Miyakogusa Predicted Gene

Lj1g3v3021200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3021200.1 CUFF.29888.1
         (965 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69830.1 | Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 | chr...   541   e-154
AT1G76130.1 | Symbols: ATAMY2, AMY2 | alpha-amylase-like 2 | chr...   443   e-124
AT4G25000.1 | Symbols: ATAMY1, AMY1 | alpha-amylase-like | chr4:...   346   4e-95

>AT1G69830.1 | Symbols: ATAMY3, AMY3 | alpha-amylase-like 3 |
           chr1:26288518-26293003 REVERSE LENGTH=887
          Length = 887

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 250/405 (61%), Positives = 306/405 (75%), Gaps = 9/405 (2%)

Query: 561 KLEPGTGSGREIVFQAFNWESWRRS-WYLELSSKAADLSQCGVTAVWLPPPTNSVSPQGY 619
           K+  GTGSG EI+ Q FNWES +   WYLEL  KA +L+  G T +WLPPPT SVSP+GY
Sbjct: 486 KISSGTGSGFEILCQGFNWESNKSGRWYLELQEKADELASLGFTVLWLPPPTESVSPEGY 545

Query: 620 MPSDLYNLNSSYGSVEELKSCIEEMHSQDLVVLGDAVLNHRCAQKQSPNGVWNIFGGKLA 679
           MP DLYNLNS YG+++ELK  +++ H   + VLGDAVLNHRCA  ++ NGVWN+FGG+L 
Sbjct: 546 MPKDLYNLNSRYGTIDELKDTVKKFHKVGIKVLGDAVLNHRCAHFKNQNGVWNLFGGRLN 605

Query: 680 WGPEAIVCDDPNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKGWLNWLRNDIGFDGWRL 739
           W   A+V DDP+FQGRGN SSGD FHAAPNIDHSQDFVRKDIK WL W+  ++G+DGWRL
Sbjct: 606 WDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWMMEEVGYDGWRL 665

Query: 740 DFVRGFSGTYVKEYIEASNPVFAIGEYWDSLAYEHGSLCYNQDAHRQRIVNWINATGGTS 799
           DFVRGF G YVK+Y++AS P FA+GEYWDSL+Y +G + YNQDAHRQRIV+WINAT G +
Sbjct: 666 DFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINATSGAA 725

Query: 800 SAFDITTKGILHSALHN-EYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFP 858
            AFD+TTKGILH+AL   EYWRL DP+GKP GV+GWWPSRAVTF+ENHDTGSTQGHW FP
Sbjct: 726 GAFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFP 785

Query: 859 RDKLMQGYAYILTHPGTPVIFYDH-FYDFGIHDVITELIEARRRAGIHCRSSIKIIHAHN 917
             K MQGYAYILTHPGTP +F+DH F D+  H  I  L+  R R  +HCRS + I  +  
Sbjct: 786 EGKEMQGYAYILTHPGTPAVFFDHIFSDY--HSEIAALLSLRNRQKLHCRSEVNIDKSER 843

Query: 918 EGYVAQVGDALVMKLGHFDWNPSKENQLEGSWQKFVDKGQDYQVW 962
           + Y A + + + MK+G   + P   +Q   +W   V+ G+DY+VW
Sbjct: 844 DVYAAIIDEKVAMKIGPGHYEPPNGSQ---NWSVAVE-GRDYKVW 884


>AT1G76130.1 | Symbols: ATAMY2, AMY2 | alpha-amylase-like 2 |
           chr1:28561647-28563914 FORWARD LENGTH=413
          Length = 413

 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/409 (51%), Positives = 273/409 (66%), Gaps = 14/409 (3%)

Query: 558 EQTKLEPGTGSGREIVFQAFNWESWRRSWYLELSSKAADLSQCGVTAVWLPPPTNSVSPQ 617
           +QT +      GRE++ QA+NWES +  W+  L  K  D+++ G T+ WLPPP+ S++P+
Sbjct: 13  DQTDIGRVIRDGREVILQAYNWESHKYDWWRNLDGKVPDIAKSGFTSAWLPPPSQSLAPE 72

Query: 618 GYMPSDLYNLNSSYGSVEELKSCIEEMHSQDLVVLGDAVLNHRCAQKQSPNGVWNIFGG- 676
           GY+P DLY+LNS+YGS   LKS + +M    +  + D V+NHR    +   G++N + G 
Sbjct: 73  GYLPQDLYSLNSAYGSEHLLKSLLRKMKQYKVRAMADIVINHRVGTTRGHGGMYNRYDGI 132

Query: 677 KLAWGPEAIV-CDDPNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKGWLNWLRNDIGFD 735
            L W   A+  C      G GN S+GD F+  PN+DH+Q FVRKDI GWL WLRN +GF 
Sbjct: 133 SLPWDEHAVTSCTG----GLGNRSTGDNFNGVPNVDHTQHFVRKDIIGWLRWLRNTVGFQ 188

Query: 736 GWRLDFVRGFSGTYVKEYIEASNPVFAIGEYWDSLAYEHGSLCYNQDAHRQRIVNWINAT 795
            +R DF RG+S  YVKEYI A+ P+F++GE WDS  Y    L YNQD+HRQRI++WI+AT
Sbjct: 189 DFRFDFARGYSANYVKEYIGAAKPLFSVGECWDSCNYNGHGLDYNQDSHRQRIISWIDAT 248

Query: 796 GGTSSAFDITTKGILHSALHNEYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHW 855
           G  S+AFD TTKGIL  A+  +YWRL D QGKP GVMGWWPSRAVTFL+NHDTGSTQ HW
Sbjct: 249 GQISAAFDFTTKGILQEAVKGQYWRLCDAQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHW 308

Query: 856 PFPRDKLMQGYAYILTHPGTPVIFYDHFYDFG--IHDVITELIEARRRAGIHCRSSIKII 913
           PFP   +M+GYAYILTHPG P +FYDHFYD+G  IHD I +LI+ RRR  IH RS+++++
Sbjct: 309 PFPSHHVMEGYAYILTHPGIPCVFYDHFYDWGSSIHDQIVKLIDIRRRQDIHSRSTVRVL 368

Query: 914 HAHNEGYVAQVGDALVMKLGHFDWNPSKENQLEGSWQKFVDKGQDYQVW 962
            A +  Y A VG+ + MKLG   W PS  +            G  Y VW
Sbjct: 369 KAESNLYAAIVGEKICMKLGDGSWCPSGRD------WTLATSGHRYAVW 411


>AT4G25000.1 | Symbols: ATAMY1, AMY1 | alpha-amylase-like |
           chr4:12852109-12853825 REVERSE LENGTH=423
          Length = 423

 Score =  346 bits (888), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 168/372 (45%), Positives = 243/372 (65%), Gaps = 13/372 (3%)

Query: 572 IVFQAFNWESWRR--SWYLELSSKAADLSQCGVTAVWLPPPTNSVSPQGYMPSDLYNLNS 629
           ++FQ+FNWESW++   +Y  L +   D++  G+T +WLPPP+ SV+P+GY+P  LY+LNS
Sbjct: 27  LLFQSFNWESWKKEGGFYNSLHNSIDDIANAGITHLWLPPPSQSVAPEGYLPGKLYDLNS 86

Query: 630 S-YGSVEELKSCIEEMHSQDLVVLGDAVLNHRCAQKQSPNGVWNIFGG-----KLAWGPE 683
           S YGS  ELKS I+ ++ + +  L D V+NHR A+++     +  F G     +L W P 
Sbjct: 87  SKYGSEAELKSLIKALNQKGIKALADIVINHRTAERKDDKCGYCYFEGGTSDDRLDWDPS 146

Query: 684 AIVCDDPNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKGWLNWLRNDIGFDGWRLDFVR 743
            +  +DP F G GN  +G  F  AP+IDH    V+K++  W+NWL+ +IGF GWR D+VR
Sbjct: 147 FVCRNDPKFPGTGNLDTGGDFDGAPDIDHLNPRVQKELSEWMNWLKTEIGFHGWRFDYVR 206

Query: 744 GFSGTYVKEYIEASNPVFAIGEYWDSLAY-EHGSLCYNQDAHRQRIVNWI-NATGGTSSA 801
           G++ +  K Y++ ++P FA+GE WD + Y   G L Y+Q+ HR  +  WI  A GG  +A
Sbjct: 207 GYASSITKLYVQNTSPDFAVGEKWDDMKYGGDGKLDYDQNEHRSGLKQWIEEAGGGVLTA 266

Query: 802 FDITTKGILHSALHNEYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDK 861
           FD TTKGIL SA+  E WRL D QGKP G++G  P  AVTF++NHDT  T   W FP DK
Sbjct: 267 FDFTTKGILQSAVKGELWRLKDSQGKPPGMIGIMPGNAVTFIDNHDTFRT---WVFPSDK 323

Query: 862 LMQGYAYILTHPGTPVIFYDHFYDFGIHDVITELIEARRRAGIHCRSSIKIIHAHNEGYV 921
           ++ GY YILTHPGTP IFY+H+ ++G+ + I++L+  R + GI   SS+ I  A  + Y+
Sbjct: 324 VLLGYVYILTHPGTPCIFYNHYIEWGLKESISKLVAIRNKNGIGSTSSVTIKAAEADLYL 383

Query: 922 AQVGDALVMKLG 933
           A + D ++MK+G
Sbjct: 384 AMIDDKVIMKIG 395