Miyakogusa Predicted Gene

Lj1g3v3006700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3006700.1 Non Chatacterized Hit- tr|K3Z6S9|K3Z6S9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022248,50.51,1e-18,seg,NULL,CUFF.29857.1
         (457 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29310.1 | Symbols:  | calmodulin-binding protein-related | c...   108   9e-24

>AT3G29310.1 | Symbols:  | calmodulin-binding protein-related |
           chr3:11249712-11251452 FORWARD LENGTH=551
          Length = 551

 Score =  108 bits (270), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 144/307 (46%), Gaps = 51/307 (16%)

Query: 54  DHLVQAIASLLLSQPHLIPTQLHPKPHTRD-NLDLNTHHLKHQHQT------HSTISSLL 106
           D+L+  +A+ L  Q H   TQ   +   ++ N+  + + +  QH+          +S LL
Sbjct: 46  DNLLHLVATYL--QNHQQETQCSCETSCQNFNVIRSQNRVLRQHKNVPREYDQVVLSCLL 103

Query: 107 DRIESLESSLNLHT---------HQSLRHAAARVIQTHFRSFLVRRSRTLSYLKHLASIX 157
            +I+ LESSLN  +         H +LR +AARVIQTHFRS+LV RS +   LK LA I 
Sbjct: 104 RKIDDLESSLNKFSSFYDKRRDRHSTLRDSAARVIQTHFRSYLVHRSISFRQLKELAMIK 163

Query: 158 XXXXXXXXXXXXXPHFDFSALSFKAMNLLLELDSIQD-CDPMILDGKRSISRDLVQFLDS 216
                          F F  +S KA +LLL+LDSIQ   DPMI   KRS+SRDLV+F+  
Sbjct: 164 ASFLSLKSSVSGKLIFPFKVVSRKATDLLLQLDSIQGRIDPMIRSSKRSLSRDLVRFVQY 223

Query: 217 IEEVAMKKHLHCVKAVKNPRYGQKVQKPKNVGDEEKRKLLQNLRGRVERISKLCNNPSAN 276
           +++  +K++   VK+    +   K  KP+  G                         S+ 
Sbjct: 224 VDDCVVKRYGFVVKSGSGIKLNGK--KPQGFG------------------------TSSE 257

Query: 277 GEDLEPDEGIYDHEDEDEDGVTNVLMSRRSEVSANKNGGFVQRQGVVQPRVKKSVRFAEN 336
            ED   D      +D +E  V+++   +R   S+    G V    VV+P V K V   +N
Sbjct: 258 DEDNNADMS----DDSEEVPVSSI--DKRKVASSKSRTGVVIEGDVVKPPVMKFVVLDKN 311

Query: 337 GNTYEVY 343
            N  +VY
Sbjct: 312 RNVCQVY 318