Miyakogusa Predicted Gene

Lj1g3v3018830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3018830.1 tr|Q016Y8|Q016Y8_OSTTA WGS project CAID00000000
data, contig chromosome 06 OS=Ostreococcus tauri GN=,20.39,0.013,
,gene.g33961.t1.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25660.1 | Symbols: emb2410 | embryo defective 2410 | chr2:10...   194   2e-50

>AT2G25660.1 | Symbols: emb2410 | embryo defective 2410 |
            chr2:10916456-10927390 REVERSE LENGTH=2166
          Length = 2166

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 101/179 (56%), Positives = 126/179 (70%), Gaps = 14/179 (7%)

Query: 5    RFDIKWTAPIAEGSFNDARGDIIISHDFITVNSSSAAFDLYTRIQTSYPGDFYLKNEEFY 64
            RFDIKW AP A+GS  DARGDI+ISHD I VNSSS AFDL+T++ TSY  D  L +++F 
Sbjct: 981  RFDIKWAAPKADGSLTDARGDIVISHDNIIVNSSSVAFDLFTKLDTSYH-DPCLSHQDFT 1039

Query: 65   APRAIPFTIDGVELDLRMRGFEFFSLVSAYTMDSPKPLHLKATGRIKFQGKVLKPS---- 120
               A+PF ++G++LDLRMRGFEFFSLVS+Y  DSP+P HLKATGRIKF GK+ + S    
Sbjct: 1040 QGEAMPFVVEGLDLDLRMRGFEFFSLVSSYPFDSPRPTHLKATGRIKFLGKIKRHSTTKD 1099

Query: 121  GSISEQNFEMNRQHVQMLEKGITDSLDGEISISGLKLNQLMLAPQLSGLLRISPERIKV 179
            G +     E         +     SLDG+ISIS LKLNQL+LAPQLSG L +S + +K+
Sbjct: 1100 GDVGSDKCE---------DAAAISSLDGDISISSLKLNQLILAPQLSGRLSVSRDHVKL 1149