Miyakogusa Predicted Gene

Lj1g3v3063920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3063920.1 Non Chatacterized Hit- tr|C0PTE0|C0PTE0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,33.14,0.00000000007,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.29985.1
         (333 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15780.1 | Symbols:  | Pollen Ole e 1 allergen and extensin f...   119   3e-27

>AT5G15780.1 | Symbols:  | Pollen Ole e 1 allergen and extensin
           family protein | chr5:5144898-5146297 REVERSE LENGTH=401
          Length = 401

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/119 (60%), Positives = 92/119 (77%), Gaps = 5/119 (4%)

Query: 17  PIFLCAGASVAVECKDGDGSSNSSFKKEVKTDEHGKFRVHLPFSVSKHVKRIKRCSVKLI 76
           P  L +GA VAVEC D +  S  SF++EVKTD+ G+F+V LPFSVSKHVK+IKRCSVKL+
Sbjct: 60  PNHLISGALVAVECIDEN--SKPSFRQEVKTDKRGEFKVKLPFSVSKHVKKIKRCSVKLL 117

Query: 77  SSSEPYCAVASAATSSSL-HLKSRKQG--LHIFSAGFFSFKPLKQPTLCNQKPRVQKGA 132
           SSS+PYC++AS+ATSSSL  LKS   G    +FSAGFF+F+P  QP +C+QKP   +G+
Sbjct: 118 SSSQPYCSIASSATSSSLKRLKSNHHGENTRVFSAGFFTFRPENQPEICSQKPINLRGS 176