Miyakogusa Predicted Gene

Lj1g3v2980360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2980360.1 Non Chatacterized Hit- tr|I1LWM1|I1LWM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56077
PE,57.75,3e-18,EMP24_GP25L,GOLD,CUFF.29805.1
         (100 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26690.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    74   2e-14
AT1G14010.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    67   2e-12
AT2G03290.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    67   2e-12
AT2G03040.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    67   3e-12
AT1G69460.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    66   5e-12
AT3G29070.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family pro...    59   7e-10

>AT1G26690.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr1:9224299-9225682 REVERSE LENGTH=214
          Length = 214

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 4/67 (5%)

Query: 5  ILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSH 64
          IL  L +S  +      S+ FEL+S + KCI+EDIKSN++TVGKY VV+P+E +P P SH
Sbjct: 11 ILLFLAISSQVS----QSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQSH 66

Query: 65 KITLRIV 71
          KI++R+ 
Sbjct: 67 KISIRVT 73


>AT1G14010.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr1:4800385-4801790 REVERSE LENGTH=212
          Length = 212

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 5/67 (7%)

Query: 5  ILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSH 64
          +L L ++SP  +     S+R+EL S   KCI+E+I +NA+T+GKY +++P E +P+P SH
Sbjct: 10 LLILSILSPVTL-----SIRYELLSGHTKCISEEIHANAMTIGKYSIINPHEDHPLPSSH 64

Query: 65 KITLRIV 71
          K+T+R+ 
Sbjct: 65 KVTVRVT 71


>AT2G03290.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr2:999422-1000434 FORWARD LENGTH=213
          Length = 213

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 44/51 (86%), Gaps = 1/51 (1%)

Query: 22 SMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSE-GYPVPDSHKITLRIV 71
          SMR+ELKS++ KCI E+I  NA+++GKY++V+P+E  +P+PDSHKI ++++
Sbjct: 22 SMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDNHPLPDSHKIIVKVM 72


>AT2G03040.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr2:892823-893572 REVERSE LENGTH=166
          Length = 166

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 44/51 (86%), Gaps = 1/51 (1%)

Query: 22 SMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEG-YPVPDSHKITLRIV 71
          SMR+ELKS++ KCI E+I  NA+++GKY++V+P+E  +P+PDSHKI ++++
Sbjct: 22 SMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDHHPLPDSHKIIVKVM 72


>AT1G69460.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr1:26112054-26113160 REVERSE LENGTH=214
          Length = 214

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 49/73 (67%)

Query: 1  MSNQILFLLLVSPALMCSFVDSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPV 60
          + +Q L+ +L+  A+      S+ F+L S + KCI EDIKSN++TVGKY + +P EG  +
Sbjct: 3  LQSQKLWTMLLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQAL 62

Query: 61 PDSHKITLRIVWN 73
          P +HKI++++  N
Sbjct: 63 PQTHKISVKVTSN 75


>AT3G29070.1 | Symbols:  | emp24/gp25L/p24 family/GOLD family
          protein | chr3:11050193-11051153 FORWARD LENGTH=225
          Length = 225

 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 37/46 (80%)

Query: 21 DSMRFELKSNQPKCINEDIKSNALTVGKYYVVSPSEGYPVPDSHKI 66
          +SMR +++S   KCI++DIK+N +TVG Y +V+P+EG+ +P SHK+
Sbjct: 34 ESMRLDMESGNTKCISDDIKTNYMTVGTYSIVNPNEGHHLPPSHKL 79