Miyakogusa Predicted Gene

Lj1g3v3008790.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3008790.2 Non Chatacterized Hit- tr|I3SZG2|I3SZG2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.31,0,BIOTIN,Biotin-binding site; BCCP: acetyl-CoA carboxylase,
biotin carboxyl carr,Acetyl-CoA biotin car,CUFF.29901.2
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic ...   156   2e-38
AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 ...   116   2e-26
AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier p...   109   2e-24

>AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic
           acetylcoenzyme A carboxylase 1 | chr5:5361098-5363020
           REVERSE LENGTH=280
          Length = 280

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/233 (42%), Positives = 125/233 (53%), Gaps = 9/233 (3%)

Query: 61  NRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKDNGKPSGPSTSTDAS--S 118
           +R  Y V K Q   S   + G SSN+A V    P  A  +EK++ K S  S+   A+  S
Sbjct: 53  SRSSYPVVKAQ---SNKVSTGASSNAAKV--DGPSSAEGKEKNSLKESSASSPELATEES 107

Query: 119 ISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPP--PATFVXXXXXXXXXX 176
           IS F+ QV+ LVKLVDS+DIVELQLKQ D EL+IRKKEAL  P  PA++V          
Sbjct: 108 ISEFLTQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSY 167

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGTFYRSPAPGEPPFXX 236
                                                     MAGTFYRSPAPGEPPF  
Sbjct: 168 AQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPAPGEPPFIK 227

Query: 237 XXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPVSVDSPLFAIAP 289
                     +CI+EAMKLMNEIE+D +GT+ +++AEDGKPVS+D+PLF + P
Sbjct: 228 VGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280


>AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 |
           chloroplastic acetylcoenzyme A carboxylase 1 |
           chr5:5361554-5363020 REVERSE LENGTH=254
          Length = 254

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 61  NRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKDNGKPSGPSTSTDAS--S 118
           +R  Y V K Q   S   + G SSN+A V    P  A  +EK++ K S  S+   A+  S
Sbjct: 53  SRSSYPVVKAQ---SNKVSTGASSNAAKV--DGPSSAEGKEKNSLKESSASSPELATEES 107

Query: 119 ISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQPP--PATFVXXXXXXXXXX 176
           IS F+ QV+ LVKLVDS+DIVELQLKQ D EL+IRKKEAL  P  PA++V          
Sbjct: 108 ISEFLTQVTTLVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSY 167

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMAGTFYRSPAPGEPPFXX 236
                                                     MAGTFYRSPAPGEPPF  
Sbjct: 168 AQQMAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPAPGEPPFIK 227

Query: 237 XXXXXXXXXXICIIEAMKLMNEIE 260
                     +CI+EAMKLMNEIE
Sbjct: 228 VGDKVQKGQVLCIVEAMKLMNEIE 251


>AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier
           protein 2 | chr5:5038955-5040437 FORWARD LENGTH=255
          Length = 255

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/71 (73%), Positives = 56/71 (78%)

Query: 219 MAGTFYRSPAPGEPPFXXXXXXXXXXXXICIIEAMKLMNEIEADKSGTIAEVLAEDGKPV 278
           MAGTFYRSP PGEPPF            +CIIEAMKLMNEIEA+KSGTI E+LAEDGKPV
Sbjct: 185 MAGTFYRSPGPGEPPFVKVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPV 244

Query: 279 SVDSPLFAIAP 289
           SVD+PLF IAP
Sbjct: 245 SVDTPLFVIAP 255



 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 22/111 (19%)

Query: 54  PNGIQ---ALNRKQYSVWKFQALPSEAATVGNSSNSAPVLVKEPKVASLEEKDNGKPSGP 110
           PNGI     +++   + W+ +A  +E       SNS P+             + G  +G 
Sbjct: 33  PNGISFPSDVSQNHSAFWRLRATTNEVV-----SNSTPM------------TNGGYMNGK 75

Query: 111 STST--DASSISAFMNQVSDLVKLVDSKDIVELQLKQADYELMIRKKEALQ 159
           + +   + + +S FM +VS L+KLVDSKDIVEL+LKQ D E++IRKKEALQ
Sbjct: 76  AKTNVPEPAELSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQ 126