564
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL-- 430
+YN LL+ LC + KA L ++ ++ I PD ++ LM L ++ +
Sbjct: 565 --------SYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHV 616
Query: 431 -KNAQEVIQ 438
+ Q++IQ
Sbjct: 617 NSSLQDIIQ 625
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 147/345 (42%), Gaps = 61/345 (17%)
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNV 281
S T+ +L + C+ + LLDEM + PD + ++ F + +K +V
Sbjct: 75 SRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISV 134
Query: 282 LAVMMKQGVKP-----------------------------------NVVTYTSLMDGYCL 306
+ ++ K G+KP +V TY LM G L
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSL 194
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ + +L M GV PN YNT+++ LCK V A +L +EM PN VT
Sbjct: 195 TNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDVT 250
Query: 367 FNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIR 406
FN LI C +++T +++ LC V +A+ +++++
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
+G + DV N L+ G C G+++ AQ ++ KGY V TY ++I G C G+ D
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLD 370
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
AL + M+ + + TF T+IR L G K+L EMM
Sbjct: 371 SALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL-EMM 414
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 220/465 (47%), Gaps = 53/465 (11%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+ILI+C + ++ A + K+ + G P+ +L+K + ++ A +F +H++
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
++G HLN I C G +LL ++ ++PD+V + ID LCK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ ++ I V+ +S+I GFC VG+ +EAI L+ + P+++ Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFL 380
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
C G + A+ + + + G+ P+ V YT+++DGYC + +KA ++ + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
P++ + +I + + +A ++F M + + K +++TYN+L+
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGL---------------KLDVVTYNNLM 485
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
K+H ++K LI ++R GI PDV TYNIL+ + G + A E+I +L+ +G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 447 VTVRTYTIMINGLCKEGLFDEA-----------------------------------LTL 471
+ +T +I G K G F EA + L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+K+ D G PD + + T+I G+ KA +L+ M+ RG+L
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 200/393 (50%), Gaps = 23/393 (5%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
L++ I YC + +L + G +P+ + FT I LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + +S ++I+G CK+G+ +++L+ ++P++ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A ++ E+ + +LP V + ++I G+C +G+ +A ++ P + T IL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
A + G + +A +V M +G+K +VVTY +LM GY ++NK +++ M G++
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
P+V +YN +I+ + +DEA + +E+ + VP+T+ F +I G K
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
+++T ++LL CK+ ++KAI L K+ D G++PDV YN L+ G C
Sbjct: 571 WFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCS 630
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
G ++ A E+I ++ +G T+ ++ GL
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 194/392 (49%), Gaps = 27/392 (6%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I+ F + L K A S+ +L+ GI+ D V+++ +I+ +C + A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ +PN +++ + +C G + A + G + + Y T+I+G C
Sbjct: 364 IHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 167 MGQTRASLQLLRKIEGKLVK----PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
+G+T + Q G L+K P + +I + + ++DA +++ M +
Sbjct: 421 LGRTDKAFQYF----GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
VVT+N+L++G+ QL + L+DEM + I+PDV TYNIL+ + G + EA ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ ++++G P+ + +T ++ G+ + +A + M + P+V + + +++G CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
+ +++A+ V FN L+D K +++ YN+L+ C ++KA LI
Sbjct: 597 QRMEKAI---------------VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+ +G+ P+ T++ L+ GL E R N++
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL-EGKRFVNSE 672
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 117/236 (49%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D F LL+ P + ++ + + S A S+ ++ G+ D+VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
++ Y Q+ F ++ ++ G P+ T+ LI + + G + A + ++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ +++ +I G K G + + L + +KPDVV + ++ CK + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
L+++++ + P VV +N+LI+G+C VG +++A L+ MV + + P+ T++ LV
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++ D S+F + ++ + ++ K + L ++ GI+PD+ T N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI+ + I A ++++++++G+ P+T+ FT +I G G Q A ++
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++ L++G CK + ++ L K+ +KPDVV+YNT+I C + A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGF---CIVGQLKEAIALLDEMV 251
L MV +LP+ T ++L+ G V A LL+E++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 220/465 (47%), Gaps = 53/465 (11%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+ILI+C + ++ A + K+ + G P+ +L+K + ++ A +F +H++
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
++G HLN I C G +LL ++ ++PD+V + ID LCK +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ ++ I V+ +S+I GFC VG+ +EAI L+ + P+++ Y+ +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFL 380
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
C G + A+ + + + G+ P+ V YT+++DGYC + +KA ++ + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNP 440
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
P++ + +I + + +A ++F M + + K +++TYN+L+
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGL---------------KLDVVTYNNLM 485
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
K+H ++K LI ++R GI PDV TYNIL+ + G + A E+I +L+ +G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 447 VTVRTYTIMINGLCKEGLFDEA-----------------------------------LTL 471
+ +T +I G K G F EA + L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+K+ D G PD + + T+I G+ KA +L+ M+ RG+L
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 200/393 (50%), Gaps = 23/393 (5%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
L++ I YC + +L + G +P+ + FT I LC G ++ A +
Sbjct: 274 LSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLK 333
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G + +S ++I+G CK+G+ +++L+ ++P++ +Y++ + ++C +
Sbjct: 334 LFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDML 390
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A ++ E+ + +LP V + ++I G+C +G+ +A ++ P + T IL+
Sbjct: 391 RASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILI 450
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
A + G + +A +V M +G+K +VVTY +LM GY ++NK +++ M G++
Sbjct: 451 GACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGIS 510
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
P+V +YN +I+ + +DEA + +E+ + VP+T+ F +I G K
Sbjct: 511 PDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFIL 570
Query: 378 -----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
+++T ++LL CK+ ++KAI L K+ D G++PDV YN L+ G C
Sbjct: 571 WFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCS 630
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
G ++ A E+I ++ +G T+ ++ GL
Sbjct: 631 VGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 194/392 (49%), Gaps = 27/392 (6%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I+ F + L K A S+ +L+ GI+ D V+++ +I+ +C + A +
Sbjct: 304 PDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKL 363
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ +PN +++ + +C G + A + G + + Y T+I+G C
Sbjct: 364 IHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCN 420
Query: 167 MGQTRASLQLLRKIEGKLVK----PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
+G+T + Q G L+K P + +I + + ++DA +++ M +
Sbjct: 421 LGRTDKAFQYF----GALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKL 476
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
VVT+N+L++G+ QL + L+DEM + I+PDV TYNIL+ + G + EA ++
Sbjct: 477 DVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEII 536
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ ++++G P+ + +T ++ G+ + +A + M + P+V + + +++G CK
Sbjct: 537 SELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKA 596
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
+ +++A+ V FN L+D K +++ YN+L+ C ++KA LI
Sbjct: 597 QRMEKAI---------------VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+ +G+ P+ T++ L+ GL E R N++
Sbjct: 642 GLMVQRGMLPNESTHHALVLGL-EGKRFVNSE 672
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 117/236 (49%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D F LL+ P + ++ + + S A S+ ++ G+ D+VT N L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
++ Y Q+ F ++ ++ G P+ T+ LI + + G + A + ++ +GF
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ +++ +I G K G + + L + +KPDVV + ++ CK + A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
L+++++ + P VV +N+LI+G+C VG +++A L+ MV + + P+ T++ LV
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++ D S+F + ++ + ++ K + L ++ GI+PD+ T N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI+ + I A ++++++++G+ P+T+ FT +I G G Q A ++
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADL 577
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++ L++G CK + ++ L K+ +KPDVV+YNT+I C + A
Sbjct: 578 RMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGF---CIVGQLKEAIALLDEMV 251
L MV +LP+ T ++L+ G V A LL+E++
Sbjct: 638 CELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 207/414 (50%), Gaps = 28/414 (6%)
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR-ASLQLLRK 179
T+ L + LC G A Q + + + G N G L++ + G+ A+ LL+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
E V+ ++ N+++++L K V DA L+ E + + TFN LI G C VG+
Sbjct: 165 FE---VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV-KPNVVTYT 298
++A+ LL M PD+ TYN L+ FCK ++ +A+ + + V P+VVTYT
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
S++ GYC ++ +A +L+ M + G+ P ++N +++G K + A + +M
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 359 NIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKA 398
P+ VTF SLIDG C+ N TY+ L++ALC + + KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
L+ ++ + I P YN ++DG C+ G++ A +++++ K T+TI+I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG---ENYKAEKLLRE 509
C +G EA+++ KM GC PD IT +++ L + G E Y ++ R+
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 191/380 (50%), Gaps = 23/380 (6%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y L LCK G + Q+ ++ V P+ + ++ S + + A L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ + + NSL+ + ++++A+ L DE + D T+NIL+ C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV-TPNVQSYNT 334
++A +L VM G +P++VTY +L+ G+C +E+NKA + + V +P+V +Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------- 377
MI+G CK + EA +L +M I P VTFN L+DG K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 378 ---NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+++T+ SL+D C+ V + L +++ +G+ P+ TY+IL++ LC E RL A+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E++ L +K Y +I+G CK G +EA ++ +ME C PD ITF +I
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 495 FEKGENYKAEKLLREMMARG 514
KG ++A + +M+A G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIG 482
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 173/331 (52%), Gaps = 11/331 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ V+D + +F+ LR F ++ L + A+ L + G PDIVT
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGY--QPNTITFTTLIKGLCLNGQVQTALQFHDH 144
N LI +C ++ A S + K +K G P+ +T+T++I G C G+++ A D
Sbjct: 244 YNTLIQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVK----PDVVMYNTIIDSLC 200
++ G + +++ L++G K G+ + +I GK++ PDVV + ++ID C
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ V+ F L+ EM A + P+ T++ LI C +L +A LL ++ +K+I P +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
YN ++D FCK GKV EA ++ M K+ KP+ +T+T L+ G+C+ + +A I + M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
G +P+ + +++++ L K M EA +L
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 197/409 (48%), Gaps = 29/409 (7%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D VS NRLL E GK+ H++TA+ L E G + +N L
Sbjct: 131 SDGVSPNNRLLGFL-VSSFAEKGKL--------HFATALLL-QSFEVEGCC---MVVNSL 177
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+N ++ A + + L+ +T TF LI+GLC G+ + AL+ + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y TLI G CK + + ++ + ++ G + PDVV Y ++I CK + +A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L +M+ + I P+ VTFN L+ G+ G++ A + +M++ PDV T+ L+D +
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C+ G+V + + M +G+ PN TY+ L++ C + + KA+ +L + + + P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
YN +I+G CK V+EA + EM+ K P+ +TF LI G C
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG----------- 466
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+ +A+++ K+ G PD T + L+ L + G K A + Q
Sbjct: 467 ----RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 177/352 (50%), Gaps = 3/352 (0%)
Query: 55 ILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
+L +LVK+ A+ L L F D T NILI C + A +L +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
G +P+ +T+ TLI+G C + ++ A + F D + ++Y ++I+G CK G+ R
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+ LL + + P V +N ++D K + A + +M++ P VVTF SLI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G+C VGQ+ + L +EM + + P+ +TY+IL++A C E ++ +A +L + + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
Y ++DG+C +VN+A I+ M ++ P+ ++ +I G C + EA+++F
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
+M P+ +T +SL+ L K+ + L+ + + + + L K
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETK 527
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 159/332 (47%), Gaps = 16/332 (4%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++ YN + SLCK L A ++ M + + P+ L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
ALL + + + N L++ K +V++A + ++ + T+ L+ G
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C V + KA +L M G P++ +YNT+I G CK +++A +F ++ ++
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV---- 272
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
C +++TY S++ CK+ + +A +L+ + GI P T+N+L+DG
Sbjct: 273 ----------CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
+ G + A+E+ +++ G V T+T +I+G C+ G + L +M G P+A
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARGLL 516
T+ +I AL + KA +LL ++ ++ ++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDII 414
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 207/414 (50%), Gaps = 28/414 (6%)
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR-ASLQLLRK 179
T+ L + LC G A Q + + + G N G L++ + G+ A+ LL+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
E V+ ++ N+++++L K V DA L+ E + + TFN LI G C VG+
Sbjct: 165 FE---VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV-KPNVVTYT 298
++A+ LL M PD+ TYN L+ FCK ++ +A+ + + V P+VVTYT
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
S++ GYC ++ +A +L+ M + G+ P ++N +++G K + A + +M
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISF 341
Query: 359 NIVPNTVTFNSLIDGLCK--------------------SNIITYNSLLDALCKSHHVDKA 398
P+ VTF SLIDG C+ N TY+ L++ALC + + KA
Sbjct: 342 GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKA 401
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
L+ ++ + I P YN ++DG C+ G++ A +++++ K T+TI+I G
Sbjct: 402 RELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIG 461
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG---ENYKAEKLLRE 509
C +G EA+++ KM GC PD IT +++ L + G E Y ++ R+
Sbjct: 462 HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 191/380 (50%), Gaps = 23/380 (6%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y L LCK G + Q+ ++ V P+ + ++ S + + A L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ + + NSL+ + ++++A+ L DE + D T+NIL+ C GK
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV-TPNVQSYNT 334
++A +L VM G +P++VTY +L+ G+C +E+NKA + + V +P+V +Y +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------- 377
MI+G CK + EA +L +M I P VTFN L+DG K+
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 378 ---NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+++T+ SL+D C+ V + L +++ +G+ P+ TY+IL++ LC E RL A+
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E++ L +K Y +I+G CK G +EA ++ +ME C PD ITF +I
Sbjct: 403 ELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGH 462
Query: 495 FEKGENYKAEKLLREMMARG 514
KG ++A + +M+A G
Sbjct: 463 CMKGRMFEAVSIFHKMVAIG 482
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 173/331 (52%), Gaps = 11/331 (3%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ V+D + +F+ LR F ++ L + A+ L + G PDIVT
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGY--QPNTITFTTLIKGLCLNGQVQTALQFHDH 144
N LI +C ++ A S + K +K G P+ +T+T++I G C G+++ A D
Sbjct: 244 YNTLIQGFCKSNELNKA-SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVK----PDVVMYNTIIDSLC 200
++ G + +++ L++G K G+ + +I GK++ PDVV + ++ID C
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTA----EEIRGKMISFGCFPDVVTFTSLIDGYC 358
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ V+ F L+ EM A + P+ T++ LI C +L +A LL ++ +K+I P +
Sbjct: 359 RVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF 418
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
YN ++D FCK GKV EA ++ M K+ KP+ +T+T L+ G+C+ + +A I + M
Sbjct: 419 MYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKM 478
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
G +P+ + +++++ L K M EA +L
Sbjct: 479 VAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 197/409 (48%), Gaps = 29/409 (7%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D VS NRLL E GK+ H++TA+ L E G + +N L
Sbjct: 131 SDGVSPNNRLLGFL-VSSFAEKGKL--------HFATALLL-QSFEVEGCC---MVVNSL 177
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+N ++ A + + L+ +T TF LI+GLC G+ + AL+ + G
Sbjct: 178 LNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGC 237
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y TLI G CK + + ++ + ++ G + PDVV Y ++I CK + +A
Sbjct: 238 EPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREAS 297
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L +M+ + I P+ VTFN L+ G+ G++ A + +M++ PDV T+ L+D +
Sbjct: 298 SLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C+ G+V + + M +G+ PN TY+ L++ C + + KA+ +L + + + P
Sbjct: 358 CRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQP 417
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
YN +I+G CK V+EA + EM+ K P+ +TF LI G C
Sbjct: 418 FMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG----------- 466
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+ +A+++ K+ G PD T + L+ L + G K A + Q
Sbjct: 467 ----RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 177/352 (50%), Gaps = 3/352 (0%)
Query: 55 ILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
+L +LVK+ A+ L L F D T NILI C + A +L +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
G +P+ +T+ TLI+G C + ++ A + F D + ++Y ++I+G CK G+ R
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+ LL + + P V +N ++D K + A + +M++ P VVTF SLI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G+C VGQ+ + L +EM + + P+ +TY+IL++A C E ++ +A +L + + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
Y ++DG+C +VN+A I+ M ++ P+ ++ +I G C + EA+++F
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
+M P+ +T +SL+ L K+ + L+ + + + + L K
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLETK 527
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 159/332 (47%), Gaps = 16/332 (4%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++ YN + SLCK L A ++ M + + P+ L+ F G+L A
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
ALL + + + N L++ K +V++A + ++ + T+ L+ G
Sbjct: 159 ALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C V + KA +L M G P++ +YNT+I G CK +++A +F ++ ++
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV---- 272
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
C +++TY S++ CK+ + +A +L+ + GI P T+N+L+DG
Sbjct: 273 ----------CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
+ G + A+E+ +++ G V T+T +I+G C+ G + L +M G P+A
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNA 382
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARGLL 516
T+ +I AL + KA +LL ++ ++ ++
Sbjct: 383 FTYSILINALCNENRLLKARELLGQLASKDII 414
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 187/360 (51%), Gaps = 9/360 (2%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D V IF +++++ I + ++ + K A L ++E G+ PDI T N L
Sbjct: 185 DTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTL 244
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL----QFHDHVV 146
I+ YC ++ A SV ++ + G PN +T+ + I G G+++ A + D V
Sbjct: 245 ISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVT 304
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
A N ++Y TLI+G C+M +L+L +E + P VV YN+I+ LC+D +
Sbjct: 305 A-----NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A L +EM +I P +T N+LI +C + + A+ + +M+ + D+Y+Y L+
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
FCK +++ A L M+++G P TY+ L+DG+ ++ ++ +L +RG+
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
+V Y +I +CK++ VD A LF M+ K +V ++V F ++ ++ +T S L
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 219/481 (45%), Gaps = 34/481 (7%)
Query: 54 KILTSLVKMKHYSTAISLSHQLE--------------FTGIT--PDIVT--LNILINCYC 95
K++ L K KH+ TA L +L G++ P+ V+ + L+ Y
Sbjct: 85 KMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYA 144
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
I + V +I G +P+ T L+ L T + +V G N
Sbjct: 145 KAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIH 204
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
Y L++ K G + +LL ++E K V PD+ YNT+I CK ++ +A ++ M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ P++VT+NS I+GF G+++EA L E + ++ + TY L+D +C+ +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
EA + VM +G P VVTY S++ C + +A +L M + + P+ + NT+
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHV 395
IN CKI+ + A+ + +M I+ K ++ +Y +L+ CK +
Sbjct: 384 INAYCKIEDMVSAVKVKKKM---------------IESGLKLDMYSYKALIHGFCKVLEL 428
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+ A + + ++G P TY+ L+DG + + +++++ +G V Y +
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGL 488
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
I +CK D A L ME G + D++ F T+ A + G+ +A L M R L
Sbjct: 489 IRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRL 548
Query: 516 L 516
+
Sbjct: 549 M 549
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 200/423 (47%), Gaps = 16/423 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D + +F ++ P + +L SLVK + T + ++ G+ +I N+
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ A +L+++ +KG P+ T+ TLI C AL D + G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N ++Y + I+G + G+ R + +L R+I+ V + V Y T+ID C+ + +A
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEAL 327
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L M + P VVT+NS++ C G+++EA LL EM K I PD T N L++A+
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAY 387
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
CK + A V M++ G+K ++ +Y +L+ G+C V E+ AK L SM ++G +P
Sbjct: 388 CKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+Y+ +++G DE L E + + GLC +++ Y L+ +
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKR--------------GLC-ADVALYRGLIRRI 492
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
CK VD A L + + +G+ D + + G++ A + + + V +
Sbjct: 493 CKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNL 552
Query: 450 RTY 452
+ Y
Sbjct: 553 KLY 555
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 202/439 (46%), Gaps = 16/439 (3%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F ++ K + +I + Q+ G+ P + +L+N Q + + + K++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
K G N + L+ +G + A + + +G + +Y TLI+ CK
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+L + ++E V P++V YN+ I ++ + +A L+ E + + + VT+ +LI
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLI 314
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G+C + + EA+ L + M ++ +P V TYN ++ C++G+++EA +L M + ++
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P+ +T +L++ YC + ++ A + M + G+ ++ SY +I+G CK+ ++ A
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEE 434
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
M K P T++ L+DG N D+ L+++ +G+
Sbjct: 435 LFSMIEKGFSPGYATYSWLVDGFYNQN---------------KQDEITKLLEEFEKRGLC 479
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
DV Y L+ +C+ ++ A+ + + + KG +T M + G EA L
Sbjct: 480 ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Query: 472 LSKMEDNGCMPDAITFETI 490
M + M + +++I
Sbjct: 540 FDVMYNRRLMVNLKLYKSI 558
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
R ++ T + + ++ +M A+ L +E G +P +VT N ++ C
Sbjct: 297 REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
+I A +L ++ K +P+ IT TLI C + +A++ ++ G L+ SY
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
LI+G CK+ + + + L + K P Y+ ++D + L E
Sbjct: 417 ALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKR 476
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
+ V + LI C + Q+ A L + M K + D + + A+ + GKV EA
Sbjct: 477 GLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEA 536
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+ + VM + + N+ Y S+ Y
Sbjct: 537 SALFDVMYNRRLMVNLKLYKSISASYA 563
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 115/249 (46%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++++D+ + + + +P ++ + IL L + A L ++ I PD +T
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N LIN YC + SA V K+++ G + + ++ LI G C +++ A + ++
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+GF +Y L++G + +LL + E + + DV +Y +I +CK V
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A L+ M ++ V F ++ Y + G++ EA AL D M + + ++ Y +
Sbjct: 500 YAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSIS 559
Query: 267 DAFCKEGKV 275
++ + V
Sbjct: 560 ASYAGDNDV 568
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 223/495 (45%), Gaps = 62/495 (12%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
P + N L+N C ++ A ++ + +G+ P+ +TFTTLI G C +++ A +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI-EGKLVKPDVVM----YNTII 196
D + G N ++ LI G KM +L++++ E + D M + ++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 197 DSLCKDTLVTDAFNL---------------YSEMV-----------AMRIL--------- 221
DS+C++ D F + Y M+ A RI+
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
P ++N++I+G C G A LL+E P YTY +L+++ CKE +A NV
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
L +M+++ Y + G C++ + +L SM Q P+ + NT+INGLCK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 342 IKMVDEALNLFAE-MDCKNIVPNTVTFNSLIDGL---------------------CKSNI 379
+ VD+A+ + + M K P+ VT N+++ GL K +
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
+ YN+++ L K H D+A+++ ++ + D TY I++DGLC ++ A++ D
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDD 579
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
++ Y + GLC+ G +A L + D+G +P+ + + T+I G
Sbjct: 580 VIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGL 639
Query: 500 NYKAEKLLREMMARG 514
+A ++L EM G
Sbjct: 640 KREAYQILEEMRKNG 654
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 214/525 (40%), Gaps = 100/525 (19%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +++ L + A L + G PD+VT LI YC ++ A V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH------------------------ 142
++ G +PN++T + LI G V+T +
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 143 DHVVAQGFHLN----------------QISYGTLINGLCKMGQTRASLQLLRKIEGKLVK 186
D + +G+ + + +YG +I+ LC+ + + +++ ++ K +K
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTF------------------- 227
P YN II LCKD A+ L E PS T+
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 228 ----------------NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
N + G C++ E + +L M+ + PD YT N +++ CK
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 272 EGKVKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS-MPQRGVTPNV 329
G+V +A VL MM + P+ VT ++M G +A +LN MP+ + P V
Sbjct: 460 MGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGV 519
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+YN +I GL K+ DEA+++F +++ ++ ++ T+ +IDGLC +N
Sbjct: 520 VAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTN----------- 568
Query: 390 CKSHHVDKAIALIKKIRDQGIQP----DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ + KK D I P D Y + GLC+ G L +A + DL G
Sbjct: 569 --------KVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGA 620
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
V Y +I + GL EA +L +M NG PDA+T+ +
Sbjct: 621 IPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 202/460 (43%), Gaps = 66/460 (14%)
Query: 102 SAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLI 161
A +L + +GY+P+++ +++I LC G+ A + +A GF ++ + +I
Sbjct: 73 EALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII 132
Query: 162 NGLCKMGQTRASLQLLRKIEG--KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
L ++L ++ ++ G K P + YN +++ LC V DA L +M
Sbjct: 133 ARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRG 192
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
LP VVTF +LI G+C + +L+ A + DEM I P+ T ++L+ F K V+
Sbjct: 193 HLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGR 252
Query: 280 NVLAVM-----------MKQGVKPNVV-----------------------------TYTS 299
++ + MK N+V Y
Sbjct: 253 KLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGH 312
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
++D C + A I+ M +G+ P SYN +I+GLCK A L E
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 360 IVPNTVTFNSLIDGLCKS-------NIIT-------------YNSLLDALCKSHHVDKAI 399
P+ T+ L++ LCK N++ YN L LC + + +
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL 432
Query: 400 ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY--PVTVRTYTIMIN 457
++ + +PD T N +++GLC+ GR+ +A +V+ D++T + P V T+M
Sbjct: 433 NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMC- 491
Query: 458 GLCKEGLFDEALTLLSK-MEDNGCMPDAITFETIIRALFE 496
GL +G +EAL +L++ M +N P + + +IR LF+
Sbjct: 492 GLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 2/203 (0%)
Query: 30 VDDVVSIFNRLLRMS-PTPPIIEFGKILTSLVKMKHYSTAIS-LSHQLEFTGITPDIVTL 87
VDD + + + ++ P + ++ L+ A+ L+ + I P +V
Sbjct: 463 VDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAY 522
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N +I + A SV ++ K ++ T+ +I GLC+ +V A +F D V+
Sbjct: 523 NAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIW 582
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ Y + GLC+ G + L + P+VV YNT+I + L +
Sbjct: 583 PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKRE 642
Query: 208 AFNLYSEMVAMRILPSVVTFNSL 230
A+ + EM P VT+ L
Sbjct: 643 AYQILEEMRKNGQAPDAVTWRIL 665
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
++A IL+ + RG P+ + +++I+ LC DEA F +P+ T N +
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
I + ++ S + L H + I K+ P + YN LM+ LC R+
Sbjct: 132 I-----ARLLYSRSPVSTLGVIHRL---IGFKKE-----FVPSLTNYNRLMNQLCTIYRV 178
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
+A +++ D+ +G+ V T+T +I G C+ + A + +M G P+++T +
Sbjct: 179 IDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVL 238
Query: 491 IRALFEKGENYKAEKLLREMM 511
I + + KL++E+
Sbjct: 239 IGGFLKMRDVETGRKLMKELW 259
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 218/462 (47%), Gaps = 20/462 (4%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
+ + +L K A+ + +++ G +P IVT N LI+ Y + A + +
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ +KG +P+ T+TTL+ G G+V++A+ + + G N ++ I G+
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
+++ +I + PD+V +NT++ ++ + ++ ++ EM +P TFN+
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
LI + G ++A+ + M+ + PD+ TYN ++ A + G +++ VLA M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
KPN +TY SL+ Y E+ + + + P T++ K ++ EA
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 350 NLFAEMDCKNIVPNTVTFNSLID------GLCKSN--------------IITYNSLLDAL 389
F+E+ + P+ T NS++ + K+N + TYNSL+
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+S K+ ++++I +GI+PD+ +YN ++ C R+++A + ++ G V
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
TY I + +F+EA+ ++ M +GC P+ T+ +I+
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 228/486 (46%), Gaps = 18/486 (3%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKM-KHYSTAISLSHQLEFTGITPDIVTLNIL 90
+ V++F ++ P +I + IL KM ++ SL +++ GI PD T N L
Sbjct: 226 EAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTL 285
Query: 91 INCYCHQAQI-TSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
I C C + + A V ++ G+ + +T+ L+ + + + A++ + +V G
Sbjct: 286 ITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F + ++Y +LI+ + G +++L ++ K KPDV Y T++ + V A
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+++ EM P++ TFN+ I + G+ E + + DE+ ++PD+ T+N L+ F
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
+ G E + V M + G P T+ +L+ Y +A + M GVTP++
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
+YNT++ L + M +++ + AEM+ DG CK N +TY SLL A
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEME---------------DGRCKPNELTYCSLLHAY 569
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+ +L +++ I+P L+ + L A+ +L +G+ +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
T M++ + + +A +L M++ G P T+ +++ + K+E++LRE
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 510 MMARGL 515
++A+G+
Sbjct: 690 ILAKGI 695
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 213/439 (48%), Gaps = 28/439 (6%)
Query: 103 AFSVLAKILKKGYQP--NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTL 160
AF K +K YQ + +I L G+V +A + + GF L+ SY +L
Sbjct: 157 AFDWFMK--QKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL 214
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK-DTLVTDAFNLYSEMVAMR 219
I+ G+ R ++ + +K+E KP ++ YN I++ K T +L +M +
Sbjct: 215 ISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 220 ILPSVVTFNSLIYGFCIVGQL-KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
I P T+N+LI C G L +EA + +EM + D TYN L+D + K + KEA
Sbjct: 275 IAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
VL M+ G P++VTY SL+ Y +++A + N M ++G P+V +Y T+++G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID------------------GLC--KSN 378
+ V+ A+++F EM PN TFN+ I +C +
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
I+T+N+LL ++ + + K+++ G P+ T+N L+ G + A V +
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
+L G + TY ++ L + G+++++ +L++MED C P+ +T+ +++ A + G
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA-YANG 572
Query: 499 ENYKAEKLLREMMARGLLE 517
+ L E + G++E
Sbjct: 573 KEIGLMHSLAEEVYSGVIE 591
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 191/411 (46%), Gaps = 15/411 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+ +SIF + P I F + ++ + + ++ G++PDIVT N
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + + V ++ + G+ P TF TLI G + A+ + ++ G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +Y T++ L + G S ++L ++E KP+ + Y +++ + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L E+ + I P V +L+ L EA E+ + +PD+ T N +V +
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
+ V +A VL M ++G P++ TY SLM + ++ K++ IL + +G+ P++
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
SYNT+I C+ + +A +F+EM IVP+ +ITYN+ + +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD---------------VITYNTFIGSY 744
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
++AI +++ + G +P+ TYN ++DG C+ R A+ ++DL
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+A K +D D I++ L +EGR+ +A + L G+ + V +YT +I
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY-KAEKLLREMMARGL 515
+ G + EA+ + KME++GC P IT+ I+ + G + K L+ +M + G+
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 221/473 (46%), Gaps = 61/473 (12%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
L +++ +C++ ++ +A SV+ ++ + G+ + +I C N + AL F D ++
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKML 345
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G +N + ++ CKM +L+ ++ + D V YN D+L K V
Sbjct: 346 GKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVE 405
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+AF L EM I+P V+ + +LI G+C+ G++ +A+ L+DEM+ ++PD+ TYN+LV
Sbjct: 406 EAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLV 465
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR--- 323
+ G +E + M +G KPN VT + +++G C +V +A+ +S+ Q+
Sbjct: 466 SGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE 525
Query: 324 ------------GVTPNVQS-------------YNTMINGLCKIKMVDEALNLFAEMDCK 358
G++ Y + LC +++A ++ +M
Sbjct: 526 NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 359 NIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDALCKSHHVDKA 398
+ P +I CK N + TY ++ C+ + + KA
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA 645
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCE-----------EGRL--KNAQEVIQDLLTKGY 445
+L + ++ +GI+PDV TY +L+D + +G + + A EV+++ G
Sbjct: 646 ESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
+ V YT++I+ CK ++A L +M D+G PD + + T+I + F KG
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 202/431 (46%), Gaps = 33/431 (7%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
IL KM A+ + I D V N+ + ++ AF +L ++ +G
Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRG 418
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P+ I +TTLI G CL G+V AL D ++ G + I+Y L++GL + G L
Sbjct: 419 IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVL 478
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM------------------- 215
++ +++ + KP+ V + II+ LC V +A + +S +
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAG 538
Query: 216 VAMRILPSVVTFN---------SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
++ + + V L + CI G L++A +L +M + P ++
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMI 598
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
AFCK V+EA + M+++G+ P++ TYT ++ YC ++E+ KA+ + M QRG+
Sbjct: 599 GAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIK 658
Query: 327 PNVQSYNTMINGLCKIKMV-DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P+V +Y +++ K+ E ++ E+ + F++ GL +++ Y L
Sbjct: 659 PDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGL---DVVCYTVL 715
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+D CK +++++A L ++ D G++PD+ Y L+ +G + A ++ + L+K Y
Sbjct: 716 IDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTE-LSKKY 774
Query: 446 PVTVRTYTIMI 456
+ ++ +
Sbjct: 775 NIPSESFEAAV 785
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 217/488 (44%), Gaps = 42/488 (8%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLA 108
+ EFGKI ++L QL+ G+ + T I++ C + + A +L
Sbjct: 191 MTEFGKI----------GMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLI 240
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTA----LQFHDHVVAQGFHLNQISYGTLINGL 164
+ + + T I GLC+ G+ + A L+ D G L + G ++ G
Sbjct: 241 E------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAV-LGMVVRGF 293
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
C + +A+ ++ ++E DV +ID CK+ + +A +M+ + +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
V + ++ +C + EA+ E NI D YN+ DA K G+V+EA +L
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M +G+ P+V+ YT+L+DGYCL +V A +++ M G++P++ +YN +++GL +
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT----YNSLLDALCKSHHVDKAIA 400
+E L ++ M + PN VT + +I+GLC + + + S L+ C + +
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKA----S 529
Query: 401 LIKKIRDQGIQPD-----VR--------TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+K + G+ VR Y L LC EG L+ A +V++ +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
MI CK EA L M + G +PD T+ +I E KAE L
Sbjct: 590 GRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLF 649
Query: 508 REMMARGL 515
+M RG+
Sbjct: 650 EDMKQRGI 657
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 235/564 (41%), Gaps = 109/564 (19%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILK 112
G ++ + V + + A + Q + DI N L+N +I ++ ++ +
Sbjct: 150 GALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQ 209
Query: 113 KGYQPNTITFTTLIKGLCLNGQVQTA--LQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
G N T+ ++K LC G ++ A L + V Y T INGLC G+T
Sbjct: 210 LGLCANEYTYAIVVKALCRKGNLEEAAMLLIENESV--------FGYKTFINGLCVTGET 261
Query: 171 RASLQL--------------LRKIEGKLVKP------------------------DVVMY 192
++ L LR + G +V+ DV
Sbjct: 262 EKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYAC 321
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
+ID CK+ + +A +M+ + + V + ++ +C + EA+ E
Sbjct: 322 LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRD 381
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
NI D YN+ DA K G+V+EA +L M +G+ P+V+ YT+L+DGYCL +V
Sbjct: 382 MNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD 441
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
A +++ M G++P++ +YN +++GL + +E L ++ M + PN VT + +I+
Sbjct: 442 ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIE 501
Query: 373 GLC----------------------KSNII--------------------------TYNS 384
GLC K++ + Y
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIK 561
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
L +LC +++KA ++KK+ ++P ++ C+ ++ AQ + ++ +G
Sbjct: 562 LFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERG 621
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE-------- 496
+ TYTIMI+ C+ +A +L M+ G PD +T+ ++ +
Sbjct: 622 LIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHET 681
Query: 497 ---KGE--NYKAEKLLREMMARGL 515
+GE KA ++LRE A G+
Sbjct: 682 CSVQGEVGKRKASEVLREFSAAGI 705
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 190/438 (43%), Gaps = 48/438 (10%)
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNG---QVQTALQFHDHVVAQGFHLNQISYGT 159
A S L ++ + G PN + TL++ L G ++ + L +GF +
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMD----- 127
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
LI + + + + +L ++ G LVK V + + +A ++ + +
Sbjct: 128 LIEVIGEQAEEKKRSFVLIRVSGALVKAYVSL-----------GMFDEATDVLFQSKRLD 176
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
+ + N L+ G++ + L ++ + + YTY I+V A C++G ++EA
Sbjct: 177 CVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAA 236
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG--VTPNVQSYNTMI- 336
+L +V Y + ++G C+ E KA ++ + R ++++ M+
Sbjct: 237 MLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVV 290
Query: 337 NGLCKIKMVDEALNLFAEMD------------------CKNI-VPNTVTF-NSLIDGLCK 376
G C + A ++ EM+ CKN+ +P + F + ++ K
Sbjct: 291 RGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLK 350
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
N + + +L CK +A+ K+ RD I D YN+ D L + GR++ A E+
Sbjct: 351 VNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFEL 410
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
+Q++ +G V YT +I+G C +G +AL L+ +M NG PD IT+ ++ L
Sbjct: 411 LQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLAR 470
Query: 497 KGENYKAEKLLREMMARG 514
G + ++ M A G
Sbjct: 471 NGHEEEVLEIYERMKAEG 488
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
++NV + +F+ ++ P + + ++ + ++ A SL ++ GI PD+VT
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 87 LNILINCYCH-QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
+L++ Y + SV ++ K+ F+
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS---------------------- 701
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
A G L+ + Y LI+ CKM + +L ++ ++PD+V Y T+I S + +
Sbjct: 702 -AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Query: 206 TDAFNLYSEMVAMRILPS 223
A L +E+ +PS
Sbjct: 761 DMAVTLVTELSKKYNIPS 778
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 179/333 (53%), Gaps = 7/333 (2%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLA 108
+ F ++++ + + AIS+ + ++ G+ P++VT N +I+ C + + F +A
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGME--FKQVA 324
Query: 109 KIL----KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
K + G QP+ ITF +L+ G + A D + + + SY TL++ +
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
CK GQ + ++L ++ K + P+VV Y+T+ID K +A NL+ EM + I
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
V++N+L+ + VG+ +EA+ +L EM + I DV TYN L+ + K+GK E V
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M ++ V PN++TY++L+DGY +A I G+ +V Y+ +I+ LCK +
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
V A++L EM + I PN VT+NS+ID +S
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 190/374 (50%), Gaps = 18/374 (4%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
+ +I L G+V A + + A G+ ++ LI+ + G ++ + ++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 183 KLVKPDVVMYNTIIDSLCKDTL-VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLK 241
++P++V YN +ID+ K + + EM + P +TFNSL+ C G L
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLW 355
Query: 242 EAIA-LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
EA L DEM + I DV++YN L+DA CK G++ A +LA M + + PNVV+Y+++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+DG+ ++A + M G+ + SYNT+++ K+ +EAL++ EM I
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
K +++TYN+LL K D+ + +++ + + P++ TY+ L
Sbjct: 476 ---------------KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+DG + G K A E+ ++ + G V Y+ +I+ LCK GL A++L+ +M G
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 481 MPDAITFETIIRAL 494
P+ +T+ +II A
Sbjct: 581 SPNVVTYNSIIDAF 594
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 184/378 (48%), Gaps = 27/378 (7%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
V F+ + R P I F +L + + A +L ++ I D+ + N L++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C Q+ AF +LA++ K PN ++++T+I G G+ AL + G L
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+++SY TL++ K+G++ +L +LR++ +K DVV YN ++ K + ++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
+EM +LP+++T+++LI G+ G KEA+ + E + + DV Y+ L+DA CK
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN--SMP--------- 321
G V A +++ M K+G+ PNVVTY S++D + + ++++ N S+P
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Query: 322 -------------QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
Q N ++ G+ ++ + L +F +M I PN VTF+
Sbjct: 623 TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCI---LEVFRKMHQLEIKPNVVTFS 679
Query: 369 SLIDGLCKSNIITYNSLL 386
++++ + N S+L
Sbjct: 680 AILNACSRCNSFEDASML 697
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 175/346 (50%), Gaps = 21/346 (6%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+ + +I +L + VT A ++ A +V F++LI + G +EAI++ + M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 251 VTKNINPDVYTYNILVDAFCKEG-KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+ P++ TYN ++DA K G + K+ M + GV+P+ +T+ SL+
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
A+ + + M R + +V SYNT+++ +CK +D A + A+M K I+PN V++++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 370 LIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+IDG K+ + ++YN+LL K ++A+ +++++ G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
I+ DV TYN L+ G ++G+ ++V ++ + + TY+ +I+G K GL+ EA+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 470 TLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ + + G D + + +I AL + G A L+ EM G+
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 135/293 (46%), Gaps = 20/293 (6%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ +++F + + + + +L+ K+ A+ + ++ GI D+VT N L
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ Y Q + V ++ ++ PN +T++TLI G G + A++ + G
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ + Y LI+ LCK G +++ L+ ++ + + P+VV YN+IID+ + + + +
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
YS ++ S ++ + G I L ++ T++ N C
Sbjct: 606 -YSNGGSLPFSSSALSALTETEG-------NRVIQLFGQLTTESNNRTTKD--------C 649
Query: 271 KEGKVKEATNVLAVMMKQG---VKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
+EG ++E + +L V K +KPNVVT++++++ + A +L +
Sbjct: 650 EEG-MQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIAL----IKKIRDQGIQPDVRTYNILMDGLCEEGR 429
LC S+ TY ++ L + DKA+ +K+ R + Q + + ++ L G+
Sbjct: 193 LCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLAS--AMISTLGRYGK 248
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+ A+ + + GY TV ++ +I+ + GL +EA+++ + M++ G P+ +T+
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNA 308
Query: 490 IIRALFEKGENYK-AEKLLREMMARGL 515
+I A + G +K K EM G+
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGV 335
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 222/478 (46%), Gaps = 28/478 (5%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ V++ + +F + P +I + ++ S A L +++ TG TPDIV
Sbjct: 409 LGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVI 468
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N+L AF L + +G +P +T +I+GL G++ A F++ +
Sbjct: 469 YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT-LV 205
H ++ + +++ G C G + + ++E L K +Y T+ SLC + +
Sbjct: 529 ----HKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKS---VYFTLFTSLCAEKDYI 581
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+ A +L M + + P + LI +C V +++A + +VTK I PD++TY I+
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
++ +C+ + K+A + M ++ VKP+VVTY+ L++ E++ + M V
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS---DPELDMKR----EMEAFDV 694
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL----------- 374
P+V Y MIN C + + + LF +M + IVP+ VT+ L+
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKA 754
Query: 375 --CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
K ++ Y L+D CK + +A + ++ + G+ PD Y L+ C+ G LK
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
A+ + ++ G V YT +I G C+ G +A+ L+ +M + G P + +
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 231/540 (42%), Gaps = 71/540 (13%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ V +FN++L+ + IL +M ++S A L + T I+ D V N
Sbjct: 341 NIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYN 400
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+ + ++ A + ++ KG P+ I +TTLI G CL G+ A +
Sbjct: 401 VAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + + Y L GL G + + + L+ +E + VKP V +N +I+ L + A
Sbjct: 461 GKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKA 520
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA----------------------- 245
Y + S S++ GFC G L A
Sbjct: 521 EAFYESLEH----KSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA 576
Query: 246 ----------LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
LLD M + P+ Y L+ A+C+ V++A +++ + + P++
Sbjct: 577 EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF 636
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
TYT +++ YC ++E +A + M +R V P+V +Y+ ++N D L++ EM
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREM 689
Query: 356 DCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDALCKSHHV 395
+ +++P+ V + +I+ C N ++TY LL + +
Sbjct: 690 EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-- 747
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
L ++++ ++PDV Y +L+D C+ G L A+ + ++ G YT +
Sbjct: 748 -----LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
I CK G EA + +M ++G PD + + +I G KA KL++EM+ +G+
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/517 (22%), Positives = 220/517 (42%), Gaps = 54/517 (10%)
Query: 31 DDVVSIFNR-LLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
D+ + IF R + P I +++ ++ + ++E G+ D T +
Sbjct: 163 DEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVL 222
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++ +L+++L + + + I+GLCLN A +
Sbjct: 223 VVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDAN 282
Query: 150 FHLNQ----ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+++ I+Y ++ GLC + + ++ +E + PDV +Y+ II+ K+ +
Sbjct: 283 ILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNI 342
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A +++++M+ R + V +S++ +C +G EA L E NI+ D YN+
Sbjct: 343 PKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVA 402
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
DA K GKV+EA + M +G+ P+V+ YT+L+ G CL + + A ++ M G
Sbjct: 403 FDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK 462
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN----------------- 368
TP++ YN + GL + EA M+ + + P VT N
Sbjct: 463 TPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA 522
Query: 369 --------------SLIDGLCKSNII-----------------TYNSLLDALC-KSHHVD 396
S++ G C + + Y +L +LC + ++
Sbjct: 523 FYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYIS 582
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
KA L+ ++ G++P+ Y L+ C ++ A+E + L+TK + TYTIMI
Sbjct: 583 KAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
N C+ +A L M+ PD +T+ ++ +
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/510 (23%), Positives = 222/510 (43%), Gaps = 37/510 (7%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI- 89
+++ + +RLL P + + + L + A L L I D L I
Sbjct: 234 EELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIA 293
Query: 90 ---LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
++ C++ +I A SV+ + K G P+ ++ +I+G N + A+ + ++
Sbjct: 294 YRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKML 353
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+ +N + +++ C+MG + L ++ + D V YN D+L K V
Sbjct: 354 KKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVE 413
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A L+ EM I P V+ + +LI G C+ G+ +A L+ EM PD+ YN+L
Sbjct: 414 EAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
G +EA L +M +GVKP VT+ +++G E++KA+ S+ +
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK--- 530
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF----------------NSL 370
+ ++ +M+ G C +D A F ++ +P +V F L
Sbjct: 531 -SRENDASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDL 587
Query: 371 IDGLCKSNI----ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
+D + K + Y L+ A C+ ++V KA + + + I PD+ TY I+++ C
Sbjct: 588 LDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCR 647
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
K A + +D+ + V TY++++N D L + +ME +PD +
Sbjct: 648 LNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVY 700
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGLL 516
+ +I + K L ++M R ++
Sbjct: 701 YTIMINRYCHLNDLKKVYALFKDMKRREIV 730
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 166/425 (39%), Gaps = 83/425 (19%)
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCK-------DTL---------------VTDAFN 210
+L L++IEG + P V Y T+I +C DT V D
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL-LDEMVTKNINPDVYTYNILVDAF 269
EM +L V+ +L+ + + EAI + + PD+ N L+
Sbjct: 134 AIGEMEQSLVLLIRVS-TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRM 192
Query: 270 CKEGKV-----------------------------------KEATNVLAVMMKQGVKPNV 294
G+ +E +L+ ++ +
Sbjct: 193 IASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPC 252
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ----SYNTMINGLCKIKMVDEALN 350
V Y + ++G CL + A ++L + + + +Y ++ GLC +++A +
Sbjct: 253 VFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAES 312
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKS--------------------NIITYNSLLDALC 390
+ +M+ I P+ ++++I+G K+ N + +S+L C
Sbjct: 313 VVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYC 372
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
+ + +A L K+ R+ I D YN+ D L + G+++ A E+ +++ KG V
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVI 432
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
YT +I G C +G +A L+ +M+ G PD + + + L G +A + L+ M
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 511 MARGL 515
RG+
Sbjct: 493 ENRGV 497
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 211/418 (50%), Gaps = 26/418 (6%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
T L+ L G+ A + G + ISY TL+ + Q + ++ ++E
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
K D + +N +I++ + + DA +M + + P+ T+N+LI G+ I G+ +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 243 AIALLDEMVTK---NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
+ LLD M+ + ++ P++ T+N+LV A+CK+ KV+EA V+ M + GV+P+ VTY +
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 300 LMDGYCLVSEVNKAKY--ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
+ Y E +A+ + + + PN ++ ++ G C+ V + L M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 358 KNIVPNTVTFNSLIDGL--------------------CKSNIITYNSLLDALCKSHHVDK 397
+ N V FNSLI+G K+++ITY+++++A + +++K
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEK 348
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A + K++ G++PD Y+IL G K A+E+++ L+ + P V +T +I+
Sbjct: 349 AAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV-IFTTVIS 407
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G C G D+A+ + +KM G P+ TFET++ E + +KAE++L+ M G+
Sbjct: 408 GWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 465
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 202/456 (44%), Gaps = 64/456 (14%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ ++F L P +I + +L ++ K Y + S+ ++E +G D + N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG-- 149
N + + A L K+ + G P T T+ TLIKG + G+ + + + D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 150 -FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI------------- 195
N ++ L+ CK + + ++++K+E V+PD V YNTI
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 196 ------------------------IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+ C++ V D M MR+ ++V FNSLI
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 232 YGFCIV---GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
GF V + E + L+ E N+ DV TY+ +++A+ G +++A V M+K
Sbjct: 303 NGFVEVMDRDGIDEVLTLMKEC---NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKA 359
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
GVKP+ Y+ L GY E KA+ +L ++ PNV + T+I+G C +D+A
Sbjct: 360 GVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDA 418
Query: 349 LNLFAEMDCK-NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
+ +F +M CK + PN TF +L+ G + KA +++ +R
Sbjct: 419 MRVFNKM-CKFGVSPNIKTFETLMWG---------------YLEVKQPWKAEEVLQMMRG 462
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
G++P+ T+ +L + G + + I L K
Sbjct: 463 CGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 498
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 151/316 (47%), Gaps = 3/316 (0%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I F ++ + K K A + ++E G+ PD VT N + CY + + A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 107 LAK--ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
+ + ++K+ +PN T ++ G C G+V+ L+F + N + + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
++ ++L ++ VK DV+ Y+T++++ + A ++ EMV + P
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
++ L G+ + K+A LL+ ++ ++ P+V + ++ +C G + +A V
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M K GV PN+ T+ +LM GY V + KA+ +L M GV P ++ + +
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 345 VDEALNLFAEMDCKNI 360
DE+ + CK+I
Sbjct: 485 TDESNKAINALKCKDI 500
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 224/475 (47%), Gaps = 19/475 (4%)
Query: 43 MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITS 102
+S +P ++ +++ +L + K S A+S+ +Q + P T N +I + Q
Sbjct: 158 VSVSPAVL--SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEK 215
Query: 103 AFSVLAKILKKGY-QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLI 161
V ++ +G P+TIT++ LI G+ +A++ D + + Y TL+
Sbjct: 216 VHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 162 NGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL 221
K+G+ +L L +++ P V Y +I L K V +A+ Y +M+ +
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA-FCKEGKVKEATN 280
P VV N+L+ VG+++E + EM P V +YN ++ A F + V E ++
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
M V P+ TY+ L+DGYC + V KA +L M ++G P +Y ++IN L
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIA 400
K K + A LF E+ N +S + Y ++ K + +A+
Sbjct: 456 KAKRYEAANELFKELK-----ENFGNVSSRV----------YAVMIKHFGKCGKLSEAVD 500
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
L ++++QG PDV YN LM G+ + G + A +++ + G + ++ I++NG
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFA 560
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ G+ A+ + ++ +G PD +T+ T++ G +A +++REM +G
Sbjct: 561 RTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 29/429 (6%)
Query: 112 KKGYQPNTITFTTLIKGL---CLNGQVQTALQFHDHVVAQGF-HLNQISYGTLINGLCKM 167
++ +Q + T+ TLI+ L L G++ +Q VV + ++ L+ L +
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQ---EVVRNTYVSVSPAVLSELVKALGRA 175
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV-AMRILPSVVT 226
+L + + +G+ KP YN++I L ++ +Y+EM P +T
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT 235
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+++LI + +G+ AI L DEM + P Y L+ + K GKV++A ++ M
Sbjct: 236 YSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK 295
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G P V TYT L+ G V++A M + G+TP+V N ++N L K+ V+
Sbjct: 296 RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI---------------------ITYNSL 385
E N+F+EM P V++N++I L +S TY+ L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+D CK++ V+KA+ L++++ ++G P Y L++ L + R + A E+ ++L
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
V+ R Y +MI K G EA+ L ++M++ G PD + ++ + + G +A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 506 LLREMMARG 514
LLR+M G
Sbjct: 536 LLRKMEENG 544
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 164/349 (46%), Gaps = 1/349 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ V+ + +F + R +P + + +++ L K A + G+TPD+V
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVF 340
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLN-GQVQTALQFHDHV 145
LN L+N ++ +V +++ P +++ T+IK L + V + D +
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
A ++ +Y LI+G CK + +L LL +++ K P Y ++I++L K
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A L+ E+ S + +I F G+L EA+ L +EM + PDVY YN L
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ K G + EA ++L M + G + ++ ++ +++G+ +A + ++ G+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
P+ +YNT++ M +EA + EM K + +T++S++D +
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 172/414 (41%), Gaps = 51/414 (12%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I + +++S K+ +AI L +++ + P L+ Y ++ A +
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ + G P T+T LIKGL G+V A F+ ++ G + + L+N L K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 167 MGQTR------ASLQLLR------------------------------KIEGKLVKPDVV 190
+G+ + + + R K++ V P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
Y+ +ID CK V A L EM P + SLI + + A L E+
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
N Y +++ F K GK+ EA ++ M QG P+V Y +LM G +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
N+A +L M + G ++ S+N ++NG + + A+ +F + I P
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP-------- 582
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
DG +TYN+LL + ++A ++++++D+G + D TY+ ++D +
Sbjct: 583 -DG------VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 200/419 (47%), Gaps = 48/419 (11%)
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA-QGFHLNQISYGTLINGLC 165
++KI Y P+ ++ LN QTAL F D + F N SY +L+ LC
Sbjct: 17 ISKISYPFYTPSHVS-----SLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLC 71
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMY---NTIIDSL-----CKDTLVTDAFNLYSEMVA 217
++I ++ K ++M N++ D+L C+ D+F +
Sbjct: 72 S-----------QEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDSFE-----IK 115
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
++ P +N+L+ G ++E L EM+ ++PD+YT+N LV+ +CK G V E
Sbjct: 116 YKLTPKC--YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE 173
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
A + +++ G P+ TYTS + G+C EV+ A + M Q G N SY +I
Sbjct: 174 AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY 233
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
GL + K +DEAL+L +M N PN + TY L+DALC S +
Sbjct: 234 GLFEAKKIDEALSLLVKMKDDNCCPN---------------VRTYTVLIDALCGSGQKSE 278
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A+ L K++ + GI+PD Y +L+ C L A +++ +L G V TY +I
Sbjct: 279 AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
G CK+ + +A+ LLSKM + +PD IT+ T+I G A +LL M GL+
Sbjct: 339 GFCKKNV-HKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 186/398 (46%), Gaps = 40/398 (10%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKH----YSTAISLSHQLEFTGITPDIVTLN 88
V S+F+ L + P + F ++ + KH Y++ ++L E P I L
Sbjct: 30 VSSLFS--LNLDPQTAL-SFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILM 86
Query: 89 I----------LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
I + +C + +F + K+ K Y L+ L G V+
Sbjct: 87 IKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYN-------NLLSSLARFGLVEEM 139
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ + ++ + ++ TL+NG CK+G + Q + + PD Y + I
Sbjct: 140 KRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITG 199
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
C+ V AF ++ EM + V++ LIYG ++ EA++LL +M N P+
Sbjct: 200 HCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPN 259
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V TY +L+DA C G+ EA N+ M + G+KP+ YT L+ +C +++A +L
Sbjct: 260 VRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLE 319
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
M + G+ PNV +YN +I G CK K V +A+ L ++M +N+VP+ +T+N+LI G C S
Sbjct: 320 HMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
++D A L+ + + G+ P+ RT
Sbjct: 379 ---------------NLDSAYRLLSLMEESGLVPNQRT 401
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 1/267 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+++ ++ +L +P I F ++ K+ + A L G PD T
Sbjct: 136 VEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTS 195
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
I +C + ++ +AF V ++ + G N +++T LI GL ++ AL +
Sbjct: 196 FITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDN 255
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
N +Y LI+ LC GQ ++ L +++ +KPD MY +I S C + +A
Sbjct: 256 CCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L M+ ++P+V+T+N+LI GFC + +A+ LL +M+ +N+ PD+ TYN L+
Sbjct: 316 GLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVT 296
C G + A +L++M + G+ PN T
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPNQRT 401
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 222/456 (48%), Gaps = 27/456 (5%)
Query: 56 LTSLVK----MKHYSTAISLSHQLEFT----GITPDIVTLNILINCYCHQAQITSAFSVL 107
L SLVK H+ A+ L L + + D + I + ++Q + A +L
Sbjct: 139 LVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLL 198
Query: 108 AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM 167
KI + Y + +TT++ G+ + A+ + + G ++Y +++ KM
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 168 GQT-RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G++ R L +L ++ K +K D +T++ + ++ L+ +A ++E+ + P VT
Sbjct: 259 GRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVT 318
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N+L+ F G EA+++L EM + D TYN LV A+ + G KEA V+ +M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
K+GV PN +TYT+++D Y + ++A + SM + G PN +YN +++ L K +
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSN 438
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAI-ALIKKI 405
E + + +M PN T+N+++ ALC + +DK + + +++
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTML----------------ALCGNKGMDKFVNRVFREM 482
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+ G +PD T+N L+ G +A ++ ++ G+ V TY ++N L ++G +
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
++S M+ G P ++ +++ + KG NY
Sbjct: 543 RSGENVISDMKSKGFKPTETSYSLMLQC-YAKGGNY 577
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 203/446 (45%), Gaps = 17/446 (3%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +L K Y+ A+S+ ++E D VT N L+ Y A V
Sbjct: 314 PGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV 373
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ + KKG PN IT+TT+I G+ AL+ + G N +Y +++ L K
Sbjct: 374 IEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN-LYSEMVAMRILPSVV 225
++ +++L ++ P+ +NT++ +LC + + N ++ EM + P
Sbjct: 434 KSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
TFN+LI + G +A + EM N V TYN L++A ++G + NV++ M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+G KP +Y+ ++ Y + I N + + + P+ T+
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTL---------- 602
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
L A C+ + + F K +++ +NS+L +++ D+A +++ I
Sbjct: 603 -----LLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESI 657
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
R+ G+ PD+ TYN LMD G A+E+++ L + +Y +I G C+ GL
Sbjct: 658 REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLM 717
Query: 466 DEALTLLSKMEDNGCMPDAITFETII 491
EA+ +LS+M + G P T+ T +
Sbjct: 718 QEAVRMLSEMTERGIRPCIFTYNTFV 743
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/493 (20%), Positives = 213/493 (43%), Gaps = 53/493 (10%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQ-ITSAFSVLAKILKK 113
IL + + Y AI L +++ G +P +VT N++++ + + VL ++ K
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G + + T +T++ G ++ A +F + + G+ ++Y L+ K G +
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
L +L+++E D V YN ++ + + +A + M ++P+ +T+ ++I
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
+ G+ EA+ L M P+ TYN ++ K+ + E +L M G PN
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 294 VVTYTSLMDGYCLVSEVNK-AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
T+ +++ C ++K + M G P+ ++NT+I+ + +A ++
Sbjct: 456 RATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
EM FN+ + TYN+LL+AL + +I ++ +G +P
Sbjct: 515 GEM-------TRAGFNAC--------VTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 413 DVRTYNILMDGLCE----------EGRLKNAQEVIQDLLTK------------------- 443
+Y++++ + E R+K Q +L +
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF 619
Query: 444 ------GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
GY + + M++ + ++D+A +L + ++G PD +T+ +++ +
Sbjct: 620 TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 498 GENYKAEKLLREM 510
GE +KAE++L+ +
Sbjct: 680 GECWKAEEILKTL 692
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 182/419 (43%), Gaps = 49/419 (11%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ + +F + P + +L+ L K + I + ++ G +P+ T N +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ ++ V ++ G++P+ TF TLI G A + + + GF
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD-------- 202
+ +Y L+N L + G R+ ++ ++ K KP Y+ ++ K
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIER 582
Query: 203 ------------------TLVTDAFNLYSEMVAMRIL---------PSVVTFNSLIYGFC 235
TL+ F + + R P +V FNS++ F
Sbjct: 583 IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFT 642
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
+A +L+ + ++PD+ TYN L+D + + G+ +A +L + K +KP++V
Sbjct: 643 RNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 702
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM---VDEALNLF 352
+Y +++ G+C + +A +L+ M +RG+ P + +YNT ++G + M +++ +
Sbjct: 703 SYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECM 762
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
A+ DC+ PN +TF ++DG C++ Y+ +D + K D DQ IQ
Sbjct: 763 AKNDCR---PNELTFKMVVDGYCRAG--KYSEAMDFVSKIKTFDPCFD------DQSIQ 810
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 84/480 (17%), Positives = 210/480 (43%), Gaps = 50/480 (10%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ +S+ + S + + +++ + V+ A + + G+ P+ +T +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ Y + A + + + G PNT T+ ++ L + ++ + + G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N+ ++ T++ G + ++ R+++ +PD +NT+I + + DA +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
Y EM V T+N+L+ G + ++ +M +K P +Y++++ + K
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 272 ----------EGKVKE-------------------------ATNVLAVMMKQGVKPNVVT 296
E ++KE + + K G KP++V
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
+ S++ + + ++A+ IL S+ + G++P++ +YN++++ + +A + ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+ P+ V++N++I G C+ ++ +A+ ++ ++ ++GI+P + T
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLM---------------QEAVRMLSEMTERGIRPCIFT 738
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
YN + G G ++VI+ + T+ ++++G C+ G + EA+ +SK++
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
S+ + A +L+ +P + +V++Y T+++ + ++A++LF M K + P+
Sbjct: 189 SQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM--KEMGPSPT-- 244
Query: 368 NSLIDGLCKSNIITYNSLLDALCK-SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
++TYN +LD K K + ++ ++R +G++ D T + ++
Sbjct: 245 -----------LVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
EG L+ A+E +L + GY TY ++ K G++ EAL++L +ME+N C D++T
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGLL 516
+ ++ A G + +A ++ M +G++
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI----RDQGIQPDVRTYNILMD 422
F+S+ L +++++ SL+ L S H ++A+ L + + ++ D + I +
Sbjct: 127 FDSVKSELLRTDLV---SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVR 183
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
L E + A +++ + + Y + VR YT +++ + G +++A+ L +M++ G P
Sbjct: 184 ILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSP 243
Query: 483 DAITFETIIRALFEKGENY-KAEKLLREMMARGL 515
+T+ I+ + G ++ K +L EM ++GL
Sbjct: 244 TLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGL 277
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 224/468 (47%), Gaps = 67/468 (14%)
Query: 74 QLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
+++ G ++ T N++I +C ++++ A SV ++LK G PN ++F +I G C G
Sbjct: 208 EMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTG 267
Query: 134 QVQTALQFHDHVVAQGFHL---NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV- 189
++ ALQ + + N ++Y ++ING CK G+ L L +I G +VK V
Sbjct: 268 DMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGR----LDLAERIRGDMVKSGVD 323
Query: 190 ---VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
Y ++D+ + +A L EM + ++ + V +NS++Y + G ++ A+++
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT--------------------------- 279
L +M +KN+ D +T I+V C+ G VKEA
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 280 --------NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
+L M+ QG+ + +++ +L+DGY ++ +A I + M + T N+
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
YN+++NGL K M A + M+ K+IV TYN+LL+ K
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEIKDIV-------------------TYNTLLNESLK 544
Query: 392 SHHVDKAIALIKKIRDQGIQPDVR--TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+ +V++A ++ K++ Q + V T+NI+++ LC+ G + A+EV++ ++ +G
Sbjct: 545 TGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDS 604
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
TY +I K ++ + L + G P + +I+R L ++
Sbjct: 605 ITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 224/452 (49%), Gaps = 33/452 (7%)
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKK----GYQPNTITFTTLIKGLCLNGQVQTALQF 141
L+I+ N + + S VL+ +++ G P+ F +L++ NG Q A +
Sbjct: 113 ALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEV 170
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
+ A+GF ++ + + L + + ++ ++++ +V +N +I S CK
Sbjct: 171 IEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCK 230
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE--MVTKN-INPD 258
++ + +A +++ M+ + P+VV+FN +I G C G ++ A+ LL + M++ N ++P+
Sbjct: 231 ESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPN 290
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
TYN +++ FCK G++ A + M+K GV N TY +L+D Y ++A + +
Sbjct: 291 AVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCD 350
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS- 377
M +G+ N YN+++ L ++ A+++ +M+ KN+ + T ++ GLC++
Sbjct: 351 EMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
Query: 378 -------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
+I+ +N+L+ + + A ++ + QG+ D ++
Sbjct: 411 YVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFG 470
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+DG +EG+L+ A E+ ++ + Y ++NGL K G+ A +++ ME
Sbjct: 471 TLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAME-- 528
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+ D +T+ T++ + G +A+ +L +M
Sbjct: 529 --IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 20/263 (7%)
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
+PDV+ + LV A + G + A V+ +G +V + M V+E+++
Sbjct: 147 SPDVF--DSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWK 204
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+ M G NV ++N +I CK + EAL++F M + PN V+FN +IDG C
Sbjct: 205 VYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC 264
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKI---RDQGIQPDVRTYNILMDGLCEEGRLKN 432
K+ + + A+ L+ K+ + P+ TYN +++G C+ GRL
Sbjct: 265 KTGDMRF---------------ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDL 309
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A+ + D++ G RTY +++ + G DEAL L +M G + + + + +I+
Sbjct: 310 AERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVY 369
Query: 493 ALFEKGENYKAEKLLREMMARGL 515
LF +G+ A +LR+M ++ +
Sbjct: 370 WLFMEGDIEGAMSVLRDMNSKNM 392
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 23/312 (7%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
F+SL+ G + A ++++ + V+ N + ++ V M
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
G NV T+ ++ +C S++ +A + M + GV PNV S+N MI+G CK +
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 347 EALNLFAEMDCKN---IVPNTVTFNSLIDGLCKS--------------------NIITYN 383
AL L +M + + PN VT+NS+I+G CK+ N TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+L+DA ++ D+A+ L ++ +G+ + YN ++ L EG ++ A V++D+ +K
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
+ T I++ GLC+ G EA+ ++ + + D + T++ + A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 504 EKLLREMMARGL 515
+++L M+ +GL
Sbjct: 451 DQILGSMLVQGL 462
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 159/301 (52%), Gaps = 1/301 (0%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
E GITP+I T N+L+ C + I SA+ VL +I G PN +T+TT++ G G +
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
++A + + ++ +G++ + +Y L++G CK+G+ + ++ +E ++P+ V Y +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
I +LCK+ +A N++ EM+ +P +I C ++ EA L +M+ N
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
PD + L+ CKEG+V EA + K G P+++TY +L+ G C E+ +A
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGR 421
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+ + M +R PN +YN +I GL K V E + + EM PN TF L +GL
Sbjct: 422 LWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQ 481
Query: 376 K 376
K
Sbjct: 482 K 482
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 201/415 (48%), Gaps = 20/415 (4%)
Query: 97 QAQITSAFSVLAKILKKGYQP---NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
+A+ L L+ Y P F L++ L G+ +++++ + G +
Sbjct: 95 RARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS 154
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
S TL+N L + + + + + + P++ N ++ +LCK + A+ +
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVL 214
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
E+ +M ++P++VT+ +++ G+ G ++ A +L+EM+ + PD TY +L+D +CK
Sbjct: 215 DEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKL 274
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G+ EA V+ M K ++PN VTY ++ C + +A+ + + M +R P+
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
+I+ LC+ VDEA L+ +M N +P+ ++LI LCK +T
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT----------- 383
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+A L + ++G P + TYN L+ G+CE+G L A + D+ + TY
Sbjct: 384 ----EARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTY 438
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
++I GL K G E + +L +M + GC P+ TF + L + G+ A K++
Sbjct: 439 NVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
++++ + + + M P ++ + IL V +A + ++ G PD T
Sbjct: 205 NDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTY 264
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+L++ YC + + A +V+ + K +PN +T+ +I+ LC + A D ++
Sbjct: 265 TVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE 324
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ F + +I+ LC+ + + L RK+ PD + +T+I LCK+ VT+
Sbjct: 325 RSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTE 384
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L+ E I PS++T+N+LI G C G+L EA L D+M + P+ +TYN+L++
Sbjct: 385 ARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIE 443
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
K G VKE VL M++ G PN T+ L +G
Sbjct: 444 GLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 16/221 (7%)
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA-EM 355
+ L+ Y L + I +P GV +V+S NT++N L + + D +F
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 356 DCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
+ I PN I T N L+ ALCK + ++ A ++ +I G+ P++
Sbjct: 183 ESFGITPN---------------IFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLV 227
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
TY ++ G G +++A+ V++++L +G+ TYT++++G CK G F EA T++ M
Sbjct: 228 TYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM 287
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
E N P+ +T+ +IRAL ++ ++ +A + EM+ R +
Sbjct: 288 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFM 328
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 194/401 (48%), Gaps = 16/401 (3%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+PN +T +I L G + L+ D + +QG + SY LIN + G+ SL+
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF-NLYSEMVAMRILPSVVTFNSLIYGF 234
LL +++ + + P ++ YNT+I++ + L + L++EM I P +VT+N+L+
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
I G EA + M I PD+ TY+ LV+ F K ++++ ++L M G P++
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+Y L++ Y + +A + + M G TPN +Y+ ++N + D+ LF E
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M N P+ T YN L++ + + + + L + ++ I+PD+
Sbjct: 378 MKSSNTDPDAAT---------------YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
TY ++ + G ++A++++Q + + + YT +I + L++EAL +
Sbjct: 423 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
M + G P TF +++ + G ++E +L ++ G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 213/495 (43%), Gaps = 35/495 (7%)
Query: 32 DVVSIFNRLLRMSPTPPII-------------EFGKILTSLVKMKHYSTAISLSHQLEFT 78
DV S+ N+L + P I +F + + ++ L ++
Sbjct: 75 DVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQ 134
Query: 79 -GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
P+ I+I+ + + V ++ +G + ++T LI NG+ +T
Sbjct: 135 IWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYET 194
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMG-QTRASLQLLRKIEGKLVKPDVVMYNTII 196
+L+ D + + + ++Y T+IN + G L L ++ + ++PD+V YNT++
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 254
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
+ L +A ++ M I+P + T++ L+ F + +L++ LL EM +
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
PD+ +YN+L++A+ K G +KEA V M G PN TY+ L++ + + + +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
M P+ +YN +I + E + LF +M +NI P+ T+ +I K
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 377 SNI--------------------ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+ Y +++A ++ ++A+ + + G P + T
Sbjct: 435 GGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
++ L+ G +K ++ ++ L+ G P T+ I + G F+EA+ ME
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 477 DNGCMPDAITFETII 491
+ C PD T E ++
Sbjct: 555 KSRCDPDERTLEAVL 569
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 178/347 (51%), Gaps = 17/347 (4%)
Query: 168 GQTRASLQLLRKIEGKLV-KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + SL+L + ++ ++ KP+ +Y +I L ++ L+ ++ EM + + SV +
Sbjct: 119 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS 178
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT-NVLAVM 285
+ +LI + G+ + ++ LLD M + I+P + TYN +++A + G E + A M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+G++P++VTY +L+ + ++A+ + +M G+ P++ +Y+ ++ K++ +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
++ +L EM +P+ I +YN LL+A KS + +A+ + ++
Sbjct: 299 EKVCDLLGEMASGGSLPD---------------ITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+ G P+ TY++L++ + GR + +++ ++ + TY I+I + G F
Sbjct: 344 QAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
E +TL M + PD T+E II A + G + A K+L+ M A
Sbjct: 404 KEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 219/485 (45%), Gaps = 18/485 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D + +F+ + + + + ++ + + Y T++ L +++ I+P I+T N
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 90 LIN-CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+IN C + A++ +G QP+ +T+ TL+ + G A +
Sbjct: 217 VINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG 276
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +Y L+ K+ + LL ++ PD+ YN ++++ K + +A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++ +M A P+ T++ L+ F G+ + L EM + N +PD TYNIL++
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
F + G KE + M+++ ++P++ TY ++ A+ IL M + P+
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
++Y +I + + +EAL V FN++ + +I T++SLL +
Sbjct: 457 SKAYTGVIEAFGQAALYEEAL---------------VAFNTMHEVGSNPSIETFHSLLYS 501
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
+ V ++ A++ ++ D GI + T+N ++ + G+ + A + D+
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY-KAEKLL 507
RT +++ L DE +M+ + +P + + ++ A++ K E + +LL
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCY-CMMLAVYGKTERWDDVNELL 620
Query: 508 REMMA 512
EM++
Sbjct: 621 EEMLS 625
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/473 (19%), Positives = 199/473 (42%), Gaps = 26/473 (5%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ +F + P + + ++ + K++ L ++ G PDI + N+L
Sbjct: 264 DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVL 323
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ Y I A V ++ G PN T++ L+ +G+ Q + +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNT 383
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ +Y LI + G + + L + + ++PD+ Y II + K L DA
Sbjct: 384 DPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARK 443
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
+ M A I+PS + +I F +EA+ + M NP + T++ L+ +F
Sbjct: 444 ILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 503
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
+ G VKE+ +L+ ++ G+ N T+ + ++ Y + +A M + P+ +
Sbjct: 504 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 563
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF----------------NSLIDGL 374
+ +++ ++VDE F EM +I+P+ + + N L++ +
Sbjct: 564 TLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALI-----KKIRDQGIQPDVRTYNILMDGLCEEGR 429
+ + + ++ + K + D + I K+ +G +R YN L+D L G+
Sbjct: 624 LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQ 683
Query: 430 LKNAQEVIQDLLTKG-YPVTVR----TYTIMINGLCKEGLFDEALTLLSKMED 477
+ A V+ + +G +P R +++ ++ + + G++ L+ + D
Sbjct: 684 KERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDIND 736
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 221/457 (48%), Gaps = 46/457 (10%)
Query: 87 LNILIN-CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
+N+LI H+AQ + F LA+ G++P+ I++TTL+ + + Q + V
Sbjct: 52 MNVLIERGRPHEAQ--TVFKTLAET---GHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS---LCKD 202
G L+ I + +IN + G ++Q L K++ + P YNT+I K
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
++ +L E + + P++ TFN L+ +C +++EA ++ +M + PD TY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 263 NILVDAFCKEGKV--KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
N + + ++G+ E+ V ++MK+ KPN T ++ GYC V + M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT-----FNSLIDGL- 374
+ V N+ +N++ING ++ MD I T+T FN ++ +
Sbjct: 287 KEMRVEANLVVFNSLINGFVEV------------MDRDGIDEVTLTLLLMSFNEEVELVG 334
Query: 375 ----------------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
K+++ITY+++++A + +++KA + K++ G++PD Y+
Sbjct: 335 NQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 394
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
IL G K A+E+++ L+ + P V +T +I+G C G D+A+ + +KM
Sbjct: 395 ILAKGYVRAKEPKKAEELLETLIVESRP-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 453
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G P+ TFET++ E + +KAE++L+ M G+
Sbjct: 454 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 203/478 (42%), Gaps = 83/478 (17%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ ++F L P +I + +L ++ K Y + S+ ++E +G D + N +I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG-- 149
N + + A L K+ + G P T T+ TLIKG + G+ + + + D ++ +G
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 150 -FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI------------- 195
N ++ L+ CK + + ++++K+E V+PD V YNTI
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 196 ------------------------IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+ C++ V D M MR+ ++V FNSLI
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 232 YGFC-------------------------IVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
GF +VG K + +L M N+ DV TY+ ++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+A+ G +++A V M+K GVKP+ Y+ L GY E KA+ +L ++
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-R 421
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGLCKSNIITYNSL 385
PNV + T+I+G C +D+A+ +F +M CK + PN TF +L+ G
Sbjct: 422 PNVVIFTTVISGWCSNGSMDDAMRVFNKM-CKFGVSPNIKTFETLMWG------------ 468
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+ KA +++ +R G++P+ T+ +L + G + + I L K
Sbjct: 469 ---YLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 523
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 188/449 (41%), Gaps = 84/449 (18%)
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
T L+ L G+ A + G + ISY TL+ + Q + ++ ++E
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
K D + +N +I++ + + DA +M + + P+ T+N+LI G+ I G+ +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 243 AIALLDEMVTK---NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
+ LLD M+ + ++ P++ T+N+LV A+CK+ KV+EA V+ M + GV+P+ VTY +
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 300 LMDGYCLVSEVNKAKY--ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
+ Y E +A+ + + + PN ++ ++ G C+ V + L M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 358 KNIVPNTVTFNSLIDGLC------------------------------------------ 375
+ N V FNSLI+G
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 376 ---KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL------------ 420
K+++ITY+++++A + +++KA + K++ G++PD Y+IL
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 421 ----------------------MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
+ G C G + +A V + G ++T+ ++ G
Sbjct: 409 AEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWG 468
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITF 487
+ +A +L M G P+ TF
Sbjct: 469 YLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 154/341 (45%), Gaps = 28/341 (8%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I F ++ + K K A + ++E G+ PD VT N + CY + + A S
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 107 LAK--ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
+ + ++K+ +PN T ++ G C G+V+ L+F + N + + +LING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 165 CKM-------------------------GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
++ G + +Q+L ++ VK DV+ Y+T++++
Sbjct: 306 VEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAW 365
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
+ A ++ EMV + P ++ L G+ + K+A LL+ ++ ++ P+V
Sbjct: 366 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNV 424
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
+ ++ +C G + +A V M K GV PN+ T+ +LM GY V + KA+ +L
Sbjct: 425 VIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQM 484
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
M GV P ++ + + DE+ + CK+I
Sbjct: 485 MRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 525
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 110/221 (49%), Gaps = 18/221 (8%)
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
V + T LM+ ++A+ + ++ + G P++ SY T++ + K ++ +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
E++ +++ FN++I+ A +S +++ A+ + K+++ G+ P
Sbjct: 105 EVEQSGTKLDSIFFNAVIN---------------AFSESGNMEDAVQALLKMKELGLNPT 149
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKG---YPVTVRTYTIMINGLCKEGLFDEALT 470
TYN L+ G G+ + + E++ +L +G +RT+ +++ CK+ +EA
Sbjct: 150 TSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
++ KME+ G PD +T+ TI +KGE +AE + E M
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 213/441 (48%), Gaps = 21/441 (4%)
Query: 75 LEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ 134
L + PD++ N+LI+ Y + Q A S+ ++L+ Y P T+ LIK C+ G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 135 VQTA----LQFHDHVVAQGFHLNQISYGTLINGLCKM-GQTRASLQLLRKIEGKLVKPDV 189
++ A ++ +H V+ + Y I GL K G T ++ + ++++ KP
Sbjct: 228 IERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
YN +I+ K + ++ LY EM + + P++ T+ +L+ F G ++A + ++
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+ + PDVY YN L++++ + G A + ++M G +P+ +Y ++D Y
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ A+ + M + G+ P ++S+ +++ K + V + + EM + P+T NS
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
+++ L L + ++K +A ++ + D+ TYNIL++ + G
Sbjct: 467 MLN------------LYGRLGQFTKMEKILA---EMENGPCTADISTYNILINIYGKAGF 511
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
L+ +E+ +L K + V T+T I ++ L+ + L + +M D+GC PD T +
Sbjct: 512 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 571
Query: 490 IIRALFEKGENYKAEKLLREM 510
++ A + + + +LR M
Sbjct: 572 LLSACSSEEQVEQVTSVLRTM 592
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 26/300 (8%)
Query: 242 EAIALLDEMVTK--NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
++I L+ E + + + PDV +N+L+DA+ ++ + KEA ++ +++ P TY
Sbjct: 158 DSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 217
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTP---NVQSYNTMINGLCKIKM-VDEALNLFAEM 355
L+ YC+ + +A+ +L M V+P V YN I GL K K +EA+++F M
Sbjct: 218 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 277
Query: 356 DCKNIVPNTVTFNSLID--------------------GLCKSNIITYNSLLDALCKSHHV 395
P T T+N +I+ CK NI TY +L++A +
Sbjct: 278 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 337
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+KA + +++++ G++PDV YN LM+ G A E+ + G +Y IM
Sbjct: 338 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 397
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++ + GL +A + +M+ G P + ++ A + + K E +++EM G+
Sbjct: 398 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 457
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 160/392 (40%), Gaps = 51/392 (13%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
AI + +++ P T N++IN Y ++ ++ + ++ +PN T+T L+
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
G + A + + + G ++P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDG-----------------------------------LEP 354
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
DV +YN +++S + A ++S M M P ++N ++ + G +A A+
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+EM I P + ++ +L+ A+ K V + ++ M + GV+P+ S+++ Y +
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 474
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+ K + IL M T ++ +YN +IN K ++ LF E+ KN P+ VT+
Sbjct: 475 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 534
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
S I + + K + + +++ D G PD T +L+ E
Sbjct: 535 TSRIGAYSRKKLYV---------------KCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 579
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+++ V++ + KG V+ +M L
Sbjct: 580 EQVEQVTSVLRT-MHKGVTVSSLVPKLMAKSL 610
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 111/280 (39%), Gaps = 1/280 (0%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I + ++ + + A + QL+ G+ PD+ N L+ Y A +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ + G +P+ ++ ++ G A + + G S+ L++ K
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+++++ V+PD + N++++ + T + +EM + T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N LI + G L+ L E+ KN PDV T+ + A+ ++ + V M+
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
G P+ T L+ +V + +L +M +GVT
Sbjct: 559 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVT 597
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 213/441 (48%), Gaps = 21/441 (4%)
Query: 75 LEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ 134
L + PD++ N+LI+ Y + Q A S+ ++L+ Y P T+ LIK C+ G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 135 VQTA----LQFHDHVVAQGFHLNQISYGTLINGLCKM-GQTRASLQLLRKIEGKLVKPDV 189
++ A ++ +H V+ + Y I GL K G T ++ + ++++ KP
Sbjct: 206 IERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
YN +I+ K + ++ LY EM + + P++ T+ +L+ F G ++A + ++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+ + PDVY YN L++++ + G A + ++M G +P+ +Y ++D Y
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ A+ + M + G+ P ++S+ +++ K + V + + EM + P+T NS
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
+++ L L + ++K +A ++ + D+ TYNIL++ + G
Sbjct: 445 MLN------------LYGRLGQFTKMEKILA---EMENGPCTADISTYNILINIYGKAGF 489
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
L+ +E+ +L K + V T+T I ++ L+ + L + +M D+GC PD T +
Sbjct: 490 LERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 549
Query: 490 IIRALFEKGENYKAEKLLREM 510
++ A + + + +LR M
Sbjct: 550 LLSACSSEEQVEQVTSVLRTM 570
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 143/300 (47%), Gaps = 26/300 (8%)
Query: 242 EAIALLDEMVTK--NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
++I L+ E + + + PDV +N+L+DA+ ++ + KEA ++ +++ P TY
Sbjct: 136 DSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYAL 195
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTP---NVQSYNTMINGLCKIKM-VDEALNLFAEM 355
L+ YC+ + +A+ +L M V+P V YN I GL K K +EA+++F M
Sbjct: 196 LIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRM 255
Query: 356 DCKNIVPNTVTFNSLID--------------------GLCKSNIITYNSLLDALCKSHHV 395
P T T+N +I+ CK NI TY +L++A +
Sbjct: 256 KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLC 315
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+KA + +++++ G++PDV YN LM+ G A E+ + G +Y IM
Sbjct: 316 EKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIM 375
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++ + GL +A + +M+ G P + ++ A + + K E +++EM G+
Sbjct: 376 VDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGV 435
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 160/392 (40%), Gaps = 51/392 (13%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
AI + +++ P T N++IN Y ++ ++ + ++ +PN T+T L+
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
G + A + + + G ++P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDG-----------------------------------LEP 332
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
DV +YN +++S + A ++S M M P ++N ++ + G +A A+
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+EM I P + ++ +L+ A+ K V + ++ M + GV+P+ S+++ Y +
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRL 452
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+ K + IL M T ++ +YN +IN K ++ LF E+ KN P+ VT+
Sbjct: 453 GQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTW 512
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
S I + + K + + +++ D G PD T +L+ E
Sbjct: 513 TSRIGAYSRKKLYV---------------KCLEVFEEMIDSGCAPDGGTAKVLLSACSSE 557
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
+++ V++ + KG V+ +M L
Sbjct: 558 EQVEQVTSVLR-TMHKGVTVSSLVPKLMAKSL 588
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/280 (19%), Positives = 111/280 (39%), Gaps = 1/280 (0%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I + ++ + + A + QL+ G+ PD+ N L+ Y A +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ + G +P+ ++ ++ G A + + G S+ L++ K
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+++++ V+PD + N++++ + T + +EM + T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N LI + G L+ L E+ KN PDV T+ + A+ ++ + V M+
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
G P+ T L+ +V + +L +M +GVT
Sbjct: 537 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVT 575
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 158/301 (52%), Gaps = 1/301 (0%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHY-STAISLSHQLEFTGITPDIVTLNI 89
+ V+S F ++L + TP +IL LV + Y A L G+ P+ + N+
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ +C ++ A+ + K+L++ P+ ++ LI+G C GQV A++ D ++ +G
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F +++SY TL+N LC+ Q R + +LL +++ K PD+V YNT+I C++ DA
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ +M++ P+ V++ +LI G C G E L+EM++K +P N LV F
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C GKV+EA +V+ V+MK G + T+ ++ C E K K L + +T +
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435
Query: 330 Q 330
+
Sbjct: 436 R 436
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 9/275 (3%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ-FHD----HVVAQGFHLNQISYGTL 160
VLAK GY FT LIK + L F+ + Q HLN+I L
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI----L 161
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
+ G + + +L + V P+ YN ++ + C + ++ A+ L+ +M+ +
Sbjct: 162 DVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDV 221
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
+P V ++ LI GFC GQ+ A+ LLD+M+ K PD +Y L+++ C++ +++EA
Sbjct: 222 VPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYK 281
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
+L M +G P++V Y +++ G+C A+ +L+ M G +PN SY T+I GLC
Sbjct: 282 LLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC 341
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
M DE EM K P+ N L+ G C
Sbjct: 342 DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 149/310 (48%), Gaps = 12/310 (3%)
Query: 53 GKILTSLVKMKHYSTA-------ISLSHQLEFTGITPDIVTLNILINCY-CHQAQITSAF 104
G+I T L+K+ Y+ A + LEF TP LN +++ H+ + AF
Sbjct: 119 GEIFTYLIKV--YAEAKLPEKVLSTFYKMLEFN-FTPQPKHLNRILDVLVSHRGYLQKAF 175
Query: 105 SVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
+ G PNT ++ L++ CLN + A Q ++ + + SY LI G
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
C+ GQ +++LL + K PD + Y T+++SLC+ T + +A+ L M P +
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
V +N++I GFC + +A +LD+M++ +P+ +Y L+ C +G E L
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M+ +G P+ L+ G+C +V +A ++ + + G T + ++ +I +C +
Sbjct: 356 MISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN-ED 414
Query: 345 VDEALNLFAE 354
E + LF E
Sbjct: 415 ESEKIKLFLE 424
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 16/289 (5%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF-CKEGKVKEATNVLAVM 285
F LI + ++ ++ +M+ N P N ++D G +++A +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
GV PN +Y LM +CL +++ A + M +R V P+V SY +I G C+ V
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
+ A+ L +M K VP+ ++Y +LL++LC+ + +A L+ ++
Sbjct: 242 NGAMELLDDMLNKGFVPDR---------------LSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+ +G PD+ YN ++ G C E R +A++V+ D+L+ G +Y +I GLC +G+F
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
DE L +M G P +++ G+ +A ++ +M G
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 21/275 (7%)
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
G L++A L + P+ +YN+L+ AFC + A + M+++ V P+V +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
L+ G+C +VN A +L+ M +G P+ SY T++N LC+ + EA L M
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 358 KNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD---QGIQPDV 414
K P+ V +N++I G C+ D+A+ K + D G P+
Sbjct: 289 KGCNPDLVHYNTMILGFCRE------------------DRAMDARKVLDDMLSNGCSPNS 330
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
+Y L+ GLC++G ++ ++++++KG+ ++ G C G +EA ++
Sbjct: 331 VSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEV 390
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
+ NG + T+E +I + + E+ K + L +
Sbjct: 391 VMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 425
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 136/280 (48%), Gaps = 30/280 (10%)
Query: 246 LLDEMVTKN------INPDVYTYNILVDAFCKEGKVKEAT-NVLAVMMKQGVKPNVVTYT 298
L+D+++ K+ + +++TY I V A E K+ E + M++ P
Sbjct: 102 LIDDVLAKHRSSGYPLTGEIFTYLIKVYA---EAKLPEKVLSTFYKMLEFNFTPQPKHLN 158
Query: 299 SLMDGYCLVSE---VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
++D LVS + KA + S GV PN +SYN ++ C + A LF +M
Sbjct: 159 RILD--VLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 356 DCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
+++VP+ ++ LI G C+ V+ A+ L+ + ++G PD
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKG---------------QVNGAMELLDDMLNKGFVPDRL 261
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+Y L++ LC + +L+ A +++ + KG + Y MI G C+E +A +L M
Sbjct: 262 SYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
NGC P+++++ T+I L ++G + +K L EM+++G
Sbjct: 322 LSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 67/141 (47%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
V+ + + + +L P + + +L SL + A L +++ G PD+V N
Sbjct: 240 QVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYN 299
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I +C + + A VL +L G PN++++ TLI GLC G ++ + ++++
Sbjct: 300 TMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISK 359
Query: 149 GFHLNQISYGTLINGLCKMGQ 169
GF + L+ G C G+
Sbjct: 360 GFSPHFSVSNCLVKGFCSFGK 380
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 162/310 (52%), Gaps = 1/310 (0%)
Query: 65 YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTT 124
+ T SL H++ I P T I+ Y + A + + + G + +F T
Sbjct: 107 HPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 125 LIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL 184
++ LC + +V+ A + + + F ++ ++Y ++NG C + +T +L++L+++ +
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
+ P++ YNT++ + + A+ + EM VVT+ ++++GF + G++K A
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
+ DEM+ + + P V TYN ++ CK+ V+ A + M+++G +PNV TY L+ G
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
E ++ + ++ M G PN Q+YN MI + V++AL LF +M + +PN
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 365 VTFNSLIDGL 374
T+N LI G+
Sbjct: 406 DTYNILISGM 415
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 161/328 (49%), Gaps = 21/328 (6%)
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
D ++ ID + L ++L M ++RI PS TF + + G+ +A+ L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
M D+ ++N ++D CK +V++A + + + + VTY +++G+CL+
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLI 208
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
KA +L M +RG+ PN+ +YNTM+ G + + A F EM ++ + VT+
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 368 NSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRD 407
+++ G + ++ TYN+++ LCK +V+ A+ + +++
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+G +P+V TYN+L+ GL G +E++Q + +G +TY +MI + ++
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALF 495
AL L KM C+P+ T+ +I +F
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMF 416
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 51/292 (17%)
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
D ++++ +D + +++ M + P+ T+ + + Y + +KA +
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
+M + G ++ S+NT+++ LCK K V++A LF + G
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF----------------RALRGRFSV 193
Query: 378 NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL------------- 424
+ +TYN +L+ C KA+ ++K++ ++GI P++ TYN ++ G
Sbjct: 194 DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 425 -------CE---------------EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
CE G +K A+ V +++ +G +V TY MI LCK+
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ A+ + +M G P+ T+ +IR LF GE + E+L++ M G
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+ +F R LR + + + IL +K A+ + ++ GI P++ T N
Sbjct: 177 VEKAYELF-RALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
++ + QI A+ ++ K+ + + +T+TT++ G + G+++ A D ++ +G
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
V P V YN +I LCK V +A
Sbjct: 296 -----------------------------------VLPSVATYNAMIQVLCKKDNVENAV 320
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++ EMV P+V T+N LI G G+ L+ M + P+ TYN+++ +
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
+ +V++A + M PN+ TY L+ G
Sbjct: 381 SECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
C ++ ++N++LD LCKS V+KA L + +R + D TYN++++G C R A
Sbjct: 157 CFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKAL 215
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
EV+++++ +G + TY M+ G + G A +M+ C D +T+ T++
Sbjct: 216 EVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGF 275
Query: 495 FEKGENYKAEKLLREMMARGLL 516
GE +A + EM+ G+L
Sbjct: 276 GVAGEIKRARNVFDEMIREGVL 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 98/200 (49%), Gaps = 6/200 (3%)
Query: 62 MKHYSTAISLSHQLEF------TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGY 115
+K + A + H EF D+VT +++ + +I A +V +++++G
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
P+ T+ +I+ LC V+ A+ + +V +G+ N +Y LI GL G+ +
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
L++++E + +P+ YN +I + + V A L+ +M + LP++ T+N LI G
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 236 IVGQLKEAIALLDEMVTKNI 255
+ + ++ + ++ K I
Sbjct: 417 VRKRSEDMVVAGNQAFAKEI 436
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 209/427 (48%), Gaps = 26/427 (6%)
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
T L+ Y + AF V +I + G++ + + L+ L + + A Q + +
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDM 261
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ ++ +Y +I + ++G+ ++ L ++ + + +VV YNT++ L K +V
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A ++S MV P+ T++ L+ GQL ++ E+ + + +Y+Y L
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--L 378
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
V K G V EA + M VK +Y S+++ C + +A +L+ + ++GV
Sbjct: 379 VRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGV 438
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL----------- 374
+ YNT+ + L K+K + +LF +M P+ T+N LI
Sbjct: 439 VTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN 498
Query: 375 ---------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
CK +II+YNSL++ L K+ VD+A K+++++G+ PDV TY+ LM+
Sbjct: 499 IFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ R++ A + +++L KG + TY I+++ L K G EA+ L SKM+ G PD+I
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 486 TFETIIR 492
T+ + R
Sbjct: 619 TYTVLER 625
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 177/344 (51%), Gaps = 3/344 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I D+ V +FN ++ T ++ + ++ L K K AI + ++ TG P+ T
Sbjct: 283 IGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYT 342
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
++L+N + Q+ V+ + K Y I ++ L++ L G V A + +
Sbjct: 343 YSLLLNLLVAEGQLVRLDGVVE--ISKRYMTQGI-YSYLVRTLSKLGHVSEAHRLFCDMW 399
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+ + SY +++ LC G+T ++++L KI K V D +MYNT+ +L K ++
Sbjct: 400 SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQIS 459
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+L+ +M P + T+N LI F VG++ EAI + +E+ + PD+ +YN L+
Sbjct: 460 HIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLI 519
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ K G V EA M ++G+ P+VVTY++LM+ + V A + M +G
Sbjct: 520 NCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQ 579
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
PN+ +YN +++ L K EA++L+++M + + P+++T+ L
Sbjct: 580 PNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 180/353 (50%), Gaps = 18/353 (5%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
A+ L +++ G+T ++V N L+ + A V +++++ G +PN T++ L+
Sbjct: 289 AVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLN 348
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
L GQ+ ++ V ++ Q Y L+ L K+G + +L + VK
Sbjct: 349 LLVAEGQL---VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
+ Y ++++SLC +A + S++ ++ + +N++ + Q+ L
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLF 465
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
++M +PD++TYNIL+ +F + G+V EA N+ + + KP++++Y SL++
Sbjct: 466 EKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKN 525
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+V++A M ++G+ P+V +Y+T++ K + V+ A +LF EM
Sbjct: 526 GDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM------------ 573
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
L+ G C+ NI+TYN LLD L K+ +A+ L K++ QG+ PD TY +L
Sbjct: 574 --LVKG-CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 186/411 (45%), Gaps = 24/411 (5%)
Query: 105 SVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
S+L ++K N T LI +Q L+ V +N +Y L+
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL---VKKWDLKMNSFTYKCLLQAY 213
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
+ + + +I K D+ YN ++D+L KD A ++ +M
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDE---KACQVFEDMKKRHCRRDE 270
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
T+ +I +G+ EA+ L +EM+T+ + +V YN L+ K V +A V +
Sbjct: 271 YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M++ G +PN TY+ L++ ++ + ++ + +R +T + SY ++ L K+
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSY--LVRTLSKLGH 387
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
V EA LF +M + K +Y S+L++LC + +AI ++ K
Sbjct: 388 VSEAHRLFCDMWSFPV---------------KGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
I ++G+ D YN + L + ++ + ++ + + G + TY I+I + G
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
DEA+ + ++E + C PD I++ ++I L + G+ +A +EM +GL
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 186/370 (50%), Gaps = 21/370 (5%)
Query: 150 FHLNQI--SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
FH ++ S +++ + + G ++ +RK +L++P+ ++ ++ +V
Sbjct: 128 FHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKK 185
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A + EM + P F L+ C G +KEA + ++M K P++ + L+
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLY 244
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+C+EGK+ EA VL M + G++P++V +T+L+ GY ++ A ++N M +RG P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 328 NVQSYNTMINGLCKI-KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
NV Y +I LC+ K +DEA+ +F EM+ C+++I+TY +L+
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYG---------------CEADIVTYTALI 349
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
CK +DK +++ +R +G+ P TY +M ++ + + E+I+ + +G
Sbjct: 350 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCH 409
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
+ Y ++I CK G EA+ L ++ME NG P TF +I +G +A
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH 469
Query: 507 LREMMARGLL 516
+EM++RG+
Sbjct: 470 FKEMVSRGIF 479
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 206/445 (46%), Gaps = 28/445 (6%)
Query: 59 LVKMKHYSTAISLSHQLEFTG---ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGY 115
L KM+ + L ++ T I P++ +L+ + + A VL ++ K G
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFV--VLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ F L+ LC NG V+ A + F D + + F N + +L+ G C+ G+ +
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFED--MREKFPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
++L +++ ++PD+V++ ++ + DA++L ++M P+V + LI
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 235 CIV-GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
C ++ EA+ + EM D+ TY L+ FCK G + + +VL M K+GV P+
Sbjct: 317 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 376
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
VTY +M + + + ++ M +RG P++ YN +I CK+ V EA+ L+
Sbjct: 377 QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWN 436
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI--Q 411
EM+ + P TF +I+G T L C K++ +GI
Sbjct: 437 EMEANGLSPGVDTFVIMINGF------TSQGFLIEACNH---------FKEMVSRGIFSA 481
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK--GYPVTVRTYTIMINGLCKEGLFDEAL 469
P T L++ L + +L+ A++V + K + V +TI I+ L +G EA
Sbjct: 482 PQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEAC 541
Query: 470 TLLSKMEDNGCMPDAITFETIIRAL 494
+ M + MP T+ +++ L
Sbjct: 542 SYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 7/302 (2%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH-QAQITSAFS 105
P I+ F +L+ + A L + + G P++ +LI C + ++ A
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V ++ + G + + +T+T LI G C G + D + +G +Q++Y ++
Sbjct: 329 VFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHE 388
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
K Q L+L+ K++ + PD+++YN +I CK V +A L++EM A + P V
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNI--NPDVYTYNILVDAFCKEGKVKEATNVLA 283
TF +I GF G L EA EMV++ I P T L++ ++ K++ A +V +
Sbjct: 449 TFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS 508
Query: 284 VMMKQ--GVKPNVVTYTSLMDGYCLVSEVNKA-KYILNSMPQRGVTPNVQSYNTMINGLC 340
+ + + NV +T + V +A Y L+ M + + P +Y ++ GL
Sbjct: 509 CISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMM-EMDLMPQPNTYAKLMKGLN 567
Query: 341 KI 342
K+
Sbjct: 568 KL 569
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 107/279 (38%), Gaps = 39/279 (13%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D+ + +F + R I+ + +++ K S+ + G+ P VT
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
++ + + Q ++ K+ ++G P+ + + +I+ C G+V+ A++ + + A
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G ++ +ING G + +A
Sbjct: 442 GLSPGVDTFVIMINGFTSQG-----------------------------------FLIEA 466
Query: 209 FNLYSEMVAMRIL--PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK--NINPDVYTYNI 264
N + EMV+ I P T SL+ +L+ A + + K + +V + I
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTI 526
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
+ A +G VKEA + MM+ + P TY LM G
Sbjct: 527 WIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 202/434 (46%), Gaps = 20/434 (4%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D V ++L+ Y + F V ++L G+ + +T L+ GL ++ Q +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ G H N ++ L N C R L K+E + +PD+V YNT++ S C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ +AF LY M R++P +VT+ SLI G C G+++EA MV + I PD +Y
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N L+ A+CKEG ++++ +L M+ V P+ T +++G+ + A + + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 323 RGVTPNVQSYNTMINGLC---KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
V + + +I LC K L+ E + P T+N+LI+ L + +
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDA 462
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
I ++A+ L K+++Q D +TY L+ LC GR + A+ ++ +
Sbjct: 463 I---------------EEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ ++ G CKE FD+A LLS + D ++ ++++A+ E G
Sbjct: 508 MFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGC 567
Query: 500 NYKAEKLLREMMAR 513
YK L+E M R
Sbjct: 568 GYKKALELQERMQR 581
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 218/449 (48%), Gaps = 18/449 (4%)
Query: 48 PIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVL 107
P++ F ++ +K+ + ++ +G + +VT N L+N + + V
Sbjct: 166 PVV-FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 108 AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM 167
+ + + G PNT TF L C + + F + + +GF + ++Y TL++ C+
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTF 227
G+ + + L + + + V PD+V Y ++I LCKD V +A + MV I P +++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 228 NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
N+LIY +C G ++++ LL EM+ ++ PD +T ++V+ F +EG++ A N + + +
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS-MPQRGVTPNVQSYNTMINGLCKIKMVD 346
V L+ C + AK++L+ + + G ++YN +I L + ++
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIE 464
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EAL L ++ +N V + T+ +LI LC+ I N +A +L+ ++
Sbjct: 465 EALVLKGKLKNQNQVLDAKTYRALIGCLCR---IGRNR------------EAESLMAEMF 509
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL-F 465
D ++PD L+ G C+E A+ ++ + +Y ++ +C+ G +
Sbjct: 510 DSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGY 569
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRAL 494
+AL L +M+ G +P+ +T + +I+ L
Sbjct: 570 KKALELQERMQRLGFVPNRLTCKYLIQVL 598
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 178/362 (49%), Gaps = 16/362 (4%)
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ + + + L+ G K+G ++ R++ VV N +++ L K L+ D +
Sbjct: 163 NWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQ 222
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
+YS M + I P+ TFN L FC +E L++M + PD+ TYN LV ++C
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
+ G++KEA + +M ++ V P++VTYTSL+ G C V +A + M RG+ P+
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALC 390
SYNT+I CK M+ ++ L EM ++VP+ T +++G + +
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLL--------- 393
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL-TKGYPVTV 449
A+ + ++R + + L+ LC+EG+ A+ ++ ++ +G+
Sbjct: 394 ------SAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
TY +I L + +EAL L K+++ + DA T+ +I L G N +AE L+ E
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 510 MM 511
M
Sbjct: 508 MF 509
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 177/384 (46%), Gaps = 41/384 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D +++ + R+ P F + ++ ++E G PD+VT N
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L++ YC + ++ AF + + ++ P+ +T+T+LIKGLC +G+V+ A Q +V +G
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +SY TLI CK G + S +LL ++ G V PD I++ ++ + A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 210 NLYSEMVAMRI-LPSVV-----------------------------------TFNSLIYG 233
N E+ +++ +P V T+N+LI
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIES 456
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
++EA+ L ++ +N D TY L+ C+ G+ +EA +++A M VKP+
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILN--SMPQRGVTPNVQSYNTMINGLCKIKM-VDEALN 350
+L+ GYC + +KA+ +L+ +M R P +SYN+++ +C+ +AL
Sbjct: 517 SFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDP--ESYNSLVKAVCETGCGYKKALE 574
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGL 374
L M VPN +T LI L
Sbjct: 575 LQERMQRLGFVPNRLTCKYLIQVL 598
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 17/260 (6%)
Query: 241 KEAIALLDEMV--TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
KE + + +V T N D +++LV + K G V+E V ++ G +VVT
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
L++G + + + + M + G+ PN ++N + N C E + +M+ +
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEE 265
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
P+ VT+N+L+ C+ + +A L K + + + PD+ TY
Sbjct: 266 GFEPDLVTYNTLVSSYCRRG---------------RLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+ GLC++GR++ A + ++ +G +Y +I CKEG+ ++ LL +M N
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN 370
Query: 479 GCMPDAITFETIIRALFEKG 498
+PD T + I+ +G
Sbjct: 371 SVVPDRFTCKVIVEGFVREG 390
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 19/244 (7%)
Query: 276 KEATNVLAVMMKQGVKPNV--VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
KE +V V++ + N V + L+ GY + V + + + G + +V + N
Sbjct: 146 KEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCN 205
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-SNIITYNSLLDALCKS 392
++NGL K+ ++++ +++ M I PNT TFN L + C SN + L+
Sbjct: 206 HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE----- 260
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
K+ ++G +PD+ TYN L+ C GRLK A + + + + + TY
Sbjct: 261 -----------KMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTY 309
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
T +I GLCK+G EA +M D G PD +++ T+I A ++G +++KLL EM+
Sbjct: 310 TSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLG 369
Query: 513 RGLL 516
++
Sbjct: 370 NSVV 373
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 174/348 (50%), Gaps = 4/348 (1%)
Query: 30 VDDVVSIFNRLL---RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
VD +F+ LL R + P + F + + +K + A Q++ G P + +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRV-FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N ++ Q ++ A ++ + PN T ++ G C +G++ ++ +
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
GF +SY TLI G C+ G ++L+L + ++P+VV +NT+I C+ +
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ EM A+ + P+ VT+N+LI G+ G + A ++MV I D+ TYN L+
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
CK+ K ++A + + K+ + PN T+++L+ G C+ ++ + SM + G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
PN Q++N +++ C+ + D A + EM ++I ++ T + + +GL
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 173/347 (49%), Gaps = 20/347 (5%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+++++ + +A + + +M LP+V + N+ + G++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
I+P+ YT N+++ +C+ GK+ + +L M + G + V+Y +L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
+ A + N M + G+ PNV ++NT+I+G C+ + EA +F EM N+ PNTVT+N+L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 371 IDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
I+G + +I+TYN+L+ LCK KA +K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
P+ T++ L+ G C E+ + ++ G +T+ ++++ C+ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
+L +M D+ T + L +G++ +KLL+EM + L+
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQ 516
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 179/365 (49%), Gaps = 17/365 (4%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP + + L + H + +A ++ G+ P + + L G+V AL+
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
F+ + N + +++G C+ G+ ++LL+ +E + V YNT+I C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ L++ A L + M + P+VVTFN+LI+GFC +L+EA + EM N+ P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
TYN L++ + ++G + A M+ G++ +++TY +L+ G C ++ KA + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
+ + PN +++ +I G C K D L + S+I C N
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFEL---------------YKSMIRSGCHPNEQ 449
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
T+N L+ A C++ D A +++++ + I D RT + + +GL +G+ + ++++Q++
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 441 LTKGY 445
K +
Sbjct: 510 EGKKF 514
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ F ++ + A + +++ + P+ VT N LIN Y Q AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ G Q + +T+ LI GLC + + A QF + + N ++ LI G C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+L + + P+ +N ++ + C++ A + EMV I T
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
+ + G G+ + LL EM K
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 174/348 (50%), Gaps = 4/348 (1%)
Query: 30 VDDVVSIFNRLL---RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
VD +F+ LL R + P + F + + +K + A Q++ G P + +
Sbjct: 147 VDLPAKVFDALLYSYRECDSTPRV-FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVES 205
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N ++ Q ++ A ++ + PN T ++ G C +G++ ++ +
Sbjct: 206 CNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDME 265
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
GF +SY TLI G C+ G ++L+L + ++P+VV +NT+I C+ +
Sbjct: 266 RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ EM A+ + P+ VT+N+LI G+ G + A ++MV I D+ TYN L+
Sbjct: 326 EASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
CK+ K ++A + + K+ + PN T+++L+ G C+ ++ + SM + G
Sbjct: 386 FGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCH 445
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
PN Q++N +++ C+ + D A + EM ++I ++ T + + +GL
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGL 493
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 173/347 (49%), Gaps = 20/347 (5%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+++++ + +A + + +M LP+V + N+ + G++ A+ EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
I+P+ YT N+++ +C+ GK+ + +L M + G + V+Y +L+ G+C +
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
+ A + N M + G+ PNV ++NT+I+G C+ + EA +F EM N+ PNTVT+N+L
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 371 IDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
I+G + +I+TYN+L+ LCK KA +K++ + +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
P+ T++ L+ G C E+ + ++ G +T+ ++++ C+ FD A
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQ 469
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
+L +M D+ T + L +G++ +KLL+EM + L+
Sbjct: 470 VLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQ 516
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 179/365 (49%), Gaps = 17/365 (4%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP + + L + H + +A ++ G+ P + + L G+V AL+
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
F+ + N + +++G C+ G+ ++LL+ +E + V YNT+I C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ L++ A L + M + P+VVTFN+LI+GFC +L+EA + EM N+ P+
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
TYN L++ + ++G + A M+ G++ +++TY +L+ G C ++ KA + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
+ + PN +++ +I G C K D L + S+I C N
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFEL---------------YKSMIRSGCHPNEQ 449
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
T+N L+ A C++ D A +++++ + I D RT + + +GL +G+ + ++++Q++
Sbjct: 450 TFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Query: 441 LTKGY 445
K +
Sbjct: 510 EGKKF 514
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ F ++ + A + +++ + P+ VT N LIN Y Q AF
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ G Q + +T+ LI GLC + + A QF + + N ++ LI G C
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+L + + P+ +N ++ + C++ A + EMV I T
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
+ + G G+ + LL EM K
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 189/401 (47%), Gaps = 18/401 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEF-GKILTSLVKMKHYSTAISLSHQL--EFTGITPDIV 85
N+ D S+FN + S P ++F +L S + + + L + P
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 86 TLNILIN--CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
T IL++ C + I++ VL ++ G +P+ +T ++ LC G+V A
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKD 202
+ + + +Y L+ LCK + + ++ VKPD+V + +ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ +A L S++ P +N+++ GFC + + EA+ + +M + + PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N L+ K G+V+EA L M+ G +P+ TYTSLM+G C E A +L M
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN---- 378
RG PN +YNT+++GLCK +++D+ + L+ M + + + +L+ L KS
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Query: 379 -------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
+ SL DA S ++ + +KK ++QG+ P
Sbjct: 424 AYEVFDYAVDSKSLSDASAYS-TLETTLKWLKKAKEQGLVP 463
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 180/391 (46%), Gaps = 27/391 (6%)
Query: 56 LTSLVKMKHYSTAISLSHQLEFTGITP-DIVTLNILINCYCHQAQITSAFSVLAKILKK- 113
L + K + S A SL + + T P D+ N ++ Y A + + ILK
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 114 -GYQPNTITFTTLIKGLCL--NGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
++P TF L+ C + + + + +V G +Q++ + LC+ G+
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR----ILPSVVT 226
+ L++++ K PD YN ++ LCK D +Y + MR + P +V+
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCK---CKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
F LI C L+EA+ L+ ++ PD + YN ++ FC K EA V M
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
++GV+P+ +TY +L+ G V +A+ L +M G P+ +Y +++NG+C+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
AL+L EM+ + PN T YN+LL LCK+ +DK + L + ++
Sbjct: 353 GALSLLEEMEARGCAPNDCT---------------YNTLLHGLCKARLMDKGMELYEMMK 397
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
G++ + Y L+ L + G++ A EV
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 188/389 (48%), Gaps = 35/389 (8%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTL--INGLCKMGQTRAS 173
PN +L + ++ L+FH+ V+ SYG++ +N K+ Q
Sbjct: 62 SPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQ--------SYGSIAVVNDTVKLFQ---- 109
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCK--DTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+L+ +P + ++ C+ D+ +++ + + MV + P VT + +
Sbjct: 110 -HILKSQPN--FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAV 166
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ-GV 290
C G++ EA L+ E+ K+ PD YTYN L+ CK + + M V
Sbjct: 167 RSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV 226
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
KP++V++T L+D C + +A Y+++ + G P+ YNT++ G C + EA+
Sbjct: 227 KPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG 286
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
++ +M + + P+ +T+N+LI GL K+ V++A +K + D G
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAG---------------RVEEARMYLKTMVDAGY 331
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
+PD TY LM+G+C +G A +++++ +G TY +++GLCK L D+ +
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEKGE 499
L M+ +G ++ + T++R+L + G+
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGK 420
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 135/562 (24%), Positives = 233/562 (41%), Gaps = 83/562 (14%)
Query: 30 VDDVVSIFNRLLRMS-PTPPIIEFGKILTSLVKMKHYSTAISLSH--QLEFTGITPDIVT 86
VD+ S+F+R+ M P + +L ++ K S + + ++ G D T
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
L ++ YC+ + A SV +IL +G+ I+ T L+ C GQV A + + +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLE 275
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+ LN +Y LI+G K + + QL K+ + D+ +Y+ +I LCK +
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLE 335
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD--VYTYNI 264
A +LY E+ I P L+ F +L + E++ +I+ + Y
Sbjct: 336 MALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSR----ITEVIIGDIDKKSVMLLYKS 391
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY----------------CLV- 307
L + F + V EA + + +M V L+ + CLV
Sbjct: 392 LFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVK 451
Query: 308 -SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
++V+ A +L+ + Q G+ P YN +I G+CK +E+L L EM + P+ T
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Query: 367 FNS-----------------------------------LIDGLCKS-------------- 377
N L+ LC++
Sbjct: 512 LNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 378 ------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+++ + +D L K+ VD+ + L + I G PDV Y++L+ LC+ R
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A + ++++KG TV TY MI+G CKEG D L+ + +M ++ PD IT+ ++I
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 492 RALFEKGENYKAEKLLREMMAR 513
L G +A EM +
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGK 713
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 219/510 (42%), Gaps = 49/510 (9%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D +F ++ RM I + ++ L K K A+SL +++ +GI PD L
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA-- 147
L+ + +++++ V+ + K + + + +L +G N V A F +++
Sbjct: 359 LLCSFSEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNY 416
Query: 148 ----------------QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVM 191
+ + S +IN L K + ++ LL I + P +M
Sbjct: 417 ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE------AIA 245
YN II+ +CK+ ++ L EM + PS T N CI G L E A+
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN------CIYGCLAERCDFVGALD 530
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
LL +M P + LV C+ G+ +A L + +G ++V T+ +DG
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
V++ + + G P+V +Y+ +I LCK EA LF EM K + P
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
T+NS+IDG CK +D+ ++ I ++ + PDV TY L+ GLC
Sbjct: 651 TYNSMIDGW---------------CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 426 EEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
GR A ++ K YP + T+ +I GLCK G EAL +ME+ PD+
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRI-TFMALIQGLCKCGWSGEALVYFREMEEKEMEPDS 754
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMARG 514
+ +++ + + REM+ +G
Sbjct: 755 AVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 164/344 (47%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+ VD V++ + +++ P + + I+ + K ++ L +++ G+ P TL
Sbjct: 453 NKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTL 512
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N + C + A +L K+ G++P T L+K LC NG+ A ++ D V
Sbjct: 513 NCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAG 572
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+GF + ++ I+GL K L+L R I PDV+ Y+ +I +LCK +
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A L++EMV+ + P+V T+NS+I G+C G++ ++ + M NPDV TY L+
Sbjct: 633 ADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIH 692
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C G+ EA M + PN +T+ +L+ G C +A M ++ + P
Sbjct: 693 GLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEP 752
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+ Y ++++ + ++ +F EM K P +V N ++
Sbjct: 753 DSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 179/381 (46%), Gaps = 17/381 (4%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
I PD +L+I+INC ++ A ++L I++ G P + + +I+G+C G+ + +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
L+ + G +Q + + L + +L LL+K+ +P + ++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
LC++ DA ++ L +V + I G + + L ++ PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
V Y++L+ A CK + EA + M+ +G+KP V TY S++DG+C E+++ +
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
M + P+V +Y ++I+GLC EA+ + EM K+ PN +TF +LI GLCK
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 379 IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
+A+ +++ ++ ++PD Y L+ + + +
Sbjct: 734 ---------------WSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFR 778
Query: 439 DLLTKG-YPVTV-RTYTIMIN 457
+++ KG +PV+V R Y + +N
Sbjct: 779 EMVHKGRFPVSVDRNYMLAVN 799
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 216/488 (44%), Gaps = 44/488 (9%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGI-TPDIVTLNILI 91
VV + N MSP FG + L A S+ ++ G+ P+ T N L+
Sbjct: 129 VVDVLNSRCFMSPGA----FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLL 184
Query: 92 NCYC--HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+ + + + L ++ G+ + T T +++ C G+ + AL + ++++G
Sbjct: 185 EAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRG 244
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ IS L+ CK GQ + +L+ +E + ++ + Y +I K++ + AF
Sbjct: 245 WLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAF 303
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ +M M + + ++ LI G C L+ A++L E+ I PD L+ +F
Sbjct: 304 QLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSF 363
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA-KYILNSMPQRGVTPN 328
+E ++ T V+ + + K ++ Y SL +G+ V++A +I N M N
Sbjct: 364 SEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMG------N 415
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+S +G V E + L + + K I+P++ + + +I+ L K+N
Sbjct: 416 YES-----DG------VSEIVKLLKDHN-KAILPDSDSLSIVINCLVKAN---------- 453
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
VD A+ L+ I G+ P YN +++G+C+EGR + + +++ ++ G +
Sbjct: 454 -----KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
T + L + F AL LL KM G P +++ L E G A K L
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 509 EMMARGLL 516
++ G L
Sbjct: 569 DVAGEGFL 576
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 209/442 (47%), Gaps = 22/442 (4%)
Query: 75 LEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ 134
++F GI+ + LNI +N C + A ++L ++ G P+ IT+ TLIKG
Sbjct: 6 MKFPGISTKL--LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIG 63
Query: 135 VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
+ A + G + +Y +LI+G K LQL ++ + PD+ YNT
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK 253
++ K +AF + E + + ++P + T+N L+ C G AI L + ++
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
+ P++ TYNIL++ CK +V ++ + K G PN VTYT+++ Y + K
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ M + G T + + +++ L K +EA E+ + G
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHEL--------------VRSG 288
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+I++YN+LL+ K ++D L+++I +G++PD T+ I+++GL G A
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGA 348
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
++ + + G +V T +I+GLCK G D A+ L + ME + D T+ +++
Sbjct: 349 EKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHN 404
Query: 494 LFEKGENYKAEKLLREMMARGL 515
L + G A KLL +G+
Sbjct: 405 LCKDGRLVCASKLLLSCYNKGM 426
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 194/405 (47%), Gaps = 31/405 (7%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ PD++T N LI Y I A++V ++ + G +P+ T+ +LI G N +
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKLVKPDVVMYNTIID 197
LQ D ++ G + SY TL++ K+G+ + ++L + I + P + YN ++D
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLD 162
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+LCK +A L+ + + R+ P ++T+N LI G C ++ ++ E+ P
Sbjct: 163 ALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ TY ++ + K ++++ + M K+G + +++ +A +
Sbjct: 222 NAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECM 281
Query: 318 NSMPQRGV-TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC- 375
+ + + G + ++ SYNT++N K +D +L E++ K + P+ T +++GL
Sbjct: 282 HELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLN 341
Query: 376 -------------------KSNIITYNSLLDALCKSHHVDKAIALIK--KIRDQGIQPDV 414
+ +++T N L+D LCK+ HVD+A+ L ++RD+
Sbjct: 342 IGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDE------ 395
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
TY ++ LC++GRL A +++ KG + +++G+
Sbjct: 396 FTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGI 440
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 170/350 (48%), Gaps = 7/350 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D+ ++ R+ P + + +++ K + + L ++ +G++PD+ + N
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 89 ILINCYCHQAQITSAFSVLAK-ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
L++CY + AF +L + I G P T+ L+ LC +G A++ H+ +
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ ++Y LINGLCK + + ++R+++ P+ V Y T++ K +
Sbjct: 183 R-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI-NPDVYTYNILV 266
L+ +M +++ G+ +EA + E+V + D+ +YN L+
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ + K+G + ++L + +G+KP+ T+T +++G + A+ L + + G+
Sbjct: 302 NLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQ 361
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
P+V + N +I+GLCK VD A+ LFA M+ V + T+ S++ LCK
Sbjct: 362 PSVVTCNCLIDGLCKAGHVDRAMRLFASME----VRDEFTYTSVVHNLCK 407
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 202/433 (46%), Gaps = 15/433 (3%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ D +LI Y + + + K+ G + ++ +L K + G+ A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
++ + +V++G + +Y ++ G + +L+ ++ + + PD +NT+I+
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
C+ + +A L+ EM +I PSVV++ ++I G+ V ++ + + + +EM + I P+
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPN 359
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP-NVVTYTSLMDGYCLVSEVNKAKYIL 317
TY+ L+ C GK+ EA N+L MM + + P + + L+ ++ A +L
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV---PNTVTFNSLIDGL 374
+M V Y +I CK + A+ L + K I+ +T+
Sbjct: 420 KAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP----- 474
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
YN +++ LC + KA L +++ +G+Q D N L+ G +EG ++
Sbjct: 475 -----SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSY 528
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
E+++ + +G P Y ++I +G +A T L M ++G +PD+ F ++I +L
Sbjct: 529 EILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESL 588
Query: 495 FEKGENYKAEKLL 507
FE G A +++
Sbjct: 589 FEDGRVQTASRVM 601
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 187/394 (47%), Gaps = 29/394 (7%)
Query: 134 QVQTALQFHDHVVAQGF-HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY 192
+++ ALQF G ++ ++ +I L ++ + + +L + K V D M+
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
+I+S K +V ++ ++ +M + + ++ ++NSL G+ A ++MV+
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVS 248
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
+ + P +TYN+++ F +++ A M +G+ P+ T+ ++++G+C ++++
Sbjct: 249 EGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDE 308
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
A+ + M + P+V SY TMI G + VD+ L +F EM I PN T+++L+
Sbjct: 309 AEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLP 368
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP-DVRTYNILMDGLCEEGRLK 431
GLC + + +A ++K + + I P D + L+ + G +
Sbjct: 369 GLCDAGKMV---------------EAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMA 413
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS---------KMEDNGCM- 481
A EV++ + T P Y ++I CK ++ A+ LL + +D M
Sbjct: 414 AATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEME 473
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
P A + II L G+ KAE L R++M RG+
Sbjct: 474 PSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGV 505
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/509 (21%), Positives = 215/509 (42%), Gaps = 36/509 (7%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
FN+++ P + +L TA+ ++ GI+PD T N +IN +C
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
++ A + ++ P+ +++TT+IKG +V L+ + + + G N +
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKP-DVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
Y TL+ GLC G+ + +L+ + K + P D ++ ++ S K + A + M
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAM 422
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI--------NPDVYTYNILVD 267
+ + + LI C AI LLD ++ K I + YN +++
Sbjct: 423 ATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIE 482
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C G+ +A + +MK+GV+ + +L+ G+ + + IL M +RGV
Sbjct: 483 YLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPR 541
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS--- 384
+Y +I +A M VP++ F S+I+ L + + S
Sbjct: 542 ESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVM 601
Query: 385 -------------------LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
+L+AL HV++A+ I + G D+ + L+ L
Sbjct: 602 MIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDS---LLSVLS 658
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
E+G+ A +++ L + + +Y +++ L G A ++L K+ + G D
Sbjct: 659 EKGKTIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWK 718
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARG 514
+ + +I++L ++G N K +L M+ +G
Sbjct: 719 SSDELIKSLNQEG-NTKQADVLSRMIKKG 746
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 167/321 (52%), Gaps = 17/321 (5%)
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ +Y LI+G + G +L+L ++ K VKP V + T+I LCKD+ V +A +
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 213 SEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+M+ + + P+V + SLI C +G+L A L DE I D Y+ L+ + K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G+ E + +L M ++G KP+ VTY L++G+C+ ++ A +L+ M ++G+ P+V S
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCK 391
YN ++ +IK +EA LF +M + P+T+++ + DGLC+
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEG-------------- 376
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
++A ++ ++ +G +P + LCE G+L+ +VI L +G
Sbjct: 377 -LQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSL-HRGIAGDADV 434
Query: 452 YTIMINGLCKEGLFDEALTLL 472
+++MI +CKE + +++ LL
Sbjct: 435 WSVMIPTMCKEPVISDSIDLL 455
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 172/337 (51%), Gaps = 21/337 (6%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+P+ T+ LI G +G AL+ D +V + +++GTLI+GLCK + + +L+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 176 L---LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+ + K+ G V+P V +Y ++I +LC+ ++ AF L E +I +++LI
Sbjct: 209 MKHDMLKVYG--VRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G+ E +L+EM K PD TYN+L++ FC E + A VL M+++G+KP
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+V++Y ++ + + + +A Y+ MP+RG +P+ SY + +GLC+ +EA +
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
EM K P + LC+S + +L + S H +GI
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCESGKL---EILSKVISSLH-------------RGIAG 430
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
D +++++ +C+E + ++ +++ + + + P++
Sbjct: 431 DADVWSVMIPTMCKEPVISDSIDLLLNTVKEDGPLSA 467
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 181/371 (48%), Gaps = 26/371 (7%)
Query: 150 FHLNQISYGTLIN--GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
F + + Y +I G KM + L K + ++V P +++ +I+ + L +
Sbjct: 43 FRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIV-PTEIIFCNVINFFGRGKLPSR 101
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL---KEAIALLDEMVTKNINPDVYTYNI 264
A +++ EM R +V + NSL+ G+L KE ++ +DE PD TYNI
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG----KPDACTYNI 157
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ-R 323
L+ + G +A + M+K+ VKP VT+ +L+ G C S V +A + + M +
Sbjct: 158 LIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVY 217
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
GV P V Y ++I LC+I + A L E +G K + Y+
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEA---------------YEGKIKVDAAIYS 262
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+L+ +L K+ ++ +++++ ++G +PD TYN+L++G C E ++A V+ +++ K
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEK 322
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
G V +Y +++ + ++EA L M GC PD +++ + L E + +A
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 504 EKLLREMMARG 514
+L EM+ +G
Sbjct: 383 AVILDEMLFKG 393
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
E+ K K L+S+ + G P+ +YN +I+G + D+AL LF EM K + P VTF
Sbjct: 133 ELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
+LI GLCK + + +AL H + K G++P V Y L+ LC+ G
Sbjct: 192 TLIHGLCKDSRVK-----EALKMKHDMLKVY---------GVRPTVHIYASLIKALCQIG 237
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
L A ++ + V Y+ +I+ L K G +E +L +M + GC PD +T+
Sbjct: 238 ELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYN 297
Query: 489 TIIRALFEKGENYKAEKLLREMMARGL 515
+I + ++ A ++L EM+ +GL
Sbjct: 298 VLINGFCVENDSESANRVLDEMVEKGL 324
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQ-LEFTGITPDIVTLNI 89
DD + +F+ +++ P + FG ++ L K A+ + H L+ G+ P +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI C +++ AF + + + + + ++TLI L G+ + + +G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y LING C + ++ ++L ++ K +KPDV+ YN I+ + +A
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ +M P +++ + G C Q +EA +LDEM+ K P +
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
C+ GK++ + V++ + + G+ + ++ ++ C
Sbjct: 409 CESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMC 443
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ PD+++ N+++ + + A + + ++G P+T+++ + GLC Q + A
Sbjct: 323 GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEA 382
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL---VKPDVVMYNTI 195
D ++ +G+ + + LC+ G+ L++L K+ L + D +++ +
Sbjct: 383 AVILDEMLFKGYKPRRDRLEGFLQKLCESGK----LEILSKVISSLHRGIAGDADVWSVM 438
Query: 196 IDSLCKDTLVTDAFNL 211
I ++CK+ +++D+ +L
Sbjct: 439 IPTMCKEPVISDSIDL 454
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 160/309 (51%), Gaps = 15/309 (4%)
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y T++NG K G +L+ +++ + KPDV +N +I+ C+ + A +L+ EM
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
P+VV+FN+LI GF G+++E + + EM+ T ILVD C+EG+V
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+A ++ ++ + V P+ Y SL++ C ++ +A ++ + ++G TP + T++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
GL K ++A +M I+P++VTFN L+ LC S+ T + L L S
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASS---- 431
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+G +PD TY++L+ G +EGR K + ++ ++L K + TY ++
Sbjct: 432 -----------KGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Query: 457 NGLCKEGLF 465
+GL G F
Sbjct: 481 DGLSCTGKF 489
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 161/327 (49%), Gaps = 25/327 (7%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL---PSVVTFNSLIYGFCIVGQLKEAIALL 247
++ + ID+ C+ + A + M R++ P+V +N+++ G+ G + +A+
Sbjct: 159 IFRSAIDAYCRARKMDYALLAFDTM--KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
M + PDV T+NIL++ +C+ K A ++ M ++G +PNVV++ +L+ G+
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
++ + + M + G + + +++GLC+ VD+A L ++ K ++P+ +
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 368 NSLIDGLCKSN--------------------IITYNSLLDALCKSHHVDKAIALIKKIRD 407
SL++ LC N I +L++ L KS +KA ++K+ +
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
GI PD T+N+L+ LC +A + +KGY TY ++++G KEG E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRAL 494
L+++M D +PD T+ ++ L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 143/293 (48%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++ VK A+ ++ PD+ T NILIN YC ++ A +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ +KG +PN ++F TLI+G +G+++ ++ ++ G ++ + L++GLC+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G+ + L+ + K V P Y ++++ LC + A + E+ P +
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+L+ G G+ ++A +++M+ I PD T+N+L+ C +A + +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
+G +P+ TY L+ G+ + + ++N M + + P++ +YN +++GL
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 157/347 (45%), Gaps = 20/347 (5%)
Query: 91 INCYCHQAQITSA---FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
I+ YC ++ A F + +++ +PN + T++ G +G + AL+F+ +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGK 221
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ + ++ LING C+ + +L L R+++ K +P+VV +NT+I + +
Sbjct: 222 ERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ EM+ + S T L+ G C G++ +A L+ +++ K + P + Y LV+
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C E K A ++ + K+G P + T+L++G KA + M G+ P
Sbjct: 342 KLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILP 401
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
+ ++N ++ LC +A L K P+ T++ L+ G K
Sbjct: 402 DSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG--------- 452
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+ L+ ++ D+ + PD+ TYN LMDGL G+ Q
Sbjct: 453 ------RRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 21/266 (7%)
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
+ +DA+C+ K+ A M + KPNV Y ++++GY +++KA M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL------ 374
+ P+V ++N +ING C+ D AL+LF EM K PN V+FN+LI G
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 375 --------------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
C+ + T L+D LC+ VD A L+ + ++ + P Y L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
++ LC E + A E++++L KG T ++ GL K G ++A + KM + G
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 481 MPDAITFETIIRALFEKGENYKAEKL 506
+PD++TF ++R L + A +L
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRL 425
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 133/286 (46%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D + + R+ + P + F ++ + + A+ L +++ G P++V+ N
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI + +I + ++++ G + + T L+ GLC G+V A ++ +
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
++ YG+L+ LC + +++++ ++ K P + T+++ L K A
Sbjct: 328 RVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+M+ ILP VTFN L+ C +A L +K PD TY++LV
Sbjct: 388 SGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSG 447
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
F KEG+ KE ++ M+ + + P++ TY LMDG + ++ +
Sbjct: 448 FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 116/220 (52%), Gaps = 18/220 (8%)
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGV--TPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+ S +D YC +++ A ++M +R + PNV YNT++NG K +D+AL +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTM-KRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M + P+ TFN LI+G C+S+ D A+ L ++++++G +P+V
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSS---------------KFDLALDLFREMKEKGCEPNV 263
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
++N L+ G G+++ ++ +++ G + T I+++GLC+EG D+A L+
Sbjct: 264 VSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLD 323
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ + +P + +++ L + + +A +++ E+ +G
Sbjct: 324 LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 154/316 (48%), Gaps = 16/316 (5%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
+KP V + ++ SLC V A + + I+PS T++ L+ G+ + A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
+ DEM+ +N D+ YN L+DA CK G V + M G+KP+ ++ + Y
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C +V+ A +L+ M + + PNV ++N +I LCK + VD+A L EM K P+T
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
T+NS I+ Y+ C V++A L+ ++ PD TYN+++ L
Sbjct: 349 WTYNS---------IMAYH------CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLL 393
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC-KEGLFDEALTLLSKMEDNGCMPD 483
GR A E+ + + + + TV TYT+MI+GL K+G +EA M D G P
Sbjct: 394 IRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPY 453
Query: 484 AITFETIIRALFEKGE 499
+ T E + L G+
Sbjct: 454 STTVEMLRNRLVGWGQ 469
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 14/342 (4%)
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
I+ Y + A ++++ G +P L+ LC V A +F
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +Y L+ G ++ + ++ ++ + D++ YN ++D+LCK V
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ ++ EM + + P +F I+ +C G + A +LD M ++ P+VYT+N ++
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK KV +A +L M+++G P+ TY S+M +C EVN+A +L+ M + P+
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+YN ++ L +I D A ++ M + P T+ +I GL +
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR------------ 430
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
K +++A + + D+GI P T +L + L G++
Sbjct: 431 --KKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQM 470
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 145/306 (47%), Gaps = 2/306 (0%)
Query: 70 SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGL 129
+ + +EF GI P + L+ L++ C + + A K G P+ T++ L++G
Sbjct: 160 AFNRMVEF-GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 130 CLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
A + D ++ + ++ ++Y L++ LCK G ++ +++ +KPD
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
+ I + C V A+ + M ++P+V TFN +I C ++ +A LLDE
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M+ K NPD +TYN ++ C +V AT +L+ M + P+ TY ++ +
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK-MVDEALNLFAEMDCKNIVPNTVTFN 368
++A I M +R P V +Y MI+GL + K ++EA F M + I P + T
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVE 458
Query: 369 SLIDGL 374
L + L
Sbjct: 459 MLRNRL 464
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 140/313 (44%), Gaps = 5/313 (1%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
FNR++ P + + ++L SL KH + A + + GI P T +IL+ +
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
+ A V ++L++ + + + L+ LC +G V + + G + S
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
+ I+ C G ++ ++L +++ + P+V +N II +LCK+ V DA+ L EM+
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
P T+NS++ C ++ A LL M PD +TYN+++ + G+
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK---AKYILNSMPQRGVTPNVQSYN 333
AT + M ++ P V TYT ++ G LV + K A M G+ P +
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHG--LVRKKGKLEEACRYFEMMIDEGIPPYSTTVE 458
Query: 334 TMINGLCKIKMVD 346
+ N L +D
Sbjct: 459 MLRNRLVGWGQMD 471
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 15/249 (6%)
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+ I+ A+ + EA M++ G+KP V L+ C VN A+
Sbjct: 141 FWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAK 200
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
G+ P+ ++Y+ ++ G +I+ A +F EM +N C +++
Sbjct: 201 GFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN---------------CVVDLLA 245
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
YN+LLDALCKS VD + +++ + G++PD ++ I + C+ G + +A +V+ +
Sbjct: 246 YNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
V T+ +I LCK D+A LL +M G PD T+ +I+ + E
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 502 KAEKLLREM 510
+A KLL M
Sbjct: 366 RATKLLSRM 374
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 2/264 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I + +F+ +L + ++ + +L +L K + ++ G+ PD +
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
I I+ YC + SA+ VL ++ + PN TF +IK LC N +V A D ++
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G + + +Y +++ C + + +LL +++ PD YN ++ L +
Sbjct: 341 QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFD 400
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCI-VGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A ++ M + P+V T+ +I+G G+L+EA + M+ + I P T +L
Sbjct: 401 RATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Query: 266 VDAFCKEGKVKEATNVLAVMMKQG 289
+ G++ + +VLA M++
Sbjct: 461 RNRLVGWGQM-DVVDVLAGKMERS 483
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
L SE +A N M + G+ P V + +++ LC K V+ A F + IVP+
Sbjct: 153 LPSEACRA---FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK 209
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
T++ L+ G + + DA A + ++ ++ D+ YN L+D LC
Sbjct: 210 TYSILVRGWAR--------IRDA-------SGARKVFDEMLERNCVVDLLAYNALLDALC 254
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ G + ++ Q++ G ++ I I+ C G A +L +M+ +P+
Sbjct: 255 KSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARG 514
TF II+ L + + A LL EM+ +G
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 197/430 (45%), Gaps = 19/430 (4%)
Query: 64 HYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFT 123
H+ A L ++ G P ILI + + + V K+ K G++P +
Sbjct: 173 HFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYN 232
Query: 124 TLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK 183
++ L NG AL ++ G ++ L+ GLCK G+ L++L+++
Sbjct: 233 RIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMREN 292
Query: 184 LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA 243
L KPDV Y +I +L + + + ++ EM I P V+ + +L+ G C G+++
Sbjct: 293 LCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERG 352
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
L EM K I D Y +L++ F +GKV+ A N+ ++ G ++ Y +++ G
Sbjct: 353 YELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKG 412
Query: 304 YCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI-------------NGLCKIKM----VD 346
C V++V+KA + + + P+ ++ + ++ N L +I V
Sbjct: 413 LCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVS 472
Query: 347 EALNLFAEMDCKNIVPNTVTFN--SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
+ L F ++ C + N + + ++ ++ YN L++AL K + K+++L +
Sbjct: 473 DYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYE 532
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
+R G +PD +Y+I + E+G +K A + ++ ++ Y + GLC+ G
Sbjct: 533 MRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGE 592
Query: 465 FDEALTLLSK 474
D + L+ +
Sbjct: 593 IDAVMLLVRE 602
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 219/486 (45%), Gaps = 32/486 (6%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
V ++ ++ + P + + +I+ +LVK ++ A+++ + G+ + T IL+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C +I +L ++ + +P+ +T +IK L G + +L+ D +
Sbjct: 272 GLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ ++YGTL+ GLCK G+ +L +++GK + D +Y +I+ D V A NL+
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
++V + + +N++I G C V Q+ +A L + + + PD T + ++ A+
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK----YILNSMPQRGVTPN 328
++ + +NVL + + G P T C E N YIL + V+
Sbjct: 452 NRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVS-- 508
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN-------------------- 368
YN ++ L K+ + ++L+LF EM P++ +++
Sbjct: 509 --VYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHE 566
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK-IRDQGIQPDVRTYNILMDGLCEE 427
+I+ C +I Y SL LC+ +D + L+++ + + P Y + + +C+
Sbjct: 567 KIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKG 626
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA--I 485
+ +V+ ++ +G + Y +I+G+ K G A + ++++ M +A +
Sbjct: 627 SNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMV 686
Query: 486 TFETII 491
+E ++
Sbjct: 687 VYEEML 692
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 174/424 (41%), Gaps = 58/424 (13%)
Query: 132 NGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVM 191
N A FH +G+ + +Y L + G RA+ QL ++ + P
Sbjct: 136 NDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQ 195
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+ +I + + +Y +M P V +N ++ G A+A+ ++
Sbjct: 196 FEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFK 255
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
+ + T+ ILV CK G+++E +L M + KP+V YT+++ LVSE N
Sbjct: 256 EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK--TLVSEGN 313
Query: 312 --KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ + + M + + P+V +Y T++ GLCK V+ LF EM K I+ + +
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 370 LIDGLCK--------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
LI+G ++I YN+++ LC + VDKA L + ++
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV---------------------- 447
++PD T + +M RL + V++ + GYPV
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 448 ------------TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+V Y I++ L K G ++L+L +M G PD+ ++ I
Sbjct: 494 DVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFV 553
Query: 496 EKGE 499
EKG+
Sbjct: 554 EKGD 557
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/413 (18%), Positives = 184/413 (44%), Gaps = 17/413 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+++++ I R+ P + + ++ +LV + ++ + ++ I PD++
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYG 337
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
L+ C ++ + + ++ K + + LI+G +G+V++A + +V
Sbjct: 338 TLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDS 397
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G+ + Y +I GLC + Q + +L + + ++PD + I+ + ++D
Sbjct: 398 GYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDF 457
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL-LDEMVTKNINPDVYTYNILVD 267
N+ E + P V + + + + K A+AL + ++ + V YNIL++
Sbjct: 458 SNVL-ERIGELGYP-VSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILME 515
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
A K G ++++ ++ M K G +P+ +Y+ + + +V A + + P
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVP 575
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
++ +Y ++ GLC+I +D + L E N+ + F Y +
Sbjct: 576 SIAAYLSLTKGLCQIGEIDAVMLLVREC-LGNVESGPMEFK-------------YALTVC 621
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+CK + +K + ++ ++ +G+ + Y ++ G+ + G +K A+EV +L
Sbjct: 622 HVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTEL 674
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 107/264 (40%), Gaps = 15/264 (5%)
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
K D YN + G + A + +M QG P+ + L+ + +
Sbjct: 152 KGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLR 211
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
Y+ M + G P V YN +++ L K D AL ++ + +V + TF L+
Sbjct: 212 VYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVK 271
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
GLCK+ +++ + +++++R+ +PDV Y ++ L EG L
Sbjct: 272 GLCKAG---------------RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDA 316
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
+ V ++ V Y ++ GLCK+G + L +M+ + D + +I
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIE 376
Query: 493 ALFEKGENYKAEKLLREMMARGLL 516
G+ A L +++ G +
Sbjct: 377 GFVADGKVRSACNLWEDLVDSGYI 400
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 20/224 (8%)
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
AK+ + Q+G + +YN L + A L MD + P+ F LI
Sbjct: 142 AKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR 201
Query: 373 -------GL-------------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
GL K + YN ++DAL K+ + D A+A+ + ++ G+
Sbjct: 202 MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE 261
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
+ T+ IL+ GLC+ GR++ E++Q + V YT MI L EG D +L +
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW 321
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+M + PD + + T++ L + G + +L EM + +L
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 159/351 (45%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I + ++ +S+F++ M + ++ L K +++ + + + +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESL 118
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
LI Y + A V KI + TLI L NG+++ A F D
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
N +S+ LI G A+ ++ ++ V+P VV YN++I LC++ +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A +L +M+ RI P+ VTF L+ G C G+ EA L+ +M + P + Y IL+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
K G++ EA +L M K+ +KP+VV Y L++ C V +A +L M +G
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 358
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
PN +Y MI+G C+I+ D LN+ M P TF ++ GL K
Sbjct: 359 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKG 409
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 16/378 (4%)
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ AL GF + SY +LI L K A Q+LR + + V+ ++ +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
I K V A +++ ++ + + ++ + N+LI G+L++A + D +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+ ++NIL+ F + + A V M++ V+P+VVTY SL+ C ++ KAK
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M ++ + PN ++ ++ GLC +EA L +M+ + C
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG---------------C 287
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
K ++ Y L+ L K +D+A L+ +++ + I+PDV YNIL++ LC E R+ A
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
V+ ++ KG TY +MI+G C+ FD L +L+ M + P TF ++ L
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 496 EKGENYKAEKLLREMMAR 513
KG N + E+M +
Sbjct: 408 -KGGNLDHACFVLEVMGK 424
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 183/418 (43%), Gaps = 17/418 (4%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
LT L +++ A+SL HQ + G D + + LI + +L + +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+ F LI+ G V A+ + + S TLIN L G+ +
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+ ++P+ V +N +I A ++ EM+ M + PSVVT+NSLI
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
C + +A +LL++M+ K I P+ T+ +L+ C +G+ EA ++ M +G KP +
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
V Y LM +++AK +L M +R + P+V YN ++N LC V EA + E
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
M K CK N TY ++D C+ D + ++ + P
Sbjct: 352 MQMKG---------------CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTP 396
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC--KEGLFDEALT 470
T+ ++ GL + G L +A V++ + K + +++ LC G++ EAL+
Sbjct: 397 ATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALS 454
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 146/312 (46%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+VD + +F+++ I ++ LV A S + + P+ V+ N
Sbjct: 131 SVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN 190
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI + + +A V ++L+ QP+ +T+ +LI LC N + A + ++ +
Sbjct: 191 ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKK 250
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
N +++G L+ GLC G+ + +L+ +E + KP +V Y ++ L K + +A
Sbjct: 251 RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEA 310
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L EM RI P VV +N L+ C ++ EA +L EM K P+ TY +++D
Sbjct: 311 KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDG 370
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC+ NVL M+ P T+ ++ G ++ A ++L M ++ ++
Sbjct: 371 FCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFG 430
Query: 329 VQSYNTMINGLC 340
++ +++ LC
Sbjct: 431 SGAWQNLLSDLC 442
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
S F+ M P + F ++ + + A + ++ + P +VT N LI
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
C + A S+L ++KK +PN +TF L+KGLC G+ A + + +G
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
++YG L++ L K G+ + LL +++ + +KPDVV+YN +++ LC + V +A+ + +E
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTE 351
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M P+ T+ +I GFC + + +L+ M+ P T+ +V K G
Sbjct: 352 MQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGN 411
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
+ A VL VM K+ + + +L+ C+
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 20/294 (6%)
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+EA++L + D +Y+ L+ K +L ++ + V+ + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ Y V+KA + + + +QS NT+IN L +++A + F +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 361 VPNTVTFNSLIDGL---------CK-----------SNIITYNSLLDALCKSHHVDKAIA 400
PN+V+FN LI G CK +++TYNSL+ LC++ + KA +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
L++ + + I+P+ T+ +LM GLC +G A++++ D+ +G + Y I+++ L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
K G DEA LL +M+ PD + + ++ L + +A ++L EM +G
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 21/363 (5%)
Query: 157 YGTLINGLCKMGQTRASLQL---LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
Y +++ L KM Q A L +RK +L++P+ ++ ++ +V A +
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLD 207
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
EM P F L+ C G +K+A L ++M + ++ + L+ +C+ G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVG 266
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K+ EA VL M + G +P++V YT+L+ GY ++ A +L M +RG PN Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
+I LCK+ ++EA+ +F EM+ C+++++TY +L+ CK
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYE---------------CEADVVTYTALVSGFCKWG 371
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+DK ++ + +G+ P TY +M ++ + E+++ + Y + Y
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
++I CK G EA+ L ++ME+NG P TF +I L +G +A +EM+ R
Sbjct: 432 VVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTR 491
Query: 514 GLL 516
GL
Sbjct: 492 GLF 494
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 208/440 (47%), Gaps = 20/440 (4%)
Query: 59 LVKMKHYSTAISLSHQLEFTG---ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGY 115
L KM+ + L ++ I P++ +L+ + + A VL ++ K G+
Sbjct: 157 LSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAIEVLDEMPKFGF 214
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+P+ F L+ LC +G V+ A + + + + F +N + +L+ G C++G+ +
Sbjct: 215 EPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKY 273
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
+L ++ +PD+V Y ++ + DA++L +M P+ + LI C
Sbjct: 274 VLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
V +++EA+ + EM DV TY LV FCK GK+ + VL M+K+G+ P+ +
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
TY +M + + ++ M Q P++ YN +I CK+ V EA+ L+ EM
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
Query: 356 DCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
+ + P TF +I+GL + LL+A H + + + G
Sbjct: 454 EENGLSPGVDTFVIMINGLA-----SQGCLLEA--SDHFKEMVTRGLFSVSQYG------ 500
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSK 474
T +L++ + ++ +L+ A++V + +KG + V ++TI I+ L +G EA + +
Sbjct: 501 TLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIE 560
Query: 475 MEDNGCMPDAITFETIIRAL 494
M + MP TF +++ L
Sbjct: 561 MIEMDFMPQPDTFAKLMKGL 580
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 134/300 (44%), Gaps = 5/300 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I+++ +L+ + A L + G P+ +LI C ++ A V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ + + + +T+T L+ G C G++ D ++ +G ++++Y ++ K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
L+L+ K+ PD+ +YN +I CK V +A L++EM + P V T
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNIN--PDVYTYNILVDAFCKEGKVKEATNVLAV 284
F +I G G L EA EMVT+ + T +L++ K+ K++ A +V +
Sbjct: 465 FVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSC 524
Query: 285 MMKQGV-KPNVVTYTSLMDG-YCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ +G + NV+++T + + E Y + M + P ++ ++ GL K+
Sbjct: 525 ITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIE-MIEMDFMPQPDTFAKLMKGLKKL 583
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 50/363 (13%)
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G QPNT F L+K C NG + A +V + + ISY
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAF-----LVVEEMKRSGISY---------------- 229
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR-ILPSVVTFNSLIY 232
P+ + Y+T++D L + +A L+ +M++ I P VTFN +I
Sbjct: 230 -------------PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMIN 276
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
GFC G+++ A +LD M NP+VY Y+ L++ FCK GK++EA + K G+K
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+ V YT+LM+ +C E ++A +L M + +YN ++ GL +EAL +
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQML 396
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
+ + + N +Y +L+ALC + ++KA+ + + ++GI P
Sbjct: 397 DQWGSEGVHLNKG---------------SYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
T+N L+ LCE G + V+ L G +++ ++ +CKE LL
Sbjct: 442 HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Query: 473 SKM 475
+
Sbjct: 502 DSL 504
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 146/279 (52%), Gaps = 17/279 (6%)
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN-PDVYTYNILVDAFCKEGKVKEATN 280
P+ FN L+ C G + A +++EM I+ P+ TY+ L+D + KEA
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 281 VLAVMM-KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
+ M+ K+G+ P+ VT+ +++G+C EV +AK IL+ M + G PNV +Y+ ++NG
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAI 399
CK+ + EA F E+ + +TV Y +L++ C++ D+A+
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVG---------------YTTLMNCFCRNGETDEAM 358
Query: 400 ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGL 459
L+ +++ + D TYN+++ GL EGR + A +++ ++G + +Y I++N L
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Query: 460 CKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
C G ++A+ LS M + G P T+ ++ L E G
Sbjct: 419 CCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 146/270 (54%), Gaps = 2/270 (0%)
Query: 74 QLEFTGIT-PDIVTLNILINCYCHQAQITSAFSVLAKIL-KKGYQPNTITFTTLIKGLCL 131
+++ +GI+ P+ +T + L++C ++ A + ++ K+G P+ +TF +I G C
Sbjct: 221 EMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR 280
Query: 132 NGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVM 191
G+V+ A + D + G + N +Y L+NG CK+G+ + + Q +++ +K D V
Sbjct: 281 AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
Y T+++ C++ +A L EM A R +T+N ++ G G+ +EA+ +LD+
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
++ ++ + +Y I+++A C G++++A L+VM ++G+ P+ T+ L+ C
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTE 460
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
+L + G+ P +S+ ++ +CK
Sbjct: 461 IGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 135/256 (52%), Gaps = 22/256 (8%)
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
N+L+D+ G+V + +L G++PN + L+ +C ++N A ++ M
Sbjct: 168 NLLIDS----GEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMK 223
Query: 322 QRGVT-PNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGLCKSNI 379
+ G++ PN +Y+T+++ L EA+ LF +M K I P+ VTFN +I+G C++
Sbjct: 224 RSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAG- 282
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
V++A ++ ++ G P+V Y+ LM+G C+ G+++ A++ +
Sbjct: 283 --------------EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDE 328
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ G + YT ++N C+ G DEA+ LL +M+ + C D +T+ I+R L +G
Sbjct: 329 VKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGR 388
Query: 500 NYKAEKLLREMMARGL 515
+ +A ++L + + G+
Sbjct: 389 SEEALQMLDQWGSEGV 404
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 103/223 (46%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V+ I + + + P + + ++ K+ A +++ TG+ D V
Sbjct: 284 VERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTT 343
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+NC+C + A +L ++ + +T+T+ +++GL G+ + ALQ D ++G
Sbjct: 344 LMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEG 403
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
HLN+ SY ++N LC G+ +++ L + + + P +N ++ LC+
Sbjct: 404 VHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGV 463
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
+ + + ++P ++ +++ C +L LLD +V+
Sbjct: 464 RVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 5/247 (2%)
Query: 32 DVVSIFNRLLR---MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+ V +F ++ +SP P + F ++ + A + ++ G P++ +
Sbjct: 250 EAVELFEDMISKEGISPDP--VTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYS 307
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
L+N +C +I A ++ K G + +T+ +TTL+ C NG+ A++ + A
Sbjct: 308 ALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKAS 367
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++Y ++ GL G++ +LQ+L + + V + Y I+++LC + + A
Sbjct: 368 RCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKA 427
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
S M I P T+N L+ C G + + +L + + P ++ +V++
Sbjct: 428 VKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVES 487
Query: 269 FCKEGKV 275
CKE K+
Sbjct: 488 ICKERKL 494
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 211/459 (45%), Gaps = 49/459 (10%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V+ V ++F+RL S +P +L S+ K +LS L +
Sbjct: 100 SVELVHALFDRL---SSSP------MLLHSVFKWAEMKPGFTLSPSL-----------FD 139
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTI---TFTTLIKGLCLNGQVQTALQF---- 141
++N C + A+S++ ++ N + TF LI+ G VQ A++
Sbjct: 140 SVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFA 199
Query: 142 --HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVK---PDVVMYNTII 196
++ V L + L++ LCK G R + L +I G + P V ++N ++
Sbjct: 200 RSYEPVCKSATELRLLE--VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILL 257
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
+ + + A L+ EM AM + P+VVT+ +LI G+C + +++ A+ +L+EM +
Sbjct: 258 NGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME 317
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
+ +N ++D + G++ EA ++ P +VTY SL+ +C ++ A I
Sbjct: 318 INFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
L M RGV P +YN K +E +NL+ + LI+
Sbjct: 378 LKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFK---------------LIEAGHS 422
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
+ +TY+ +L LC+ + A+ + K+++++GI PD+ T +L+ LC L+ A E
Sbjct: 423 PDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEE 482
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+ + +G T+ ++ NGL +G+ D A L S M
Sbjct: 483 FDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 156/309 (50%), Gaps = 3/309 (0%)
Query: 87 LNILINCYCHQAQITSAFSVLAKI---LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
L +L++ C + + A L +I + + P+ F L+ G + +++ A + +
Sbjct: 215 LEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWE 274
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
+ A ++YGTLI G C+M + + ++++L +++ ++ + +++N IID L +
Sbjct: 275 EMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAG 334
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+++A + P++VT+NSL+ FC G L A +L M+T+ ++P TYN
Sbjct: 335 RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYN 394
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
F K K +E N+ +++ G P+ +TY ++ C +++ A + M R
Sbjct: 395 HFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNR 454
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
G+ P++ + +I+ LC+++M++EA F + I+P +TF + +GL +
Sbjct: 455 GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMA 514
Query: 384 SLLDALCKS 392
L +L S
Sbjct: 515 KRLSSLMSS 523
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 196/460 (42%), Gaps = 52/460 (11%)
Query: 70 SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGL 129
SL L+ TGI P + ++ L + + + A+ +K G+ + F +++ L
Sbjct: 87 SLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAE-MKPGFTLSPSLFDSVVNSL 145
Query: 130 CLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
C + + A V N +S T I + + + Q +R E
Sbjct: 146 CKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE-------- 197
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
+ + +CK +R+L L+ C G ++EA L+
Sbjct: 198 --FARSYEPVCKSA------------TELRLL------EVLLDALCKEGHVREASMYLER 237
Query: 250 M---VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
+ + N P V +NIL++ + + K+K+A + M VKP VVTY +L++GYC
Sbjct: 238 IGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCR 297
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ V A +L M + N +N +I+GL + + EAL + P VT
Sbjct: 298 MRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVT 357
Query: 367 FNSLIDGLCKSNII--------------------TYNSLLDALCKSHHVDKAIALIKKIR 406
+NSL+ CK+ + TYN K + ++ + L K+
Sbjct: 358 YNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLI 417
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
+ G PD TY++++ LCE+G+L A +V +++ +G + T T++I+ LC+ + +
Sbjct: 418 EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLE 477
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
EA G +P ITF+ I L KG + A++L
Sbjct: 478 EAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 164/336 (48%), Gaps = 27/336 (8%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAM---RILPSVVTFNSLIYGFCIVGQLKEAIALL 247
+++++++SLCK A++L + V L S TF LI + G +++AI
Sbjct: 137 LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 248 D-----EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM---MKQGVKPNVVTYTS 299
+ E V K+ ++ +L+DA CKEG V+EA+ L + M P+V +
Sbjct: 197 EFARSYEPVCKSAT-ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
L++G+ ++ +A+ + M V P V +Y T+I G C+++ V A+ + EM
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 360 IVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
+ N + FN +IDGL ++ ++ +A+ ++++ P + TYN
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLS---------------EALGMMERFFVCESGPTIVTYNS 360
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L+ C+ G L A ++++ ++T+G T TY K +E + L K+ + G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
PD +T+ I++ L E G+ A ++ +EM RG+
Sbjct: 421 HSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 125/285 (43%), Gaps = 3/285 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + F +L + + A L +++ + P +VT LI YC ++ A V
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ + N + F +I GL G++ AL + ++Y +L+ CK
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + ++L+ + + V P YN K + NLY +++ P +T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++ ++ C G+L A+ + EM + I+PD+ T +L+ C+ ++EA +
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKY---ILNSMPQRGVTPN 328
++G+ P +T+ + +G + AK +++S+P PN
Sbjct: 488 RRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN 532
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 189/402 (47%), Gaps = 21/402 (5%)
Query: 44 SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA 103
SP P + +++ K++ + A L ++ + I T ILI Y + A
Sbjct: 150 SPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEA 205
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
++ G P+ I F+ +I L + A F D + F + I Y L+ G
Sbjct: 206 VHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRG 264
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
C+ G+ + ++ ++++ ++P+V Y+ +ID+LC+ ++ A +++++M+ P+
Sbjct: 265 WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
+TFN+L+ G+ ++ + + ++M PD TYN L++A C++ ++ A VL
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLN 384
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M+K+ + N T+ ++ +VN A + + M + PN +YN ++ K
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSK 444
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIK 403
D L + EMD K + P N+ TY L+ C H + A L K
Sbjct: 445 STDMVLKMKKEMDDKEVEP---------------NVNTYRLLVTMFCGMGHWNNAYKLFK 489
Query: 404 K-IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
+ + ++ + P + Y +++ L G+LK +E+++ ++ KG
Sbjct: 490 EMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 16/319 (5%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
YN +ID K A++L M + + S+ TF LI + G EA+ + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
PD ++I++ ++ + EA + + K +P+V+ YT+L+ G+C E++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+A+ + M G+ PNV +Y+ +I+ LC+ + A ++FA+M +
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADM---------------L 317
Query: 372 DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
D C N IT+N+L+ K+ +K + + +++ G +PD TYN L++ C + L+
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
NA +V+ ++ K V T+ + + K+ + A + SKM + C P+ +T+ ++
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Query: 492 RALFEKGENYKAEKLLREM 510
R K+ +EM
Sbjct: 438 RMFVGSKSTDMVLKMKKEM 456
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P +I + ++ + S A + +++ GI P++ T +I+I+ C QI+ A V
Sbjct: 253 PDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDV 312
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
A +L G PN ITF L++ G+ + LQ ++ + G + I+Y LI C+
Sbjct: 313 FADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCR 372
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
++++L + K + + +NTI + K V A +YS+M+ + P+ VT
Sbjct: 373 DENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVT 432
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N L+ F + + EM K + P+V TY +LV FC G A + M+
Sbjct: 433 YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMV 492
Query: 287 KQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
++ + P++ Y ++ ++ K + ++ M Q+G+
Sbjct: 493 EEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+N +I V Q A L+D M ++N+ + T+ IL+ + + G EA + M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
G P+ + ++ ++ ++A+ +S+ R P+V Y ++ G C+ +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA +F EM I PN + TY+ ++DALC+ + +A + +
Sbjct: 273 EAEKVFKEMKLAGIEPN---------------VYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
D G P+ T+N LM + GR + +V + G TY +I C++ +
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
A+ +L+ M C +A TF TI R + +K + A ++ +MM
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMM 422
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 151/312 (48%), Gaps = 42/312 (13%)
Query: 197 DSLCKDTLVTDAFNL-YSEMVAMRILPSVVTFNSLIYGFCIV---GQLKEAIALLDEMVT 252
D++ +L A +L +S++ ++ PSVV C++ G ++ I L +
Sbjct: 85 DAILNPSLTLHALSLDFSQIETSQVSPSVVR--------CVIEKCGSVRHGIPLHQSLAF 136
Query: 253 KNI--------NPDVYTYNILVDAFCKEGKVKE---ATNVLAVMMKQGVKPNVVTYTSLM 301
N + + YN ++D GKV++ A +++ +M + V+ ++ T+T L+
Sbjct: 137 FNWATSRDDYDHKSPHPYNEMIDL---SGKVRQFDLAWHLIDLMKSRNVEISIETFTILI 193
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
Y ++A + N M G P+ +++ +I+ L + + EA + F
Sbjct: 194 RRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF--------- 244
Query: 362 PNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
+SL D + ++I Y +L+ C++ + +A + K+++ GI+P+V TY+I++
Sbjct: 245 ------DSLKDRF-EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI 297
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
D LC G++ A +V D+L G T+ ++ K G ++ L + ++M+ GC
Sbjct: 298 DALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
Query: 482 PDAITFETIIRA 493
PD IT+ +I A
Sbjct: 358 PDTITYNFLIEA 369
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y ++D V + + A ++++ M R V +++++ +I + + EA++ F M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
VP+ + F+ +I L + +A + ++D+ +PDV
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKR---------------RASEAQSFFDSLKDR-FEPDVIV 257
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
Y L+ G C G + A++V +++ G V TY+I+I+ LC+ G A + + M
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 477 DNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
D+GC P+AITF ++R + G K ++ +M G
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+F +L P I F ++ VK + + +Q++ G PD +T N LI +C
Sbjct: 312 VFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHC 371
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ +A VL ++KK + N TF T+ + + V A + + ++ N +
Sbjct: 372 RDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTV 431
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y L+ T L++ ++++ K V+P+V Y ++ C +A+ L+ EM
Sbjct: 432 TYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEM 491
Query: 216 VAMRIL-PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
V + L PS+ + ++ GQLK+ L+++M+ K +
Sbjct: 492 VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
YN ++D K D A LI ++ + ++ + T+ IL+ G A +
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
G ++I+I+ L ++ EA + ++D PD I + ++R GE
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 502 KAEKLLREMMARGL 515
+AEK+ +EM G+
Sbjct: 273 EAEKVFKEMKLAGI 286
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 193/403 (47%), Gaps = 25/403 (6%)
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y P+ + +++ + Q A D + + ++ +Y TLI K G ++L
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 175 QLLRKIEGKLVKPDVVMYNTIID---SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
L+K+E V D+V+Y+ +I+ LC + A +++S + I P +V +NS+I
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ +EA L+ EM + P+ +Y+ L+ + + K EA +V A M +
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
++ T ++D Y + V +A + S+ + + PNV SYNT++ + ++ EA++L
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHL 387
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
F M K+I + N++TYN+++ K+ +KA L+++++ +GI+
Sbjct: 388 FRLMQRKDI---------------EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIE 432
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
P+ TY+ ++ + G+L A + Q L + G + Y MI + GL A L
Sbjct: 433 PNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL 492
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
L +++ +PD I ET I L + G +A + R+ G
Sbjct: 493 LHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESG 531
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 208/500 (41%), Gaps = 81/500 (16%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP + + +L ++++ K + A L ++ + PD T + LI + + SA S
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
L K+ + + + ++ LI+ L LC
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIE--------------------------------LSRRLC 239
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ ++ + +++ + PD+V YN++I+ K L +A L EM +LP+ V
Sbjct: 240 DYSK---AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTV 296
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
++++L+ + + EA+++ EM N D+ T NI++D + + VKEA + +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
K ++PNVV+Y +++ Y +A ++ M ++ + NV +YNTMI K
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
++A NL EM + I PN ITY++++ K+ +D+A L +K+
Sbjct: 417 EKATNLVQEMQSRGIEPNA---------------ITYSTIISIWGKAGKLDRAATLFQKL 461
Query: 406 RDQGIQPDVRTYNILMDG-------------------------------LCEEGRLKNAQ 434
R G++ D Y ++ L + GR + A
Sbjct: 462 RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEAT 521
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
V + G + + MIN + + + + KM G PD+ ++ A
Sbjct: 522 WVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 495 FEKGENYKAEKLLREMMARG 514
++ E KA+ + REM G
Sbjct: 582 GKQREFEKADTVYREMQEEG 601
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 212/454 (46%), Gaps = 21/454 (4%)
Query: 65 YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTT 124
YS AIS+ +L+ +GITPD+V N +IN Y A ++ ++ + G PNT++++T
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 125 LIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL 184
L+ N + AL + L+ + +I+ ++ + + +L +
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++P+VV YNTI+ + L +A +L+ M I +VVT+N++I + + ++A
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKAT 420
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
L+ EM ++ I P+ TY+ ++ + K GK+ A + + GV+ + V Y +++ Y
Sbjct: 421 NLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
V + AK +L+ + P+ T I L K +EA +F +
Sbjct: 481 ERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQ---------- 526
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
F S G K +I + +++ ++ I + +K+R G PD ++++
Sbjct: 527 -AFES---GEVK-DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
++ + A V +++ +G + M++ + F+ +L ++E + + ++
Sbjct: 582 GKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNV-NS 640
Query: 485 ITFETIIRALFEKGENYK-AEKLLREMMARGLLE 517
++ AL+E+ + A +++ M RG+L+
Sbjct: 641 KELHLVVAALYERADKLNDASRVMNRMRERGILK 674
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + +F L +M P ++ + IL + + + AI L ++ I ++VT N
Sbjct: 346 VKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNT 405
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I Y + A +++ ++ +G +PN IT++T+I G++ A + + G
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
++Q+ Y T+I ++G + +LL ++ KL PD + T I L K +A
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHEL--KL--PDNIPRETAITILAKAGRTEEAT 521
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++ + + + F +I + + I + ++M T PD ++++A+
Sbjct: 522 WVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Query: 270 CKEGKVKEATNVLAVMMKQG-VKPNVVTYTSL 300
K+ + ++A V M ++G V P+ V + L
Sbjct: 582 GKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 218/502 (43%), Gaps = 56/502 (11%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
V S+ + R + + T+L ++Y A+S ++ G TP + N +I
Sbjct: 461 VESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIK 520
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
C + I S++ I + + P+ T+ ++ LC A D + G
Sbjct: 521 CLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
Y ++I L K G+ + + K+ ++PD + Y +I++ ++ + +A L
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
E+V + PS T+ LI GF +G +++ LD+M+ ++P+V Y L+ F K+
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC----------LVSEVNKAKYI------ 316
G K + + +M + +K + + Y +L+ G ++ E K K +
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 317 --LNSMP-------------------QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
L S+P ++ + PN+ +NT+I G C +DEA N M
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 356 DCKNIVPNTVTFN----------------SLIDGL-CKSNIITYNSLLDALCKSHHVDKA 398
+ IVPN VT+ L +G C+ + + Y++LL LC A
Sbjct: 821 QKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMIN 457
+AL+ +++ GI P+ +Y L+ LC A +V++D+ +P ++ +T +I
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSI-NHTWLIY 939
Query: 458 GLCKEGLFDEALTLLSKMEDNG 479
LC+E EA L + M +G
Sbjct: 940 ILCEEKKLREARALFAIMVQSG 961
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 221/480 (46%), Gaps = 30/480 (6%)
Query: 59 LVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPN 118
LVK++ + A + ++ +G P + +++++ C+Q + AF ++ ++G
Sbjct: 141 LVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLW 200
Query: 119 TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS-YGTLINGLCKMGQTRASLQLL 177
L KGLC +G + A+ D + ++ Y +L CK G + L
Sbjct: 201 LWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALF 260
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
+E D VMY ++ CKD +T A LY MV FN+LI+GF +
Sbjct: 261 DHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKL 320
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA-VMMKQGVKPNVVT 296
G L + + +M+ K + +V+TY+I++ ++CKEG V A + + + NV
Sbjct: 321 GMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHC 380
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
YT+L+ G+ ++KA +L M G+ P+ +Y ++ L K + A+ +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL---- 436
Query: 357 CKNIVPNTVTFN-SLIDGLCKSNI-ITYNSLLD-------------------ALCKSHHV 395
++I+ N N +ID L NI + SLL ALC +
Sbjct: 437 -QSILDNGCGINPPVIDDL--GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNY 493
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
A++ I+K+ + G P +YN ++ L +E +++ ++ + + V TY I+
Sbjct: 494 IAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIV 553
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+N LCK+ D A ++ ME+ G P + +II +L ++G +AE+ +M+ G+
Sbjct: 554 VNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGI 613
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 188/452 (41%), Gaps = 55/452 (12%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D+ S+ N + + P + + ++ L K A ++ +E G+ P + +
Sbjct: 528 IEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSS 587
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I Q ++ A AK+L+ G QP+ I + +I NG++ A + + VV
Sbjct: 588 IIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHF 647
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ +Y LI+G KMG Q L K+ + P+VV+Y +I K +F
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE-------------------- 249
L+ M I + + +L+ G K+ ++ E
Sbjct: 708 TLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIP 767
Query: 250 -----------------MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
V K+I P++Y +N ++ +C G++ EA N L M K+G+ P
Sbjct: 768 SSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
N+VTYT LM + ++ A ++ P+ Y+T++ GLC K +AL L
Sbjct: 828 NLVTYTILMKSHIEAGDIESA---IDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALM 884
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
EM I PN +Y LL LC S +A+ ++K + I P
Sbjct: 885 LEMQKSGINPNKD---------------SYEKLLQCLCYSRLTMEAVKVVKDMAALDIWP 929
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
+ L+ LCEE +L+ A+ + ++ G
Sbjct: 930 RSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 198/465 (42%), Gaps = 45/465 (9%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ-F 141
D N LI+ + + + ++++KKG Q N T+ +I C G V AL+ F
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY--------- 192
++ ++ N Y LI G K G ++ LL ++ + PD + Y
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 193 -----------NTIIDSLC--KDTLVTDAFN-------LYSEMVAMRILPSVVTFNSLIY 232
+I+D+ C ++ D N L E+ + V +
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
C A++ +++MV P ++YN ++ +E +++ +++ ++ + P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+V TY +++ C ++ + A I+++M + G+ P V Y+++I L K V EA F
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
A+M I P+ I Y +++ ++ +D+A L++++ ++P
Sbjct: 606 AKMLESGIQPDE---------------IAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
TY +L+ G + G ++ + + +L G V YT +I K+G F + TL
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF 710
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
M +N D I + T++ L+ K +++ E LL+
Sbjct: 711 GLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 176/453 (38%), Gaps = 87/453 (19%)
Query: 132 NGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL-RKIEGKLVKPDVV 190
+ + A D V G L+ YG LI L +MGQ + +++ G + PD
Sbjct: 73 SSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSS 132
Query: 191 MYNT-----------------------------------IIDSLCKDTLVTDAFNLYSEM 215
+ ++ ++D LC +AF+ + ++
Sbjct: 133 VLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQV 192
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP-DVYTYNILVDAFCKEGK 274
+ L G C G L EAI +LD + P V Y L FCK G
Sbjct: 193 KERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGC 252
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
EA + M G + V YT LM YC + + A + M +R + +NT
Sbjct: 253 AAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNT 312
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------- 377
+I+G K+ M+D+ +F++M K + N T++ +I CK
Sbjct: 313 LIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 378 ----NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
N+ Y +L+ K +DKA+ L+ ++ D GI PD TY +L+ L + LK A
Sbjct: 373 DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Query: 434 QEVIQDLLTKG-------------YPVTVRT----------------YTIMINGLCKEGL 464
++Q +L G V V + ++ LC +
Sbjct: 433 MVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRN 492
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
+ AL+ + KM + GC P ++ ++I+ LF++
Sbjct: 493 YIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/534 (24%), Positives = 236/534 (44%), Gaps = 62/534 (11%)
Query: 37 FNRLLRM--------SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+ R+LR+ S P +I + +L +L + + ++ G+ P T
Sbjct: 125 WERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYG 184
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+L++ Y + A + + ++ + P+ +T T+++ +G+ A +F A
Sbjct: 185 MLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAG 244
Query: 149 GFHLNQISYGTLINGLCKMGQTRA--------SLQLLR-----KIEGKL----------V 185
L+ S I+ K G ++ S++L + IE L
Sbjct: 245 KVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPR 300
Query: 186 KPDVV-MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
KP + +NT+ID K + DA NL+SEM+ + VTFN++I+ G L EA
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
+LL +M K I+PD TYNIL+ G ++ A + K G+ P+ VT+ +++
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA--EMDCKNIVP 362
C V + + ++ M + + + S ++ +V +A LF ++DC V
Sbjct: 421 CQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDC---VL 477
Query: 363 NTVTFNSLID-----GLC----------------KSNIITYNSLLDALCKSHHVDKAIAL 401
++ T ++ID GL +++++ YN ++ A K+ +KA++L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 402 IKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK 461
K +++QG PD TYN L L + AQ ++ ++L G +TY MI +
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 462 EGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
GL +A+ L ME G P+ + + ++I E G +A + R M G+
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 208/486 (42%), Gaps = 22/486 (4%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++D ++F+ +L+ + F ++ + H S A SL ++E GI+PD T N
Sbjct: 320 RLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYN 379
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
IL++ + I +A KI K G P+T+T ++ LC V +
Sbjct: 380 ILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRN 439
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+++ S ++ G + L + + V + +ID + L +A
Sbjct: 440 SIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTL-AAVIDVYAEKGLWVEA 498
Query: 209 FNLY---SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
++ M R V+ +N +I + ++A++L M + PD TYN L
Sbjct: 499 ETVFYGKRNMSGQR--NDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSL 556
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
V EA +LA M+ G KP TY +++ Y + ++ A + +M + GV
Sbjct: 557 FQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGV 616
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
PN Y ++ING + MV+EA+ F M+ + +SN I SL
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV---------------QSNHIVLTSL 661
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ A K +++A + K++D PDV N ++ + G + A+ + L KG
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG- 720
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
V ++ M+ G+ DEA+ + +M ++G + D +F ++ G+ + +
Sbjct: 721 TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCE 780
Query: 506 LLREMM 511
L EM+
Sbjct: 781 LFHEML 786
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 184/430 (42%), Gaps = 17/430 (3%)
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
T N LI+ Y ++ A ++ +++LK G +T+TF T+I +G + A +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+G + +Y L++ G A+L+ RKI + PD V + ++ LC+ +V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+ + +EM I + ++ + G + +A AL + + T +
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLAAV 485
Query: 266 VDAFCKEGKVKEATNVL-AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
+D + ++G EA V G + +V+ Y ++ Y KA + M +G
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
P+ +YN++ L + +VDEA + AEM +D CK TY +
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEM---------------LDSGCKPGCKTYAA 590
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
++ + + + A+ L + + G++P+ Y L++G E G ++ A + + + G
Sbjct: 591 MIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
T +I K G +EA + KM+D+ PD +++ + G +AE
Sbjct: 651 VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAE 710
Query: 505 KLLREMMARG 514
+ + +G
Sbjct: 711 SIFNALREKG 720
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 175/395 (44%), Gaps = 21/395 (5%)
Query: 119 TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
T TF TLI G++ A ++ G ++ +++ T+I+ G + LL+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 179 KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
K+E K + PD YN ++ + A Y ++ + + P VT ++++ C
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+ E A++ EM +I D ++ +++ + EG V +A + V + T
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLA 483
Query: 299 SLMDGYC---LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
+++D Y L E Y +M G +V YN MI K K+ ++AL+LF M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMS--GQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 356 DCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
+ P+ T+NSL L ++ VD+A ++ ++ D G +P +
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDL---------------VDEAQRILAEMLDSGCKPGCK 586
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
TY ++ G L +A ++ + + G Y +ING + G+ +EA+ M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
E++G + I ++I+A + G +A ++ +M
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM 681
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 204/454 (44%), Gaps = 35/454 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+++ + + ++ ++ P + +L L + K + ++ +++ I D ++
Sbjct: 390 DIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVP 449
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLI---------KGLCLNGQVQTAL 139
+++ Y ++ + V AK L + +Q + + +T + KGL V+
Sbjct: 450 VIMQMYVNEGLV-----VQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLW----VEAET 500
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
F+ G + + Y +I K +L L + ++ + PD YN++ L
Sbjct: 501 VFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQML 560
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
LV +A + +EM+ P T+ ++I + +G L +A+ L + M + P+
Sbjct: 561 AGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNE 620
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
Y L++ F + G V+EA +M + GV+ N + TSL+ Y V + +A+ + +
Sbjct: 621 VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK 680
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M P+V + N+M++ + +V EA ++F + K G C ++
Sbjct: 681 MKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREK--------------GTC--DV 724
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
I++ +++ +D+AI + +++R+ G+ D ++N +M +G+L E+ +
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHE 784
Query: 440 LLT-KGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
+L + + T+ + L K G+ EA++ L
Sbjct: 785 MLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQL 818
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 181/407 (44%), Gaps = 20/407 (4%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLA 108
++E+ ++ + K K + A+SL ++ G PD T N L + A +LA
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMG 168
++L G +P T+ +I G + A+ ++ + G N++ YG+LING + G
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 169 QTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFN 228
++Q R +E V+ + ++ ++I + K + +A +Y +M P V N
Sbjct: 635 MVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASN 694
Query: 229 SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
S++ +G + EA ++ + + K DV ++ ++ + G + EA V M +
Sbjct: 695 SMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM-PQRGVTPNVQSYNTMINGLCKIKMVDE 347
G+ + ++ +M Y ++++ + + M +R + + ++ T+ L K + E
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSE 813
Query: 348 ALNLF--AEMDCKNIVPNTVT---FNS-------------LIDGLCKSNIITYNSLLDAL 389
A++ A + K + +T F++ L G YN+++
Sbjct: 814 AVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTY 873
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
S +D A+ +++++G++PD+ T L+ + G ++ + V
Sbjct: 874 SASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/370 (18%), Positives = 132/370 (35%), Gaps = 70/370 (18%)
Query: 78 TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
+G P T +I Y ++ A + + K G +PN + + +LI G +G V+
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
A+Q+ + G N I +LI K+G + ++ K++ PDV N+++
Sbjct: 639 AIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML- 697
Query: 198 SLCKD-----------------------------------TLVTDAFNLYSEMVAMRILP 222
SLC D ++ +A + EM +L
Sbjct: 698 SLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLS 757
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEM-VTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
+FN ++ + GQL E L EM V + + D T+ L K G EA +
Sbjct: 758 DCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQ 817
Query: 282 LAVMMKQG---VKPNVVT------------------------------YTSLMDGYCLVS 308
L + P + Y +++ Y
Sbjct: 818 LQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASG 877
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+++ A M ++G+ P++ + ++ K MV+ + + + + P+ F
Sbjct: 878 DIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFK 937
Query: 369 SLIDGLCKSN 378
++ D +N
Sbjct: 938 AVRDAYVSAN 947
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/295 (18%), Positives = 120/295 (40%), Gaps = 10/295 (3%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ +++++ P + +L+ + S A S+ + L G T D+++
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFAT 729
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQ 148
++ Y + A V ++ + G + +F ++ +GQ+ + FH+ +V +
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVER 789
Query: 149 GFHLNQISYGTLINGLCKMG---QTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
L+ ++ TL L K G + + LQ L P + T+ ++ L
Sbjct: 790 KLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITA--TLFSAM---GLY 844
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A E+ + I +N++IY + G + A+ M K + PD+ T L
Sbjct: 845 AYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYL 904
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
V + K G V+ V + + ++P+ + ++ D Y + + A + M
Sbjct: 905 VGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 208/457 (45%), Gaps = 31/457 (6%)
Query: 65 YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTT 124
Y AI + + G P+ +N++++ + A + I + N +F
Sbjct: 124 YDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR----NFFSFDI 179
Query: 125 LIKGLCLNGQ------VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
+ C G V+ L+ ++ +GF+ N+ +G ++ C+ G + Q++
Sbjct: 180 ALSHFCSRGGRGDLVGVKIVLK---RMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVG 236
Query: 179 KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
+ + V +++ ++ + A +L+++M+ + P++VT+ SLI GF +G
Sbjct: 237 LMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLG 296
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+ EA +L ++ ++ + PD+ N+++ + + G+ +EA V + K+ + P+ T+
Sbjct: 297 MVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFA 356
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
S++ CL + + I + + G ++ + N + N KI AL + + M K
Sbjct: 357 SILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
+ + TY L ALC+ AI + K I + D ++
Sbjct: 414 DFALDCY---------------TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHS 458
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
++D L E G+ A + + + + YP+ V +YT+ I GL + +EA +L M++
Sbjct: 459 AIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEG 518
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G P+ T+ TII L ++ E K K+LRE + G+
Sbjct: 519 GIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 159/342 (46%), Gaps = 5/342 (1%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ R++ P FG+IL + S A + + +GI+ + ++L++ +
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A + K+++ G PN +T+T+LIKG G V A V ++G + +
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIV 318
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+I+ ++G+ + ++ +E + + PD + +I+ SLC ++ F+L +
Sbjct: 319 LCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLC----LSGKFDLVPRI 374
Query: 216 V-AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
+ +VT N L F +G A+ +L M K+ D YTY + + A C+ G
Sbjct: 375 THGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGA 434
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
+ A + +++K+ + +++++D + + N A ++ +V SY
Sbjct: 435 PRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTV 494
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
I GL + K ++EA +L +M I PN T+ ++I GLCK
Sbjct: 495 AIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCK 536
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/401 (19%), Positives = 180/401 (44%), Gaps = 23/401 (5%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G P+ ++ C ++ AF V+ ++ G + ++ L+ G +G+ Q A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ + ++ G N ++Y +LI G +G + +L K++ + + PD+V+ N +I +
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
+ +A +++ + +++P TF S++ C+ G+ L +T I D
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFD-----LVPRITHGIGTD 381
Query: 259 --VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
+ T N+L + F K G A VL++M + + TYT + C A +
Sbjct: 382 FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKM 441
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
+ + + ++ +I+ L ++ + A++LF + + V++ I GL +
Sbjct: 442 YKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR 501
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
+ +++A +L +++ GI P+ RTY ++ GLC+E + +++
Sbjct: 502 AK---------------RIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKI 546
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCK-EGLFDEALTLLSKME 476
+++ + +G + T + + L + G F E ++ K +
Sbjct: 547 LRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWK 587
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 137/300 (45%), Gaps = 5/300 (1%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
V +FN+++++ +P ++ + ++ V + A ++ +++ G+ PDIV N++I+
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
Y + A V + K+ P+ TF +++ LCL+G+ + H + F L
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRI-THGIGTDFDL 384
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
++ L N K+G +L++L + K D Y + +LC+ A +Y
Sbjct: 385 --VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMY 442
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
++ + +++I +G+ A+ L + + DV +Y + + +
Sbjct: 443 KIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRA 502
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT--PNVQ 330
+++EA ++ M + G+ PN TY +++ G C E K + IL Q GV PN +
Sbjct: 503 KRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTK 562
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ +F L + P F IL+SL + ++H + G D+VT N+L
Sbjct: 334 EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLL 390
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
NC+ + A VL+ + K + + T+T + LC G + A++ + ++ +
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK 450
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
HL+ + +I+ L ++G+ ++ L ++ + DVV Y I L + + +A++
Sbjct: 451 HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYS 510
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
L +M I P+ T+ ++I G C + ++ +L E + + + D
Sbjct: 511 LCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 21/246 (8%)
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
+KP V + L++ + +KA + M G PN ++ N M++ K+ +V+ AL
Sbjct: 106 IKPRV--FLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGAL 163
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNII-------------------TYNSLLDALC 390
+F + +N + + + +++ + +L C
Sbjct: 164 EIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCC 223
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
++ V +A ++ + GI V +++L+ G G + A ++ ++ G +
Sbjct: 224 RTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
TYT +I G G+ DEA T+LSK++ G PD + +I G +A K+ +
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSL 343
Query: 511 MARGLL 516
R L+
Sbjct: 344 EKRKLV 349
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 36/350 (10%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
YN +I+SL K ++L +M A ++L S TF + + ++KEAI +M
Sbjct: 131 YNALIESLGKIKQFKLIWSLVDDMKAKKLL-SKETFALISRRYARARKVKEAIGAFHKME 189
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY------C 305
+ +N ++D K V +A V M K+ +P++ +YT L++G+
Sbjct: 190 EFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL 249
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
V EVN+ M G P+V +Y +IN CK K +EA+ F EM+ +N P+
Sbjct: 250 RVDEVNR------EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPH 303
Query: 366 TFNSLIDGLCKSNII--------------------TYNSLLDALCKSHHVDKAIALIKKI 405
F SLI+GL + TYN+L+ A C S ++ A + ++
Sbjct: 304 IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEM 363
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
R +G+ P+ RTY+I++ L R K A EV Q T TV TY IM+ C +
Sbjct: 364 RLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQ---TMSCEPTVSTYEIMVRMFCNKERL 420
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D A+ + +M+ G +P F ++I AL + + +A + EM+ G+
Sbjct: 421 DMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGI 470
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 151/356 (42%), Gaps = 18/356 (5%)
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI 180
TF + + +V+ A+ + GF + + +++ L K + ++ K+
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
+ K +PD+ Y +++ ++ + + EM P VV + +I C +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+EAI +EM +N P + + L++ E K+ +A G TY +L
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ YC + A ++ M +GV PN ++Y+ +++ L +++ EA ++ M C+
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPT 403
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
V TY ++ C +D AI + +++ +G+ P + ++ L
Sbjct: 404 VS------------------TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
+ LC E +L A E ++L G ++ + L EG D+ L+ KM+
Sbjct: 446 ITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
NV D +F+++ + P I + +L + + ++ +++ G PD+V
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 270
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
I+IN +C + A ++ ++ +P+ F +LI GL ++ AL+F + +
Sbjct: 271 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 330
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
GF L +Y L+ C + + + + ++ K V P+ Y+ I+ L + +
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A+ +Y M P+V T+ ++ FC +L AI + DEM K + P ++ ++ L+
Sbjct: 391 AYEVYQ---TMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 447
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKP 292
A C E K+ EA M+ G++P
Sbjct: 448 ALCHENKLDEACEYFNEMLDVGIRP 472
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 147/327 (44%), Gaps = 3/327 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V + + F+++ +F ++L +L K ++ A + +++ PDI + I
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + + + V ++ +G++P+ + + +I C + + A++F + + +
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRN 297
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ + +LINGL + +L+ + + + YN ++ + C + DA+
Sbjct: 298 CKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAY 357
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
EM + P+ T++ +++ + + KEA + M + P V TY I+V F
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMF 414
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
C + ++ A + M +GV P + ++SL+ C +++++A N M G+ P
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPG 474
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMD 356
++ + L D+ +L +MD
Sbjct: 475 HMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 19/192 (9%)
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV---------------- 365
Q+G +YN +I L KIK +L +M K ++
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180
Query: 366 ---TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
F+ + + K +N +LD L KS +V A + K++ + +PD+++Y IL++
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
G +E L EV +++ +G+ V Y I+IN CK ++EA+ ++ME C P
Sbjct: 241 GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKP 300
Query: 483 DAITFETIIRAL 494
F ++I L
Sbjct: 301 SPHIFCSLINGL 312
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 193/424 (45%), Gaps = 41/424 (9%)
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
L+ GY+ + ++ + + +C G + + G +L+Q L++ L + G+
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 171 RASLQLLRKIE--GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY---------------S 213
++L +L +E G + P V Y++++ +L K + A ++
Sbjct: 144 ESALGVLDYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTG 201
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT-KNINPDVYTYNILVDAFCKE 272
++ + LP V N L+ G E + +++ K D ++YNI + F
Sbjct: 202 RVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCW 261
Query: 273 GKVKEATNVLAVMMKQG------VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
G + A ++ M ++ P++ TY SL+ CL + A + + + G
Sbjct: 262 GDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHE 321
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
P+ +Y +I G CK +D+A+ ++ EM VP+T+ +N L+DG K+ +T
Sbjct: 322 PDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVT----- 376
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
+A L +K+ +G++ TYNIL+DGL GR + + DL KG
Sbjct: 377 ----------EACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
V T++I+ LC+EG + A+ L+ +ME G D +T +++ ++G EKL
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 507 LREM 510
++ +
Sbjct: 487 MKHI 490
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 221/517 (42%), Gaps = 41/517 (7%)
Query: 29 NVDDVVSIFNRLLRMSPT------PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITP 82
++D +S+F + S P I + ++ L A+ + +L+ +G P
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D T ILI C ++ A + ++ G+ P+TI + L+ G +V A Q
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ +V +G + +Y LI+GL + G+ A L ++ K D + ++ + LC++
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ A L EM +VT +SL+ GF G+ L+ + N+ P+V +
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Query: 263 NILVDAFCKEGKVKEAT---------NVLAVMMKQG----------VKP---NVVTYTSL 300
N V+A K + K+ + L +M G V P + + +
Sbjct: 503 NAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPY 562
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT-MINGLCKIKMVDEALNLFAEMDCKN 359
MD L + N+ K + + V S++ M+N I + L+L ++
Sbjct: 563 MDQ--LAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKL---- 616
Query: 360 IVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
FN + G+ TYNS++ + K + A ++ ++ + D+ TYN+
Sbjct: 617 ----FEIFNGM--GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNV 670
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
++ GL + GR A V+ L +G + + Y +IN L K DEA L M+ NG
Sbjct: 671 IIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNG 730
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
PD +++ T+I + G+ +A K L+ M+ G L
Sbjct: 731 INPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 220/514 (42%), Gaps = 40/514 (7%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLE-FTGITPDIVT 86
H+ DD R++ +S P + ++L L + S + +L+ D +
Sbjct: 195 HSDDDT----GRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWS 250
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKG------YQPNTITFTTLIKGLCLNGQVQTALQ 140
NI I+ + + +A S+ ++ ++ + P+ T+ +LI LCL G+ + AL
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
D + G + +Y LI G CK + ++++ +++ PD ++YN ++D
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
K VT+A L+ +MV + S T+N LI G G+ + L ++ K D
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
T++I+ C+EGK++ A ++ M +G ++VT +SL+ G+ + + ++ +
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF-------NSLIDG 373
+ + PNV +N + K + D + P+ +F S DG
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQSKDK-------DYTPMFPSKGSFLDIMSMVGSEDDG 543
Query: 374 LCKSNI-------ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP-----DVRTYNILM 421
+ + + +D L +H ++ L R Q ++ DV N +
Sbjct: 544 ASAEEVSPMEDDPWSSSPYMDQL--AHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFL 601
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+G L A ++ + G +T TY M++ K+G F A +L +M +N C
Sbjct: 602 SIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFC 661
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
D T+ II+ L + G A +L + +G
Sbjct: 662 AADIATYNVIIQGLGKMGRADLASAVLDRLTKQG 695
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 37/382 (9%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ D IL++ + SA VL + + G N + +++ L +++ A
Sbjct: 122 GVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLA 181
Query: 139 LQF--------HDHVVAQGFHLNQISY--GTLINGLCKMGQTRASLQ-----LLRKIEG- 182
L +H + +SY GT+ +G RA ++ + K++G
Sbjct: 182 LSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM 241
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM------VAMRILPSVVTFNSLIYGFCI 236
K K D YN I + A +L+ EM P + T+NSLI+ C+
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCL 301
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
G+ K+A+ + DE+ PD TY IL+ CK ++ +A + M G P+ +
Sbjct: 302 FGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y L+DG +V +A + M Q GV + +YN +I+GL + + LF ++
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
K + +TF+ I GL LC+ ++ A+ L++++ +G D+ T
Sbjct: 422 KKGQFVDAITFS--IVGL-------------QLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 417 YNILMDGLCEEGRLKNAQEVIQ 438
+ L+ G ++GR +++++
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLMK 488
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 150/363 (41%), Gaps = 47/363 (12%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I F + L + A+ L ++E G + D+VT++ L+ + Q + ++
Sbjct: 430 ITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKH 489
Query: 110 ILKKGYQPNTITFTTLI--------------------KGLCLN-----------GQVQTA 138
I + PN + + + KG L+ +
Sbjct: 490 IREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEV 549
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR--KIEGKLVKPDVVMYNTII 196
D + +++Q+++ + Q + L R ++E K DV M NT +
Sbjct: 550 SPMEDDPWSSSPYMDQLAH--------QRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFL 601
Query: 197 D---SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK 253
S +L F +++ M + + T+NS++ F G + A +LD+M
Sbjct: 602 SIYLSKGDLSLACKLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFEN 659
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
D+ TYN+++ K G+ A+ VL + KQG ++V Y +L++ + +++A
Sbjct: 660 FCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEA 719
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ + M G+ P+V SYNTMI K + EA M +PN VT ++++D
Sbjct: 720 TQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDY 778
Query: 374 LCK 376
L K
Sbjct: 779 LGK 781
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
YTYN ++ +F K+G + A VL M + ++ TY ++ G + + A +L+
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
+ ++G ++ YNT+IN L K +DEA LF M I P+ +
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPD---------------V 735
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL--MDGLCEEGRLKNAQEV 436
++YN++++ K+ + +A +K + D G P+ T IL + E+ R K A V
Sbjct: 736 VSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFV 794
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ +++S VK ++ TA + Q+ DI T N++I + A +VL ++
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
K+G + + + TLI L ++ A Q DH+ + G + + +SY T+I K G+ +
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ + L+ + P+ V +TI+D L K+
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGKE 782
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/530 (22%), Positives = 231/530 (43%), Gaps = 64/530 (12%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
+P II + ++T K+ A L H+L G+ PD + +I + A
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ------------------------- 140
++ + GY+PN+ TLI G A++
Sbjct: 406 YYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEK 465
Query: 141 --------------FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVK 186
FH+H+ LNQ S+ +L+ K G L LLR+ + +
Sbjct: 466 VGKIDVVPCVLKGSFHNHI-----RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSA 520
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
+ +Y+ +I S + +TDA +Y+ + ++ +++I + ++G+ EA L
Sbjct: 521 FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKL 580
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYC 305
+ + + D ++I+V + K G ++EA +VL +M +Q + P+V + ++ Y
Sbjct: 581 YLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQ 640
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+K +++ + + G+ N + YN +IN + +DE F EM PNTV
Sbjct: 641 KCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTV 700
Query: 366 TFNSLIDGLCKS-------------------NIITYNSLLDALCKSHHVDKAIALIKKIR 406
TFN L+D K+ ++I+YN+++ A K+ + IK ++
Sbjct: 701 TFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQ 760
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
G + YN L+D ++ +++ + +++ + TY IMIN ++G D
Sbjct: 761 FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWID 820
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
E +L +++++G PD ++ T+I+A G +A L++EM R ++
Sbjct: 821 EVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNII 870
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 155/325 (47%), Gaps = 16/325 (4%)
Query: 62 MKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKI-LKKGYQPNTI 120
M +S A L L+ +G+ D + +I++ Y + A SVL + +K P+
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVY 630
Query: 121 TFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQTRA-SLQLLR 178
F +++ + +Q LQ + + G H NQ Y +IN C RA L L
Sbjct: 631 LFRDMLR-IYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVIN-CC----ARALPLDELS 684
Query: 179 KIEGKLVK----PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI-LPSVVTFNSLIYG 233
++++ P+ V +N ++D K L L+ ++A R + V+++N++I
Sbjct: 685 GTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTIIAA 742
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
+ + + M + + YN L+DA+ K+ ++++ ++L M K P+
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
TY +++ Y +++ +L + + G+ P++ SYNT+I MV+EA+ L
Sbjct: 803 HYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVK 862
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSN 378
EM +NI+P+ VT+ +L+ L +++
Sbjct: 863 EMRGRNIIPDKVTYTNLVTALRRND 887
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 185/455 (40%), Gaps = 82/455 (18%)
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISY---GT 159
A+S++ ++L G + LIK LC GFH Q SY T
Sbjct: 176 AYSLILRVL--GRREEWDRAEDLIKELC------------------GFHEFQKSYQVFNT 215
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
+I K G + + + + V+P+V ++ K+ V +A +S M
Sbjct: 216 VIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFG 275
Query: 220 ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
I+ ++S+I + + +A ++D M + + + ++++A+ ++GK++ A
Sbjct: 276 IVCESA-YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAE 334
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
++L M G PN++ Y +L+ GY + ++ A+ + + + G+ P+ SY +MI G
Sbjct: 335 SILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGW 394
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI---------DGLCKS------------- 377
+ +EA + + E+ PN+ +LI DG K+
Sbjct: 395 GRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSS 454
Query: 378 --------------------------------NIITYNSLLDALCKSHHVDKAIALI--K 403
N +++SL+ A K VD + L+ K
Sbjct: 455 ILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREK 514
Query: 404 KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEG 463
K RD + + Y++L+ E G+L +A ++ + + + + MI+ G
Sbjct: 515 KWRDSAFESHL--YHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMG 572
Query: 464 LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
F EA L ++ +G + D I F ++R + G
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAG 607
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 190/436 (43%), Gaps = 60/436 (13%)
Query: 120 ITFTTLIKGLCLNGQ---VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS--- 173
++ T ++ L + G+ V++ L F++ + Q L +++ L +G+ R +
Sbjct: 200 VSDTECVEALVMMGESGFVKSCLYFYEWMSLQEPSLASPRACSVLFTL--LGRERMADYI 257
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT------- 226
L LL + K DV +YN I L DA+ +Y M + + P VT
Sbjct: 258 LLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITT 317
Query: 227 -----------------------------FNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
F L+ FC G +EA+ + EM K I
Sbjct: 318 LRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRS 377
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ YN L+DA+ K ++E + M +G+KP+ TY LMD Y + + + +L
Sbjct: 378 NTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLL 437
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIK-MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
M G+ PNV+SY +I+ + K M D A + F M + P++ +
Sbjct: 438 REMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS---------- 487
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
Y +L+ A S +KA A +++ +GI+P V TY ++D G E+
Sbjct: 488 -----YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
+ +L + T TY +++G K+GL+ EA ++S+ G P +T+ ++ A
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 497 KGENYKAEKLLREMMA 512
G++ K +LL+EM A
Sbjct: 603 GGQDAKLPQLLKEMAA 618
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 190/425 (44%), Gaps = 18/425 (4%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQ-VQTALQF 141
D+ N I+ + A+ V + K P+ +T LI L G+ + +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
+ + +G +Q +G L+ C G +L + ++E K ++ + ++YNT++D+ K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ + L++EM + PS T+N L+ + Q LL EM + P+V +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 262 YNILVDAFCKEGKVKE-ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
Y L+ A+ + K+ + A + M K G+KP+ +YT+L+ Y + KA M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
+ G+ P+V++Y ++++ + + + ++ M + I +T+N+L+DG K +
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+A ++ + G+QP V TYN+LM+ G+ ++++++
Sbjct: 572 I---------------EARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM 616
Query: 441 LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
TY+ MI + F A M +G +PD ++E +RA+ E
Sbjct: 617 AALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEK-LRAILEDKAK 675
Query: 501 YKAEK 505
K K
Sbjct: 676 TKNRK 680
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 187/410 (45%), Gaps = 17/410 (4%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAI-SLSHQLEFTGITPDIVT 86
DD ++ + +++ P + ++T+L K + + + ++ G+
Sbjct: 287 QRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV 346
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
L+ +C + A + ++ KKG + NTI + TL+ + ++ +
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G + +Y L++ + Q LLR++E ++P+V Y +I + + ++
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 207 D-AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
D A + + M + + PS ++ +LI+ + + G ++A A +EM + I P V TY +
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+DAF + G + + +M+++ +K +TY +L+DG+ +A+ +++ + G+
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL 586
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P+V +YN ++N + + L EM N+ P++ ITY+++
Sbjct: 587 QPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDS---------------ITYSTM 631
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+ A + +A K + G PD R+Y L L ++ + KN ++
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKNRKD 681
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 60/272 (22%)
Query: 304 YCLVSEVNKAKYIL---NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+ L+ A YIL +++P + +V+ YN I+GL + D+A ++ MD N+
Sbjct: 245 FTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINV 304
Query: 361 VPNTVT------------------------------------FNSLIDGLC--------- 375
P+ VT F L+ C
Sbjct: 305 YPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL 364
Query: 376 -----------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
+SN I YN+L+DA KS+H+++ L ++RD+G++P TYNILMD
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK-EGLFDEALTLLSKMEDNGCMPD 483
+ + +++++ G V++YT +I+ + + + D A +M+ G P
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ ++ +I A G + KA EM G+
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGI 516
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 19/317 (5%)
Query: 133 GQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY 192
G+ + + D ++ G+ ++ LI + G R ++ K + +P Y
Sbjct: 166 GEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 193 NTIIDSL--CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
N I+ SL K + D +Y +M+ P V+T+N +++ +G+ LLDEM
Sbjct: 226 NAILHSLLGVKQYKLIDW--VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM 283
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
V +PD+YTYNIL+ K A N+L M + GV+P V+ +T+L+DG ++
Sbjct: 284 VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL 343
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
KY ++ + G TP+V Y MI G +++A +F EM K +PN T+NS+
Sbjct: 344 EACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSM 403
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
I G C + +A AL+K++ +G P+ Y+ L++ L G++
Sbjct: 404 IRGFCMAG---------------KFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Query: 431 KNAQEVIQDLLTKGYPV 447
A EV++D++ KG+ V
Sbjct: 449 LEAHEVVKDMVEKGHYV 465
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
DVV F + + P + IL SL+ +K Y + Q+ G TPD++T NI++
Sbjct: 205 DVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVM 264
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ + +L +++K G+ P+ T+ L+ L + AL +H+ G
Sbjct: 265 FANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVE 324
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
I + TLI+GL + G+ A + + PDVV Y +I + A +
Sbjct: 325 PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEM 384
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+ EM LP+V T+NS+I GFC+ G+ KEA ALL EM ++ NP+ Y+ LV+
Sbjct: 385 FKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKN 444
Query: 272 EGKVKEATNVLAVMMKQG 289
GKV EA V+ M+++G
Sbjct: 445 AGKVLEAHEVVKDMVEKG 462
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 21/307 (6%)
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV---TKNINPDVYTYNILVD 267
L EM+ + TFN LI C G+ A ++++ + T N P ++YN ++
Sbjct: 174 LIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH 230
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ + K V M++ G P+V+TY +M + + ++ +L+ M + G +P
Sbjct: 231 SLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
++ +YN +++ L ALNL M + P + F +LIDGL ++ +
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL------- 343
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
CK + +D+ + + G PDV Y +++ G G L+ A+E+ +++ KG
Sbjct: 344 EACK-YFMDETVKV-------GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
V TY MI G C G F EA LL +ME GC P+ + + T++ L G+ +A +++
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVV 455
Query: 508 REMMARG 514
++M+ +G
Sbjct: 456 KDMVEKG 462
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 6/280 (2%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKK---GYQPNTITFTTLIKGLCLNGQV 135
G T N+LI C C +A + A V+ + +K Y+P ++ ++ L Q
Sbjct: 182 GYPTTACTFNLLI-CTCGEAGL--ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQY 238
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ ++ ++ GF + ++Y ++ ++G+T +LL ++ PD+ YN +
Sbjct: 239 KLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNIL 298
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
+ L A NL + M + + P V+ F +LI G G+L+ +DE V
Sbjct: 299 LHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGC 358
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
PDV Y +++ + G++++A + M ++G PNV TY S++ G+C+ + +A
Sbjct: 359 TPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACA 418
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
+L M RG PN Y+T++N L V EA + +M
Sbjct: 419 LLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V ++L+ G+ P+ +T+ ++ G+ + D +V GF + +Y L++ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ A+L LL + V+P V+ + T+ID L + + E V + P VV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
+ +I G+ G+L++A + EM K P+V+TYN ++ FC GK KEA +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
+G PN V Y++L++ +V +A ++ M ++G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 21/267 (7%)
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
+N Y++L+ F + G+ K ++ M+K G T+ L+ C E
Sbjct: 146 ENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGL 202
Query: 313 AKYILNSMPQR---GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
A+ ++ + P SYN +++ L +K ++ +M
Sbjct: 203 ARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQM-------------- 248
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
L DG +++TYN ++ A + D+ L+ ++ G PD+ TYNIL+ L +
Sbjct: 249 LEDGF-TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
A ++ + G V +T +I+GL + G + + + GC PD + +
Sbjct: 308 PLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTV 367
Query: 490 IIRALFEKGENYKAEKLLREMMARGLL 516
+I GE KAE++ +EM +G L
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQL 394
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 91/186 (48%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D + + + +++ +P + + +L L A++L + + G+ P ++ L
Sbjct: 274 DRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTL 333
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ ++ + + + +K G P+ + +T +I G G+++ A + + +G
Sbjct: 334 IDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N +Y ++I G C G+ + + LL+++E + P+ V+Y+T++++L V +A
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Query: 211 LYSEMV 216
+ +MV
Sbjct: 454 VVKDMV 459
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 15/327 (4%)
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI 180
++ L+K G+ + + D +V GF ++ LI + G + ++ K
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
+ +P YN I++SL +Y +M+ P V+T+N L++ +G++
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKM 270
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
L DEM +PD YTYNIL+ K K A L M + G+ P+V+ YT+L
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+DG + KY L+ M + G P+V Y MI G +D+A +F EM K
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
+PN T+NS+I GLC + +A L+K++ +G P+ Y+ L
Sbjct: 391 LPNVFTYNSMIRGLCMAG---------------EFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ L + G+L A++VI++++ KG+ V
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKKGHYV 462
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 172/362 (47%), Gaps = 31/362 (8%)
Query: 179 KIEGKLVKPDVV--MYNTIIDSLCKDTLVTDAFNLYS-EMVAMRILPSVVTFNSLIYGFC 235
++ G LV+ +V + N D+ + + F L+S E R +V +++ L+ F
Sbjct: 103 RVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFR--HTVNSYHLLMKIFA 160
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ---GVKP 292
G+ K L+DEMV T+N+L+ C G+ A + MK +P
Sbjct: 161 ECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVVQFMKSKTFNYRP 217
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+Y ++++ V + +++ M + G +P+V +YN ++ ++ +D LF
Sbjct: 218 FKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLF 277
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDALCKS 392
EM P++ T+N L+ L K N ++ Y +L+D L ++
Sbjct: 278 DEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRA 337
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+++ + ++ G +PDV Y +++ G G L A+E+ +++ KG V TY
Sbjct: 338 GNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
MI GLC G F EA LL +ME GC P+ + + T++ L + G+ +A K++REM+
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 513 RG 514
+G
Sbjct: 458 KG 459
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 120/243 (49%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + IL SL+ +K Y + Q+ G +PD++T NIL+ ++ +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
++ + G+ P++ T+ L+ L + AL +H+ G + + Y TLI+GL +
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G A L ++ +PDVV Y +I + A ++ EM LP+V T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+NS+I G C+ G+ +EA LL EM ++ NP+ Y+ LV K GK+ EA V+ M+
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMV 456
Query: 287 KQG 289
K+G
Sbjct: 457 KKG 459
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 6/295 (2%)
Query: 64 HYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK---GYQPNTI 120
Y L ++ G T N+LI C C +A + A + + +K Y+P
Sbjct: 164 EYKAMWRLVDEMVQDGFPTTARTFNLLI-CSCGEAGL--AKQAVVQFMKSKTFNYRPFKH 220
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKI 180
++ ++ L Q + + ++ GF + ++Y L+ ++G+ +L ++
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEM 280
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
PD YN ++ L K A + M + I PSV+ + +LI G G L
Sbjct: 281 ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL 340
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
+ LDEMV PDV Y +++ + G++ +A + M +G PNV TY S+
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
+ G C+ E +A ++L M RG PN Y+T+++ L K + EA + EM
Sbjct: 401 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 4/231 (1%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V ++L+ G+ P+ +T+ L+ G++ + D + GF + +Y L++ L
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
K + A+L L ++ + P V+ Y T+ID L + + EMV P VV
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVV 360
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
+ +I G+ + G+L +A + EM K P+V+TYN ++ C G+ +EA +L M
Sbjct: 361 CYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEM 420
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG----VTPNVQSY 332
+G PN V Y++L+ ++++A+ ++ M ++G + P + Y
Sbjct: 421 ESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY-IL 317
V +Y++L+ F + G+ K ++ M++ G T+ L+ C E AK ++
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 318 NSMPQR--GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
M + P SYN ++N L +K ++ +M L DG
Sbjct: 206 QFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM--------------LEDGF- 250
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+++TYN LL + +D+ L ++ G PD TYNIL+ L + + A
Sbjct: 251 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALT 310
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+ + G +V YT +I+GL + G + L +M GC PD + + +I
Sbjct: 311 TLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYV 370
Query: 496 EKGENYKAEKLLREMMARGLL 516
GE KA+++ REM +G L
Sbjct: 371 VSGELDKAKEMFREMTVKGQL 391
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 72/148 (48%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
++ N + + P ++ + ++ L + + ++ G PD+V ++I
Sbjct: 308 ALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
Y ++ A + ++ KG PN T+ ++I+GLC+ G+ + A + ++G +
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKI 180
N + Y TL++ L K G+ + +++R++
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREM 455
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 20/379 (5%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP + + +L+ K A S L+ TG P+ L + C + + A
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSF---LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V + G + +T +++ G ++ + H +V F +I LI LC
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIR--CLIRALC 224
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
G +LL++ + + P +Y +I C+ + M+A PS+
Sbjct: 225 DGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMY 284
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
+ +I G C+ + EA + + K PD Y ++ FC++G + A + M
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+K+G++PN Y ++ G+ E++ + N M + G + S NTMI G C
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
DEA +F M + PN +T+N+LI G CK N V+K + L K++
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKEN---------------KVEKGLKLYKEL 449
Query: 406 RDQGIQPDVRTYNILMDGL 424
+ G++P Y L+ L
Sbjct: 450 KALGLKPSGMAYAALVRNL 468
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 17/330 (5%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
KP+ + + L ++ LV +A +Y+ + M I SVVT NS++ G +L
Sbjct: 142 KPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWE 201
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
L EMV + + L+ A C G V E +L +KQG+ P Y L+ G+C
Sbjct: 202 LHKEMVESEFDSE--RIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ +L++M P++ Y +I GLC K EA +F + K P+ V
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV 319
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
+ ++I G C+ + L +IKK G++P+ YN+++ G
Sbjct: 320 VYTTMIRGFCEKGWLGSARKL-----------WFEMIKK----GMRPNEFAYNVMIHGHF 364
Query: 426 EEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAI 485
+ G + + ++L GY T+ + MI G C G DEA + M + G P+AI
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGL 515
T+ +I+ ++ + K KL +E+ A GL
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGL 454
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 161/338 (47%), Gaps = 6/338 (1%)
Query: 45 PTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN-ILINCYCHQAQITSA 103
P P ++E + + L + AI + + L+ GI+ +VT N +L+ C +A+
Sbjct: 143 PEPTLLE--QYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCL--KARKLDR 198
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
F L K + + + ++ LI+ LC G V + + QG Q Y LI+G
Sbjct: 199 FWELHKEMVES-EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISG 257
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
C++G ++L + P + +Y II LC + +A+ ++ + P
Sbjct: 258 FCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPD 317
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
V + ++I GFC G L A L EM+ K + P+ + YN+++ K G++
Sbjct: 318 RVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYN 377
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M++ G +++ +++ G+C + ++A I +M + GVTPN +YN +I G CK
Sbjct: 378 EMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
V++ L L+ E+ + P+ + + +L+ L S+ +
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVA 475
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 143/325 (44%), Gaps = 8/325 (2%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQL---EFTGITPDIVT 86
V++ + ++N L M + ++ +L +K + L ++ EF D
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF-----DSER 215
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+ LI C ++ + +L + LK+G P + LI G C G + ++
Sbjct: 216 IRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMI 275
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
A + Y +I GLC + + + + ++ K PD V+Y T+I C+ +
Sbjct: 276 AWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLG 335
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A L+ EM+ + P+ +N +I+G G++ A +EM+ + + N ++
Sbjct: 336 SARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMI 395
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
FC GK EA + M + GV PN +TY +L+ G+C ++V K + + G+
Sbjct: 396 KGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Query: 327 PNVQSYNTMINGLCKIKMVDEALNL 351
P+ +Y ++ L V +LNL
Sbjct: 456 PSGMAYAALVRNLKMSDSVATSLNL 480
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 167/380 (43%), Gaps = 22/380 (5%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP V+LNIL + +A S L G++P +K L G V+ A++
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDTT---GFKPEPTLLEQYVKCLSEEGLVEEAIE 166
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKLVKPDVVMYNTIIDSL 199
++ + G + ++ +++ G K + +L ++ +E + D +I +L
Sbjct: 167 VYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF---DSERIRCLIRAL 223
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
C V++ + L + + + P + LI GFC +G +L M+ N P +
Sbjct: 224 CDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSM 283
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
Y Y ++ C K EA + + +G P+ V YT+++ G+C + A+ +
Sbjct: 284 YIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFE 343
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M ++G+ PN +YN MI+G K + + EM L +G +
Sbjct: 344 MIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM--------------LRNGY-GGTM 388
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
++ N+++ C D+A + K + + G+ P+ TYN L+ G C+E +++ ++ ++
Sbjct: 389 LSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKE 448
Query: 440 LLTKGYPVTVRTYTIMINGL 459
L G + Y ++ L
Sbjct: 449 LKALGLKPSGMAYAALVRNL 468
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
I N + + + ++ + P + + KI+ L K A + L+ G PD V
Sbjct: 261 IGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVV 320
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+I +C + + SA + +++KKG +PN + +I G G++ F++ ++
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G+ +S T+I G C G++ + ++ + + V P+ + YN +I CK+ V
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLI 231
LY E+ A+ + PS + + +L+
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALV 465
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+V + + + L+ P + K+++ ++ +Y+ + H + P +
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I C + A+ + + KGY P+ + +TT+I+G C G + +A + ++ +
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N+ +Y +I+G K G+ ++ ++ NT+I C +A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
F ++ M + P+ +T+N+LI GFC ++++ + L E+ + P Y LV
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 4/309 (1%)
Query: 61 KMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTI 120
K+ A + + E G TP+ T + + C ++ + A SV K+LK G
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGE 302
Query: 121 TFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM-GQTRASLQLLRK 179
+I C G+ + A ++ + L TLI LCK G + ++L
Sbjct: 303 QMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGD 362
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
+ G+ + + ++ +I SLC+ V DA L +M++ P FN +++ G
Sbjct: 363 LSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGD 422
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
L EA +L M ++ + PDVYTY +++ + K G + EA +LA K+ K + VTY +
Sbjct: 423 LDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHA 482
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD--EALNLFAEMDC 357
L+ GYC + E ++A +LN M + GV PN YN +I C +K +D +A LF EM
Sbjct: 483 LIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC-LKALDWEKAEVLFEEMKQ 541
Query: 358 KNIVPNTVT 366
K + N ++
Sbjct: 542 KGLHLNAIS 550
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 19/328 (5%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
LN LI + + +AF V +K + G+ PN T+ ++ LC + A + ++
Sbjct: 234 LNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKML 293
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQL--LRKIEGKLVKPDVVMYNTIIDSLCK-DT 203
G G +I CK G+ + + L K + K + P V T+I +LCK D
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDG 351
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+T A + ++ + F+ +I+ C + +K+A ALL +M++K P +N
Sbjct: 352 TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN 411
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
++V A K G + EA VL +M +G+KP+V TYT ++ GY +++A+ IL ++
Sbjct: 412 LVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
+ +Y+ +I G CKI+ DEAL L EMD + PN +N LI C
Sbjct: 472 HKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC-------- 523
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQ 411
K+ +KA L ++++ +G+
Sbjct: 524 ------LKALDWEKAEVLFEEMKQKGLH 545
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 152/312 (48%), Gaps = 21/312 (6%)
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
AF+++S+ P+ T+ + C + A ++ ++M+ + + ++
Sbjct: 250 AFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIIT 309
Query: 268 AFCKEGKVKEATNV--LAVMMKQGVKPNVVTYTSLMDGYCL-VSEVNKAKYILNSMPQRG 324
FCKEGK +EA +V LA ++ + P V +L+ C + A+ +L +
Sbjct: 310 WFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEA 367
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
++ ++ +I+ LC+++ V +A L +M K P FN ++
Sbjct: 368 RRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVH------------ 415
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
A K+ +D+A ++K + +G++PDV TY +++ G + G + AQE++ + K
Sbjct: 416 ---ACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY-KA 503
++ TY +I G CK +DEAL LL++M+ G P+A + +I++ K ++ KA
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 532
Query: 504 EKLLREMMARGL 515
E L EM +GL
Sbjct: 533 EVLFEEMKQKGL 544
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F ++ SL +M++ A +L + G P N++++ + A VL +
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+G +P+ T+T +I G G + A + + L+ ++Y LI G CK+ +
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD-AFNLYSEM 215
+L+LL +++ V+P+ YN +I S C L + A L+ EM
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEM 539
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
+ + T MD Y L V + + GV N++ N +I K+ A ++F+
Sbjct: 201 IASDTRRMDAYGLWDLVKE----IGEKESCGVL-NLEILNELIALFGKLGKSKAAFDVFS 255
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITY--------------------NSLLDALCKSH 393
+ + PN T+ ++ LCK + + + +++ CK
Sbjct: 256 KTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEG 315
Query: 394 HVDKAIAL--IKKIRDQGIQPDVRTYNILMDGLCE-EGRLKNAQEVIQDLLTKGYPVTVR 450
++A ++ + K +++ + P R L+ LC+ +G + AQE++ DL + ++
Sbjct: 316 KAEEAYSVYELAKTKEKSLPP--RFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIK 373
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
++ +I+ LC+ +A LL M G P F ++ A + G+ +A+++L+ M
Sbjct: 374 PFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM 433
Query: 511 MARGL 515
+RGL
Sbjct: 434 ESRGL 438
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ NV D ++ ++ P P F ++ + K A + +E G+ PD+ T
Sbjct: 385 MRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYT 444
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
++I+ Y + A +LA+ KK + + +T+ LI+G C + AL+ + +
Sbjct: 445 YTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMD 504
Query: 147 AQGFHLNQISYGTLINGLC 165
G N Y LI C
Sbjct: 505 RFGVQPNADEYNKLIQSFC 523
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 213/481 (44%), Gaps = 28/481 (5%)
Query: 33 VVSIFNRL-LRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ +F L LR +P IL L + S A+ + + E T + + N ++
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMM 232
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT--ALQFHDHVVAQG 149
Y + + A ++ + ++G P+ I+F TLI +G + A++ D V G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ I+Y TL++ + ++++ +E +PD+ YN +I + L +A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ E+ P VT+NSL+Y F ++ + +M D TYN ++ +
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 270 CKEGKVKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
K+G++ A + M G P+ +TYT L+D + +A +++ M G+ P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+Q+Y+ +I G K +EA + TF+ ++ K + + Y+ +LD
Sbjct: 473 LQTYSALICGYAKAGKREEAED---------------TFSCMLRSGTKPDNLAYSVMLDV 517
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL--LTKGYP 446
L + + KA L + + G P Y +++ GL +E R + Q+ I+D+ L P
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
+ + ++++ G C FD A L NG + T +I+ + G + +A +L
Sbjct: 578 LEIS--SVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 631
Query: 507 L 507
L
Sbjct: 632 L 632
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 165/354 (46%), Gaps = 30/354 (8%)
Query: 187 PDVVMYNTIIDSLCK---DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA 243
P+ M I+ L + ++L + F V R V +N+++ + G+ +A
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR----VQVYNAMMGVYSRSGKFSKA 244
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE--ATNVLAVMMKQGVKPNVVTYTSLM 301
L+D M + PD+ ++N L++A K G + A +L ++ G++P+ +TY +L+
Sbjct: 245 QELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLL 304
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
S ++ A + M P++ +YN MI+ + + EA LF E++ K
Sbjct: 305 SACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF 364
Query: 362 PNTVTFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIAL 401
P+ VT+NSL+ + + +TYN+++ K +D A+ L
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQL 424
Query: 402 IKKIRD-QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
K ++ G PD TY +L+D L + R A ++ ++L G T++TY+ +I G
Sbjct: 425 YKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYA 484
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
K G +EA S M +G PD + + ++ L E KA L R+M++ G
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 195/430 (45%), Gaps = 22/430 (5%)
Query: 65 YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITS--AFSVLAKILKKGYQPNTITF 122
+S A L + G PD+++ N LIN +T A +L + G +P+ IT+
Sbjct: 241 FSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY 300
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
TL+ + + A++ + + A + +Y +I+ + G + +L ++E
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 183 KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKE 242
K PD V YN+++ + ++ +Y +M M +T+N++I+ + GQL
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 243 AIALLDEMVT-KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
A+ L +M NPD TY +L+D+ K + EA +++ M+ G+KP + TY++L+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
GY + +A+ + M + G P+ +Y+ M++ L + +A L+ +M
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 362 PNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
P+ + +I GL K N +S + K I ++++ G+ P + ++L+
Sbjct: 541 PSYTLYELMILGLMKEN------------RSDDIQKTIRDMEEL--CGMNP-LEISSVLV 585
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
G C A ++ +T GY + T ++ G EA LL ++++
Sbjct: 586 KGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASG 641
Query: 482 PDAITFETII 491
+ E +I
Sbjct: 642 SKRLITEALI 651
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 171/360 (47%), Gaps = 24/360 (6%)
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y ++ + G+ + +L+ + + PD++ +NT+I++ K +T NL E++
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTP--NLAVELL 285
Query: 217 AM----RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M + P +T+N+L+ L A+ + ++M PD++TYN ++ + +
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G EA + + +G P+ VTY SL+ + K K + M + G + +Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN--IITYNSLLDALC 390
NT+I+ K +D AL L+ +M GL N ITY L+D+L
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMK----------------GLSGRNPDAITYTVLIDSLG 449
Query: 391 KSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
K++ +A AL+ ++ D GI+P ++TY+ L+ G + G+ + A++ +L G
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
Y++M++ L + +A L M +G P +E +I L ++ + +K +R+M
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 179/402 (44%), Gaps = 22/402 (5%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
++ + TL+ N A Q + G ++ +++ CK+G + Q++
Sbjct: 680 SSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVV 739
Query: 178 RKIEGK----LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+ E K P MY II++ K L A ++ + P + T+NSL+
Sbjct: 740 NQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
+ G + A A+ + M+ +P V + NIL+ A C +G+++E V+ + G K +
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
+ ++D + + + K I +SM G P ++ Y MI LCK K V +A + +
Sbjct: 857 KSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVS 916
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD 413
EM+ N K + +NS+L K + + ++I++ G++PD
Sbjct: 917 EMEEANF---------------KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
TYN L+ C + R + ++Q + G + TY +I+ K+ ++A L
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++ G D + T+++ + G + KAEKLL+ M G+
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/442 (20%), Positives = 190/442 (42%), Gaps = 50/442 (11%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ I+ + K K + A S+ L +G TPD+ T N L++ Y A ++ ++
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ G P + L+ LC++G+++ + + GF +++ S +++ + G
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ ++ P + +Y +I+ LCK V DA + SEM + +NS++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ + K+ + + + + PD TYN L+ +C++ + +E ++ M G+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P + TY SL I+ K K +++A L
Sbjct: 995 PKLDTYKSL-----------------------------------ISAFGKQKCLEQAEQL 1019
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
F E+ K + + +++++ I+ +S D+ KA L++ +++ GI+
Sbjct: 1020 FEELLSKGLKLDRSFYHTMMK-------ISRDSGSDS--------KAEKLLQMMKNAGIE 1064
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
P + T ++LM G + A++V+ +L +T Y+ +I+ + ++ +
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIER 1124
Query: 472 LSKMEDNGCMPDAITFETIIRA 493
L +M+ G PD + +RA
Sbjct: 1125 LLEMKKEGLEPDHRIWTCFVRA 1146
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/519 (19%), Positives = 201/519 (38%), Gaps = 46/519 (8%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+D V +F + P + + +++ + + A L +LE G PD VT N
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYN 371
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVA 147
L+ + + V ++ K G+ + +T+ T+I GQ+ ALQ + D
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G + + I+Y LI+ L K +T + L+ ++ +KP + Y+ +I K +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A + +S M+ P + ++ ++ + ++A L +M++ P Y +++
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 268 AFCKEGKVKE-------------------------------ATNVLAVMMKQGVKPNVVT 296
KE + + A L V + G + T
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 611
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
S++ Y ++A +L + + +I CK+ + AL+ +
Sbjct: 612 LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 671
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
C + G C + Y +LL + H +A + +R G +
Sbjct: 672 C-------------VHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESV 718
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT-YTIMINGLCKEGLFDEALTLLSKM 475
++ C+ G + A +V+ TKG+ YT +I K+ L+ +A +++ +
Sbjct: 719 CKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNL 778
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+G PD T+ +++ A + G +A + MM G
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/529 (19%), Positives = 211/529 (39%), Gaps = 63/529 (11%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +L + + ++ + Q++ G D +T N +I+ Y Q Q+ A
Sbjct: 365 PDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ- 423
Query: 107 LAKILK--KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
L K +K G P+ IT+T LI L + A ++ G +Y LI G
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
K G+ + + KPD + Y+ ++D L + A+ LY +M++ PS
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Query: 225 VTFNSLIYGFCIVGQ---LKEAIALLDEMVTKNINPDVYTYNILVDAFC----------- 270
+ +I G + +++ I ++E+ +NP + ++LV C
Sbjct: 544 TLYELMILGLMKENRSDDIQKTIRDMEELC--GMNP-LEISSVLVKGECFDLAARQLKVA 600
Query: 271 --------------------KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
G+ EA +L + + + +L+ +C V+ +
Sbjct: 601 ITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNL 660
Query: 311 NKA--KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD----------CK 358
+ A +Y + + Y T+++ + EA +F+++ CK
Sbjct: 661 SAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCK 720
Query: 359 NIV--------PNT---VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
++V P T V + G + Y +++A K KA +++ +R
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ 780
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
G PD++T+N LM + G + A+ + ++ G TV + I+++ LC +G +E
Sbjct: 781 SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
++ +++D G + ++ A G ++ +K+ M A G L
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 23/249 (9%)
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE-- 347
V V Y ++M Y + +KA+ ++++M QRG P++ S+NT+IN K +
Sbjct: 221 VGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL 280
Query: 348 ALNLFAEMDCKNIVPNTVTFNSL---------IDGL-----------CKSNIITYNSLLD 387
A+ L + + P+ +T+N+L +DG C+ ++ TYN+++
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ +A L ++ +G PD TYN L+ E + +EV Q + G+
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMED-NGCMPDAITFETIIRALFEKGENYKAEKL 506
TY +I+ K+G D AL L M+ +G PDAIT+ +I +L + +A L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 507 LREMMARGL 515
+ EM+ G+
Sbjct: 461 MSEMLDVGI 469
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/329 (19%), Positives = 146/329 (44%)
Query: 35 SIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
+IFN ++R P+P + +L +L + +L+ G ++ ++++ +
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAF 867
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
I + + + GY P + +I+ LC +V+ A + F +
Sbjct: 868 ARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVEL 927
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+ +++ + + ++Q+ ++I+ ++PD YNT+I C+D + + L +
Sbjct: 928 AIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQ 987
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M + + P + T+ SLI F L++A L +E+++K + D Y+ ++ G
Sbjct: 988 MRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGS 1047
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
+A +L +M G++P + T LM Y +A+ +L+++ V Y++
Sbjct: 1048 DSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSS 1107
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPN 363
+I+ + K + + EM + + P+
Sbjct: 1108 VIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 100/224 (44%), Gaps = 6/224 (2%)
Query: 55 ILTSLVKM----KHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKI 110
I S++KM + Y + + +++ TG+ PD T N LI YC + + ++ ++
Sbjct: 929 IWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM 988
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
G P T+ +LI ++ A Q + ++++G L++ Y T++ G
Sbjct: 989 RNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSD 1048
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ +LL+ ++ ++P + + ++ S +A + S + + + + ++S+
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPD--VYTYNILVDAFCKE 272
I + I L EM + + PD ++T + +F KE
Sbjct: 1109 IDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKE 1152
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 153/331 (46%), Gaps = 20/331 (6%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
+P++ +N ++D+LCK LV + L M R+ P TFN L +G+C V K+A+
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK---PNVVTYTSLMD 302
LL+EM+ P+ +TY +D FC+ G V EA ++ M+ +G P T+ ++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
+ + ++ M G P+V +Y +I G+C + VDEA EM K P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
+ I+TYN L LC++ D+A+ L ++ + P V+TYN+L+
Sbjct: 410 D---------------IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
E A ++ + V TY MINGL EA LL ++ + G
Sbjct: 455 MFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMAR 513
F++ + L E G N KA + E M +
Sbjct: 515 PYRVFDSFLMRLSEVG-NLKAIHKVSEHMKK 544
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 19/311 (6%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
++ L++ LCK G + LLR++ + VKPD +N + C+ A L EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN---PDVYTYNILVDAFCKE 272
+ P T+ + I FC G + EA L D M+TK P T+ +++ A K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
K +E ++ M+ G P+V TY +++G C+ +V++A L+ M +G P++ +Y
Sbjct: 355 DKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTY 414
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
N + LC+ + DEAL L+ M ++ C ++ TYN L+ +
Sbjct: 415 NCFLRVLCENRKTDEALKLYGRM---------------VESRCAPSVQTYNMLISMFFEM 459
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
D A ++ + DV TY +++GL + R K A ++++++ KG + R +
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVF 519
Query: 453 TIMINGLCKEG 463
+ L + G
Sbjct: 520 DSFLMRLSEVG 530
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P++ +N+L+DA CK G VKE +L M+ VKP+ T+ L G+C V + KA
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLR-RMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M + G P +Y I+ C+ MVDEA +LF M K + T
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK------- 342
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
T+ ++ AL K+ ++ LI ++ G PDV TY +++G+C ++ A +
Sbjct: 343 -----TFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+ ++ KGYP + TY + LC+ DEAL L +M ++ C P T+ +I F
Sbjct: 398 FLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 496 EKGENYKAEKLLREMMARGLLE 517
E + A EM R ++
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQ 479
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 134/333 (40%), Gaps = 33/333 (9%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
+ +R+ P I F +L +L K +L ++ + PD T N+L +C
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVR 282
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
A +L ++++ G++P T+ I C G V A D ++ +G
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKG--------- 333
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
+ P + +I +L K+ + F L M++
Sbjct: 334 -----------------------SAVSAPTAKTFALMIVALAKNDKAEECFELIGRMIST 370
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
LP V T+ +I G C+ ++ EA LDEM K PD+ TYN + C+ K EA
Sbjct: 371 GCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEA 430
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+ M++ P+V TY L+ + + + + A M +R +V++Y MING
Sbjct: 431 LKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING 490
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
L EA L E+ K + F+S +
Sbjct: 491 LFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 30 VDDVVSIFNRLLRMSPT---PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
VD+ +F+ ++ P F ++ +L K L ++ TG PD+ T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+I C ++ A+ L ++ KGY P+ +T+ ++ LC N + AL+
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL----- 433
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
YG ++ C P V YN +I +
Sbjct: 434 ----------YGRMVESRC--------------------APSVQTYNMLISMFFEMDDPD 463
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
AFN ++EM + V T+ ++I G + KEA LL+E+V K + ++ +
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL 523
Query: 267 DAFCKEGKVKEATNVLAVMMK 287
+ G +K V M K
Sbjct: 524 MRLSEVGNLKAIHKVSEHMKK 544
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 384 SLLDALCKSH--HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
+L C+ + HV K A K+IR + QP++ +N+L+D LC+ G +K + +++ +
Sbjct: 204 EILRKYCERYLTHVQK-FAKRKRIRVK-TQPEINAFNMLLDALCKCGLVKEGEALLRRMR 261
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
+ P T+ ++ G C+ +A+ LL +M + G P+ T+ I + G
Sbjct: 262 HRVKP-DANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVD 320
Query: 502 KAEKLLREMMARG 514
+A L M+ +G
Sbjct: 321 EAADLFDFMITKG 333
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 26/352 (7%)
Query: 171 RASLQLLRKIEG-KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
R++L +L+ E K K Y+ +D L K ++ E V +VT N+
Sbjct: 102 RSALGILKWAESCKGHKHSSDAYDMAVDILGK----AKKWDRMKEFVERMRGDKLVTLNT 157
Query: 230 ---LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++ F G+ +EA+ + D + + + + N+L+D CKE +V++A VL + +
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQL 216
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
K + PN T+ + G+C + V +A + + M G P V SY T+I C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
+ + +EM+ PN+ ITY +++ +L ++A+ + +++
Sbjct: 277 KVYEMLSEMEANGSPPNS---------------ITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ-DLLTKGYPVTVRTYTIMINGLCKEGLF 465
G +PD YN L+ L GRL+ A+ V + ++ G + TY MI C
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 466 DEALTLLSKMED-NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
D+A+ LL +ME N C PD T++ ++R+ F++G+ + KLL+EM+ + L
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 34/365 (9%)
Query: 84 IVTLNI---LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA-- 138
+VTLN ++ + + A + ++ + G + NT + L+ LC +V+ A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 139 --LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTII 196
LQ H+ N ++ I+G CK + +L +++++G +P V+ Y TII
Sbjct: 212 VLLQLKSHITP-----NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
C+ + + SEM A P+ +T+ +++ + +EA+ + M
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKY 315
PD YN L+ + G+++EA V V M + GV N TY S++ YC E +KA
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 316 ILNSMPQRGV-TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP-NTVTFNSLIDG 373
+L M + P+V +Y ++ K V E L EM K+ + + T+ LI
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
LC++N+ + A L +++ Q I P RT +L+ EE + KN
Sbjct: 447 LCRANMCEW---------------AYCLFEEMISQDITPRHRTCLLLL----EEVKKKNM 487
Query: 434 QEVIQ 438
E +
Sbjct: 488 HESAE 492
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 154/323 (47%), Gaps = 24/323 (7%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ + + + + N L+ C ++++A +L ++ + +I P+ +T+NI +
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFI 231
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+CK +V+EA + M G +P V++YT+++ YC E K +L+ M G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
PN +Y T+++ L K +EAL + M P+++ +N LI L ++
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 378 ------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGI-QPDVRTYNILMDGL 424
N TYNS++ C DKAI L+K++ + PDV TY L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 425 CEEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+ G + +++++++TK + + TYT +I LC+ + + A L +M P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 484 AITFETIIRALFEKGENYKAEKL 506
T ++ + +K + AE++
Sbjct: 472 HRTCLLLLEEVKKKNMHESAERI 494
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 4/300 (1%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ V IF+RL +L +L K K A + QL+ + ITP+ T NI
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ +C ++ A + ++ G++P I++TT+I+ C + + + A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N I+Y T+++ L + +L++ +++ KPD + YN +I +L + + +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 211 LYS-EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI-NPDVYTYNILVDA 268
++ EM + + + T+NS+I +C + +AI LL EM + N+ NPDV+TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 269 FCKEGKVKEATNVLAVMM-KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K G V E +L M+ K + + TYT L+ C + A + M + +TP
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 149/330 (45%), Gaps = 4/330 (1%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILK 112
KI+ + A+ + +L G+ + ++N+L++ C + ++ A VL + LK
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LK 217
Query: 113 KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
PN TF I G C +V+ AL + GF ISY T+I C+ +
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
++L ++E P+ + Y TI+ SL +A + + M P + +N LI+
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 233 GFCIVGQLKEAIALLD-EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV- 290
G+L+EA + EM ++ + TYN ++ +C + +A +L M +
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSM-PQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+V TY L+ +V + +L M + ++ + +Y +I LC+ M + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
LF EM ++I P T L++ + K N+
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNM 487
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 41 LRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQI 100
L+ TP F + K A+ +++ G P +++ +I CYC Q +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 101 TSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ---------------FHD-- 143
+ +L+++ G PN+IT+TT++ L + + AL+ F++
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 144 -HVVAQ------------------GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK- 183
H +A+ G +N +Y ++I C + +++LL+++E
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 184 LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP-SVVTFNSLIYGFCIVGQLKE 242
L PDV Y ++ S K V + L EMV L T+ LI C +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
A L +EM++++I P T +L++ K+ + A + +M
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 170/352 (48%), Gaps = 26/352 (7%)
Query: 171 RASLQLLRKIEG-KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
R++L +L+ E K K Y+ +D L K ++ E V +VT N+
Sbjct: 102 RSALGILKWAESCKGHKHSSDAYDMAVDILGK----AKKWDRMKEFVERMRGDKLVTLNT 157
Query: 230 ---LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++ F G+ +EA+ + D + + + + N+L+D CKE +V++A VL + +
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQL 216
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
K + PN T+ + G+C + V +A + + M G P V SY T+I C+
Sbjct: 217 KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
+ + +EM+ PN+ ITY +++ +L ++A+ + +++
Sbjct: 277 KVYEMLSEMEANGSPPNS---------------ITYTTIMSSLNAQKEFEEALRVATRMK 321
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ-DLLTKGYPVTVRTYTIMINGLCKEGLF 465
G +PD YN L+ L GRL+ A+ V + ++ G + TY MI C
Sbjct: 322 RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEE 381
Query: 466 DEALTLLSKMED-NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
D+A+ LL +ME N C PD T++ ++R+ F++G+ + KLL+EM+ + L
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 34/365 (9%)
Query: 84 IVTLNI---LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA-- 138
+VTLN ++ + + A + ++ + G + NT + L+ LC +V+ A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 139 --LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTII 196
LQ H+ N ++ I+G CK + +L +++++G +P V+ Y TII
Sbjct: 212 VLLQLKSHITP-----NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTII 266
Query: 197 DSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN 256
C+ + + SEM A P+ +T+ +++ + +EA+ + M
Sbjct: 267 RCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCK 326
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKY 315
PD YN L+ + G+++EA V V M + GV N TY S++ YC E +KA
Sbjct: 327 PDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIE 386
Query: 316 ILNSMPQRGV-TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP-NTVTFNSLIDG 373
+L M + P+V +Y ++ K V E L EM K+ + + T+ LI
Sbjct: 387 LLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQR 446
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
LC++N+ + A L +++ Q I P RT +L+ EE + KN
Sbjct: 447 LCRANMCEW---------------AYCLFEEMISQDITPRHRTCLLLL----EEVKKKNM 487
Query: 434 QEVIQ 438
E +
Sbjct: 488 HESAE 492
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 154/323 (47%), Gaps = 24/323 (7%)
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
+A ++ + + + + N L+ C ++++A +L ++ + +I P+ +T+NI +
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIFI 231
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+CK +V+EA + M G +P V++YT+++ YC E K +L+ M G
Sbjct: 232 HGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSP 291
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--------- 377
PN +Y T+++ L K +EAL + M P+++ +N LI L ++
Sbjct: 292 PNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 378 ------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGI-QPDVRTYNILMDGL 424
N TYNS++ C DKAI L+K++ + PDV TY L+
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 425 CEEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+ G + +++++++TK + + TYT +I LC+ + + A L +M P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Query: 484 AITFETIIRALFEKGENYKAEKL 506
T ++ + +K + AE++
Sbjct: 472 HRTCLLLLEEVKKKNMHESAERI 494
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 147/300 (49%), Gaps = 4/300 (1%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ V IF+RL +L +L K K A + QL+ + ITP+ T NI
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLK-SHITPNAHTFNIF 230
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ +C ++ A + ++ G++P I++TT+I+ C + + + A G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N I+Y T+++ L + +L++ +++ KPD + YN +I +L + + +A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 211 LYS-EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI-NPDVYTYNILVDA 268
++ EM + + + T+NS+I +C + +AI LL EM + N+ NPDV+TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 269 FCKEGKVKEATNVLAVMM-KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K G V E +L M+ K + + TYT L+ C + A + M + +TP
Sbjct: 411 CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 149/330 (45%), Gaps = 4/330 (1%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILK 112
KI+ + A+ + +L G+ + ++N+L++ C + ++ A VL + LK
Sbjct: 159 AKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LK 217
Query: 113 KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
PN TF I G C +V+ AL + GF ISY T+I C+ +
Sbjct: 218 SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIK 277
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
++L ++E P+ + Y TI+ SL +A + + M P + +N LI+
Sbjct: 278 VYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
Query: 233 GFCIVGQLKEAIALLD-EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV- 290
G+L+EA + EM ++ + TYN ++ +C + +A +L M +
Sbjct: 338 TLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC 397
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSM-PQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+V TY L+ +V + +L M + ++ + +Y +I LC+ M + A
Sbjct: 398 NPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAY 457
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
LF EM ++I P T L++ + K N+
Sbjct: 458 CLFEEMISQDITPRHRTCLLLLEEVKKKNM 487
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 38/283 (13%)
Query: 41 LRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQI 100
L+ TP F + K A+ +++ G P +++ +I CYC Q +
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 101 TSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ---------------FHD-- 143
+ +L+++ G PN+IT+TT++ L + + AL+ F++
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL 335
Query: 144 -HVVAQ------------------GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK- 183
H +A+ G +N +Y ++I C + +++LL+++E
Sbjct: 336 IHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSN 395
Query: 184 LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP-SVVTFNSLIYGFCIVGQLKE 242
L PDV Y ++ S K V + L EMV L T+ LI C +
Sbjct: 396 LCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEW 455
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
A L +EM++++I P T +L++ K+ + A + +M
Sbjct: 456 AYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 498
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 157/325 (48%), Gaps = 18/325 (5%)
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
P++V +N ++ +LCK V A ++ M R P T++ L+ G+ L +A +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
EM+ +PD+ TY+I+VD CK G+V EA ++ M KP Y+ L+ Y
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ + +A M + G+ +V +N++I CK + + EM K + PN+ +
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS 379
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
C N +L L + D+A + +K+ + +PD TY +++ CE
Sbjct: 380 --------C-------NIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCE 423
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
+ ++ A +V + + KG ++ T++++INGLC+E +A LL +M + G P +T
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT 483
Query: 487 FETIIRALFEKGENYKAEKLLREMM 511
F +R L K E K L E M
Sbjct: 484 FGR-LRQLLIKEEREDVLKFLNEKM 507
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 174/369 (47%), Gaps = 17/369 (4%)
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++K N TF +++ +V A+ + + N +++ L++ LCK
Sbjct: 156 LINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCK 215
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
R + ++ + + PD Y+ +++ K+ + A ++ EM+ P +VT
Sbjct: 216 SKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVT 274
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
++ ++ C G++ EA+ ++ M P + Y++LV + E +++EA + M
Sbjct: 275 YSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEME 334
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G+K +V + SL+ +C + + +L M +GVTPN +S N ++ L + D
Sbjct: 335 RSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKD 394
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA ++F +M +C+ + TY ++ C+ ++ A + K +R
Sbjct: 395 EAFDVFRKM----------------IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMR 438
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
+G+ P + T+++L++GLCEE + A ++++++ G + T+ + L KE D
Sbjct: 439 KKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Query: 467 EALTLLSKM 475
L KM
Sbjct: 499 VLKFLNEKM 507
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 160/350 (45%), Gaps = 37/350 (10%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
VD+ + FN + + P ++ F +L++L K K+ A + + TPD T
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTY 240
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+IL+ + + + A V +++ G P+ +T++ ++ LC G+V A
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA--------- 291
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
L ++R ++ + KP +Y+ ++ + + + +
Sbjct: 292 --------------------------LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEE 325
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A + + EM + V FNSLI FC ++K +L EM +K + P+ + NI++
Sbjct: 326 AVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILR 385
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ G+ EA +V M+K +P+ TYT ++ +C E+ A + M ++GV P
Sbjct: 386 HLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
++ +++ +INGLC+ + +A L EM I P+ VTF L L K
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE 494
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 25/348 (7%)
Query: 189 VVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
V Y+ +I+S K ++L + M ++L +V TF ++ + ++ EAI +
Sbjct: 134 VRAYHMMIESTAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAIYAFN 192
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
M ++ P++ +N L+ A CK V++A V M+ P+ TY+ L++G+
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFE-NMRDRFTPDSKTYSILLEGWGKEP 251
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+ KA+ + M G P++ +Y+ M++ LCK VDEAL + MD P T ++
Sbjct: 252 NLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYS 311
Query: 369 SLI---------------------DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
L+ G+ K+++ +NSL+ A CK++ + ++K+++
Sbjct: 312 VLVHTYGTENRLEEAVDTFLEMERSGM-KADVAVFNSLIGAFCKANRMKNVYRVLKEMKS 370
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+G+ P+ ++ NI++ L E G A +V + ++ P TYT++I C++ +
Sbjct: 371 KGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP-DADTYTMVIKMFCEKKEMET 429
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
A + M G P TF +I L E+ KA LL EM+ G+
Sbjct: 430 ADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGI 477
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 150/329 (45%), Gaps = 53/329 (16%)
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
SV ++ +I + Q K L++ M K + +V T+ I++ + + KV EA
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAF 191
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
VM K + PN+V + L+ C V KA+ + +M R TP+ ++Y+ ++ G K
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
+ +A +F EM ID C +I+TY+ ++D LCK+ VD+A+ ++
Sbjct: 251 PNLPKAREVFREM---------------IDAGCHPDIVTYSIMVDILCKAGRVDEALGIV 295
Query: 403 K-----------------------------------KIRDQGIQPDVRTYNILMDGLCEE 427
+ ++ G++ DV +N L+ C+
Sbjct: 296 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 355
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
R+KN V++++ +KG ++ I++ L + G DEA + KM C PDA T+
Sbjct: 356 NRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTY 414
Query: 488 ETIIRALFEKGENYKAEKLLREMMARGLL 516
+I+ EK E A+K+ + M +G+
Sbjct: 415 TMVIKMFCEKKEMETADKVWKYMRKKGVF 443
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 183/390 (46%), Gaps = 21/390 (5%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I+F ++T+ K+ +++ A + L G TP++++ L+ Y + +A ++ +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG---FHLNQISYGTLINGLCK 166
+ G +P+ IT+ ++K + + A + + ++ + +Q Y +I K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + ++ + GK V V YN++ + +T + +Y +M I P VV+
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVS 323
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+ LI + + +EA+++ +EM+ + P YNIL+DAF G V++A V M
Sbjct: 324 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ + P++ +YT+++ Y S++ A+ + G PN+ +Y T+I G K V+
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 443
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
+ + ++ +M I K+N +++DA + + A+ K++
Sbjct: 444 KMMEVYEKMRLSGI---------------KANQTILTTIMDASGRCKNFGSALGWYKEME 488
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
G+ PD + N+L+ + L+ A+E+
Sbjct: 489 SCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 198/463 (42%), Gaps = 57/463 (12%)
Query: 54 KILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
K L KM+ + A + Q + G+ +I + SA VL +
Sbjct: 57 KFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTG-------------SAVPVLRQYKTD 103
Query: 114 GYQ--PNTITFTTLI-----KGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
G Q P + TL+ K L ++ L++ + ++ ++I + LI K
Sbjct: 104 GDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNW-----WNFSEIDFLMLITAYGK 158
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+G + ++L + P+V+ Y +++S + +A ++ M + PS +T
Sbjct: 159 LGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 218
Query: 227 FNSLIYGFCIVGQLKEAI----ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+ ++ F + KEA LLDE + + PD Y++++ + K G ++A V
Sbjct: 219 YQIILKTFVEGDKFKEAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ M+ +GV + VTY SLM EV+K I + M + + P+V SY +I +
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII--------------------TY 382
+ +EAL++F EM + P +N L+D S ++ +Y
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 394
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
++L A + ++ A K+I+ G +P++ TY L+ G + ++ EV + +
Sbjct: 395 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 454
Query: 443 KGYPV--TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
G T+ T + +G CK F AL +ME G PD
Sbjct: 455 SGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 26/275 (9%)
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
+L+ A+ K G A VL+V+ K G PNV++YT+LM+ Y + N A+ I M
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-----------------------DCKNI 360
G P+ +Y ++ + EA +F + N
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
F+S++ + +TYNSL+ V K + +++ IQPDV +Y +L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 327
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+ R + A V +++L G T + Y I+++ G+ ++A T+ M +
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
PD ++ T++ A + AEK + + G
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 130/275 (47%), Gaps = 21/275 (7%)
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
P+V+++ +L+ + G+ A A+ M + P TY I++ F + K KEA V
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 282 LAVMM---KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
++ K +KP+ Y ++ Y KA+ + +SM +GV + +YN++++
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
K E ++ +M +I P+ +++Y L+ A ++ ++A
Sbjct: 299 ETSYK---EVSKIYDQMQRSDIQPD---------------VVSYALLIKAYGRARREEEA 340
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
+++ +++ D G++P + YNIL+D G ++ A+ V + + + +YT M++
Sbjct: 341 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ A +++ +G P+ +T+ T+I+
Sbjct: 401 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 95/215 (44%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+V I++++ R P ++ + ++ + + + A+S+ ++ G+ P NIL+
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 363
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ + + A +V + + P+ ++TT++ ++ A +F + GF
Sbjct: 364 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 423
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N ++YGTLI G K +++ K+ +K + + TI+D+ + A
Sbjct: 424 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 483
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
Y EM + + P N L+ +L+EA L
Sbjct: 484 YKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 183/390 (46%), Gaps = 21/390 (5%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I+F ++T+ K+ +++ A + L G TP++++ L+ Y + +A ++ +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG---FHLNQISYGTLINGLCK 166
+ G +P+ IT+ ++K + + A + + ++ + +Q Y +I K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + ++ + GK V V YN++ + +T + +Y +M I P VV+
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVS 316
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
+ LI + + +EA+++ +EM+ + P YNIL+DAF G V++A V M
Sbjct: 317 YALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ + P++ +YT+++ Y S++ A+ + G PN+ +Y T+I G K V+
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVE 436
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
+ + ++ +M I K+N +++DA + + A+ K++
Sbjct: 437 KMMEVYEKMRLSGI---------------KANQTILTTIMDASGRCKNFGSALGWYKEME 481
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
G+ PD + N+L+ + L+ A+E+
Sbjct: 482 SCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 198/463 (42%), Gaps = 57/463 (12%)
Query: 54 KILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
K L KM+ + A + Q + G+ +I + SA VL +
Sbjct: 50 KFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTG-------------SAVPVLRQYKTD 96
Query: 114 GYQ--PNTITFTTLI-----KGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
G Q P + TL+ K L ++ L++ + ++ ++I + LI K
Sbjct: 97 GDQGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNW-----WNFSEIDFLMLITAYGK 151
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
+G + ++L + P+V+ Y +++S + +A ++ M + PS +T
Sbjct: 152 LGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAIT 211
Query: 227 FNSLIYGFCIVGQLKEAI----ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+ ++ F + KEA LLDE + + PD Y++++ + K G ++A V
Sbjct: 212 YQIILKTFVEGDKFKEAEEVFETLLDEKKSP-LKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ M+ +GV + VTY SLM EV+K I + M + + P+V SY +I +
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII--------------------TY 382
+ +EAL++F EM + P +N L+D S ++ +Y
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
++L A + ++ A K+I+ G +P++ TY L+ G + ++ EV + +
Sbjct: 388 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
Query: 443 KGYPV--TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
G T+ T + +G CK F AL +ME G PD
Sbjct: 448 SGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 488
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 26/275 (9%)
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
+L+ A+ K G A VL+V+ K G PNV++YT+LM+ Y + N A+ I M
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-----------------------DCKNI 360
G P+ +Y ++ + EA +F + N
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
F+S++ + +TYNSL+ V K + +++ IQPDV +Y +L
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALL 320
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+ R + A V +++L G T + Y I+++ G+ ++A T+ M +
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
PD ++ T++ A + AEK + + G
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 131/275 (47%), Gaps = 21/275 (7%)
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV 281
P+V+++ +L+ + G+ A A+ M + P TY I++ F + K KEA V
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 282 LAVMM---KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
++ K +KP+ Y ++ Y KA+ + +SM +GV + +YN++++
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 291
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
K V + ++ +M +I P+ +++Y L+ A ++ ++A
Sbjct: 292 ETSYKEVSK---IYDQMQRSDIQPD---------------VVSYALLIKAYGRARREEEA 333
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
+++ +++ D G++P + YNIL+D G ++ A+ V + + + +YT M++
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ A +++ +G P+ +T+ T+I+
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 95/215 (44%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+V I++++ R P ++ + ++ + + + A+S+ ++ G+ P NIL+
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILL 356
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
+ + + A +V + + P+ ++TT++ ++ A +F + GF
Sbjct: 357 DAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE 416
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N ++YGTLI G K +++ K+ +K + + TI+D+ + A
Sbjct: 417 PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGW 476
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
Y EM + + P N L+ +L+EA L
Sbjct: 477 YKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 165/342 (48%), Gaps = 20/342 (5%)
Query: 160 LINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
++ L K G+ ++ ++E VK D + N+++D+L K+ + A ++ ++
Sbjct: 209 VMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT 268
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
I P TFN LI+GFC + +A A++D M PDV TY V+A+CKEG +
Sbjct: 269 -IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRV 327
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+L M + G PNVVTYT +M +V +A + M + G P+ + Y+++I+
Sbjct: 328 NEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHI 387
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
L K +A +F +M + + + +++ YN+++ A + A
Sbjct: 388 LSKTGRFKDAAEIFEDMTNQGV---------------RRDVLVYNTMISAALHHSRDEMA 432
Query: 399 IALIKKIRD---QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
+ L+K++ D + P+V TY L+ C + ++K ++ ++ + V TY ++
Sbjct: 433 LRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILL 492
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
I GLC G +EA + G +P T + ++ L +K
Sbjct: 493 IRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKK 534
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 5/344 (1%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFT-GITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
K++ L K Y+ A+ ++E + G+ D + +N L++ + I A V K+
Sbjct: 207 SKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLF 266
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+P+ TF LI G C + A D + F + ++Y + + CK G R
Sbjct: 267 D-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++L ++ P+VV Y ++ SL K V +A +Y +M +P ++SLI
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK---Q 288
+ G+ K+A + ++M + + DV YN ++ A + + A +L M +
Sbjct: 386 HILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGE 445
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
PNV TY L+ C ++ +L+ M + V+ +V +Y +I GLC V+EA
Sbjct: 446 SCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
F E K +VP T L+D L K N+ + +L +S
Sbjct: 506 CLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQS 549
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 38/250 (15%)
Query: 296 TYTSLMD--GYC--------LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
TY +++D G C LV+E+NK + + VT + S ++ L K
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNE------ESKLVTLDTMS--KVMRRLAKSGKY 219
Query: 346 DEALNLFAEMD-CKNIVPNTVTFNSLIDGLCKSNII-------------------TYNSL 385
++A++ F EM+ + +T+ NSL+D L K N I T+N L
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNIL 279
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ CK+ D A A++ ++ PDV TY ++ C+EG + E+++++ G
Sbjct: 280 IHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC 339
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
V TYTI+++ L K EAL + KM+++GC+PDA + ++I L + G A +
Sbjct: 340 NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAE 399
Query: 506 LLREMMARGL 515
+ +M +G+
Sbjct: 400 IFEDMTNQGV 409
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P F ++ K + + A ++ ++ T TPD+VT + YC + +
Sbjct: 271 PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ + G PN +T+T ++ L + QV AL ++ + G + Y +LI+ L K
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL---CKDTLVTDAFNLYSEMVAMRILPS 223
G+ + + ++ + + V+ DV++YNT+I + +D + + P+
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
V T+ L+ C ++K LL MV +++ DV TY +L+ C GKV+EA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 284 VMMKQGVKPNVVTYTSLMD 302
+++G+ P T L+D
Sbjct: 511 EAVRKGMVPRDSTCKMLVD 529
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT-------- 366
+ + + Q G + +YN M++ L K + D L EM+ KN VT
Sbjct: 152 FFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVM 210
Query: 367 --------FNSLIDGL--------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
+N +D K++ I NSL+DAL K + ++ A + K+ D I
Sbjct: 211 RRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-I 269
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
+PD RT+NIL+ G C+ + +A+ ++ + + V TYT + CKEG F
Sbjct: 270 KPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 471 LLSKMEDNGCMPDAITFETIIRAL 494
+L +M +NGC P+ +T+ ++ +L
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSL 353
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 7/253 (2%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
DD ++ + + TP ++ + + + K + + ++ G P++VT I+
Sbjct: 290 DDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIV 349
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
++ Q+ A V K+ + G P+ +++LI L G+ + A + + + QG
Sbjct: 350 MHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGV 409
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKI---EGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ + Y T+I+ + +L+LL+++ EG+ P+V Y ++ C +
Sbjct: 410 RRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKL 469
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L MV + V T+ LI G C+ G+++EA +E V K + P T +LVD
Sbjct: 470 LGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Query: 268 AFCK----EGKVK 276
K E K+K
Sbjct: 530 ELEKKNMAEAKLK 542
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 199/460 (43%), Gaps = 61/460 (13%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ IL+S K+ + AI L ++E G+ PDIVT N L++ Y + A +VL ++
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
G +P+T + ++L++ + G ++ H +++ NQ+ Y
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILR-----NQLWY-------------- 258
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
DV + T+ID K + A ++ M A ++V +NSL+
Sbjct: 259 ----------------DVYVETTLIDMYIKTGYLPYARMVFDMMDA----KNIVAWNSLV 298
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G LK+A AL+ M + I PD T+N L + GK ++A +V+ M ++GV
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNVV++T++ G A + M + GV PN + +T++ L + ++ +
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 352 FAEMDCKNIVPNTVTFNSLID----------------GLCKSNIITYNSLLDALCKSHHV 395
KN++ + +L+D G+ ++ ++N +L
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV--TVRTYT 453
++ IA + + G++PD T+ ++ +C+ L DL+ Y + T+ +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
M++ L + G DEA + M PDA + + +
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTMS---LKPDATIWGAFLSS 574
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/505 (21%), Positives = 217/505 (42%), Gaps = 57/505 (11%)
Query: 38 NRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQ 97
N+L P + + +I+ ++ ++ A+ L +++F+G T+ L+ ++
Sbjct: 43 NKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNK 102
Query: 98 AQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISY 157
+ +L+ G + N +LI NG+++ + + + + + N S+
Sbjct: 103 EGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSW 158
Query: 158 GTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA 217
++++ K+G ++ LL ++E +KPD+V +N+++ L DA + M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK--- 274
+ PS + +SL+ G LK A+ ++ + DVY L+D + K G
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 275 ----------------------------VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
+K+A ++ M K+G+KP+ +T+ SL GY
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ + KA ++ M ++GV PNV S+ + +G K AL +F +M + + PN T
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
++L+ L +++ + C +R + + D L+D +
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFC--------------LR-KNLICDAYVATALVDMYGK 443
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G L++A E+ + K ++ ++ M+ G G +E + S M + G PDAIT
Sbjct: 444 SGDLQSAIEIFWGIKNK----SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAIT 499
Query: 487 FETIIRALFEKG---ENYKAEKLLR 508
F +++ G E +K L+R
Sbjct: 500 FTSVLSVCKNSGLVQEGWKYFDLMR 524
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 52/310 (16%)
Query: 238 GQLKEAIALLDEMVTKNINP-DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
G ++A+ L EM D +L KEG E + +++ G++ NV
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEG-FAEGRQIHGYVLRLGLESNVSM 126
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
SL+ Y ++ ++ + NSM R N+ S+N++++ K+ VD+A+ L EM+
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+ P+ VT+NSL+ G + AIA++K+++ G++P +
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGL---------------SKDAIAVLKRMQIAGLKPSTSS 227
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTK--GYPVTVRT----------------------- 451
+ L+ + E G LK + + +L Y V V T
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 452 ------YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
+ +++GL L +A L+ +ME G PDAIT+ ++ G+ KA
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 506 LLREMMARGL 515
++ +M +G+
Sbjct: 348 VIGKMKEKGV 357
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 184/460 (40%), Gaps = 83/460 (18%)
Query: 43 MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITS 102
M I+ + +++ L A +L ++E GI PD +T N L + Y +
Sbjct: 285 MMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLIN 162
A V+ K+ +KG PN +++T + G NG + AL+ + +G N + TL+
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Query: 163 GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM-VAMRIL 221
L L LL GK V + N I D+ LV D + ++ A+ I
Sbjct: 405 IL-------GCLSLLH--SGKEVHGFCLRKNLICDAYVATALV-DMYGKSGDLQSAIEIF 454
Query: 222 -----PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
S+ ++N ++ G+ + G+ +E IA M+ + PD T+
Sbjct: 455 WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF-------------- 500
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
T+VL+V G+ Y LM +++Y G+ P ++ + M+
Sbjct: 501 --TSVLSVCKNSGLVQEGWKYFDLM----------RSRY--------GIIPTIEHCSCMV 540
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
+ L + +DEA + M K P+ + + + CK H D
Sbjct: 541 DLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSS----------------CKIHR-D 580
Query: 397 KAIALIKKIRDQGIQP-DVRTYNILMDGLCEEGRLKNAQEV----------IQDLLTK-G 444
+A I R Q ++P + Y ++++ R ++ + + +QDL +
Sbjct: 581 LELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQ 640
Query: 445 YPVTVRTYTIMINGLCKEG-LFDEALTLLSKMEDNGCMPD 483
TV + EG ++ E L+S+M+ +G +PD
Sbjct: 641 IDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPD 680
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 25/348 (7%)
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
+LR ++ + D +Y T+I S K V F ++ +M + ++ TF +LI G
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCA 548
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ--GVKPN 293
GQ+ +A + +KN+ PD +N L+ A + G V A +VLA M + + P+
Sbjct: 549 RAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPD 608
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
++ +LM C +V +AK + + + G+ + Y +N K D A +++
Sbjct: 609 HISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYK 668
Query: 354 EMDCKNIVPNTVTFNSLID------------GLCKS--------NIITYNSLLDALCKSH 393
+M K++ P+ V F++LID G+ + I+Y+SL+ A C +
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
KA+ L +KI+ ++P + T N L+ LCE +L A E + ++ T G TY+
Sbjct: 729 DWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYS 788
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT---FETIIRALFEKG 498
+++ ++ F+ + LLS+ + +G P+ I ++ + FEK
Sbjct: 789 MLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKA 836
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 139/329 (42%), Gaps = 37/329 (11%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
+ P + T N+L++ I A VL + + G + +TTLI +G+V
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ + G N ++G LI+G + GQ + + K VKPD V++N +I +
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 200 CKDTLVTDAFNLYSEMVA--MRILPSVVTFNSLIYGFCIVGQLKEA-------------- 243
+ V AF++ +EM A I P ++ +L+ C GQ++ A
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 244 ---------------------IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
++ +M K++ PD ++ L+D + EA +L
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
QG++ ++Y+SLM C + KA + + + P + + N +I LC+
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+ +A+ E+ + PNT+T++ L+
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 2/302 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VD + +F+++ + FG ++ + + A L + PD V N
Sbjct: 518 VDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 90 LINCYCHQAQITSAFSVLAKILKKGY--QPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
LI+ + AF VLA++ + + P+ I+ L+K C GQV+ A + + +
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHK 637
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
G Y +N K G + + + ++ K V PD V ++ +ID ++ +
Sbjct: 638 YGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDE 697
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
AF + + + I ++++SL+ C K+A+ L +++ + + P + T N L+
Sbjct: 698 AFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALIT 757
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
A C+ ++ +A L + G+KPN +TY+ LM + + +L+ GV+P
Sbjct: 758 ALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Query: 328 NV 329
N+
Sbjct: 818 NL 819
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 17/239 (7%)
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+NP + T+N+L+ ++ A VL ++ + G+ + YT+L+ +V+
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+ + M GV N+ ++ +I+G + V +A + + KN+ P+ V FN+LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALI--- 579
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ--GIQPDVRTYNILMDGLCEEGRLKN 432
A +S VD+A ++ +++ + I PD + LM C G+++
Sbjct: 580 ------------SACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A+EV Q + G T YTI +N K G +D A ++ M++ PD + F +I
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 29/378 (7%)
Query: 162 NGLCKMGQTRASLQLLRKIEGK-LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
N L + G+ + + LL ++ + L+ D + + + + K V +AF +++++ +
Sbjct: 408 NRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR-FTKLI---L 463
Query: 221 LPSVVTFNSLIYGFCIVGQ-LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEAT 279
P++ TFN L+ C Q ++ A +L + + D Y L+ + K GKV
Sbjct: 464 NPTMSTFNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 280 NVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
V M GV+ N+ T+ +L+DG +V KA + + V P+ +N +I+
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 340 CKIKMVDEALNLFAEMDCKN--IVPNTVTFNSLIDGLCKSNII----------------- 380
+ VD A ++ AEM + I P+ ++ +L+ C + +
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 381 ---TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
Y +++ KS D A ++ K ++++ + PD ++ L+D L A ++
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
QD ++G + +Y+ ++ C + +AL L K++ P T +I AL E
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 498 GENYKAEKLLREMMARGL 515
+ KA + L E+ GL
Sbjct: 763 NQLPKAMEYLDEIKTLGL 780
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 183/404 (45%), Gaps = 24/404 (5%)
Query: 122 FTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK-I 180
F ++I+ G+++ A+ + +S+ TL+ + K + A+ + RK
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
G V + N ++ LC+ A ++ EM P ++ L+ GFC+ G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 241 KEAIALLDEMVT----KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
+EA LL M K D+ Y IL+DA C G+V +A +L ++++G+K
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 297 YTSLMDGYCLVSE--VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
Y + G+ S + + K +L RG P + SY+ M L + + E +
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG-IQPD 413
M K P Y + + ALC++ + +A+++I K QG P
Sbjct: 324 MRSKGFEPTP---------------FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT-VRTYTIMINGLCKEGLFDEALTLL 472
V YN+L+ GLC++G+ A ++ + + V TY +++GLC++G F EA ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+M P T+ +I+ L + Y+A L EM+++ ++
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 44/391 (11%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTG-ITPDIVTL 87
++D +S+F L + + F +L +VK A + + + + I L
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITAL 155
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF----HD 143
N+L+ C + A V ++ +G P+ ++ L+KG CL G+++ A
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI-------- 195
+ +G + + Y L++ LC G+ ++++L KI K +K Y+ I
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 196 ------IDSLCKDTLVTDAF-----------NLYSE---------MVAMR---ILPSVVT 226
+ L +TL+ A +L+ E ++AMR P+
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 227 FNSLIYGFCIVGQLKEAIALLD-EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
+ + + C G+LKEA+++++ EM+ + P V YN+L+ C +GK EA L M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 286 MKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
KQ N TY +L+DG C + +A ++ M + P V++Y+ MI GLC +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
EA+ EM +++VP + + +L + +C
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 27/249 (10%)
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
N Y +++D + V + KY++ M + + ++I + +++A++LF
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCK---------------------SNIITYNSLLDALCK 391
+ N V +++F++L+ + K S I N L+ LC+
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT----KGYPV 447
+ D A + +++ QG PD +Y ILM G C EG+L+ A ++ + KG
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN--YKAEK 505
+ Y I+++ LC G D+A+ +L K+ G + I +E + ++
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 506 LLREMMARG 514
LL E + RG
Sbjct: 285 LLTETLIRG 293
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 183/404 (45%), Gaps = 24/404 (5%)
Query: 122 FTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK-I 180
F ++I+ G+++ A+ + +S+ TL+ + K + A+ + RK
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYC 143
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
G V + N ++ LC+ A ++ EM P ++ L+ GFC+ G+L
Sbjct: 144 YGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKL 203
Query: 241 KEAIALLDEMVT----KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
+EA LL M K D+ Y IL+DA C G+V +A +L ++++G+K
Sbjct: 204 EEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRC 263
Query: 297 YTSLMDGYCLVSE--VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
Y + G+ S + + K +L RG P + SY+ M L + + E +
Sbjct: 264 YHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA 323
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG-IQPD 413
M K P Y + + ALC++ + +A+++I K QG P
Sbjct: 324 MRSKGFEPTP---------------FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT-VRTYTIMINGLCKEGLFDEALTLL 472
V YN+L+ GLC++G+ A ++ + + V TY +++GLC++G F EA ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+M P T+ +I+ L + Y+A L EM+++ ++
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 175/391 (44%), Gaps = 44/391 (11%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTG-ITPDIVTL 87
++D +S+F L + + F +L +VK A + + + + I L
Sbjct: 96 RLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITAL 155
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF----HD 143
N+L+ C + A V ++ +G P+ ++ L+KG CL G+++ A
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI-------- 195
+ +G + + Y L++ LC G+ ++++L KI K +K Y+ I
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 196 ------IDSLCKDTLVTDAF-----------NLYSE---------MVAMR---ILPSVVT 226
+ L +TL+ A +L+ E ++AMR P+
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 227 FNSLIYGFCIVGQLKEAIALLD-EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
+ + + C G+LKEA+++++ EM+ + P V YN+L+ C +GK EA L M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 286 MKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
KQ N TY +L+DG C + +A ++ M + P V++Y+ MI GLC +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
EA+ EM +++VP + + +L + +C
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 109/249 (43%), Gaps = 27/249 (10%)
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
N Y +++D + V + KY++ M + + ++I + +++A++LF
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCK---------------------SNIITYNSLLDALCK 391
+ N V +++F++L+ + K S I N L+ LC+
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT----KGYPV 447
+ D A + +++ QG PD +Y ILM G C EG+L+ A ++ + KG
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN--YKAEK 505
+ Y I+++ LC G D+A+ +L K+ G + I +E + ++
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 506 LLREMMARG 514
LL E + RG
Sbjct: 285 LLTETLIRG 293
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 176/378 (46%), Gaps = 36/378 (9%)
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQL---LRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
QG+ + Y ++I+ L KM + + L +RK LV ++ +I C
Sbjct: 155 QGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLL--IMIRKYCAVHD 212
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP-DVYTYN 263
V A N + ++ + F SL+ C + +A L+ K+ P D ++N
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFN 270
Query: 264 ILVDAFCKE-GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
I+++ +C G +EA V M GVK +VV+Y+S++ Y +NK + + M +
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ P+ + YN +++ L K V EA NL M + K I PN VT
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVT--------------- 375
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
YNSL+ LCK+ ++A + ++ ++G+ P +RTY+ M R+ E + +LL
Sbjct: 376 YNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFM-------RILRTGEEVFELL 428
Query: 442 TK----GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
K G TV TY ++I LC+ FD L L +M++ PD ++ +I LF
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLN 488
Query: 498 GENYKAEKLLREMMARGL 515
G+ +A +EM +G+
Sbjct: 489 GKIEEAYGYYKEMKDKGM 506
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 180/408 (44%), Gaps = 50/408 (12%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIV---TLNILINCYCHQAQITSA-- 103
+ E+ +++ L KM+ + TA +L E +P +V TL I+I YC + A
Sbjct: 161 VREYHSMISILGKMRKFDTAWTLID--EMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 104 ----------------FSVLAKIL----------------KKGYQPNTITFTTLIKGLC- 130
F L L K Y + +F ++ G C
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCN 278
Query: 131 LNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVV 190
+ G + A + + G + +SY ++I+ K G L+L +++ + ++PD
Sbjct: 279 VIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRK 338
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
+YN ++ +L K + V++A NL M + I P+VVT+NSLI C + +EA + DE
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M+ K + P + TY+ + + G+ E +LA M K G +P V TY L+ C +
Sbjct: 399 MLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRD 455
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ + + M ++ V P++ SY MI+GL ++EA + EM K + PN
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNE-NVED 514
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI--QPDVR 415
+I + D+ V+K + K R++ QP+VR
Sbjct: 515 MIQSWFSGKQYAEQRITDS---KGEVNKGAIVKKSEREKNFLQQPEVR 559
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 145/302 (48%), Gaps = 27/302 (8%)
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM------------- 218
++ ++RK+ + + + N +I + + ++ + +Y E+ +
Sbjct: 180 GAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIG 239
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKE 277
+I P+ TFNS++ F G+ + + EM + +P+VY+YN+L++A+C G + E
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
A V M +GV ++V Y +++ G C EV KAK + M +G+ +Y ++N
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
G CK VD L ++ EM K + +T +L++GLC V +
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR------------DGQRVVE 407
Query: 398 AIALIK-KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
A ++K +R+ P Y +L+ LCE+G++ A + +++ KG+ + TY I
Sbjct: 408 AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Query: 457 NG 458
+G
Sbjct: 468 DG 469
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 5/220 (2%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
E G +P++ + N+L+ YC + ++ A V ++ +G + + + T+I GLC N +V
Sbjct: 273 EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEV 332
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
A + + +G ++Y L+NG CK G + L + R+++ K + D + +
Sbjct: 333 VKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Query: 196 IDSLCKD---TLVTDAFNLYSEMVAMRIL-PSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
++ LC D V +A ++ + V + PS + L+ C G++ A+ + EMV
Sbjct: 393 VEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMV 452
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
K P TY +D + G +E + +LA+ M + +K
Sbjct: 453 GKGFKPSQETYRAFIDGYGIVGD-EETSALLAIEMAESLK 491
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 135/338 (39%), Gaps = 57/338 (16%)
Query: 28 HNVDDVVSIFNRLLR---MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDI 84
+ D V+ +F L++ + P + F ++ S + K A+ + +L GI I
Sbjct: 139 EDEDRVLKVFRSLIKSYNRCGSAPFV-FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 197
Query: 85 VTLNILINCYCHQAQITSAFSVL-------------AKILKKGYQPNTITFTTLIKGLCL 131
T N LI + ++ + + AK + +PN TF +++
Sbjct: 198 STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYR 257
Query: 132 NGQVQTALQFHDHVVAQ-GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVV 190
G+ + + + + G N SY L+ C G + ++ +++ + V D+V
Sbjct: 258 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 317
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
YNT+I LC + V A L+ +M I + +T+ L+ G+C G + + + EM
Sbjct: 318 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 377
Query: 251 VTKNINPDVYT---------------------------------------YNILVDAFCK 271
K D T Y +LV C+
Sbjct: 378 KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCE 437
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
+GK+ A N+ A M+ +G KP+ TY + +DGY +V +
Sbjct: 438 DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGD 475
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 134/307 (43%), Gaps = 33/307 (10%)
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL---- 282
F+ LI ++ A+ ++ ++ ++ IN + T N L+ + +
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 283 ---------AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR-GVTPNVQSY 332
A M +KPN T+ S+M + E + I M + G +PNV SY
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
N ++ C ++ EA ++ EM + +V +I+ YN+++ LC +
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVV---------------YDIVAYNTMIGGLCSN 329
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
V KA L + + +GI+ TY L++G C+ G + + V +++ KG+ T
Sbjct: 330 FEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTI 389
Query: 453 TIMINGLC--KEG--LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
++ GLC ++G + + A + + + P +E +++ L E G+ +A +
Sbjct: 390 EALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQA 449
Query: 509 EMMARGL 515
EM+ +G
Sbjct: 450 EMVGKGF 456
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
+P + + ++ + S A + +++ G+ DIV N +I C ++ A
Sbjct: 278 SPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKE 337
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ + KG + +T+ L+ G C G V + L + + +GF + ++ L+ GLC
Sbjct: 338 LFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 166 --KMGQ--TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL 221
+ GQ A+ + + + P Y ++ LC+D + A N+ +EMV
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
PS T+ + I G+ IVG + + L EM
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEMA 487
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 79/200 (39%), Gaps = 51/200 (25%)
Query: 367 FNSLIDGL--CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG--------------- 409
F SLI C S ++ L+ + S +D A+ +++K+R +G
Sbjct: 148 FRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEV 207
Query: 410 ---------------------------------IQPDVRTYNILMDGLCEEGRLKNAQEV 436
I+P+ T+N +M EG + + +
Sbjct: 208 SRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERI 267
Query: 437 IQDLLTK-GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+++ + G V +Y +++ C GL EA + +M+ G + D + + T+I L
Sbjct: 268 WREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC 327
Query: 496 EKGENYKAEKLLREMMARGL 515
E KA++L R+M +G+
Sbjct: 328 SNFEVVKAKELFRDMGLKGI 347
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 156/329 (47%), Gaps = 19/329 (5%)
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
D YN+++ L K ++ EM +L ++ TF + F + K+A+ +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 252
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+ M V T N L+D+ + KEA VL +K+ PN++TYT L++G+C V
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRV 311
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+ +A I N M +G+ P++ ++N M+ GL + + +A+ LF M K PN
Sbjct: 312 RNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN---- 367
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
+ +Y ++ CK ++ AI + D G+QPD Y L+ G +
Sbjct: 368 -----------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
+L E+++++ KG+P +TY +I + + + + A + +KM N P TF
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 476
Query: 488 ETIIRALFEKGENYK-AEKLLREMMARGL 515
I+++ F NY+ + EM+ +G+
Sbjct: 477 NMIMKSYF-MARNYEMGRAVWEEMIKKGI 504
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 175/387 (45%), Gaps = 18/387 (4%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G+ ++ T+ +++ L Q +T + + + +G L ++ + + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + ++ K V N ++DSL + L +A L+ ++ R P+++T+ L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLL 305
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G+C V L EA + ++M+ + + PD+ +N++++ + K +A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNV +YT ++ +C S + A + M G+ P+ Y +I G K +D L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
EM K P+ T+N+LI + + + A + K+ I+
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEH---------------ATRIYNKMIQNEIE 470
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
P + T+N++M + + V ++++ KG +YT++I GL EG EA
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRY 530
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKG 498
L +M D G I + A F +G
Sbjct: 531 LEEMLDKGMKTPLIDYNKFA-ADFHRG 556
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 176/371 (47%), Gaps = 21/371 (5%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
E G D T N +++ Q + SVL ++ KG TFT +K +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ A+ + + F + + L++ L + + + L K++ + P+++ Y +
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVL 304
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
++ C+ + +A ++++M+ + P +V N ++ G + +AI L M +K
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+V +Y I++ FCK+ ++ A M+ G++P+ YT L+ G+ +++
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M ++G P+ ++YN +I + KM + A ++ +M I P+ TFN ++
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIM---- 480
Query: 376 KSNIITYNSLLDALCKSHHVDKAI--ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
KS + N + + +A+ +IKK GI PD +Y +L+ GL EG+ + A
Sbjct: 481 KSYFMARN---------YEMGRAVWEEMIKK----GICPDDNSYTVLIRGLIGEGKSREA 527
Query: 434 QEVIQDLLTKG 444
++++L KG
Sbjct: 528 CRYLEEMLDKG 538
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 124/255 (48%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP ++ + +L ++++ A + + + G+ PDIV N+++ + + A
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK 354
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ + KG PN ++T +I+ C ++TA+++ D +V G + Y LI G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ +LL++++ K PD YN +I + + A +Y++M+ I PS+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIH 474
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
TFN ++ + + + A+ +EM+ K I PD +Y +L+ EGK +EA L M
Sbjct: 475 TFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Query: 286 MKQGVKPNVVTYTSL 300
+ +G+K ++ Y
Sbjct: 535 LDKGMKTPLIDYNKF 549
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 1/287 (0%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+ T+N L++ +A++ VL LK+ + PN +T+T L+ G C + A + +
Sbjct: 264 VETINCLLDS-LGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
++ QG + +++ ++ GL + + +++L ++ K P+V Y +I CK +
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ A + +MV + P + LI GF +L LL EM K PD TYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+ + + AT + M++ ++P++ T+ +M Y + + + M ++
Sbjct: 443 ALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKK 502
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
G+ P+ SY +I GL EA EM K + + +N
Sbjct: 503 GICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 211/478 (44%), Gaps = 46/478 (9%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSH----------QLEFTG------ 79
+F ++L+ +E GK++ S+V S+ + +S+ +L+F
Sbjct: 183 LFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRM 242
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
D++ N ++ YC + A ++ ++ K+G P +T+ LI G G+ A+
Sbjct: 243 RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAM 302
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ G + ++ +I+GL G +L + RK+ V P+ V + + +
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
++ ++S V M + V+ NSL+ + G+L++A + D + N DV
Sbjct: 363 SCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK----NKDV 418
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
YT+N ++ +C+ G +A + M ++PN++T+ +++ GY + +A +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQR 478
Query: 320 MPQRG-VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
M + G V N ++N +I G + DEAL LF +M +PN+VT SL+
Sbjct: 479 MEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA--- 535
Query: 379 IITYNSLLDALCKSHH---VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
N L + + H + + + I ++ N L D + G ++ ++
Sbjct: 536 ----NLLGAKMVREIHGCVLRRNLDAIHAVK-----------NALTDTYAKSGDIEYSRT 580
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ + TK + T+ +I G G + AL L ++M+ G P+ T +II A
Sbjct: 581 IFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 194/447 (43%), Gaps = 64/447 (14%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQ 175
+P+ T L+ G + A + D + + N ++ +I + + R +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAK 167
Query: 176 LLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFC 235
L R + V PD ++ I+ V ++S ++ + + + NS++ +
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 236 IVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVV 295
G+L A M + DV +N ++ A+C+ GK +EA ++ M K+G+ P +V
Sbjct: 228 KCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
T+ L+ GY + + + A ++ M G+T +V ++ MI+GL M +AL++F +M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 356 DCKNIVPNTVTF-----------------------------------NSLIDGLCK---- 376
+VPN VT NSL+D K
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 377 ------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
++ T+NS++ C++ + KA L +++D ++P++ T+N ++ G
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 463
Query: 425 CEEGRLKNAQEVIQDLLTKG-YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+ G A ++ Q + G T+ ++I G + G DEAL L KM+ + MP+
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 484 AITFETIIRALFEKGENYKAEKLLREM 510
++T I +L N K++RE+
Sbjct: 524 SVT----ILSLLPACANLLGAKMVREI 546
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 191/466 (40%), Gaps = 29/466 (6%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
++ V + + + +P ++ + ++ ++ A+ L ++E GIT D+ T +
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ H A + K+ G PN +T + + + + H V GF
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ + +L++ K G+ L+ RK+ + DV +N++I C+ A+
Sbjct: 384 IDDVLVGNSLVDMYSKCGK----LEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYE 439
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN-INPDVYTYNILVDAF 269
L++ M + P+++T+N++I G+ G EA+ L M + + T+N+++ +
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 499
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
+ GK EA + M PN VT SL+ + + I + +R +
Sbjct: 500 IQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIH 559
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
N + + K ++ + +F M+ K +IIT+NSL+
Sbjct: 560 AVKNALTDTYAKSGDIEYSRTIFLGMETK-------------------DIITWNSLIGGY 600
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYN--ILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
A+AL +++ QGI P+ T + IL GL G + ++V + + +
Sbjct: 601 VLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM--GNVDEGKKVFYSIANDYHII 658
Query: 448 TVRTY-TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
+ + M+ + +EAL + +M P +F T R
Sbjct: 659 PALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCR 704
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 164/365 (44%), Gaps = 59/365 (16%)
Query: 129 LCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPD 188
LC NG + A + D + QG + + +Y L+ G S+ L R + +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSG----SIHLGRILHAR----- 106
Query: 189 VVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
F L++E P V L+ + G + +A + D
Sbjct: 107 --------------------FGLFTE-------PDVFVETKLLSMYAKCGCIADARKVFD 139
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
M +N+ +T++ ++ A+ +E + +E + +MMK GV P+ + ++ G
Sbjct: 140 SMRERNL----FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+V K I + + + G++ ++ N+++ K +D A F M +++ + +N
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV----IAWN 251
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
S++ C++ H ++A+ L+K++ +GI P + T+NIL+ G + G
Sbjct: 252 SVLLAYCQNG-------------KH--EEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+ A +++Q + T G V T+T MI+GL G+ +AL + KM G +P+A+T
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 489 TIIRA 493
+ + A
Sbjct: 357 SAVSA 361
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 124/317 (39%), Gaps = 67/317 (21%)
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK---------------------- 291
NI PD D C+ G + EA L + +QG K
Sbjct: 46 NIIPDEQ-----FDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLG 100
Query: 292 ------------PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
P+V T L+ Y + A+ + +SM +R N+ +++ MI
Sbjct: 101 RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAY 156
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC--------------------KSNI 379
+ E LF M ++P+ F ++ G S +
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
NS+L K +D A +++R++ DV +N ++ C+ G+ + A E++++
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ +G + T+ I+I G + G D A+ L+ KME G D T+ +I L G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 500 NYKAEKLLREMMARGLL 516
Y+A + R+M G++
Sbjct: 333 RYQALDMFRKMFLAGVV 349
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 209/514 (40%), Gaps = 72/514 (14%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I + I SL + +S +L Q++ I D LI+ + SAF VL +
Sbjct: 83 ISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEE 142
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
G + + L+ GL +G A + + +G LN + +G I C+ +
Sbjct: 143 AFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSE 202
Query: 170 TRASLQLLRKIE-GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFN 228
T L+L+ +++ L ++ I+ SLCK + DAF + E+ + P + +
Sbjct: 203 TNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYR 262
Query: 229 SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV------- 281
+ F + G L E +L + + P Y + ++ EA V
Sbjct: 263 VIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSG 322
Query: 282 ---------------------------LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
L M+ G P + T + L C +K+
Sbjct: 323 KFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC---RHDKSD 379
Query: 315 YILNS---MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+++ + + +G +QSY+ MI+ LCK V E+ EM + + P+ +N+LI
Sbjct: 380 HLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALI 439
Query: 372 DGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
+ CK+ N+ TYN L+ L + ++++ L K+ ++GI+
Sbjct: 440 EACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIE 499
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP-VTVRTYTIMINGLCKEGLFDEALT 470
PD Y L++GLC+E +++ A EV + + + + VT R + + LC G EA
Sbjct: 500 PDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQ 559
Query: 471 LLSK---MEDNG-------CMPDAITFETIIRAL 494
LL + +E G C+ DA E IR +
Sbjct: 560 LLREREHLEHTGAHVVLLKCVADAKEVEIGIRHM 593
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 13/226 (5%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D V ++ P I K+ +L + I L G ++ + +++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ C ++ +++ L ++ K+G P+ + LI+ C ++ A + D + +G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+N +Y LI L + G+ SL+L K+ + ++PD +Y ++I+ LCK+T + A
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 211 LYS-------EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
++ + V R+L + + C G EA LL E
Sbjct: 524 VFRKCMERDHKTVTRRVL------SEFVLNLCSNGHSGEASQLLRE 563
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 179/417 (42%), Gaps = 29/417 (6%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
P+++ N + + + SA + ++ G PN+ TF ++K + + Q
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
H HV+ G L+ + +LI+ + G+ L+ K+ K DVV Y +I
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGR----LEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ +A L+ E+ + VV++N++I G+ G KEA+ L +M+ N+ PD T
Sbjct: 213 RGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDEST 268
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+V A + G ++ V + G N+ +L+D Y E+ A + +P
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ +V S+NT+I G + + EAL LF EM PN VT S++ I
Sbjct: 329 YK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
+ ++DK R +G+ L+D + G ++ A +V +L
Sbjct: 385 IGRWIHV-----YIDK--------RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
K ++ ++ MI G G D + L S+M G PD ITF ++ A G
Sbjct: 432 HK----SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 158/359 (44%), Gaps = 28/359 (7%)
Query: 135 VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
+Q+ H ++ G H + LI C + L + + +P+++++NT
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIE-FCILSPHFEGLPYAISVFKTIQEPNLLIWNT 104
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
+ + A LY M+++ +LP+ TF ++ KE + ++
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
+ D+Y + L+ + + G++++A V + +VV+YT+L+ GY + A+
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVF----DKSPHRDVVSYTALIKGYASRGYIENAQ 220
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+ + +P + +V S+N MI+G + EAL LF +M N+ P+ T +++
Sbjct: 221 KLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+S I L + H+ I D G +++ N L+D + G L+ A
Sbjct: 277 AQSGSIE-------LGRQVHL--------WIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ + L K V ++ +I G L+ EAL L +M +G P+ +T +I+ A
Sbjct: 322 GLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 165/422 (39%), Gaps = 67/422 (15%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P F +L S K K + + + G D+ LI+ Y ++ A
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH-- 189
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
K+ K + +++T LIKG G ++ A + D + + + +S+ +I+G +
Sbjct: 190 --KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAE 243
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G + +L+L + + V+PD T++ + + + ++ + ++
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
N+LI + G+L+ A L + + K DV ++N L+ + KEA + M+
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEML 359
Query: 287 KQGVKPNVVT-------------------------------------YTSLMDGYCLVSE 309
+ G PN VT TSL+D Y +
Sbjct: 360 RSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD 419
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ A + NS+ + ++ S+N MI G D + +LF+ M I P+ +TF
Sbjct: 420 IEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVG 475
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
L+ +++ +LD H+ + + +D + P + Y ++D L G
Sbjct: 476 LLSA------CSHSGMLDL---GRHIFRTMT-----QDYKMTPKLEHYGCMIDLLGHSGL 521
Query: 430 LK 431
K
Sbjct: 522 FK 523
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/346 (18%), Positives = 139/346 (40%), Gaps = 54/346 (15%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
++D +F++ SP ++ + ++ + A L ++ D+V+ N
Sbjct: 185 LEDAHKVFDK----SPHRDVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNA 236
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+ Y A + ++K +P+ T T++ +G ++ Q H + G
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F N LI+ K G+ + L ++ K DV+ +NT+I L +A
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEAL 352
Query: 210 NLYSEMVA----------MRILPSVVTFN---------------------------SLIY 232
L+ EM+ + ILP+ SLI
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
+ G ++ A + + ++ K+++ ++N ++ F G+ + ++ + M K G++P
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQR-GVTPNVQSYNTMIN 337
+ +T+ L+ ++ ++I +M Q +TP ++ Y MI+
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 514
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 197/443 (44%), Gaps = 52/443 (11%)
Query: 70 SLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGL 129
SL E + TP + ++L+ CY + F V ++ G+ + IT TLI
Sbjct: 152 SLLDTYEISSSTP--LVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYS 209
Query: 130 CLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
+ + ++ + + + N+I+ +I LCK EG+L +V
Sbjct: 210 SKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCK--------------EGRL--KEV 253
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
V ++D +C R LPSV+ SL++ +++E+++LL
Sbjct: 254 V---DLLDRIC----------------GKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKR 294
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
++ KN+ D Y+I+V A KEG + A V M+++G N YT + C +
Sbjct: 295 LLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
V +A+ +L+ M + GV+P +++N +I G + ++ L M + ++P+ FN
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
++ ++ K +V++A ++ K D+G PD TY+ L+ G E
Sbjct: 415 MVK---------------SVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET 489
+ A ++ ++ + + +I GLC G + L M+ P+A ++
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 490 IIRALFEKGENYKAEKLLREMMA 512
+I+A + G+ A+++ EM++
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMIS 542
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 142/325 (43%), Gaps = 15/325 (4%)
Query: 189 VVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
V+ NT+I K + + +Y + RI P+ +T +I C G+LKE + LLD
Sbjct: 199 VITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLD 258
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
+ K P V LV +E +++E+ ++L ++ + + + + Y+ ++
Sbjct: 259 RICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEG 318
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
++ A+ + + M QRG + N Y + C+ V EA L +EM+ + P TFN
Sbjct: 319 DLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFN 378
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
LI G + +K + + + +G+ P +N ++ + +
Sbjct: 379 CLIGGFARFG---------------WEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIE 423
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
+ A E++ + KG+ TY+ +I G + D+AL L +ME P F
Sbjct: 424 NVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFR 483
Query: 489 TIIRALFEKGENYKAEKLLREMMAR 513
++I L G+ EK L+ M R
Sbjct: 484 SLIVGLCTCGKVEAGEKYLKIMKKR 508
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 138/309 (44%), Gaps = 17/309 (5%)
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE-MVTKNINPDVYTYNILV 266
F+++ + SV+T N+LI+ + ++ + + + E + K I P+ T I++
Sbjct: 183 GFDVFKRLCDCGFTLSVITLNTLIH-YSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMI 241
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
CKEG++KE ++L + + P+V+ TSL+ + ++ +L + + +
Sbjct: 242 QVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMV 301
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLL 386
+ Y+ ++ +A+ ++V F+ ++ +N Y +
Sbjct: 302 VDTIGYSIVV---------------YAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 387 DALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP 446
C+ V +A L+ ++ + G+ P T+N L+ G G + E + ++T+G
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 447 VTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKL 506
+ + M+ + K + A +L+K D G +PD T+ +IR E + +A KL
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 507 LREMMARGL 515
EM R +
Sbjct: 467 FYEMEYRKM 475
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+++ +S+ RLL + I + ++ + K +A + ++ G + +
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+ + C + + A +L+++ + G P TF LI G G + L++ + +V +
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + ++ ++ + K+ + ++L K K PD Y+ +I + + A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ EM ++ P F SLI G C G+++ L M + I P+ Y+ L+ A
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 269 FCKEGKVKEATNVLAVMM 286
F K G A V M+
Sbjct: 524 FQKIGDKTNADRVYNEMI 541
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS------ 377
G T +V + NT+I+ K K+ D ++ K I PN +T +I LCK
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEV 253
Query: 378 --------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
++I SL+ + + ++++++L+K++ + + D Y+I++
Sbjct: 254 VDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYA 313
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+EG L +A++V ++L +G+ YT+ + C++G EA LLS+ME++G P
Sbjct: 314 KAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPY 373
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGLL 516
TF +I G K + M+ RGL+
Sbjct: 374 DETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ P N ++ + A +L K + KG+ P+ T++ LI+G + A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 139 LQ-FHD---HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
L+ F++ ++ GF + + +LI GLC G+ A + L+ ++ +L++P+ +Y+
Sbjct: 464 LKLFYEMEYRKMSPGFEV----FRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDA 519
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMR 219
+I + K T+A +Y+EM+++R
Sbjct: 520 LIKAFQKIGDKTNADRVYNEMISVR 544
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 24/338 (7%)
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC----KDTLVTDAFNLY 212
Y LI+ + K GQTR ++ L +++ +PD +YN +I + K +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 213 SEMVAM-RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+M + R P+VVT+N L+ F G++ + AL ++ ++PDVYT+N ++DA+ K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G +KE VL M KP+++T+ L+D Y E K + S+ + P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI--DGLCKSNIITYNSLLDAL 389
+N+MI K +M+D+A +F +M+ N +P+ +T+ +I G C S + + + +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS-VSRAREIFEEV 374
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+S V KA L N +++ C G A ++ +
Sbjct: 375 GESDRVLKASTL----------------NAMLEVYCRNGLYIEADKLFHNASAFRVHPDA 418
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
TY + K + ++ L+ KME +G +P+ F
Sbjct: 419 STYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 162/365 (44%), Gaps = 25/365 (6%)
Query: 160 LINGLCKMGQTRASLQLLRKIEG-KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
L L K + L++ R ++ + PD +Y+ +I + K A L+SEM
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAI----ALLDEMVT-KNINPDVYTYNILVDAFCKEG 273
P +N+LI +A+ LD+M + P+V TYNIL+ AF + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
KV + + + V P+V T+ +MD Y + + + +L M P++ ++N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
+I+ K + F +M+ TF SL+ K + T+NS++ K+
Sbjct: 283 VLIDSYGKKQE-------FEKME--------QTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYN--ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+DKA + KK+ D P TY I+M G C G + A+E+ +++ + T
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKAST 385
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
M+ C+ GL+ EA L PDA T++ + +A + + + L+++M
Sbjct: 386 LNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKME 445
Query: 512 ARGLL 516
G++
Sbjct: 446 KDGIV 450
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 144/373 (38%), Gaps = 59/373 (15%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ K+++ + K A+ L +++ +G PD N LI + H A + L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 112 KKGY-----QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
K QPN +T+ L++ +G+V D V A
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKV-------DQVNA------------------- 229
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
L + ++ V PDV +N ++D+ K+ ++ + + + M + P ++T
Sbjct: 230 ---------LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
FN LI + + ++ ++ P + T+N ++ + K + +A V M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 287 KQGVKPNVVTYTS--LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
P+ +TY +M GYC V++A+ I + + + N M+ C+ +
Sbjct: 341 DMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
EA LF + P+ TY L A K+ ++ L+KK
Sbjct: 399 YIEADKLFHNASAFRVHPDAS---------------TYKFLYKAYTKADMKEQVQILMKK 443
Query: 405 IRDQGIQPDVRTY 417
+ GI P+ R +
Sbjct: 444 MEKDGIVPNKRFF 456
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ + +L + + +L L+ + ++PD+ T N +++ Y I +V
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ +P+ ITF LI SYG K
Sbjct: 266 LTRMRSNECKPDIITFNVLID----------------------------SYGKK-QEFEK 296
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
M QT S L+R E KP + +N++I + K ++ A ++ +M M +PS +T
Sbjct: 297 MEQTFKS--LMRSKE----KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 227 FNSLI--YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
+ +I YG+C G + A + +E+ + T N +++ +C+ G EA +
Sbjct: 351 YECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHN 408
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
V P+ TY L Y + + ++ M + G+ PN
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 24/338 (7%)
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC----KDTLVTDAFNLY 212
Y LI+ + K GQTR ++ L +++ +PD +YN +I + K +
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 213 SEMVAM-RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
+M + R P+VVT+N L+ F G++ + AL ++ ++PDVYT+N ++DA+ K
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
G +KE VL M KP+++T+ L+D Y E K + S+ + P + +
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPT 315
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI--DGLCKSNIITYNSLLDAL 389
+N+MI K +M+D+A +F +M+ N +P+ +T+ +I G C S + + + +
Sbjct: 316 FNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS-VSRAREIFEEV 374
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
+S V KA L N +++ C G A ++ +
Sbjct: 375 GESDRVLKASTL----------------NAMLEVYCRNGLYIEADKLFHNASAFRVHPDA 418
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
TY + K + ++ L+ KME +G +P+ F
Sbjct: 419 STYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFF 456
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 162/365 (44%), Gaps = 25/365 (6%)
Query: 160 LINGLCKMGQTRASLQLLRKIEG-KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
L L K + L++ R ++ + PD +Y+ +I + K A L+SEM
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAI----ALLDEMVT-KNINPDVYTYNILVDAFCKEG 273
P +N+LI +A+ LD+M + P+V TYNIL+ AF + G
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
KV + + + V P+V T+ +MD Y + + + +L M P++ ++N
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSH 393
+I+ K + F +M+ TF SL+ K + T+NS++ K+
Sbjct: 283 VLIDSYGKKQE-------FEKME--------QTFKSLMRSKEKPTLPTFNSMIINYGKAR 327
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYN--ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
+DKA + KK+ D P TY I+M G C G + A+E+ +++ + T
Sbjct: 328 MIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKAST 385
Query: 452 YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
M+ C+ GL+ EA L PDA T++ + +A + + + L+++M
Sbjct: 386 LNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKME 445
Query: 512 ARGLL 516
G++
Sbjct: 446 KDGIV 450
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 144/373 (38%), Gaps = 59/373 (15%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+ K+++ + K A+ L +++ +G PD N LI + H A + L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYL 195
Query: 112 KKGY-----QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
K QPN +T+ L++ +G+V D V A
Sbjct: 196 DKMKGIERCQPNVVTYNILLRAFAQSGKV-------DQVNA------------------- 229
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
L + ++ V PDV +N ++D+ K+ ++ + + + M + P ++T
Sbjct: 230 ---------LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIIT 280
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
FN LI + + ++ ++ P + T+N ++ + K + +A V M
Sbjct: 281 FNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMN 340
Query: 287 KQGVKPNVVTYTS--LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
P+ +TY +M GYC V++A+ I + + + N M+ C+ +
Sbjct: 341 DMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
EA LF + P+ TY L A K+ ++ L+KK
Sbjct: 399 YIEADKLFHNASAFRVHPDAS---------------TYKFLYKAYTKADMKEQVQILMKK 443
Query: 405 IRDQGIQPDVRTY 417
+ GI P+ R +
Sbjct: 444 MEKDGIVPNKRFF 456
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P ++ + +L + + +L L+ + ++PD+ T N +++ Y I +V
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L ++ +P+ ITF LI SYG K
Sbjct: 266 LTRMRSNECKPDIITFNVLID----------------------------SYGKK-QEFEK 296
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
M QT S L+R E KP + +N++I + K ++ A ++ +M M +PS +T
Sbjct: 297 MEQTFKS--LMRSKE----KPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 227 FNSLI--YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
+ +I YG+C G + A + +E+ + T N +++ +C+ G EA +
Sbjct: 351 YECMIMMYGYC--GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHN 408
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
V P+ TY L Y + + ++ M + G+ PN
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ +L + K + L ++ G P+ VT N LI+ Y + A +V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ +T+ TLI G + A+ + + A G + +Y +IN L K G A+
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL--IY 232
+L ++ + P++V YN ++D K +A LY +M P VT++ + +
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G C G L+EA A+ EM KN PD Y +LVD + K G V++A M+ G++P
Sbjct: 550 GHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI----NGLCKIKM 344
NV T SL+ + V+++ +A +L +M G+ P++Q+Y ++ +G K+ M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+ +++ Q LLDEMV P+ TYN L+ ++ + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+ G KP+ VTY +L+D + ++ A + M G++P+ +Y+ +IN L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
A LF EM +D C N++TYN ++D K+ + A+ L + +
Sbjct: 486 PAAHKLFCEM---------------VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
++ G +PD TY+I+M+ L G L+ A+ V ++ K + Y ++++ K G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++A M G P+ T +++ + +A +LL+ M+A GL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 20/322 (6%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ G++ + T+TT++ L Q + D +V G N ++Y LI+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + +++ KPD V Y T+ID K + A ++Y M A + P T++ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G L A L EMV + P++ TYNI++D K + A + M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 292 PNVVTYTSLMD--GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+ VTY+ +M+ G+C E +A+ + M Q+ P+ Y +++ K V++A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ M L GL + N+ T NSLL + + + +A L++ + G
Sbjct: 595 QWYQAM--------------LHAGL-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 410 IQPDVRTYNILMDGLCEEGRLK 431
++P ++TY +L+ C +GR K
Sbjct: 640 LRPSLQTYTLLLS-CCTDGRSK 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 177/392 (45%), Gaps = 35/392 (8%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ + ++R P + + +++ S + + + A+++ +Q++ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A + ++ G P+T T++ +I L G + A + +V QG N +
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y +++ K + +L+L R ++ +PD V Y+ +++ L + +A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+P + L+ + G +++A M+ + P+V T N L+ F + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMD-----------GYC---LVSEVNKAKYILNSMP 321
EA +L M+ G++P++ TYT L+ G+C + S + A L MP
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMP 685
Query: 322 QRGVT-PNVQSY--------------------NTMINGLCKIKMVDEALNLFAEMDCKNI 360
G NV+++ + +++ L K +EA +++ KN+
Sbjct: 686 AAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNV 745
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
P+ + S L ++++ + + AL ++
Sbjct: 746 FPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ +++FN++ P + + ++ K A+ + +++ G++PD T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+INC + +A + +++ +G PN +T+ ++ Q AL+ + + G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F ++++Y ++ L G + + +++ K PD +Y ++D K V A+
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
Y M+ + P+V T NSL+ F V ++ EA LL M+ + P + TY +L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 270 CKEGKVK 276
C +G+ K
Sbjct: 654 CTDGRSK 660
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 114/230 (49%), Gaps = 15/230 (6%)
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G K + TYT+++ + +L+ M + G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA+N+F +M + CK + +TY +L+D K+ +D A+ + ++++
Sbjct: 417 EAMNVFNQMQ---------------EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
G+ PD TY+++++ L + G L A ++ +++ +G + TY IM++ K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
AL L M++ G PD +T+ ++ L G +AE + EM + +
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 209/451 (46%), Gaps = 84/451 (18%)
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
F+++ I +P LI LC G++ A + D + + + +++ +I G
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
K+G R + +L +++ + +VV + ++ + ++ A L+ EM +
Sbjct: 87 YIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----N 139
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
VV++N++I G+ G++ +A+ L DEM +NI ++N +V A + G++ EA N+
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFE 195
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M ++ +VV++T+++DG +V++A+ + + MP+R N+ S+N MI G +
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNN 247
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------NIITYNSLLD 387
+DEA LF M ++ ++N++I G ++ N+I++ +++
Sbjct: 248 RIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMIT 303
Query: 388 ALCKSHHVDKAIALIKK-IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK--- 443
++ ++A+ + K +RD ++P+V TY ++ + L Q++ Q L++K
Sbjct: 304 GYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ-LISKSVH 362
Query: 444 -----------------GYPVTVR--------------TYTIMINGLCKEGLFDEALTLL 472
G + R ++ MI G EA+ +
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMY 422
Query: 473 SKMEDNGCMPDAITFETIIRA-----LFEKG 498
++M +G P A+T+ ++ A L EKG
Sbjct: 423 NQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 217/490 (44%), Gaps = 94/490 (19%)
Query: 31 DDVVSIFNRLLRM----SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITP-DIV 85
D V +FN L+R S P + + ++ L K+ + A L F G+ D+V
Sbjct: 25 DRSVQLFN-LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKL-----FDGLPERDVV 78
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
T +I Y + A + ++ + N +T+T ++ G + Q+ A +
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEM 135
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+ N +S+ T+I+G + G+ +L+L ++ + ++V +N+++ +L + +
Sbjct: 136 PER----NVVSWNTMIDGYAQSGRIDKALELF----DEMPERNIVSWNSMVKALVQRGRI 187
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+A NL+ M VV++ +++ G G++ EA L D M +NI ++N +
Sbjct: 188 DEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAM 239
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ + + ++ EA + VM ++ + ++ +++ G+ E+NKA + + MP++
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK-- 293
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNS----------LIDG- 373
NV S+ TMI G + K +EALN+F++M ++ PN T+ S L++G
Sbjct: 294 --NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 374 ------------------------------------------LCKSNIITYNSLLDALCK 391
+C+ ++I++NS++
Sbjct: 352 QIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAH 411
Query: 392 SHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT-KGYPVTVR 450
H +AI + ++R G +P TY L+ G ++ E +DL+ + P+
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 451 TYTIMINGLC 460
YT +++ LC
Sbjct: 472 HYTCLVD-LC 480
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 158/322 (49%), Gaps = 43/322 (13%)
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
FNL + + P V LI C VG++ EA L D + + DV T+ ++
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITG 86
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ K G ++EA + + + NVVT+T+++ GY +++ A+ + MP+R N
Sbjct: 87 YIKLGDMREARELFD---RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----N 139
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------------- 375
V S+NTMI+G + +D+AL LF EM +NI V++NS++ L
Sbjct: 140 VVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFE 195
Query: 376 ---KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
+ +++++ +++D L K+ VD+A +++ D + ++ ++N ++ G + R+
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEA----RRLFDCMPERNIISWNAMITGYAQNNRIDE 251
Query: 433 AQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
A ++ Q + + + ++ MI G + ++A L +M + + I++ T+I
Sbjct: 252 ADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMIT 303
Query: 493 ALFEKGENYKAEKLLREMMARG 514
E EN +A + +M+ G
Sbjct: 304 GYVENKENEEALNVFSKMLRDG 325
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ +L + K + L ++ G P+ VT N LI+ Y + A +V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ +T+ TLI G + A+ + + A G + +Y +IN L K G A+
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL--IY 232
+L ++ + P++V YN ++D K +A LY +M P VT++ + +
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G C G L+EA A+ EM KN PD Y +LVD + K G V++A M+ G++P
Sbjct: 550 GHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI----NGLCKIKM 344
NV T SL+ + V+++ +A +L +M G+ P++Q+Y ++ +G K+ M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+ +++ Q LLDEMV P+ TYN L+ ++ + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+ G KP+ VTY +L+D + ++ A + M G++P+ +Y+ +IN L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
A LF EM +D C N++TYN ++D K+ + A+ L + +
Sbjct: 486 PAAHKLFCEM---------------VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
++ G +PD TY+I+M+ L G L+ A+ V ++ K + Y ++++ K G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++A M G P+ T +++ + +A +LL+ M+A GL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 20/322 (6%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ G++ + T+TT++ L Q + D +V G N ++Y LI+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + +++ KPD V Y T+ID K + A ++Y M A + P T++ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G L A L EMV + P++ TYNI++D K + A + M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 292 PNVVTYTSLMD--GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+ VTY+ +M+ G+C E +A+ + M Q+ P+ Y +++ K V++A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ M L GL + N+ T NSLL + + + +A L++ + G
Sbjct: 595 QWYQAM--------------LHAGL-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 410 IQPDVRTYNILMDGLCEEGRLK 431
++P ++TY +L+ C +GR K
Sbjct: 640 LRPSLQTYTLLLS-CCTDGRSK 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 177/392 (45%), Gaps = 35/392 (8%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ + ++R P + + +++ S + + + A+++ +Q++ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A + ++ G P+T T++ +I L G + A + +V QG N +
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y +++ K + +L+L R ++ +PD V Y+ +++ L + +A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+P + L+ + G +++A M+ + P+V T N L+ F + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMD-----------GYC---LVSEVNKAKYILNSMP 321
EA +L M+ G++P++ TYT L+ G+C + S + A L MP
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMP 685
Query: 322 QRGV-TPNVQSY--------------------NTMINGLCKIKMVDEALNLFAEMDCKNI 360
G NV+++ + +++ L K +EA +++ KN+
Sbjct: 686 AAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNV 745
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
P+ + S L ++++ + + AL ++
Sbjct: 746 FPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ +++FN++ P + + ++ K A+ + +++ G++PD T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+INC + +A + +++ +G PN +T+ ++ Q AL+ + + G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F ++++Y ++ L G + + +++ K PD +Y ++D K V A+
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
Y M+ + P+V T NSL+ F V ++ EA LL M+ + P + TY +L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 270 CKEGKVK 276
C +G+ K
Sbjct: 654 CTDGRSK 660
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 114/230 (49%), Gaps = 15/230 (6%)
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G K + TYT+++ + +L+ M + G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA+N+F +M + CK + +TY +L+D K+ +D A+ + ++++
Sbjct: 417 EAMNVFNQMQ---------------EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
G+ PD TY+++++ L + G L A ++ +++ +G + TY IM++ K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
AL L M++ G PD +T+ ++ L G +AE + EM + +
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 149/296 (50%), Gaps = 8/296 (2%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ +L + K + L ++ G P+ VT N LI+ Y + A +V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ +T+ TLI G + A+ + + A G + +Y +IN L K G A+
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL--IY 232
+L ++ + P++V YN ++D K +A LY +M P VT++ + +
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
G C G L+EA A+ EM KN PD Y +LVD + K G V++A M+ G++P
Sbjct: 550 GHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI----NGLCKIKM 344
NV T SL+ + V+++ +A +L +M G+ P++Q+Y ++ +G K+ M
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDM 663
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 15/290 (5%)
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+ +++ Q LLDEMV P+ TYN L+ ++ + + EA NV M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+ G KP+ VTY +L+D + ++ A + M G++P+ +Y+ +IN L K +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
A LF EM +D C N++TYN ++D K+ + A+ L + +
Sbjct: 486 PAAHKLFCEM---------------VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 530
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
++ G +PD TY+I+M+ L G L+ A+ V ++ K + Y ++++ K G
Sbjct: 531 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 590
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++A M G P+ T +++ + +A +LL+ M+A GL
Sbjct: 591 EKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGL 640
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 150/322 (46%), Gaps = 20/322 (6%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ G++ + T+TT++ L Q + D +V G N ++Y LI+ +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + +++ KPD V Y T+ID K + A ++Y M A + P T++ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G L A L EMV + P++ TYNI++D K + A + M G +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 292 PNVVTYTSLMD--GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
P+ VTY+ +M+ G+C E +A+ + M Q+ P+ Y +++ K V++A
Sbjct: 537 PDKVTYSIVMEVLGHCGYLE--EAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ M L GL + N+ T NSLL + + + +A L++ + G
Sbjct: 595 QWYQAM--------------LHAGL-RPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 410 IQPDVRTYNILMDGLCEEGRLK 431
++P ++TY +L+ C +GR K
Sbjct: 640 LRPSLQTYTLLLS-CCTDGRSK 660
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 177/392 (45%), Gaps = 35/392 (8%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ + ++R P + + +++ S + + + A+++ +Q++ G PD VT LI+ +
Sbjct: 386 LLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHA 445
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+ A + ++ G P+T T++ +I L G + A + +V QG N +
Sbjct: 446 KAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y +++ K + +L+L R ++ +PD V Y+ +++ L + +A +++EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+P + L+ + G +++A M+ + P+V T N L+ F + K+
Sbjct: 566 QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMD-----------GYC---LVSEVNKAKYILNSMP 321
EA +L M+ G++P++ TYT L+ G+C + S + A L MP
Sbjct: 626 AEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMP 685
Query: 322 QRGV-TPNVQSY--------------------NTMINGLCKIKMVDEALNLFAEMDCKNI 360
G NV+++ + +++ L K +EA +++ KN+
Sbjct: 686 AAGPDGENVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNV 745
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
P+ + S L ++++ + + AL ++
Sbjct: 746 FPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+++ +++FN++ P + + ++ K A+ + +++ G++PD T ++
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+INC + +A + +++ +G PN +T+ ++ Q AL+ + + G
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG 534
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
F ++++Y ++ L G + + +++ K PD +Y ++D K V A+
Sbjct: 535 FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
Y M+ + P+V T NSL+ F V ++ EA LL M+ + P + TY +L+
Sbjct: 595 QWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC- 653
Query: 270 CKEGKVK 276
C +G+ K
Sbjct: 654 CTDGRSK 660
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 114/230 (49%), Gaps = 15/230 (6%)
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G K + TYT+++ + +L+ M + G PN +YN +I+ + ++
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA+N+F +M + CK + +TY +L+D K+ +D A+ + ++++
Sbjct: 417 EAMNVFNQMQ---------------EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 461
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
G+ PD TY+++++ L + G L A ++ +++ +G + TY IM++ K +
Sbjct: 462 AGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
AL L M++ G PD +T+ ++ L G +AE + EM + +
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 177/406 (43%), Gaps = 28/406 (6%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P I +L + ++ Y + L + GI P+I+T N++ Y + A
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 107 LAKILKKG-YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ P+ TF L+KGL N ++ A++ + + +GF ++ + Y L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 166 KMGQTRASLQLLRKIEGKL--VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA--MRIL 221
K L+L ++++ KL D V+Y ++ + +A Y E V ++
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 222 PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY------TYNILVDAFCKEGKV 275
S + +N ++ G+ EA+ L D V K NP + T+N++V+ +C GK
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFD-AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKF 366
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
+EA V M P+ +++ +LM+ C + +A+ + M ++ V P+ +Y +
Sbjct: 367 EEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLL 426
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHV 395
++ K +DE + M N+ P N+ YN L D L K+ +
Sbjct: 427 MDTCFKEGKIDEGAAYYKTMVESNLRP---------------NLAVYNRLQDQLIKAGKL 471
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
D A + + + ++ D Y +M L E GRL +++ ++L
Sbjct: 472 DDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 155/355 (43%), Gaps = 35/355 (9%)
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS---LCKDTLVTDAFNLYSEM 215
T++ + + A LQL I + P+++ YN I + + K + + + L+ +
Sbjct: 135 TVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDN 194
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN--INPDVYTYNILVDAFCKEG 273
+ PS+ TF L+ G L++A+ + ++M K ++P VY+Y ++ G
Sbjct: 195 APLN--PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM-------G 245
Query: 274 KVK--EATNVLAVMMK-----QGVKPNVVTYTSLMDGYCLVSEVNKAK---YILNSMPQR 323
VK +A VL + + G + V Y LM GY + E+ K Y
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY-FMKEMEKEAMECYEEAVGENS 304
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
V + +YN ++ L + DEAL LF + ++ P + N + T+N
Sbjct: 305 KVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVN----------LGTFN 354
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+++ C ++A+ + +++ D PD ++N LM+ LC+ L A+++ ++ K
Sbjct: 355 VMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEK 414
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
TY ++++ KEG DE M ++ P+ + + L + G
Sbjct: 415 NVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAG 469
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 19/329 (5%)
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
D YN+++ L K ++ EM +L ++ TF + F + K+A+ +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIF 251
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+ M V T N L+D+ + KEA VL +K+ PN++TYT L++G+C V
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRV 310
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+ +A I N M G+ P++ ++N M+ GL + +A+ LF M K PN
Sbjct: 311 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN---- 366
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
+ +Y ++ CK ++ AI + D G+QPD Y L+ G +
Sbjct: 367 -----------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
+L E+++++ KG+P +TY +I + + + + + +KM N P TF
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 488 ETIIRALFEKGENYK-AEKLLREMMARGL 515
I+++ F NY+ + EM+ +G+
Sbjct: 476 NMIMKSYF-VARNYEMGRAVWDEMIKKGI 503
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 173/387 (44%), Gaps = 18/387 (4%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G+ ++ T+ +++ L Q +T + + + +G L ++ + + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 245
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + ++ K V N ++DSL + L +A L+ ++ R P+++T+ L+
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLL 304
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G+C V L EA + ++M+ + PD+ +N++++ + K +A + VM +G
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNV +YT ++ +C S + A + M G+ P+ Y +I G K +D L
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
EM K P+ T+N+LI + + + + + K+ I+
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT---------------RIYNKMIQNEIE 469
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
P + T+N++M + + V +++ KG +YT++I GL EG EA
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 529
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKG 498
L +M D G I + A F +G
Sbjct: 530 LEEMLDKGMKTPLIDYNKFA-ADFHRG 555
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 175/371 (47%), Gaps = 21/371 (5%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
E G D T N +++ Q + SVL ++ KG TFT +K +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 244
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ A+ + + F + + L++ L + + + L K++ + P+++ Y +
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVL 303
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
++ C+ + +A ++++M+ + P +V N ++ G + +AI L M +K
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+V +Y I++ FCK+ ++ A M+ G++P+ YT L+ G+ +++
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M ++G P+ ++YN +I + KM + ++ +M I P+ TFN ++
Sbjct: 424 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM---- 479
Query: 376 KSNIITYNSLLDALCKSHHVDKAI--ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
KS + N + + +A+ +IKK GI PD +Y +L+ GL EG+ + A
Sbjct: 480 KSYFVARN---------YEMGRAVWDEMIKK----GICPDDNSYTVLIRGLISEGKSREA 526
Query: 434 QEVIQDLLTKG 444
++++L KG
Sbjct: 527 CRYLEEMLDKG 537
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 123/255 (48%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP ++ + +L ++++ A + + + G+ PDIV N+++ + + A
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 353
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ + KG PN ++T +I+ C ++TA+++ D +V G + Y LI G
Sbjct: 354 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 413
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ +LL++++ K PD YN +I + + +Y++M+ I PS+
Sbjct: 414 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 473
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
TFN ++ + + + A+ DEM+ K I PD +Y +L+ EGK +EA L M
Sbjct: 474 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Query: 286 MKQGVKPNVVTYTSL 300
+ +G+K ++ Y
Sbjct: 534 LDKGMKTPLIDYNKF 548
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 1/287 (0%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+ T+N L++ +A++ VL LK+ + PN +T+T L+ G C + A + +
Sbjct: 263 VETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
++ G + +++ ++ GL + + +++L ++ K P+V Y +I CK +
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ A + +MV + P + LI GF +L LL EM K PD TYN
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+ + + T + M++ ++P++ T+ +M Y + + + + M ++
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 501
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
G+ P+ SY +I GL EA EM K + + +N
Sbjct: 502 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 548
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 152/325 (46%), Gaps = 19/325 (5%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
YN+++ L K ++ EM +L ++ TF + F + K+A+ + + M
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
V T N L+D+ + KEA VL +K+ PN++TYT L++G+C V +
Sbjct: 257 KYKFKIGVETINCLLDSLGRAKLGKEA-QVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+A I N M G+ P++ ++N M+ GL + +A+ LF M K PN
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN-------- 367
Query: 372 DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ +Y ++ CK ++ AI + D G+QPD Y L+ G + +L
Sbjct: 368 -------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLD 420
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
E+++++ KG+P +TY +I + + + + + +KM N P TF I+
Sbjct: 421 TVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM 480
Query: 492 RALFEKGENYK-AEKLLREMMARGL 515
++ F NY+ + EM+ +G+
Sbjct: 481 KSYF-VARNYEMGRAVWDEMIKKGI 504
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 172/387 (44%), Gaps = 18/387 (4%)
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
++G+ + T+ +++ L Q +T + + + +G L ++ + + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERK 246
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ + ++ K V N ++DSL + L +A L+ ++ R P+++T+ L+
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE-RFTPNMMTYTVLL 305
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G+C V L EA + ++M+ + PD+ +N++++ + K +A + VM +G
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
PNV +YT ++ +C S + A + M G+ P+ Y +I G K +D L
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
EM K P+ T+N+LI + + + + + K+ I+
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT---------------RIYNKMIQNEIE 470
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
P + T+N++M + + V +++ KG +YT++I GL EG EA
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRY 530
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKG 498
L +M D G I + A F +G
Sbjct: 531 LEEMLDKGMKTPLIDYNKFA-ADFHRG 556
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 174/371 (46%), Gaps = 21/371 (5%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
E G T N +++ Q + SVL ++ KG TFT +K +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKER 245
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+ A+ + + F + + L++ L + + + L K++ + P+++ Y +
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT-PNMMTYTVL 304
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
++ C+ + +A ++++M+ + P +V N ++ G + +AI L M +K
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 364
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P+V +Y I++ FCK+ ++ A M+ G++P+ YT L+ G+ +++
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+L M ++G P+ ++YN +I + KM + ++ +M I P+ TFN ++
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIM---- 480
Query: 376 KSNIITYNSLLDALCKSHHVDKAI--ALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
KS + N + + +A+ +IKK GI PD +Y +L+ GL EG+ + A
Sbjct: 481 KSYFVARN---------YEMGRAVWDEMIKK----GICPDDNSYTVLIRGLISEGKSREA 527
Query: 434 QEVIQDLLTKG 444
++++L KG
Sbjct: 528 CRYLEEMLDKG 538
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 123/255 (48%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP ++ + +L ++++ A + + + G+ PDIV N+++ + + A
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK 354
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ + KG PN ++T +I+ C ++TA+++ D +V G + Y LI G
Sbjct: 355 LFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 166 KMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
+ +LL++++ K PD YN +I + + +Y++M+ I PS+
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIH 474
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
TFN ++ + + + A+ DEM+ K I PD +Y +L+ EGK +EA L M
Sbjct: 475 TFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Query: 286 MKQGVKPNVVTYTSL 300
+ +G+K ++ Y
Sbjct: 535 LDKGMKTPLIDYNKF 549
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 130/287 (45%), Gaps = 1/287 (0%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+ T+N L++ +A++ VL LK+ + PN +T+T L+ G C + A + +
Sbjct: 264 VETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
++ G + +++ ++ GL + + +++L ++ K P+V Y +I CK +
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ A + +MV + P + LI GF +L LL EM K PD TYN
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+ + + T + M++ ++P++ T+ +M Y + + + + M ++
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKK 502
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
G+ P+ SY +I GL EA EM K + + +N
Sbjct: 503 GICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKF 549
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 19/255 (7%)
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
TYN ++ K + + +VL M +G+ + T+T M + E KA I M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-SNI 379
+ V++ N +++ L + K+ EA LF ++ + PN +T+ L++G C+ N+
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNL 314
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
I +A + + D G++PD+ +N++++GL + +A ++
Sbjct: 315 I----------------EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ +KG VR+YTIMI CK+ + A+ M D+G PDA + +I + +
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKK 418
Query: 500 NYKAEKLLREMMARG 514
+LL+EM +G
Sbjct: 419 LDTVYELLKEMQEKG 433
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 166/357 (46%), Gaps = 20/357 (5%)
Query: 133 GQVQTALQFH---DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
G+++ +FH D + + +N+ +Y L+N + ++ + + + + D+
Sbjct: 154 GKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDL 213
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
V ++ ++ LC+ V A L+ + N ++ G+C++G + EA +
Sbjct: 214 VAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKD 272
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
++ PDV +Y +++A K+GK+ +A + M P+V +++D C
Sbjct: 273 IIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKR 332
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ +A + + ++G PNV +YN+++ LCKI+ ++ L EM+ K
Sbjct: 333 IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG---------- 382
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
G C N +T++ LL +S VD + + K + + + D+ YN++ + +
Sbjct: 383 ---GSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCE-MTSDL--YNLMFRLYVQWDK 436
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
+ +E+ ++ G RTYTI I+GL +G EAL+ +M G +P+ T
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 152/343 (44%), Gaps = 45/343 (13%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISL--SHQLEFTGITPDIV 85
H VD+ V +F R ++ F +L L + KH A +L S + EF DI
Sbjct: 192 HKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC---DIK 248
Query: 86 TLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
+N+++N G C+ G V A +F +
Sbjct: 249 AMNMILN-----------------------------------GWCVLGNVHEAKRFWKDI 273
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+A + +SYGT+IN L K G+ +++L R + PDV + N +ID+LC +
Sbjct: 274 IASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRI 333
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK--NINPDVYTYN 263
+A ++ E+ P+VVT+NSL+ C + + ++ L++EM K + +P+ T++
Sbjct: 334 PEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS 393
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+ + K+ VL M K + Y + Y + K + I + M +
Sbjct: 394 YLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERS 450
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
G+ P+ ++Y I+GL + EAL+ F EM K +VP T
Sbjct: 451 GLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 26/349 (7%)
Query: 190 VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
++YN I+D L K + ++ EM + T+ L+ + ++ EA+ + +
Sbjct: 144 MLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFER 203
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
I+ D+ ++ L+ C+ V E L ++ ++ +++G+C++
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHV-EFAETLFCSRRREFGCDIKAMNMILNGWCVLGN 262
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
V++AK + P+V SY TMIN L K + +A+ L+ M P+ N+
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 370 LIDGLC--------------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ID LC N++TYNSLL LCK +K L++++ +G
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 410 --IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
P+ T++ L L R K+ V++ + +T Y +M + ++
Sbjct: 383 GSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 468 ALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ S+ME +G PD T+ I L KG+ +A +EMM++G++
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 133/274 (48%), Gaps = 18/274 (6%)
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
L S + +N ++ + + +E + DEM ++ + TY +L++ + KV EA
Sbjct: 140 LSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVG 199
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
V + G+ ++V + L+ C V A+ + S +R ++++ N ++NG C
Sbjct: 200 VFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR-RREFGCDIKAMNMILNGWC 258
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIA 400
+ V EA + + +I C+ ++++Y ++++AL K + KA+
Sbjct: 259 VLGNVHEAKRFWKD---------------IIASKCRPDVVSYGTMINALTKKGKLGKAME 303
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
L + + D PDV+ N ++D LC + R+ A EV +++ KG V TY ++ LC
Sbjct: 304 LYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLC 363
Query: 461 KEGLFDEALTLLSKMEDNG--CMPDAITFETIIR 492
K ++ L+ +ME G C P+ +TF +++
Sbjct: 364 KIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK 397
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 106/239 (44%), Gaps = 5/239 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NV + + ++ P ++ +G ++ +L K A+ L + T PD+ N
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I+ C + +I A V +I +KG PN +T+ +L+K LC + + + + + +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 149 GFHL--NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
G N +++ L+ + L+ + K + ++ +YN + +
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSD---LYNLMFRLYVQWDKEE 438
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
++SEM + P T+ I+G G++ EA++ EM++K + P+ T +L
Sbjct: 439 KVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 17/291 (5%)
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
T+ +++ Q E LLDEMV P+ TYN L+ ++ + +KEA NV M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
+ G +P+ VTY +L+D + ++ A + M + G++P+ +Y+ +IN L K +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL-CKSHHVDKAIALIKK 404
A LF EM + PN VTFN +I AL K+ + + A+ L +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMI----------------ALHAKARNYETALKLYRD 524
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
+++ G QPD TY+I+M+ L G L+ A+ V ++ K + Y ++++ K G
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D+A M G P+ T +++ +A LL+ M+A GL
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 149/315 (47%), Gaps = 11/315 (3%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLV----KMKHYSTAISLSHQLEFTGITPDI 84
N + + F L R P G T++V + K + L ++ G P+
Sbjct: 338 NYANALGFFYWLKRQ---PGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNT 394
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
VT N LI+ Y + A +V ++ + G +P+ +T+ TLI G + A+ +
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
+ G + +Y +IN L K G A+ +L ++ G+ P++V +N +I K
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSL--IYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
A LY +M P VT++ + + G C G L+EA + EM KN PD Y
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
+LVD + K G V +A M++ G++PNV T SL+ + V +++A +L SM
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 323 RGVTPNVQSYNTMIN 337
G+ P++Q+Y +++
Sbjct: 633 LGLHPSLQTYTLLLS 647
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 146/309 (47%), Gaps = 15/309 (4%)
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF + +Y T++ L + Q +LL ++ KP+ V YN +I S + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
N++++M P VT+ +LI G L A+ + M ++PD +TY+++++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
K G + A + M+ QG PN+VT+ ++ + A + M G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+Y+ ++ L ++EA +FAEM KN VP+ Y L+D
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP---------------VYGLLVDL 578
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
K+ +VDKA + + G++P+V T N L+ R+ A ++Q +L G +
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Query: 449 VRTYTIMIN 457
++TYT++++
Sbjct: 639 LQTYTLLLS 647
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 149/314 (47%), Gaps = 1/314 (0%)
Query: 59 LVKMKHYSTAISLSHQLEF-TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQP 117
L +M +Y+ A+ + L+ G D T ++ Q +L ++++ G +P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
NT+T+ LI ++ A+ + + G ++++Y TLI+ K G ++ +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
++++ + PD Y+ II+ L K + A L+ EMV P++VTFN +I
Sbjct: 453 QRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKA 512
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
+ A+ L +M PD TY+I+++ G ++EA V A M ++ P+ Y
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
L+D + V+KA +M Q G+ PNV + N++++ ++ + EA NL M
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 358 KNIVPNTVTFNSLI 371
+ P+ T+ L+
Sbjct: 633 LGLHPSLQTYTLLL 646
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 114/230 (49%), Gaps = 15/230 (6%)
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
+ G K + TYT+++ + + +L+ M + G PN +YN +I+ + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR 406
EA+N+F N + + C+ + +TY +L+D K+ +D A+ + ++++
Sbjct: 412 EAMNVF---------------NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 407 DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFD 466
+ G+ PD TY+++++ L + G L A + +++ +G + T+ IMI K ++
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYE 516
Query: 467 EALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
AL L M++ G PD +T+ ++ L G +AE + EM + +
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 154/316 (48%), Gaps = 7/316 (2%)
Query: 63 KHYSTAISLSHQLEFTG--ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTI 120
K + SL +++ G IT D T I+I Y A ++ G P++
Sbjct: 692 KDFKQMRSLFYEMRRQGCLITQD--TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSS 749
Query: 121 TFTTLIKGLCLNG--QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
TF LI LC V+ A + ++ GF ++ + LC++G T+ + L
Sbjct: 750 TFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLD 809
Query: 179 KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
+ GK+ P V Y+ I +LC+ + +A + + R L T+ S+++G G
Sbjct: 810 SL-GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
L++A+ ++ M P V+ Y L+ F KE ++++ M + +P+VVTYT
Sbjct: 869 DLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYT 928
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+++ GY + +V +A +M +RG +P+ ++Y+ IN LC+ ++AL L +EM K
Sbjct: 929 AMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDK 988
Query: 359 NIVPNTVTFNSLIDGL 374
I P+T+ F ++ GL
Sbjct: 989 GIAPSTINFRTVFYGL 1004
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 197/436 (45%), Gaps = 22/436 (5%)
Query: 31 DDV-VSIFNRLLRMSP--TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
DDV VS+ +RL ++S P I+E +L K+ H + + + G + +
Sbjct: 136 DDVLVSMEDRLEKLSFRFEPEIVE--NVLKRCFKVPHLAMRF-FNWVKQKDGFSHRVGIY 192
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N +++ + +++++ K G + T+T LI ++ L + +
Sbjct: 193 NTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRK 252
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
GF L+ +Y +I LC G+ +L+ +++ K + + Y ++D + K V
Sbjct: 253 SGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDV 312
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
++ +MV + + F L+ FC+ G++KEA+ L+ E+ K + D + ILV
Sbjct: 313 VQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVK 372
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C+ ++ +A ++ +M ++ + + V Y ++ GY ++V+KA + + G P
Sbjct: 373 GLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPP 431
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
V +Y ++ L K+K ++ NLF EM I P++V +++ G N
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN--------- 482
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
V +A + + ++GI+P ++Y+I + LC R ++ + +
Sbjct: 483 ------RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVI 536
Query: 448 TVRTYTIMINGLCKEG 463
++ +I+ + K G
Sbjct: 537 RDDIFSWVISSMEKNG 552
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 209/478 (43%), Gaps = 41/478 (8%)
Query: 40 LLRMSPTPPIIE-FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
+++ S PP + + +I+ L K+K + +L +++ GI PD V + ++ + Q
Sbjct: 423 VIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQN 482
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
++ A+ V + + +KG +P +++ +K LC + + ++ + + A + +
Sbjct: 483 RVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFS 542
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL--------CKDTLVTDAFN 210
+I+ + K G+ + + L+++I+ + N+ D L ++ + D +N
Sbjct: 543 WVISSMEKNGE-KEKIHLIKEIQKR--------SNSYCDELNGSGKAEFSQEEELVDDYN 593
Query: 211 LYSEMVAMRILPSVVTFNSL-IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ + P++ + + + C V E + K+ +T ++V+
Sbjct: 594 CPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQ--FTPELVVEVL 651
Query: 270 CKEGKVKEATNVL----AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ K+ + VL V + G K N Y + + + + + M ++G
Sbjct: 652 -RHAKI-QGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGC 709
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
++ MI + + + A+ F EM ++P++ TF LI LC+
Sbjct: 710 LITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEK-------- 761
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
K +V++A +++ G PD + LCE G K+A+ + L G+
Sbjct: 762 -----KGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF 816
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
PVTV Y+I I LC+ G +EAL+ L+ E + D T+ +I+ L ++G+ KA
Sbjct: 817 PVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKA 873
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 23/313 (7%)
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+L+ EM L + T+ +I + G AI EM + P T+ L+
Sbjct: 699 SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 270 C-KEGK-VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
C K+G+ V+EAT M++ G P+ + C V AK L+S+ + G P
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-P 817
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL------------- 374
+Y+ I LC+I ++EAL+ A + + + + T+ S++ GL
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 375 -------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
K + Y SL+ K ++K + +K+ + +P V TY ++ G
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
G+++ A +++ +G +TY+ IN LC+ ++AL LLS+M D G P I F
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 488 ETIIRALFEKGEN 500
T+ L +G++
Sbjct: 998 RTVFYGLNREGKH 1010
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 157/351 (44%), Gaps = 1/351 (0%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
N+D V + + + + I + +++ K K + + ++ +G D
Sbjct: 203 RNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAY 262
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
NI+I C + A ++++KG T+ L+ + + +V D +V
Sbjct: 263 NIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
++G L+ C G+ + +L+L+R+++ K + D + ++ LC+ + D
Sbjct: 323 ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A + +++ R L + +I G+ + +A+ + + P V TY ++
Sbjct: 383 ALEIV-DIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQ 441
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K + ++ N+ M++ G++P+ V T+++ G+ + V +A + +SM ++G+ P
Sbjct: 442 HLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
+SY+ + LC+ DE + +F +M IV F+ +I + K+
Sbjct: 502 TWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG 552
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 188/455 (41%), Gaps = 69/455 (15%)
Query: 31 DDVVSIFN--RLLRMSPTPPII---------EFGKILTSLVKMKHYSTAISLSHQLEFTG 79
+++V +N +L++ S PP + E ++L+S + A+ S ++FT
Sbjct: 586 EELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKS-TVQFT- 643
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
P++V + +L + + FS + K + GY+ N+ + IK +
Sbjct: 644 --PELV-VEVLRHAKIQGNAVLRFFSWVGK--RNGYKHNSEAYNMSIKVAGCGKDFKQMR 698
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ QG + Q ++ +I + G T +++ ++++ + P + +I L
Sbjct: 699 SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 200 C--KDTLVTDAFNLYSEMVAMRILPS---------------------------------- 223
C K V +A + EM+ +P
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV 818
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
V ++ I C +G+L+EA++ L + D YTY +V + G +++A + +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 284 VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
M + G KP V YTSL+ + ++ K M P+V +Y MI G +
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIK 403
V+EA N F M+ + P+ T++ I+ LC++ CKS + A+ L+
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQA------------CKS---EDALKLLS 983
Query: 404 KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
++ D+GI P + + GL EG+ A+ +Q
Sbjct: 984 EMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQ 1018
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 152/359 (42%), Gaps = 22/359 (6%)
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+L+ ++E D+ + +I K + ++ +M +N +I
Sbjct: 210 ELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSL 269
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
CI G+ A+ EM+ K I + TY +L+D K KV ++ M++
Sbjct: 270 CIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEH 329
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+ L+ +C+ ++ +A ++ + + + + + + ++ GLC+ + +AL +
Sbjct: 330 DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDI 389
Query: 355 MDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDALCKSHH 394
M + + + V + +I G + N + TY ++ L K
Sbjct: 390 MKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQ 448
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTI 454
+K L ++ + GI+PD ++ G + R+ A +V + KG T ++Y+I
Sbjct: 449 FEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSI 508
Query: 455 MINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
+ LC+ +DE + + ++M + + F +I ++ + GE K L++E+ R
Sbjct: 509 FVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIH-LIKEIQKR 566
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 18/328 (5%)
Query: 189 VVMYNTIIDSLCKDTLVTDAFN-LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
V +YNT++ S+ + D + L SEM + T+ LI + ++ + + +
Sbjct: 189 VGIYNTML-SIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVF 247
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
++M D YNI++ + C G+ A MM++G+ + TY L+D
Sbjct: 248 EKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKS 307
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+V+ + I + M + ++ ++ C + EAL L E+ K + + F
Sbjct: 308 EKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYF 367
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
L+ GLC++N ++DAL VD I +K+ D + Y I++ G +
Sbjct: 368 EILVKGLCRAN-----RMVDAL---EIVD--IMKRRKLDDSNV------YGIIISGYLRQ 411
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
+ A E + + G P V TYT ++ L K F++ L ++M +NG PD++
Sbjct: 412 NDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAI 471
Query: 488 ETIIRALFEKGENYKAEKLLREMMARGL 515
++ + +A K+ M +G+
Sbjct: 472 TAVVAGHLGQNRVAEAWKVFSSMEEKGI 499
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 1/208 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+ N D S + L ++ P + + + +L ++ A+S E D T
Sbjct: 798 VGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYT 856
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
+++ + + A + + + G +P +T+LI Q++ L+ +
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+ + ++Y +I G +G+ + R +E + PD Y+ I+ LC+
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE 976
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGF 234
DA L SEM+ I PS + F ++ YG
Sbjct: 977 DALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 44 SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA 103
S P ++ + ++ + + A + +E G +PD T + INC C + A
Sbjct: 919 SCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDA 978
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQ---VQTALQFHDHVVAQ 148
+L+++L KG P+TI F T+ GL G+ + ALQ +VAQ
Sbjct: 979 LKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVAQ 1026
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+G I+ L++ A+ + ++ G P + LI + + Q+ K+
Sbjct: 857 YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKME 916
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+ +P+ +T+T +I G G+V+ A ++ +G + +Y IN LC+ ++
Sbjct: 917 GESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSE 976
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSL---CKDTLVTDAFNLYSEMVAMR 219
+L+LL ++ K + P + + T+ L K L A S +VA R
Sbjct: 977 DALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVAQR 1027
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 157/318 (49%), Gaps = 11/318 (3%)
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ---GFHLNQISYGTLINGLCK 166
+L K + P++ +TTL+KG NG+V + + + Q H ++++Y T+++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA-MRILPSVV 225
G + Q+L ++ V + + YN ++ CK + A +L EM I P VV
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
++N +I G ++ A+A +EM T+ I P +Y L+ AF G+ K A V M
Sbjct: 525 SYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 286 MKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M VK +++ + L++GYC + + A+ +++ M + G PNV +Y ++ NG+ + +
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Query: 345 VDEALNLFAEMD--C---KNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAI 399
+AL L+ E+ C K P+ + + + K + ++L D ++ KA+
Sbjct: 645 PGDALLLWKEIKERCAVKKKEAPSDSSSDP-APPMLKPDEGLLDTLADICVRAAFFKKAL 703
Query: 400 ALIKKIRDQGIQPDVRTY 417
+I + + GI P+ Y
Sbjct: 704 EIIACMEENGIPPNKTKY 721
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 206/496 (41%), Gaps = 92/496 (18%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
PD N ++N + + + ++ + +P+ +T+ +IK G+ + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRAS---LQLLRKIEGKLVK------------ 186
+ ++ +G + + +L+ G R + +Q +R+ L K
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 187 -----------------------PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
D V ++D K L+ ++ + E +LP
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKK--LLPNSVDPSGEPP---LLPK 408
Query: 224 VVTFNSLIY-----GFCIVGQLKEAIALLDEMVT---KNINPDVYTYNILVDAFCKEGKV 275
V +S IY G+ G++ + +L+ M +N +PD TY +V AF G +
Sbjct: 409 VFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM 468
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ-RGVTPNVQSYNT 334
A VLA M + GV N +TY L+ GYC ++++A+ +L M + G+ P+V SYN
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNI 528
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI---------------------DG 373
+I+G I AL F EM + I P +++ +L+ D
Sbjct: 529 IIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDP 588
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
K ++I +N L++ C+ ++ A ++ ++++ G P+V TY L +G+ + + +A
Sbjct: 589 RVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDA 648
Query: 434 ---------------QEVIQDLLTKGYPVTVRTYTIMINGLC----KEGLFDEALTLLSK 474
+E D + P ++ +++ L + F +AL +++
Sbjct: 649 LLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIAC 708
Query: 475 MEDNGCMPDAITFETI 490
ME+NG P+ ++ I
Sbjct: 709 MEENGIPPNKTKYKKI 724
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK---PNVVTYTSLMDGYCL 306
++ K PD Y L+ + K G+V + +L M +Q + P+ VTYT+++ +
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTV 365
+++A+ +L M + GV N +YN ++ G CK +D A +L EM + I P+ V
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVV 524
Query: 366 TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC 425
++N +IDG L+D A+A ++R +GI P +Y LM
Sbjct: 525 SYNIIIDGCI---------LIDDSAG------ALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 426 EEGRLKNAQEVIQDLLTKGY-PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
G+ K A V +++ V + + +++ G C+ GL ++A ++S+M++NG P+
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMAR 513
T+ ++ + + + A L +E+ R
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 21/275 (7%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + ++++ V A + ++ G+ + +T N+L+ YC Q QI A +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 107 LAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
L ++ + G +P+ +++ +I G L AL F + + +G +ISY TL+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 166 KMGQTRASLQLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
GQ + + ++ + + VK D++ +N +++ C+ L+ DA + S M P+V
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEM-----VTKN--------------INPDVYTYNIL 265
T+ SL G + +A+ L E+ V K + PD + L
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
D + K+A ++A M + G+ PN Y +
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKYKKI 724
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/460 (20%), Positives = 184/460 (40%), Gaps = 55/460 (11%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA-----QGFHLNQISYGTL 160
AK ++ + P + L+ L + ++ + + Q L+ S G L
Sbjct: 100 AWAKYVQSTHLPGPTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQLHRLDANSLGLL 159
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK--DTLVTDAFNLY------ 212
K GQT ++ +++ + P V + + SL D ++ L+
Sbjct: 160 AMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKLFIAITRR 219
Query: 213 -----SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ + + P FN+++ +G + L +EM + PDV TYN+++
Sbjct: 220 VKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIK 279
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM--PQRGV 325
+ G+ + VL ++ +G+K + T SL+ Y ++ A+ I+ +M +R +
Sbjct: 280 LCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDL 339
Query: 326 TPNVQSYNTMI---------------------NGLCKIKMVDEA--LNLFAEMDCKNIVP 362
++ N +G V E +++F K ++P
Sbjct: 340 CKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVF-----KKLLP 394
Query: 363 NTVTFNS---LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR---DQGIQPDVRT 416
N+V + L+ + + Y +L+ K+ V +++ +R D+ PD T
Sbjct: 395 NSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVT 454
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM- 475
Y ++ G + A++V+ ++ G P TY +++ G CK+ D A LL +M
Sbjct: 455 YTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT 514
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
ED G PD +++ II ++ A EM RG+
Sbjct: 515 EDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI 554
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 188/417 (45%), Gaps = 30/417 (7%)
Query: 102 SAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLI 161
S+ LA +LK +++ ++G+ Q +Q + + G +IS T
Sbjct: 87 SSLQRLATVLK------VQDLNVILRDFGISGRWQDLIQLFEWMQQHG----KISVSTYS 136
Query: 162 NGLCKMGQTRAS--LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMR 219
+ + +G S L++ + I + K +V + N+I+ L K+ + L+ +M
Sbjct: 137 SCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDG 196
Query: 220 ILPSVVTFNSLIYGFCIVGQ--LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
+ P VVT+N+L+ G CI + +AI L+ E+ I D Y ++ G+ +E
Sbjct: 197 LKPDVVTYNTLLAG-CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEE 255
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
A N + M +G PN+ Y+SL++ Y + KA ++ M G+ PN T++
Sbjct: 256 AENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
K + D + L +E++ N + + L+DGL K+ +++
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG---------------KLEE 360
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A ++ ++ +G++ D +I++ LC R K A+E+ +D T + M+
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLC 420
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
C+ G + + ++ KM++ PD TF +I+ ++ + A + +M ++G
Sbjct: 421 AYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 164/348 (47%), Gaps = 18/348 (5%)
Query: 100 ITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
++ A + I + + N +++ L NG++ + ++ D + G + ++Y T
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 160 LINGLCKM--GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA 217
L+ G K+ G +A ++L+ ++ ++ D VMY T++ + +A N +M
Sbjct: 207 LLAGCIKVKNGYPKA-IELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
P++ ++SL+ + G K+A L+ EM + + P+ L+ + K G
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
+ +L+ + G N + Y LMDG ++ +A+ I + M +GV + + + MI+
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
LC+ K EA L + + T+ K +++ N++L A C++ ++
Sbjct: 386 ALCRSKRFKEAKELSRDSE--------TTYE-------KCDLVMLNTMLCAYCRAGEMES 430
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ ++KK+ +Q + PD T++IL+ +E A + D+ +KG+
Sbjct: 431 VMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGH 478
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 147/317 (46%), Gaps = 1/317 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
NV + I+ + S + IL+ LVK + I L Q++ G+ PD+VT N
Sbjct: 146 NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN 205
Query: 89 ILI-NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
L+ C + A ++ ++ G Q +++ + T++ NG+ + A F +
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G N Y +L+N G + + +L+ +++ + P+ VM T++ K L
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ L SE+ + + + + L+ G G+L+EA ++ D+M K + D Y +I++
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
A C+ + KEA + K ++V +++ YC E+ ++ M ++ V+P
Sbjct: 386 ALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSP 445
Query: 328 NVQSYNTMINGLCKIKM 344
+ +++ +I K K+
Sbjct: 446 DYNTFHILIKYFIKEKL 462
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 192/427 (44%), Gaps = 24/427 (5%)
Query: 51 EFGKILTS-------LVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA 103
+ GKI S V K+ S A+ + + ++ N +++C ++ S
Sbjct: 126 QHGKISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSC 185
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCL---NGQVQTALQFHDHVVAQGFHLNQISYGTL 160
+ ++ + G +P+ +T+ TL+ G C+ NG + A++ + G ++ + YGT+
Sbjct: 186 IKLFDQMKRDGLKPDVVTYNTLLAG-CIKVKNGYPK-AIELIGELPHNGIQMDSVMYGTV 243
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
+ G++ + +++++ + P++ Y+++++S A L +EM ++ +
Sbjct: 244 LAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGL 303
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
+P+ V +L+ + G + LL E+ + + Y +L+D K GK++EA +
Sbjct: 304 VPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARS 363
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
+ M +GV+ + + ++ C +AK + ++ NTM+ C
Sbjct: 364 IFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYC 423
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--NIITYNSLLDALCKSHHVDKA 398
+ ++ + + +MD + + P+ TF+ LI K +++ Y + LD K H +++
Sbjct: 424 RAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEE 483
Query: 399 -----IALIKKIRDQGIQPDVRTYNILM---DGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
I + KIR Q V YN+L +C+E K +IQ L K + V+
Sbjct: 484 LCSSLIYHLGKIRAQAEAFSV--YNMLRYSKRTICKELHEKILHILIQGNLLKDAYIVVK 541
Query: 451 TYTIMIN 457
MI+
Sbjct: 542 DNAKMIS 548
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 16/255 (6%)
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N+++ F G+ ++ + M + G K +V TY+S + + V+KA I S+P
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCIK-FVGAKNVSKALEIYQSIPD 159
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
NV N++++ L K +D + LF +M + P+ VT+N+L+ G K
Sbjct: 160 ESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVK---- 215
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ KAI LI ++ GIQ D Y ++ GR + A+ IQ +
Sbjct: 216 ----------NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
+G+ + Y+ ++N +G + +A L+++M+ G +P+ + T+++ + G +
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 503 AEKLLREMMARGLLE 517
+ +LL E+ + G E
Sbjct: 326 SRELLSELESAGYAE 340
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 153/322 (47%), Gaps = 19/322 (5%)
Query: 153 NQISYGTLINGLCKM---GQTRASLQLLRKIEGKLVKPD--VVMYNTIIDSLCKDTLVTD 207
N +S+ ++ LCK+ G +L+ K+E ++ + V +N ++ + C + + +
Sbjct: 135 NLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKE 194
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A +++ E + R P V T N L+ GF G + EMV + P+ TY I +D
Sbjct: 195 ARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRID 253
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
FCK+ EA + M + V T+L+ G + KA+ + + + +RG+TP
Sbjct: 254 GFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTP 313
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
+ +YN +++ L K V A+ + EM+ K I P++VTF+S+ G+ KS +N
Sbjct: 314 DCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFN---- 369
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+C+ + +K++++ + P T +LM C G + ++ + +L KGY
Sbjct: 370 GVCEYY---------QKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
Query: 448 TVRTYTIMINGLCKEGLFDEAL 469
++ LC ++A
Sbjct: 421 HGHALELLTTALCARRRANDAF 442
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 51 EFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKI 110
EF +L + + A S+ +L + PD+ T+NIL+ + +T+ ++
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLH-SRFNPDVKTMNILLLGFKEAGDVTATELFYHEM 236
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
+K+G++PN++T+ I G C AL+ + + F + TLI+G
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ QL +I + + PD YN ++ SL K V+ A + EM I P VTF+S+
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 231 IYGFCIVGQ--LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
G + +M +++ P T +L+ FC G+V ++ M+++
Sbjct: 357 FIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKA 313
G P+ L C N A
Sbjct: 417 GYCPHGHALELLTTALCARRRANDA 441
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 52/231 (22%)
Query: 323 RGVTPNVQSYNTMINGLCKIKMV---DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
R PN+ S+ +M LCKI +E L F +M+ K I K +
Sbjct: 130 RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKME-KEIFRK------------KFGV 176
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
+N LL A C + +A ++ +K+ + PDV+T NIL+ G E G + + +
Sbjct: 177 DEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHE 235
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME----------------------- 476
++ +G+ TY I I+G CK+ F EAL L M+
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 477 ------------DNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G PD + ++ +L + G+ A K+++EM +G+
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 165/393 (41%), Gaps = 22/393 (5%)
Query: 136 QTALQFHDHVVAQ-GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
+ + F D V + G + SY ++ L + + +L+ + + V PD+
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTI 191
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
+DS + V A L+ E + + S +FN+L+ C + A ++ + N
Sbjct: 192 AMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK-KGN 250
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
I D +YNI++ + K G+V+E VL M++ G P+ ++Y+ L++G +N +
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
I +++ +G P+ YN MI + DE++ + M + PN T++ L+ GL
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 375 CKSNIIT--------------------YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
K ++ S L LC A+ + +K R G +
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 415 RTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSK 474
Y +L+ L G+ V ++ GYP V Y +++GLC G + A+ ++ +
Sbjct: 431 SAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Query: 475 MEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
G P+ + + L + A KL
Sbjct: 491 AMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 9/327 (2%)
Query: 56 LTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGY 115
+ S V++ + AI L + E G+ + N L+ C C ++ +++A SV KKG
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGN 250
Query: 116 QP-NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
P ++ ++ +I G G+V+ + +V GF + +SY LI GL + G+ S+
Sbjct: 251 IPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
++ I+ K PD +YN +I + ++ Y M+ P++ T++ L+ G
Sbjct: 311 EIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGL 370
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNV 294
++ +A+ + +EM+++ + P + C G A + K G + +
Sbjct: 371 IKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISE 430
Query: 295 VTYTSLMDGYCLVSEVNKAKYILN---SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
Y L+ +S K +LN M + G +V+ Y +++GLC I ++ A+ +
Sbjct: 431 SAYKLLLK---RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLV 487
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSN 378
E K PN ++ L L SN
Sbjct: 488 MEEAMRKGFCPNRFVYSRLSSKLMASN 514
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 160/347 (46%), Gaps = 21/347 (6%)
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
++ ++ R +++L + E VK +N ++ LC+ + V+ A ++++ I
Sbjct: 193 MDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NI 251
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
++N +I G+ +G+++E +L EMV PD +Y+ L++ + G++ ++
Sbjct: 252 PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE 311
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
+ + +G P+ Y +++ + + +++ M PN+++Y+ +++GL
Sbjct: 312 IFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI 371
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK-----SNIITYNSLLDALCKSHHV 395
K + V +AL +F EM + ++P T S + LC + ++ Y A C+
Sbjct: 372 KGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISES 431
Query: 396 DKAIALIK---------------KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+ L + ++++ G DV Y ++DGLC G L+NA V+++
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 441 LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITF 487
+ KG+ Y+ + + L + A L K++ +A +F
Sbjct: 492 MRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 147/341 (43%), Gaps = 1/341 (0%)
Query: 27 IHNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVT 86
+H V + +F F +L L + H S A S+ + + I D +
Sbjct: 199 VHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK-GNIPFDSCS 257
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
NI+I+ + ++ VL ++++ G+ P+ ++++ LI+GL G++ +++ D++
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIK 317
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+G + Y +I S++ R++ + +P++ Y+ ++ L K V+
Sbjct: 318 HKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVS 377
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
DA ++ EM++ +LP+ S + C G A+ + + Y +L+
Sbjct: 378 DALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL 437
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
+ GK NV M + G +V Y ++DG C++ + A ++ ++G
Sbjct: 438 KRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
PN Y+ + + L + A LF ++ N +F
Sbjct: 498 PNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 17/274 (6%)
Query: 244 IALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
+ D V + + DV +Y++++ A + +VL M+ +GV P++ T MD
Sbjct: 135 VTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
+ V V +A + GV + +S+N ++ LC+ V A ++F N
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF------NAKK 248
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
+ F+S +YN ++ K V++ ++K++ + G PD +Y+ L++
Sbjct: 249 GNIPFDS----------CSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
GL GR+ ++ E+ ++ KG Y MI FDE++ +M D C P
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ T+ ++ L + + A ++ EM++RG+L
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL 392
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 198/437 (45%), Gaps = 23/437 (5%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D++ L +++N + + ++L + K + + +I G V A
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVISSFVREGDVSKAEMIA 658
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
D ++ G + + + TLI + + + + +L G+ P + ++ID+ +
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAA-GESKTPGKSVIRSMIDAYVRC 717
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ DA+ L+ E P VT + L+ G+ +EA + + KNI D Y
Sbjct: 718 GWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGY 777
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N L+ A + GK++ A+ + M GV ++ TY +++ Y +++KA I ++ +
Sbjct: 778 NTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARR 837
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
G+ + + Y MI K + EAL+LF+EM K I P T ++N ++ +C ++ +
Sbjct: 838 SGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRL-- 894
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
H VD+ L++ + G D+ TY L+ E + A++ I +
Sbjct: 895 ---------HHEVDE---LLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK 502
KG P++ ++ +++ L K G+ +EA KM + G PD+ TI++ G+
Sbjct: 943 KGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGD--- 999
Query: 503 AEK--LLREMMARGLLE 517
AEK L E M R +E
Sbjct: 1000 AEKGILFYEKMIRSSVE 1016
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 136/294 (46%), Gaps = 2/294 (0%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP + +I+ Y + A+ + + +KG P +T + L+ L G+ + A
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH 760
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
+ + L+ + Y TLI + + G+ + + ++ ++ V + YNT+I
Sbjct: 761 ISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYG 820
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ + A ++S + + ++I + G++ EA++L EM K I P
Sbjct: 821 RGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTP 880
Query: 261 TYNILVDAFCKEGKV-KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
+YN++V C ++ E +L M + G ++ TY +L+ Y S+ +A+ +
Sbjct: 881 SYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITL 939
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ ++G+ + ++++++ L K M++EA + +M I P++ +++ G
Sbjct: 940 VKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKG 993
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/442 (19%), Positives = 189/442 (42%), Gaps = 27/442 (6%)
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
Q+ FS + L+ Y+P+ + +T +++ G+++ A + ++ G + ++ G
Sbjct: 170 QVRDFFSWMK--LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
T++ + G+ A L + ++ + + +YN ++ SL K + +L+ EMV
Sbjct: 228 TMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE 287
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
+ P+ T+ ++ + G +EA+ EM + P+ TY+ ++ K G ++A
Sbjct: 288 GVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKA 347
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+ M QG+ P+ T +++ Y KA + M + + + +I
Sbjct: 348 IGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRI 407
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID-GLCKSNII----------------- 380
K+ + +A ++F E + N++ + T+ ++ L N++
Sbjct: 408 YGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLS 467
Query: 381 --TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
Y +L K +VD A + + G+ PD + N +++ + A+ I+
Sbjct: 468 RFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIK 526
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKG 498
++ + Y + CKEG+ EA L+ KM + D +T+ ++
Sbjct: 527 QIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVN 586
Query: 499 ENYKAEKLLR----EMMARGLL 516
++ K E +L ++MA GL+
Sbjct: 587 KHDKHEAVLNVSQLDVMALGLM 608
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 150/335 (44%), Gaps = 3/335 (0%)
Query: 44 SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA 103
S TP ++ + V+ A L + G P VT++IL+N ++ + A
Sbjct: 699 SKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA 758
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
+ L+K + +T+ + TLIK + G++Q A + ++ + G + +Y T+I+
Sbjct: 759 EHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISV 818
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
+ Q ++++ + D +Y +I K +++A +L+SEM I P
Sbjct: 819 YGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG 878
Query: 224 VVTFNSLIYGFCIVGQLKEAI-ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
++N ++ C +L + LL M D+ TY L+ + + + EA +
Sbjct: 879 TPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
++ ++G+ + ++SL+ + +A+ M + G++P+ T++ G
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTC 997
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
++ + LF E ++ V + +S+++ L K+
Sbjct: 998 GDAEKGI-LFYEKMIRSSVEDDRFVSSVVEDLYKA 1031
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/468 (19%), Positives = 192/468 (41%), Gaps = 23/468 (4%)
Query: 37 FNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCH 96
F +L + P + G +L + + +S ++ ++ I N +++
Sbjct: 211 FLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQK 270
Query: 97 QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQIS 156
++ + +++++G PN T+T ++ G + AL+ + + GF +++
Sbjct: 271 KSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVT 330
Query: 157 YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
Y ++I+ K G ++ L + + + P T++ K A +L+++M
Sbjct: 331 YSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADME 390
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
+I V +I + +G +A ++ +E N+ D TY + G V
Sbjct: 391 RNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVV 450
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+A +V+ +M + + + Y ++ Y + V+ A+ ++ + G+ P+ S N M+
Sbjct: 451 KALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDML 509
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
N ++ + ++A K I+ + V F +I Y + + CK V
Sbjct: 510 NLYTRLNLGEKAKGFI-----KQIMVDQVHF----------DIELYKTAMRVYCKEGMVA 554
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
+A LI K+ + D N + L E + N + + +L + V +M+
Sbjct: 555 EAQDLIVKMGREARVKD----NRFVQTLAESMHIVNKHDKHEAVLNVS-QLDVMALGLML 609
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
N KEG +E +L+ M A+ +I + +G+ KAE
Sbjct: 610 NLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVISSFVREGDVSKAE 655
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 200/421 (47%), Gaps = 37/421 (8%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G D N +I + H A +L +L+ G + + + ++K G V+
Sbjct: 81 GEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 140
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+Q H + G + LI K G L L R++ ++ K D V YN++ID
Sbjct: 141 MQIHGFLKKTGLWSDLFLQNCLIGLYLKCG----CLGLSRQMFDRMPKRDSVSYNSMIDG 196
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
K L+ A L+ +++ M + +++++NS+I G+ Q + + + ++ D
Sbjct: 197 YVKCGLIVSARELF-DLMPME-MKNLISWNSMISGY---AQTSDGVDIASKLFADMPEKD 251
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+ ++N ++D + K G++++A + VM ++ +VVT+ +++DGY + V+ AK + +
Sbjct: 252 LISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGLCKS 377
MP R +V +YN+M+ G + K EAL +F++M+ + +++P+ T
Sbjct: 308 QMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL---------- 353
Query: 378 NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
+I +L A+ + + KAI + I ++ + L+D + G +++A V
Sbjct: 354 -VI----VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVF 408
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEK 497
+ + K ++ + MI GL GL + A +L ++E PD ITF ++ A
Sbjct: 409 EGIENK----SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHS 464
Query: 498 G 498
G
Sbjct: 465 G 465
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 173/392 (44%), Gaps = 46/392 (11%)
Query: 69 ISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA---FSVLAKILKKGYQPNTITFTTL 125
+ LS Q+ D V+ N +I+ Y I SA F ++ +K N I++ ++
Sbjct: 172 LGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK-----NLISWNSM 226
Query: 126 IKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLV 185
I G Q + + A + IS+ ++I+G K G+ + L +
Sbjct: 227 ISGY---AQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP---- 279
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA 245
+ DVV + T+ID K V A L+ +M VV +NS++ G+ EA+
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMAGYVQNKYHMEALE 335
Query: 246 LLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNV-LAVMMKQ---GVKPNVVTYTSL 300
+ +M + ++ PD T I++ A + G++ +A ++ L ++ KQ G K V +L
Sbjct: 336 IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV----AL 391
Query: 301 MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+D Y + A + + + ++ +N MI GL + + A ++ +++ ++
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENK----SIDHWNAMIGGLAIHGLGESAFDMLLQIERLSL 447
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
P+ +TF +++ S ++ L L + R I+P ++ Y +
Sbjct: 448 KPDDITFVGVLNACSHSGLVKEGLLCFELMR--------------RKHKIEPRLQHYGCM 493
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+D L G ++ A+ +I+++ + V RT+
Sbjct: 494 VDILSRSGSIELAKNLIEEMPVEPNDVIWRTF 525
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 161/330 (48%), Gaps = 21/330 (6%)
Query: 161 INGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI 220
+ LC + QT S +++ D +N ++ +LC++ +TDA N+Y + +
Sbjct: 154 VAKLCSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSL-KHQF 210
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
P + TFN L+ G+ +EA A +EM K + PDV TYN L+D +CK+ ++++A
Sbjct: 211 QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYK 267
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
++ M ++ P+V+TYT+++ G L+ + +KA+ +L M + G P+V +YN I C
Sbjct: 268 LIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFC 327
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIA 400
+ + +A L EM K + PN T YN L ++ + ++
Sbjct: 328 IARRLGDADKLVDEMVKKGLSPNATT---------------YNLFFRVLSLANDLGRSWE 372
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
L ++ P+ ++ L+ ++ A + +D++ KG+ ++++ LC
Sbjct: 373 LYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLC 432
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETI 490
+EA L +M + G P ++F+ I
Sbjct: 433 DLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 6/266 (2%)
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
C Q +F +++ + +T F L++ LC + A + H + F +
Sbjct: 158 CSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVY-HSLKHQFQPDL 214
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
++ L++G + A + ++ GK +KPDVV YN++ID CKD + A+ L +
Sbjct: 215 QTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M P V+T+ ++I G ++GQ +A +L EM PDV YN + FC +
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
+ +A ++ M+K+G+ PN TY L +++ ++ + M PN QS
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNI 360
+I + + VD A+ L+ +M K
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGF 417
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 235 CIVGQLKEAIALLDEMVTKNINPDVYT---YNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
C V Q E+ +V PD + +N L+ C+E + +A NV + K +
Sbjct: 158 CSVRQTVESFWKFKRLV-----PDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQ 211
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P++ T+ L+ G+ +A+ M +G+ P+V +YN++I+ CK + +++A L
Sbjct: 212 PDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKL 268
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
+M + P+ +T+ ++I GL +I DKA ++K++++ G
Sbjct: 269 IDKMREEEETPDVITYTTVIGGL---GLIG------------QPDKAREVLKEMKEYGCY 313
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
PDV YN + C RL +A +++ +++ KG TY + L + L
Sbjct: 314 PDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWEL 373
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYK-AEKLLREMMARGL 515
+M N C+P+ + +I+ +F++ E A +L +M+ +G
Sbjct: 374 YVRMLGNECLPNTQSCMFLIK-MFKRHEKVDMAMRLWEDMVVKGF 417
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 149/320 (46%), Gaps = 13/320 (4%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
F +L +L + K + A ++ H L+ PD+ T NIL++ + + + F +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEEMKG-- 239
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
KG +P+ +T+ +LI C + +++ A + D + + + I+Y T+I GL +GQ
Sbjct: 240 -KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+ ++L++++ PDV YN I + C + DA L EMV + P+ T+N
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ L + L M+ P+ + L+ F + KV A + M+ +G
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFG 418
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
+ L+D C +++V +A+ L M ++G P+ S+ +IK++ E N
Sbjct: 419 SYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFK-------RIKLLMELANK 471
Query: 352 FAEMDCKNIVPNTVTFNSLI 371
E++ N++ F++ I
Sbjct: 472 HDEVN--NLIQKMAIFSTEI 489
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEF-GKILTSLVKMKHYSTAISLSHQL--EFTGITPDIV 85
N+ D S+FN + S P ++F +L S + + + L + P
Sbjct: 64 NLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS 123
Query: 86 TLNILIN--CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
T IL++ C + I++ VL ++ G +P+ +T ++ LC G+V A
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKD 202
+ + + +Y L+ LCK + + ++ VKPD+V + +ID++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ +A L S++ P +N+++ GFC + + EA+ + +M + + PD TY
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
N L+ K G+V+EA L M+ G +P+ TYTSLM+G C
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 21/304 (6%)
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTF-NSLIYGFCIVGQLKEAIALLDEMVTK--NINP 257
K ++DA +L++ + A +P + F NS++ + + + + + L ++ N P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 258 DVYTYNILVDAFCK--EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
T+ IL+ C+ + + VL +M+ G++P+ VT + C V++AK
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGL 374
++ + ++ P+ +YN ++ LCK K + EM D ++ P+ V+F LID +
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
C S ++ +A+ L+ K+ + G +PD YN +M G C + A
Sbjct: 241 CNSK---------------NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
V + + +G TY +I GL K G +EA L M D G PD T+ +++ +
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 495 FEKG 498
KG
Sbjct: 346 CRKG 349
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 15/254 (5%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHY----STAISLSHQ----LEFTGIT 81
V+D V +F +L+ P G+ T L+ + H ++IS H+ + G+
Sbjct: 101 VNDTVKLFQHILKSQPN---FRPGRS-TFLILLSHACRAPDSSISNVHRVLNLMVNNGLE 156
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
PD VT +I + C ++ A ++ ++ +K P+T T+ L+K LC + +F
Sbjct: 157 PDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEF 216
Query: 142 HDHVVAQGFHLNQ--ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
D + F + +S+ LI+ +C R ++ L+ K+ KPD +YNTI+
Sbjct: 217 VDEM-RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGF 275
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
C + ++A +Y +M + P +T+N+LI+G G+++EA L MV PD
Sbjct: 276 CTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 260 YTYNILVDAFCKEG 273
TY L++ C++G
Sbjct: 336 ATYTSLMNGMCRKG 349
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 25/286 (8%)
Query: 116 QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ----------------------GFHLN 153
PN +L + ++ L+FH+ V+ F
Sbjct: 62 SPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPG 121
Query: 154 QISYGTLINGLCKMGQTRAS--LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+ ++ L++ C+ + S ++L + ++PD V + + SLC+ V +A +L
Sbjct: 122 RSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDL 181
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFC 270
E+ P T+N L+ C L +DEM ++ PD+ ++ IL+D C
Sbjct: 182 MKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVC 241
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
++EA +++ + G KP+ Y ++M G+C +S+ ++A + M + GV P+
Sbjct: 242 NSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQI 301
Query: 331 SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
+YNT+I GL K V+EA M P+T T+ SL++G+C+
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 28/233 (12%)
Query: 310 VNKAKYILNSMPQRGVTP-NVQSYNTMINGLCKIKMVDEALNLFAEM--DCKNIVPNTVT 366
++ AK + NS+ P +++ +N+++ I +V++ + LF + N P T
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 367 FNSLIDGLCKS------------NIITYNSL----------LDALCKSHHVDKAIALIKK 404
F L+ C++ N++ N L + +LC++ VD+A L+K+
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT--VRTYTIMINGLCKE 462
+ ++ PD TYN L+ LC+ L E + D + + V + ++TI+I+ +C
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFV-DEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
EA+ L+SK+ + G PD + TI++ + +A + ++M G+
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+ + + + ++L P + I+ + S A+ + +++ G+ PD +T N
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
LI ++ A L ++ GY+P+T T+T+L+ G+C G
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/478 (21%), Positives = 203/478 (42%), Gaps = 28/478 (5%)
Query: 64 HYSTAISLSHQLEFTGITP-DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITF 122
H+ A+ + + G +++ NI++ + S+ ++++KG +P T+
Sbjct: 166 HWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTY 225
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEG 182
TLI G AL + + G ++++ G ++ K + + + + +K
Sbjct: 226 GTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSC 285
Query: 183 KLVKPDV------VMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCI 236
K D YNT+ID+ K + +A + M+ I+P+ VTFN++I+ +
Sbjct: 286 DENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGN 345
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
GQL E +L+ M + PD TYNIL+ K ++ A M G+KP+ V+
Sbjct: 346 NGQLGEVTSLMKTMKL-HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
Y +L+ + + V +A+ ++ M V + + + + + +M++++ + F
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH 464
Query: 357 CKNIVPNTVTFNSLIDG--------------LC-----KSNIITYNSLLDALCKSHHVDK 397
+ ++ +++ ID +C K +I YN ++ A S +K
Sbjct: 465 VAGNM-SSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEK 523
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A L + + G+ PD TYN L+ L + ++ + GY Y +I+
Sbjct: 524 ACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVIS 583
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
K G + A + +M + PD + + +I A + G +A + M G+
Sbjct: 584 SFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/518 (19%), Positives = 209/518 (40%), Gaps = 39/518 (7%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+ + F R+L P + F ++ SL ++ PD T N
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYN 371
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI+ + I A + ++ G +P+ +++ TL+ + V+ A +
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRK--IEGKLVKPDVVMYNTIIDSLCKDTLVT 206
+++ + L + S ++ + G + Y+ ID+ + ++
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG---YSANIDAYGERGYLS 488
Query: 207 DAFNLY--SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+A ++ + V R +V+ +N +I + I ++A L + M++ + PD TYN
Sbjct: 489 EAERVFICCQEVNKR---TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
LV + L M + G + + Y +++ + + ++N A+ + M +
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID-----GLCKSNI 379
+ P+V Y +IN V +A++ M I N+V +NSLI G
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 380 ITYNSLLDALCKSHHVD------------------KAIALIKKIRDQGIQPDVRTYNILM 421
Y LL + K+ + D KA A+ ++ +G + + T+ +++
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMML 724
Query: 422 DGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
+ GR + A ++ + + +Y ++ +G F EA+ +M +G
Sbjct: 725 CMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQ 784
Query: 482 PDAITFETIIRALFEKGENYKA----EKLLREMMARGL 515
PD TF+++ L + G + KA E++ ++ + RGL
Sbjct: 785 PDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGL 822
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 113/258 (43%), Gaps = 10/258 (3%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I + +++S VK+ + A + ++ I PD+V +LIN + + A S +
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ + G N++ + +LIK G + A + ++ N+ Y + C M
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS---CNKTQYPDVYTSNC-MIN 691
Query: 170 TRASLQLLRKIEG---KLVKPDVVMYNTIIDSLC---KDTLVTDAFNLYSEMVAMRILPS 223
+ ++RK E + + T LC K+ +A + +M M+IL
Sbjct: 692 LYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTD 751
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
+++NS++ F + G+ KEA+ EMV+ I PD T+ L K G K+A +
Sbjct: 752 PLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIE 811
Query: 284 VMMKQGVKPNVVTYTSLM 301
+ K+ +K + + S +
Sbjct: 812 EIRKKEIKRGLELWISTL 829
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 161/356 (45%), Gaps = 15/356 (4%)
Query: 33 VVSIFNRLLRMSPTPPIIE-FGKILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLNIL 90
+ FN + R S E F +++ L K + + +L + + T P+ VT I+
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA--LQFHDHVVAQ 148
Y + A K+ + T +F L+ LC + V A L F +V+
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLRDET-SFYNLVDALCEHKHVVEAEELCFGKNVIGN 182
Query: 149 GFHLNQISYGTLI-NGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
GF ++ LI G K+G + +K++ + V D+ Y+ +D +CK
Sbjct: 183 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A LY EM + R+ VV +N++I ++ I + EM + P+V T+N ++
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN---SMPQRG 324
C++G++++A +L M K+G +P+ +TY CL S + K IL+ M + G
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYM------CLFSRLEKPSEILSLFGRMIRSG 356
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
V P + +Y ++ + + L ++ M P++ +N++ID L + ++
Sbjct: 357 VRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 412
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVL--AKILKKGYQ-PNTITFTTLIKGLCLNGQVQTAL 139
D + L++ C + A + ++ G+ NT +++G G
Sbjct: 150 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 209
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
++ + +G + SY ++ +CK G+ +++L ++++ + +K DVV YNT+I ++
Sbjct: 210 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 269
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
V ++ EM P+V T N++I C G++++A +LDEM + PD
Sbjct: 270 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 329
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
TY L F + K E ++ M++ GV+P + TY LM + + Y+ +
Sbjct: 330 ITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKT 386
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPN 363
M + G TP+ +YN +I+ L + M+D A EM + + P
Sbjct: 387 MKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPR 430
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 163/360 (45%), Gaps = 52/360 (14%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVA-MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+N +ID L K ++ L + M+ +P+ VTF + + ++EAI D++
Sbjct: 84 FNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL 143
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVL--AVMMKQGVK-PNVVTYTSLMDGYCLV 307
N+ + YN LVDA C+ V EA + ++ G N + ++ G+ +
Sbjct: 144 DDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKL 202
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
K K M GVT ++ SY+ ++ +CK +A+ L+ EM + +
Sbjct: 203 GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRM------- 255
Query: 368 NSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
K +++ YN+++ A+ S V+ I + +++R++G +P+V T+N ++ LCE+
Sbjct: 256 --------KLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCED 307
Query: 428 GRLKNAQEVIQDLLTKG------------------------YPVTVR--------TYTIM 455
GR+++A ++ ++ +G + +R TY ++
Sbjct: 308 GRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVML 367
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ + G L + M+++G PD+ + +I AL +KG A + EM+ RGL
Sbjct: 368 MRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGL 427
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 191/437 (43%), Gaps = 60/437 (13%)
Query: 45 PTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGI--TPDIVTLNILINCYCHQAQITS 102
PTP F ++ +L K S+ + LE + TP+ + ++ I Y +I
Sbjct: 70 PTPQAYRF--VIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV-IAAYGFSGRIEE 126
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ----GFHLNQISYG 158
A V KI P+ T L+ L Q +L+ ++ + G L + ++G
Sbjct: 127 AIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEESTFG 183
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
LI+ LC++G+ + +L+R + V D +Y+ ++ S+CK +
Sbjct: 184 ILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS------------ 231
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
C + I L+++ +P + Y +++ + G+ KE
Sbjct: 232 ----------------CF-----DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEV 270
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+VL M V+P++V YT ++ G + KA + + + G+ P+V +YN ING
Sbjct: 271 VSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYING 330
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
LCK ++ AL + + M+ PN ++TYN L+ AL K+ + +A
Sbjct: 331 LCKQNDIEGALKMMSSMNKLGSEPN---------------VVTYNILIKALVKAGDLSRA 375
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
L K++ G+ + T++I++ E + A ++++ V +I+
Sbjct: 376 KTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISR 435
Query: 459 LCKEGLFDEALTLLSKM 475
LC++GL D+A+ LL+ +
Sbjct: 436 LCEKGLMDQAVELLAHL 452
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 166/362 (45%), Gaps = 27/362 (7%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIE--GKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
+Y +I L K Q +L +E K P+ + + +I + + +A ++
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESI-FRDVIAAYGFSGRIEEAIEVFF 132
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK----NINPDVYTYNILVDAF 269
++ R +PS T N+L+ ++ + ++++ L+ E++ K + + T+ IL+DA
Sbjct: 133 KIPNFRCVPSAYTLNALLL---VLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDAL 189
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI--LNSMPQRGVTP 327
C+ G+V AT ++ M + V + Y+ L+ C + + I L + + +P
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
++ Y ++ L + E +++ +M C + P+ ++ Y +L
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPD---------------LVCYTIVLQ 294
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ KA L ++ G+ PDV TYN+ ++GLC++ ++ A +++ + G
Sbjct: 295 GVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEP 354
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
V TY I+I L K G A TL +ME NG ++ TF+ +I A E E A LL
Sbjct: 355 NVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLL 414
Query: 508 RE 509
E
Sbjct: 415 EE 416
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 154/332 (46%), Gaps = 15/332 (4%)
Query: 186 KPDVVMYNTIIDSLCKDTLVTDAFN-LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
+P Y +I +L K + + + + LY V+ + F +I + G+++EAI
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAI 128
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE-ATNVLAVMMKQGVKPNVVTYTSLMDG 303
+ ++ P YT N L+ ++ + E +L + GV+ T+ L+D
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 304 YCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPN 363
C + EV+ A ++ M Q V + + Y+ +++ +CK K + C +++
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHK----------DSSCFDVIG- 237
Query: 364 TVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
L + Y ++ L + + ++++ +++ ++PD+ Y I++ G
Sbjct: 238 --YLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+ + A ++ +LL G V TY + INGLCK+ + AL ++S M G P+
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGL 515
+T+ +I+AL + G+ +A+ L +EM G+
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
DV+ L + +P + ++ ++ LV+ +S+ +Q++ + PD+V I++
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 92 NCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH 151
A + ++L G P+ T+ I GLC ++ AL+ + G
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 353
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
N ++Y LI L K G + L +++E V + ++ +I + + V A L
Sbjct: 354 PNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
E M + +I C G + +A+ LL +V
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 158/351 (45%), Gaps = 22/351 (6%)
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
P + Y + SL + + +M + + S T +I + G + +A+ L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 247 LDEMV-TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+ + T V YN L+ A C A ++ M+++G+KP+ TY L++G+C
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
++ +A+ L+ M +RG P + + +I GL ++ A + ++M VP+
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQ 288
Query: 366 TFNSLIDGLCKS--------------------NIITYNSLLDALCKSHHVDKAIALIKKI 405
TFN LI+ + KS +I TY +L+ A+ K +D+A L+
Sbjct: 289 TFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNC 348
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+ G +P Y ++ G+C G +A D+ K +P YT++I + G F
Sbjct: 349 VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF 408
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR-EMMARGL 515
+A L +M + G +P + F+ + L G++ A ++ + E+ RG+
Sbjct: 409 VDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 155/359 (43%), Gaps = 16/359 (4%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP + L + S + +L ++ + T +I+ NG V A++
Sbjct: 108 TPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 141 FHDHVVAQ-GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ V G Y +L++ LC + + L+R++ K +KPD Y +++
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
C + +A EM P + LI G G L+ A ++ +M PD+
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDI 287
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
T+NIL++A K G+V+ + K G+ ++ TY +L+ + ++++A +LN+
Sbjct: 288 QTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNN 347
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
+ G P Y +I G+C+ M D+A + F++M K PN + LI +C
Sbjct: 348 CVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT-MCGRG- 405
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
VD A L+ ++ + G+ P R ++++ DGL G+ A + Q
Sbjct: 406 ------------GKFVDAANYLV-EMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 148/349 (42%), Gaps = 8/349 (2%)
Query: 31 DDVVSIFNRLLRMSP--TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D + FN R +P TP +E+ ++ SL K Y + + Q++ + TL
Sbjct: 92 NDSLRFFN-WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLC 150
Query: 89 ILINCYCHQAQITSAFSVLAKILKK-GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
+I Y + A + + K G Q + +L+ LC A ++
Sbjct: 151 FIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIR 210
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+G ++ +Y L+NG C G+ + + + L ++ + P + +I+ L +
Sbjct: 211 KGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLES 270
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
A + S+M +P + TFN LI G+++ I + + D+ TY L+
Sbjct: 271 AKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIP 330
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
A K GK+ EA +L ++ G KP Y ++ G C + A + M + P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390
Query: 328 NVQSYNTMINGLCKI--KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
N Y TM+ +C K VD A N EM +VP + F+ + DGL
Sbjct: 391 NRPVY-TMLITMCGRGGKFVDAA-NYLVEMTEMGLVPISRCFDMVTDGL 437
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIE-FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+VD V +FN + + ++ + +L +L +K + A +L ++ G+ PD T
Sbjct: 161 HVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTY 220
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
IL+N +C ++ A L ++ ++G+ P LI+GL G +++A + +
Sbjct: 221 AILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTK 280
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
GF + ++ LI + K G+ +++ + D+ Y T+I ++ K + +
Sbjct: 281 GGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDE 340
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
AF L + V P + +I G C G +A + +M K P+ Y +L+
Sbjct: 341 AFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLIT 400
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
+ GK +A N L M + G+ P + + DG
Sbjct: 401 MCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDG 436
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 177/430 (41%), Gaps = 17/430 (3%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLA 108
+ + ++ L+K + + ++ G++P+ T+N + +C + A +
Sbjct: 357 VFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYR 416
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMG 168
+ G+ P +++ LI LC N V+ A + +G L ++ TL N LC G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 169 QTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFN 228
+ + +L+ + + P + II +LC V DA + + S F
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFT 536
Query: 229 SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK-EGKVKEATNVLAVMMK 287
SLIYG + + A L+ M K P Y ++ C+ E K L
Sbjct: 537 SLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL 596
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
+ V Y ++G + A+ + + M + G+TP V S M+ K + + +
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 348 ALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
AL+ F ++ + K+ Y ++ LCK++ +D A+ +++++
Sbjct: 657 ALHFFHDLREQG----------------KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKG 700
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+G+QP + Y + + LC E + A ++ + G +T ++++ K E
Sbjct: 701 EGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYE 760
Query: 468 ALTLLSKMED 477
A T + +ED
Sbjct: 761 AWTRMRNIED 770
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/519 (21%), Positives = 209/519 (40%), Gaps = 63/519 (12%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
+L +LV+ K + + + Q+ G VT +IL+ +C Q ++ A L +L
Sbjct: 223 LLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPND 281
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
L+ LC + Q A + D + G +Y I L K G
Sbjct: 282 PAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPA 341
Query: 175 QLLRKI---EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
L+KI EG + +V YN+++ L K+ + +++ +EM+ + P+ T N+ +
Sbjct: 342 DFLQKISPLEG--CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAAL 399
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
FC G + EA+ L P +YN L+ C V++A +VL + +G
Sbjct: 400 CFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHF 459
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
T+++L + C + + A+ ++ + +R + P + +I+ LC + V++AL +
Sbjct: 460 LGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMI 519
Query: 352 FAEMDCKNIVPNTVTFNSLIDG---LCKSNIIT-----------------YNSLLDALCK 391
+ + + F SLI G L + +I Y +++ +C+
Sbjct: 520 NELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCE 579
Query: 392 --------------------SHHVD---------------KAIALIKKIRDQ-GIQPDVR 415
H V K L+ + D+ GI P V
Sbjct: 580 MESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVA 639
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+ +++ + ++ +A DL +G R Y +MI GLCK D+A+ L +M
Sbjct: 640 SNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEM 698
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
+ G P +E I+ L + + +A L+ E G
Sbjct: 699 KGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSG 737
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/487 (20%), Positives = 190/487 (39%), Gaps = 53/487 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D+ LL P G ++ +L + + A L +++ G NI
Sbjct: 267 LDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNI 326
Query: 90 LINCYCHQAQITSAFSVLAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
I + + L KI +G + + +++ L + ++ +
Sbjct: 327 WIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVR 386
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G N+ + + CK G +L+L R P + YN +I +LC + V A
Sbjct: 387 GVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQA 446
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+++ + TF++L C G+ A L+ +++ P ++ A
Sbjct: 447 YDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISA 506
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
C GKV++A + + K GV + +TSL+ G + + A ++ M ++G TP
Sbjct: 507 LCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPT 566
Query: 329 VQSYNTMINGLCKIKMVD-------------------EALNLFAE--------------- 354
Y +I +C+++ + +A NLF E
Sbjct: 567 RSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVY 626
Query: 355 --MDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
MD I P SNI+ S L K+ + A+ +R+QG +
Sbjct: 627 DMMDRDGITPTVA-----------SNILMLQSYL----KNEKIADALHFFHDLREQG-KT 670
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
R Y +++ GLC+ +L +A ++++ +G ++ Y + I LC E +DEA+ L+
Sbjct: 671 KKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLV 730
Query: 473 SKMEDNG 479
++ +G
Sbjct: 731 NEFRKSG 737
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 154/377 (40%), Gaps = 52/377 (13%)
Query: 124 TLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGK 183
L+ G + G+ ALQ ++ +G L+ Y L+N L
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNAL------------------- 227
Query: 184 LVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEA 243
++ C D+F++ + +++R VT + L+ FC G+L EA
Sbjct: 228 ------------VEEKC-----FDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEA 270
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
L ++ + ILVDA C + K +EAT +L + G Y +
Sbjct: 271 EDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRA 330
Query: 304 YCLVSEVNK-AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
+N A ++ P G V YN+M+ L K +D ++ EM + + P
Sbjct: 331 LIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSP 390
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
N T N+ LC CK+ VD+A+ L + + G P +YN L+
Sbjct: 391 NKKTMNA---ALC------------FFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIH 435
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
LC ++ A +V++ + +G+ + +T++ + N LC +G D A L+ + +P
Sbjct: 436 TLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLP 495
Query: 483 DAITFETIIRALFEKGE 499
I II AL + G+
Sbjct: 496 KRIAGCKIISALCDVGK 512
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 206/509 (40%), Gaps = 69/509 (13%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
+N+D V I ++ +P L K A+ L G P ++
Sbjct: 371 NNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N LI+ C + A+ VL + +G+ TF+TL LC G+ A +
Sbjct: 431 NYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAE 490
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASL--------------------------------- 174
+ +I+ +I+ LC +G+ +L
Sbjct: 491 RDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI 550
Query: 175 --QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRIL---PSVVTFNS 229
+L+ +++ K P +Y +I +C+ + + N ++ ++ ++ V +N
Sbjct: 551 AAKLIIRMQEKGYTPTRSLYRNVIQCVCE--MESGEKNFFTTLLKFQLSLWEHKVQAYNL 608
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
I G G+ K A + D M I P V + +++ ++ K K+ +A + + +QG
Sbjct: 609 FIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG 668
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
K Y ++ G C ++++ A + L M G+ P+++ Y I LC + DEA+
Sbjct: 669 -KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV 727
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
L E + + I N++ +N++ KS V +A ++ I D+
Sbjct: 728 GLVNEFR-----KSGRRITAFI-----GNVLLHNAM-----KSKGVYEAWTRMRNIEDK- 771
Query: 410 IQPDVRTYNILMDGLCE-----EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
P++++ L+ GL E LK EVI+ K YP+ + TY +++ +
Sbjct: 772 -IPEMKSLGELI-GLFSGRIDMEVELKRLDEVIE----KCYPLDMYTYNMLLRMIVMNQA 825
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRA 493
++A ++ ++ G +P+ T + RA
Sbjct: 826 -EDAYEMVERIARRGYVPNERTDMILERA 853
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 167/407 (41%), Gaps = 57/407 (14%)
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISY---GTLINGLCKMGQT 170
G+ TF + K L V + F D V GF + S L+ G G+T
Sbjct: 141 GFHHTRATFHAIFKILRGAKLVTLMIDFLDRSV--GFESCRHSLRLCDALVVGYAVAGRT 198
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+LQ + + + D Y+ ++++L ++ D+F++ + +++R
Sbjct: 199 DIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCF-DSFDVIFDQISVR----------- 246
Query: 231 IYGF-CIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
GF C V T++ILV FCK+GK+ EA + L ++
Sbjct: 247 --GFVCAV-----------------------THSILVKKFCKQGKLDEAEDYLRALLPND 281
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
L+D C + +A +L+ + G ++YN I L K ++
Sbjct: 282 PAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPA 341
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQG 409
+ ++ S ++G C+ + YNS++ L K +++D ++ ++ +G
Sbjct: 342 DFLQKI-------------SPLEG-CELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
+ P+ +T N + C+ G + A E+ + G+ T +Y +I+ LC ++A
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY 447
Query: 470 TLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+L D G TF T+ AL KG+ A +L+ R LL
Sbjct: 448 DVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLL 494
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 179/430 (41%), Gaps = 79/430 (18%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKG-YQPNTITFTTLIKGLCLNGQVQTALQFHDHVV 146
N +I Y Q +F++ + K+ + P+ TFTTL K L+ V LQ H +
Sbjct: 46 NSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIW 105
Query: 147 AQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVT 206
GF C D+ + ++D K +
Sbjct: 106 RFGF--------------C---------------------ADMYVSTGVVDMYAKFGKMG 130
Query: 207 DAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILV 266
A N + EM S V++ +LI G+ G+L A L D+M DV YN ++
Sbjct: 131 CARNAFDEMPHR----SEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMM 183
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
D F K G + A + M + V+T+T+++ GYC + +++ A+ + ++MP+R
Sbjct: 184 DGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMPER--- 236
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDC-KNIVPNTVTFNSLIDGLCKSNIITYNSL 385
N+ S+NTMI G C+ K E + LF EM ++ P+ VT S++ + + ++
Sbjct: 237 -NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEW 295
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ +DK + + I D M C G ++ A+ + ++ K
Sbjct: 296 CHCFVQRKKLDKKVKVCTAILD-------------MYSKC--GEIEKAKRIFDEMPEK-- 338
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKM--EDNGCMPDAITFETIIRALFEKG---EN 500
V ++ MI+G G AL L M E+ PD IT +I A G E
Sbjct: 339 --QVASWNAMIHGYALNGNARAALDLFVTMMIEEK---PDEITMLAVITACNHGGLVEEG 393
Query: 501 YKAEKLLREM 510
K ++REM
Sbjct: 394 RKWFHVMREM 403
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 133/323 (41%), Gaps = 62/323 (19%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
+ + + ++ G +G + +A + D + H I++ T+I+G C + A+
Sbjct: 175 DVVIYNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYCNIKDIDAA---- 226
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
RK+ + + ++V +NT+I C++ + L+ EM A
Sbjct: 227 RKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQA-------------------- 266
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
T +++PD T ++ A G + + ++ + V
Sbjct: 267 --------------TTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
T+++D Y E+ KAK I + MP++ V S+N MI+G AL+LF M
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 358 KNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
+ P+ +T ++I + L++ K HV +R+ G+ + Y
Sbjct: 369 EE-KPDEITMLAVI------TACNHGGLVEEGRKWFHV---------MREMGLNAKIEHY 412
Query: 418 NILMDGLCEEGRLKNAQEVIQDL 440
++D L G LK A+++I ++
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNM 435
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++PD+ YN +I C+ + ++++ +EM I P+ +F +I GF + E
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
+L M + +N V TYNI + + CK K KEA +L M+ G+KPN VTY+ L+ G+
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C + +AK + M RG P+ + Y T+I LCK + AL+L E KN VP+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 365 VTFNSLIDGLCKSNII 380
SL++GL K + +
Sbjct: 363 SIMKSLVNGLAKDSKV 378
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTY 262
++ + ++ ++ I +V + N+L++ + KEA + EM I PD+ TY
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N ++ FC+ G + +++A M ++G+KPN ++ ++ G+ + ++ +L M
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
RGV V +YN I LCK K EA L M + PNTVT Y
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT---------------Y 295
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ L+ C ++A L K + ++G +PD Y L+ LC+ G + A + ++ +
Sbjct: 296 SHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESME 355
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
K + + ++NGL K+ +EA L+ ++++
Sbjct: 356 KNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)
Query: 305 CLVS-EVNKAKYILNSMPQ-RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
CLV+ + +AK + MP+ G+ P++++YN MI C+ + ++ AEM+ K I P
Sbjct: 161 CLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKP 220
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
N+ +F +I G + KS V K +A++K D+G+ V TYNI +
Sbjct: 221 NSSSFGLMISGFYAED------------KSDEVGKVLAMMK---DRGVNIGVSTYNIRIQ 265
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
LC+ + K A+ ++ +L+ G TY+ +I+G C E F+EA L M + GC P
Sbjct: 266 SLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKP 325
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
D+ + T+I L + G+ A L +E M + +
Sbjct: 326 DSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQL-EFTGITPDIVTLN 88
+D + +F L + + + +L + + K Y A + ++ + GI PD+ T N
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+I +C +S++S++A++ +KG +PN+ +F
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSF-------------------------- 225
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G +I+G ++ ++L ++ + V V YN I SLCK +A
Sbjct: 226 ---------GLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEA 276
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L M++ + P+ VT++ LI+GFC +EA L MV + PD Y L+
Sbjct: 277 KALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYY 336
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
CK G + A ++ M++ P+ SL++G S+V +AK ++ + ++ T N
Sbjct: 337 LCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRN 395
Query: 329 VQSYNTMINGL 339
V+ +N + L
Sbjct: 396 VELWNEVEAAL 406
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%)
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + +Y +I C+ G +S ++ ++E K +KP+ + +I + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ + M + V T+N I C + KEA ALLD M++ + P+ TY+ L+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
FC E +EA + +M+ +G KP+ Y +L+ C + A + ++ P+
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+++NGL K V+EA L ++ K
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 344 MVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIK 403
M+D +L +F +++ I + N+L L L + + I+
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNAL--------------LFACLVAKDYKEAKRVYIE 176
Query: 404 KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEG 463
+ GI+PD+ TYN ++ CE G ++ ++ ++ KG ++ +MI+G E
Sbjct: 177 MPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAED 236
Query: 464 LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
DE +L+ M+D G T+ I++L ++ ++ +A+ LL M++ G+
Sbjct: 237 KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 169/374 (45%), Gaps = 16/374 (4%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N +I ++ AF K + G + +T T+ L+ G A + ++ +
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
L+ +Y +I L K G+ A+ +L ++++ + ++P ++++++DS+ K +
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ +Y EM PS F SLI + G+L A+ L DEM P+ Y ++++
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ K GK++ A V M K G P TY+ L++ + +V+ A I NSM G+ P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
+ SY +++ L ++VD A + EM +D +C S+++
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMGYS---------VD-VCASDVLM------ 530
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
K VD A+ ++ + GI+ + L + + G +A+ +++ L+ V
Sbjct: 531 IYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKV 590
Query: 448 TVRTYTIMINGLCK 461
+ YT ++ L +
Sbjct: 591 DLVLYTSILAHLVR 604
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 181/441 (41%), Gaps = 31/441 (7%)
Query: 62 MKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK-GYQPNTI 120
++ + L QL+ P++V + + ++ +A S+ K+ Y P+
Sbjct: 150 VQRWKWGPELETQLDKLQFVPNMVHITQSLKIV---KEVDAALSLFRWAKKQPWYLPSDE 206
Query: 121 TFTTLIKGLCLNGQVQTALQ--FHDHVVAQGFH--LNQISYGTLINGLCKMGQTRASLQL 176
+ L GL G+ +Q F + V H L+ +Y +I L K + +
Sbjct: 207 CYVVLFDGLN-QGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCC 265
Query: 177 LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCI 236
+K + K D YN ++ L AF +Y M L T+ +I
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 237 VGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
G+L A L +M + + P ++ LVD+ K G++ + V M G +P+
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 297 YTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD 356
+ SL+D Y +++ A + + M + G PN Y +I K ++ A+ +F +M+
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 357 CKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+P TY+ LL+ S VD A+ + + + G++P + +
Sbjct: 446 KAGFLPTPS---------------TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSS 490
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV-RTYTIMINGLCKEGLFDEALTLLSKM 475
Y L+ L + + A +++ ++ GY V V + +MI K+ D AL L M
Sbjct: 491 YISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI--YIKDASVDLALKWLRFM 548
Query: 476 EDNGCMPDAITFETIIRALFE 496
+G T IIR LFE
Sbjct: 549 GSSGIK----TNNFIIRQLFE 565
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 31/321 (9%)
Query: 221 LPS----VVTFNSLIYGFCIVGQLKEAIALLDEMV---TKNINPDVYTYNILVDAFCKEG 273
LPS VV F+ L G VG +L +EMV + + + YN ++ K
Sbjct: 202 LPSDECYVVLFDGLNQGRDFVG----IQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAE 257
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
K++ A + G K + TY +LM + KA I SM + + +Y
Sbjct: 258 KLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYE 317
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------------- 377
+I L K +D A LF +M + + P+ F+SL+D + K+
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGF 377
Query: 378 ----NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+ + SL+D+ K+ +D A+ L +++ G +P+ Y ++++ + G+L+ A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
V +D+ G+ T TY+ ++ G D A+ + + M + G P ++ +++
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTL 497
Query: 494 LFEKGENYKAEKLLREMMARG 514
L K A K+L EM A G
Sbjct: 498 LANKRLVDVAGKILLEMKAMG 518
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ G + Q+YN ++ + +A ++ M+ +SL+DG T
Sbjct: 271 ESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME---------KTDSLLDG------ST 315
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
Y ++ +L KS +D A L ++++++ ++P ++ L+D + + GRL + +V ++
Sbjct: 316 YELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQ 375
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENY 501
G+ + + +I+ K G D AL L +M+ +G P+ + II + + G+
Sbjct: 376 GFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLE 435
Query: 502 KAEKLLREMMARGLL 516
A + ++M G L
Sbjct: 436 VAMTVFKDMEKAGFL 450
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/290 (18%), Positives = 123/290 (42%), Gaps = 1/290 (0%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D +F ++ P F ++ S+ K T++ + +++ G P
Sbjct: 328 RLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFV 387
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
LI+ Y ++ +A + ++ K G++PN +T +I+ +G+++ A+ +
Sbjct: 388 SLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKA 447
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
GF +Y L+ GQ +++++ + ++P + Y +++ L LV A
Sbjct: 448 GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVA 507
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
+ EM AM V + L+ + + A+ L M + I + + L ++
Sbjct: 508 GKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFES 566
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
K G A +L ++ K ++V YTS++ + +K + +++
Sbjct: 567 CMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQLMS 616
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 207/485 (42%), Gaps = 57/485 (11%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTL-- 125
A+ L + G+ P ILI+ + SA+ + ++ + N + ++
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 126 -IKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL 184
I+ LCL+ +VQ A +VA G LN Y + G + L + +++
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK--- 318
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
+PDV + N I+ SLC+ A+ E+ + VTF LI C G +K A+
Sbjct: 319 YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAV 378
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
L E+++K PDVY+YN ++ ++G + +L M + G+ ++ T+ ++ GY
Sbjct: 379 LYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGY 438
Query: 305 CLVSEVNKAKYILNSMPQRGV-------TPNVQSYNTM-------------INGLCKIKM 344
C + +AK I+N M G+ P ++++ + + K +
Sbjct: 439 CKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEF 498
Query: 345 VDE---ALNLFAEMDCKNIVPNTV-------TFNSLI-----DGLCKSNI---------- 379
D+ L L ++D N V FNSLI DG ++ +
Sbjct: 499 FDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWG 558
Query: 380 -----ITYNSLLDALCKSH-HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
++ L+ +LC S H+ +I+L++K Q D T N L+ C++G +++
Sbjct: 559 QKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHS 618
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ + ++ +P+ TYT +I CK+ ++ L + +++ +PD +
Sbjct: 619 KLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNC 678
Query: 494 LFEKG 498
L KG
Sbjct: 679 LVRKG 683
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 218/522 (41%), Gaps = 61/522 (11%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + +IL SL + A +LE G D VT ILI C++ I A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L++I+ KGY+P+ ++ ++ GL G Q D + G L+ ++ ++ G CK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 167 MGQTRASLQLLRKIEG-------KLVKP-----DVVMYNTIIDSLCKDT----------- 203
Q + +++ K+ G K+ P +V ++ + L +D
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFD 500
Query: 204 -------LVTDAFNLYSEMVAMRILPSVV-TFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
L TD + Y + V M + SV+ FNSLI G L+ A+ LLDEM
Sbjct: 501 DLGNGLYLHTD-LDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQ 559
Query: 256 NPDVYTYNILVDAFC-KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
++ +L+ + C ++ + ++L K + + T L+ YC +K
Sbjct: 560 KLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSK 619
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
I + M Q + +Y ++I CK + +++ LN++ N +P+ L + L
Sbjct: 620 LIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCL 679
Query: 375 CKSNI------------ITYNSLLDALCKSHHVDK---------AIALIKKIRDQGIQPD 413
+ + I+Y C+ V+K A +++K++ +G +
Sbjct: 680 VRKGLVEEVVQLFERVFISYPLSQSEACRI-FVEKLTVLGFSCIAHSVVKRLEGEGCIVE 738
Query: 414 VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS 473
YN L+ GLC E + A ++ ++L K + ++ + ++I LC+ A L
Sbjct: 739 QEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAE 798
Query: 474 KMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+++ + +I+ L G+ AE LR M++ GL
Sbjct: 799 QID------SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGL 834
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 205/486 (42%), Gaps = 23/486 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V++VV +F R+ P + L + A S+ +LE G + N
Sbjct: 685 VEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNH 744
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI C + + ++AF++L ++L K + P+ + LI LC + TA + + +
Sbjct: 745 LIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSY 804
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
H LI GL G+ + LR + + +YN + CK
Sbjct: 805 VHY------ALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVE 858
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD-VYTYNILVDA 268
+ MV I+ SV ++ + C+ Q AI+L + ++ NP V YN+L+
Sbjct: 859 EVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFY 918
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ E VL M +GV P+ T+ L+ GY ++ + + L++M +G+ PN
Sbjct: 919 MFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPN 978
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+S + + LC V +AL+L+ M+ K G + + +++
Sbjct: 979 NRSLRAVTSSLCDNGDVKKALDLWQVMESK--------------GWNLGSSVVQTKIVET 1024
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
L + KA + ++ G+ Y+ ++ L + G L A ++ +L
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPG 1082
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
+Y +INGL + D+A+ ++M + G P T+ ++ E + ++E+L++
Sbjct: 1083 SSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIK 1142
Query: 509 EMMARG 514
M+ G
Sbjct: 1143 SMVGLG 1148
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 190/441 (43%), Gaps = 33/441 (7%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D VT LI C+C + + +V + P+ L L G V+ +Q
Sbjct: 633 DNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLF 692
Query: 143 DHVVAQGFHLNQISY-GTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
+ V + L+Q + L +G + + +++++EG+ + +YN +I LC
Sbjct: 693 ERVFIS-YPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCT 751
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ + AF + EM+ + +PS+ + LI C + A L +++ + Y
Sbjct: 752 EKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSS------YV 805
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+ L+ GK+ +A N L +M+ G+ Y + GYC + K + +L M
Sbjct: 806 HYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMV 865
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC--KSN- 378
++ + +V+SY + +C + P +++ SL + L +SN
Sbjct: 866 RKNIICSVKSYREYVRKMC-------------------LEPQSLSAISLKEFLLLGESNP 906
Query: 379 --IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEV 436
+I YN L+ + ++ + + ++ +++ +G+ PD T+N L+ G ++
Sbjct: 907 GGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRY 966
Query: 437 IQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC-MPDAITFETIIRALF 495
+ +++KG R+ + + LC G +AL L ME G + ++ I+ L
Sbjct: 967 LSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLI 1026
Query: 496 EKGENYKAEKLLREMMARGLL 516
KGE KAE L + G++
Sbjct: 1027 SKGEIPKAEDFLTRVTRNGMM 1047
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 135/272 (49%), Gaps = 5/272 (1%)
Query: 74 QLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
+++ G+ PD T N L++ Y A +S+ L+ ++ KG +PN + + LC NG
Sbjct: 934 EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNG 993
Query: 134 QVQTALQFHDHVVAQGFHL-NQISYGTLINGLCKMGQ-TRASLQLLRKIEGKLVKPDVVM 191
V+ AL + ++G++L + + ++ L G+ +A L R ++ P+
Sbjct: 994 DVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPN--- 1050
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
Y+ II L + A +L + M+ + +P +++S+I G QL +A+ EMV
Sbjct: 1051 YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMV 1110
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
++P + T++ LV FC+ +V E+ ++ M+ G P+ + +++D + +
Sbjct: 1111 ELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTV 1170
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIK 343
KA ++ M + G + +++ ++I+ + K
Sbjct: 1171 KASEMMEMMQKCGYEVDFETHWSLISNMSSSK 1202
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 132/280 (47%), Gaps = 21/280 (7%)
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSL 300
++A+ L D M K + P Y IL+D + + + A + ++ + N + S+
Sbjct: 200 RKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI 259
Query: 301 ---MDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
++ CL +V +A+ + + G N Y+ + G + + ++ L+ E+
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKY 319
Query: 358 KNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
+ ++ N +L +LC+ ++A ++++ G + D T+
Sbjct: 320 E------------------PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTF 361
Query: 418 NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
IL+ C EG +K A + ++++KGY V +Y +++GL ++GL+ +L +M++
Sbjct: 362 GILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKE 421
Query: 478 NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
NG M TF+ ++ + + +A++++ +M GL+E
Sbjct: 422 NGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIE 461
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 172/450 (38%), Gaps = 61/450 (13%)
Query: 122 FTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC-KMGQTRASLQLLRKI 180
F +LI +G +QTAL+ D + G L++ S+ L+ LC R S+ LL K
Sbjct: 531 FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKW 590
Query: 181 EGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQL 240
+ D N ++ CK + ++ +MV M VT+ SLI FC L
Sbjct: 591 PKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETL 650
Query: 241 KEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNV-----LAVMMKQGVKPNVV 295
+ + + N PD+ L + ++G V+E + ++ + Q +
Sbjct: 651 NDLLNVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIF 710
Query: 296 TYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEM 355
+ G+ + A ++ + G + YN +I GLC K A + EM
Sbjct: 711 VEKLTVLGFSCI-----AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEM 765
Query: 356 DCKNIVPNTVTFNSLIDGLCKSN----IITYNSLLDALCKSHHVDKAIALIKKIRD---- 407
K +P+ + LI LC++N +D+ + + K ++L K+ D
Sbjct: 766 LDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQ 825
Query: 408 ------QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK 461
G+ + YN++ G C+ +EV+ ++ K +V++Y + +C
Sbjct: 826 LRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCL 885
Query: 462 EGLFDEALTL------------------------------------LSKMEDNGCMPDAI 485
E A++L L +M+ G +PD
Sbjct: 886 EPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDET 945
Query: 486 TFETIIRALFEKGENYKAEKLLREMMARGL 515
TF ++ + + + L M+++G+
Sbjct: 946 TFNFLVHGYSSSADYSSSLRYLSAMISKGM 975
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 185/403 (45%), Gaps = 37/403 (9%)
Query: 78 TGITPDIVTLN-ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQ 136
TG+ D VT + +L C + + A+ V +I K N + T+I+G + +
Sbjct: 51 TGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK----NPFVWNTIIRGFSRSSFPE 106
Query: 137 TALQ-FHDHVVAQ-GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
A+ F D + + +++Y ++ ++GQ R QL + + ++ D + NT
Sbjct: 107 MAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNT 166
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
++ + +A+ ++ M+ VV +NS+I GF G + +A L DEM +N
Sbjct: 167 MLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
++N ++ F + G+ K+A ++ M ++ VKP+ T SL++ + + +
Sbjct: 223 ----GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGR 278
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+I + + N +I+ CK ++E LN+F +C P
Sbjct: 279 WIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF---EC---AP------------ 320
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
K + +NS++ L + ++A+ L ++ G++PD ++ ++ G + A
Sbjct: 321 -KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRAD 379
Query: 435 EVIQDLLTKGYPV--TVRTYTIMINGLCKEGLFDEALTLLSKM 475
E + L+ + Y + +++ YT+M+N L GL +EA L+ M
Sbjct: 380 EFFR-LMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 182/408 (44%), Gaps = 44/408 (10%)
Query: 51 EFGKILTSLVKMKHYSTAISLSHQLEFTGITP----------------DIVTLNILINCY 94
E +I SL+K S ++ S L F +P + N +I +
Sbjct: 40 ELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGF 99
Query: 95 CHQAQITSAFSVLAKIL--KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
+ A S+ +L +P +T+ ++ K GQ + Q H V+ +G
Sbjct: 100 SRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLED 159
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ T+++ M T L +I ++ DVV +N++I K L+ A NL+
Sbjct: 160 DSFIRNTMLH----MYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLF 215
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
EM + V++NS+I GF G+ K+A+ + EM K++ PD +T L++A
Sbjct: 216 DEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYL 271
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
G ++ + +++ + N + T+L+D YC + + + P++ + +
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK----QLSCW 327
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
N+MI GL + A++LF+E++ + P++V+F ++ S +
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV------------ 375
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
H D+ L+K+ I+P ++ Y ++++ L G L+ A+ +I+++
Sbjct: 376 HRADEFFRLMKE--KYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 158/329 (48%), Gaps = 29/329 (8%)
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMV--AMRILPSVVTFNSLIYGFCIVGQLKEAIALLD 248
++NTII + + A +++ +M+ + + P +T+ S+ + +GQ ++ L
Sbjct: 91 VWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
++ + + D + N ++ + G + EA + M + +VV + S++ G+
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM----IGFDVVAWNSMIMGFAKCG 206
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+++A+ + + MPQR N S+N+MI+G + +AL++F EM K++ P+ T
Sbjct: 207 LIDQAQNLFDEMPQR----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEG 428
SL+ N Y L A + + + I +R++ + + L+D C+ G
Sbjct: 263 SLL------NACAY---LGASEQGRWIHEYI-----VRNR-FELNSIVVTALIDMYCKCG 307
Query: 429 RLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFE 488
++ V + K + + MI GL G + A+ L S++E +G PD+++F
Sbjct: 308 CIEEGLNVFECAPKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFI 363
Query: 489 TIIRALFEKGENYKAEKLLREMMARGLLE 517
++ A GE ++A++ R M + ++E
Sbjct: 364 GVLTACAHSGEVHRADEFFRLMKEKYMIE 392
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 110/260 (42%), Gaps = 14/260 (5%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+D ++F+ + P + + +++ V+ + A+ + +++ + PD T+
Sbjct: 208 IDQAQNLFDEM----PQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+N + + I++ ++ N+I T LI C G ++ L + +
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK- 322
Query: 150 FHLNQIS-YGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
Q+S + ++I GL G ++ L ++E ++PD V + ++ + V A
Sbjct: 323 ----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 209 FNLYSEMVAMRIL-PSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+ M ++ PS+ + ++ G L+EA AL+ M + D ++ L+
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLS 435
Query: 268 AFCKEGKVKEATNVLAVMMK 287
A K G V+ A + K
Sbjct: 436 ACRKIGNVEMAKRAAKCLKK 455
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK- 253
II K + +A ++ EM SV++FN+L+ + + + L +E+ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
+I PD+ +YN L+ A C++ + EA +L + +G+KP++VT+ +L+ L +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ I M ++ V ++++YN + GL E +NLF E+ + P+ +FN++I G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+D+A A K+I G +PD T+ +L+ +C+ G ++A
Sbjct: 295 SINEG---------------KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESA 339
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
E+ ++ +K Y V T +++ L K +EA
Sbjct: 340 IELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 107/205 (52%), Gaps = 1/205 (0%)
Query: 175 QLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+L ++ GKL +KPD+V YNT+I +LC+ + +A L E+ + P +VTFN+L+
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
+ GQ + + +MV KN+ D+ TYN + E K KE N+ + G+KP+
Sbjct: 225 SYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
V ++ +++ G ++++A+ + + G P+ ++ ++ +CK + A+ LF
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 354 EMDCKNIVPNTVTFNSLIDGLCKSN 378
E K + T L+D L K +
Sbjct: 345 ETFSKRYLVGQTTLQQLVDELVKGS 369
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 130/265 (49%), Gaps = 21/265 (7%)
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR- 323
++ + K G + A V M + K +V+++ +L+ Y L + + + + N +P +
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL------------- 370
+ P++ SYNT+I LC+ + EA+ L E++ K + P+ VTFN+L
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 371 -------IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
++ +I TYN+ L L + + L +++ G++PDV ++N ++ G
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
EG++ A+ ++++ GY T+ +++ +CK G F+ A+ L + +
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 484 AITFETIIRALFEKGENYKAEKLLR 508
T + ++ L + + +AE++++
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVK 379
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 20/230 (8%)
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M K+G +++ Y A+ + MP R +V S+N +++ K
Sbjct: 106 MSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKK 159
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
D LF E+ P ++ K +I++YN+L+ ALC+ + +A+AL+ +
Sbjct: 160 FDVVEELFNEL------PGKLSI--------KPDIVSYNTLIKALCEKDSLPEAVALLDE 205
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
I ++G++PD+ T+N L+ +G+ + +E+ ++ K + +RTY + GL E
Sbjct: 206 IENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAK 265
Query: 465 FDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARG 514
E + L +++ +G PD +F +IR +G+ +AE +E++ G
Sbjct: 266 SKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHG 315
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 1/237 (0%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFT-GITPDIVTLNILINCYCHQAQITSAFSVL 107
++ F +L++ K + L ++L I PDIV+ N LI C + + A ++L
Sbjct: 144 VLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALL 203
Query: 108 AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM 167
+I KG +P+ +TF TL+ L GQ + + +V + ++ +Y + GL
Sbjct: 204 DEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANE 263
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTF 227
+++ + L +++ +KPDV +N +I + + +A Y E+V P TF
Sbjct: 264 AKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATF 323
Query: 228 NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
L+ C G + AI L E +K T LVD K K +EA ++ +
Sbjct: 324 ALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKI 380
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 9/239 (3%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKIL-----KKGYQPNTITFTTLIKGLCLNGQVQTA 138
+++ N L++ Y +++ F V+ ++ K +P+ +++ TLIK LC + A
Sbjct: 144 VLSFNALLSAY----RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEA 199
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
+ D + +G + +++ TL+ GQ ++ K+ K V D+ YN +
Sbjct: 200 VALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLG 259
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
L + + NL+ E+ A + P V +FN++I G G++ EA A E+V PD
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
T+ +L+ A CK G + A + + T L+D S+ +A+ I+
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIV 378
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 90/214 (42%), Gaps = 36/214 (16%)
Query: 31 DDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
D V +FN L ++S P I+ + ++ +L + A++L ++E G+ PDIVT N
Sbjct: 161 DVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNT 220
Query: 90 LINCYCHQAQITSAFSVLAKILKK-----------------------------------G 114
L+ + Q + AK+++K G
Sbjct: 221 LLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASG 280
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+ +F +I+G G++ A ++ +V G+ ++ ++ L+ +CK G +++
Sbjct: 281 LKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAI 340
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+L ++ K ++D L K + +A
Sbjct: 341 ELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 188/392 (47%), Gaps = 46/392 (11%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY--CHQAQITSAFSVLAKI 110
G+ +VKM H + +E G++ DI N LI+CY C + A K+
Sbjct: 129 GQSWLPVVKMMH--------NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAM----KL 176
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQT 170
+K + +T+++ +++ GL G+++ A + D + + IS+ T+++G + +
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREM 232
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS--VVTFN 228
+ +L K+ + + V ++T++ K + A ++ +M LP+ VVT+
Sbjct: 233 SKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWT 284
Query: 229 SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
+I G+ G LKEA L+D+MV + D ++ A + G + + +++ +
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
+ N +L+D Y + KA + N +P++ ++ S+NTM++GL EA
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEA 400
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+ LF+ M + I P+ VTF I LC N + L+D +D ++ +K+ D
Sbjct: 401 IELFSRMRREGIRPDKVTF---IAVLCSCN---HAGLID-----EGIDYFYSM-EKVYD- 447
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+ P V Y L+D L GRLK A +V+Q +
Sbjct: 448 -LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 192/455 (42%), Gaps = 79/455 (17%)
Query: 54 KILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
K++++L + + A+ + +Q++ P++ N LI + +Q AF V +++ +
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQ----EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G + T+ L+K + H+H+ G
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG------------------------ 147
Query: 174 LQLLRKIEGKLVKPDVVMYNTIID--SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
+ D+ + N +ID S C V DA L+ +M V++NS++
Sbjct: 148 -----------LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSML 192
Query: 232 YGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
G G+L++A L DEM + D+ ++N ++D + + ++ +A + M ++
Sbjct: 193 GGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER--- 245
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
N V++++++ GY ++ A+ + + MP NV ++ +I G + ++ EA L
Sbjct: 246 -NTVSWSTMVMGYSKAGDMEMARVMFDKMPL--PAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
+M + + S++ +S +++ + ++ K ++
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS-------------- 348
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
+ N L+D + G LK A +V D+ K + ++ M++GL G EA+ L
Sbjct: 349 -NAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIEL 403
Query: 472 LSKMEDNGCMPDAITFETII-----RALFEKGENY 501
S+M G PD +TF ++ L ++G +Y
Sbjct: 404 FSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDY 438
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 145/357 (40%), Gaps = 80/357 (22%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
V D + +F ++ + + +L LVK A L ++ D+++ N
Sbjct: 169 GVRDAMKLFEKMSERD----TVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWN 220
Query: 89 ILINCYCHQAQITSAFSVLAKILKK----------GYQP-------------------NT 119
+++ Y +++ AF + K+ ++ GY N
Sbjct: 221 TMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNV 280
Query: 120 ITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRK 179
+T+T +I G G ++ A + D +VA G + + +++ + G +++
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 180 IEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ 239
++ + + + N ++D K + AF++++++ +V++N++++G + G
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK----KDLVSWNTMLHGLGVHGH 396
Query: 240 LKEAIALLDEMVTKNINPDVYT------------------------------------YN 263
KEAI L M + I PD T Y
Sbjct: 397 GKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYG 456
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
LVD + G++KEA V+ M ++PNVV + +L+ + +EV+ AK +L+++
Sbjct: 457 CLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 149/342 (43%), Gaps = 3/342 (0%)
Query: 33 VVSIFNRLLRMSPTPPIIE-FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILI 91
+ IFN L + P + + K+ L K A L + G+ P I LI
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 92 NCYCHQAQITSAFSVLAKILK-KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ Y + AFS L + +P+ TFT LI C G+ + G
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++Y T+I+G K G +L IE PDV N+II S +
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
+ YS M + P + TFN LI F G K+ +++D M + + TYNI+++ F
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
K G++++ +V M QGVKPN +TY SL++ Y V K +L + V +
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDT 426
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+N +IN + + L+ +M+ + P+ +TF ++I
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMI 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 174/382 (45%), Gaps = 18/382 (4%)
Query: 134 QVQTALQFHDHVVAQGFHLNQI-SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY 192
+ Q+AL+ + + Q ++ + +Y L L Q + L + + +KP + +Y
Sbjct: 123 RWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVY 182
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
++I K L+ AF+ M ++ P V TF LI C +G+ +++ EM
Sbjct: 183 TSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMS 242
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK-PNVVTYTSLMDGYCLVSEV 310
+ TYN ++D + K G +E +VLA M++ G P+V T S++ Y +
Sbjct: 243 YLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
K + + GV P++ ++N +I K M + ++ M+ + F SL
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR--------FFSL 354
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+TYN +++ K+ ++K + +K++ QG++P+ TY L++ + G +
Sbjct: 355 -------TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLV 407
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
V++ ++ + + +IN + G L +ME+ C PD ITF T+
Sbjct: 408 VKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATM 467
Query: 491 IRALFEKGENYKAEKLLREMMA 512
I+ G ++L ++M++
Sbjct: 468 IKTYTAHGIFDAVQELEKQMIS 489
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 149/334 (44%), Gaps = 18/334 (5%)
Query: 87 LNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLI----KGLCLNGQVQTALQFH 142
+L NC Q + F V+ L +G +P +T+LI K L+ T L++
Sbjct: 151 FKVLGNCK-QPDQASLLFEVM---LSEGLKPTIDVYTSLISVYGKSELLDKAFST-LEYM 205
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
V + ++ LI+ CK+G+ ++ ++ V V YNTIID K
Sbjct: 206 KSV--SDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKA 263
Query: 203 TLVTDAFNLYSEMVA-MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ + ++ ++M+ LP V T NS+I + +++ + + PD+ T
Sbjct: 264 GMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITT 323
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+NIL+ +F K G K+ +V+ M K+ VTY +++ + + K + M
Sbjct: 324 FNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMK 383
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+GV PN +Y +++N K +V + ++ ++ ++V +T FN +I+ ++ +
Sbjct: 384 YQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLA 443
Query: 382 -----YNSLLDALCKSHHVDKAIALIKKIRDQGI 410
Y + + CK + A +IK GI
Sbjct: 444 TMKELYIQMEERKCKPDKITFA-TMIKTYTAHGI 476
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 143/345 (41%), Gaps = 16/345 (4%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAIS-LSHQLEFTGITPDIVTLNI 89
D +F +L P I + +++ K + A S L + + PD+ T +
Sbjct: 161 DQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTV 220
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI+C C + S++ ++ G +T+T+ T+I G G + ++ G
Sbjct: 221 LISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDG 280
Query: 150 FHLNQI--------SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
L + SYG N + KM + QL+ V+PD+ +N +I S K
Sbjct: 281 DSLPDVCTLNSIIGSYGNGRN-MRKMESWYSRFQLMG------VQPDITTFNILILSFGK 333
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+ ++ M + VT+N +I F G++++ + +M + + P+ T
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
Y LV+A+ K G V + +VL ++ V + + +++ Y ++ K + M
Sbjct: 394 YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQME 453
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+R P+ ++ TMI + D L +M +I +T
Sbjct: 454 ERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDIGKKRLT 498
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 111/261 (42%), Gaps = 15/261 (5%)
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
P TY L + +A+ + VM+ +G+KP + YTSL+ Y ++KA
Sbjct: 141 EPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 316 ILNSMPQ-RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
L M P+V ++ +I+ CK+ D ++ EM + +TVT+N++IDG
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
K+ + ++ +A + I D PDV T N ++ ++ +
Sbjct: 261 GKAGMF------------EEMESVLADM--IEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
G + T+ I+I K G++ + +++ ME +T+ +I
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 495 FEKGENYKAEKLLREMMARGL 515
+ G K + + R+M +G+
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGV 387
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL 87
N+ + S ++R M P I F ++ S K Y S+ +E + VT
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTY 359
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
NI+I + +I V K+ +G +PN+IT+ +L+ G V +V
Sbjct: 360 NIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVN 419
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
L+ + +IN + G +L ++E + KPD + + T+I + +
Sbjct: 420 SDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDA 479
Query: 208 AFNLYSEMVAMRI 220
L +M++ I
Sbjct: 480 VQELEKQMISSDI 492
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 24/173 (13%)
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+ LF EM + +V NTVT+ +LI GL ++ D A + K++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAG---------------DCDMAQEIFKEMVSD 45
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNA---------QEVIQDLLTKGYPVTVRTYTIMINGL 459
G+ PD+ TYNIL+DGLC+ G+L+ A ++ L KG V TYT MI+G
Sbjct: 46 GVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 105
Query: 460 CKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMA 512
CK+G +EA TL KM+++G +PD+ T+ T+IRA G+ + +L++EM +
Sbjct: 106 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
L+ EM ++ + VT+ +LI G G A + EMV+ + PD+ TYNIL+D
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 270 CKE---------GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
CK GKV++ ++ + +GVKPNVVTYT+++ G+C +A + M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
+ G P+ +YNT+I + + L EM + T+ + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 26/199 (13%)
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK--- 341
M ++G+ N VTYT+L+ G + + A+ I M GV P++ +YN +++GLCK
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 342 ------IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHV 395
V++ +LF + K + PN ++TY +++ CK
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPN---------------VVTYTTMISGFCKKGFK 111
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIM 455
++A L +K+++ G PD TYN L+ +G + E+I+++ + + TY ++
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Query: 456 INGLCKEGLFDEA-LTLLS 473
+ + +G D+ L +LS
Sbjct: 172 TD-MLHDGRLDKGFLEMLS 189
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
+ ++ ++G NT+T+TTLI+GL G A + +V+ G + ++Y L++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 166 KMGQTRASLQLLRKIEG---------KLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
K G+ +L + +G K VKP+VV Y T+I CK +A+ L+ +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
LP T+N+LI G + L+ EM + D TY ++ D
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
++ + +G N ++Y TLI GL + G + ++ +++ V PD++ YN ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 199 LCKDTL---------VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDE 249
LCK+ V D ++L+ + + P+VVT+ ++I GFC G +EA L +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
M PD TYN L+ A ++G + ++ M + TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 399 IALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
+ L +++ +G+ + TY L+ GL + G AQE+ +++++ G P + TY I+++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 459 LCKEGLFDEALTLLSKMEDN----------GCMPDAITFETIIRALFEKGENYKAEKLLR 508
LCK G ++AL + K+ED G P+ +T+ T+I +KG +A L R
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 509 EMMARGLL 516
+M G L
Sbjct: 120 KMKEDGPL 127
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 9/130 (6%)
Query: 79 GITPDIVTLNILINCYCHQAQITSA---------FSVLAKILKKGYQPNTITFTTLIKGL 129
G+ PDI+T NIL++ C ++ A + + + KG +PN +T+TT+I G
Sbjct: 46 GVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGF 105
Query: 130 CLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV 189
C G + A + G + +Y TLI + G AS +L++++ D
Sbjct: 106 CKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 165
Query: 190 VMYNTIIDSL 199
Y + D L
Sbjct: 166 STYGLVTDML 175
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/527 (21%), Positives = 228/527 (43%), Gaps = 73/527 (13%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTG--ITPDIVTLNILINCYCHQAQITSA 103
+P + ++SL K A+SL +++F I P+I IL C ++ +++
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG-EILQGC-VYERDLSTG 89
Query: 104 FSVLAKILKKG--YQPNTITFTTLI--KGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
+ A+ILK G Y N T L+ C AL+ + + ++ N S+
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKC------DALEIAEVLFSKLRVRNVFSWAA 143
Query: 160 LINGLCKMGQTRASL-------------------------------QLLRKIEGKLVKPD 188
+I C++G +L + R + G +VK
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 189 ----VVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
V + +++ D K ++ DA ++ E+ + V +N+L+ G+ G+ +EAI
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAI 259
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
L +M + + P T + + A G V+E A+ + G++ + + TSL++ Y
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C V + A+ + + M ++ +V ++N +I+G + +V++A+ + M + + +
Sbjct: 320 CKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC 375
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI----------------KKIRDQ 408
VT +L+ ++ + + C H + I L KK+ D
Sbjct: 376 VTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS 435
Query: 409 GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
++ D+ +N L+ E G A + + +G P V T+ ++I L + G DEA
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEA 495
Query: 469 LTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ +M+ +G +P+ I++ T++ + + G + +A LR+M GL
Sbjct: 496 KDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGL 542
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/470 (20%), Positives = 196/470 (41%), Gaps = 65/470 (13%)
Query: 82 PD--IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
PD V N L+ Y + A + + + K+G +P +T +T + G V+
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
Q H + G L+ I +L+N CK+G ++ + ++ + DVV +N II
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGL----IEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
+ LV DA + M ++ VT +L+ LK + + + D+
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
+ ++D + K G + +A V V+ +++ + +L+ Y +A +
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVF----DSTVEKDLILWNTLLAAYAESGLSGEALRLFYG 466
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M GV PNV ++N +I L + VDEA ++F +M I+PN +++ ++++G+ ++
Sbjct: 467 MQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG- 525
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI-------------------- 419
C ++AI ++K+++ G++P+ + +
Sbjct: 526 ----------CS----EEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 420 ----------------LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEG 463
L+D + G + A++V L P++ MI+ G
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS----NAMISAYALYG 627
Query: 464 LFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
EA+ L +E G PD IT ++ A G+ +A ++ +++++
Sbjct: 628 NLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 155/369 (42%), Gaps = 24/369 (6%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLA 108
+I + +L + + A+ L + ++ G+ P+++T N++I Q+ A +
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFL 500
Query: 109 KILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMG 168
++ G PN I++TT++ G+ NG + A+ F + G N S ++ +
Sbjct: 501 QMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL- 559
Query: 169 QTRASLQLLRKIEGKLVK-----PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
ASL + R I G +++ V + +++D K + A ++ ++
Sbjct: 560 ---ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS----KLYSE 612
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
+ N++I + + G LKEAIAL + + PD T ++ A G + +A +
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 284 -VMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
++ K+ +KP + Y ++D E KA ++ MP + +QS N K
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKT 732
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
++VD E + +N N VT SN D + K + KA L
Sbjct: 733 ELVDYLSRKLLESEPEN-SGNYVTI---------SNAYAVEGSWDEVVKMREMMKAKGLK 782
Query: 403 KKIRDQGIQ 411
KK IQ
Sbjct: 783 KKPGCSWIQ 791
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 86/141 (60%)
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M+ I P+ +T+NS+I GFC ++ +A +LD M +K +PDV T++ L++ +CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
V + M ++G+ N VTYT+L+ G+C V +++ A+ +LN M GV P+ +++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 335 MINGLCKIKMVDEALNLFAEM 355
M+ GLC K + +A + ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M+ +I P TYN ++D FCK+ +V +A +L M +G P+VVT+++L++GYC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
V+ I M +RG+ N +Y T+I+G C++ +D A +L EM + P+ +TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 370 LIDGLC-KSNIITYNSLLDALCKS--HHVD 396
++ GLC K + ++L+ L KS HH++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSEDHHLE 150
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 73/131 (55%)
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
ITYNS++D CK VD A ++ + +G PDV T++ L++G C+ R+ N E+ +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ +G TYT +I+G C+ G D A LL++M G PD ITF ++ L K E
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 500 NYKAEKLLREM 510
KA +L ++
Sbjct: 131 LRKAFAILEDL 141
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 78/134 (58%)
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
I+Y ++I+G CK + + ++L + K PDVV ++T+I+ CK V + ++ E
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M I+ + VT+ +LI+GFC VG L A LL+EM++ + PD T++ ++ C + +
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKE 130
Query: 275 VKEATNVLAVMMKQ 288
+++A +L + K
Sbjct: 131 LRKAFAILEDLQKS 144
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%)
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
P + YN++ID CK V DA + M + P VVTF++LI G+C ++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
EM + I + TY L+ FC+ G + A ++L M+ GV P+ +T+ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 307 VSEVNKAKYILNSMPQ 322
E+ KA IL + +
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M + + P +YN+MI+G CK VD+A + M K P+ VTF++LI+G CK+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK- 59
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
VD + + ++ +GI + TY L+ G C+ G L AQ+++ +
Sbjct: 60 --------------RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNE 105
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
+++ G T+ M+ GLC + +A +L ++
Sbjct: 106 MISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 79/141 (56%)
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+L+ P TIT+ ++I G C +V A + D + ++G + +++ TLING CK +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
+++ ++ + + + V Y T+I C+ + A +L +EM++ + P +TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 230 LIYGFCIVGQLKEAIALLDEM 250
++ G C +L++A A+L+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 72/136 (52%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
I P +T N +I+ +C Q ++ A +L + KG P+ +TF+TLI G C +V +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ + +G N ++Y TLI+G C++G A+ LL ++ V PD + ++ ++ L
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 200 CKDTLVTDAFNLYSEM 215
C + AF + ++
Sbjct: 126 CSKKELRKAFAILEDL 141
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 40 LLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQ 99
+LR S P I + ++ K A + + G +PD+VT + LIN YC +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 100 ITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGT 159
+ + + ++ ++G NT+T+TTLI G C G + A + +++ G + I++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 160 LINGLCKMGQTRASLQLLRKIE 181
++ GLC + R + +L ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%)
Query: 410 IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEAL 469
I P TYN ++DG C++ R+ +A+ ++ + +KG V T++ +ING CK D +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 470 TLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ +M G + + +T+ T+I + G+ A+ LL EM++ G+
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 111
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 52/110 (47%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VDD + + + +P ++ F ++ K K + + ++ GI + VT
Sbjct: 26 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
LI+ +C + +A +L +++ G P+ ITF ++ GLC +++ A
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 135
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
+P T+ TY MI+G CK+ D+A +L M GC PD +TF T+I +
Sbjct: 7 FPTTI-TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 505 KLLREMMARGLL 516
++ EM RG++
Sbjct: 66 EIFCEMHRRGIV 77
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
V+ D N +I LC+ + A L E + P+V+TF+ LI GFC G+ +EA
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
LL+ M + I PD T+NIL+ K+G+V+E ++L M +G +PN TY ++ G
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
+AK +++ M G+ P+ SY M+ GLC+ K V E + +M VP T
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
Query: 365 VTFNSLIDGLCKSN 378
+ + ++ + N
Sbjct: 378 LMWWKVVQCVVSKN 391
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 136/265 (51%), Gaps = 17/265 (6%)
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVL-AVMMKQGVKPNVVTYTSLMDGYC-LVSEV 310
K+ P Y ++++ F + E V+ + +++ + + + +LM Y L +
Sbjct: 89 KDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRI 148
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
N+A IL MP G P+ +S+N ++N L K+ DE +F +
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFV---------SAPKLGVE 199
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
ID C N L+ LC+S +++ A+ L+ + Q +P+V T++ L+ G C +G+
Sbjct: 200 IDACC------LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
+ A ++++ + + T+ I+I+GL K+G +E + LL +M+ GC P+ T++ +
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 491 IRALFEKGENYKAEKLLREMMARGL 515
+ L +K N +A++++ +M++ G+
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGM 338
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 16/267 (5%)
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
IYG + G++ AI +L M P ++N +++ E + K GV
Sbjct: 140 IYG-NLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGV 198
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
+ + L+ G C + A +L+ PQ+ PNV +++ +I G C +EA
Sbjct: 199 EIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 351 LFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGI 410
L M+ + I P+T+TFN LI GL K V++ I L+++++ +G
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKG---------------RVEEGIDLLERMKVKGC 303
Query: 411 QPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALT 470
+P+ TY ++ GL ++ R A+E++ +++ G + +Y M+ GLC+ E
Sbjct: 304 EPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Query: 471 LLSKMEDNGCMPDAITFETIIRALFEK 497
+L +M ++G +P + + +++ + K
Sbjct: 364 VLRQMVNHGFVPKTLMWWKVVQCVVSK 390
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 2/233 (0%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G P + N ++N + K G + + LIKGLC +G ++ A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
LQ D Q N +++ LI G C G+ + +LL ++E + ++PD + +N +I
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
L K V + +L M P+ T+ ++YG + EA ++ +M++ + P
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
+Y +V C+ V E VL M+ G P + + ++ C+VS+ N
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ--CVVSKNN 392
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 98 AQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL--QFHDHVVAQ---GFHL 152
+I A +L + G P++ +F + LN V L + H V+ G +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFI-----LNLLVSAKLFDEIHKIFVSAPKLGVEI 200
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ LI GLC+ G A+LQLL + + +P+V+ ++ +I C +AF L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M RI P +TFN LI G G+++E I LL+ M K P+ TY ++ +
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ EA +++ M+ G++P+ ++Y ++ G C V + ++L M G P
Sbjct: 321 KRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 1/218 (0%)
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIAL 246
P +N I++ L L + ++ + + N LI G C G L+ A+ L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 247 LDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
LDE + P+V T++ L+ FC +GK +EA +L M K+ ++P+ +T+ L+ G
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
V + +L M +G PN +Y ++ GL K EA + ++M + P+ ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 367 FNSLIDGLCKS-NIITYNSLLDALCKSHHVDKAIALIK 403
+ ++ GLC++ +++ + +L + V K + K
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWK 382
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P F IL LV K + + G+ D LNILI C + +A +
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
L + ++ +PN +TF+ LI+G C G+ + A + + + + + I++ LI+GL K
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
G+ + LL +++ K +P+ Y ++ L +A + S+M++ + PS ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 227 FNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+ ++ G C + E +L +MV P +
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMW 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ L + + A+ L + P+++T + LI +C++ + AF +L ++ K+
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
+P+TITF LI GL G+V+ + + + +G N +Y ++ GL + +
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGF 234
+++ ++ ++P + Y ++ LC+ V + + +MV +P + + ++
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ-- 385
Query: 235 CIVGQ 239
C+V +
Sbjct: 386 CVVSK 390
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 75/168 (44%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N++ + + + + P ++ F ++ + A L ++E I PD +T N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
ILI+ + ++ +L ++ KG +PN T+ ++ GL + A + +++
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTII 196
G + +SY ++ GLC+ +LR++ P +M+ ++
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 116/531 (21%), Positives = 214/531 (40%), Gaps = 85/531 (16%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+F+R+ P P + + +L + K S S +L D VT N+LI Y
Sbjct: 63 VFDRI----PQPNLFSWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYS 114
Query: 96 HQAQITSAFSVLAKILKKGYQPN--TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
+ +A +++ + N +T T++K NG V Q H V+ GF
Sbjct: 115 LSGLVGAAVKAYNTMMRD-FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE-- 171
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
SY + + L M + +K+ L + VMYN+++ L ++ DA L+
Sbjct: 172 --SYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR 229
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEG 273
M V++ ++I G G KEAI EM + + D Y + ++ A G
Sbjct: 230 GME-----KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 274 KVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
+ E + A +++ + ++ ++L+D YC ++ AK + + M Q+ NV S+
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWT 340
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF-------------------------- 367
M+ G + +EA+ +F +M I P+ T
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 368 ---------NSLID--GLCKS--------------NIITYNSLLDALCKSHHVDKAIALI 402
NSL+ G C + +++ +++ A + + I L
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV--TVRTYTIMINGLC 460
K+ G++PD T ++ G ++ Q + L+T Y + ++ Y+ MI+
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK-LMTSEYGIVPSIGHYSCMIDLFS 519
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE----NYKAEKLL 507
+ G +EA+ ++ M PDAI + T++ A KG + AE L+
Sbjct: 520 RSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLI 567
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 109/245 (44%), Gaps = 38/245 (15%)
Query: 292 PNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNL 351
P Y +++ Y L+ A+ + + +PQ PN+ S+N ++ K ++ E +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEMEST 94
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLCKSNII-----TYNSLLD------------ALCKSHH 394
F ++ ++ VT+N LI+G S ++ YN+++ + K
Sbjct: 95 FEKLPDRD----GVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSS 150
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGL----CEEGRLKNAQEVIQDLLTKGYPVTVR 450
+ ++L K+I Q I+ +Y ++ L G + +A++V L +
Sbjct: 151 SNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR----NTV 206
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
Y ++ GL G+ ++AL L ME D++++ +I+ L + G +A + REM
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 511 MARGL 515
+GL
Sbjct: 262 KVQGL 266
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 209/508 (41%), Gaps = 115/508 (22%)
Query: 100 ITSAFSVLAK-ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
I S + A+ I +K NT+T+ T+I G ++ A + D + + + +++
Sbjct: 51 IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWN 106
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
T+I+G G R L+ RK+ ++ D +NT+I K+ + +A L+ +M
Sbjct: 107 TMISGYVSCGGIRF-LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP--------------------- 257
+ V+++++I GFC G++ A+ L +M K+ +P
Sbjct: 166 ----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL 221
Query: 258 -----------D-VYTYNILVDAFCKEGKVKEATNVLAVM-----------MKQGVKPNV 294
D VY YN L+ + + G+V+ A + + ++ NV
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 295 VTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
V++ S++ Y V +V A+ + + M R + S+NTMI+G + +++A LF+E
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 355 MDCKNIVPNTVTFNSLIDGLC----------------KSNIITYNSLLDALCKSHHVDKA 398
M ++ ++N ++ G + + +++NS++ A K+ +A
Sbjct: 338 MPNRD----AHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEA 393
Query: 399 IALIKKIRDQGIQPDVRT----------------------------------YNILMDGL 424
+ L ++ +G +PD T +N L+
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMY 453
Query: 425 CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
G + ++ + ++ K V T+ MI G G EAL L M+ NG P
Sbjct: 454 SRCGEIMESRRIFDEMKLK---REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSH 510
Query: 485 ITFETIIRALFEKGENYKAEKLLREMMA 512
ITF +++ A G +A+ MM+
Sbjct: 511 ITFVSVLNACAHAGLVDEAKAQFVSMMS 538
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 170/395 (43%), Gaps = 36/395 (9%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
++V+ N +I Y + SA + ++ + +TI++ T+I G +++ A
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALF 335
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ + H S+ +++G +G +++L R K + V +N+II + K+
Sbjct: 336 SEMPNRDAH----SWNMMVSGYASVG----NVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+A +L+ M P T SL+ + L+ + + ++V K + PDV +
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVIPDVPVH 446
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
N L+ + + G++ E+ + M +K V+T+ +++ GY ++A + SM
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKS 503
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAE-MDCKNIVPNTVTFNSLIDGLCKSNIIT 381
G+ P+ ++ +++N +VDEA F M I P +
Sbjct: 504 NGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP---------------QMEH 548
Query: 382 YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
Y+SL++ ++A+ +I + +PD + L+D C V + +
Sbjct: 549 YSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDA-CRIYNNVGLAHVAAEAM 604
Query: 442 TKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
++ P + Y ++ N GL+DEA + ME
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 50/276 (18%)
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQ 330
+ G + EA ++ + + N VT+ +++ GY E+N+A+ + + MP+R +V
Sbjct: 52 RSGYIAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVV 103
Query: 331 SYNTMINGLCK---IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS---------- 377
++NTMI+G I+ ++EA LF EM + ++ ++N++I G K+
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLF 159
Query: 378 ------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
N +++++++ C++ VD A+ L +K+ + P L+ GL + RL
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLS 215
Query: 432 NAQEVIQDL--LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM-----EDNG----- 479
A V+ L G V Y +I G + G + A L ++ +D+G
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 480 --CMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
C + +++ ++I+A + G+ A L +M R
Sbjct: 276 RFC-KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 133/331 (40%), Gaps = 50/331 (15%)
Query: 34 VSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINC 93
V + +P + + I+ + K K Y A+ L ++ G PD TL L+
Sbjct: 359 VELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL-- 416
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLN 153
SA + L L+ G Q + I T+I + +
Sbjct: 417 --------SASTGLVN-LRLGMQMHQIVVKTVIPDVPV---------------------- 445
Query: 154 QISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYS 213
+ LI + G+ S ++ +++ +K +V+ +N +I ++A NL+
Sbjct: 446 ---HNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFG 499
Query: 214 EMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT-KNINPDVYTYNILVDAFCKE 272
M + I PS +TF S++ G + EA A M++ I P + Y+ LV+ +
Sbjct: 500 SMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQ 559
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ---RGVTPNV 329
G+ +EA ++ M +P+ + +L+D + + V A +M + TP V
Sbjct: 560 GQFEEAMYIITSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYV 616
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
YN + + + DEA + M+ K I
Sbjct: 617 LLYNMYAD----MGLWDEASQVRMNMESKRI 643
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 24/301 (7%)
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN--INPDVYTYNILV 266
F L E + + P+V + LI Q ++A L EM+ + +N +VYT LV
Sbjct: 137 FELLREQLWYK--PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT--ALV 192
Query: 267 DAFCKEGKVKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
A+ + G+ A +L M +P+V TY+ L+ + V +K + +L+ M ++G+
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
PN +YNT+I+ K KM F EM+ + L + CK + T NS
Sbjct: 253 RPNTITYNTLIDAYGKAKM-------FVEME-------STLIQMLGEDDCKPDSWTMNST 298
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
L A + ++ +K + GI+P++RT+NIL+D + G K V++ + Y
Sbjct: 299 LRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHY 358
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
T+ TY ++I+ + G + L M+ P +T +++RA G KA+K
Sbjct: 359 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADK 415
Query: 506 L 506
+
Sbjct: 416 I 416
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 161/381 (42%), Gaps = 52/381 (13%)
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y+PN + LI L Q + A + ++ +G +N Y L++ + G+ A+
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 175 QLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
LL +++ +PDV Y+ +I S + +L S+M I P+ +T+N+LI
Sbjct: 206 TLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 234 FCIVGQLKEAIALLDEMVTKN-INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
+ E + L +M+ ++ PD +T N + AF G+++ N G++P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
N+ T+ L+D Y K ++ M + + + +YN +I+ + + + LF
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
M + I P+ VT LC SL+ A ++ DK +++ I + I+
Sbjct: 386 RLMQSERIFPSCVT-------LC--------SLVRAYGRASKADKIGGVLRFIENSDIRL 430
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
D+ +N L+D GR++ F E +L
Sbjct: 431 DLVFFNCLVDAY---GRMEK--------------------------------FAEMKGVL 455
Query: 473 SKMEDNGCMPDAITFETIIRA 493
ME G PD IT+ T+++A
Sbjct: 456 ELMEKKGFKPDKITYRTMVKA 476
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 165/368 (44%), Gaps = 20/368 (5%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + K++ L K K A L ++ G + L++ Y + +AF++
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 107 LAKILKKGY--QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
L + +K + QP+ T++ LIK + QG N I+Y TLI+
Sbjct: 208 LER-MKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 266
Query: 165 CKMGQTRASLQLLRKIEGKLV--------KPDVVMYNTIIDSLCKDTLVTDAFNLYSEMV 216
K ++ ++E L+ KPD N+ + + + + N Y +
Sbjct: 267 GKA-------KMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQ 319
Query: 217 AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
+ I P++ TFN L+ + G K+ A+++ M + + + TYN+++DAF + G +K
Sbjct: 320 SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLK 379
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
+ + +M + + P+ VT SL+ Y S+ +K +L + + ++ +N ++
Sbjct: 380 QMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLV 439
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
+ +++ E + M+ K P+ +T+ +++ S + T+ L + +S V
Sbjct: 440 DAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVES--VG 497
Query: 397 KAIALIKK 404
+A ++KK
Sbjct: 498 EAQVVVKK 505
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/479 (20%), Positives = 194/479 (40%), Gaps = 96/479 (20%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D ++ +++ Y + A V +++ G N T ++ +K G+V+ FH
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
V+ GF N TL G R + R++ ++ +PDV+ + ++ + K+
Sbjct: 187 GVVITHGFEWNHFISSTLAY---LYGVNREPVDA-RRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
L +A L+ M K + PD T+
Sbjct: 243 DLYEEALGLFYAM----------------------------------HRGKGLVPDGSTF 268
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++ A ++K+ + ++ G+ NVV +SL+D Y V +A+ + N M +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI---------------------- 360
+ N S++ ++ G C+ ++A+ +F EM+ K++
Sbjct: 329 K----NSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEI 384
Query: 361 ---------VPNTVTFNSLIDGLCKS----------------NIITYNSLLDALCKSHHV 395
N + ++LID KS N+IT+N++L AL ++
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Query: 396 DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT--YT 453
++A++ + +GI+PD ++ ++ G + + L+ K Y + T Y+
Sbjct: 445 EEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV-LMAKSYGIKPGTEHYS 503
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYK-AEKLLREMM 511
MI+ L + GLF+EA LL + E C DA + ++ + + AE++ + MM
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAE---CRNDASLWGVLLGPCAANADASRVAERIAKRMM 559
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 161/349 (46%), Gaps = 22/349 (6%)
Query: 32 DVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLE-FTGITPDIVTLNIL 90
D +F+ + P P +I + +L++ K Y A+ L + + G+ PD T +
Sbjct: 216 DARRVFDEM----PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ + ++ + K++ G N + ++L+ G V+ A Q + + +
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK-- 329
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N +S+ L+ G C+ G+ ++++ R++E K D+ + T++ + V
Sbjct: 330 --NSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKE 383
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFC 270
++ + V +V+ ++LI + G + A + +M +N+ T+N ++ A
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM----ITWNAMLSALA 439
Query: 271 KEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK-YILNSMPQRGVTPNV 329
+ G+ +EA + M+K+G+KP+ +++ +++ V++ + Y + G+ P
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGT 499
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
+ Y+ MI+ L + + +EA NL +C+ N + ++ G C +N
Sbjct: 500 EHYSCMIDLLGRAGLFEEAENLLERAECR----NDASLWGVLLGPCAAN 544
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/436 (18%), Positives = 175/436 (40%), Gaps = 96/436 (22%)
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS----------------LCKDTLVTD 207
LCK+GQ ++++L + +Y +++ + + K L TD
Sbjct: 36 LCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETD 95
Query: 208 A------FNLY----------SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+LY + R + +++ S++ G+ + +A+ + EMV
Sbjct: 96 RNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV 155
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
+ ++ + +T + V A + G+V+ V++ G + N ++L Y + E
Sbjct: 156 SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMD-CKNIVPNTVTF--- 367
A+ + + MP+ P+V + +++ K + +EAL LF M K +VP+ TF
Sbjct: 216 DARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 368 --------------------------------NSLID----------------GLCKSNI 379
+SL+D G+ K N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
+++++LL C++ +KAI + +++ ++ D+ + ++ ++ +E+
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ +G V + +I+ K G D A + SKM + + IT+ ++ AL + G
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS----IRNMITWNAMLSALAQNGR 443
Query: 500 NYKAEKLLREMMARGL 515
+A +M+ +G+
Sbjct: 444 GEEAVSFFNDMVKKGI 459
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 153/337 (45%), Gaps = 16/337 (4%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
++ R+L S F +L + + + + Q+ G D+ +N LIN Y
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 96 HQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQI 155
+T F + + + +P+ +++ ++IKG G++ AL + + N I
Sbjct: 162 ----VTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAI 213
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
S+ T+I+G + + +LQL +++ V+PD V + + + + ++S +
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
RI V LI + G+++EA+ + + K++ + L+ + G
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ----AWTALISGYAYHGHG 329
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR-GVTPNVQSYNT 334
+EA + M K G+KPNV+T+T+++ V + K I SM + + P ++ Y
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+++ L + ++DEA EM K PN V + +L+
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMPLK---PNAVIWGALL 423
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 157/371 (42%), Gaps = 27/371 (7%)
Query: 74 QLEFTGI-TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLN 132
Q+ F G PD N++I + + + + ++L N TF +L+K
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 133 GQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY 192
+ Q H + G+ + + +LIN G + + L +I +PD V +
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP----EPDDVSW 184
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
N++I K + A L+ +M + +++ ++I G+ KEA+ L EM
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
++ PD + + A + G +++ + + + K ++ + V L+D Y E+ +
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
A + ++ ++ +VQ++ +I+G EA++ F EM I PN +TF +++
Sbjct: 301 ALEVFKNIKKK----SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKN 432
+ ++ L+ RD ++P + Y ++D L G L
Sbjct: 357 ACSYTGLVEEGKLI--------------FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 433 AQEVIQDLLTK 443
A+ IQ++ K
Sbjct: 403 AKRFIQEMPLK 413
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 154/337 (45%), Gaps = 29/337 (8%)
Query: 177 LRKIEGKLVKPDVVMYNTIID---SLCKDTLVTDAFNLYSEMVAMRI-LPSVVTFNSLIY 232
L++I +++K ++ + I S C + +D F Y+++V P +N +I
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSD-FLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
GF + + ++ L M+ + + YT+ L+ A +E T + A + K G +
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
+V SL++ Y + A + + +P+ P+ S+N++I G K +D AL LF
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGYVKAGKMDIALTLF 204
Query: 353 AEMDCKNIVPNTVTFNSLIDG-LCKSNIITYNSLLDALCKSHHVDKAIALIKKIR----D 407
+M KN + T + + + K + ++ + ++ + +V A AL + +
Sbjct: 205 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 264
Query: 408 QG-----------IQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMI 456
QG I+ D +L+D + G ++ A EV +++ K +V+ +T +I
Sbjct: 265 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK----SVQAWTALI 320
Query: 457 NGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+G G EA++ +M+ G P+ ITF ++ A
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/436 (21%), Positives = 187/436 (42%), Gaps = 33/436 (7%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D+ +++ + + A ++ G QPN T++ ++ + Q H
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 143 DHVVAQGFHLNQISYGTLINGL--CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
+ GF + L++ C + AS ++ G +V P+VV + T+I L
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS-----RVFGAMVSPNVVSWTTLILGLV 403
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
V D F L EMV + P+VVT + ++ + ++ + + ++ ++++ ++
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
N LVDA+ KV A NV+ M ++ + +TYTSL+ + + + A ++N M
Sbjct: 464 VGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK---- 376
G+ + S I+ + ++ +L NSL+D K
Sbjct: 520 YGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSL 579
Query: 377 ------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGL 424
+++++N L+ L + + A++ +++R + +PD T+ IL+
Sbjct: 580 EDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA- 638
Query: 425 CEEGRLKNAQEVIQDLLTKGYPV--TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
C GRL + ++ K Y + V Y ++ L + G +EA ++ M P
Sbjct: 639 CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMH---LKP 695
Query: 483 DAITFETIIRALFEKG 498
+A+ F+T++RA +G
Sbjct: 696 NAMIFKTLLRACRYRG 711
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 172/452 (38%), Gaps = 108/452 (23%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+ ++I+ + + SA S+ +++ G PN TF+++++ + + H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
V+ GF N + +L + K GQ + + +L ++ D + + +I SL
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGAR 204
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG------------------------- 238
+A YSEMV + P+ TF L+ +G
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTS 264
Query: 239 ---------QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
++++A+ +L+ + DV+ + +V F + + KEA M G
Sbjct: 265 LVDFYSQFSKMEDAVRVLN----SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 290 VKPNVVTYT-----------------------------------SLMDGY--CLVSEVNK 312
++PN TY+ +L+D Y C SEV +
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV-E 379
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
A + +M V+PNV S+ T+I GL V + L EM + + PN VT + ++
Sbjct: 380 ASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR 435
Query: 373 GLCK--------------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
K ++ NSL+DA S VD A +I+ ++ +
Sbjct: 436 ACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR---- 491
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
D TY L+ E G+ + A VI + G
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDG 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 191/464 (41%), Gaps = 67/464 (14%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D ++ ++I+ + A ++++K G PN TF L+ G ++ H
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIH 247
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+++ +G LN + +L++ + + ++++L + DV ++ +++ ++
Sbjct: 248 SNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG----EQDVFLWTSVVSGFVRN 303
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+A + EM ++ + P+ T+++++ V L + + +
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 263 NILVDAF--CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
N LVD + C +V EA+ V M V PNVV++T+L+ G V +L M
Sbjct: 364 NALVDMYMKCSASEV-EASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEM 418
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS--- 377
+R V PNV + + ++ K++ V L + A + +++ V NSL+D S
Sbjct: 419 VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 378 -------------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD----------- 413
+ ITY SL+ + + A+++I + GI+ D
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 414 ------------------------VRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
N L+D + G L++A++V +++ T V
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATP----DV 594
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
++ +++GL G AL+ +M PD++TF ++ A
Sbjct: 595 VSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 154/364 (42%), Gaps = 57/364 (15%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
++P++V+ LI + F +L +++K+ +PN +T + +++ V+ L
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ H ++ L R ++G++ V+ N+++D+
Sbjct: 448 EIHAYL------------------------------LRRHVDGEM-----VVGNSLVDAY 472
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
V A+N+ M +T+ SL+ F +G+ + A+++++ M I D
Sbjct: 473 ASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQ 528
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
+ + A G ++ ++ +K G SL+D Y + AK +
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
+ TP+V S+N +++GL + AL+ F EM K P++VTF L+ C +
Sbjct: 589 I----ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA-CSNGR 643
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
+T L + ++KKI + I+P V Y L+ L GRL+ A V++
Sbjct: 644 LTDLGL-----------EYFQVMKKIYN--IEPQVEHYVHLVGILGRAGRLEEATGVVET 690
Query: 440 LLTK 443
+ K
Sbjct: 691 MHLK 694
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/391 (20%), Positives = 146/391 (37%), Gaps = 107/391 (27%)
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI------ 231
RK+ ++ V + +I + K A +L+ EM+A P+ TF+S++
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 232 ----YG-------------------------FCIVGQLKEAIALLDEMVTKNINPDVYTY 262
YG + GQ KEA L + N D ++
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISW 193
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY------------------------- 297
+++ + K +EA + M+K GV PN T+
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVR 253
Query: 298 ---------TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
TSL+D Y S++ A +LNS ++ +V + ++++G + EA
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ----DVFLWTSVVSGFVRNLRAKEA 309
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQ 408
+ F EM + PN T+++++ +LC + +++ K+I Q
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAIL----------------SLCSA---VRSLDFGKQIHSQ 350
Query: 409 ----GIQPDVRTYNILMDGL--CEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
G + N L+D C ++ A V +++ V ++T +I GL
Sbjct: 351 TIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSP----NVVSWTTLILGLVDH 405
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
G + LL +M P+ +T ++RA
Sbjct: 406 GFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 132/332 (39%), Gaps = 76/332 (22%)
Query: 38 NRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL---------- 87
+R+ +P ++ + ++ LV L ++ + P++VTL
Sbjct: 381 SRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL 440
Query: 88 -------------------------NILINCYCHQAQITSAFSVLAKILKKGYQPNTITF 122
N L++ Y ++ A++V+ + ++ + IT+
Sbjct: 441 RHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITY 496
Query: 123 TTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISY------------------------- 157
T+L+ G+ + AL +++ G ++Q+S
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 158 ------GTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+++N L M SL+ +K+ ++ PDVV +N ++ L + ++ A +
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSA 616
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK--NINPDVYTYNILVDAF 269
+ EM P VTF L+ C G+L + +++ K NI P V Y LV
Sbjct: 617 FEEMRMKETEPDSVTFLILLSA-CSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGIL 675
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+ G+++EAT V+ M +KPN + + +L+
Sbjct: 676 GRAGRLEEATGVVETMH---LKPNAMIFKTLL 704
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 24/283 (8%)
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVT 252
N ++ K + +A L+ EM +V + +I F + A++L +EM+
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
+P+ +T++ +V + + V ++K G + N V +SL D Y + +
Sbjct: 118 SGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE 177
Query: 313 AKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
A + +S+ + S+ MI+ L + EAL ++EM + PN TF L+
Sbjct: 178 ACELFSSLQN----ADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 373 -----GL-----CKSNIITYNSLLDALCKSHHVDKAIALIK-----KIRDQGIQPDVRTY 417
GL SNII L+ + K+ VD K ++ + + DV +
Sbjct: 234 ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 418 NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
++ G R K A ++ + G TY+ +++ LC
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILS-LC 335
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 45/423 (10%)
Query: 87 LNILINCYCH---QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
NI+I H Q S SV ++ P+ TF L+ + + H
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
++ G + +L+N G R++ ++ K D+ +N+++++ K
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK----DLPAWNSVVNAYAKAG 142
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNIN-----PD 258
L+ DA L+ EM +V++++ LI G+ + G+ KEA+ L EM N P+
Sbjct: 143 LIDDARKLFDEMPER----NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPN 198
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+T + ++ A + G +++ V A + K V+ ++V T+L+D Y + +AK + N
Sbjct: 199 EFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGLCKS 377
++ G +V++Y+ MI L + DE LF+EM NI PN+VTF ++
Sbjct: 259 AL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR 315
Query: 378 NIIT---------------------YNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+I Y ++D +S + +A + I + ++PDV
Sbjct: 316 GLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM---PMEPDVLI 372
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
+ L+ G G +K + ++ L+ P+ Y ++ N K G + E + +ME
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELD-PMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 431
Query: 477 DNG 479
G
Sbjct: 432 VKG 434
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 2/330 (0%)
Query: 36 IFNRLLR-MSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCY 94
+ N LL M P+ +I + + K K + L ++ GI PD T +I+C
Sbjct: 161 VLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCA 220
Query: 95 CHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
A K+ G +P+ +T +I G V AL +D + + ++
Sbjct: 221 RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA 280
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+++ TLI G L + +++ VKP++V+YN +IDS+ + A +Y +
Sbjct: 281 VTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKD 340
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
++ P+ T+ +L+ + +A+A+ EM K ++ V YN L+
Sbjct: 341 LITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRY 400
Query: 275 VKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYN 333
V EA + M + P+ T++SL+ Y V++A+ L M + G P +
Sbjct: 401 VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLT 460
Query: 334 TMINGLCKIKMVDEALNLFAEMDCKNIVPN 363
++I K K VD+ + F ++ I P+
Sbjct: 461 SVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 16/312 (5%)
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
S +L ++ + +KPD + TII ++ + A + +M + P VT ++I
Sbjct: 194 SEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMID 253
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
+ G + A++L D T+ D T++ L+ + G N+ M GVKP
Sbjct: 254 AYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
N+V Y L+D +AK I + G TPN +Y ++ + + D+AL ++
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIY 373
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD-QGIQ 411
EM K + SL +I YN+LL + +VD+A + + +++ +
Sbjct: 374 REMKEKGL--------SL-------TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 412 PDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
PD T++ L+ GR+ A+ + + G+ T+ T +I K D+ +
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478
Query: 472 LSKMEDNGCMPD 483
++ + G PD
Sbjct: 479 FDQVLELGITPD 490
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 125/299 (41%), Gaps = 16/299 (5%)
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
M+ V+ +N + F L+++ L DEM+ + I PD T+ ++ + G K
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKR 228
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
A M G +P+ VT +++D Y V+ A + + + +++T+I
Sbjct: 229 AVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIR 288
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
D LN++ EM + PN ++ YN L+D++ ++ +
Sbjct: 289 IYGVSGNYDGCLNIYEEMKALGVKPN---------------LVIYNRLIDSMGRAKRPWQ 333
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A + K + G P+ TY L+ +A + +++ KG +TV Y +++
Sbjct: 334 AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS 393
Query: 458 GLCKEGLFDEALTLLSKMED-NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
DEA + M++ C PD+ TF ++I G +AE L +M G
Sbjct: 394 MCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGF 452
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 365 VTFNSLIDGLCKS-NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDG 423
+ N+L++ + S +I YN + KS ++K+ L ++ ++GI+PD T+ ++
Sbjct: 160 LVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 424 LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
+ G K A E + + + G T MI+ + G D AL+L + D
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID 279
Query: 484 AITFETIIRALFEKGENYKAEKLLREMMARGL 515
A+TF T+IR G + EM A G+
Sbjct: 280 AVTFSTLIRIYGVSGNYDGCLNIYEEMKALGV 311
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 192/451 (42%), Gaps = 34/451 (7%)
Query: 69 ISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKG 128
+S +++L PD+V N +I + + +LK+G P++ TF L+ G
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 129 LCLNG-QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
L +G + + H HVV G N + N L KM + + R + + K
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLY----VQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
DV +N +I + ++ L EM + P+ VT L+ C + K+ +
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL-LLVLSACSKVKDKDLCKRV 258
Query: 248 DEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCL 306
E V++ P + N LV+A+ G++ A + M + +V+++TS++ GY
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVKGYVE 314
Query: 307 VSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ A+ + MP R + S+ MI+G + +E+L +F EM ++P+ T
Sbjct: 315 RGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFT 370
Query: 367 FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
S++ + + ++DK I+ DV N L+D +
Sbjct: 371 MVSVLTACAHLGSLEIGEWIKT-----YIDK----------NKIKNDVVVGNALIDMYFK 415
Query: 427 EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAIT 486
G + AQ+V D+ + T+T M+ GL G EA+ + +M+D PD IT
Sbjct: 416 CGCSEKAQKVFHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 487 FETIIRALFEKGENYKAEKLLREMMARGLLE 517
+ ++ A G +A K +M + +E
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/518 (20%), Positives = 212/518 (40%), Gaps = 70/518 (13%)
Query: 34 VSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINC 93
VS +L P P ++ + ++ K+ + L + G+TPD T L+N
Sbjct: 84 VSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNG 143
Query: 94 YCHQAQITSAFSVL-AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
+ L ++K G N L+K L G + A D +
Sbjct: 144 LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE---- 199
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS--------LCK--- 201
+ S+ +I+G +M + S++LL ++E LV P V ++ + LCK
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 202 --------------DTLVTDAFNLYSEM-VAMRILPS-----VVTFNSLIYGFCIVGQLK 241
+ + +A+ EM +A+RI S V+++ S++ G+ G LK
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
A D+M + D ++ I++D + + G E+ + M G+ P+ T S++
Sbjct: 320 LARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVL 375
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
+ + ++I + + + +V N +I+ K ++A +F +MD
Sbjct: 376 TACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD----- 430
Query: 362 PNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
+ + T+ +++ L + +AI + +++D IQPD TY ++
Sbjct: 431 --------------QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVL 476
Query: 422 DGLCEEGRLKNAQEVIQDLLT--KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
G + A++ + + + P V Y M++ L + GL EA +L KM N
Sbjct: 477 SACNHSGMVDQARKFFAKMRSDHRIEPSLVH-YGCMVDMLGRAGLVKEAYEILRKMPMN- 534
Query: 480 CMPDAITFETIIRALFEKGENYKAEKLLREMMARGLLE 517
P++I + ++ A ++ + E+ A+ +LE
Sbjct: 535 --PNSIVWGALLGA-----SRLHNDEPMAELAAKKILE 565
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/507 (18%), Positives = 203/507 (40%), Gaps = 82/507 (16%)
Query: 49 IIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTL--------------------- 87
+ + +++ +MK Y +I L ++E ++P VTL
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 88 --------------NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
N L+N Y ++ + +I + + I++T+++KG G
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEM----DIAVRIFRSMKARDVISWTSIVKGYVERG 316
Query: 134 QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYN 193
++ A + D + + ++IS+ +I+G + G SL++ R+++ + PD
Sbjct: 317 NLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 194 TIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK 253
+++ + + + + + +I VV N+LI + G ++A + +M +
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
D +T+ +V G+ +EA V M ++P+ +TY ++ V++A
Sbjct: 433 ----DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA 488
Query: 314 KYILNSM-PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID 372
+ M + P++ Y M++ L + +V EA + +M + PN++ + +L+
Sbjct: 489 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVWGALLG 545
Query: 373 GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPD-VRTYNILMDGLCEEGRLK 431
H D+ +A + + ++PD Y +L + R K
Sbjct: 546 A-----------------SRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWK 588
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLS-----KMEDNGCMPDAIT 486
+ +EV + ++ T I +NG E + + L S K+E+ + T
Sbjct: 589 DLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEE---LAQEST 645
Query: 487 FETII----RALFEKGENYK-AEKLLR 508
F + LFE G+ Y A + +R
Sbjct: 646 FAAYLPDTSELLFEAGDAYSVANRFVR 672
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 200/470 (42%), Gaps = 57/470 (12%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISL-SHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
P + I+ ++ + K YS +ISL + + + I P++V+ N +IN +C + + A
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALE 237
Query: 106 VLAKILKKG-YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
V IL + P+++T+ L KGL G++ A ++++G + Y LI G
Sbjct: 238 VYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGY 297
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
+G +++ +++ K D ++ T ++ + +A Y ++ +
Sbjct: 298 LDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHP 357
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN-----ILVDAFCKEGKVKEAT 279
T N L+ F G+ EA AL +EM+ + P++ + N I+V+ K G+ EA
Sbjct: 358 PTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAI 417
Query: 280 NVL-AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
N V K KP V+ Y GYC ++
Sbjct: 418 NTFKKVGSKVTSKPFVMDYL----GYC----------------------------NIVTR 445
Query: 339 LCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKA 398
C+ M+ EA FAE +++ ++ ++ +++DA K+ +D A
Sbjct: 446 FCEQGMLTEAERFFAEGVSRSL---------------PADAPSHRAMIDAYLKAERIDDA 490
Query: 399 IALIKKIRDQGIQPDVRTYNILMDG-LCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
+ ++ ++ D ++ V + + G L + G+L + EV+ + + Y +++
Sbjct: 491 VKMLDRMVDVNLR-VVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVR 549
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
GLC D+A ++ +M + + E II + G + EK+L
Sbjct: 550 GLCDGDALDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKIL 599
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 17/187 (9%)
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEM-DCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
P V + N +I + + K E+++LF NIVPN +++YN +
Sbjct: 178 PTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPN---------------VVSYNQI 222
Query: 386 LDALCKSHHVDKAIALIKKI-RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
++A C +VD+A+ + + I + P TY L GL + GR+ +A +++++L+KG
Sbjct: 223 INAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKG 282
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
Y +I G G FD+A+ +++ + D I T + FEKG + +A
Sbjct: 283 QAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAM 342
Query: 505 KLLREMM 511
+ R ++
Sbjct: 343 ESYRSLL 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKI-RDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+ + T N+++ A+ ++ ++I+L + + I P+V +YN +++ C+EG + A
Sbjct: 176 TRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 434 QEVIQDLLTKG--YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
EV + +L P +V TY + GL + G +A +LL +M G D+ + +I
Sbjct: 236 LEVYRHILANAPFAPSSV-TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLI 294
Query: 492 RALFEKGENYKAEKLLREMMAR 513
R + G+ KA + E+ ++
Sbjct: 295 RGYLDLGDFDKAVEFFDELKSK 316
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/486 (20%), Positives = 204/486 (41%), Gaps = 52/486 (10%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+DV+ ++ + R P F ++ S + I +E G D N+
Sbjct: 87 ANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVEKLGFFKDPYVRNV 141
Query: 90 LINCYCHQAQITSAFSVLAKI-LKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+++ Y + SA V +I +KG N +I G G + A + D +
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNV-----MISGYWKWGNKEEACKLFDMMPEN 196
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ +S+ +I G K+ L+ RK ++ + VV +N ++ ++ DA
Sbjct: 197 ----DVVSWTVMITGFAKV----KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQ---LKEAIALLDEMVTKNINPDVYTYNIL 265
L+++M+ + + P+ T+ +I + + L+DE K + + + L
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE---KRVRLNCFVKTAL 305
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+D K ++ A + + G + N+VT+ +++ GY + +++ A+ + ++MP+R
Sbjct: 306 LDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR-- 360
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID-GLCKSNIITYNS 384
NV S+N++I G A+ F +M ID G K + +T S
Sbjct: 361 --NVVSWNSLIAGYAHNGQAALAIEFFEDM---------------IDYGDSKPDEVTMIS 403
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
+L A ++ ++ IR I+ + Y L+ G L A+ V ++ +
Sbjct: 404 VLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER- 462
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
V +Y + G E L LLSKM+D G PD +T+ +++ A G + +
Sbjct: 463 ---DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQ 519
Query: 505 KLLREM 510
++ + +
Sbjct: 520 RIFKSI 525
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 160/401 (39%), Gaps = 64/401 (15%)
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
Q H ++ Q + + I C + RA R I + P+V + N++
Sbjct: 24 QIHAQLIVFNSLPRQSYWASRIISCCT--RLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG---FCIVGQ-LKEAIALLDEMVTKNI 255
K + D LY + I+P +F +I F I+ Q L E + + +N+
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNV 141
Query: 256 NPDVYT----------------------YNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
D+Y +N+++ + K G +EA + +M + +
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----D 197
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFA 353
VV++T ++ G+ V ++ A+ + MP++ V S+N M++G + ++AL LF
Sbjct: 198 VVSWTVMITGFAKVKDLENARKYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFN 253
Query: 354 EMDCKNIVPNTVTF------------NSLIDGLCK--------SNIITYNSLLDALCKSH 393
+M + PN T+ SL L K N +LLD K
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 394 HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYT 453
+ A + ++ G Q ++ T+N ++ G G + +A+++ + + V ++
Sbjct: 314 DIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NVVSWN 366
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNG-CMPDAITFETIIRA 493
+I G G A+ M D G PD +T +++ A
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA 407
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 186/465 (40%), Gaps = 46/465 (9%)
Query: 59 LVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPN 118
L M+ + A + +E GI P+IVT N L+ Y + + A +L +KG++PN
Sbjct: 194 LGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPN 253
Query: 119 TITFTTLIKGLCLNGQVQTALQFH----------------------DHVVAQGFHLNQIS 156
IT++T + AL+F + V + F + +I
Sbjct: 254 PITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENF-IGRIC 312
Query: 157 YGTLINGLCKM-GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
Y + L K T L+LL ++ V+P + +I + ++ LY +
Sbjct: 313 YQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRI 372
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY-------NILVDA 268
S+ N LI+ + A+ + ++++ + P+ +Y NIL+ A
Sbjct: 373 RERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSA 432
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
K G + +L M +G+KP + +++ SE A I +M G P
Sbjct: 433 ASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPT 492
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
V SY +++ L K K+ DEA ++ M I PN + Y ++
Sbjct: 493 VISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPN---------------LYAYTTMASV 537
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
L + L+K++ +GI+P V T+N ++ G G A E + ++
Sbjct: 538 LTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPN 597
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
TY ++I L + A L K ++ G + ++ ++++
Sbjct: 598 EITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/449 (21%), Positives = 179/449 (39%), Gaps = 57/449 (12%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
I P++ N L+ A +L + ++G PN +T+ TL+ G+ AL
Sbjct: 183 IGPNLFIYNSLLGA---MRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKAL 239
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDV---------- 189
D +GF N I+Y T + +M +L+ ++ K K ++
Sbjct: 240 GILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEF 299
Query: 190 --VMYNTIIDSLC----------KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG---- 233
V I +C D T L + M + + PS LI+
Sbjct: 300 EFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTRE 359
Query: 234 -FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
IVG KE + E ++ + N L+ K K A + ++ +G +P
Sbjct: 360 EHYIVG--KELYKRIRERFSE---ISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEP 414
Query: 293 NVVTYTSLMDGY-CLVSEVNKAK------YILNSMPQRGVTPNVQSYNTMINGLCKIKMV 345
N ++Y ++ + L+S +K +LN M +G+ P + +N ++ K
Sbjct: 415 NNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASET 474
Query: 346 DEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
A+ +F M +D K +I+Y +LL AL K D+A + +
Sbjct: 475 TAAIQIFKAM---------------VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHM 519
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
GI+P++ Y + L + + +++++ +KG +V T+ +I+G + GL
Sbjct: 520 IKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLS 579
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRAL 494
A +M+ P+ IT+E +I AL
Sbjct: 580 GVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 78/166 (46%)
Query: 33 VVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILIN 92
+ IF ++ P +I +G +L++L K K Y A + + + GI P++ + +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 93 CYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHL 152
Q + ++L ++ KG +P+ +TF +I G NG A ++ + ++
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEP 596
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
N+I+Y LI L + R + +L K + + +K Y+ ++ S
Sbjct: 597 NEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Query: 34 VSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINC 93
V + N++ P + +L + K + AI + + G P +++ L++
Sbjct: 443 VRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSA 502
Query: 94 YCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL--QFHDHVVAQGFH 151
AF V ++K G +PN +TT+ L GQ + L + ++G
Sbjct: 503 LEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS--VLTGQQKFNLLDTLLKEMASKGIE 560
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
+ +++ +I+G + G + + + +++ + V+P+ + Y +I++L D A+ L
Sbjct: 561 PSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Query: 212 Y 212
+
Sbjct: 621 H 621
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/140 (19%), Positives = 62/140 (44%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ ++N ++++ P + + + + L + ++ +L ++ GI P +VT N +
Sbjct: 510 DEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAV 569
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ A+ ++ + +PN IT+ LI+ L + + + A + H +G
Sbjct: 570 ISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGL 629
Query: 151 HLNQISYGTLINGLCKMGQT 170
L+ Y ++ G T
Sbjct: 630 KLSSKPYDAVVKSAETYGAT 649
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 135/270 (50%), Gaps = 21/270 (7%)
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
+AI D M P + L+ A C+ G +++A + + K+ +V + ++
Sbjct: 207 QAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM-LASKKLFPVDVEGFNVIL 265
Query: 302 DGYC-LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNI 360
+G+C + ++V +AK I M +TPN SY+ MI+ K+ + ++L L+ EM + +
Sbjct: 266 NGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL 325
Query: 361 VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
P I YNSL+ L + D+A+ L+KK+ ++G++PD TYN +
Sbjct: 326 APG---------------IEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
+ LCE G+L A+ V+ ++++ TV T+ + + F++ L +L +M+ +
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN----FEKTLEVLGQMKISDL 426
Query: 481 MPDAITFETIIRALFEKGENYKAEKLLREM 510
P TF I+ LF+ + A K+ EM
Sbjct: 427 GPTEETFLLILGKLFKGKQPENALKIWAEM 456
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 139/291 (47%), Gaps = 21/291 (7%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK-DTLVTDAFNLYSE 214
++ L+ LC+ G + + + + KL DV +N I++ C T VT+A ++ E
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFMLASK-KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWRE 284
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M I P+ +++ +I F VG L +++ L DEM + + P + YN LV +E
Sbjct: 285 MGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDC 344
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
EA ++ + ++G+KP+ VTY S++ C +++ A+ +L +M ++P V +++
Sbjct: 345 FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA 404
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
+ + ++ L + +M ++ P TF L+ +L L K
Sbjct: 405 FLEAVN----FEKTLEVLGQMKISDLGPTEETF--LL-------------ILGKLFKGKQ 445
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
+ A+ + ++ I + Y + GL G L+ A+E+ ++ +KG+
Sbjct: 446 PENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 136/303 (44%), Gaps = 8/303 (2%)
Query: 28 HNVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITP-DIVT 86
++ + F+ + + TP F +L +L + H A L + P D+
Sbjct: 203 NDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEF--MLASKKLFPVDVEG 260
Query: 87 LNILINCYCH-QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHV 145
N+++N +C+ +T A + ++ PN +++ +I G + +L+ +D +
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
+G Y +L+ L + +++L++K+ + +KPD V YN++I LC+ +
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
A N+ + M++ + P+V TF + F ++ + +L +M ++ P T+ ++
Sbjct: 381 DVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLI 436
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
+ K + + A + A M + + N Y + + G + KA+ I + M +G
Sbjct: 437 LGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Query: 326 TPN 328
N
Sbjct: 497 VGN 499
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLC-LNGQVQTAL 139
TP L+ C I A + KK + + F ++ G C + V A
Sbjct: 221 TPYDEAFQGLLCALCRHGHIEKAEEFMLAS-KKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
+ + N+ SY +I+ K+G SL+L +++ + + P + +YN+++ L
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
++ +A L ++ + P VT+NS+I C G+L A +L M+++N++P V
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
T++ AF + ++ VL M + P T+ ++ + A I
Sbjct: 400 DTFH----AFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAE 455
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPN 363
M + + N Y I GL +++A +++EM K V N
Sbjct: 456 MDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGN 499
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 106/217 (48%), Gaps = 17/217 (7%)
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
+MD Y ++ ++A + M + TP +++ ++ LC+ +++A + K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 360 IVPNTVT-FNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
+ P V FN +++G C NI T V +A + +++ + I P+ +Y+
Sbjct: 253 LFPVDVEGFNVILNGWC--NIWT------------DVTEAKRIWREMGNYCITPNKDSYS 298
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
++ + G L ++ + ++ +G + Y ++ L +E FDEA+ L+ K+ +
Sbjct: 299 HMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEE 358
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
G PD++T+ ++IR L E G+ A +L M++ L
Sbjct: 359 GLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 194/435 (44%), Gaps = 34/435 (7%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCL-NGQVQTALQF 141
D V N +I + H SA ++ K+ +G++P+ TF +++ GL L + +QF
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
H + G L++ K + + L RK+ ++++ D + T++ K
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 202 DTLVTDAFNLYSEMV-AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
+ F+L E++ M +V +N++I G+ G +EA+ ++ MV+ I D +
Sbjct: 232 NGY----FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
TY ++ A G ++ V A ++++ + SL+ Y + ++A+ I M
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNII 380
P + ++ S+N +++G + EA +F EM KNI+ + +I GL ++
Sbjct: 347 PAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI----MISGLAENGF- 397
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
++ + L ++ +G +P ++ + G N Q+ L
Sbjct: 398 --------------GEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 441 LTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
L G+ ++ +I K G+ +EA + M C+ D++++ +I AL + G
Sbjct: 444 LKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP---CL-DSVSWNALIAALGQHGHG 499
Query: 501 YKAEKLLREMMARGL 515
+A + EM+ +G+
Sbjct: 500 AEAVDVYEEMLKKGI 514
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 174/455 (38%), Gaps = 81/455 (17%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G P LN LI+ YC +++ A + +I +P+ I TT++ G C +G +
Sbjct: 44 GFQPRAHILNRLIDVYCKSSELNYARQLFDEI----SEPDKIARTTMVSGYCASGDI--- 96
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
TL G+ + + + D VMYN +I
Sbjct: 97 --------------------TLARGVFE--------------KAPVCMRDTVMYNAMITG 122
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG-QLKEAIALLDEMVTKNINP 257
+ A NL+ +M P TF S++ G +V K+ + +
Sbjct: 123 FSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGY 182
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
N LV + K + + + ++ + ++T++M GY V + L
Sbjct: 183 ITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGY-----VKNGYFDL 237
Query: 318 NSMPQRGVTPNVQ--SYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
G+ N++ +YN MI+G EAL + M I + T+ S+I
Sbjct: 238 GEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA 297
Query: 376 KSNIITY-------------------NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRT 416
+ ++ NSL+ K D+A A+ +K+ + D+ +
Sbjct: 298 TAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK----DLVS 353
Query: 417 YNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME 476
+N L+ G G + A+ + +++ K + ++ IMI+GL + G +E L L S M+
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 477 DNGCMPDAITFETIIRA-----LFEKGENYKAEKL 506
G P F I++ + G+ Y A+ L
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 35/297 (11%)
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
L+ A A+ ++T P + N L+D +CK ++ A + + +P+ + T
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQ----LFDEISEPDKIART 84
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+++ GYC ++ A+ + P + YN MI G A+NLF +M +
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE 142
Query: 359 NIVPNTVTFNSLIDGLC-------------------KSNIITY--NSLLDALCKSHHVDK 397
P+ TF S++ GL + IT N+L+ K
Sbjct: 143 GFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPS 202
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
+ +K+ D+ ++ D R++ +M G + G +E+++ + + + Y MI+
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN---MKLVAYNAMIS 259
Query: 458 GLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA-----LFEKGENYKAEKLLRE 509
G G + EAL ++ +M +G D T+ ++IRA L + G+ A L RE
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 124/287 (43%), Gaps = 16/287 (5%)
Query: 88 NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVA 147
N L++ Y + A ++ K+ K + +++ L+ G +G + A +
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAK----DLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ N +S+ +I+GL + G L+L ++ + +P ++ I S +
Sbjct: 380 K----NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+++++ + S+ N+LI + G ++EA + M D ++N L+
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCL----DSVSWNALIA 491
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ-RGVT 326
A + G EA +V M+K+G++P+ +T +++ V++ + +SM +
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
P Y +I+ LC+ +A ++ + K P + +L+ G
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESLPFK---PTAEIWEALLSG 595
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 112/227 (49%), Gaps = 28/227 (12%)
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
+ VM + + + Y ++ G C + ++A I ++ G+ P+VQ+YN MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIA 400
+ + A L+AEM + +VP+T+T+NS+I GLCK N L ++ V K+ +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN---------KLAQARKVSKSCS 107
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
T+N L++G C+ R+K+ + ++ +G V TYT +I+G
Sbjct: 108 ---------------TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFR 152
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
+ G F+ AL + +M NG +ITF I+ L + E KA +L
Sbjct: 153 QVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 113/215 (52%), Gaps = 15/215 (6%)
Query: 152 LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
++ Y +I+GLCK G+ + + + ++PDV YN +I + + + A L
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKL 67
Query: 212 YSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCK 271
Y+EM+ ++P +T+NS+I+G C +L +A + ++ T+N L++ +CK
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 272 EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS 331
+VK+ N+ M ++G+ NV+TYT+L+ G+ V + N A I M GV + +
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 332 YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT 366
+ ++ LC K + +A+ + + ++V N VT
Sbjct: 179 FRDILPQLCSRKELRKAVAMLLQKS--SMVSNNVT 211
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 109/223 (48%), Gaps = 28/223 (12%)
Query: 250 MVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSE 309
M N++ D YNI++ CK GK EA N+ ++ G++P+V TY ++ S
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR----FSS 60
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
+ +A+ + M +RG+ P+ +YN+MI+GLCK + +A + + + TFN+
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNT 111
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
LI+G CK+ V + L ++ +GI +V TY L+ G + G
Sbjct: 112 LINGYCKAT---------------RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGD 156
Query: 430 LKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
A ++ Q++++ G + T+ ++ LC +A+ +L
Sbjct: 157 FNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 103/214 (48%), Gaps = 15/214 (7%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D NI+I+ C + A ++ +L G QP+ T+ +I+ L A + +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLG----RAEKLY 68
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
++ +G + I+Y ++I+GLCK + + + V +NT+I+ CK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKL---------AQARKVSKSCSTFNTLINGYCKA 119
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
T V D NL+ EM I+ +V+T+ +LI+GF VG A+ + EMV+ + T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVT 296
++ C ++++A +L + K + N VT
Sbjct: 180 RDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M + + + YN +I+GLCK DEA N+F + + P+ T+N +I
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-------- 56
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
++SL +A L ++ +G+ PD TYN ++ GLC++ +L A++V +
Sbjct: 57 -RFSSL----------GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK- 104
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGE 499
+ T+ +ING CK + + L +M G + + IT+ T+I + G+
Sbjct: 105 --------SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGD 156
Query: 500 NYKAEKLLREMMARGL 515
A + +EM++ G+
Sbjct: 157 FNTALDIFQEMVSNGV 172
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 51/228 (22%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+ +IF LL P + + +++ A L ++ G+ PD +T N +
Sbjct: 31 DEAGNIFTNLLISGLQPDV----QTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSM 86
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
I+ C Q ++ A V + TF TLI G C +V+ + + +G
Sbjct: 87 IHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGI 137
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
N I+Y TLI+G ++G +NT +D
Sbjct: 138 VANVITYTTLIHGFRQVGD----------------------FNTALD------------- 162
Query: 211 LYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL---DEMVTKNI 255
++ EMV+ + S +TF ++ C +L++A+A+L MV+ N+
Sbjct: 163 IFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNV 210
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 14/236 (5%)
Query: 160 LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM--VA 217
L+ L + G + +L +++ KPDV YNTII++LC+ A L +M
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 218 MRILPSVVTFNSLIYGFCIVG-----------QLKEAIALLDEMVTKNINPDVYTYNILV 266
R P T+ LI +C G ++ EA + EM+ + PDV TYN L+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG-V 325
D CK ++ A + M +G PN VTY S + Y + +E+ A ++ +M + G
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHG 350
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
P +Y +I+ L + + EA +L EM +VP T+ + D L + +
Sbjct: 351 VPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAS 406
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 29/265 (10%)
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM--PQ 322
L+ +EG VKEA M + KP+V Y ++++ C V KA+++L+ M P
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 323 RGVTPNVQSYNTMINGLCKIKM-----------VDEALNLFAEMDCKNIVPNTVTFNSLI 371
P+ +Y +I+ C+ M + EA +F EM + VP+
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD-------- 282
Query: 372 DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
++TYN L+D CK++ + +A+ L + ++ +G P+ TYN + ++
Sbjct: 283 -------VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIE 335
Query: 432 NAQEVIQDLLTKGYPVT-VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
A E+++ + G+ V TYT +I+ L + EA L+ +M + G +P T++ +
Sbjct: 336 GAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Query: 491 IRALFEKGENYKAEKLLREMMARGL 515
AL +G ++ L + M G+
Sbjct: 396 CDALSSEGLASTLDEELHKRMREGI 420
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 18/235 (7%)
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
++ L+ C + + A + ++ + +P+ + T+I LC G + A D
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 145 VVAQGFHL--NQISYGTLINGLCKMG-QT--RASL--------QLLRKIEGKLVKPDVVM 191
+ GF + +Y LI+ C+ G QT R ++ ++ R++ + PDVV
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
YN +ID CK + A L+ +M +P+ VT+NS I + + +++ AI ++ M
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM- 344
Query: 252 TKNIN---PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDG 303
K + P TY L+ A + + EA +++ M++ G+ P TY + D
Sbjct: 345 -KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 14/238 (5%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG--YQPNTITFTTL 125
A++ ++++ PD+ N +IN C A +L ++ G Y P+T T+T L
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 126 IKGLCLNG-----------QVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
I C G ++ A + ++ +GF + ++Y LI+G CK + +L
Sbjct: 244 ISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRAL 303
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM-RILPSVVTFNSLIYG 233
+L ++ K P+ V YN+ I + A + M + +P T+ LI+
Sbjct: 304 ELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHA 363
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVK 291
+ EA L+ EMV + P YTY ++ DA EG L M++G++
Sbjct: 364 LVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 14/232 (6%)
Query: 293 NVVTYTS---LMDGYCLVSE--VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
NVVT S LM CL E V +A M + P+V +YNT+IN LC++ +
Sbjct: 161 NVVTTASITCLMK--CLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKK 218
Query: 348 ALNLFAEMDCKNI--VPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKI 405
A L +M P+T T+ LI C+ + T A+ + +A + +++
Sbjct: 219 ARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT--GCRKAI--RRRMWEANRMFREM 274
Query: 406 RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLF 465
+G PDV TYN L+DG C+ R+ A E+ +D+ TKG TY I
Sbjct: 275 LFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEI 334
Query: 466 DEALTLLSKMEDNG-CMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ A+ ++ M+ G +P + T+ +I AL E +A L+ EM+ GL+
Sbjct: 335 EGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLV 386
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGIT--PDIVTL 87
V + ++ F R+ P + + I+ +L ++ ++ A L Q++ G PD T
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 88 NILINCYCH-----------QAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQ 136
ILI+ YC + ++ A + ++L +G+ P+ +T+ LI G C ++
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 137 TALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE--GKLVKPDVVMYNT 194
AL+ + + +G NQ++Y + I + +++++R ++ G V P Y
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTP 359
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFN 228
+I +L + +A +L EMV ++P T+
Sbjct: 360 LIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/500 (20%), Positives = 219/500 (43%), Gaps = 55/500 (11%)
Query: 33 VVSIFNRLLRMSPTPPIIE---------FGKILTSLVKMKHYSTAISLSHQLEFTGITPD 83
+VS+F R + + E + +L K+ A+ ++ + + P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+ L+ +A++ + ++K G+ + T L QV A + D
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
+ + + +S+ T++ G + G R +L++++ + + +KP + +++ ++
Sbjct: 195 RMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 204 LVTDAFNLYSEMVAMRI-LPSVVTFN-SLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
L++ ++ AMR S+V + +L+ + G L+ A L D M+ +N V +
Sbjct: 251 LISVGKEIHG--YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN----VVS 304
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
+N ++DA+ + KEA + M+ +GVKP V+ + + ++ + ++I
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC------ 375
+ G+ NV N++I+ CK K VD A ++F ++ + + V++N++I G
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPI 420
Query: 376 --------------KSNIITYNSLLDALCK---SHHVDKAIALIKKIRDQGIQPDVRTYN 418
K + TY S++ A+ + +HH ++ + + +V
Sbjct: 421 DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR---SCLDKNVFVTT 477
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+D + G + A+ +I D++++ + V T+ MI+G G AL L +M+
Sbjct: 478 ALVDMYAKCGAIMIAR-LIFDMMSERH---VTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 479 GCMPDAITFETIIRALFEKG 498
P+ +TF ++I A G
Sbjct: 534 TIKPNGVTFLSVISACSHSG 553
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 178/409 (43%), Gaps = 65/409 (15%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTG-ITPDIVTLNILINCYCHQAQITSAFSVLAKILKK 113
I T+LV M ++ + QL F G + ++V+ N +I+ Y A + K+L +
Sbjct: 273 ISTALVDMYAKCGSLETARQL-FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC-KMGQTRA 172
G +P ++ V AL H A L + G I+ L ++G R
Sbjct: 332 GVKPTDVS-------------VMGAL----HACAD---LGDLERGRFIHKLSVELGLDR- 370
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+V + N++I CK V A +++ ++ + ++V++N++I
Sbjct: 371 ---------------NVSVVNSLISMYCKCKEVDTAASMFGKLQSR----TLVSWNAMIL 411
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
GF G+ +A+ +M ++ + PD +TY ++ A + A + V+M+ +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
NV T+L+D Y + A+ I + M +R VT ++N MI+G AL LF
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT----TWNAMIDGYGTHGFGKAALELF 527
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
EM I PN VTF S+I +++ L++A K ++ K + I+
Sbjct: 528 EEMQKGTIKPNGVTFLSVISA------CSHSGLVEAGLKCFYMMK--------ENYSIEL 573
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK 461
+ Y ++D L GRL A + I + K V Y M+ G C+
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP---AVNVYGAML-GACQ 618
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 162/363 (44%), Gaps = 28/363 (7%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
P++ N+LI C+ A+ + AF ++LK P+ ITF LIK V Q
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
H +V GF + +L++ G A+ +I G++ DVV + +++ CK
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAA----GRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
+V +A ++ EM + T++ +I G+ ++AI L + M + + +
Sbjct: 196 CGMVENAREMFDEMPHRNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
++ + G ++ ++K + N++ T+L+D + ++ KA ++ +P
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT 381
+ + S++++I GL +A++ F++M +P VTF +++ +
Sbjct: 312 E----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL-- 365
Query: 382 YNSLLDALCKSHHVDKAIALIKKI-RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
V+K + + + + +D GI+P + Y ++D L G+L A+ I +
Sbjct: 366 -------------VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
Query: 441 LTK 443
K
Sbjct: 413 HVK 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/341 (18%), Positives = 147/341 (43%), Gaps = 51/341 (14%)
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVV---TFNS----LIYGFCIVGQLKEAIALLDEMV 251
L + L++D F VA R+L V TFN L Y + I Q++
Sbjct: 35 LLRTHLISDVF------VASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQ---------- 78
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
NP+++ +N+L+ F + +A M+K + P+ +T+ L+ + V
Sbjct: 79 ----NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+ + + + G +V N++++ + A +F +M +++ V++ S++
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV----VSWTSMV 190
Query: 372 DGLCK----------------SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
G CK N+ T++ +++ K++ +KAI L + ++ +G+ +
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
++ G L+ + + ++ V + T +++ + G ++A+ + +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGL 310
Query: 476 EDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
+ D++++ +II+ L G +KA +M++ G +
Sbjct: 311 PET----DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 170/357 (47%), Gaps = 48/357 (13%)
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFN 210
+ +SY +I+G + G+ +L RK+ ++ + D+V +N +I ++ + A
Sbjct: 92 RWSSVSYNGMISGYLRNGE----FELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 147
Query: 211 LYSEMVAMRILPS--VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+ I+P V ++N+++ G+ G + +A ++ D M KN DV ++N L+ A
Sbjct: 148 LFE------IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKN---DV-SWNALLSA 197
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
+ + K++EA ++ K +V++ L+ G+ ++ +A+ +SM R +
Sbjct: 198 YVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----D 249
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS------------LIDGLCK 376
V S+NT+I G + +DEA LF E +++ T + L D + +
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 377 SNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP--DVRTYNILMDGLCEEGRLKNAQ 434
N +++N++L + ++ A L + P +V T+N ++ G + G++ A+
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFD------VMPCRNVSTWNTMITGYAQCGKISEAK 363
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
+ D + K PV ++ MI G + G EAL L +ME G + +F + +
Sbjct: 364 NLF-DKMPKRDPV---SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSAL 416
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/468 (20%), Positives = 203/468 (43%), Gaps = 57/468 (12%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
VDD S+F+R+ P + + +L++ V+ A L E +V+ N
Sbjct: 173 VDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRE----NWALVSWNC 224
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + + +I A + + + +++ T+I G +G++ A Q D Q
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQ- 279
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ ++ +++G Q R ++ R++ K+ + + V +N ++ + + A
Sbjct: 280 ---DVFTWTAMVSGYI---QNRM-VEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 210 NLYSEMVAMRILP--SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
L+ ++P +V T+N++I G+ G++ EA L D+M + D ++ ++
Sbjct: 333 ELFD------VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIA 382
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
+ + G EA + M ++G + N +++S + V + K + + + G
Sbjct: 383 GYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
N ++ CK ++EA +LF EM K+I V++N++I G +
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI----VSWNTMIAGYSRHGF-------- 490
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+ A+ + ++ +G++PD T ++ G + ++ +T+ Y V
Sbjct: 491 -------GEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFY-TMTQDYGV 542
Query: 448 --TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ Y M++ L + GL ++A L+ M PDA + T++ A
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGA 587
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 164/390 (42%), Gaps = 98/390 (25%)
Query: 154 QISYGTLINGL---CKMGQTRASLQLLRK-----IEGKLVKP-------DVVMYNTIIDS 198
Q+ Y T +NGL C A+ L++ I+ KP D+ +N I S
Sbjct: 15 QLHY-TSLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISS 73
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
+ +A ++ M S V++N +I G+ G+ + A L DEM + D
Sbjct: 74 YMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMPER----D 125
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILN 318
+ ++N+++ GY + KA+ +
Sbjct: 126 LVSWNVMIK-----------------------------------GYVRNRNLGKARELFE 150
Query: 319 SMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN 378
MP+R +V S+NTM++G + VD+A ++F M K N V++N+L+ +++
Sbjct: 151 IMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNS 202
Query: 379 ----------------IITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
++++N LL K K I ++ D DV ++N ++
Sbjct: 203 KMEEACMLFKSRENWALVSWNCLLGGFVKK----KKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVT-VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCM 481
G + G++ A+++ + PV V T+T M++G + + +EA L KM +
Sbjct: 259 GYAQSGKIDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER--- 310
Query: 482 PDAITFETIIRALFEKGENYKAEKLLREMM 511
+ +++ ++ A + +GE + K L ++M
Sbjct: 311 -NEVSWNAML-AGYVQGERMEMAKELFDVM 338
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 199/444 (44%), Gaps = 42/444 (9%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G D+ + ++N Y ++ A + K+ K+ + I +TT++ G G+ A
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKA 201
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP----DVVMYNT 194
++F+ + +GF +++ L+ +G T+ R + G L + +VV+ +
Sbjct: 202 VEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG----RSVHGYLYRTGLPMNVVVETS 257
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN 254
++D K + A ++S M + + V++ SLI GF G +A + EM +
Sbjct: 258 LVDMYAKVGFIEVASRVFSRM----MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG 313
Query: 255 INPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAK 314
PD+ T ++ A + G +K V ++K+ V + VT T+LMD Y ++ ++
Sbjct: 314 FQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSR 372
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
I + ++ ++ +NTMI+ E ++LF +M NI P+ TF SL+ L
Sbjct: 373 EIFEHVGRK----DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSAL 428
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
S ++ ++ +I K + IQP + Y L+D L GR++ A
Sbjct: 429 SHSGLVEQGQHWFSV-----------MINKYK---IQPSEKHYVCLIDLLARAGRVEEAL 474
Query: 435 EVI-QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
++I + L P+ V + IN + D A + ++ PD+I +T++
Sbjct: 475 DMINSEKLDNALPIWVALLSGCINHR-NLSVGDIAANKILQLN-----PDSIGIQTLVSN 528
Query: 494 LFEKGENYKAEKLLREMMARGLLE 517
F +K +R++M G +E
Sbjct: 529 FFATANKWKEVAKVRKLMRNGAME 552
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 190/453 (41%), Gaps = 44/453 (9%)
Query: 65 YSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTT 124
+ A+SL +++F+G+ PD T N + +I SV + + K G + + +
Sbjct: 113 HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 125 LIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL 184
LI GQV A + D + + + +S+ ++I+G + G + ++ L RK+E +
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 185 VKPDVVMYNTIIDSLCKDTLVTD--AFNLYSEM-VAMRILPSVVTFNSLI--YGFCIVGQ 239
+PD T++ L + + D L EM + +I S + LI YG C G
Sbjct: 229 FEPDE---RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKC--GD 283
Query: 240 LKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTS 299
L A + ++M+ K D + ++ + + GK EA + M K GV P+ T ++
Sbjct: 284 LDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLST 339
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKN 359
++ V + K I + + N+ +++ K V+EAL +F M KN
Sbjct: 340 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKN 399
Query: 360 IVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNI 419
T+N+++ A H +A+ L ++ + P T+
Sbjct: 400 EA-------------------TWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG 437
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTK-GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
++ G + ++ + G + YT +I+ L + G+ DEA + +
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
PD I I+ A ++ + EK +R +M
Sbjct: 498 ---PDEIMLAAILGACHKRKDVAIREKAMRMLM 527
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 170/406 (41%), Gaps = 33/406 (8%)
Query: 77 FTGITP-DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
F IT D V+ N +I+ Y A + K+ ++G++P+ T +++ G +
Sbjct: 190 FDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDL 249
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
+T + + + L+ LI+ K G L R++ +++K D V + +
Sbjct: 250 RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD----LDSARRVFNQMIKKDRVAWTAM 305
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
I ++ ++AF L+ EM + P T ++++ VG L+ + ++
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
++Y LVD + K G+V+EA V M VK N T+ +++ Y +A
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRVFEAM---PVK-NEATWNAMITAYAHQGHAKEALL 421
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGL 374
+ + M V P+ ++ +++ +V + F EM +VP
Sbjct: 422 LFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP------------ 466
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR-LKNA 433
I Y +++D L ++ +D+A +++ G ++ IL G C + + +
Sbjct: 467 ---KIEHYTNIIDLLSRAGMLDEAWEFMERF--PGKPDEIMLAAIL--GACHKRKDVAIR 519
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
++ ++ L+ Y I N L ++DE+ + + M D G
Sbjct: 520 EKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 109/275 (39%), Gaps = 61/275 (22%)
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMK-QGVKPNVVTYTSLMDGYCLVSEVNKAK 314
P+ Y++N ++ EA L MK G+KP+ TY + + E+ +
Sbjct: 93 EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGR 152
Query: 315 YILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL 374
+ +S+ + G+ +V +++I K V A LF E+ ++ TV++NS+I G
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERD----TVSWNSMISGY 208
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLC--------- 425
++ + A+ L +K+ ++G +PD RT + M G C
Sbjct: 209 SEAG---------------YAKDAMDLFRKMEEEGFEPDERTL-VSMLGACSHLGDLRTG 252
Query: 426 ---EE------------------------GRLKNAQEVIQDLLTKGYPVTVRTYTIMING 458
EE G L +A+ V ++ K +T MI
Sbjct: 253 RLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV----AWTAMITV 308
Query: 459 LCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+ G EA L +ME G PDA T T++ A
Sbjct: 309 YSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSA 343
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 180/429 (41%), Gaps = 79/429 (18%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGY-QPNTITFTTLIKGLCLNGQVQTAL 139
+P N LI Y ++ S+L ++++ G +P+ TF ++K NGQV+
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID-- 197
H V+ GF DVV+ + +D
Sbjct: 131 SVHGLVLRIGF-----------------------------------DKDVVVGTSFVDFY 155
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
CKD A ++ EM + V++ +L+ + G+L+EA ++ D M +N+
Sbjct: 156 GKCKDLF--SARKVFGEMPER----NAVSWTALVVAYVKSGELEEAKSMFDLMPERNLG- 208
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
++N LVD K G + A + M K+ ++++YTS++DGY ++ A+ +
Sbjct: 209 ---SWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLF 261
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
RGV +V++++ +I G + +EA +F+EM KN+ P+ L+ +
Sbjct: 262 EE--ARGV--DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQM 317
Query: 378 NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
+D+ + K + P + I M+ C G + A ++
Sbjct: 318 GCFELCEKVDSYLHQR--------MNKFSSHYVVPAL----IDMNAKC--GHMDRAAKLF 363
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA---- 493
+++ + + +Y M+ G+ G EA+ L KM D G +PD + F I++
Sbjct: 364 EEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 494 -LFEKGENY 501
L E+G Y
Sbjct: 420 RLVEEGLRY 428
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 175/437 (40%), Gaps = 74/437 (16%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G D+V ++ Y + SA V ++ ++ N +++T L+ +G+++ A
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPER----NAVSWTALVVAYVKSGELEEA 195
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
D + + N S+ L++GL K G L +K+ ++ K D++ Y ++ID
Sbjct: 196 KSMFDLMPER----NLGSWNALVDGLVKSGD----LVNAKKLFDEMPKRDIISYTSMIDG 247
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
K + A +L+ E + V +++LI G+ GQ EA + EM KN+ PD
Sbjct: 248 YAKGGDMVSARDLFEEARGV----DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 259 V------------------------------------YTYNILVDAFCKEGKVKEATNVL 282
Y L+D K G + A +
Sbjct: 304 EFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
M ++ ++V+Y S+M+G + ++A + M G+ P+ ++ ++ +
Sbjct: 364 EEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
++V+E L F M K + + Y+ +++ L ++ + +A LI
Sbjct: 420 RLVEEGLRYFELMRKKYSILASPDH--------------YSCIVNLLSRTGKLKEAYELI 465
Query: 403 KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKE 462
K + + + L+ G G + A EV+ L + P + +Y ++ N
Sbjct: 466 KSMP---FEAHASAWGSLLGGCSLHGNTEIA-EVVARHLFELEPQSAGSYVLLSNIYAAL 521
Query: 463 GLFDEALTLLSKMEDNG 479
+ + L KM +NG
Sbjct: 522 DRWTDVAHLRDKMNENG 538
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 168/413 (40%), Gaps = 27/413 (6%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
IV+ +++ Y + A + +++ K +P+ + +++ ++ H
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
VV G + +L K GQ + L K++ P+++++N +I K+
Sbjct: 247 SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNG 302
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+A +++ EM+ + P ++ S I VG L++A ++ + + + DV+ +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
L+D F K G V+ A V + + +VV +++++ GY L +A + +M +
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAMERG 418
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
GV PN ++ ++ MV E F M I P Y
Sbjct: 419 GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQ---------------HYA 463
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
++D L ++ H+D+A +IK + +QP V + L+ C++ R E L
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCM---PVQPGVTVWGALLSA-CKKHRHVELGEYAAQQLFS 519
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFE 496
P Y + N L+D + +M++ G D +R E
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLE 572
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 190/446 (42%), Gaps = 43/446 (9%)
Query: 65 YSTAI-SLSHQLEFTGITPDIVTLNI-----LINCYCHQAQITSAFSVLAKILKKGYQPN 118
Y++ I S +H+ + I ++ L + LI H + + ++ +P
Sbjct: 24 YASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 119 TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
+ +I+G N Q AL + ++ + ++ L+ + LQ+ R
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH----LQMGR 139
Query: 179 KIEGKLVK----PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP--SVVTFNSLIY 232
+ ++ + DV + N +I K + A ++ + LP ++V++ +++
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP----LPERTIVSWTAIVS 195
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
+ G+ EA+ + +M ++ PD +++AF +K+ ++ A ++K G++
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
SL Y +V AK + + M +PN+ +N MI+G K EA+++F
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMK----SPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQP 412
EM K++ P+T++ S I A + +++A ++ + + +
Sbjct: 312 HEMINKDVRPDTISITSAI---------------SACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
DV + L+D + G ++ A+ V L + V ++ MI G G EA++L
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLY 412
Query: 473 SKMEDNGCMPDAITFETIIRALFEKG 498
ME G P+ +TF ++ A G
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSG 438
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 133/270 (49%), Gaps = 5/270 (1%)
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCL----NGQVQTALQFHDHV 145
L + + + + FS + ++L+ + + I + + L +G + A + D +
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 146 VAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTL 204
S+ L++ + +++ +++ KL + PD+V YNT+I +LC+
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
+ D +++ E+ P +++FN+L+ F E + D M +KN++P++ +YN
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
V + K +A N++ VM +G+ P+V TY +L+ Y + + + + N M ++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAE 354
+TP+ +Y +I LCK +D A+ + E
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 140/300 (46%), Gaps = 26/300 (8%)
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++ SE +RI+ L+YG+ G + A L DEM N V ++N L+ A+
Sbjct: 118 DIKSEDFVIRIM--------LLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAY 167
Query: 270 CKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPN 328
K+ EA + ++ G+ P++VTY +++ C ++ I + + G P+
Sbjct: 168 VNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPD 227
Query: 329 VQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA 388
+ S+NT++ + ++ E ++ M KN+ PN ++NS + GL ++ T
Sbjct: 228 LISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT------- 280
Query: 389 LCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVT 448
A+ LI ++ +GI PDV TYN L+ + L+ + ++ KG
Sbjct: 281 --------DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 449 VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLR 508
TY ++I LCK+G D A+ + + + + ++ ++ L G+ +A +L++
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKK-GYQPNTITFTTLIKGLCLNGQVQTALQFH 142
+ + N L++ Y + ++ A ++ +K G P+ +T+ T+IK LC G + L
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ + GF + IS+ TL+ + ++ ++ K + P++ YN+ + L ++
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
TDA NL M I P V T+N+LI + + L+E + +EM K + PD TY
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGV--KPNV 294
+L+ CK+G + A V +K + +PN+
Sbjct: 337 CMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 141/302 (46%), Gaps = 3/302 (0%)
Query: 52 FGKILTSLVKMKHYSTAIS-LSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKI 110
+ + L + K +ST L +Q +F I + + I++ Y + A + ++
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFDEM 148
Query: 111 LKKGYQPNTITFTTLIKGLCLNGQVQTALQ-FHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ + +F L+ + ++ A++ F + G + ++Y T+I LC+ G
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
L + ++E +PD++ +NT+++ + L + ++ M + + P++ ++NS
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 230 LIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG 289
+ G + +A+ L+D M T+ I+PDV+TYN L+ A+ + ++E M ++G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
+ P+ VTY L+ C ++++A + + + Y ++ L +DEA
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 350 NL 351
L
Sbjct: 389 QL 390
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 95/189 (50%), Gaps = 1/189 (0%)
Query: 189 VVMYNTIIDSLCKDTLVTDAFNLYSEMVA-MRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
V +N ++ + + +A + E+ + I P +VT+N++I C G + + +++
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
+E+ PD+ ++N L++ F + E + +M + + PN+ +Y S + G
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 308 SEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTF 367
+ A +++ M G++P+V +YN +I ++E + + EM K + P+TVT+
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 368 NSLIDGLCK 376
LI LCK
Sbjct: 337 CMLIPLLCK 345
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 300 LMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK- 358
L+ GY ++E A + + MP+ V+S+N +++ K +DEA+ F E+ K
Sbjct: 130 LLYGYSGMAE--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKL 187
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
I P+ ++TYN+++ ALC+ +D +++ +++ G +PD+ ++N
Sbjct: 188 GITPD---------------LVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L++ + + +K +R+Y + GL + F +AL L+ M+
Sbjct: 233 TLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTE 292
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
G PD T+ +I A Y+ + L E+M
Sbjct: 293 GISPDVHTYNALITA-------YRVDNNLEEVM 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 100/254 (39%), Gaps = 36/254 (14%)
Query: 30 VDDVVSIFNRLL-RMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+D+ + F L ++ TP ++ + ++ +L + +S+ +LE G PD+++ N
Sbjct: 173 LDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFN 232
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
L+ + + + + K PN ++ + ++GL N + AL D + +
Sbjct: 233 TLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTE 292
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
G + PDV YN +I + D + +
Sbjct: 293 G-----------------------------------ISPDVHTYNALITAYRVDNNLEEV 317
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
Y+EM + P VT+ LI C G L A+ + +E + + Y +V+
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVER 377
Query: 269 FCKEGKVKEATNVL 282
GK+ EAT ++
Sbjct: 378 LMGAGKIDEATQLV 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
+P I + + L + K ++ A++L ++ GI+PD+ T N LI Y +
Sbjct: 260 SPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMK 319
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
++ +KG P+T+T+ LI LC G + A++ + + Y ++ L
Sbjct: 320 CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLM 379
Query: 166 KMGQTRASLQLLRKIEGKL 184
G+ + QL++ GKL
Sbjct: 380 GAGKIDEATQLVK--NGKL 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
++DD++SIF L + P +I F +L + + + + ++ ++P+I + N
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+ + T A +++ + +G P+ T+ LI ++ ++ ++ ++ + +
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRK-IEGKLV-KPDVVMYNTIIDSL 199
G + ++Y LI LCK G ++++ + I+ KL+ +P+ MY +++ L
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN--MYKPVVERL 378
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 147/304 (48%), Gaps = 5/304 (1%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G+ D +T + +I C A ++ K G P+ +T++ ++ +G+V+
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
L ++ VA G+ + I++ L + G +L++++ VKP+VV+YNT++++
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
+ + A +L++EM+ + P+ T +L+ + ++A+ L +EM K D
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQGV--KPNVVTYTSLMDGYCLVSEVNKAKYI 316
YN L++ C + ++E L MK+ V +P+ +YT++++ Y + KA +
Sbjct: 396 FILYNTLLN-MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID--GL 374
M + GV NV ++ L K K +D+ + +F + + P+ L+ L
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMAL 514
Query: 375 CKSN 378
C+S+
Sbjct: 515 CESS 518
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 14/296 (4%)
Query: 119 TITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLR 178
TI + +K L Q Q + +V G L+ I+Y T+I + +++
Sbjct: 186 TIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFE 245
Query: 179 KIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
++ + PD V Y+ I+D K V + +LY VA P + F+ L F G
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 239 QLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYT 298
+L EM + ++ P+V YN L++A + GK A ++ M++ G+ PN T T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+L+ Y A + M + + YNT++N I + +EA LF +M K
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM--K 423
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDV 414
V C+ + +Y ++L+ +KA+ L +++ G+Q +V
Sbjct: 424 ESVQ------------CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 13/286 (4%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
I + I+T + Y+ AI ++ TG+ PD VT + +++ Y ++ S+ +
Sbjct: 222 ITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ G++P+ I F+ L K G + + N + Y TL+ + + G+
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 170 TRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNS 229
+ L ++ + P+ ++ K DA L+ EM A + + +N+
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 230 LIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQ 288
L+ +G +EA L ++M PD ++Y +++ + GK ++A + M+K
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 289 GVKPNVVTYTSLMDGYCLVSEVNKAK------YILNSMPQRGVTPN 328
GV+ NV+ T CLV + KAK Y+ + +RGV P+
Sbjct: 462 GVQVNVMGCT------CLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 121/265 (45%), Gaps = 3/265 (1%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
+ + F R+ + P + + IL K +SL + TG PD + ++L
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
+ VL ++ +PN + + TL++ + G+ A + ++ G
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT-LVTDAF 209
N+ + L+ K R +LQL +++ K D ++YNT+++ +C D L +A
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAE 416
Query: 210 NLYSEM-VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
L+++M +++ P ++ +++ + G+ ++A+ L +EM+ + +V LV
Sbjct: 417 RLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQC 476
Query: 269 FCKEGKVKEATNVLAVMMKQGVKPN 293
K ++ + V + +K+GVKP+
Sbjct: 477 LGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 132/292 (45%), Gaps = 20/292 (6%)
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
VT SL +G QL E +AL EMV + D TY+ ++ + +A
Sbjct: 191 VTMKSLRFGRQF--QLIEEMAL--EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFER 246
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M K G+ P+ VTY++++D Y +V + + G P+ +++ + +
Sbjct: 247 MYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGD 306
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
D + EM ++ PN ++ YN+LL+A+ ++ A +L +
Sbjct: 307 YDGIRYVLQEMKSMDVKPN---------------VVVYNTLLEAMGRAGKPGLARSLFNE 351
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
+ + G+ P+ +T L+ + ++A ++ +++ K +P+ Y ++N GL
Sbjct: 352 MLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGL 411
Query: 465 FDEALTLLSKMEDN-GCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+EA L + M+++ C PD ++ ++ G+ KA +L EM+ G+
Sbjct: 412 EEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGV 463
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 119/275 (43%), Gaps = 7/275 (2%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
V++V+S++ R + P I F + + Y + +++ + P++V N
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
L+ + A S+ ++L+ G PN T T L+K + ALQ + + A+
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKI-EGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ ++ I Y TL+N +G + +L + E +PD Y +++ A
Sbjct: 392 WPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKA 451
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD- 267
L+ EM+ + +V+ L+ ++ + + + D + + + PD L+
Sbjct: 452 MELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
Query: 268 -AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
A C+ ++A V+A + + K +VT+ +L+
Sbjct: 512 MALCESS--EDAEKVMACLERANKK--LVTFVNLI 542
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 153/338 (45%), Gaps = 28/338 (8%)
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+L +LRK V D V YN +I + A L EM + + P V+T+ S+I
Sbjct: 149 ALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMIN 208
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG--- 289
G+C G++ +A L EM + + TY+ +++ CK G ++ A +LA M K+
Sbjct: 209 GYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGG 268
Query: 290 -VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEA 348
+ PN VTYT ++ +C V +A +L+ M RG PN + +I G+
Sbjct: 269 LISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGV--------- 319
Query: 349 LNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIIT----YNSLLDALCKSHHVDKAIALIKK 404
L + D K + LID L K ++ ++S +L + ++A + +
Sbjct: 320 --LENDEDVK-------ALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRL 370
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT--YTIMINGLCKE 462
+ +G++PD + + LC R + + Q++ K T+ + + +++ GLC++
Sbjct: 371 MLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQ 430
Query: 463 GLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGEN 500
G EA L M D E II AL + G+
Sbjct: 431 GNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDE 468
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 124/254 (48%), Gaps = 12/254 (4%)
Query: 242 EAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLM 301
EA+ +L + N+ D YN+++ F +G + A ++ M G+ P+V+TYTS++
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 302 DGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIV 361
+GYC +++ A + M + N +Y+ ++ G+CK ++ AL L AEM+ ++
Sbjct: 208 NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKED-- 265
Query: 362 PNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILM 421
GL N +TY ++ A C+ V++A+ ++ ++ ++G P+ T +L+
Sbjct: 266 ---------GGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Query: 422 DGLCE-EGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
G+ E + +K ++I L+ G ++ L + ++EA + M G
Sbjct: 317 QGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGV 376
Query: 481 MPDAITFETIIRAL 494
PD + + R L
Sbjct: 377 RPDGLACSHVFREL 390
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 8/309 (2%)
Query: 76 EFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
EF + D V N++I + + + A ++ ++ G P+ IT+T++I G C G++
Sbjct: 158 EFN-VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKI 216
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIE----GKLVKPDVVM 191
A + + LN ++Y ++ G+CK G +L+LL ++E G L+ P+ V
Sbjct: 217 DDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVT 276
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIA-LLDEM 250
Y +I + C+ V +A + M +P+ VT LI G + +A++ L+D++
Sbjct: 277 YTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKL 336
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
V ++ + + + +EA + +M+ +GV+P+ + + + CL+
Sbjct: 337 VKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERY 396
Query: 311 NKAKYILNSMPQRGVTPNVQS--YNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+ + ++ V + S + ++ GLC+ EA L M K +
Sbjct: 397 LDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVE 456
Query: 369 SLIDGLCKS 377
+I+ L K+
Sbjct: 457 KIIEALKKT 465
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 310 VNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS 369
++A ++L P+ V + +YN +I ++ A L EMDC + P+ +T+ S
Sbjct: 146 ADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTS 205
Query: 370 LIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR 429
+I+G C + +D A L K++ + TY+ +++G+C+ G
Sbjct: 206 MINGYCNAG---------------KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 430 LKNAQEVIQDLLTKG-----YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDA 484
++ A E++ ++ + P V TYT++I C++ +EAL +L +M + GCMP+
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAV-TYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNR 309
Query: 485 ITFETIIRALFEKGENYKA-EKLLREMMARG 514
+T +I+ + E E+ KA KL+ +++ G
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 158/344 (45%), Gaps = 18/344 (5%)
Query: 83 DIVTLNILINCYCHQAQIT-SAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQF 141
++ T+ I++ C+QA + A VL K + +T+ + +I+ G + A
Sbjct: 129 NVKTMRIVLT-LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 142 HDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCK 201
+ G + + I+Y ++ING C G+ + +L +++ + V Y+ I++ +CK
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 202 DTLVTDAFNLYSEMVAMR----ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+ A L +EM I P+ VT+ +I FC +++EA+ +LD M + P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 258 DVYTYNILVDAFCK-EGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
+ T +L+ + + VK + ++ ++K G ++S + +A+ I
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN---SLIDG 373
M RGV P+ + + + LC ++ + L+ E++ K+ V +T+ + L+ G
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKD-VKSTIDSDIHAVLLLG 426
Query: 374 LCKSN-----IITYNSLLDA--LCKSHHVDKAIALIKKIRDQGI 410
LC+ S+LD K HV+K I +KK D+ +
Sbjct: 427 LCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDL 470
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 73/136 (53%)
Query: 375 CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
C N+ T +L +++ D+A+ +++K + + D YN+++ ++G L A
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
+I+++ G V TYT MING C G D+A L +M + C+ +++T+ I+ +
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245
Query: 495 FEKGENYKAEKLLREM 510
+ G+ +A +LL EM
Sbjct: 246 CKSGDMERALELLAEM 261
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
Query: 158 GTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA 217
+IN ++G + ++ ++ + K + +N ++++ ++ E+
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPG 169
Query: 218 -MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVK 276
+ I P V ++N+LI G C G EA+AL+DE+ K + PD T+NIL+ +GK +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
E + A M+++ VK ++ +Y + + G + ++ + + + + + P+V ++ MI
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 337 NGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVD 396
G +DEA+ + E++ P FNSL+ A+CK+ ++
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLP---------------AICKAGDLE 334
Query: 397 KAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
A L K+I + + D ++D L + + A+E+++ T Y
Sbjct: 335 SAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 122/253 (48%), Gaps = 16/253 (6%)
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR- 323
+++ + + G + A V M ++ K +++ +L++ + + + I +P +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYN 383
+ P+V SYNT+I GLC EA+ L E++ K + P+ +TF NI+ +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITF----------NILLHE 221
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
S ++ + ++ ++ ++ D+R+YN + GL E + + + L
Sbjct: 222 SYTKG-----KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGN 276
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
V T+T MI G EG DEA+T ++E NGC P F +++ A+ + G+ A
Sbjct: 277 ELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Query: 504 EKLLREMMARGLL 516
+L +E+ A+ LL
Sbjct: 337 YELCKEIFAKRLL 349
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 1/253 (0%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFT-GITPDIVTLNI 89
++ +F+ + + + F +L + V K + + +L I PD+ + N
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
LI C + T A +++ +I KG +P+ ITF L+ G+ + Q +V +
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAF 209
+ SY + GL ++ + L K++G +KPDV + +I + + +A
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 210 NLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
Y E+ P FNSL+ C G L+ A L E+ K + D +VDA
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDAL 362
Query: 270 CKEGKVKEATNVL 282
K K EA ++
Sbjct: 363 VKGSKQDEAEEIV 375
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 16/275 (5%)
Query: 195 IIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK- 253
II+ + + +A ++ EM + ++FN+L+ + + E+ K
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 254 NINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKA 313
+I PDV +YN L+ C +G EA ++ + +G+KP+ +T+ L+ + +
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 314 KYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+ I M ++ V +++SYN + GL +E ++LF ++ + P+ TF ++I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 374 LCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNA 433
+D+AI K+I G +P +N L+ +C+ G L++A
Sbjct: 292 FVSEG---------------KLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESA 336
Query: 434 QEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
E+ +++ K V +++ L K DEA
Sbjct: 337 YELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ--FHDHVVA 147
+IN Y +A V ++ ++ + ++F L+ C+N + ++ F +
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELPGK 170
Query: 148 QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
+ SY TLI GLC G ++ L+ +IE K +KPD + +N ++ +
Sbjct: 171 LSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
+++ MV + + ++N+ + G + + +E ++L D++ + PDV+T+ ++
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 268 AFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
F EGK+ EA + K G +P + SL+ C ++ A + + + +
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLV 350
Query: 328 NVQSYNTMINGLCKIKMVDEA 348
+ +++ L K DEA
Sbjct: 351 DEAVLQEVVDALVKGSKQDEA 371
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/482 (20%), Positives = 200/482 (41%), Gaps = 66/482 (13%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D+ + N +I+C+ + A + ++ G++PN+++ T I ++ + H
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIH 231
Query: 143 DHVVAQGFHLNQISYGTLIN--GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
V +GF L++ L++ G C L++ R++ K+ + +V +N++I
Sbjct: 232 RKCVKKGFELDEYVNSALVDMYGKCD------CLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSL---------------IYGFCIVGQLKEAI- 244
+ + M+ PS T S+ I+G+ I + I
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 245 --------------ALLDEMVTKNINPDVY-TYNILVDAFCKEGKVKEATNVLAVMMKQG 289
A L E V DV ++N+++ ++ G +A V M+ G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 290 VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEAL 349
VKP+VVT+TS++ ++ + K K I S+ + + + + +++ K EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 350 NLFAEMDCKNIVPNTV----------------TFNSLIDGLCKSNIITYNSLLDALCKSH 393
+F + K++V TV F+ + K + +T ++L A +
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 394 HVDKAIALIKKIRDQ-GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
+D+ + ++R + GI+P + Y+ ++D L GRL A E+IQ T
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ--TPETSDNAELL 583
Query: 453 TIMINGLC---KEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLRE 509
+ + + C + L D LL +E+ PD + ++ L+ GE++ A + +R
Sbjct: 584 STLFSACCLHLEHSLGDRIARLL--VEN---YPDDASTYMVLFNLYASGESWDAARRVRL 638
Query: 510 MM 511
M
Sbjct: 639 KM 640
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 141/318 (44%), Gaps = 43/318 (13%)
Query: 185 VKPDVVMYNTIIDSL--CKDTL----VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVG 238
++ DVV+ ++I+ CKD V + F++ S+ V +NSL+ G+
Sbjct: 35 LRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSD---------VYIWNSLMSGYSKNS 85
Query: 239 QLKEAIALLDEMVTKNIN-PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
+ + + ++ +I PD +T+ ++ A+ G+ + +++K G +VV
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
+SL+ Y + + + + MP+R +V S+NT+I+ + ++AL LF M+
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 358 KNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
PN+V+ I A + +++ + +K +G + D
Sbjct: 202 SGFEPNSVSLTVAI---------------SACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 418 NILMD--GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
+ L+D G C+ L+ A+EV Q + K ++ + MI G +G + +L++M
Sbjct: 247 SALVDMYGKCD--CLEVAREVFQKMPRK----SLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 476 EDNGCMPDAITFETIIRA 493
G P T +I+ A
Sbjct: 301 IIEGTRPSQTTLTSILMA 318
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/439 (22%), Positives = 177/439 (40%), Gaps = 43/439 (9%)
Query: 81 TPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQ 140
TP ++ N ++ T ++ ++ +G P+ T ++K + +V +
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
H + V G + SY + N L M + +++ K+ ++ + DVV +N +I S
Sbjct: 68 VHGYAVKAGLEFD--SY--VSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFN--SLIYGFCIVGQLK--EAIALLDEMVTKNIN 256
+ DA ++ M S + F+ +++ LK E + V
Sbjct: 124 GNGRFEDAIGVFKRMSQ----ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFE 179
Query: 257 PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYI 316
V N LVD FCK G + +A V M + VK +TS++ GY +++A+ +
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEARVL 235
Query: 317 LNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
P + +V + M+NG + DEAL LF M I P+ SL+ G +
Sbjct: 236 FERSPVK----DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQ 291
Query: 377 SNIITYNSLLDALCKSHHV--DKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+ + + + V DK + L+D + G ++ A
Sbjct: 292 TGALEQGKWIHGYINENRVTVDKVVG-----------------TALVDMYAKCGCIETAL 334
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRAL 494
EV ++ + ++T +I GL G+ AL L +ME+ G DAITF ++ A
Sbjct: 335 EVFYEIKER----DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC 390
Query: 495 FEKGENYKAEKLLREMMAR 513
G + K+ M R
Sbjct: 391 NHGGFVAEGRKIFHSMTER 409
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/521 (18%), Positives = 201/521 (38%), Gaps = 100/521 (19%)
Query: 46 TPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFS 105
TP ++ + K+L SL K ++ ++L +L G+ PD TL +++ ++
Sbjct: 8 TPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 106 VLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLC 165
V +K G + ++ +L+ G+++ + D + + + +S+ LI+
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYV 123
Query: 166 KMGQTRASLQLLRKI---------EGKLVKP--------------------------DVV 190
G+ ++ + +++ EG +V V
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+ N ++D CK + A ++ M +V + S+++G+ G++ EA L +
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRD----KNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
K DV + +++ + + + EA + M G++P+ SL+ G +
Sbjct: 240 PVK----DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGAL 295
Query: 311 NKAKYILNSMPQRGVT-------------------------------PNVQSYNTMINGL 339
+ K+I + + VT + S+ ++I GL
Sbjct: 296 EQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 340 CKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI-----DGLCKSNIITYNS---------- 384
M AL+L+ EM+ + + +TF +++ G ++S
Sbjct: 356 AMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPK 415
Query: 385 ------LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQ 438
L+D LC++ +D+A LI K+R + + V Y L+ G +K A+ V +
Sbjct: 416 SEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAE 475
Query: 439 DLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNG 479
L K +T++ + +++ + KM+D G
Sbjct: 476 K-LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLG 515
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 11/260 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPD-IVTLN 88
+D+ +F R SP ++ + ++ V+ + A+ L ++ GI PD V ++
Sbjct: 229 IDEARVLFER----SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+L C + + I + + + T L+ G ++TAL+ + +
Sbjct: 285 LLTGC-AQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 149 GFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDA 208
+ S+ +LI GL G + +L L ++E V+ D + + ++ + V +
Sbjct: 344 ----DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 209 FNLYSEMVAMR-ILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
++ M + P + LI C G L EA L+D+M ++ V Y L+
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 268 AFCKEGKVKEATNVLAVMMK 287
A G VK A V + K
Sbjct: 460 AARNYGNVKIAERVAEKLEK 479
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 61/380 (16%)
Query: 82 PDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQ-PNTITFTTLIKGLCLNGQVQTALQ 140
P++ N +I Y H + + ++L+K ++ P+ TF + K G Q
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 141 FHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLC 200
H H LCK G + VV N +ID
Sbjct: 131 VHGH-------------------LCKFGP----------------RFHVVTENALIDMYM 155
Query: 201 KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVY 260
K + DA ++ EM V+++NSL+ G+ +GQ+K+A L M+ K I
Sbjct: 156 KFDDLVDAHKVFDEMYER----DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI----V 207
Query: 261 TYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSM 320
++ ++ + G EA + M G++P+ ++ S++ + + K+I
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 321 PQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV--------------- 365
+RG N +I K ++ +A+ LF +M+ K+++ +
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 366 -TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIR-DQGIQPDVRTYNILMDG 423
TFN + K N IT+ LL A + + +R D I+P + Y L+D
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 424 LCEEGRLKNAQEVIQDLLTK 443
L G+L+ A E+ + + K
Sbjct: 388 LARAGKLERAVEITKTMPMK 407
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 142/347 (40%), Gaps = 36/347 (10%)
Query: 187 PDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRI-LPSVVTFNSLIYGFCIVGQLKEAIA 245
P+V +YN+II + ++L D +Y +++ LP TF + +G
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 246 LLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYC 305
+ + V T N L+D + K + +A V M ++ +V+++ SL+ GY
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYER----DVISWNSLLSGYA 186
Query: 306 LVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTV 365
+ ++ KAK + + M + + S+ MI+G I EA++ F EM I P+ +
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIV----SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 366 TFNSLI---------------------DGLCKSNIITYNSLLDALCKSHHVDKAIALIKK 404
+ S++ G K + N+L++ K + +AI L +
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC-NALIEMYSKCGVISQAIQLFGQ 301
Query: 405 IRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGL 464
+ + DV +++ ++ G G A E ++ T+ +++ G+
Sbjct: 302 MEGK----DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 465 FDEALTLLSKM-EDNGCMPDAITFETIIRALFEKGENYKAEKLLREM 510
+ E L M +D P + +I L G+ +A ++ + M
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 277 EATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMI 336
E + A ++ G+ + T ++D + +++ A + N + PNV YN++I
Sbjct: 25 EWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS----NPNVFLYNSII 80
Query: 337 NGLCKIKMVDEALNLFAEMDCKNI-VPNTVTFNSLIDG----------------LCKS-- 377
+ + + ++ ++ K+ +P+ TF + LCK
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 378 --NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+++T N+L+D K + A K+ D+ + DV ++N L+ G G++K A+
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDA----HKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 436 VIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALF 495
+ +L K T+ ++T MI+G G + EA+ +M+ G PD I+ +++ +
Sbjct: 197 LFHLMLDK----TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 496 EKG 498
+ G
Sbjct: 253 QLG 255
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 185/451 (41%), Gaps = 47/451 (10%)
Query: 68 AISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIK 127
A+ +H+L PD+ N ++ + S+ ++ K+G P+ TFT ++K
Sbjct: 61 ALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLK 120
Query: 128 GLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKP 187
FH VV GF LN+ LI G L + ++ K
Sbjct: 121 ACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGD----LGIASELFDDSAKA 176
Query: 188 DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALL 247
V ++++ K + +A L+ EM V +N +I G ++ A L
Sbjct: 177 HKVAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELF 232
Query: 248 DEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLV 307
D K DV T+N ++ + G KEA + M G P+VVT SL+ ++
Sbjct: 233 DRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL 288
Query: 308 SEVNKAK----YILNSMP-QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
++ K YIL + + +N +I+ K +D A+ +F + +++
Sbjct: 289 GDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL-- 346
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
T+N+LI GL AL HH + +I + ++++ + P+ T+ ++
Sbjct: 347 --STWNTLIVGL-------------AL---HHAEGSIEMFEEMQRLKVWPNEVTFIGVIL 388
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPV--TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGC 480
GR+ ++ L+ Y + ++ Y M++ L + G +EA + M+
Sbjct: 389 ACSHSGRVDEGRKYFS-LMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMK---I 444
Query: 481 MPDAITFETIIRALFEKGE----NYKAEKLL 507
P+AI + T++ A G Y EKLL
Sbjct: 445 EPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 221/515 (42%), Gaps = 86/515 (16%)
Query: 52 FGKILTSLVKMKHYSTAISLSH-QLEFTGITPDIVTLNILINCYCH-------------- 96
F K+L S +K K + + H + +G + +I N LI+ Y
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 97 -QAQITSAFSVLAKILKKGY------------QPNTITFTTLIKGLCLNGQVQTALQFHD 143
Q I + SV+ + K G+ + + T+ +++ G + + + AL +
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
+ +GF LN+ S+ ++++ + +Q+ I DV + + ++D K
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
V DA ++ EM +VV++NSLI F G EA+ + M+ + PD T
Sbjct: 202 NVNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++ A +K V ++K ++ +++ + +D Y S + +A++I +SMP
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSN---- 378
R NV + +MI+G A +F +M +N+ V++N+LI G ++
Sbjct: 318 R----NVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENEE 369
Query: 379 IITYNSLL--DALCKSHH----VDKAIALIKKIR----------------DQGIQPDVRT 416
++ LL +++C +H+ + KA A + ++ G + D+
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 417 YNILMD-----GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTL 471
N L+D G EEG L + + +D + ++ MI G + G +EAL L
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCV---------SWNAMIIGFAQNGYGNEALEL 480
Query: 472 LSKMEDNGCMPDAITFETIIRA-----LFEKGENY 501
+M ++G PD IT ++ A E+G +Y
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/529 (18%), Positives = 220/529 (41%), Gaps = 92/529 (17%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
+++D +F+++ P I + ++T L K+ A SL + D T N
Sbjct: 70 SLEDGRQVFDKM----PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP----ERDQCTWN 121
Query: 89 ILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQ 148
+++ + + A A + K+G+ N +F +++ + +Q H ++A+
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS-LIAK 180
Query: 149 GFHLNQISYGT-LINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTD 207
L+ + G+ L++ K G + ++ ++ + +VV +N++I ++ +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDR----NVVSWNSLITCFEQNGPAVE 236
Query: 208 AFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKN-INPDVYTYNILV 266
A +++ M+ R+ P VT S+I + +K + +V + + D+ N V
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFV 296
Query: 267 DAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVT 326
D + K ++KEA + M + NV+ TS++ GY + + A+ + M +R
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIR----NVIAETSMISGYAMAASTKAARLMFTKMAER--- 349
Query: 327 PNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC----------- 375
NV S+N +I G + +EAL+LF + +++ P +F +++
Sbjct: 350 -NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQA 408
Query: 376 ---------------KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNIL 420
+ +I NSL+D K V++ + +K+ ++ D ++N +
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM----MERDCVSWNAM 464
Query: 421 MDGLCEEGRLKNAQEVIQDLLTKG---------------------------YPVTVRT-- 451
+ G + G A E+ +++L G + R
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 452 -------YTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
YT M++ L + G +EA +++ +M PD++ + +++ A
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP---MQPDSVIWGSLLAA 570
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/364 (20%), Positives = 160/364 (43%), Gaps = 45/364 (12%)
Query: 169 QTRASLQLLRKIEGKLVKP----DVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
+++ S +R + ++K ++ + N +ID+ K + D ++ +M I
Sbjct: 31 KSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIY--- 87
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
T+NS++ G +G L EA +L M + D T+N +V F + + +EA A+
Sbjct: 88 -TWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
M K+G N ++ S++ ++++NK + + + + +V + +++ K
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLI-----DGLCKSNIITYNSLLDALCKSHHVDKA- 398
V++A +F EM +N+ V++NSLI +G + + +L++ + V A
Sbjct: 203 VNDAQRVFDEMGDRNV----VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLAS 258
Query: 399 -------IALIK--------KIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
++ IK +++ ++ D+ N +D + R+K A+ + + +
Sbjct: 259 VISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKA 503
V T MI+G A + +KM + + +++ +I + GEN +A
Sbjct: 319 ----NVIAETSMISGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQNGENEEA 370
Query: 504 EKLL 507
L
Sbjct: 371 LSLF 374
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/425 (19%), Positives = 174/425 (40%), Gaps = 58/425 (13%)
Query: 117 PNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQL 176
P +I F ++ L + + + + F+ + G L+Q S+ ++ + K+ ++L
Sbjct: 74 PESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMEL 133
Query: 177 -------------------------------LRKIEGKLVKPDVVMYNTIIDSLCKDTLV 205
R + ++ DVV +NT+I+ C+ LV
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 206 TDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNIL 265
+AF L+ EM ++P + +++ G ++ A+ + ++ ++ D + L
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 266 VDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGV 325
V + G + A M + N+ T+++ GY ++ A+ I + ++ +
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVR----NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 326 TPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSL 385
+ TMI+ + EAL +F EM C I P+ V+ S+I I+
Sbjct: 310 V----CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGIL----- 360
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGY 445
DKA + I G++ ++ N L++ + G L ++V + + +
Sbjct: 361 ----------DKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR-- 408
Query: 446 PVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEK 505
V +++ MIN L G +AL+L ++M+ P+ +TF ++ G + +K
Sbjct: 409 --NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 506 LLREM 510
+ M
Sbjct: 467 IFASM 471
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/462 (18%), Positives = 196/462 (42%), Gaps = 54/462 (11%)
Query: 36 IFNRLLR-----MSPTPPIIEFGKI---------LTSLVKMKHYSTAISLSHQLEFTGIT 81
+FN LR P I+ + +I + L +K S +L +E G+
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 82 PDIVTL------NILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQV 135
I TL ++ Y +I A +V ++ + + +T+ T+I+ C G V
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLV 193
Query: 136 QTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTI 195
A + + + +++ +++ + G R + R I L++ DV M +
Sbjct: 194 DEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYN----RAIYEFLIENDVRMDTHL 249
Query: 196 IDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNI 255
+ +L ++ E + ++ +++ G+ G+L +A + D+ K
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK-- 307
Query: 256 NPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKY 315
D+ + ++ A+ + +EA V M G+KP+VV+ S++ + ++KAK+
Sbjct: 308 --DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 316 ILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLC 375
+ + + G+ + N +IN K +D ++F +M
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP------------------- 406
Query: 376 KSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
+ N+++++S+++AL A++L +++ + ++P+ T+ ++ G G ++ ++
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 436 VIQDLLTKGYPVT--VRTYTIMINGLCKEGLFDEALTLLSKM 475
+ +T Y +T + Y M++ + L EAL ++ M
Sbjct: 467 IFAS-MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 16/298 (5%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D+V +I+ Y A V ++ G +P+ ++ ++I G + A H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ G LIN K G L R + K+ + +VV ++++I++L
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCG----GLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYT 261
+DA +L++ M + P+ VTF ++YG G ++E + M + NI P +
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 262 YNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN----KAKYIL 317
Y +VD F + ++EA V+ M V NVV + SLM + E+ AK IL
Sbjct: 484 YGCMVDLFGRANLLREALEVIESM---PVASNVVIWGSLMSACRIHGELELGKFAAKRIL 540
Query: 318 NSMPQRG----VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
P + N+ + + I+ V E N+F E I N + LI
Sbjct: 541 ELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLI 598
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 183/427 (42%), Gaps = 72/427 (16%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D+V +I Y A+ +++K+G PN T ++++K C N +V
Sbjct: 75 DVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS-CRNMKV------- 126
Query: 143 DHVVAQGFHLNQISYGTLINGLC-KMGQTRASLQLLRKIEGKLVKPDVVM--YNTIIDSL 199
++YG L++G+ K+G +EG L + +M Y T ++
Sbjct: 127 ------------LAYGALVHGVVVKLG-----------MEGSLYVDNAMMNMYATCSVTM 163
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
L+ + ++ VT+ +LI GF +G + + +M+ +N
Sbjct: 164 EAACLIFRDIKVKND----------VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP 213
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
Y I V A V + A ++K+G + N+ S++D YC +++AK+ +
Sbjct: 214 YCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHE 273
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
M + ++ ++NT+I+ L + EAL +F + + VPN TF SL+ C +NI
Sbjct: 274 MEDK----DLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLV-AAC-ANI 326
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQD 439
N C L +I +G +V N L+D + G + ++Q V +
Sbjct: 327 AALN------CGQQ-------LHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 440 LLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA-----L 494
++ + V ++T M+ G G EA+ L KM +G PD I F ++ A L
Sbjct: 374 IVDRRNLV---SWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL 430
Query: 495 FEKGENY 501
EKG Y
Sbjct: 431 VEKGLKY 437
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 121/264 (45%), Gaps = 13/264 (4%)
Query: 79 GITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTA 138
G ++ +N +++ YC ++ A ++ K + IT+ TLI L + +
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK----DLITWNTLISELERSDSSEAL 298
Query: 139 LQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDS 198
L F +QGF N ++ +L+ + QL +I + +V + N +ID
Sbjct: 299 LMFQ-RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 199 LCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPD 258
K + D+ ++ E+V R ++V++ S++ G+ G EA+ L D+MV+ I PD
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRR---NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPD 414
Query: 259 VYTYNILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ ++ A G V++ VM + G+ P+ Y ++D ++ +A ++
Sbjct: 415 RIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELV 474
Query: 318 NSMPQRGVTPNVQSYNTMINGLCK 341
MP + P+ ++ ++ G CK
Sbjct: 475 ERMPFK---PDESTWGAIL-GACK 494
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 24/256 (9%)
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNV 281
+V + N+L++ + KEA + EM I PD+ TYN ++ C+ G + ++
Sbjct: 145 TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSI 204
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
+A M ++ +KP ++ ++DG+ + ++ + ++ M + GV V +YN MI LCK
Sbjct: 205 VAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCK 264
Query: 342 IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGL--CK--SNIITYNSLLDALCKSHHVDK 397
K EA +LIDG+ C+ N +TY+ L+ C ++D+
Sbjct: 265 RKKSAEA-------------------KALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDE 305
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMIN 457
A+ L + + G +PD Y L+ LC+ G + A + ++ + K + + ++N
Sbjct: 306 AMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
Query: 458 GLCKEGLFDEALTLLS 473
GL DEA L++
Sbjct: 366 GLASRSKVDEAKELIA 381
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%)
Query: 185 VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAI 244
++PD+ YN +I LC+ + ++++ +EM I P+ +F +I GF + E
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 245 ALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGY 304
++ M ++ V TYNI++ CK K EA ++ +M ++PN VTY+ L+ G+
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 305 CLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNT 364
C +++A + M G P+ + Y T+I+ LCK + AL L E KN VP+
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 365 VTFNSLIDGLCKSNIITYNSLLDALCK 391
L++GL + + L A+ K
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVK 384
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 111/238 (46%), Gaps = 22/238 (9%)
Query: 292 PNVVTYTSLMDGYCLVS-EVNKAKYILNSMPQ-RGVTPNVQSYNTMINGLCKIKMVDEAL 349
P V + + CL++ + +A + MP+ G+ P++++YN MI LC+ +
Sbjct: 143 PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSY 202
Query: 350 NLFAEMDCKNIVPNTVTFNSLIDGLCKSN--------------------IITYNSLLDAL 389
++ AEM+ K I P +F +IDG K + TYN ++ L
Sbjct: 203 SIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCL 262
Query: 390 CKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTV 449
CK +A ALI + ++P+ TY++L+ G C E L A + + ++ GY
Sbjct: 263 CKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDS 322
Query: 450 RTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
Y +I+ LCK G F+ AL L + + +P + ++ L + + +A++L+
Sbjct: 323 ECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELI 380
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%)
Query: 156 SYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM 215
+Y +I LC+ G T +S ++ ++E K +KP + +ID K+ + + M
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 216 VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ V T+N +I C + EA AL+D +++ + P+ TY++L+ FC E +
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
EA N+ VM+ G KP+ Y +L+ C + A + ++ P+ +
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 363
Query: 336 INGLCKIKMVDEALNLFA 353
+NGL VDEA L A
Sbjct: 364 VNGLASRSKVDEAKELIA 381
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 114 GYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRAS 173
G +P+ T+ +I+ LC +G ++ + + S+G +I+G K +
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYG 233
+++R ++ V V YN +I LCK +A L +++ R+ P+ VT++ LI+G
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHG 296
Query: 234 FCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPN 293
FC L EA+ L + MV PD Y L+ CK G + A + M++ P+
Sbjct: 297 FCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPS 356
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGL 339
L++G S+V++AK ++ + ++ T NV +N + L
Sbjct: 357 FSVMKWLVNGLASRSKVDEAKELIAVVKEK-FTRNVDLWNEVEAAL 401
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P FG ++ K + + + ++ G+ + T NI+I C C + + A ++
Sbjct: 215 PTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKAL 274
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ ++ +PN++T++ LI G C + A+ + +V G+ + Y TLI+ LCK
Sbjct: 275 IDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCK 334
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNL 211
G +L L R+ K P + +++ L + V +A L
Sbjct: 335 GGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 3/213 (1%)
Query: 47 PPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSV 106
P + + +++ L + S++ S+ ++E I P + ++I+ + + + V
Sbjct: 180 PDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 107 LAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCK 166
+ + + G T+ +I+ LC + A D V++ N ++Y LI+G C
Sbjct: 240 MRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCS 299
Query: 167 MGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVT 226
++ L + KPD Y T+I LCK A L E + +PS
Sbjct: 300 EENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSV 359
Query: 227 FNSLIYGFCI---VGQLKEAIALLDEMVTKNIN 256
L+ G V + KE IA++ E T+N++
Sbjct: 360 MKWLVNGLASRSKVDEAKELIAVVKEKFTRNVD 392
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 381 TYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
TYN ++ LC+S + +++ ++ + I+P ++ +++DG +E + ++V++ +
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 441 LTKGYPVTVRTYTIMI-----------------------------------NGLCKEGLF 465
G V V TY IMI +G C E
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 466 DEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGLL 516
DEA+ L M NG PD+ + T+I L + G+ A L RE M + +
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWV 354
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++ L K K + A +L + + P+ VT ++LI+ +C + + A ++ ++ G
Sbjct: 258 MIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASL 174
Y+P++ + TLI LC G +TAL + + + + L+NGL + +
Sbjct: 318 YKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK 377
Query: 175 QLLRKIEGKLVKPDVVMYNTIIDSL 199
+L+ ++ K + +V ++N + +L
Sbjct: 378 ELIAVVKEKFTR-NVDLWNEVEAAL 401
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 200/476 (42%), Gaps = 72/476 (15%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
++VT LI+ Y + ++ ++ +G QPN+ TF + L G LQ H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
VV G +LIN K G R + L K E K VV +N++I +
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAAN 273
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLI---------------------YGFCIVGQLK 241
L +A ++ M + S +F S+I YGF ++
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 242 EAI--------ALLDEM-VTKNIN--PDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
A+ A+LD + + K I +V ++ ++ F + +EA ++ + M ++GV
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 291 KPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALN 350
+PN TY+ ++ ++S ++ + +R T +++ K+ V+EA
Sbjct: 394 RPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGT----ALLDAYVKLGKVEEAAK 449
Query: 351 LFAEMDCKNIVPNTVT----------------FNSLIDGLCKSNIITYNSLLDALCKSHH 394
+F+ +D K+IV + F L G K N T++S+L+ +C +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAA-- 506
Query: 395 VDKAIALIKKIRDQGIQPDVRTY----NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVR 450
+ ++ K+ I+ + + + L+ ++G +++A+EV + K +
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK----DLV 562
Query: 451 TYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA-----LFEKGENY 501
++ MI+G + G +AL + +M+ D +TF + A L E+GE Y
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/524 (20%), Positives = 199/524 (37%), Gaps = 133/524 (25%)
Query: 31 DDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNIL 90
D+V+++F R+ P F L L + + + + G+ I N L
Sbjct: 176 DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 235
Query: 91 INCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGF 150
IN Y + A + K K + +T+ ++I G NG AL +
Sbjct: 236 INLYLKCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 151 HLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID---------SLCK 201
L++ S+ ++I LC A+L+ LR E + VV Y + D + K
Sbjct: 292 RLSESSFASVIK-LC------ANLKELRFTE--QLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 202 DTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYT 261
T + DA L+ E+ + +VV++ ++I GF +EA+ L EM K + P+ +T
Sbjct: 343 CTAMLDALRLFKEIGC---VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 262 YNI-------------------------------LVDAFCKEGKVKEATNVL-------- 282
Y++ L+DA+ K GKV+EA V
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 283 ------------------AVMM-----KQGVKPNVVTYTSLMD----------------G 303
A+ M K G+KPN T++S+++ G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 304 YCLVSEVNKA----KYILNSMPQRGVTPNVQ------------SYNTMINGLCKIKMVDE 347
+ + S ++ + +L ++G + + S+N+MI+G + +
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMK 579
Query: 348 ALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
AL++F EM + + + VTF + + ++ +K ++ +RD
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLV------------EEGEKYFDIM--VRD 625
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRT 451
I P + ++D G+L+ A +VI+++ RT
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/398 (18%), Positives = 172/398 (43%), Gaps = 43/398 (10%)
Query: 140 QFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSL 199
Q H + GF L+ +S GT + G ++ + RK+ ++ + +VV + T+I
Sbjct: 114 QLHCQCIKFGF-LDDVSVGTSLVDTYMKG---SNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 200 CKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDV 259
++++ + L+ M P+ TF + + G + + +V ++ +
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 260 YTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNS 319
N L++ + K G V++A ++ + +VVT+ S++ GY +A + S
Sbjct: 230 PVSNSLINLYLKCGNVRKAR----ILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN----------- 368
M V + S+ ++I +K L ++ C ++V F+
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLK----ELRFTEQLHC-SVVKYGFLFDQNIRTALMVAY 340
Query: 369 ----SLIDGL-------CKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTY 417
+++D L C N++++ +++ ++ ++A+ L +++ +G++P+ TY
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 418 NILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMED 477
++++ L + + EV ++ Y + T +++ K G +EA + S ++D
Sbjct: 401 SVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 478 NGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
D + + ++ + GE A K+ E+ G+
Sbjct: 457 K----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 44/311 (14%)
Query: 221 LPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATN 280
++ ++NS++ G+ G KEA L DEM +N V ++N LV + K + EA N
Sbjct: 45 FKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERN----VVSWNGLVSGYIKNRMIVEARN 100
Query: 281 VLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLC 340
V +M ++ NVV++T+++ GY V +A+ + MP+R N S+ M GL
Sbjct: 101 VFELMPER----NVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLI 152
Query: 341 KIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------NIITYNS 384
+D+A L+ M K++V +T ++I GLC+ N++T+ +
Sbjct: 153 DDGRIDKARKLYDMMPVKDVVAST----NMIGGLCREGRVDEARLIFDEMRERNVVTWTT 208
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKG 444
++ +++ VD A L + + + + +V ++L+ G GR+++A+E + + K
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPE---KTEVSWTSMLL-GYTLSGRIEDAEEFFEVMPMK- 263
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAE 504
PV MI G + G +A + MED D T+ +I+A KG +A
Sbjct: 264 -PVI--ACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEAL 316
Query: 505 KLLREMMARGL 515
L +M +G+
Sbjct: 317 DLFAQMQKQGV 327
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 47/411 (11%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
++V+ N L++ Y I A +V + ++ N +++T ++KG G V A
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMVGEAESLF 133
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ + N++S+ + GL G+ + RK+ + DVV +I LC++
Sbjct: 134 WRMPER----NEVSWTVMFGGLIDDGR----IDKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
V +A ++ EM +VVT+ ++I G+ ++ A L + M K ++
Sbjct: 186 GRVDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKT----EVSW 237
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++ + G++++A VM +KP V+ +++ G+ V E++KA+ + + M
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVM---PMKP-VIACNAMIVGFGEVGEISKARRVFDLMED 293
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
R + ++ MI + EAL+LFA+M + + P +F SLI +I++
Sbjct: 294 R----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP---SFPSLI------SILSV 340
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ L +L V + +R Q DV ++LM + G L A+ V +
Sbjct: 341 CATLASLQYGRQVHAHL-----VRCQ-FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 443 KGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
K + + +I+G GL +EAL + +M +G MP+ +T I+ A
Sbjct: 395 K----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/373 (19%), Positives = 162/373 (43%), Gaps = 34/373 (9%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
++VT +I Y ++ V K+ + + +++T+++ G L+G+++ A +F
Sbjct: 202 NVVTWTTMITGYRQNNRV----DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+ + + I+ +I G ++G+ + ++ +E + D + +I + +
Sbjct: 258 EVMPMKPV----IACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERK 309
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
+A +L+++M + PS + S++ + L+ + +V + DVY
Sbjct: 310 GFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA 369
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++L+ + K G++ +A V + +++ + S++ GY +A I + MP
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPS 425
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
G PN + ++ ++E L +F M+ K V TV Y
Sbjct: 426 SGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH--------------Y 471
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT 442
+ +D L ++ VDKA+ LI+ + I+PD + L+ G C+ + EV L
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMT---IKPDATVWGALL-GACKTHSRLDLAEVAAKKLF 527
Query: 443 KGYPVTVRTYTIM 455
+ P TY ++
Sbjct: 528 ENEPDNAGTYVLL 540
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 114/262 (43%), Gaps = 13/262 (4%)
Query: 45 PTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAF 104
P P+I ++ ++ S A + +E D T +I Y + A
Sbjct: 261 PMKPVIACNAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFELEAL 316
Query: 105 SVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGL 164
+ A++ K+G +P+ + +++ +Q Q H H+V F + L+
Sbjct: 317 DLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMY 376
Query: 165 CKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSV 224
K G+ + + + K D++M+N+II L +A ++ EM + +P+
Sbjct: 377 VKCGELVKAKLVFDRFSSK----DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNK 432
Query: 225 VTFNSLIYGFCIVGQLKEAIALLDEMVTKN-INPDVYTYNILVDAFCKEGKVKEATNVLA 283
VT +++ G+L+E + + + M +K + P V Y+ VD + G+V +A ++
Sbjct: 433 VTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE 492
Query: 284 VMMKQGVKPNVVTYTSLMDGYC 305
M +KP+ + +L+ G C
Sbjct: 493 SMT---IKPDATVWGALL-GAC 510
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 151/358 (42%), Gaps = 26/358 (7%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D+V+ N LIN Y + A V + +G +P+ +T L+ + G + +F+
Sbjct: 221 DLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
++V G + L+N L M + R+I L K +V + T+I +
Sbjct: 281 EYVKENGLRMTI----PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARC 336
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
L+ + L+ +M VV +N++I G + ++A+AL EM T N PD T
Sbjct: 337 GLLDVSRKLFDDMEE----KDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITM 392
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
+ A + G + + + K + NV TSL+D Y +++A + + +
Sbjct: 393 IHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT 452
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
R N +Y +I GL A++ F EM I P+ +TF L+ C +I
Sbjct: 453 R----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 383 NSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
+ KS + P ++ Y+I++D L G L+ A +++ +
Sbjct: 509 GRDYFSQMKSRF--------------NLNPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 109/507 (21%), Positives = 209/507 (41%), Gaps = 79/507 (15%)
Query: 68 AISLSHQLEFT-----GI-TPDIVTLNILINCYCHQAQITSAFSVLAKILKKG---YQPN 118
A+S S L+++ GI P+I + N+ I + +F + ++L+ G +P+
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 119 TITFTTLIKGLCLNGQVQT-ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
T+ L K +C + ++ + HV+ L +S+ + N M + ++
Sbjct: 156 HFTYPVLFK-VCADLRLSSLGHMILGHVLK--LRLELVSH--VHNASIHMFASCGDMENA 210
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
RK+ + D+V +N +I+ K A +Y M + + P VT L+ ++
Sbjct: 211 RKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSML 270
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
G L + + + + N L+D F K G + EA + + K+ +V++
Sbjct: 271 GDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSW 326
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDC 357
T+++ GY ++ ++ + + M ++ +V +N MI G + K +AL LF EM
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 358 KNIVPNTVTF-----------------------------------NSLID---------- 372
N P+ +T SL+D
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 373 ------GLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCE 426
G+ N +TY +++ L AI+ ++ D GI PD T+ L+ C
Sbjct: 443 ALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCH 502
Query: 427 EGRLKNAQEVIQDLLTK-GYPVTVRTYTIMINGLCKEGLFDEALTLLSK--MEDNGCMPD 483
G ++ ++ + ++ ++ Y+IM++ L + GL +EA L+ ME + +
Sbjct: 503 GGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWG 562
Query: 484 AITFETIIRALFEKGENYKAEKLLREM 510
A+ F + E GE KA K L E+
Sbjct: 563 ALLFGCRMHGNVELGE--KAAKKLLEL 587
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/465 (19%), Positives = 180/465 (38%), Gaps = 113/465 (24%)
Query: 150 FHLNQISYGTLINGL-------------CKMGQTRA---SLQLLRKIEGKLVKPDVVMYN 193
HL QI +INGL C + ++R S+++L+ IE P++ +N
Sbjct: 67 LHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIE----NPNIFSWN 122
Query: 194 TIIDSLCKDTLVTDAFNLYSEMV-----------------------------AMRILPSV 224
I + ++F LY +M+ IL V
Sbjct: 123 VTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHV 182
Query: 225 VTF---------NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKV 275
+ N+ I+ F G ++ A + DE + D+ ++N L++ + K G+
Sbjct: 183 LKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIGEA 238
Query: 276 KEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTM 335
++A V +M +GVKP+ VT L+ ++ ++N+ K + + G+ + N +
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 336 INGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNS------------LIDGLCKSNIITYN 383
++ K + EA +F ++ + IV T + L D + + +++ +N
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 384 SLLDALCKSHHVDKAIALIKKIRDQGIQPD--------------------------VRTY 417
+++ ++ A+AL ++++ +PD + Y
Sbjct: 359 AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKY 418
Query: 418 NI---------LMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA 468
++ L+D + G + A V + T+ TYT +I GL G A
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTA 474
Query: 469 LTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
++ ++M D G PD ITF ++ A G +M +R
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 186/439 (42%), Gaps = 35/439 (7%)
Query: 44 SPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSA 103
SP ++ + ++ K+ AI + +E G+ PD VT+ L++ +
Sbjct: 217 SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRG 276
Query: 104 FSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLING 163
+ + G + L+ G + A + D++ + +S+ T+I+G
Sbjct: 277 KEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI----VSWTTMISG 332
Query: 164 LCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPS 223
+ G S +L +E K DVV++N +I + DA L+ EM P
Sbjct: 333 YARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 224 VVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLA 283
+T + +G L I + + +++ +V LVD + K G + EA +V
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVF- 447
Query: 284 VMMKQGVKP-NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
G++ N +TYT+++ G L + + A N M G+ P+ ++ +++ C
Sbjct: 448 ----HGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHG 503
Query: 343 KMVDEALNLFAEMDCK-NIVPNTVTFNSLIDGLCKSNII-TYNSLLDAL----------- 389
M+ + F++M + N+ P ++ ++D L ++ ++ + L++++
Sbjct: 504 GMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGA 563
Query: 390 ----CKSH-HVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL-KNAQEVIQDLLTK 443
C+ H +V+ KK+ + + P +L+DG+ E + ++A+ + + +
Sbjct: 564 LLFGCRMHGNVELGEKAAKKLLE--LDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNER 621
Query: 444 GYPVTVRTYTIMINGLCKE 462
G +I +NG+ E
Sbjct: 622 GVEKIPGCSSIEVNGIVCE 640
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 172/409 (42%), Gaps = 63/409 (15%)
Query: 85 VTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDH 144
V N +I Y H + + + GY + TFT+L+ + ++ QFH
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 145 VVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTL 204
++ + N L++ K G +L+ R+I ++ D V +NTII S +D
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCG----ALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 205 VTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNI 264
++AF+L+ M I+ G C+ LK + + +
Sbjct: 510 ESEAFDLFKRMNLCGIVSD---------GACLASTLKAC---------------THVHGL 545
Query: 265 LVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRG 324
+GK V + +K G+ ++ T +SL+D Y + A+ + +S+P+
Sbjct: 546 Y------QGK-----QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 325 VTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNS 384
V S N +I G + + +EA+ LF EM + + P+ +TF ++++ K +T +
Sbjct: 595 VV----SMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 385 LLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR-LKNAQEVIQDLLTK 443
+I +G + I + G+ R + A + +L +
Sbjct: 650 QFHG---------------QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS- 693
Query: 444 GYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIR 492
P ++ +T M++G + G ++EAL +M +G +PD TF T++R
Sbjct: 694 --PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 159/366 (43%), Gaps = 36/366 (9%)
Query: 158 GTLINGLCKMGQTRASLQLLRKIEGKLVK---------PDVVMYNTIIDSLCKDTLVTDA 208
G + +G C +A + +GK V D+ +++ID K ++ DA
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 209 FNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDA 268
++S + SVV+ N+LI G+ L+EA+ L EM+T+ +NP T+ +V+A
Sbjct: 584 RKVFSSLPEW----SVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 269 FCKEGKVKEATNVLAVMMKQGVKP-NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTP 327
K + T + K+G SL+ Y + +A + + +
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS---PK 695
Query: 328 NVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLD 387
++ + M++G + +EAL + EM ++P+ TF +++ +C S+L
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR-VC--------SVLS 746
Query: 388 ALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPV 447
+L + + I + D+ T N L+D + G +K + +V ++ +
Sbjct: 747 SLREGRAIHSLIFHLAHDLDE------LTSNTLIDMYAKCGDMKGSSQVFDEMRRRS--- 797
Query: 448 TVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLL 507
V ++ +ING K G ++AL + M + MPD ITF ++ A G+ K+
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 508 REMMAR 513
M+ +
Sbjct: 858 EMMIGQ 863
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/461 (18%), Positives = 185/461 (40%), Gaps = 37/461 (8%)
Query: 53 GKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILK 112
G++ ++V + +S + + +F + D+ N +++ Y + + +
Sbjct: 95 GRLGNAIVDLYAKCAQVSYAEK-QFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 113 KGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRA 172
PN TF+ ++ V+ Q H ++ G N G L++ K +
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 173 SLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIY 232
+ R++ +V P+ V + + K L +A ++ M P + F ++I
Sbjct: 214 A----RRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 233 GFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKP 292
+ +G+LK+A L EM + PDV +N+++ K G A M K VK
Sbjct: 270 TYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 293 NVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLF 352
T S++ +V+ ++ + + G+ N+ +++++ K + ++ A +F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 353 AEMDCKNIVPNTVTFNSLIDGLCKS------------------NI--ITYNSLLDALCKS 392
++ K N V +N++I G + NI T+ SLL S
Sbjct: 386 EALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAAS 441
Query: 393 HHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTY 452
H ++ I + + ++ N L+D + G L++A+++ + + + T+
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV----TW 497
Query: 453 TIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRA 493
+I ++ EA L +M G + D + ++A
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 176/392 (44%), Gaps = 41/392 (10%)
Query: 29 NVDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLN 88
N+++ V +F +L P I F I+ + K + + Q+ G + + L
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 89 I-LINCYCHQAQITSAFSVLAKILKKGYQPNTIT-FTTLIKGLCLNGQVQTALQFHDHVV 146
I L+ Y + +T A ++ +++ P +I +T ++ G NG + AL+F+ +
Sbjct: 669 ISLLGMYMNSRGMTEACALFSEL----SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMR 724
Query: 147 AQGFHLNQISYGTLI---NGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
G +Q ++ T++ + L + + RA L+ + L D + NT+ID K
Sbjct: 725 HDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDL---DELTSNTLIDMYAKCG 781
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ + ++ EM R +VV++NSLI G+ G ++A+ + D M +I PD T+
Sbjct: 782 DMKGSSQVFDEM---RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFL 838
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQ-GVKPNVVTYTSLMDGYCLVSEVNKAKYILNS--- 319
++ A GKV + + +M+ Q G++ V C+V + + Y+ +
Sbjct: 839 GVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA------CMVDLLGRWGYLQEADDF 892
Query: 320 MPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNI 379
+ + + P+ + +++++ G C+I D + ++ LI+ L N
Sbjct: 893 IEAQNLKPDARLWSSLL-GACRIHGDD--------------IRGEISAEKLIE-LEPQNS 936
Query: 380 ITYNSLLDALCKSHHVDKAIALIKKIRDQGIQ 411
Y L + +KA AL K +RD+G++
Sbjct: 937 SAYVLLSNIYASQGCWEKANALRKVMRDRGVK 968
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 299 SLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCK 358
+++D Y ++V+ A+ + + + +V ++N+M++ I + L F +
Sbjct: 100 AIVDLYAKCAQVSYAEKQFDFLEK-----DVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 359 NIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYN 418
I PN TF+ ++ + + + + ++IK G++ +
Sbjct: 155 QIFPNKFTFSIVLSTCARETNVEFGRQIHC-----------SMIK----MGLERNSYCGG 199
Query: 419 ILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDN 478
L+D + R+ +A+ V + ++ P TV +T + +G K GL +EA+ + +M D
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVD---PNTV-CWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 479 GCMPDAITFETIIRALFEKGENYKAEKLLREM 510
G PD + F T+I G+ A L EM
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 52/319 (16%)
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA 217
+ I+ L + G+ + K+E +K D ++ LC+ + A + A
Sbjct: 180 SAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN-TA 238
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKE 277
I P + LI G+CI +L EA L EM YN+++D CK + K
Sbjct: 239 NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK- 297
Query: 278 ATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMIN 337
D + L EV K +L M RGV N +++N +IN
Sbjct: 298 ------------------------DPFKLQPEVEK---VLLEMEFRGVPRNTETFNVLIN 330
Query: 338 GLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS-------------------- 377
LCKI+ +EA+ LF M P+ T+ LI L ++
Sbjct: 331 NLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGE 390
Query: 378 --NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQE 435
N Y L LC ++ A+++ K ++ G +P ++TY++LM +C +L A
Sbjct: 391 LLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANG 450
Query: 436 VIQDLLTKGYPVTVRTYTI 454
+ ++ KG V+ + Y +
Sbjct: 451 LYKEAAKKGIAVSPKEYRV 469
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 133/300 (44%), Gaps = 26/300 (8%)
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNVLAV 284
T S I G+ K+ ++M + D + ++V C++G A ++
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 285 MMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI-- 342
+ + P+ L+ G+C+ ++++A + M + G ++YN M++ +CK+
Sbjct: 237 TANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 343 -----KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDK 397
K+ E + EM+ + + NT TFN LI + LCK ++
Sbjct: 296 KKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLI---------------NNLCKIRRTEE 340
Query: 398 AIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYP--VTVRTYTIM 455
A+ L ++ + G QPD TY +L+ L + R+ E+I + + GY + + Y
Sbjct: 341 AMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGF 400
Query: 456 INGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
+ LC + A+++ M+ NGC P T++ ++ + + +A L +E +G+
Sbjct: 401 LKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 74 QLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNG 133
++EF G+ + T N+LIN C + A ++ ++ + G QP+ T+ LI+ L
Sbjct: 312 EMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAA 371
Query: 134 QVQTALQFHDHVVAQGFH--LNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVM 191
++ + D + + G+ LN+ Y + LC + + ++ + + ++ KP +
Sbjct: 372 RIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKT 431
Query: 192 YNTIIDSLCKDTLVTDAFNLYSE 214
Y+ ++ +C + +T A LY E
Sbjct: 432 YDLLMGKMCANNQLTRANGLYKE 454
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 80 ITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTAL 139
I PD ++LI+ +C ++ A + ++ + G++ T + ++ +C + +
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPF 300
Query: 140 QFHDHVVA-------QGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMY 192
+ V +G N ++ LIN LCK+ +T ++ L ++ +PD Y
Sbjct: 301 KLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETY 360
Query: 193 NTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI-----YGF----CIVGQLKEA 243
+I SL + + + + +M + + L+ YGF C + +L+ A
Sbjct: 361 LVLIRSLYQAARIGEGDEMIDKMKS-------AGYGELLNKKEYYGFLKILCGIERLEHA 413
Query: 244 IALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
+++ M P + TY++L+ C ++ A + K+G+
Sbjct: 414 MSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/495 (21%), Positives = 203/495 (41%), Gaps = 102/495 (20%)
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
IV+ +I+ Y +++ A+ V ++ + T +IK C G+ A +
Sbjct: 81 IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGK---AYELFC 137
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
+ + N +SY T+I G + G+ + L + K D V N ++ +
Sbjct: 138 DIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVKF--RDSVASNVLLSGYLRAG 191
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+A ++ M + VV+ +S+++G+C +G++ +A +L D M +N V T+
Sbjct: 192 KWNEAVRVFQGMA----VKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERN----VITWT 243
Query: 264 ILVDAFCK----------------EGKVKEATNVLAVMMK--------------QGVKPN 293
++D + K EG VK +N LAVM K G+
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSR 303
Query: 294 VVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQS--YNTMINGLCKIKMVDEALNL 351
+ L G L+S +K Y+ + GV N S +N++I GL + K + EA L
Sbjct: 304 MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYEL 363
Query: 352 FAEMDCKNIVPNTVTFNSLIDGLC----------------KSNIITYNSLLDALCKSHHV 395
F +M K++V ++ +I G + + IT+ +++ A + +
Sbjct: 364 FEKMPGKDMV----SWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 396 DKAIALIKKIRDQGIQPDVRTYNI----------LMDGLCEEGRLKNAQEVIQDLLTKGY 445
++A+ K+ + + P+ T++ L++GL GR+ ++ DL +
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK-MNIVNDLSVQNS 478
Query: 446 PVT----------------------VRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPD 483
V+ + +Y MI+G G +AL L S +E +G P+
Sbjct: 479 LVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Query: 484 AITFETIIRALFEKG 498
+TF ++ A G
Sbjct: 539 GVTFLALLSACVHVG 553
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 28/292 (9%)
Query: 153 NQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLY 212
+ +S+ +LI GL + Q + +L K+ GK D+V + +I ++ L+
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF 395
Query: 213 SEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKE 272
M +T+ ++I F G +EA+ +M+ K + P+ YT++ ++ A
Sbjct: 396 GMMPE----KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 273 GKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSY 332
+ E + ++K + ++ SL+ YC N A I + + + PN+ SY
Sbjct: 452 ADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVSY 507
Query: 333 NTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKS 392
NTMI+G +AL LF+ ++ PN VTF +LL A
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF---------------LALLSACVHV 552
Query: 393 HHVDKAIALIKKIRDQ-GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTK 443
+VD K ++ I+P Y ++D L G L +A +I + K
Sbjct: 553 GYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCK 604
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 143/329 (43%), Gaps = 59/329 (17%)
Query: 50 IEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAK 109
+ + ++T LV+ K S A L ++ D+V+ +I + + +I+ +
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 110 ILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQ 169
+ +K + IT+T +I NG + AL + ++ + N ++ ++++ +
Sbjct: 398 MPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 170 TRASLQLLRKIEGKLVKPDVV----MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVV 225
LQ I G++VK ++V + N+++ CK DA+ ++S + P++V
Sbjct: 454 LIEGLQ----IHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIV 505
Query: 226 TFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVM 285
++N++I G Y+YN G K+A + +++
Sbjct: 506 SYNTMISG--------------------------YSYN---------GFGKKALKLFSML 530
Query: 286 MKQGVKPNVVTYTSLMDGYCLVSEVN-KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKM 344
G +PN VT+ +L+ V V+ KY + + P Y M++ L + +
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGL 590
Query: 345 VDEALNLFAEMDCKNIVPNTVTFNSLIDG 373
+D+A NL + M CK P++ + SL+
Sbjct: 591 LDDASNLISTMPCK---PHSGVWGSLLSA 616
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 189/422 (44%), Gaps = 27/422 (6%)
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
++ SA + + G QPN + + L NG +Q A + + + ++ +Y
Sbjct: 122 KVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKE-NVTGHTYS 180
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKP---DVVMYNTIIDSLC-KDTLVTDAFNLYSE 214
++ + ++ ++L++ R++E + + DVV+YNT I SLC + V + ++
Sbjct: 181 LMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAI-SLCGRINNVYETERIWRV 239
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
M + + +T++ L+ F G+ + A+ + DEMV I+ ++ A KE K
Sbjct: 240 MKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK 299
Query: 275 VKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNT 334
A + M+K+G+KPN+V +L++ +V + + + G P+ ++N
Sbjct: 300 WDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNA 359
Query: 335 MINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHH 394
++ L K ++ L LF + +N LC N YN+ + + K +
Sbjct: 360 LLTALYKANRYEDVLQLFDMIRSEN--------------LCCLNEYLYNTAMVSCQKLGY 405
Query: 395 VDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGR-LKNAQEVIQDLLTKGYPVTVRTYT 453
+KA+ L+ ++ G+ +YN+++ CE+ R K A V + + + TY
Sbjct: 406 WEKAVKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTFTYL 464
Query: 454 IMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMAR 513
++ L+DE +L K+E PD + I + + E A++L +M
Sbjct: 465 SLVRSCIWGSLWDEVEDILKKVE-----PDVSLYNAAIHGMCLRREFKFAKELYVKMREM 519
Query: 514 GL 515
GL
Sbjct: 520 GL 521
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 27/330 (8%)
Query: 65 YSTAISLSHQLEFTGITPDI-------------VTLNILINCYCHQAQITSAFSVLAKIL 111
Y+TAISL ++ T I +T ++L++ + + A V +++
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTR 171
+I + AL+ ++ +G N ++ TLIN L K G+
Sbjct: 277 NNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVG 336
Query: 172 ASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLI 231
++ ++ KPD +N ++ +L K D L+ + + ++ N +
Sbjct: 337 LVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRS----ENLCCLNEYL 392
Query: 232 YGFCIV-----GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMM 286
Y +V G ++A+ LL EM + +YN+++ A K K K A V M
Sbjct: 393 YNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMA 452
Query: 287 KQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVD 346
++ KPN TY SL+ S ++ + IL + V P+V YN I+G+C +
Sbjct: 453 QRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL-----KKVEPDVSLYNAAIHGMCLRREFK 507
Query: 347 EALNLFAEMDCKNIVPNTVTFNSLIDGLCK 376
A L+ +M + P+ T ++ L K
Sbjct: 508 FAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 55 ILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKG 114
++++ K + + A+ + + G+ P++V N LIN ++ F V + + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 115 YQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFH-LNQISYGTLINGLCKMGQTRAS 173
++P+ T+ L+ L + + LQ D + ++ LN+ Y T + K+G +
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 174 LQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM------------------ 215
++LL ++EG + YN +I + K A +Y M
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS 469
Query: 216 ------------VAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
+ ++ P V +N+ I+G C+ + K A L +M + PD T
Sbjct: 470 CIWGSLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRA 529
Query: 264 ILVDAFCKEGK 274
+++ K K
Sbjct: 530 MMLQNLKKHQK 540
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 202/488 (41%), Gaps = 45/488 (9%)
Query: 48 PIIEFGKILTSLVK---MKHYSTAISL-SHQLEFTGI-TPDIVTLNILINCYCHQAQITS 102
PI++ G + V + YS S+ S + F GI DIV +++CY
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLIN 162
+ +L+ + G+ PN TF T +K G A H ++ + L+ L+
Sbjct: 231 SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQ 290
Query: 163 GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
++G + K+ ++ K DVV ++ +I C++ +A +L+ M ++P
Sbjct: 291 LYTQLGDMSDAF----KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTK-NINPDVYTYNILVDAFCKEGKVKEATNV 281
+ T +S++ G C +G+ L +V K + D+Y N L+D + K K+ A +
Sbjct: 347 NEFTLSSILNG-CAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 282 LAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCK 341
A + + N V++ +++ GY + E KA + + V+ ++++ +
Sbjct: 406 FAELSSK----NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 342 IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS----------------NIITYNSL 385
+ +D + + N NSLID K ++ ++N+L
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 386 LDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLT-KG 444
+ +A+ ++ ++D+ +P+ T+ ++ G G + QE + ++ G
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 445 YPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFET---IIRALFEKGENY 501
+ YT M+ L + G D+A+ L+ + I +E I RA+ N
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLI----------EGIPYEPSVMIWRAMLSASMNQ 631
Query: 502 KAEKLLRE 509
E+ R
Sbjct: 632 NNEEFARR 639
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 182/443 (41%), Gaps = 65/443 (14%)
Query: 108 AKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKM 167
+++ ++G++ N FT+ +K + + H +V G+ N LIN
Sbjct: 135 SRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVC 194
Query: 168 GQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTF 227
G ++ + EG L K D+V++ I+ ++ D+ L S M +P+ TF
Sbjct: 195 GSVDSARTVF---EGILCK-DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250
Query: 228 NSLI--------YGF-----------CIV----------------GQLKEAIALLDEMVT 252
++ + + F C V G + +A + +EM
Sbjct: 251 DTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM-P 309
Query: 253 KNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNK 312
KN DV ++ ++ FC+ G EA ++ M + V PN T +S+++G C + + +
Sbjct: 310 KN---DVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG-CAIGKCSG 365
Query: 313 AKYILNSMPQR-GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP-NTV----- 365
L+ + + G ++ N +I+ K + +D A+ LFAE+ KN V NTV
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 366 ----------TFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVR 415
F + +T++S L A +D + + V
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 416 TYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM 475
N L+D + G +K AQ V ++ T + V ++ +I+G GL +AL +L M
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMET----IDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 476 EDNGCMPDAITFETIIRALFEKG 498
+D C P+ +TF ++ G
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAG 564
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 159/370 (42%), Gaps = 40/370 (10%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
D V+ N +I + + + +L+ +P+ TF +++K C G + ++ H
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIH 505
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
+V G N +LI+ K G ++ KI + +
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGM----IEEAEKIHSRFFQR--------------- 546
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
V+ +M R+ V++NS+I G+ + Q ++A L M+ I PD +TY
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQ 322
++D + A ++K+ ++ +V ++L+D Y +++ ++ M +
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL----MFE 662
Query: 323 RGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITY 382
+ + + ++N MI G +EA+ LF M +NI PN VTF S++ +I
Sbjct: 663 KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI-- 720
Query: 383 NSLLDALCKSHHVDKAIALIKKI-RDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLL 441
DK + + RD G+ P + Y+ ++D L + G++K A E+I+++
Sbjct: 721 -------------DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMP 767
Query: 442 TKGYPVTVRT 451
+ V RT
Sbjct: 768 FEADDVIWRT 777
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 169/406 (41%), Gaps = 47/406 (11%)
Query: 118 NTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLL 177
N ++ +I G AL +++ G ++IS + + LQ+
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 178 RKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIV 237
+ DV + N ID K + +AF ++ EM V++N++I
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR----RDAVSWNAIIAAHEQN 461
Query: 238 GQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTY 297
G+ E + L M+ I PD +T+ ++ A C G + + + ++K G+ N
Sbjct: 462 GKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 298 TSLMDGYCLVSEVNKAKYILNSMPQR----GVTPNVQ------------SYNTMINGLCK 341
SL+D Y + +A+ I + QR G ++ S+N++I+G
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVM 580
Query: 342 IKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDA-LCKSHHVDKAIA 400
+ ++A LF M I P+ T+ +++D T +L A L K H
Sbjct: 581 KEQSEDAQMLFTRMMEMGITPDKFTYATVLD--------TCANLASAGLGKQIHAQ---- 628
Query: 401 LIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLC 460
+IKK +Q DV + L+D + G L +++ + + L + + T+ MI G
Sbjct: 629 VIKK----ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFV----TWNAMICGYA 680
Query: 461 KEGLFDEALTLLSKMEDNGCMPDAITFETIIRA-----LFEKGENY 501
G +EA+ L +M P+ +TF +I+RA L +KG Y
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEY 726
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 171/423 (40%), Gaps = 32/423 (7%)
Query: 71 LSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLC 130
++ L +T +V+ N + ++ S FS L + +T F+ + K
Sbjct: 1 MAESLRLLHMTRSVVSFNRCLTEKISYRRVPS-FSYFTDFLNQVNSVSTTNFSFVFKECA 59
Query: 131 LNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVV 190
G ++ Q H H++ GF ++N L ++ + K+ DVV
Sbjct: 60 KQGALELGKQAHAHMIISGFRPTTF----VLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 115
Query: 191 MYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEM 250
+N +I+ K + A N + M+ +R VV++NS++ G+ G+ ++I + +M
Sbjct: 116 SWNKMINGYSKSNDMFKA-NSFFNMMPVR---DVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 251 VTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEV 310
+ I D T+ I++ + ++++ G +VV ++L+D Y
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRF 231
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
++ + +P++ N S++ +I G + ++ AL F EM N + + S+
Sbjct: 232 VESLRVFQGIPEK----NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+ + + L A AL GI VRT + M C+
Sbjct: 288 LRSCAALSELRLGGQL----------HAHALKSDFAADGI---VRTATLDMYAKCD---- 330
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETI 490
N Q+ Q L + ++Y MI G +E +AL L ++ +G D I+ +
Sbjct: 331 -NMQDA-QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 491 IRA 493
RA
Sbjct: 389 FRA 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/524 (17%), Positives = 204/524 (38%), Gaps = 56/524 (10%)
Query: 29 NVDDVVS---IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITP--D 83
N D VS +F+++ P ++ + K++ YS + + F + P D
Sbjct: 95 NSRDFVSASMVFDKM----PLRDVVSWNKMING------YSKSNDMFKANSFFNMMPVRD 144
Query: 84 IVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHD 143
+V+ N +++ Y + + V + ++G + + TF ++K +Q H
Sbjct: 145 VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHG 204
Query: 144 HVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDT 203
VV G + ++ L++ K + SL++ + I K + V ++ II ++
Sbjct: 205 IVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK----NSVSWSAIIAGCVQNN 260
Query: 204 LVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYN 263
L++ A + EM + S + S++ + +L+ L + + D
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 264 ILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQR 323
+D + K +++A ++ N +Y +++ GY KA + + +
Sbjct: 321 ATLDMYAKCDNMQDAQ----ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS 376
Query: 324 GVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLID--GLCKS---- 377
G+ + S + + +K + E L ++ ++ + N+ ID G C++
Sbjct: 377 GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEA 436
Query: 378 ----------NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEE 427
+ +++N+++ A ++ + + L + I+PD T+ ++ C
Sbjct: 437 FRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTG 495
Query: 428 GRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEA----------------LTL 471
G L E+ ++ G +I+ K G+ +EA +
Sbjct: 496 GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEE 555
Query: 472 LSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
L KM + +++ +II K ++ A+ L MM G+
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 599
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/385 (21%), Positives = 176/385 (45%), Gaps = 37/385 (9%)
Query: 83 DIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFH 142
++VT N+++N Y I A + +I +K + +++ T+I G Q+ AL ++
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 143 DHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKD 202
++ G +++ L++ + + LQL G +VK Y+ + ++
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL----HGTIVKRGFDCYDFLQATIIHF 349
Query: 203 TLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTY 262
V++ L + + + + N+LI GF G +++A + D+ K D++++
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK----DIFSW 405
Query: 263 NILVDAFCKEGKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEVNKAKYILNSMP 321
N ++ + + + A ++ M+ VKP+ +T S+ + + + K + +
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 322 QRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVT-FNSLIDGLC----- 375
+ PN +I+ K ++ ALN+F + KNI +T++ +N++I G
Sbjct: 466 FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT--KNISSSTISPWNAIICGSATHGHA 523
Query: 376 ---------------KSNIITYNSLLDALCKSHHVDKAIALIKKIR-DQGIQPDVRTYNI 419
K N IT+ +L A C + V+ + ++ D GI+PD++ Y
Sbjct: 524 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC 583
Query: 420 LMDGLCEEGRLKNAQEVIQDLLTKG 444
++D L + GRL+ A+E+I+ + K
Sbjct: 584 MVDLLGKAGRLEEAKEMIKKMPVKA 608
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 95/497 (19%), Positives = 204/497 (41%), Gaps = 45/497 (9%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
+L + P + + ++ + +S A+ L ++ GI + VTL +I+ H
Sbjct: 128 KLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLG 187
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
I + + +K + T L+ CL ++ A + D + + N +++
Sbjct: 188 GIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER----NLVTWN 243
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAM 218
++NG K G + +L +I K D+V + T+ID + + +A Y+EM+
Sbjct: 244 VMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRC 299
Query: 219 RILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEA 278
+ PS V L+ + + L +V + + + ++ + +K A
Sbjct: 300 GMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLA 359
Query: 279 TNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMING 338
+ VK ++ + +L+ G+ V +A+ + + + ++ S+N MI+G
Sbjct: 360 LQ----QFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDK----DIFSWNAMISG 411
Query: 339 LCKIKMVDEALNLFAEM-DCKNIVPNTVT----------FNSLIDGLCKSNIITYN---- 383
+ AL+LF EM + P+ +T SL +G + + ++
Sbjct: 412 YAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPP 471
Query: 384 ------SLLDALCKSHHVDKAIALI---KKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQ 434
+++D K ++ A+ + K I I P +N ++ G G K A
Sbjct: 472 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLAL 527
Query: 435 EVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKME-DNGCMPDAITFETIIRA 493
++ DL + T+ +++ C GL + T M+ D+G PD + ++
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 494 LFEKGENYKAEKLLREM 510
L + G +A++++++M
Sbjct: 588 LGKAGRLEEAKEMIKKM 604
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 181/422 (42%), Gaps = 40/422 (9%)
Query: 78 TGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQT 137
+G+ + N ++N Y + A SV + + ++ +F ++ G + ++
Sbjct: 70 SGLDSNGYICNSVLNMYAKCRLLADAESVF----RDHAKLDSASFNIMVDGYVRSRRLWD 125
Query: 138 ALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIID 197
AL+ D + + + +SY TLI G + Q +++L R++ + + V T+I
Sbjct: 126 ALKLFDVMPER----SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVIS 181
Query: 198 SLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINP 257
+ + D L S + +++ V +L++ +C+ LK+A L DEM +N+
Sbjct: 182 ACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNL-- 239
Query: 258 DVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYIL 317
T+N++++ + K G +++A + Q + ++V++ +++DG +++++A
Sbjct: 240 --VTWNVMLNGYSKAGLIEQAEE----LFDQITEKDIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 318 NSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKS 377
M + G+ P+ +++ + + L L + K
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGT-------------------IVKR 334
Query: 378 NIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLKNAQEVI 437
Y+ L + + V I L + + ++ + + N L+ G + G ++ A+EV
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 438 QDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM-EDNGCMPDAITFETIIRALFE 496
K + ++ MI+G + AL L +M + PDAIT ++ A+
Sbjct: 395 DQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISS 450
Query: 497 KG 498
G
Sbjct: 451 LG 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 122/283 (43%), Gaps = 28/283 (9%)
Query: 249 EMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVS 308
++ ++ + Y N +++ + K + +A +V + K + ++ ++DGY
Sbjct: 66 RVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF----RDHAKLDSASFNIMVDGYVRSR 121
Query: 309 EVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFN 368
+ A + + MP+R SY T+I G + EA+ LF EM I+ N VT
Sbjct: 122 RLWDALKLFDVMPERSCV----SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLA 177
Query: 369 SLIDGLCKSNIITYNSLLDALCKSHHVDKAIAL----------------IKKIRDQGIQP 412
++I I +L +L ++ + + +K+ D+ +
Sbjct: 178 TVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPER 237
Query: 413 DVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLL 472
++ T+N++++G + G ++ A+E+ + K + ++ MI+G ++ DEAL
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYY 293
Query: 473 SKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMMARGL 515
++M G P + ++ A + K +L ++ RG
Sbjct: 294 TEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 174/410 (42%), Gaps = 31/410 (7%)
Query: 103 AFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLIN 162
A +V K+ +P+T TF ++K V Q H VV GF S ++
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD----SSVHVVT 155
Query: 163 GLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILP 222
GL +M + L RK+ +++ DV ++N ++ K + +A +L M +
Sbjct: 156 GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCW--VR 213
Query: 223 SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVL 282
+ V++ +I G+ G+ EAI + M+ +N+ PD T ++ A G ++ +
Sbjct: 214 NEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC 273
Query: 283 AVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKI 342
+ + +G+ V +++D Y + KA + + +R NV ++ T+I GL
Sbjct: 274 SYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATH 329
Query: 343 KMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALI 402
EAL +F M + PN VTF ++L A VD L
Sbjct: 330 GHGAEALAMFNRMVKAGVRPNDVTF---------------IAILSACSHVGWVDLGKRLF 374
Query: 403 KKIRDQ-GIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCK 461
+R + GI P++ Y ++D L G+L+ A EVI+ + K + N
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 434
Query: 462 EGLFDEALTLLSKMEDNGCMPDAITFETIIRALFEKGENYKAEKLLREMM 511
L + AL+ L K+E P+ ++ L+ + +++R MM
Sbjct: 435 LELGERALSELIKLE-----PNNSGNYMLLANLYSNLGRWDESRMMRNMM 479
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 161/382 (42%), Gaps = 32/382 (8%)
Query: 135 VQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNT 194
++T Q H +++ G + + ++ I G R + + P+ ++NT
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC----PNTYLHNT 83
Query: 195 IIDSLC---KDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
+I +L + + A +Y ++ A+ P TF ++ V + + ++V
Sbjct: 84 MIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV 143
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVN 311
+ V+ L+ + G + +A + M+ + V + +L+ GY V E++
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVN----VWNALLAGYGKVGEMD 199
Query: 312 KAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLI 371
+A+ +L MP N S+ +I+G K EA+ +F M +N+ P+ VT +++
Sbjct: 200 EARSLLEMMPC--WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 372 DGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRLK 431
+ L + +C +VD +G+ V N ++D + G +
Sbjct: 258 SACADLGSL---ELGERICS--YVDH----------RGMNRAVSLNNAVIDMYAKSGNIT 302
Query: 432 NAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMPDAITFETII 491
A +V + + + V T+T +I GL G EAL + ++M G P+ +TF I+
Sbjct: 303 KALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 492 RALFEKGENYKAEKLLREMMAR 513
A G ++L M ++
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSK 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/264 (19%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 30 VDDVVSIFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNI 89
+ + +F R+L + P + +L++ + + ++ G+ + N
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNA 290
Query: 90 LINCYCHQAQITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG 149
+I+ Y IT A V + ++ N +T+TT+I GL +G AL + +V G
Sbjct: 291 VIDMYAKSGNITKALDVFECVNER----NVVTWTTIIAGLATHGHGAEALAMFNRMVKAG 346
Query: 150 FHLNQISYGTLINGLCKMGQTRASLQLLRKIEGKL-VKPDVVMYNTIIDSLCKDTLVTDA 208
N +++ +++ +G +L + K + P++ Y +ID L + + +A
Sbjct: 347 VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Query: 209 FNLYSEMV-AMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVD 267
E++ +M + + SL+ + L+ L E++ N + Y +L +
Sbjct: 407 ----DEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPN-NSGNYMLLAN 461
Query: 268 AFCKEGKVKEATNVLAVMMKQGVK 291
+ G+ E+ + +M GVK
Sbjct: 462 LYSNLGRWDESRMMRNMMKGIGVK 485
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 57 TSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKILKKGYQ 116
+SL+K YS +I + + + LN LI A+ S+ +L+ G +
Sbjct: 70 SSLLKSPDYSLSIFRNSE------ERNPFVLNALIRGLTENARFESSVRHFILMLRLGVK 123
Query: 117 PNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYGTLINGLCKMGQTRASLQL 176
P+ +TF ++K G H + + +L++ K GQ + + Q+
Sbjct: 124 PDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQV 183
Query: 177 LRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVA------------------- 217
+ ++ K ++++N +I+ C+ + A L+ M
Sbjct: 184 FEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGEL 243
Query: 218 ------MRILP--SVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAF 269
++P +VV++ +LI GF G + AI+ EM+ K + P+ YT ++ A
Sbjct: 244 NRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Query: 270 CKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNV 329
K G + + ++ G+K + T+L+D Y E++ A + ++M + ++
Sbjct: 304 SKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DI 359
Query: 330 QSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDAL 389
S+ MI G +A+ F +M P+ V F ++L A
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVF---------------LAVLTAC 404
Query: 390 CKSHHVDKAIALIKKIR-DQGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDL 440
S VD + +R D I+P ++ Y +++D L G+L A E+++++
Sbjct: 405 LNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENM 456
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 9/237 (3%)
Query: 39 RLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQA 98
+L + P ++ + ++ + Y TAIS ++ G+ P+ T+ +++
Sbjct: 248 QLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Query: 99 QITSAFSVLAKILKKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQISYG 158
+ S + IL G + + T L+ G++ A V + H + +S+
Sbjct: 308 ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAAT----VFSNMNHKDILSWT 363
Query: 159 TLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEM-VA 217
+I G G+ ++Q R++ KPD V++ ++ + + V N + M +
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLD 423
Query: 218 MRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
I P++ + ++ G+L EA L++ M INPD+ T+ L A CK K
Sbjct: 424 YAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRA-CKAHK 476
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 23/256 (8%)
Query: 228 NSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMK 287
N+LI G + + ++ M+ + PD T+ ++ + K G + A +K
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 288 QGVKPNVVTYTSLMDGYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDE 347
V + SL+D Y ++ A + P R ++ +N +ING C+ K +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 348 ALNLFAEMDCKNIVPNTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRD 407
A LF M +N + ++++LI G S +++A L + + +
Sbjct: 215 ATTLFRSMPERN----SGSWSTLIKGYVDSG---------------ELNRAKQLFELMPE 255
Query: 408 QGIQPDVRTYNILMDGLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDE 467
+ +V ++ L++G + G + A ++L KG T +++ K G
Sbjct: 256 K----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGS 311
Query: 468 ALTLLSKMEDNGCMPD 483
+ + + DNG D
Sbjct: 312 GIRIHGYILDNGIKLD 327
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 145/323 (44%), Gaps = 22/323 (6%)
Query: 192 YNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMV 251
Y ++++ CK+ L A L ++M + I PS +++NSL+ + G+ ++ A++ E+
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 252 TKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQG-VKPNVVTYTSLMDGYCLVSEV 310
+N+ PD YTYN+ + A + V+ M + G V P+ TY+++ Y
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 311 NKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVPNTVTFNSL 370
KA+ L + + + +Y +I ++ + E + + SL
Sbjct: 246 QKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRI---------------WRSL 290
Query: 371 IDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMDGLCEEGRL 430
+ K++ + Y +++ L K + + A L K+ + D+R N+L+ +EG +
Sbjct: 291 RLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLI 350
Query: 431 KNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKM-----EDNG-CMPDA 484
+ A E+ + +G + +T+ I ++ K G AL +SK D G +P
Sbjct: 351 QKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSP 410
Query: 485 ITFETIIRALFEKGENYKAEKLL 507
T ++ +K + AE LL
Sbjct: 411 ETVRALMSYFEQKKDVNGAENLL 433
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 16/270 (5%)
Query: 243 AIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGVKPNVVTYTSLMD 302
A+ L + M + +N V I +D K ++ N + + +TY SL++
Sbjct: 74 ALKLSEVMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPE--TSKTELTYGSLLN 131
Query: 303 GYCLVSEVNKAKYILNSMPQRGVTPNVQSYNTMINGLCKIKMVDEALNLFAEMDCKNIVP 362
YC KA+ +LN M + +TP+ SYN+++ K ++ + E+ +N++P
Sbjct: 132 CYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMP 191
Query: 363 NTVTFNSLIDGLCKSNIITYNSLLDALCKSHHVDKAIALIKKIRDQGIQPDVRTYNILMD 422
++ T+N + L +N I+ V++ I + RD + PD TY+ +
Sbjct: 192 DSYTYNVWMRALAATNDIS------------GVERVIEEMN--RDGRVAPDWTTYSNMAS 237
Query: 423 GLCEEGRLKNAQEVIQDLLTKGYPVTVRTYTIMINGLCKEGLFDEALTLLSKMEDNGCMP 482
+ G + A++ +Q+L K Y +I + G E + +
Sbjct: 238 IYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKT 297
Query: 483 DAITFETIIRALFEKGENYKAEKLLREMMA 512
+ + +I+ L + + AE L +E A
Sbjct: 298 SNVAYLNMIQVLVKLNDLPGAETLFKEWQA 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/263 (17%), Positives = 110/263 (41%), Gaps = 1/263 (0%)
Query: 52 FGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYCHQAQITSAFSVLAKIL 111
+G +L K A L ++++ ITP ++ N L+ Y + +++ ++
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 112 KKGYQPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQG-FHLNQISYGTLINGLCKMGQT 170
+ P++ T+ ++ L + + + + G + +Y + + G +
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 171 RASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSEMVAMRILPSVVTFNSL 230
+ + + L+++E K + D Y +I + +T+ + ++ + S V + ++
Sbjct: 246 QKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNM 305
Query: 231 IYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGKVKEATNVLAVMMKQGV 290
I + L A L E D+ N+L+ A+ +EG +++A + ++G
Sbjct: 306 IQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGG 365
Query: 291 KPNVVTYTSLMDGYCLVSEVNKA 313
K N T+ MD Y ++ +A
Sbjct: 366 KLNAKTWEIFMDYYVKSGDMARA 388
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 118/289 (40%), Gaps = 7/289 (2%)
Query: 36 IFNRLLRMSPTPPIIEFGKILTSLVKMKHYSTAISLSHQLEFTGITPDIVTLNILINCYC 95
+ N++ ++ TP + + ++T K ++ +L+ + PD T N+ +
Sbjct: 145 LLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALA 204
Query: 96 HQAQITSAFSVLAKILKKGY-QPNTITFTTLIKGLCLNGQVQTALQFHDHVVAQGFHLNQ 154
I+ V+ ++ + G P+ T++ + G Q A + + + +
Sbjct: 205 ATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDF 264
Query: 155 ISYGTLINGLCKMGQTRASLQLLRKIEGKLVKPDVVMYNTIIDSLCKDTLVTDAFNLYSE 214
+Y LI ++G+ ++ R + + K V Y +I L K + A L+ E
Sbjct: 265 TAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKE 324
Query: 215 MVAMRILPSVVTFNSLIYGFCIVGQLKEAIALLDEMVTKNINPDVYTYNILVDAFCKEGK 274
A + N LI + G +++A L ++ + + T+ I +D + K G
Sbjct: 325 WQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGD 384
Query: 275 VKEA----TNVLAVMMKQGVK--PNVVTYTSLMDGYCLVSEVNKAKYIL 317
+ A + +++ G K P+ T +LM + +VN A+ +L
Sbjct: 385 MARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLL 433