Miyakogusa Predicted Gene

Lj1g3v2979230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2979230.1 tr|I0Z849|I0Z849_9CHLO Cystathionine
gamma-synthase OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,47.67,5e-16,seg,NULL; Cys_Met_Meta_PP,Cys/Met metabolism,
pyridoxal phosphate-dependent enzyme; no description,P,CUFF.29835.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G33320.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    86   3e-17
AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal phosp...    80   1e-15

>AT1G33320.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr1:12081009-12083462 FORWARD LENGTH=412
          Length = 412

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 47/59 (79%)

Query: 150 AERLGRAIVTDAITTPVVNTSAYFFKNTADLIDYKEKRLASYEYARYGNPTSTVLEEKI 208
            ERL R + T +ITT VVNT+ YFFK+T +LID+KEKR+  YEYARYGNPT+  LEEKI
Sbjct: 33  GERLRRDMKTSSITTLVVNTTTYFFKDTTELIDFKEKRIDLYEYARYGNPTTMALEEKI 91


>AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal
          phosphate (PLP)-dependent transferases superfamily
          protein | chr3:39234-41865 REVERSE LENGTH=563
          Length = 563

 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/95 (50%), Positives = 57/95 (60%), Gaps = 12/95 (12%)

Query: 1  MAVSSFH--RVFT------FECRXXXXXXXXXXXXXNLRRRHFKPSAVSAAFHGPSSL-- 50
          MAVSSF    +F+      F+CR             + RR H   + +S++F G + L  
Sbjct: 1  MAVSSFQCPTIFSSSSISGFQCRSDPDLVGSPVGGSSRRRVH-ASAGISSSFTGDAGLSS 59

Query: 51 -ILRFPPNFQRQLSTKARRNCSNIGVAQIVAASWS 84
           ILRFPPNF RQLS KARRNCSNIGVAQIVAA WS
Sbjct: 60 RILRFPPNFVRQLSIKARRNCSNIGVAQIVAAKWS 94