Miyakogusa Predicted Gene

Lj1g3v2996670.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2996670.2 Non Chatacterized Hit- tr|I3STY9|I3STY9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.29,0,Rad60-SLD_2,NULL; UBIQUITIN_2,Ubiquitin supergroup; no
description,NULL; Ubiquitin-like,NULL,CUFF.29851.2
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p...   140   2e-34
AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold p...   140   2e-34
AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold p...   135   5e-33
AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold p...   129   3e-31
AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold p...   113   3e-26
AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold p...   107   2e-24
AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein | chr4:1...   107   2e-24

>AT5G15460.2 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
           protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
          Length = 124

 Score =  140 bits (353), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 88/118 (74%), Gaps = 3/118 (2%)

Query: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLIS 60
           MA  ++Q EIKFRL DGSDIGPK F  AT++ATLKE+++AQWP+DKENGP+TVKD+KLIS
Sbjct: 1   MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLIS 60

Query: 61  AGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPXXXXXXXXXXXX---XQNKCLCV 115
           AG+IL+NN+TVG+C+SP+ +    VTTMHV++Q                  QNKC+C+
Sbjct: 61  AGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCL 118


>AT5G15460.1 | Symbols: MUB2 | membrane-anchored ubiquitin-fold
           protein 2 | chr5:5018947-5020105 REVERSE LENGTH=124
          Length = 124

 Score =  140 bits (353), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 88/118 (74%), Gaps = 3/118 (2%)

Query: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLIS 60
           MA  ++Q EIKFRL DGSDIGPK F  AT++ATLKE+++AQWP+DKENGP+TVKD+KLIS
Sbjct: 1   MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLIS 60

Query: 61  AGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPXXXXXXXXXXXX---XQNKCLCV 115
           AG+IL+NN+TVG+C+SP+ +    VTTMHV++Q                  QNKC+C+
Sbjct: 61  AGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEKEKKKKKPKGDLKQNKCVCL 118


>AT3G01050.1 | Symbols: MUB1 | membrane-anchored ubiquitin-fold
           protein 1 precursor | chr3:13854-14675 FORWARD
           LENGTH=117
          Length = 117

 Score =  135 bits (341), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 59/117 (50%), Positives = 86/117 (73%)

Query: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLIS 60
           MA    Q EIKFRLTDGSDIGPK+F  AT+++ LKE+++++WP++KENGP+TVK++KLIS
Sbjct: 1   MAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLIS 60

Query: 61  AGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPXXXXXXXXXXXXXQNKCLCVIL 117
           AGK+L+N++TV + +SP+ +    VTTMHV++Q P              NKC+C ++
Sbjct: 61  AGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEKEKKPKGDPKMNKCVCSVM 117


>AT1G22050.1 | Symbols: MUB6 | membrane-anchored ubiquitin-fold
           protein 6 precursor | chr1:7771897-7772843 FORWARD
           LENGTH=119
          Length = 119

 Score =  129 bits (325), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 2/119 (1%)

Query: 1   MAGTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLIS 60
           MAG E+  E+KFRL DG+DIGP  +  + ++++LKE +++QWPKDKEN P+TV DMKLI+
Sbjct: 1   MAGEEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLIN 60

Query: 61  AGKILDNNRTVGECQSPLCDAPDTVTTMHVVVQPPXXXXXXXXXXXX--XQNKCLCVIL 117
           AGKIL+NNRT+ E + P+C+ P  + TMH+V++ P               +N+C+C IL
Sbjct: 61  AGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDKKSEKLQNDPPMKNRCVCTIL 119


>AT1G77870.1 | Symbols: MUB5 | membrane-anchored ubiquitin-fold
           protein 5 precursor | chr1:29285177-29285714 FORWARD
           LENGTH=120
          Length = 120

 Score =  113 bits (282), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/119 (45%), Positives = 79/119 (66%), Gaps = 4/119 (3%)

Query: 3   GTEEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLISAG 62
           G E+  E+KFRL DG+DIGP  ++   ++A+LKE I+AQWPKDKEN P+ + ++KLI+ G
Sbjct: 2   GDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGG 61

Query: 63  KILDNNRTVGECQS--PLCDAPDTVTTMHVVVQPPXXXXXXXXXXXX--XQNKCLCVIL 117
           KIL+NN+T+ E +S   + + P  VTTMHVV++PP               ++ C+C IL
Sbjct: 62  KILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEKKKEKLQNDPPRKSHCVCCIL 120


>AT3G26980.1 | Symbols: MUB4 | membrane-anchored ubiquitin-fold
          protein 4 precursor | chr3:9946467-9947444 REVERSE
          LENGTH=120
          Length = 120

 Score =  107 bits (267), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 68/89 (76%)

Query: 5  EEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLISAGKI 64
          E+  E+KFRL DGSD+GP  ++   +++ LKE I+++WPKDK+  P++  D+KLI+AGKI
Sbjct: 4  EDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKDKKIVPKSASDIKLINAGKI 63

Query: 65 LDNNRTVGECQSPLCDAPDTVTTMHVVVQ 93
          L+N +TV +C++P  D P +V TMHVVVQ
Sbjct: 64 LENGKTVAQCKAPFDDLPKSVITMHVVVQ 92


>AT4G24990.1 | Symbols: ATGP4 | Ubiquitin family protein |
          chr4:12849973-12851249 REVERSE LENGTH=118
          Length = 118

 Score =  107 bits (266), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 47/90 (52%), Positives = 67/90 (74%)

Query: 5  EEQFEIKFRLTDGSDIGPKSFAAATSIATLKESILAQWPKDKENGPRTVKDMKLISAGKI 64
          EE  +IKFRL DGSDIGP  ++AA+++  LK+ +++ WPK K   P+ + ++KLIS+GKI
Sbjct: 4  EESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPKGKTVVPKGINEVKLISSGKI 63

Query: 65 LDNNRTVGECQSPLCDAPDTVTTMHVVVQP 94
          L+NN+TVG+C++P  D    V  MHVVVQP
Sbjct: 64 LENNKTVGQCKTPFGDIAGGVIVMHVVVQP 93