Miyakogusa Predicted Gene
- Lj1g3v2975960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2975960.1 Non Chatacterized Hit- tr|I1KTT0|I1KTT0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,75.36,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; no description,Tet,CUFF.34123.1
(696 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 885 0.0
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 445 e-125
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 443 e-124
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 431 e-121
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 425 e-119
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 414 e-115
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 410 e-114
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 410 e-114
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 409 e-114
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 407 e-114
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 404 e-112
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 404 e-112
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-112
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 396 e-110
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 393 e-109
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 392 e-109
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-108
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 390 e-108
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 388 e-108
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 385 e-107
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-106
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 383 e-106
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 381 e-105
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 381 e-105
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 375 e-104
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 373 e-103
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 373 e-103
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 368 e-102
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 1e-99
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 2e-99
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 359 4e-99
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 4e-98
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 6e-97
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 1e-96
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 351 1e-96
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 2e-96
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 3e-96
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 347 2e-95
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 5e-95
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 343 2e-94
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 5e-94
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 341 1e-93
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 7e-92
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 4e-90
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 9e-89
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 5e-87
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 4e-86
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 1e-83
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 4e-82
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 9e-82
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 5e-81
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 292 5e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 6e-78
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 8e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 3e-77
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 285 6e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 9e-77
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 282 5e-76
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 6e-76
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 1e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 2e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 273 3e-73
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 267 1e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 5e-71
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 259 4e-69
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 258 8e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 4e-68
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 4e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 256 5e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 7e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 3e-66
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 249 4e-66
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 2e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 3e-65
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 244 1e-64
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 3e-62
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 4e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 2e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 229 4e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 7e-60
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 7e-60
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 6e-59
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 224 2e-58
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 4e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 5e-58
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 8e-57
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 218 2e-56
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 3e-56
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 5e-56
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 7e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 2e-54
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 209 5e-54
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 3e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 3e-50
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 6e-47
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 4e-43
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 172 6e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 7e-43
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 9e-43
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 2e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 7e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 4e-36
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 120 4e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 114 2e-25
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 108 2e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 9e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 9e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 9e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 3e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 101 2e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 100 3e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 7e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 95 2e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 93 8e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 4e-18
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 5e-17
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 5e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 6e-17
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 87 6e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 85 2e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 80 6e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 9e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 2e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 5e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 7e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 7e-12
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 68 3e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 2e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 1e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 4e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 5e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 58 2e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 8e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 51 3e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 50 4e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/707 (60%), Positives = 544/707 (76%), Gaps = 17/707 (2%)
Query: 1 MEIPLSRFQTISRDQFQDXXXXXXXXXXXXXRYCFASKVRYWRYPFSQIRCSSSMEQGLR 60
MEIPLSR+Q+I D+ +D F+ + R W+ PF ++ CSS + QGL+
Sbjct: 1 MEIPLSRYQSIRLDEIRDSSSNPKVLTFPRK---FSLRGRRWKNPFGRLSCSSVV-QGLK 56
Query: 61 PKPK------KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILEL 114
PKPK +I E K +L+D + K + +CSQIEKL LCNR++EA +LFEILE+
Sbjct: 57 PKPKLKPEPIRIEVKESKDQILDDTQISKSGVT-ICSQIEKLVLCNRFREAFELFEILEI 115
Query: 115 EGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLM 174
VG STYDALV C+ L+SIR VKRV+G+M+SNGFEP+ YMMNR+L MHV+CG++
Sbjct: 116 RC-SFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI 174
Query: 175 LDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRAS 234
+DAR+LF ++PER+ S+ ++ISG V+ GNY EAFE F MWEE +D + TFA M+RAS
Sbjct: 175 IDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRAS 234
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
AGLG I VG+Q+H CALK GV +++FV+C LIDMYSKCG IEDA+C F+ MPEK+TV WN
Sbjct: 235 AGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWN 294
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
++I+GYAL GYSEEAL + +MRDSG IDQFT+SI+IRI +LA LE KQAHA+L+R+
Sbjct: 295 NVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN 354
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
GF S+IVANT LVDFYSKWGR++ AR+VFD++ RKN+ISWNAL+ GY NHG+G A+++F
Sbjct: 355 GFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLF 414
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
E+M+ V PNHVTFLAVLSAC+YSGLSE+GWEIF SMS H +KPRAMHYACMIELLGR
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGR 474
Query: 475 EGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVML 534
+GLLDEA A IR AP++ T NMW ALL ACRM NL LG+ AEKLYGM P KL +YV++
Sbjct: 475 DGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVM 534
Query: 535 LNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK----SHTQTKEI 590
NMY+S GK EAAGVL+TL+ KGL+M+P C+W+EV Q ++FL GD+ + T ++I
Sbjct: 535 YNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Query: 591 YQKVDNLMDEISRHGYIEEHEMLLPDVDE-EEQRILKYHSEMLGIAYGLINTPDWTPLQI 649
YQKVD LM+EIS +GY EE + LLPDVDE EE+R+ +YHSE L IAYGL+NTP+W PLQI
Sbjct: 595 YQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQI 654
Query: 650 TQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
TQ HR+C NCH ++ I++VTGRE+VVRDASRFHHF+ G CSCG YW
Sbjct: 655 TQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 226/597 (37%), Positives = 352/597 (58%), Gaps = 4/597 (0%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y E++ LF L++ G T+ ++ VGL +++ ++ GF D +
Sbjct: 231 YTESIHLF--LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVG 288
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N++L + + +L+ R LF +MPE D VS+ +IS + Y + F M D
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
R+ FATM+ +A L +++GRQ+H AL V +L+DMY+KC E+A+ +
Sbjct: 349 RRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELI 408
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
F +P+++TV W ++ISGY +G L ++ +MR S + DQ T + V++ A ASL
Sbjct: 409 FKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASL 468
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
KQ HA ++R G ++ + +GLVD Y+K G ++DA VF+ M +N +SWNALI+ +
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAH 528
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
++G GE AI F +M+ + P+ V+ L VL+ACS+ G E+G E F +MS + + P+
Sbjct: 529 ADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPK 588
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY 521
HYACM++LLGR G EA L+ P EP + MW ++L ACR+H N L + AAEKL+
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Query: 522 GMEPGK-LSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
ME + ++YV + N+Y+++G+ + V K ++ +G+ +P SW+EV + + F
Sbjct: 649 SMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSN 708
Query: 581 DKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLI 639
D++H EI +K++ L EI R GY + ++ DVDE+ + LKYHSE L +A+ LI
Sbjct: 709 DQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALI 768
Query: 640 NTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+TP+ P+ + + R C +CH AIKLI+ + REI VRD SRFHHF G CSCGDYW
Sbjct: 769 STPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 203/434 (46%), Gaps = 6/434 (1%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFE--PD 157
+ + EA LF + T+ L+ C V +V + + GF+ P
Sbjct: 124 SHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPF 183
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
L + N +L + + A LF ++PE+D+V++ TLI+G G Y E+ FL M +
Sbjct: 184 LTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ 243
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+ TF+ +++A GL +G+Q+H+ ++ G D+ V ++D YSK + +
Sbjct: 244 SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLE 303
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ +FD+MPE V +N +IS Y+ E +L + EM+ G F + ++ I A
Sbjct: 304 TRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
L+SL+ +Q H + S + LVD Y+K E+A +F + ++ +SW AL
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTAL 423
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I+GY G +++F +M + + TF VL A + G ++ + R
Sbjct: 424 ISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN 483
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN--LVLGKF 515
++ + ++++ + G + +A + P + W AL++A +G+ +G F
Sbjct: 484 LE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 516 AAEKLYGMEPGKLS 529
A G++P +S
Sbjct: 542 AKMIESGLQPDSVS 555
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 4/260 (1%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF--LCMWEEF 219
N ++ HV+ G + AR LF MP+R V+W L+ + ++ EAF+ F +C
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF--VACALIDMYSKCGSIED 277
TF T++ Q+H+ A+K G + F V+ L+ Y + ++
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
A +F+++PEK +V +N++I+GY G E++ ++L+MR SG + FT S V++
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
L +Q HA V GF D ++DFYSK R+ + R +FD M + +S+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 398 IAGYGNHGQGEQAIEMFEQM 417
I+ Y Q E ++ F +M
Sbjct: 323 ISSYSQADQYEASLHFFREM 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAK 322
+I + K G + A+ +FD MP+++ V W ++ YA + +EA ++ +M R S
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 323 I-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD--IVANTGLVDFYSKWGRMEDA 379
+ D T + ++ C Q HA V+ GF ++ + + L+ Y + R++ A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 380 RHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+F+ + K+ +++N LI GY G ++I +F +M + P+ TF VL A
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+ V+ ++ + K G + AR +FD M + V++W L+ Y + ++A ++F QM
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 419 RER--VIPNHVTFLAVLSACS 437
R +P+HVTF +L C+
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCN 158
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/600 (37%), Positives = 361/600 (60%), Gaps = 6/600 (1%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
N +++A+ ++ ++L D T+ L+ C GL ++ + V + GF+ D++
Sbjct: 98 NHFQDALLMYSNMQLARVSPD--SFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 160 MMNRVLHMHVRCGLMLDARKLFA--DMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
+ N ++ ++ +C + AR +F +PER VSW ++S +G EA E F M +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+++ A L ++ GR IH+ +K G+ + + +L MY+KCG +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
A+ +FD+M + + WN++ISGYA GY+ EA+ ++ EM + + D +I+ I CA+
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+ SLE A+ + + R + D+ ++ L+D ++K G +E AR VFDR L ++V+ W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I GYG HG+ +AI ++ M R V PN VTFL +L AC++SG+ GW F M+ DHK
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHK 454
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAA 517
+ P+ HYAC+I+LLGR G LD+A+ +I+ PV+P +W ALL+AC+ H ++ LG++AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAF 577
++L+ ++P YV L N+Y+++ A V +K KGL CSW+EV+ + AF
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574
Query: 578 LCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV-DEEEQRILKYHSEMLGIAY 636
GDKSH + +EI ++V+ + + G++ + L D+ DEE + L HSE + IAY
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634
Query: 637 GLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
GLI+TP TPL+IT+ R C NCH A KLI+ + REIVVRD +RFHHF++G CSCGDYW
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 218/458 (47%), Gaps = 39/458 (8%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
+K++ ++ G + +++ +++H G + AR++F D+P W +I G
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+ ++ +A + M S TF +++A +GL +++GR +H+ + G D FV
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 262 ACALIDMYSKCGSIEDAQCVFD--QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
LI +Y+KC + A+ VF+ +PE++ V W +I+S YA G EAL I+ +MR
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
K D + V+ L L+ + HA++V+ G + L Y+K G++ A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 380 RHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS 439
+ +FD+M N+I WNA+I+GY +G +AI+MF +M+ + V P+ ++ + +SAC+
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 440 GLSERGWEIFYSMSR------------------------------DHKVKPRAMHYACMI 469
G E+ ++ + R D + + ++ MI
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 470 ELLGREGLLDEAFALIRS---APVEPTKNMWVALLTACRMHGNLVLGKFAAEKL--YGME 524
G G EA +L R+ V P ++ LL AC G + G + ++ + +
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKIN 456
Query: 525 PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK-RKGLTM 561
P + Y ++++ +G L +A V+K + + G+T+
Sbjct: 457 PQQ-QHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTV 493
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 105/262 (40%), Gaps = 42/262 (16%)
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+SG D F S++ + KQ HA L+ G T L+ S +G +
Sbjct: 15 NSGIHSDSFYASLIDSATHK----AQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
AR VFD + R + WNA+I GY + + A+ M+ M RV P+ TF +L AC
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKAC- 129
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMW 497
SGLS H R +H R G + F +N
Sbjct: 130 -SGLS-------------HLQMGRFVHAQVF-----RLGFDADVF----------VQNGL 160
Query: 498 VALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+AL CR G+ + E L + + S+ +++ Y+ +G+ MEA + +++
Sbjct: 161 IALYAKCRRLGS---ARTVFEGL-PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK- 215
Query: 558 GLTMLPTCSWIEVKKQPYAFLC 579
M W+ + AF C
Sbjct: 216 ---MDVKPDWVALVSVLNAFTC 234
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/609 (35%), Positives = 358/609 (58%), Gaps = 8/609 (1%)
Query: 89 LCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGY 148
L S+ +L AM + L+ G AD +TY L+ C+ R++ + +
Sbjct: 29 LLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD--SATYSELIKCCISNRAVHEGNLICRH 86
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
+ NG P ++++N +++M+V+ L+ DA +LF MP+R+ +SW T+IS + +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
E + M + T+++++R+ G+ + R +H +K G+ D FV ALID+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDV 203
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
++K G EDA VFD+M + WNSII G+A S+ AL ++ M+ +G +Q T+
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ V+R C LA LE QAH +V+ + D++ N LVD Y K G +EDA VF++M
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
++VI+W+ +I+G +G ++A+++FE+M PN++T + VL ACS++GL E GW
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYY 381
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F SM + + + P HY CMI+LLG+ G LD+A L+ EP W LL ACR+
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR 441
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
N+VL ++AA+K+ ++P +Y +L N+Y++S K + ++ +G+ P CSWI
Sbjct: 442 NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVD-EEEQRILKY 627
EV KQ +AF+ GD SH Q E+ +K++ L+ ++ GY+ E +L D++ E+ + L++
Sbjct: 502 EVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRH 561
Query: 628 HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRN 687
HSE L +A+GL+ P ++I + R+CG+CH KL + + R IV+RD R+HHF++
Sbjct: 562 HSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQD 621
Query: 688 GTCSCGDYW 696
G CSCGDYW
Sbjct: 622 GKCSCGDYW 630
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/626 (35%), Positives = 358/626 (57%), Gaps = 37/626 (5%)
Query: 108 LFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
L +E+ G + + +++ C + +R + V G+++ G + DLY N +++M
Sbjct: 90 LASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNM 149
Query: 168 HVR---------CGLMLD---------------------------ARKLFADMPERDAVS 191
+ + G + D R++F MP +D VS
Sbjct: 150 YAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVS 209
Query: 192 WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL 251
+ T+I+G SG Y +A M S T ++++ + + G++IH +
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 252 KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
++G+ D ++ +L+DMY+K IED++ VF ++ + + WNS+++GY G EAL
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
++ +M + K S VI CA LA+L KQ H ++R GFGS+I + LVD YS
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
K G ++ AR +FDRM + +SW A+I G+ HG G +A+ +FE+M R+ V PN V F+A
Sbjct: 390 KCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVA 449
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
VL+ACS+ GL + W F SM++ + + HYA + +LLGR G L+EA+ I VE
Sbjct: 450 VLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVE 509
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
PT ++W LL++C +H NL L + AEK++ ++ + +YV++ NMY+S+G+ E A +
Sbjct: 510 PTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLR 569
Query: 552 KTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHE 611
+++KGL P CSWIE+K + + F+ GD+SH +I + + +M+++ + GY+ +
Sbjct: 570 LRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTS 629
Query: 612 MLLPDVDEEEQRILKY-HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVT 670
+L DVDEE +R L + HSE L +A+G+INT T +++T+ R+C +CH AIK I+ +T
Sbjct: 630 GVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKIT 689
Query: 671 GREIVVRDASRFHHFRNGTCSCGDYW 696
REI+VRD SRFHHF G CSCGDYW
Sbjct: 690 EREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 156/418 (37%), Gaps = 94/418 (22%)
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
A +I +Y+ + +A +F + + W S+I + + +AL+ ++EMR SG
Sbjct: 42 ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGR 101
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRM----- 376
D V++ C + L + H +VR G D+ L++ Y+K M
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKIS 161
Query: 377 -------------------------------EDARHVFDRMLRKNVISWNALIAGYGNHG 405
+ R VF+ M RK+V+S+N +IAGY G
Sbjct: 162 VGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSG 221
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACS-----YSGLSERGWEIFYSMSRD----- 455
E A+ M +M + P+ T +VL S G G+ I + D
Sbjct: 222 MYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGS 281
Query: 456 ---------------HKVKPR-----AMHYACMIELLGREGLLDEAFALIR---SAPVEP 492
+V R + + ++ + G +EA L R +A V+P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 493 TKNMWVALLTACRMHGNLVLGKFAAEKLYG-MEPGKLSSYVM----LLNMYSSSGKLMEA 547
+ +++ AC L LGK +L+G + G S + L++MYS G + A
Sbjct: 342 GAVAFSSVIPACAHLATLHLGK----QLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAA 397
Query: 548 AGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHG 605
+ + +L SW A + G H E +L +E+ R G
Sbjct: 398 RKIFDR-----MNVLDEVSWT-------AIIMGHALHGHGHEAV----SLFEEMKRQG 439
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 345/578 (59%), Gaps = 2/578 (0%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
+LEG Y+ L+ C + + + V +++ + F D+ M N +L+M+ +CG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 173 LMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
+ +ARK+F MP+RD V+W TLISG +A F M T +++++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG 292
A+A G Q+H +K G + V AL+D+Y++ G ++DAQ VFD + ++ V
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
WN++I+G+A R +E+AL ++ M G + F+ + + C+ LE K HA ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
+ G A L+D Y+K G + DAR +FDR+ +++V+SWN+L+ Y HG G++A+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
FE+M R + PN ++FL+VL+ACS+SGL + GW + M +D + P A HY +++LL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408
Query: 473 GREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYV 532
GR G L+ A I P+EPT +W ALL ACRMH N LG +AAE ++ ++P +V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 533 MLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
+L N+Y+S G+ +AA V K +K G+ P CSW+E++ + F+ D+ H Q +EI +
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 593 KVDNLMDEISRHGYIEEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQ 651
K + ++ +I GY+ + ++ VD++E+ + L+YHSE + +A+ L+NTP + + I +
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 652 GHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGT 689
RVCG+CH AIKL + V GREI+VRD +RFHHF++ +
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/661 (32%), Positives = 370/661 (55%), Gaps = 40/661 (6%)
Query: 76 LEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLF-------EILELEGDGADVGGSTYDA 128
D P+ +E+L NR+ EA+D+ E ++L G STY
Sbjct: 31 FSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCN 90
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
L+ VC R++ K+V ++ ++GF P + + NR+L M+ +CG ++DARK+F +MP RD
Sbjct: 91 LIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRD 150
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEE------------------------------ 218
SW +++G + G EA + F M E+
Sbjct: 151 LCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 219 FNDGRSRTFATMVRASAGLGL--IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
+ R F + +A + I G++IH ++ G+ D + +L+DMY KCG I+
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
+A+ +FD++ EK V W S+I Y E S++ E+ S + +++T + V+ CA
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
L + E KQ H + R GF A++ LVD Y+K G +E A+HV D + +++SW +
Sbjct: 331 DLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTS 390
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
LI G +GQ ++A++ F+ +L+ P+HVTF+ VLSAC+++GL E+G E FYS++ H
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKH 450
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
++ + HY C+++LL R G ++ ++I P++P+K +W ++L C +GN+ L + A
Sbjct: 451 RLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYA 576
A++L+ +EP +YV + N+Y+++GK E + K ++ G+T P SW E+K++ +
Sbjct: 511 AQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHV 570
Query: 577 FLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV-DEEEQRILKYHSEMLGIA 635
F+ D SH +I + + L ++ GY+ ++L DV DE+++ L YHSE L +A
Sbjct: 571 FIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVA 630
Query: 636 YGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDY 695
+ +++T + T +++ + R C +CH AIK I+ +T R+I VRD++RFH F NG CSCGDY
Sbjct: 631 FAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDY 690
Query: 696 W 696
W
Sbjct: 691 W 691
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/562 (38%), Positives = 335/562 (59%)
Query: 135 GLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMT 194
LR I K + GY + +GF+ + + ++ M+ +CG + AR+LF M ER+ VSW +
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
+I V + N EA F M +E + + A A LG +E GR IH +++ G
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 255 VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYL 314
+ + V +LI MY KC ++ A +F ++ ++ V WN++I G+A G +AL+ +
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
+MR K D FT VI A L+ HAK H ++R ++ T LVD Y+K G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+ AR +FD M ++V +WNA+I GYG HG G+ A+E+FE+M + + PN VTFL+V+S
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 435 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK 494
ACS+SGL E G + FY M ++ ++ HY M++LLGR G L+EA+ I PV+P
Sbjct: 548 ACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 495 NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
N++ A+L AC++H N+ + AAE+L+ + P +V+L N+Y ++ + V ++
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 555 KRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLL 614
R+GL P CS +E+K + ++F G +H +K+IY ++ L+ I GY+ + ++L
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
Query: 615 PDVDEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREI 674
++ ++++L HSE L I++GL+NT T + + + RVC +CHNA K I++VTGREI
Sbjct: 728 GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 787
Query: 675 VVRDASRFHHFRNGTCSCGDYW 696
VVRD RFHHF+NG CSCGDYW
Sbjct: 788 VVRDMQRFHHFKNGACSCGDYW 809
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 234/481 (48%), Gaps = 16/481 (3%)
Query: 75 VLEDAHVMKPSTSGLC----SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALV 130
V E A V +P S L + ++ A + +A+ F + + V TY L+
Sbjct: 85 VDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LL 142
Query: 131 NVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAV 190
VC +R K + G ++ +GF DL+ M + +M+ +C + +ARK+F MPERD V
Sbjct: 143 KVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLV 202
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCA 250
SW T+++G +G A E M EE T +++ A + L LI VG++IH A
Sbjct: 203 SWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA 262
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEAL 310
++ G ++ AL+DMY+KCGS+E A+ +FD M E++ V WNS+I Y +EA+
Sbjct: 263 MRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAM 322
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
I+ +M D G K ++ + CA L LE + H V G ++ L+ Y
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
K ++ A +F ++ + ++SWNA+I G+ +G+ A+ F QM V P+ T++
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
+V++A + ++ I + R + ++++ + G + A LI
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRS-CLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMS 500
Query: 491 EPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLS----SYVMLLNMYSSSGKLME 546
E W A++ HG GK A E M+ G + +++ +++ S SG L+E
Sbjct: 501 ERHVTTWNAMIDGYGTHG---FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG-LVE 556
Query: 547 A 547
A
Sbjct: 557 A 557
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 116/205 (56%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
RQI K G+ ++ F L+ ++ + GS+++A VF+ + K V +++++ G+A
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
++AL ++ MR + + + ++++C A L K+ H LV+ GF D+ A
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
TGL + Y+K ++ +AR VFDRM ++++SWN ++AGY +G A+EM + M E +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 424 PNHVTFLAVLSACSYSGLSERGWEI 448
P+ +T ++VL A S L G EI
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEI 258
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/684 (32%), Positives = 357/684 (52%), Gaps = 73/684 (10%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P+ S I L + +++ +F + G D L VC L + + K
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD--SHVLPNLFKVCAELSAFKVGK 136
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAV------------- 190
++ +G + D ++ + HM++RCG M DARK+F M ++D V
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 191 ----------------------SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
SW ++SG SG + EA F + T +
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP-- 286
+++ + ++ +GR IH +K+G+ +D V A+IDMY K G + +F+Q
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM 316
Query: 287 ---------------------------------EKSTVGWNSIISGYALRGYSEEALSIY 313
E + V W SII+G A G EAL ++
Sbjct: 317 EAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELF 376
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
EM+ +G K + TI ++ C +A+L H + H VR ++ + L+D Y+K
Sbjct: 377 REMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436
Query: 374 GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
GR+ ++ VF+ M KN++ WN+L+ G+ HG+ ++ + +FE ++R R+ P+ ++F ++L
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 434 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT 493
SAC GL++ GW+ F MS ++ +KPR HY+CM+ LLGR G L EA+ LI+ P EP
Sbjct: 497 SACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556
Query: 494 KNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKT 553
+W ALL +CR+ N+ L + AAEKL+ +EP +YV+L N+Y++ G E +
Sbjct: 557 SCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNK 616
Query: 554 LKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEML 613
++ GL P CSWI+VK + Y L GDKSH Q +I +K+D + E+ + G+ +
Sbjct: 617 MESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFA 676
Query: 614 LPDVDEEEQ-RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGR 672
L DV+E+EQ ++L HSE L + +GL+NTPD TPLQ+ + R+CG+CH IK I+ GR
Sbjct: 677 LHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGR 736
Query: 673 EIVVRDASRFHHFRNGTCSCGDYW 696
EI +RD +RFHHF++G CSCGD+W
Sbjct: 737 EIFIRDTNRFHHFKDGICSCGDFW 760
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 203/521 (38%), Gaps = 125/521 (23%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
++ +G + D Y+ +++ + DA + +P+ S+ +LI L + + ++
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F M+ S + + A L +VG+QIH + G+ D+FV ++ M
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 269 YSKCGSIEDAQCVFDQMPEK-----------------------------------STVGW 293
Y +CG + DA+ VFD+M +K + V W
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR 353
N I+SG+ GY +EA+ ++ ++ G DQ T+S V+ L + H +++
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM--------------------------- 386
G D + ++D Y K G + +F++
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 387 --------LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
+ NV+SW ++IAG +G+ +A+E+F +M V PNHVT ++L AC
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 439 -----SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT 493
G S G+ + + + V + M GR L F ++ PT
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSALID---MYAKCGRINLSQIVFNMM------PT 451
Query: 494 KNM--WVALLTACRMHGNL--VLGKFAA-------------------------------- 517
KN+ W +L+ MHG V+ F +
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 518 ----EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+ YG++P +L Y ++N+ +GKL EA ++K +
Sbjct: 512 FKMMSEEYGIKP-RLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q H+ LK G D +++ LI YS DA V +P+ + ++S+I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+++ ++ M G D + + ++CA L++ + KQ H G D
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
+ Y + GRM DAR VFDRM K+V++ +AL+ Y G E+ + + +M +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 425 NHVTFLAVLSACSYSGLSERGWEIF 449
N V++ +LS + SG + +F
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMF 240
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/541 (37%), Positives = 333/541 (61%), Gaps = 9/541 (1%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D+ N ++ + + G + +AR+LF + P +D +W ++SG + + EA E F M
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
E + A V+ +E+ +++ R V +I Y++CG I
Sbjct: 309 ERNEVSWNAMLAGYVQGER----MEMAKELFDVMPCRNVS----TWNTMITGYAQCGKIS 360
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
+A+ +FD+MP++ V W ++I+GY+ G+S EAL ++++M G ++++ + S + CA
Sbjct: 361 EAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
+ +LE KQ H LV+ G+ + L+ Y K G +E+A +F M K+++SWN
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
+IAGY HG GE A+ FE M RE + P+ T +AVLSACS++GL ++G + FY+M++D+
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDY 540
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
V P + HYACM++LLGR GLL++A L+++ P EP +W LL A R+HGN L + A
Sbjct: 541 GVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETA 600
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYA 576
A+K++ MEP YV+L N+Y+SSG+ + + ++ KG+ +P SWIE++ + +
Sbjct: 601 ADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHT 660
Query: 577 FLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIA 635
F GD+ H + EI+ ++ L + + GY+ + ++L DV+EEE +R+++YHSE L +A
Sbjct: 661 FSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVA 720
Query: 636 YGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDY 695
YG++ P+++ + RVC +CHNAIK +A +TGR I++RD +RFHHF++G+CSCGDY
Sbjct: 721 YGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Query: 696 W 696
W
Sbjct: 781 W 781
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 179/445 (40%), Gaps = 105/445 (23%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ ++R G ARKLF +MPERD VSW +I G V + N +A E F M E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPER--- 155
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
D ++ Y++ G ++DA+ V
Sbjct: 156 ------------------------------------DVCSWNTMLSGYAQNGCVDDARSV 179
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIY------------------------LEMR 317
FD+MPEK+ V WN+++S Y EEA ++ +E R
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 318 ---DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
DS D + + +I A+ ++ A+Q L D+ T +V Y +
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ----LFDESPVQDVFTWTAMVSGYIQNR 295
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP--NHVTFLAV 432
+E+AR +FD+M +N +SWNA++AGY + E A E+F+ V+P N T+ +
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFD------VMPCRNVSTWNTM 349
Query: 433 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEP 492
++ + G +F M + V +A MI + G EA L E
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 493 ---TKNMWVALLTAC----------RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
++ + + L+ C ++HG LV G G E G +LL MY
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKG--------GYETGCFVGNALLL-MYC 455
Query: 540 SSGKLMEAAGVLKTLKRKGLTMLPT 564
G + EA + K + K + T
Sbjct: 456 KCGSIEEANDLFKEMAGKDIVSWNT 480
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA+ LF +++E +G + S++ + ++ C + ++ K++ G ++ G+E ++ N
Sbjct: 392 EALRLF--VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNA 449
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
+L M+ +CG + +A LF +M +D VSW T+I+G G A F M E
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD 509
Query: 224 SRTFATMVRASAGLGLIEVGRQ-IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
T ++ A + GL++ GRQ ++ GV +S ++D+ + G +EDA +
Sbjct: 510 DATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLM 569
Query: 283 DQMP-EKSTVGWNSIISGYALRGYSEEA 309
MP E W +++ + G +E A
Sbjct: 570 KNMPFEPDAAIWGTLLGASRVHGNTELA 597
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/617 (35%), Positives = 358/617 (58%), Gaps = 19/617 (3%)
Query: 97 ALCNRYK--EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG- 153
+LC + EA++ + LEG D T +++ C L +R K + Y + NG
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPD--EFTISSVLPACSHLEMLRTGKELHAYALKNGS 333
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
+ + ++ + ++ M+ C +L R++F M +R W +I+G + + EA F+
Sbjct: 334 LDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFI 393
Query: 214 CMWEEFND-GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
M E S T A +V A G IH +KRG+ D FV L+DMYS+
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRL 453
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD------SGA----- 321
G I+ A +F +M ++ V WN++I+GY + E+AL + +M++ GA
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
K + T+ ++ CA L++L K+ HA +++ +D+ + LVD Y+K G ++ +R
Sbjct: 514 KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
VFD++ +KNVI+WN +I YG HG G++AI++ M+ + V PN VTF++V +ACS+SG+
Sbjct: 574 VFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGM 633
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK-NMWVAL 500
+ G IFY M D+ V+P + HYAC+++LLGR G + EA+ L+ P + K W +L
Sbjct: 634 VDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSL 693
Query: 501 LTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
L A R+H NL +G+ AA+ L +EP S YV+L N+YSS+G +A V + +K +G+
Sbjct: 694 LGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVR 753
Query: 561 MLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE 620
P CSWIE + + F+ GD SH Q++++ ++ L + + + GY+ + +L +V+E+
Sbjct: 754 KEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEED 813
Query: 621 EQRILKY-HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDA 679
E+ IL HSE L IA+G++NT T +++ + RVC +CH A K I+ + REI++RD
Sbjct: 814 EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDV 873
Query: 680 SRFHHFRNGTCSCGDYW 696
RFH F+NGTCSCGDYW
Sbjct: 874 RRFHRFKNGTCSCGDYW 890
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 12/350 (3%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPD-LYMMNRVLHMHVRCGLMLDARKLFAD 183
+ AL+ L+ + K++ ++ G+ D + + N +++++ +CG K+F
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE-- 241
+ ER+ VSW +LIS L + A E F CM +E + S T ++V A + L + E
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 242 -VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+G+Q+H+ L++G +SF+ L+ MY K G + ++ + + V WN+++S
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG-FGSD 359
EAL EM G + D+FTIS V+ C+ L L K+ HA +++G +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ LVD Y ++ R VFD M + + WNA+IAGY + ++A+ +F M
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 420 ER-VIPNHVTFLAVLSACSYSGLSER-----GWEIFYSMSRDHKVKPRAM 463
++ N T V+ AC SG R G+ + + RD V+ M
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
W ++ EA+ Y++M G K D + +++ A L +E KQ HA +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 353 RHGFGSD--IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQA 410
+ G+G D VANT LV+ Y K G VFDR+ +N +SWN+LI+ + + E A
Sbjct: 125 KFGYGVDSVTVANT-LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
+E F ML E V P+ T ++V++ACS + E
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 320/539 (59%), Gaps = 4/539 (0%)
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE 218
Y++ + ++ +CG + LF + + D V++ +I G +G + F +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
RS T ++V S L LI IH LK + V+ AL +YSK IE A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+ +FD+ PEKS WN++ISGY G +E+A+S++ EM+ S + TI+ ++ CA+L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALI 398
+L K H + F S I +T L+ Y+K G + +AR +FD M +KN ++WN +I
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 458
+GYG HGQG++A+ +F +ML + P VTFL VL ACS++GL + G EIF SM +
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 459 KPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAE 518
+P HYACM+++LGR G L A I + +EP ++W LL ACR+H + L + +E
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 519 KLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFL 578
KL+ ++P + +V+L N++S+ +AA V +T K++ L P + IE+ + P+ F
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFT 673
Query: 579 CGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRIL-KYHSEMLGIAYG 637
GD+SH Q KEIY+K++ L ++ GY E E+ L DV+EEE+ ++ K HSE L IA+G
Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFG 733
Query: 638 LINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
LI T T ++I + RVC +CH KLI+ +T R IVVRDA+RFHHF++G CSCGDYW
Sbjct: 734 LIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 212/463 (45%), Gaps = 41/463 (8%)
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
STY ++ G R R + + G + +G + +L + + ++ M+ + + DARK+F
Sbjct: 118 NSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVF 177
Query: 182 ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF-NDGRSRTFATMVRASAGLGLI 240
MPE+D + W T+ISG + Y E+ + F + E + T ++ A A L +
Sbjct: 178 DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQEL 237
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+G QIHS A K G +V I +YSKCG I+ +F + + V +N++I GY
Sbjct: 238 RLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G +E +LS++ E+ SGA++ T+ ++ + L + H ++ F S
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHA 354
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
+T L YSK +E AR +FD K++ SWNA+I+GY +G E AI +F +M +
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 421 RVIPNHVTFLAVLSACSYSG-LSERGW------------EIFYSMSR------------- 454
PN VT +LSAC+ G LS W I+ S +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 455 ----DHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTACRMH 507
D K + + MI G G EA F + ++ + PT ++ +L AC
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 508 GNLVLGKFAAEKL---YGMEPGKLSSYVMLLNMYSSSGKLMEA 547
G + G + YG EP + Y ++++ +G L A
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPS-VKHYACMVDILGRAGHLQRA 576
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 207/459 (45%), Gaps = 43/459 (9%)
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLIS 197
SI + + +I +GF D+ ++ ++ G + AR +F + D + L+
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 198 GLVDSGNYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG 256
G + + + F + + + S T+A + A++G GR IH A+ G
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 257 EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM 316
+ + ++ MY K +EDA+ VFD+MPEK T+ WN++ISGY E++ ++ ++
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 317 -RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
+S ++D T+ ++ A L L Q H+ + G S TG + YSK G+
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML----RER------VIP- 424
++ +F + +++++NA+I GY ++G+ E ++ +F++++ R R ++P
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV 331
Query: 425 -----------------NHVTFLAVLSACS--YSGLS--ERGWEIFYSMSRDHKVKPRAM 463
N ++ +V +A + YS L+ E ++F D +
Sbjct: 332 SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF-----DESPEKSLP 386
Query: 464 HYACMIELLGREGLLDEAFALIR---SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
+ MI + GL ++A +L R + P +L+AC G L LGK+ + +
Sbjct: 387 SWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Query: 521 YGME-PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
+ + L+ MY+ G + EA + + +K
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 9/332 (2%)
Query: 105 AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRV 164
++ LF+ EL GA + ST +LV V L I + GY + + F + +
Sbjct: 306 SLSLFK--ELMLSGARLRSSTLVSLVPVSGHLMLIYAIH---GYCLKSNFLSHASVSTAL 360
Query: 165 LHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS 224
++ + + ARKLF + PE+ SW +ISG +G +A F M +
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
T ++ A A LG + +G+ +H +V+ ALI MY+KCGSI +A+ +FD
Sbjct: 421 VTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDL 480
Query: 285 MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
M +K+ V WN++ISGY L G +EAL+I+ EM +SG T V+ C+ ++
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 345 KQAHAALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYG 402
+ +++ R+GF + +VD + G ++ A + M + W L+
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
H A + E++ + P++V + +LS
Sbjct: 601 IHKDTNLARTVSEKLF--ELDPDNVGYHVLLS 630
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
R S+ H Q HA ++ HGF +DI T L S G + AR +F + R +V +N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACS 437
L+ G+ + ++ +F + + + PN T+ +SA S
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 410 bits (1053), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/606 (36%), Positives = 349/606 (57%), Gaps = 34/606 (5%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA------- 177
T+ ++ C ++ + +++ G+++ G + DLY+ ++ M+V+ G + DA
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 178 ------------------------RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
+KLF ++P +D VSW +ISG ++GNY EA E F
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG 273
M + T T+V A A G IE+GRQ+H G G + + ALID+YSKCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 274 SIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIR 333
+E A +F+++P K + WN++I GY +EAL ++ EM SG + T+ ++
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 334 ICARLASLEHAKQAHAALVRH--GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
CA L +++ + H + + G + T L+D Y+K G +E A VF+ +L K++
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
SWNA+I G+ HG+ + + ++F +M + + P+ +TF+ +LSACS+SG+ + G IF +
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 495
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV 511
M++D+K+ P+ HY CMI+LLG GL EA +I +EP +W +LL AC+MHGN+
Sbjct: 496 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 555
Query: 512 LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVK 571
LG+ AE L +EP SYV+L N+Y+S+G+ E A L KG+ +P CS IE+
Sbjct: 556 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Query: 572 KQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE-EQRILKYHSE 630
+ F+ GDK H + +EIY ++ + + + G++ + +L +++EE ++ L++HSE
Sbjct: 616 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 675
Query: 631 MLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTC 690
L IA+GLI+T T L I + RVC NCH A KLI+ + REI+ RD +RFHHFR+G C
Sbjct: 676 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 735
Query: 691 SCGDYW 696
SC DYW
Sbjct: 736 SCNDYW 741
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/467 (28%), Positives = 226/467 (48%), Gaps = 44/467 (9%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRC----GLMLDARKLFAD 183
+L++ C L+S+R + MI G Y +++++ + GL A +F
Sbjct: 38 SLLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPY-AISVFKT 93
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ E + + W T+ G S + A + ++CM S TF ++++ A + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+QIH LK G D +V +LI MY + G +EDA VFD+ P + V + ++I GYA R
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 304 GYSE-------------------------------EALSIYLEMRDSGAKIDQFTISIVI 332
GY E EAL ++ +M + + D+ T+ V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
CA+ S+E +Q H + HGFGS++ L+D YSK G +E A +F+R+ K+VI
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG-WEIFYS 451
SWN LI GY + ++A+ +F++MLR PN VT L++L AC++ G + G W Y
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG--N 509
R V + +I++ + G ++ A + S + + + W A++ MHG +
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 452
Query: 510 LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
F+ + G++P + ++V LL+ S SG L + +T+ +
Sbjct: 453 ASFDLFSRMRKIGIQPDDI-TFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 164/389 (42%), Gaps = 74/389 (19%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIED---AQCVFDQMPEKSTVGWNSIISGY 300
R IH+ +K G+ ++ LI+ E A VF + E + + WN++ G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
AL AL +Y+ M G + +T V++ CA+ + + +Q H +++ G D+
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 361 VANTGLVDFYSKWGRMEDARHVFDR-------------------------------MLRK 389
+T L+ Y + GR+EDA VFD+ + K
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
+V+SWNA+I+GY G ++A+E+F+ M++ V P+ T + V+SAC+ SG E G ++
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE------------------ 491
+ DH +I+L + G L+ A L P +
Sbjct: 290 LWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 492 ----------------PTKNMWVALLTACRMHGNLVLGK----FAAEKLYGMEPGKLSSY 531
P +++L AC G + +G+ + ++L G+ S
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS-SLR 407
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
L++MY+ G + A V ++ K L+
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/524 (37%), Positives = 320/524 (61%), Gaps = 4/524 (0%)
Query: 177 ARKLFADMPER-DAVSWMTLISGLVDSGNYAEAFEQFLCM-WEEFNDGRSRTFATMVRAS 234
A K+F+ + + + W TLI G + GN AF + M + + T+ +++A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
+ + +G IHS ++ G G +V +L+ +Y+ CG + A VFD+MPEK V WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
S+I+G+A G EEAL++Y EM G K D FTI ++ CA++ +L K+ H +++
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
G ++ ++ L+D Y++ GR+E+A+ +FD M+ KN +SW +LI G +G G++AIE+F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 415 EQM-LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
+ M E ++P +TF+ +L ACS+ G+ + G+E F M ++K++PR H+ CM++LL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 474 REGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM 533
R G + +A+ I+S P++P +W LL AC +HG+ L +FA ++ +EP YV+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 534 LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQK 593
L NMY+S + + + K + R G+ +P S +EV + + FL GDKSH Q+ IY K
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 594 VDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIAYGLINTPDWTPLQITQG 652
+ + + GY+ + + DV+EEE + + YHSE + IA+ LI+TP+ +P+ + +
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 653 HRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
RVC +CH AIKL++ V REIVVRD SRFHHF+NG+CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 163/324 (50%), Gaps = 27/324 (8%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L+ + +R + + +I +GF +Y+ N +LH++ CG + A K+F M
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
PE+D V+W ++I+G ++G EA + M + T +++ A A +G + +G+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
++H +K G+ + + L+D+Y++CG +E+A+ +FD+M +K++V W S+I G A+ G
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 305 YSEEALSIYLEMRDSGAKID-QFTISIVIRICARLASLEHAKQAHAALVRHGFG------ 357
+ +EA+ ++ M + + + T ++ C +H +V+ GF
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYAC-----------SHCGMVKEGFEYFRRMR 351
Query: 358 -----SDIVANTG-LVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQA 410
+ + G +VD ++ G+++ A M ++ NV+ W L+ HG + A
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Query: 411 IEMFEQMLRERVIPNHVTFLAVLS 434
F ++ ++ PNH +LS
Sbjct: 412 --EFARIQILQLEPNHSGDYVLLS 433
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I A + +EA+ L+ E+ G G T +L++ C + ++ KRV YMI
Sbjct: 192 SVINGFAENGKPEEALALYT--EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
G +L+ N +L ++ RCG + +A+ LF +M ++++VSW +LI GL +G EA E
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 211 QFLCMWEEFNDGR---SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF--VACAL 265
F M E +G TF ++ A + G+++ G + + E C +
Sbjct: 310 LFKYM--ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC-M 366
Query: 266 IDMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYALRGYSEEA 309
+D+ ++ G ++ A MP + + V W +++ + G S+ A
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/611 (36%), Positives = 353/611 (57%), Gaps = 16/611 (2%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I +L R +EA+ LE+ G ++G YDAL+N C+ R++R +RV +MI
Sbjct: 27 ISQLCSNGRLQEAL-----LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKT 81
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
+ P Y+ R+L + +C + DARK+ +MPE++ VSW +IS +G+ +EA F
Sbjct: 82 RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 213 LCMWEEFNDGRSRTFATM----VRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
M TFAT+ +RAS GLGL G+QIH +K FV +L+DM
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRAS-GLGL---GKQIHGLIVKWNYDSHIFVGSSLLDM 197
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
Y+K G I++A+ +F+ +PE+ V +II+GYA G EEAL ++ + G + T
Sbjct: 198 YAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ ++ + LA L+H KQAH ++R V L+D YSK G + AR +FD M
Sbjct: 258 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE 317
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWE 447
+ ISWNA++ GY HG G + +E+F M E RV P+ VT LAVLS CS+ + + G
Sbjct: 318 RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLN 377
Query: 448 IFYSM-SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRM 506
IF M + ++ KP HY C++++LGR G +DEAF I+ P +PT + +LL ACR+
Sbjct: 378 IFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRV 437
Query: 507 HGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCS 566
H ++ +G+ +L +EP +YV+L N+Y+S+G+ + V + +K +T P S
Sbjct: 438 HLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRS 497
Query: 567 WIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-QRIL 625
WI+ ++ + F D++H + +E+ K+ + ++ + GY+ + +L DVDEE+ +++L
Sbjct: 498 WIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKML 557
Query: 626 KYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHF 685
HSE L + +GLI T + P+++ + R+C +CHN K+ + V RE+ +RD +RFH
Sbjct: 558 LGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQI 617
Query: 686 RNGTCSCGDYW 696
+G CSCGDYW
Sbjct: 618 VDGICSCGDYW 628
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 347/604 (57%), Gaps = 5/604 (0%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSI-RGVKRVFGYMISNGFE 155
A+ + Y ++ + E L L + T +L++ C RGV + Y I +G E
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLE 279
Query: 156 PDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM 215
+L++ N+++ ++ G + D +K+F M RD +SW ++I + A F M
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG-VGEDSFVACALIDMYSKCGS 274
T ++ + LG I R + L++G ED + A++ MY+K G
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 275 IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA-KIDQFTISIVIR 333
++ A+ VF+ +P + WN+IISGYA G++ EA+ +Y M + G +Q T V+
Sbjct: 400 VDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLP 459
Query: 334 ICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS 393
C++ +L + H L+++G D+ T L D Y K GR+EDA +F ++ R N +
Sbjct: 460 ACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP 519
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 453
WN LIA +G HG GE+A+ +F++ML E V P+H+TF+ +LSACS+SGL + G F M
Sbjct: 520 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQ 579
Query: 454 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG 513
D+ + P HY CM+++ GR G L+ A I+S ++P ++W ALL+ACR+HGN+ LG
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLG 639
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
K A+E L+ +EP + +V+L NMY+S+GK + KGL P S +EV +
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Query: 574 PYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV-DEEEQRILKYHSEML 632
F G+++H +E+Y+++ L ++ GY+ +H +L DV D+E++ IL HSE L
Sbjct: 700 VEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERL 759
Query: 633 GIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSC 692
IA+ LI TP T ++I + RVCG+CH+ K I+ +T REI+VRD++RFHHF+NG CSC
Sbjct: 760 AIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSC 819
Query: 693 GDYW 696
GDYW
Sbjct: 820 GDYW 823
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/469 (28%), Positives = 225/469 (47%), Gaps = 48/469 (10%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ +++ C R++ ++ + GF D+Y+ ++H++ R + +AR LF +M
Sbjct: 155 TFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM 211
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RD SW +ISG SGN EA L + S T +++ A G G
Sbjct: 212 PVRDMGSWNAMISGYCQSGNAKEA----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGV 267
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
IHS ++K G+ + FV+ LID+Y++ G + D Q VFD+M + + WNSII Y L
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNE 327
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG-FGSDIVAN 363
A+S++ EMR S + D T+ + I ++L + + +R G F DI
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RV 422
+V Y+K G ++ AR VF+ + +VISWN +I+GY +G +AIEM+ M E +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
N T+++VL ACS +G +G ++ + ++ + + ++ G+ G L++A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDAL 506
Query: 483 ALIRSAP----------------------------------VEPTKNMWVALLTACRMHG 508
+L P V+P +V LL+AC G
Sbjct: 507 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
Query: 509 NLVLGKFAAEKL---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+ G++ E + YG+ P L Y +++MY +G+L A +K++
Sbjct: 567 LVDEGQWCFEMMQTDYGITP-SLKHYGCMVDMYGRAGQLETALKFIKSM 614
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 205/435 (47%), Gaps = 52/435 (11%)
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF-LCMWEEFND 221
++++++ G + AR F + RD +W +ISG +GN +E F L M
Sbjct: 91 KLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT 150
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
RTF ++++A + G +IH ALK G D +VA +LI +YS+ ++ +A+ +
Sbjct: 151 PDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
FD+MP + WN++ISGY G ++EAL++ +R +D T+ ++ C
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDF 263
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
H+ ++HG S++ + L+D Y+++GR+ D + VFDRM +++ISWN++I Y
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS---------AC-SYSGLSERGWEIFYS 451
+ Q +AI +F++M R+ P+ +T +++ S AC S G + R
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 452 MSRDHKV---------------------KPRAMHYACMIELLGREGLLDEAFALIR---- 486
++ + V + + +I + G EA +
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 487 SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYG--MEPG-KLSSYVM--LLNMYSSS 541
+ + WV++L AC G L G KL+G ++ G L +V+ L +MY
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGM----KLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 542 GKLMEAAGVLKTLKR 556
G+L +A + + R
Sbjct: 500 GRLEDALSLFYQIPR 514
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIY-LEMRDS 319
++ L+++Y G++ A+ FD + + WN +ISGY G S E + + L M S
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G D T V++ C + + H ++ GF D+ L+ YS++ + +A
Sbjct: 148 GLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 380 RHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS 439
R +FD M +++ SWNA+I+GY G ++A+ + LR + VT +++LSAC+ +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-SNGLRAM---DSVTVVSLLSACTEA 260
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
G RG I +S S H ++ +I+L G L
Sbjct: 261 GDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
G +R +S A ++ ++ + + + R C L S AK HA LV
Sbjct: 28 GSVIREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQS---AKCLHARLVVSKQIQ 84
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ-M 417
++ + LV+ Y G + ARH FD + ++V +WN +I+GYG G + I F M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 418 LRERVIPNHVTFLAVLSAC 436
L + P++ TF +VL AC
Sbjct: 145 LSSGLTPDYRTFPSVLKAC 163
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/636 (35%), Positives = 362/636 (56%), Gaps = 12/636 (1%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
K G+V RK +L D +K S S I A EA+ +F + L + + S
Sbjct: 241 KCGNV-RKARILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRL--NYVRLSES 296
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
++ +++ +C L+ +R +++ ++ GF D + ++ + +C MLDA +LF ++
Sbjct: 297 SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 185 P-ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ VSW +ISG + + EA + F M + T++ ++ A + EV
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEV- 415
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
H+ +K S V AL+D Y K G +E+A VF + +K V W+++++GYA
Sbjct: 416 ---HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL-ASLEHAKQAHAALVRHGFGSDIVA 362
G +E A+ ++ E+ G K ++FT S ++ +CA AS+ KQ H ++ S +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
++ L+ Y+K G +E A VF R K+++SWN++I+GY HGQ +A+++F++M + +V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
+ VTF+ V +AC+++GL E G + F M RD K+ P H +CM++L R G L++A
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+I + P +W +L ACR+H LG+ AAEK+ M+P ++YV+L NMY+ SG
Sbjct: 653 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 712
Query: 543 KLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEIS 602
E A V K + + + P SWIEVK + Y+FL GD+SH +IY K+++L +
Sbjct: 713 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Query: 603 RHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHN 661
GY + +L D+D+E ++ +L HSE L IA+GLI TP +PL I + RVCG+CH
Sbjct: 773 DLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHL 832
Query: 662 AIKLIAMVTGREIVVRDASRFHHF-RNGTCSCGDYW 696
IKLIA + REIVVRD++RFHHF +G CSCGD+W
Sbjct: 833 VIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 234/491 (47%), Gaps = 34/491 (6%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R +EA LF L + G ++ S + +++ V L +++ I GF D+ +
Sbjct: 73 RTQEAKRLF--LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV 130
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
++ +++ D RK+F +M ER+ V+W TLISG + E F+ M E
Sbjct: 131 GTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT 190
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
S TFA + A G+ G Q+H+ +K G+ + V+ +LI++Y KCG++ A+
Sbjct: 191 QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
+FD+ KS V WNS+ISGYA G EAL ++ MR + ++ + + + VI++CA L
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIA 399
L +Q H ++V++GF D T L+ YSK M DA +F + NV+SW A+I+
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA---------------CSYSGLSER 444
G+ + E+A+++F +M R+ V PN T+ +L+A +Y S
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTV 430
Query: 445 GWEIFYSMSRDHKVKPRA-----------MHYACMIELLGREGLLDEA---FALIRSAPV 490
G + + + KV+ A + ++ M+ + G + A F + +
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 491 EPTKNMWVALLTAC-RMHGNLVLGK-FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
+P + + ++L C + ++ GK F + L LL MY+ G + A
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 549 GVLKTLKRKGL 559
V K + K L
Sbjct: 551 EVFKRQREKDL 561
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 90/172 (52%)
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
+A +FD+ P + + S++ G++ G ++EA ++L + G ++D S V+++ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
L +Q H ++ GF D+ T LVD Y K +D R VFD M +NV++W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
LI+GY + ++ + +F +M E PN TF A L + G+ RG ++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/538 (37%), Positives = 318/538 (59%), Gaps = 2/538 (0%)
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
M N ++ + CG++ DA +LF M E+D+VSW +I GL +G EA E F M +
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
F +++ A GLG I G+QIH+C ++ + +V ALIDMY KC + A+
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 280 CVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
VFD+M +K+ V W +++ GY G +EEA+ I+L+M+ SG D +T+ I CA ++
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
SLE Q H + G + + LV Y K G ++D+ +F+ M ++ +SW A+++
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
Y G+ + I++F++M++ + P+ VT V+SACS +GL E+G F M+ ++ +
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 460 PRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK 519
P HY+CMI+L R G L+EA I P P W LL+ACR GNL +GK+AAE
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAES 565
Query: 520 LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLC 579
L ++P + Y +L ++Y+S GK A + + ++ K + P SWI+ K + ++F
Sbjct: 566 LIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSA 625
Query: 580 GDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGL 638
D+S +IY K++ L ++I +GY + + DV+E + ++L YHSE L IA+GL
Sbjct: 626 DDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGL 685
Query: 639 INTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
I P P+++ + RVC +CHNA K I+ VTGREI+VRDA RFH F++GTCSCGD+W
Sbjct: 686 IFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 206/437 (47%), Gaps = 47/437 (10%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
Y+ +V+ ++S +RVF + +P+L+ N +L + + GL+ + F +P
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGR 244
+RD V+W LI G SG A + + M +F+ +R T TM++ S+ G + +G+
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP------------------ 286
QIH +K G V L+ MY+ G I DA+ VF +
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 287 ------------EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRI 334
EK +V W ++I G A G ++EA+ + EM+ G K+DQ+ V+
Sbjct: 220 MIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 335 CARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISW 394
C L ++ KQ HA ++R F I + L+D Y K + A+ VFDRM +KNV+SW
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
A++ GYG G+ E+A+++F M R + P+H T +SAC+ E G S
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFH 394
Query: 455 DHKVKPRAMHYAC----MIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
+ +HY ++ L G+ G +D++ L V + W A+++A G
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRA 453
Query: 511 V--LGKFAAEKLYGMEP 525
V + F +G++P
Sbjct: 454 VETIQLFDKMVQHGLKP 470
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 177/359 (49%), Gaps = 12/359 (3%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRG 141
M+ + + I+ LA KEA++ F ++++G D + +++ C GL +I
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMD--QYPFGSVLPACGGLGAINE 288
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
K++ +I F+ +Y+ + ++ M+ +C + A+ +F M +++ VSW ++ G
Sbjct: 289 GKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQ 348
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+G EA + FL M D T + A A + +E G Q H A+ G+ V
Sbjct: 349 TGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTV 408
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
+ +L+ +Y KCG I+D+ +F++M + V W +++S YA G + E + ++ +M G
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG----LVDFYSKWGRME 377
K D T++ VI C+R A L Q + L+ +G IV + G ++D +S+ GR+E
Sbjct: 469 KPDGVTLTGVISACSR-AGLVEKGQRYFKLMTSEYG--IVPSIGHYSCMIDLFSRSGRLE 525
Query: 378 DARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+A + M + I W L++ N G E E ++ + P+H +LS+
Sbjct: 526 EAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI--ELDPHHPAGYTLLSS 582
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 158/374 (42%), Gaps = 47/374 (12%)
Query: 224 SRTFATMVRASAGLGLIEVGR---QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
S ++ ++ GLG R IH ++ ++F+ ++ Y+ S A+
Sbjct: 3 SNYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR 62
Query: 281 VFD-------------------------------QMPEKSTVGWNSIISGYALRGYSEEA 309
VFD ++P++ V WN +I GY+L G A
Sbjct: 63 VFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAA 122
Query: 310 LSIY-LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
+ Y MRD A + + T+ ++++ + + KQ H +++ GF S ++ + L+
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 369 FYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
Y+ G + DA+ VF + +N + +N+L+ G G E A+++F M ++ V+
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-----VS 237
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALI 485
+ A++ + +GL++ E F M + +K + ++ G G ++E A I
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
+ + AL+ M+ +A M+ + S+ ++ Y +G+
Sbjct: 297 IRTNFQDHIYVGSALID---MYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 546 EAAGVLKTLKRKGL 559
EA + ++R G+
Sbjct: 354 EAVKIFLDMQRSGI 367
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/604 (35%), Positives = 348/604 (57%), Gaps = 14/604 (2%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+EA+ F + L G +D T ++ + C L ++ K++ + I +G D+
Sbjct: 251 REAIRFFLDMVLSGFESD--KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC-- 306
Query: 163 RVLHMHVRC---GLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA-EAFEQFLCMWEE 218
++ M+ +C G + D RK+F M + +SW LI+G + + N A EA F M +
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 219 FN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+ + TF++ +A L VG+Q+ A KRG+ +S VA ++I M+ K +ED
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
AQ F+ + EK+ V +N+ + G E+A + E+ + + FT + ++ A
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+ S+ +Q H+ +V+ G + L+ YSK G ++ A VF+ M +NVISW ++
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I G+ HG + +E F QM+ E V PN VT++A+LSACS+ GL GW F SM DHK
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAA 517
+KP+ HYACM++LL R GLL +AF I + P + +W L ACR+H N LGK AA
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAF 577
K+ ++P + ++Y+ L N+Y+ +GK E+ + + +K + L CSWIEV + + F
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKF 726
Query: 578 LCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV-----DEEEQRILKYHSEML 632
GD +H +IY ++D L+ EI R GY+ + +++L + + E++R+L HSE +
Sbjct: 727 YVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKI 786
Query: 633 GIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSC 692
+A+GLI+T P+++ + RVCG+CHNA+K I+ V+GREIV+RD +RFHHF++G CSC
Sbjct: 787 AVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSC 846
Query: 693 GDYW 696
DYW
Sbjct: 847 NDYW 850
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 184/369 (49%), Gaps = 19/369 (5%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDL---FEILELEG-DGA-DVGGSTYDALVNVCVGLR 137
+PS S + ++L L R+ A DL L+L DG + T+ +L+ C+ R
Sbjct: 19 QPSVSNRINVADRLIL--RHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRAR 76
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM---PERDAVSWMT 194
R K V +I EPD + N ++ ++ + G A +F M +RD VSW
Sbjct: 77 DFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
+++ ++G +A + F+ E + ++RA + + VGR +K G
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 255 VGE-DSFVACALIDMYSKC-GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
E D V C+LIDM+ K S E+A VFD+M E + V W +I+ G+ EA+
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+L+M SG + D+FT+S V CA L +L KQ H+ +R G D+ LVD Y+K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAK 314
Query: 373 W---GRMEDARHVFDRMLRKNVISWNALIAGY-GNHGQGEQAIEMFEQMLRE-RVIPNHV 427
G ++D R VFDRM +V+SW ALI GY N +AI +F +M+ + V PNH
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 428 TFLAVLSAC 436
TF + AC
Sbjct: 375 TFSSAFKAC 383
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 20/293 (6%)
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
L RD +D T S +++ C R K HA L+ D V L+ YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 374 GRMEDARHVFDRMLR---KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
G A VF+ M R ++V+SW+A++A YGN+G+ AI++F + L ++PN +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR-EGLLDEAFALIRSAP 489
AV+ ACS S G + + + +I++ + E + A+ +
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 490 VEPTKNMWVALLTACRMHG--NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEA 547
E W ++T C G + F L G E K + L +++S+ +L E
Sbjct: 231 -ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT----LSSVFSACAEL-EN 284
Query: 548 AGVLKTLK----RKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
+ K L R GL CS +++ YA D S ++++ ++++
Sbjct: 285 LSLGKQLHSWAIRSGLVDDVECSLVDM----YAKCSADGSVDDCRKVFDRMED 333
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/555 (37%), Positives = 328/555 (59%), Gaps = 2/555 (0%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K+V + I D ++ ++ + R M +A LF + D V+W +++G S
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQS 495
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
+ + + F M ++ T AT+ + L I G+Q+H+ A+K G D +V+
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
++DMY KCG + AQ FD +P V W ++ISG G E A ++ +MR G
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
D+FTI+ + + + L +LE +Q HA ++ +D T LVD Y+K G ++DA +
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL 675
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
F R+ N+ +WNA++ G HG+G++ +++F+QM + P+ VTF+ VLSACS+SGL
Sbjct: 676 FKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 443 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT 502
++ SM D+ +KP HY+C+ + LGR GL+ +A LI S +E + +M+ LL
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
Query: 503 ACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTML 562
ACR+ G+ GK A KL +EP S+YV+L NMY+++ K E +K +
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 563 PTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE- 621
P SWIEVK + + F+ D+S+ QT+ IY+KV +++ +I + GY+ E + L DV+EEE
Sbjct: 856 PGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEK 915
Query: 622 QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASR 681
+R L YHSE L +A+GL++TP TP+++ + RVCG+CHNA+K IA V REIV+RDA+R
Sbjct: 916 ERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANR 975
Query: 682 FHHFRNGTCSCGDYW 696
FH F++G CSCGDYW
Sbjct: 976 FHRFKDGICSCGDYW 990
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 219/434 (50%), Gaps = 9/434 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ V + S+ ++V + G + L + N +++M+ + AR +F +M
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL--GLIEV 242
ERD +SW ++I+G+ +G EA F+ + T ++++A++ L GL +
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL-SL 435
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
+Q+H A+K DSFV+ ALID YS+ +++A+ +F++ V WN++++GY
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
+ L ++ M G + D FT++ V + C L ++ KQ HA ++ G+ D+
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
++G++D Y K G M A+ FD + + ++W +I+G +G+ E+A +F QM V
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
+P+ T + A S E+G +I ++ + ++++ + G +D+A+
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 483 ALIRSAPVEPTKNMWVALLTACRMH--GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
L + + W A+L H G L F K G++P K+ +++ +L+ S
Sbjct: 674 CLFKRIEMMNI-TAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKV-TFIGVLSACSH 731
Query: 541 SGKLMEAAGVLKTL 554
SG + EA ++++
Sbjct: 732 SGLVSEAYKHMRSM 745
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 30/370 (8%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
+ + LF ++ +G+ +D T + C L +I K+V Y I +G++ DL++ +
Sbjct: 500 KTLKLFALMHKQGERSD--DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW------E 217
+L M+V+CG M A+ F +P D V+W T+ISG +++G AF F M +
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
EF T AT+ +AS+ L +E GRQIH+ ALK D FV +L+DMY+KCGSI+D
Sbjct: 618 EF------TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
A C+F ++ + WN+++ G A G +E L ++ +M+ G K D+ T V+ C+
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 338 LA----SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVI 392
+ +H + H +G +I + L D + G ++ A ++ + M + +
Sbjct: 732 SGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASAS 788
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE---IF 449
+ L+A G E + ++L + + VL + Y+ S+ W+ +
Sbjct: 789 MYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY---VLLSNMYAAASK--WDEMKLA 843
Query: 450 YSMSRDHKVK 459
+M + HKVK
Sbjct: 844 RTMMKGHKVK 853
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 30/368 (8%)
Query: 179 KLFADMPERDAVSWMTL----ISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRAS 234
K FA+ + +VS + +S + SG Y+ + F M E + TF M+ +
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
+ + +G+Q+H ALK G+ V+ +LI+MY K A+ VFD M E+ + WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS-LEHAKQAHAALVR 353
S+I+G A G EA+ +++++ G K DQ+T++ V++ + L L +KQ H ++
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEM 413
SD +T L+D YS+ M++A +F+R ++++WNA++AGY G + +++
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
F M ++ + T V C + +++++ +V A+ ++L
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGF----------LFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 474 REGLLD----------EAFALIRSAPVEPTKNMWVALLTACRMHG--NLVLGKFAAEKLY 521
G+LD FA S PV P W +++ C +G F+ +L
Sbjct: 555 SSGILDMYVKCGDMSAAQFAF-DSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 522 GMEPGKLS 529
G+ P + +
Sbjct: 613 GVLPDEFT 620
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 156 PDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG-----NYAEAFE 210
P+ +++N ++ M+ +CG + AR++F MP+RD VSW ++++ S N +AF
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFL 131
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYS 270
F + ++ T + M++ G + H A K G+ D FVA AL+++Y
Sbjct: 132 LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
K G +++ + +F++MP + V WN ++ Y G+ EEA+ + SG ++ T+ +
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRL 251
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
+ RI G D ++ G V ++ DA V + + R
Sbjct: 252 LARIS---------------------GDD--SDAGQVKSFANGN---DASSVSEIIFR-- 283
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
N ++ Y + GQ ++ F M+ V + VTF+ +L+
Sbjct: 284 ----NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+G+ H+ L + F+ LI MYSKCGS+ A+ VFD+MP++ V WNSI++ YA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 302 LRGYS-----EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
++A ++ +R + T+S ++++C + ++ H + G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
D LV+ Y K+G++++ + +F+ M ++V+ WN ++ Y G E+AI++
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 417 MLRERVIPNHVTF 429
+ PN +T
Sbjct: 237 FHSSGLNPNEITL 249
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG-----EQAIEMFEQML 418
L+ YSK G + AR VFD+M ++++SWN+++A Y + +QA +F +
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILR 137
Query: 419 RERVIPNHVTFLAVLSACSYSG 440
++ V + +T +L C +SG
Sbjct: 138 QDVVYTSRMTLSPMLKLCLHSG 159
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 349/630 (55%), Gaps = 30/630 (4%)
Query: 97 ALCNRYKEAMDLFE----ILEL--EGDGADV--------------GGSTYDALVNVCVGL 136
L NRY + D+F I +L GD A+ S++ + C L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
I K+ G++ D+++ + ++ M+ CG + DARK+F ++P+R+ VSW ++I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSRTF------ATMVRASAGLGLIEVGRQIHSCA 250
G +GN +A F + + ND F +++ A + + + IHS
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 251 LKRGVGEDSFVACALIDMYSKCGS--IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
+KRG V L+D Y+K G + A+ +FDQ+ +K V +NSI+S YA G S E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 309 ALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLV 367
A ++ + ++ + T+S V+ + +L K H ++R G D++ T ++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 368 DFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHV 427
D Y K GR+E AR FDRM KNV SW A+IAGYG HG +A+E+F M+ V PN++
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 428 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
TF++VL+ACS++GL GW F +M V+P HY CM++LLGR G L +A+ LI+
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 488 APVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEA 547
++P +W +LL ACR+H N+ L + + +L+ ++ Y++L ++Y+ +G+ +
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 548 AGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYI 607
V +K +GL P S +E+ + + FL GD+ H Q ++IY+ + L ++ GY+
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 608 EEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLI 666
+ DVDEEE+ + L+ HSE L IA+G++NT + + + + RVC +CHN IKLI
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 667 AMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+ + RE VVRDA RFHHF++G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 335/574 (58%), Gaps = 2/574 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +++ C LR + K ++ YM+ GF + + N ++ ++ +CG M+ AR +F M
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
+D VSW ++ISG + SG+ EA + F M T+ ++ S L ++ G+
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+HS +K G+ D V+ ALIDMY+KCG + D+ +F M TV WN++IS G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
L + +MR S D T + + +CA LA+ K+ H L+R G+ S++
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L++ YSK G +E++ VF+RM R++V++W +I YG +G+GE+A+E F M + ++P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+ V F+A++ ACS+SGL + G F M +K+ P HYAC+++LL R + +A
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
I++ P++P ++W ++L ACR G++ + + ++ + P ++ N Y++ K
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 545 MEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH 604
+ + + K+LK K +T P SWIEV K + F GD S Q++ IY+ ++ L +++
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 605 GYIEEHEMLLPDV--DEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNA 662
GYI + + ++ +EE++R++ HSE L IA+GL+NT TPLQ+ + RVCG+CH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 663 IKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
KLI+ + GREI+VRDA+RFH F++GTCSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 173/313 (55%), Gaps = 1/313 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ +++ C GL V+ ++ GFE DL++ N ++ M+ R GL+ AR++F +M
Sbjct: 108 TFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM 167
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RD VSW +LISG G Y EA E + + + S T ++++ A L +++ G+
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+H ALK GV V L+ MY K DA+ VFD+M + +V +N++I GY
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
EE++ ++LE D K D T+S V+R C L L AK + +++ GF +
Sbjct: 288 MVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+D Y+K G M AR VF+ M K+ +SWN++I+GY G +A+++F+ M+
Sbjct: 347 ILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 425 NHVTFLAVLSACS 437
+H+T+L ++S +
Sbjct: 407 DHITYLMLISVST 419
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 198/414 (47%), Gaps = 38/414 (9%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM-PERDAVSWMTLISGLV 200
++R+ +IS G + + +++ + + +F + P ++ W ++I
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+G + EA E + + E TF ++++A AGL E+G ++ L G D F
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
V AL+DMYS+ G + A+ VFD+MP + V WNS+ISGY+ GY EEAL IY E+++S
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
D FT+S V+ L ++ + H ++ G S +V N GLV Y K+ R DAR
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG 440
VFD M ++ +S+N +I GY E+++ MF + L ++ P+ +T +VL AC +
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH-- 319
Query: 441 LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
RD + +Y +L F L + +N+ + +
Sbjct: 320 ------------LRDLSLAKYIYNY-----------MLKAGFVLEST-----VRNILIDV 351
Query: 501 LTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
C G+++ + + ME S+ +++ Y SG LMEA + K +
Sbjct: 352 YAKC---GDMITAR---DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML-RK 389
+ R + ++L ++ HA ++ G S + L+D YS + + VF R+ K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
NV WN++I + +G +A+E + ++ +V P+ TF +V+ AC+ +E G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG-DLV 128
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
Y D + ++++ R GLL A + PV + W +L++ HG
Sbjct: 129 YEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHG 186
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+T+ + +C L + R K + ++ G+E +L + N ++ M+ +CG + ++ ++F
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
M RD V+W +I G +A E F M + S F ++ A + GL++ G
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Query: 244 RQIHSCALKRGVGEDSFV---ACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-WNSIISG 299
+K D + AC ++D+ S+ I A+ MP K W S++
Sbjct: 630 LACFE-KMKTHYKIDPMIEHYAC-VVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRA 687
Query: 300 YALRGYSEEA 309
G E A
Sbjct: 688 CRTSGDMETA 697
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/606 (33%), Positives = 337/606 (55%), Gaps = 34/606 (5%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ L+ + S+ + + G + + D+++ N ++H + CG + A K+F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
E+D VSW ++I+G V G+ +A E F M E T ++ A A + +E GR
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD--------------------- 283
Q+ S + V + +A A++DMY+KCGSIEDA+ +FD
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 284 ----------QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR-DSGAKIDQFTISIVI 332
MP+K V WN++IS Y G EAL ++ E++ K++Q T+ +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
CA++ +LE + H+ + +HG + + L+ YSK G +E +R VF+ + +++V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
W+A+I G HG G +A++MF +M V PN VTF V ACS++GL + +F+ M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVL 512
++ + P HYAC++++LGR G L++A I + P+ P+ ++W ALL AC++H NL L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 513 GKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKK 572
+ A +L +EP ++V+L N+Y+ GK + + K ++ GL P CS IE+
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 573 QPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE--QRILKYHSE 630
+ FL GD +H ++++Y K+ +M+++ +GY E +L ++EEE ++ L HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672
Query: 631 MLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTC 690
L I YGLI+T +++ + RVCG+CH+ KLI+ + REI+VRD RFHHFRNG C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 691 SCGDYW 696
SC D+W
Sbjct: 733 SCNDFW 738
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 227/472 (48%), Gaps = 49/472 (10%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGL--MLDARKLF 181
S + +L+ CV LR + K+ G+MI G D Y +++ M + ARK+F
Sbjct: 31 SRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 182 ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLI 240
++P+ ++ +W TLI + + FL M E ++ TF +++A+A + +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+G+ +H A+K VG D FVA +LI Y CG ++ A VF + EK V WNS+I+G+
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
+G ++AL ++ +M K T+ V+ CA++ +LE +Q + + + ++
Sbjct: 208 VQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNL 267
Query: 361 VANTGLVDFYSKWGRMEDARHVFD-------------------------------RMLRK 389
++D Y+K G +EDA+ +FD M +K
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQM-LRERVIPNHVTFLAVLSACSYSGLSERG-WE 447
++++WNALI+ Y +G+ +A+ +F ++ L++ + N +T ++ LSAC+ G E G W
Sbjct: 328 DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW- 386
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
+S + H ++ + +I + + G L+++ + S +W A++ MH
Sbjct: 387 -IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF-VWSAMIGGLAMH 444
Query: 508 GNLVLGKFAAEKLYGMEPGKLSSY-VMLLNMY---SSSGKLMEAAGVLKTLK 555
G G A + Y M+ + V N++ S +G + EA + ++
Sbjct: 445 G---CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 40/339 (11%)
Query: 104 EAMDLFEILELEGDGADVGGS--TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
+A++LF+ +E E DV S T +++ C +R++ ++V Y+ N +L +
Sbjct: 215 KALELFKKMESE----DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM------ 215
N +L M+ +CG + DA++LF M E+D V+W T++ G S +Y A E M
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 216 -WEEF-----NDGRSR--------------------TFATMVRASAGLGLIEVGRQIHSC 249
W +G+ T + + A A +G +E+GR IHS
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
K G+ + V ALI MYSKCG +E ++ VF+ + ++ W+++I G A+ G EA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQA-HAALVRHGFGSDIVANTGLVD 368
+ ++ +M+++ K + T + V C+ ++ A+ H +G + +VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 369 FYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQ 406
+ G +E A + M + + W AL+ H
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 16/252 (6%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
EA+ +F L+L+ + + T + ++ C + ++ + + Y+ +G + ++ +
Sbjct: 346 NEALIVFHELQLQKN-MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++HM+ +CG + +R++F + +RD W +I GL G EA + F M E
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 223 RSRTFATMVRASAGLGLIEVGRQI-HSCALKRG-VGEDSFVACALIDMYSKCGSIEDAQC 280
TF + A + GL++ + H G V E+ AC ++D+ + G +E A
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC-IVDVLGRSGYLEKAVK 523
Query: 281 VFDQMP-EKSTVGWNSIISG---YALRGYSEEALSIYLEM--RDSGAKIDQFTISIVIRI 334
+ MP ST W +++ +A +E A + LE+ R+ GA + ++ I
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV------LLSNI 577
Query: 335 CARLASLEHAKQ 346
A+L E+ +
Sbjct: 578 YAKLGKWENVSE 589
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/573 (34%), Positives = 319/573 (55%), Gaps = 1/573 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY +++ C+ L + +++ +I F+ + Y+ + ++ M+ + G + A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
+D VSW T+I+G +A F M + V A AGL ++ G+
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
QIH+ A G D AL+ +YS+CG IE++ F+Q + WN+++SG+ G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+EEAL +++ M G + FT ++ + A+++ KQ HA + + G+ S+
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+ Y+K G + DA F + KN +SWNA+I Y HG G +A++ F+QM+ V P
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
NHVT + VLSACS+ GL ++G F SM+ ++ + P+ HY C++++L R GLL A
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
I+ P++P +W LL+AC +H N+ +G+FAA L +EP ++YV+L N+Y+ S K
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 545 MEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH 604
+ +K KG+ P SWIEVK ++F GD++H EI++ +L S
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 605 GYIEEHEMLLPDVDEEEQR-ILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAI 663
GY+++ LL ++ E++ I+ HSE L I++GL++ P P+ + + RVC +CH I
Sbjct: 972 GYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWI 1031
Query: 664 KLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
K ++ V+ REI+VRDA RFHHF G CSC DYW
Sbjct: 1032 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 194/385 (50%), Gaps = 4/385 (1%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
+ ++++ C + S+ +++ G ++ GF D Y+ N ++ ++ G ++ A +F++M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQ 245
+RDAV++ TLI+GL G +A E F M + + S T A++V A + G + G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGY 305
+H+ K G ++ + AL+++Y+KC IE A F + ++ V WN ++ Y L
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 306 SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG 365
+ I+ +M+ +Q+T +++ C RL LE +Q H+ +++ F + +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 366 LVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
L+D Y+K G+++ A + R K+V+SW +IAGY + ++A+ F QML + +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 426 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
V +SAC+ + G +I A ++ L R G ++E++
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA-LVTLYSRCGKIEESYLAF 649
Query: 486 RSAPVEPTKNM-WVALLTACRMHGN 509
E N+ W AL++ + GN
Sbjct: 650 EQ--TEAGDNIAWNALVSGFQQSGN 672
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 195/400 (48%), Gaps = 9/400 (2%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLR-SIRGVKRVFGYMIS 151
I++LA N E LF + E + G T+ ++ C G + V+++ ++
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEG--TFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
G + N ++ ++ R G + AR++F + +D SW+ +ISGL + AEA
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
F M+ F++++ A + +E+G Q+H LK G D++V AL+ +Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
G++ A+ +F M ++ V +N++I+G + GY E+A+ ++ M G + D T++ +
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
+ C+ +L +Q HA + GF S+ L++ Y+K +E A F +NV
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
+ WN ++ YG + +F QM E ++PN T+ ++L C G E G +I
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIH-- 513
Query: 452 MSRDHKVKPRAMHYAC--MIELLGREGLLDEAF-ALIRSA 488
S+ K + Y C +I++ + G LD A+ LIR A
Sbjct: 514 -SQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 37/445 (8%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+++ ++ G + + + ++ ++ G + A K+F +MPER +W +I L
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL-IEVGRQIHSCALKRGVGEDSFV 261
E F F+ M E TF+ ++ A G + +V QIH+ L +G+ + + V
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVV 224
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
LID+YS+ G ++ A+ VFD + K W ++ISG + EA+ ++ +M G
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGI 284
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
+ S V+ C ++ SLE +Q H +++ GF SD LV Y G + A H
Sbjct: 285 MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
+F M +++ +++N LI G G GE+A+E+F++M + + P+ T +++ ACS G
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 442 SERGWEIFYSMSR-----DHKVK-------------PRAMHYACMIE---------LLGR 474
RG ++ ++ ++K++ A+ Y E +L
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 475 EGLLDE---AFALIRSAPVE---PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL 528
GLLD+ +F + R +E P + + ++L C G+L LG+ ++ +L
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN-FQL 523
Query: 529 SSYV--MLLNMYSSSGKLMEAAGVL 551
++YV +L++MY+ GKL A +L
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 136/317 (42%), Gaps = 46/317 (14%)
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
G ++ GR++HS LK G+ + ++ L D Y G + A VFD+MPE++ WN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC-ARLASLEHAKQAHAALVRHGF 356
A R E +++ M ++ T S V+ C + + +Q HA ++ G
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
V L+D YS+ G ++ AR VFD + K+ SW A+I+G + +AI +F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERGWE----------------------------- 447
M ++P F +VLSAC E G +
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 448 ------IFYSMS-RDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA---PVEPTKNMW 497
IF +MS RD A+ Y +I L + G ++A L + +EP N
Sbjct: 339 LISAEHIFSNMSQRD------AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTL 392
Query: 498 VALLTACRMHGNLVLGK 514
+L+ AC G L G+
Sbjct: 393 ASLVVACSADGTLFRGQ 409
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 12/194 (6%)
Query: 316 MRDSGAKIDQFTISIVIRICARL-ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
+ + G + + T+ ++ C + SL+ ++ H+ +++ G S+ + L DFY G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+ A VFD M + + +WN +I + + +F +M+ E V PN TF VL
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 435 AC-----SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP 489
AC ++ + + I Y RD V +I+L R G +D A +
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNP-----LIDLYSRNGFVDLARRVFDGLR 249
Query: 490 VEPTKNMWVALLTA 503
++ + WVA+++
Sbjct: 250 LKDHSS-WVAMISG 262
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 4/199 (2%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+EA+ +F + + +G D T+ + V +++ K+V + G++ + + N
Sbjct: 674 EEALRVF--VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+ +CG + DA K F ++ ++ VSW +I+ G +EA + F M
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 223 RSRTFATMVRASAGLGLIEVG-RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
T ++ A + +GL++ G S + G+ ++DM ++ G + A+
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 282 FDQMPEK-STVGWNSIISG 299
+MP K + W +++S
Sbjct: 852 IQEMPIKPDALVWRTLLSA 870
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/654 (34%), Positives = 355/654 (54%), Gaps = 49/654 (7%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S IE A + K A+++F + E G T ++ C L + K++ + +
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEF-GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV 256
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
++ ++++ N ++ M+ +CG+M +A +F++M +D VSW +++G G + +A
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 211 QFLCMWEE--------------------------------FNDG---RSRTFATMVRASA 235
F M EE + G T +++ A
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 236 GLGLIEVGRQIHSCALK-------RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP-- 286
+G + G++IH A+K G G+++ V LIDMY+KC ++ A+ +FD +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 287 EKSTVGWNSIISGYALRGYSEEALSIYLEM--RDSGAKIDQFTISIVIRICARLASLEHA 344
E+ V W +I GY+ G + +AL + EM D + + FTIS + CA LA+L
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 345 KQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
KQ HA +R+ + + + L+D Y+K G + DAR VFD M+ KN ++W +L+ GYG
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
HG GE+A+ +F++M R + VT L VL ACS+SG+ ++G E F M V P
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 464 HYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM 523
HYAC+++LLGR G L+ A LI P+EP +WVA L+ CR+HG + LG++AAEK+ +
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 524 EPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKS 583
SY +L N+Y+++G+ + + ++ KG+ P CSW+E K F GDK+
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKT 736
Query: 584 HTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRILKY-HSEMLGIAYGLINTP 642
H KEIYQ + + M I GY+ E L DVD+EE+ L + HSE L +AYG++ TP
Sbjct: 737 HPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTP 796
Query: 643 DWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
++IT+ RVCG+CH A ++ + +I++RD+SRFHHF+NG+CSC YW
Sbjct: 797 QGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 211/466 (45%), Gaps = 53/466 (11%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ + C + S+R + + GF ++++ N ++ M+ RC + DARK+F +M
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVG 243
D VSW ++I G A E F M EF + T ++ A LG +G
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI------- 296
+Q+H A+ + ++ FV L+DMY+KCG +++A VF M K V WN++
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 297 ----------------------------ISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
ISGYA RG EAL + +M SG K ++ T+
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 329 SIVIRICARLASLEHAKQAHAALVRH-------GFGSDIVANTGLVDFYSKWGRMEDARH 381
V+ CA + +L H K+ H +++ G G + + L+D Y+K +++ AR
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 382 VFDRMLRK--NVISWNALIAGYGNHGQGEQAIEMFEQMLRE--RVIPNHVTFLAVLSACS 437
+FD + K +V++W +I GY HG +A+E+ +M E + PN T L AC+
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMW 497
G +I R+ + C+I++ + G + +A L+ + + W
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNEVTW 547
Query: 498 VALLTACRMH--GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+L+T MH G LG F + G KL +L+ +Y+ S
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGF---KLDGVTLLVVLYACS 590
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 16/304 (5%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMP--EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
LI Y G + A + + P + WNS+I Y G + + L ++ M
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
D +T V + C ++S+ + AHA + GF S++ LV YS+ + DAR V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSACSYSGL 441
FD M +V+SWN++I Y G+ + A+EMF +M E P+++T + VL C+ G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALL 501
G ++ + + ++ C++++ + G++DEA + + V+ + W A++
Sbjct: 245 HSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS-WNAMV 302
Query: 502 TACRMHGNLVLGKF--AAEKLYGMEPGKLS----SYVMLLNMYSSSGKLMEAAGVLKTLK 555
G +G+F A M+ K+ ++ ++ Y+ G EA GV + +
Sbjct: 303 A-----GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 556 RKGL 559
G+
Sbjct: 358 SSGI 361
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 331/609 (54%), Gaps = 5/609 (0%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I LA + A L E E+ +G T+ LR K++ +
Sbjct: 78 SLISGLAQNGHFSTA--LVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
G D+++ M+ + L DARKLF ++PER+ +W IS V G EA E
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYS 270
F+ S TF + A + + +G Q+H L+ G D V LID Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
KC I ++ +F +M K+ V W S+++ Y E+A +YL R + F IS
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
V+ CA +A LE + HA V+ I + LVD Y K G +ED+ FD M KN
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERV--IPNHVTFLAVLSACSYSGLSERGWEI 448
+++ N+LI GY + GQ + A+ +FE+M PN++TF+++LSACS +G E G +I
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F SM + ++P A HY+C++++LGR G+++ A+ I+ P++PT ++W AL ACRMHG
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
LG AAE L+ ++P ++V+L N ++++G+ EA V + LK G+ SWI
Sbjct: 496 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRI-LKY 627
VK Q +AF D+SH KEI + L +E+ GY + ++ L D++EEE+ + +
Sbjct: 556 TVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Query: 628 HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRN 687
HSE L +A+GL++ P P++IT+ R+CG+CH+ K ++ REI+VRD +RFH F++
Sbjct: 616 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 675
Query: 688 GTCSCGDYW 696
G CSC DYW
Sbjct: 676 GICSCKDYW 684
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 203/438 (46%), Gaps = 41/438 (9%)
Query: 156 PDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM 215
P ++ N +++M+ + AR + P R+ VSW +LISGL +G+++ A +F M
Sbjct: 40 PPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
E TF +A A L L G+QIH+ A+K G D FV C+ DMY K
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 276 EDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
+DA+ +FD++PE++ WN+ IS G EA+ ++E R + T + C
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+ L Q H ++R GF +D+ GL+DFY K ++ + +F M KN +SW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
+L+A Y + + E+A ++ + ++ V + +VLSAC+ E G I ++ +
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSI-HAHAVK 338
Query: 456 HKVKPRAMHYACMIELLGR-------------------------------EGLLDEAFAL 484
V+ + ++++ G+ +G +D A AL
Sbjct: 339 ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALAL 398
Query: 485 IRS-AP--VEPTKN--MWVALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSYVMLLN 536
AP PT N +V+LL+AC G + G + + YG+EPG Y +++
Sbjct: 399 FEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA-EHYSCIVD 457
Query: 537 MYSSSGKLMEAAGVLKTL 554
M +G + A +K +
Sbjct: 458 MLGRAGMVERAYEFIKKM 475
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/574 (35%), Positives = 332/574 (57%), Gaps = 8/574 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
++ A+VN C + +R+F M D N ++H +++ G + DA KLF M
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPVK----DTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P ++ +SW T+I GL + EA + F M SR F ++ A A +G
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q+H +K G + +V+ +LI Y+ C I D++ VFD+ + W +++SGY+L
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
E+ALSI+ M + +Q T + + C+ L +L+ K+ H V+ G +D
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
LV YS G + DA VF ++ +K+++SWN++I G HG+G+ A +F QM+R P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRD-HKVKPRAMHYACMIELLGREGLLDEAFA 483
+ +TF +LSACS+ G E+G ++FY MS + + + HY CM+++LGR G L EA
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
LI V+P + +W+ALL+ACRMH ++ G+ AA ++ ++ ++YV+L N+Y+S+G+
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGR 545
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISR 603
+ + +K+ G+ P SW+ ++ + + F GD+ H IY+K++ L +++
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREKLKE 603
Query: 604 HGYIEEHEMLLPDV-DEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNA 662
GY ++ L DV DE+++ +L YHSE L IA+GLINT + + + + + RVC +CH
Sbjct: 604 LGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTV 663
Query: 663 IKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
IKLI+ V GREIV+RD RFHHF+NGTCSCGDYW
Sbjct: 664 IKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 182/381 (47%), Gaps = 19/381 (4%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
R I + VF + S P + + +++ + R ++DA LF +MP RD VSW ++I
Sbjct: 49 RRIDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMI 104
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG-RQIHSCALKRGV 255
SG V+ G+ A + F +E + ++ MV G ++ R + +K
Sbjct: 105 SGCVECGDMNTAVKLF----DEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK--- 157
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
D+ +++ Y + G ++DA +F QMP K+ + W ++I G S EAL ++
Sbjct: 158 --DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKN 215
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M K + VI CA + Q H +++ GF + + L+ FY+ R
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ D+R VFD + + V W AL++GY + + E A+ +F MLR ++PN TF + L++
Sbjct: 276 IGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNS 335
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKN 495
CS G + G E+ + ++ ++ A ++ + G +++A ++ + +
Sbjct: 336 CSALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIV 393
Query: 496 MWVALLTACRMHGNLVLGKFA 516
W +++ C HG GK+A
Sbjct: 394 SWNSIIVGCAQHGR---GKWA 411
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
ST+ + +N C L ++ K + G + G E D ++ N ++ M+ G + DA +F
Sbjct: 327 STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ ++ VSW ++I G G AF F M + TF ++ A + G +E G
Sbjct: 387 IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKG 446
Query: 244 RQIH---SCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISG 299
R++ S + + C ++D+ +CG +++A+ + ++M K + + W +++S
Sbjct: 447 RKLFYYMSSGINHIDRKIQHYTC-MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
Query: 300 YAL-----RGYSEEALSIYLEMRDSGAKI 323
+ RG A L+ + S A +
Sbjct: 506 CRMHSDVDRGEKAAAAIFNLDSKSSAAYV 534
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/459 (40%), Positives = 291/459 (63%), Gaps = 2/459 (0%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
+ +G IHS ++ G G +V +L+ +Y+ CG + A VFD+MPEK V WNS+I+G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
+A G EEAL++Y EM G K D FTI ++ CA++ +L K+ H +++ G +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM-L 418
+ ++ L+D Y++ GR+E+A+ +FD M+ KN +SW +LI G +G G++AIE+F+ M
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
E ++P +TF+ +L ACS+ G+ + G+E F M ++K++PR H+ CM++LL R G +
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
+A+ I+S P++P +W LL AC +HG+ L +FA ++ +EP YV+L NMY
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 303
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLM 598
+S + + + K + R G+ +P S +EV + + FL GDKSH Q+ IY K+ +
Sbjct: 304 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 363
Query: 599 DEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCG 657
+ GY+ + + DV+EEE + + YHSE + IA+ LI+TP+ +P+ + + RVC
Sbjct: 364 GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 423
Query: 658 NCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+CH AIKL++ V REIVVRD SRFHHF+NG+CSC DYW
Sbjct: 424 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 159/313 (50%), Gaps = 27/313 (8%)
Query: 136 LRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTL 195
+ +R + + +I +GF +Y+ N +LH++ CG + A K+F MPE+D V+W ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 196 ISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
I+G ++G EA + M + T +++ A A +G + +G+++H +K G+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
+ + L+D+Y++CG +E+A+ +FD+M +K++V W S+I G A+ G+ +EA+ ++
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 316 MRDSGAKID-QFTISIVIRICARLASLEHAKQAHAALVRHGFG-----------SDIVAN 363
M + + + T ++ C +H +V+ GF + +
Sbjct: 181 MESTEGLLPCEITFVGILYAC-----------SHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 364 TG-LVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
G +VD ++ G+++ A M ++ NV+ W L+ HG + A F ++ +
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQ 287
Query: 422 VIPNHVTFLAVLS 434
+ PNH +LS
Sbjct: 288 LEPNHSGDYVLLS 300
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 7/188 (3%)
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+A + + H+ ++R GFGS I L+ Y+ G + A VFD+M K++++WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I G+ +G+ E+A+ ++ +M + + P+ T +++LSAC+ G G + M +
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 458 VKPRAMHYA-CMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
R +H + +++L R G ++EA L V+ W +L+ ++G GK A
Sbjct: 121 T--RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEA 174
Query: 517 AEKLYGME 524
E ME
Sbjct: 175 IELFKYME 182
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I A + +EA+ L+ E+ G G T +L++ C + ++ KRV YMI
Sbjct: 59 SVINGFAENGKPEEALALYT--EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
G +L+ N +L ++ RCG + +A+ LF +M ++++VSW +LI GL +G EA E
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 211 QFLCMWEEFNDGR---SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF--VACAL 265
F M E +G TF ++ A + G+++ G + + E C +
Sbjct: 177 LFKYM--ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC-M 233
Query: 266 IDMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYALRGYSEEA 309
+D+ ++ G ++ A MP + + V W +++ + G S+ A
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/629 (36%), Positives = 348/629 (55%), Gaps = 20/629 (3%)
Query: 81 VMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIR 140
+ +P T + I A AM LF+ + G +V G T L+ C +
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFK--RMRKLGFEVDGFTLSGLIAACCDRVDL- 156
Query: 141 GVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE-RDAVSWMTLISGL 199
+K++ + +S GF+ + N + + + GL+ +A +F M E RD VSW ++I
Sbjct: 157 -IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMI--- 212
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRS---RTFATMVRASAGLGLIEVGRQIHSCALKRGVG 256
V G + E + E G T A+++ A L + GRQ H +K G
Sbjct: 213 VAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFH 272
Query: 257 EDSFVACALIDMYSKCGSIE---DAQCVFDQMPEKSTVGWNSIISGYALRG-YSEEALSI 312
++S V LID YSKCG + D++ VF ++ V WN++ISGY++ SEEA+
Sbjct: 273 QNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKS 332
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD-IVANTGLVDFYS 371
+ +M+ G + D + V C+ L+S KQ H ++ S+ I N L+ Y
Sbjct: 333 FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
K G ++DAR VFDRM N +S+N +I GY HG G +A+ ++++ML + PN +TF+A
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
VLSAC++ G + G E F +M K++P A HY+CMI+LLGR G L+EA I + P +
Sbjct: 453 VLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
P W ALL ACR H N+ L + AA +L M+P + YVML NMY+ + K E A V
Sbjct: 513 PGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVR 572
Query: 552 KTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHE 611
K+++ K + P CSWIEVKK+ + F+ D SH +E+ + ++ +M ++ + GY+ + +
Sbjct: 573 KSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKK 632
Query: 612 MLLPDVDEEEQRI----LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIA 667
+ DE + L +HSE L +A+GL++T D L + + R+CG+CHNAIK ++
Sbjct: 633 WAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMS 692
Query: 668 MVTGREIVVRDASRFHHFRNGTCSCGDYW 696
V GREI+VRD RFH F++G CSCGDYW
Sbjct: 693 AVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 210/450 (46%), Gaps = 55/450 (12%)
Query: 155 EPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLC 214
EP+++ N ++ + + + AR+LF ++P+ D VS+ TLISG YA+A E F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISG------YADARETFAA 124
Query: 215 MWEEFNDGRSRTFATMVRASAGL-----GLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
M F R F +GL +++ +Q+H ++ G S V A + Y
Sbjct: 125 M-VLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 270 SKCGSIEDAQCVFDQMPE-KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
SK G + +A VF M E + V WNS+I Y +AL++Y EM G KID FT+
Sbjct: 184 SKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG---RMEDARHVFDR 385
+ V+ L L +Q H L++ GF + +GL+DFYSK G M D+ VF
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 386 MLRKNVISWNALIAGYG-NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS------- 437
+L +++ WN +I+GY N E+A++ F QM R P+ +F+ V SACS
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQ 363
Query: 438 ---YSGLSERGW-------------EIFYSMSR--------DHKVKPRAMHYACMIELLG 473
GL+ + ++Y D + A+ + CMI+
Sbjct: 364 CKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYA 423
Query: 474 REGLLDEAFALIR---SAPVEPTKNMWVALLTACRMHGNLVLGK---FAAEKLYGMEPGK 527
+ G EA L + + + P K +VA+L+AC G + G+ ++ + +EP +
Sbjct: 424 QHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP-E 482
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
Y ++++ +GKL EA + + K
Sbjct: 483 AEHYSCMIDLLGRAGKLEEAERFIDAMPYK 512
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/748 (32%), Positives = 390/748 (52%), Gaps = 100/748 (13%)
Query: 33 YCFASKVRYWRYPFSQIR-----CSSSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTS 87
YC +S++ Y R F +I ++M G G + V E A V T
Sbjct: 59 YCKSSELNYARQLFDEISEPDKIARTTMVSGYCAS----GDITLARGVFEKAPVCMRDTV 114
Query: 88 GLCSQIEKLALCNRYKEAMDLFEILELEGDGAD--VGGSTYDALVNV------CVGLRSI 139
+ I + N A++LF ++ EG D S L V CV +
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 140 RGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG----LMLDARKLFADMPERDAVSWMTL 195
+K GY+ S + N ++ ++ +C L+ ARK+F ++ E+D SW T+
Sbjct: 175 -ALKSGAGYITS--------VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTM 225
Query: 196 --------------------------------ISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
ISG V+ G Y EA E M +
Sbjct: 226 MTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELD 285
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED-SF-VACALIDMYSKCGSIEDAQCV 281
T+ +++RA A GL+++G+Q+H+ L+R ED SF +L+ +Y KCG ++A+ +
Sbjct: 286 EFTYPSVIRACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 282 FDQMPEKSTVGWNSIISGY-------------------------------ALRGYSEEAL 310
F++MP K V WN+++SGY A G+ EE L
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
++ M+ G + + S I+ CA L + + +Q HA L++ GF S + A L+ Y
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+K G +E+AR VF M + +SWNALIA G HG G +A++++E+ML++ + P+ +T L
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
VL+ACS++GL ++G + F SM +++ P A HYA +I+LL R G +A ++I S P
Sbjct: 523 TVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPF 582
Query: 491 EPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
+PT +W ALL+ CR+HGN+ LG AA+KL+G+ P +Y++L NM++++G+ E A V
Sbjct: 583 KPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARV 642
Query: 551 LKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEH 610
K ++ +G+ CSWIE++ Q + FL D SH + + +Y + +L E+ R GY+ +
Sbjct: 643 RKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDT 702
Query: 611 EMLLPDV--DEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAM 668
+L DV D ++ +L HSE + +A+GL+ P T ++I + R CG+CHN + ++
Sbjct: 703 SFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSW 762
Query: 669 VTGREIVVRDASRFHHFRNGTCSCGDYW 696
V R+I++RD RFHHFRNG CSCG++W
Sbjct: 763 VVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 160/625 (25%), Positives = 271/625 (43%), Gaps = 166/625 (26%)
Query: 126 YDALVNVCVGLR--SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
Y A + +C+ LR S++ + V G +I+ GF+P +++NR++ ++ + + AR+LF +
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 184 MPERDAVSWMTLISGLVDSGNYAEA---FEQF-LCM------------WEEFNDGRSR-- 225
+ E D ++ T++SG SG+ A FE+ +CM + NDG S
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 226 ---------------TFATMVRASAGLGLIEVGR----QIHSCALKRGVGEDSFVACALI 266
TFA+++ AGL L+ Q H+ ALK G G + V+ AL+
Sbjct: 135 LFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 267 DMYSKCGS----IEDAQCVFDQMPEKSTVGW----------------------------- 293
+YSKC S + A+ VFD++ EK W
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 294 ---NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAA 350
N++ISGY RG+ +EAL + M SG ++D+FT VIR CA L+ KQ HA
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 351 LVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQA 410
++R S N+ LV Y K G+ ++AR +F++M K+++SWNAL++GY + G +A
Sbjct: 312 VLRREDFSFHFDNS-LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEA 370
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD----------HKVKP 460
+F++M + ++ +++ ++S + +G E G ++F M R+ +K
Sbjct: 371 KLIFKEMKEKNIL----SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 461 RAMHYA------------------------CMIELLGREGLLDEAFALIRSAP------- 489
A+ A +I + + G+++EA + R+ P
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 490 ---------------------------VEPTKNMWVALLTACRMHGNLVLGKF---AAEK 519
+ P + + +LTAC G + G+ + E
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 520 LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLC 579
+Y + PG Y L+++ SGK +A V+++L K PT E A L
Sbjct: 547 VYRIPPGA-DHYARLIDLLCRSGKFSDAESVIESLPFK-----PTAEIWE------ALLS 594
Query: 580 GDKSHTQTKEIYQKVDNLMDEISRH 604
G + H + D L I H
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEH 619
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/581 (35%), Positives = 341/581 (58%), Gaps = 11/581 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY+ L+ C S+ RV +++ NG + D ++ +++ M+ G + ARK+F
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG----LGLI 240
+R W L L +G+ E + M + T+ +++A + +
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
G++IH+ +RG ++ L+DMY++ G ++ A VF MP ++ V W+++I+ Y
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 301 ALRGYSEEALSIYLEM----RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
A G + EAL + EM +DS + T+ V++ CA LA+LE K H ++R G
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSP--NSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
S + + LV Y + G++E + VFDRM ++V+SWN+LI+ YG HG G++AI++FE+
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 476
ML P VTF++VL ACS+ GL E G +F +M RDH +KP+ HYACM++LLGR
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 477 LLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLN 536
LDEA +++ EP +W +LL +CR+HGN+ L + A+ +L+ +EP +YV+L +
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLAD 496
Query: 537 MYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
+Y+ + E V K L+ +GL LP W+EV+++ Y+F+ D+ + ++I+ +
Sbjct: 497 IYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVK 556
Query: 597 LMDEISRHGYIEEHEMLLPDVD-EEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRV 655
L +++ GYI + + +L +++ EE++RI+ HSE L +A+GLINT P++IT+ R+
Sbjct: 557 LAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRL 616
Query: 656 CGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
C +CH K I+ +EI+VRD +RFH F+NG CSCGDYW
Sbjct: 617 CEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 7/184 (3%)
Query: 325 QFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD 384
Q T ++I C +SL A + H ++ +G D T L+ YS G ++ AR VFD
Sbjct: 77 QQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFD 136
Query: 385 RMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS-- 442
+ ++ + WNAL G GE+ + ++ +M R V + T+ VL AC S +
Sbjct: 137 KTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVN 196
Query: 443 --ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
+G EI ++R ++++ R G +D A + PV + W A+
Sbjct: 197 HLMKGKEIHAHLTR-RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS-WSAM 254
Query: 501 LTAC 504
+ AC
Sbjct: 255 I-AC 257
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA+ F + E + T +++ C L ++ K + GY++ G + L +++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ M+ RCG + +++F M +RD VSW +LIS G +A + F M
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPT 385
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALK-RGVGEDSFVACALIDMYSKCGSI-EDAQCV 281
TF +++ A + GL+E G+++ + G+ ++D+ + + E A+ V
Sbjct: 386 PVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV 445
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEA 309
D E W S++ + G E A
Sbjct: 446 QDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/569 (34%), Positives = 339/569 (59%), Gaps = 1/569 (0%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
++ +C ++ K G +I E D+ ++N +++ + +CG + AR++F M ER
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
VSW T+I + +EA + FL M E T ++++ A +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
++K + + +V AL+D+Y+KCG I+DA VF+ M +KS+V W+S+++GY EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
AL +Y + + +QFT+S VI C+ LA+L KQ HA + + GFGS++ + VD
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 369 FYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
Y+K G + ++ +F + KN+ WN +I+G+ H + ++ + +FE+M ++ + PN VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA 488
F ++LS C ++GL E G F M + + P +HY+CM+++LGR GLL EA+ LI+S
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 489 PVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
P +PT ++W +LL +CR++ NL L + AAEKL+ +EP ++V+L N+Y+++ + E A
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 549 GVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIE 608
K L+ + + SWI++K + + F G+ H + +EI +DNL+ + + GY
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 609 EHEMLLPDVD-EEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIA 667
E L DV+ +++ +L HSE L + +GL+ P+ +P++I + R+C +CH +K +
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 668 MVTGREIVVRDASRFHHFRNGTCSCGDYW 696
M T R I+VRD +RFHHF +G CSCGD+W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +++ C L ++ K++ + +GF ++++ + + M+ +CG + ++ +F+++
Sbjct: 265 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 324
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
E++ W T+ISG E F M ++ TF++++ GL+E GR
Sbjct: 325 QEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Query: 245 QIHSCA-LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-WNSIISG 299
+ G+ + ++D+ + G + +A + +P T W S+++
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 345/628 (54%), Gaps = 3/628 (0%)
Query: 70 ERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDAL 129
+ K L +H P+ S I + + E +DLF L + G + G T+ +
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLF--LSIRKHGLYLHGFTFPLV 117
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
+ C S + + ++ GF D+ M +L ++ G + DA KLF ++P+R
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
V+W L SG SG + EA + F M E S ++ A +G ++ G I
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
+ + ++SFV L+++Y+KCG +E A+ VFD M EK V W+++I GYA + +E
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG 297
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
+ ++L+M K DQF+I + CA L +L+ + + + RH F +++ L+D
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM 357
Query: 370 YSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
Y+K G M VF M K+++ NA I+G +G + + +F Q + + P+ TF
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 430 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP 489
L +L C ++GL + G F ++S + +K HY CM++L GR G+LD+A+ LI P
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP 477
Query: 490 VEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAG 549
+ P +W ALL+ CR+ + L + ++L +EP +YV L N+YS G+ EAA
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAE 537
Query: 550 VLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEE 609
V + +KG+ +P SWIE++ + + FL DKSH + +IY K+++L +E+ G++
Sbjct: 538 VRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPT 597
Query: 610 HEMLLPDVDEEE-QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAM 668
E + DV+EEE +R+L YHSE L +A GLI+T +++ + RVCG+CH +KLI+
Sbjct: 598 TEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISK 657
Query: 669 VTGREIVVRDASRFHHFRNGTCSCGDYW 696
+T REIVVRD +RFH F NG+CSC DYW
Sbjct: 658 ITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 334/573 (58%), Gaps = 9/573 (1%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGL---MLDARKLFADMP 185
L++ C LR + ++ Y I + E D+ + ++++ M AR LF M
Sbjct: 35 LISKCNSLRELMQIQ---AYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQ 245
E D V + ++ G N E F F+ + E+ + TF ++++A A +E GRQ
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGY 305
+H ++K G+ ++ +V LI+MY++C ++ A+CVFD++ E V +N++I+GYA R
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 306 SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG 365
EALS++ EM+ K ++ T+ V+ CA L SL+ K H +H F + NT
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 366 LVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
L+D ++K G ++DA +F++M K+ +W+A+I Y NHG+ E+++ MFE+M E V P+
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 426 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
+TFL +L+ACS++G E G + F M + P HY M++LL R G L++A+ I
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
P+ PT +W LL AC H NL L + +E+++ ++ YV+L N+Y+ + K
Sbjct: 391 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 450
Query: 546 EAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHG 605
+ K +K + +P CS IEV + F GD + T ++++ +D ++ E+ G
Sbjct: 451 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 510
Query: 606 YIEEHEMLL-PDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAI 663
Y+ + M++ +++++E+ I L+YHSE L I +GL+NTP T +++ + RVC +CHNA
Sbjct: 511 YVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAA 570
Query: 664 KLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
KLI+++ GR++V+RD RFHHF +G CSCGD+W
Sbjct: 571 KLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 161/322 (50%), Gaps = 3/322 (0%)
Query: 100 NRYKEAMDLFEI-LELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDL 158
+R+ +++F + +E+ DG T+ +L+ C +++ +++ + G + ++
Sbjct: 105 SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE 218
Y+ +++M+ C + AR +F + E V + +I+G EA F M +
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
+ T +++ + A LG +++G+ IH A K + V ALIDM++KCGS++DA
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+F++M K T W+++I YA G +E+++ ++ MR + D+ T ++ C+
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 339 ASLEHAKQAHAALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNA 396
+E ++ + +V + G I +VD S+ G +EDA D++ + + W
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 397 LIAGYGNHGQGEQAIEMFEQML 418
L+A +H + A ++ E++
Sbjct: 405 LLAACSSHNNLDLAEKVSERIF 426
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 331/578 (57%), Gaps = 9/578 (1%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+ Y+A+V G R ++ +++V ++I G+ ++ +++ + + LF
Sbjct: 10 AAYEAIVRA--GPR-VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLS 66
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+P D + ++I + M + TF +++++ A L + +G
Sbjct: 67 VPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIG 126
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+ +H A+ G G D++V AL+ YSKCG +E A+ VFD+MPEKS V WNS++SG+
Sbjct: 127 KGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQN 186
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G ++EA+ ++ +MR+SG + D T ++ CA+ ++ H ++ G ++
Sbjct: 187 GLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLG 246
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RV 422
T L++ YS+ G + AR VFD+M NV +W A+I+ YG HG G+QA+E+F +M +
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
IPN+VTF+AVLSAC+++GL E G ++ M++ +++ P H+ CM+++LGR G LDEA+
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 483 ALIRSAPVE---PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
I +W A+L AC+MH N LG A++L +EP +VML N+Y+
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
Query: 540 SSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMD 599
SGK E + + + R L S IEV+ + Y F GD+SH +T EIY+ ++ L+
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLIS 486
Query: 600 EISRHGYIEEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGN 658
GY E ++ V+EEE+ L+YHSE L +A+GL+ T D + I + R+C +
Sbjct: 487 RCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICED 545
Query: 659 CHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
CH+A K I++V+ R+I VRD RFHHF+NG+CSC DYW
Sbjct: 546 CHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 134/313 (42%), Gaps = 51/313 (16%)
Query: 87 SGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVF 146
+ L S E+ L + EA+ +F ++ G + +T+ +L++ C ++ V
Sbjct: 177 NSLVSGFEQNGLAD---EAIQVF--YQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH 231
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA 206
Y+IS G + ++ + +++++ RCG + AR++F M E + +W +IS G
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 207 EAFEQFLCMWEEFND-GRSRTFATMVRASAGLGLIEVGRQIHSCALK--RGVGEDSFVAC 263
+A E F M ++ + TF ++ A A GL+E GR ++ K R + C
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVC 351
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPE--KSTVG--WNSIISGYAL-RGYSEEALSIYLEMRD 318
++DM + G +++A Q+ K+T W +++ + R Y D
Sbjct: 352 -MVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNY------------D 398
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G + I RL +LE H + L + Y+ G+ ++
Sbjct: 399 LG-----------VEIAKRLIALEPDNPGHHVM--------------LSNIYALSGKTDE 433
Query: 379 ARHVFDRMLRKNV 391
H+ D M+R N+
Sbjct: 434 VSHIRDGMMRNNL 446
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 385 bits (989), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 334/609 (54%), Gaps = 40/609 (6%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
S ++L+N+ K VF M+ D+ N ++ +H++ G M A F
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVR----DISSWNAMIALHMQVGQMDLAMAQFEQ 237
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEV 242
M ERD V+W ++ISG G A + F M + R T A+++ A A L + +
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE-------------------------- 276
G+QIHS + G V ALI MYS+CG +E
Sbjct: 298 GKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGY 357
Query: 277 -------DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
A+ +F + ++ V W ++I GY G EA++++ M G + + +T++
Sbjct: 358 IKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LR 388
++ + + LASL H KQ H + V+ G + + L+ Y+K G + A FD +
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
++ +SW ++I HG E+A+E+FE ML E + P+H+T++ V SAC+++GL +G +
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F M K+ P HYACM++L GR GLL EA I P+EP W +LL+ACR+H
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
N+ LGK AAE+L +EP +Y L N+YS+ GK EAA + K++K + SWI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE-EQRILKY 627
EVK + + F D +H + EIY + + DEI + GY+ + +L D++EE +++IL++
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRH 717
Query: 628 HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRN 687
HSE L IA+GLI+TPD T L+I + RVC +CH AIK I+ + GREI+VRD +RFHHF++
Sbjct: 718 HSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKD 777
Query: 688 GTCSCGDYW 696
G CSC DYW
Sbjct: 778 GFCSCRDYW 786
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 139/519 (26%), Positives = 225/519 (43%), Gaps = 107/519 (20%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----------------------- 185
+I +G +Y+MN +++++ + G L ARKLF +MP
Sbjct: 40 VIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDST 99
Query: 186 --------ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
+RD+VSW T+I G + G Y +A M +E + T ++ + A
Sbjct: 100 CEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD-------------- 283
+E G+++HS +K G+ + V+ +L++MY+KCG A+ VFD
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 284 -----------------QMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQ 325
QM E+ V WNS+ISG+ RGY AL I+ +M RDS D+
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFG-SDIVAN--------------------- 363
FT++ V+ CA L L KQ H+ +V GF S IV N
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 364 -----------TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
T L+D Y K G M A+++F + ++V++W A+I GY HG +AI
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F M+ PN T A+LS S G +I S + ++ ++ A +I +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNA-LITMY 458
Query: 473 GREGLL---DEAFALIRSAPVEPTKNMWVALLTACRMHGNL--VLGKFAAEKLYGMEPGK 527
+ G + AF LIR E W +++ A HG+ L F + G+ P
Sbjct: 459 AKAGNITSASRAFDLIR---CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCS 566
+ +YV + + + +G + + +K ++PT S
Sbjct: 516 I-TYVGVFSACTHAGLVNQGRQYFDMMKDVD-KIIPTLS 552
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/583 (36%), Positives = 335/583 (57%), Gaps = 11/583 (1%)
Query: 120 DVGGSTYDALVNVCVGLRSIRGV--KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
D S+ A V CV + R + K V +GF D +++ ++R G + A
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGD-----QLVGCYLRLGHDVCA 85
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF--LCMWEEFNDGRSRTFATMVRASA 235
KLF +MPERD VSW +LISG G + FE + + E TF +M+ A
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 236 GLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNS 295
G E GR IH +K GV E+ V A I+ Y K G + + +F+ + K+ V WN+
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 296 IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
+I + G +E+ L+ + R G + DQ T V+R C + + A+ H ++ G
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFE 415
F + T L+D YSK GR+ED+ VF + + ++W A++A Y HG G AI+ FE
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 416 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
M+ + P+HVTF +L+ACS+SGL E G F +MS+ +++ PR HY+CM++LLGR
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 476 GLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLL 535
GLL +A+ LI+ P+EP+ +W ALL ACR++ + LG AAE+L+ +EP +YVML
Sbjct: 386 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLS 445
Query: 536 NMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVD 595
N+YS+SG +A+ + +K+KGL CS+IE + + F+ GD SH ++++I +K+
Sbjct: 446 NIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLK 505
Query: 596 NLMDEI-SRHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGIAYGLINTPDWTPLQITQGH 653
+ ++ S GY + E +L DV E+ ++ ++ HSE + +A+GL+ P+ I +
Sbjct: 506 EIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNL 565
Query: 654 RVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
R+CG+CH K I+++ R I++RD+ RFHHF +G+CSC DYW
Sbjct: 566 RICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 91/196 (46%), Gaps = 6/196 (3%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G + +T+ A++ C + +R + + G ++ GF + + +L ++ + G + D+
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
+F ++ D+++W +++ G +A + F M TF ++ A +
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 238 GLIEVGRQIHSCALKRGVGEDSF--VACALIDMYSKCGSIEDAQCVFDQMP-EKSTVGWN 294
GL+E G+ KR + +C ++D+ + G ++DA + +MP E S+ W
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSC-MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 295 SIISGYALRGYSEEAL 310
+++ A R Y + L
Sbjct: 409 ALLG--ACRVYKDTQL 422
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/632 (33%), Positives = 347/632 (54%), Gaps = 24/632 (3%)
Query: 76 LEDAHVMKPSTSGLCSQIEKLALCNRYKE------AMDLFEILELEGDGADVGGSTYDAL 129
LEDA + S L + + + + + Y E A+ LF + GD S Y L
Sbjct: 134 LEDADKLFDEMSEL-NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP--SSMYTTL 190
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
+ V R++ +++ ++I G + + +++M+V+CG ++ A+++F M +
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
V+ L+ G +G +A + F+ + E + S F+ +++A A L + +G+QIH+C
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
K G+ + V L+D Y KC S E A F ++ E + V W++IISGY EEA
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 310 LSIYLEMRDSGAKI-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
+ + +R A I + FT + + + C+ LA Q HA ++ + L+
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALIT 430
Query: 369 FYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
YSK G ++DA VF+ M ++++W A I+G+ +G +A+ +FE+M+ + PN VT
Sbjct: 431 MYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT 490
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA 488
F+AVL+ACS++GL E+G +M R + V P HY CMI++ R GLLDEA +++
Sbjct: 491 FIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
Query: 489 PVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
P EP W L+ C H NL LG+ A E+L ++P + YV+ N+Y+ +GK EAA
Sbjct: 551 PFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAA 610
Query: 549 GVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIE 608
++K + + L +CSWI+ K + + F+ GDK H QT+EIY+K+ G++
Sbjct: 611 EMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF------DGFM- 663
Query: 609 EHEMLLPDVDEEEQRILKYHSEMLGIAYGLI----NTPDWTPLQITQGHRVCGNCHNAIK 664
E +M ++ E +++L HSE L IA+GLI N P P+++ + R C +CH K
Sbjct: 664 EGDMFQCNMTERREQLLD-HSERLAIAFGLISVHGNAP--APIKVFKNLRACPDCHEFAK 720
Query: 665 LIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+++VTG EIV+RD+ RFHHF+ G CSC DYW
Sbjct: 721 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 230/472 (48%), Gaps = 9/472 (1%)
Query: 92 QIEKLALCN--RYKEAMDLFEIL-ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGY 148
Q+E L L + ++++ + FE L E++ G V +Y L C LRS+ + +
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
M P + + N VL M+ C + DA KLF +M E +AVS T+IS + G +A
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F M + S + T++++ ++ GRQIH+ ++ G+ ++ + +++M
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
Y KCG + A+ VFDQM K V ++ GY G + +AL +++++ G + D F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
S+V++ CA L L KQ HA + + G S++ T LVDFY K E A F +
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV-IPNHVTFLAVLSACSYSGLSERGWE 447
N +SW+A+I+GY Q E+A++ F+ + + I N T+ ++ ACS G +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
+ + + + A +I + + G LD+A + S P W A ++ +
Sbjct: 409 VHADAIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYY 466
Query: 508 GNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
GN EK+ GM+P + +++ +L S +G + + L T+ RK
Sbjct: 467 GNASEALRLFEKMVSCGMKPNSV-TFIAVLTACSHAGLVEQGKHCLDTMLRK 517
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/582 (36%), Positives = 339/582 (58%), Gaps = 7/582 (1%)
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
G T + ++ C L+ + +++ G + G + ++ + N ++ ++ G + + RK+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 182 ADMPERDAVSWMTLISGLVDSG-NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
+ MPE D VSW ++I L S + EA FL TF++++ A + L
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISG 299
E+G+QIH ALK + +++ ALI Y KCG ++ + +F +M E+ V WNS+ISG
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
Y +AL + M +G ++D F + V+ A +A+LE + HA VR SD
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM-L 418
+V + LVD YSK GR++ A F+ M +N SWN++I+GY HGQGE+A+++FE M L
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
+ P+HVTF+ VLSACS++GL E G++ F SMS + + PR H++CM ++LGR G L
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 479 DEAFALIRSAPVEPTKNMWVALLTA-CRMHGNLV-LGKFAAEKLYGMEPGKLSSYVMLLN 536
D+ I P++P +W +L A CR +G LGK AAE L+ +EP +YV+L N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 537 MYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
MY++ G+ + K +K + SW+ +K + F+ GDKSH IY+K+
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 597 LMDEISRHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGIAYGLINTPDWT-PLQITQGHR 654
L ++ GY+ + L D+++E ++ IL YHSE L +A+ L T P++I + R
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 655 VCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
VCG+CH+A K I+ + GR+I++RD++RFHHF++G CSC D+W
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 152/296 (51%), Gaps = 9/296 (3%)
Query: 128 ALVNVCVGLRSIRGVKRVF-GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
+ V CVG R G R F + N + D+Y+ N +++ ++ G + ARK+F +MP
Sbjct: 8 SFVQSCVGHR---GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV--GR 244
R+ VSW ++SG +G + EA M +E F +++RA +G + + GR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKC-GSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
QIH K D+ V+ LI MY KC GS+ A C F + K++V WNSIIS Y+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTI-SIVIRICARL-ASLEHAKQAHAALVRHGFGSDIV 361
G A I+ M+ G++ ++T S+V C+ + +Q + + G +D+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+GLV ++K G + AR VF++M +N ++ N L+ G GE+A ++F M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 11/375 (2%)
Query: 114 LEGDGADVGGSTYDALVNVCVGLR--SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRC 171
++ DG+ T+ +LV L +R ++++ + +G DL++ + ++ +
Sbjct: 197 MQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 172 GLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV 231
G + ARK+F M R+AV+ L+ GLV EA + F+ M D ++ ++
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILL 315
Query: 232 RASAGLGLIE-----VGRQIHSCALKRGVGEDSF-VACALIDMYSKCGSIEDAQCVFDQM 285
+ L E GR++H + G+ + + L++MY+KCGSI DA+ VF M
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFM 375
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
+K +V WNS+I+G G EA+ Y MR FT+ + CA L + +
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
Q H ++ G ++ + L+ Y++ G + + R +F M + +SWN++I
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 406 QG-EQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 464
+ +A+ F R N +TF +VLSA S E G +I + ++ + + A
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATT 554
Query: 465 YACMIELLGREGLLD 479
+I G+ G +D
Sbjct: 555 ENALIACYGKCGEMD 569
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
R HS K + +D ++ LI+ Y + G A+ VFD+MP ++ V W I+SGY+
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS--LEHAKQAHAALVRHGFGSDI 360
G +EAL +M G +Q+ V+R C + S + +Q H + + + D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 361 VANTGLVDFYSKW-GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
V + L+ Y K G + A F + KN +SWN++I+ Y G A +F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 420 ERVIPNHVTFLA-VLSACSYS 439
+ P TF + V +ACS +
Sbjct: 200 DGSRPTEYTFGSLVTTACSLT 220
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
A+ H+ L ++ D+ L++ Y + G AR VFD M +N +SW +++GY
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG 440
+G+ ++A+ M++E + N F++VL AC G
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 317/547 (57%), Gaps = 15/547 (2%)
Query: 156 PDLYMMNRVLHMHVRC--GLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
PD + R +H C G + +AR++F +M ER ++W T+++G + +A + F
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC-ALIDMYSKC 272
M E+ ++ +M+ G IE ++ + V +AC A+I +
Sbjct: 228 VMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV-----IACNAMISGLGQK 278
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
G I A+ VFD M E++ W ++I + G+ EAL +++ M+ G + T+ ++
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISIL 338
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
+CA LASL H KQ HA LVR F D+ + L+ Y K G + ++ +FDR K++I
Sbjct: 339 SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDII 398
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQM-LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
WN++I+GY +HG GE+A+++F +M L PN VTF+A LSACSY+G+ E G +I+ S
Sbjct: 399 MWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYES 458
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV 511
M VKP HYACM+++LGR G +EA +I S VEP +W +LL ACR H L
Sbjct: 459 MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
Query: 512 LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVK 571
+ +F A+KL +EP +Y++L NMY+S G+ + A + K +K + + P CSW EV+
Sbjct: 519 VAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVE 578
Query: 572 KQPYAFLCGD-KSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQ-RILKYHS 629
+ +AF G SH + + I + +D L + GY + L DVDEEE+ LKYHS
Sbjct: 579 NKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHS 638
Query: 630 EMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGT 689
E L +AY L+ + P+++ + RVC +CH AIK+I+ V REI++RDA+RFHHFRNG
Sbjct: 639 ERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGE 698
Query: 690 CSCGDYW 696
CSC DYW
Sbjct: 699 CSCKDYW 705
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/515 (21%), Positives = 224/515 (43%), Gaps = 74/515 (14%)
Query: 81 VMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGG-STYDALVNVCVGLRSI 139
+ P T+ + +I L+ + EA LF D D S+++++V
Sbjct: 14 TIPPPTANV--RITHLSRIGKIHEARKLF-------DSCDSKSISSWNSMVAGYFANLMP 64
Query: 140 RGVKRVFGYMISNGFEPDLYMM--NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLIS 197
R +++F M PD ++ N ++ +++ G + +ARK+F MPER+ VSW L+
Sbjct: 65 RDARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVK 118
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
G V +G A F M E+ ++ M+ +G ++ GR +C L + +
Sbjct: 119 GYVHNGKVDVAESLFWKMPEK----NKVSWTVML-----IGFLQDGRIDDACKLYEMIPD 169
Query: 258 -DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM 316
D+ ++I K G +++A+ +FD+M E+S + W ++++GY ++A I+
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF--- 226
Query: 317 RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRM 376
D + + + + ++ + +E A++ + ++A ++ + G +
Sbjct: 227 -DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV----KPVIACNAMISGLGQKGEI 281
Query: 377 EDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
AR VFD M +N SW +I + +G +A+++F M ++ V P T +++LS C
Sbjct: 282 AKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Query: 437 SYSGLSERGWEIFYSMSR------------------------------DHKVKPRAMHYA 466
+ G ++ + R D + +
Sbjct: 342 ASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 467 CMIELLGREGLLDEAFALIRSAPV----EPTKNMWVALLTACRMHGNLVLG---KFAAEK 519
+I GL +EA + P+ +P + +VA L+AC G + G + E
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 520 LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
++G++P + Y +++M +G+ EA ++ ++
Sbjct: 462 VFGVKP-ITAHYACMVDMLGRAGRFNEAMEMIDSM 495
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 182/404 (45%), Gaps = 32/404 (7%)
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
R+ H+ R G + +ARKLF + SW ++++G + +A + F +E D
Sbjct: 23 RITHLS-RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLF----DEMPDR 77
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
++ +V G I+ R++ +R V AL+ Y G ++ A+ +F
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVAESLF 133
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+MPEK+ V W ++ G+ G ++A +Y + D D + +I + ++
Sbjct: 134 WKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVD 189
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
A++ + ++ T +V Y + R++DAR +FD M K +SW +++ GY
Sbjct: 190 EAREIFDEMSERS----VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
+G+ E A E+FE M + VI + A++S G + +F SM +
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACN----AMISGLGQKGEIAKARRVFDSMKERNDAS--- 298
Query: 463 MHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK 519
+ +I++ R G EA F L++ V PT +++L+ C +L GK +
Sbjct: 299 --WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 520 LYGMEPGKLSSYV--MLLNMYSSSGKLMEAAGVLKTLKRKGLTM 561
L + + YV +L+ MY G+L+++ + K + M
Sbjct: 357 LVRCQ-FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 49/332 (14%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA+DLF +++ +G T ++++VC L S+ K+V ++ F+ D+Y+ +
Sbjct: 314 EALDLFILMQKQGVRPTF--PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASV 371
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM-WEEFNDG 222
++ M+++CG ++ ++ +F P +D + W ++ISG G EA + F M
Sbjct: 372 LMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKP 431
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA--CALIDMYSKCGSIEDAQC 280
TF + A + G++E G +I+ +++ G A ++DM + G +A
Sbjct: 432 NEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPITAHYACMVDMLGRAGRFNEAME 490
Query: 281 VFDQMP-EKSTVGWNSIISGYALRGYSEEALS-------IYLEMRDSGAKIDQFTISIVI 332
+ D M E W S++ A R +S+ ++ I +E +SG I +S +
Sbjct: 491 MIDSMTVEPDAAVWGSLLG--ACRTHSQLDVAEFCAKKLIEIEPENSGTYI---LLSNMY 545
Query: 333 RICARLASL-EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
R A + E K LVR G W +E+ H F R
Sbjct: 546 ASQGRWADVAELRKLMKTRLVRKSPG-------------CSWTEVENKVHAFTR------ 586
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQ---MLRE 420
G +H + E +++ ++ +LRE
Sbjct: 587 -------GGINSHPEQESILKILDELDGLLRE 611
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/620 (35%), Positives = 331/620 (53%), Gaps = 56/620 (9%)
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLM---LD-ARKLFADMP 185
+N C R+IR + ++ I +G D +L L LD A K+F MP
Sbjct: 30 INNC---RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFL---CMWEEFNDGRSRTFATMVRASAGLGLIEV 242
+R+ SW T+I G +S L M +EF + TF ++++A A G I+
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC---------------------- 280
G+QIH ALK G G D FV L+ MY CG ++DA+
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 281 -----------------------VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
+FD+M ++S V WN++ISGY+L G+ ++A+ ++ EM+
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+ + T+ V+ +RL SLE + H G D V + L+D YSK G +E
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
A HVF+R+ R+NVI+W+A+I G+ HGQ AI+ F +M + V P+ V ++ +L+ACS
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMW 497
+ GL E G F M ++PR HY CM++LLGR GLLDEA I + P++P +W
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 498 VALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
ALL ACRM GN+ +GK A L M P +YV L NMY+S G E + + +K K
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 558 GLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV 617
+ P CS I++ + F+ D SH + KEI + + D++ GY +L ++
Sbjct: 507 DIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNL 566
Query: 618 DEEE-QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVV 676
+EE+ + +L YHSE + A+GLI+T P++I + R+C +CH++IKLI+ V R+I V
Sbjct: 567 EEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITV 626
Query: 677 RDASRFHHFRNGTCSCGDYW 696
RD RFHHF++G+CSC DYW
Sbjct: 627 RDRKRFHHFQDGSCSCMDYW 646
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 327/600 (54%), Gaps = 29/600 (4%)
Query: 123 GSTYDALVNVCVGLRSIRGVKRV-FGYMISNGFEPDLYMMNRVLH--------------- 166
G + DAL +C + S + V V F ++ F PD + R+LH
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 167 -----MHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
M+ + G M ++R++ MP RD V+W LI G + + +A F M E
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE--- 457
Query: 222 GRSRTFATMVRA-SAGL---GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
G S + T+V SA L L+E G+ +H+ + G D V +LI MY+KCG +
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+Q +F+ + ++ + WN++++ A G+ EE L + +MR G +DQF+ S + A+
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 577
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
LA LE +Q H V+ GF D D YSK G + + + + +++ SWN L
Sbjct: 578 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 637
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I+ G HG E+ F +ML + P HVTF+++L+ACS+ GL ++G + ++RD
Sbjct: 638 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 697
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAA 517
++P H C+I+LLGR G L EA I P++P +W +LL +C++HGNL G+ AA
Sbjct: 698 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 757
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAF 577
E L +EP S YV+ NM++++G+ + V K + K + CSW+++K + +F
Sbjct: 758 ENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 817
Query: 578 LCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIAY 636
GD++H QT EIY K++++ I GY+ + L D DEE+ + L HSE L +AY
Sbjct: 818 GIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAY 877
Query: 637 GLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
L++TP+ + ++I + R+C +CH+ K ++ V GR IV+RD RFHHF G CSC DYW
Sbjct: 878 ALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 242/538 (44%), Gaps = 48/538 (8%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+E +D+++ + G+G ++ +++ C L+ +++ G ++ +G E L + N
Sbjct: 142 EEVIDIYK--GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 199
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M G + A +F M ERD +SW ++ + +G+ E+F F M ++
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
S T +T++ + + GR IH +K G V L+ MY+ G +A VF
Sbjct: 260 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 319
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
QMP K + WNS+++ + G S +AL + M SG ++ T + + C E
Sbjct: 320 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 379
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
+ H +V G + + LV Y K G M ++R V +M R++V++WNALI GY
Sbjct: 380 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG-LSERG-----WEIFYSMSRDH 456
++A+ F+ M E V N++T ++VLSAC G L ERG + + D
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM--WVALLTACRMHGNLVLGK 514
VK +I + + G L + L +N+ W A+L A HG+
Sbjct: 500 HVKN------SLITMYAKCGDLSSSQDLFNGL---DNRNIITWNAMLAANAHHGH----- 545
Query: 515 FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP 574
E++ + K+ S+ + L+ +S S L AA L L+ +G + + +
Sbjct: 546 --GEEVLKL-VSKMRSFGVSLDQFSFSEGL-SAAAKLAVLE-EGQQLHGLAVKLGFEHDS 600
Query: 575 YAFLCGDKSHTQTKEIYQKV--------------DNLMDEISRHGYIEE-----HEML 613
+ F +++ EI + V + L+ + RHGY EE HEML
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 232/502 (46%), Gaps = 73/502 (14%)
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+V G++ +G D+Y+ +LH++ GL+ +RK+F +MP+R+ VSW +L+ G D G
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE-VGRQIHSCALKRGVGEDSFVA 262
E + + M E G + ++V +S GL E +GRQI +K G+ V
Sbjct: 140 EPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
+LI M G+++ A +FDQM E+ T+ WNSI + YA G+ EE+ I+ MR +
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
++ T+S ++ + + + + H +V+ GF S + L+ Y+ GR +A V
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
F +M K++ISWN+L+A + N G+ A+ + M+ N+VTF + L+AC
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 443 ERG---------WEIFYS----------------MSRDHKV---KPR--AMHYACMIELL 472
E+G +FY+ MS +V PR + + +I
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438
Query: 473 GREGLLDEAFALIRSAPVEPTKNMW---VALLTACRMHGNLVLGKFAAEKLYGMEPGK-L 528
+ D+A A ++ VE + + V++L+AC + G+L +E GK L
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL------------LERGKPL 486
Query: 529 SSYVM-------------LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPY 575
+Y++ L+ MY+ G L + + L + + +W
Sbjct: 487 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII-----TW-------N 534
Query: 576 AFLCGDKSHTQTKEIYQKVDNL 597
A L + H +E+ + V +
Sbjct: 535 AMLAANAHHGHGEEVLKLVSKM 556
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Query: 167 MHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRT 226
M+ + G + AR LF MP R+ VSW T++SG+V G Y E E F M + S
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 227 FATMVRASAGLG-LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
A++V A G + G Q+H K G+ D +V+ A++ +Y G + ++ VF++M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
P+++ V W S++ GY+ +G EE + IY MR G ++ ++S+VI C L +
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
Q +V+ G S + L+ G ++ A ++FD+M ++ ISWN++ A Y +G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
E++ +F M R N T +LS +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%), Gaps = 2/215 (0%)
Query: 268 MYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT 327
MY+K G ++ A+ +FD MP ++ V WN+++SG G E + + +M D G K F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 328 ISIVIRICARLASL-EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM 386
I+ ++ C R S+ Q H + + G SD+ +T ++ Y +G + +R VF+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 387 LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
+NV+SW +L+ GY + G+ E+ I++++ M E V N + V+S+C G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
+I + + A+ + +I +LG G +D A
Sbjct: 181 QIIGQVVKSGLESKLAVENS-LISMLGSMGNVDYA 214
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 339/607 (55%), Gaps = 9/607 (1%)
Query: 92 QIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMIS 151
++ +LA + + E++ L+ + G D ++ ++ C L +++ ++
Sbjct: 24 RLRELAYQSLFSESISLYRSMLRSGSSPD--AFSFPFILKSCASLSLPVSGQQLHCHVTK 81
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD--AVSWMTLISGLVDSGNYAEAF 209
G E + +++ ++ M+ +CGL+ DARK+F + P+ +V + LISG + +A
Sbjct: 82 GGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAA 141
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
F M E S T +V + +GR +H +K G+ + V + I MY
Sbjct: 142 YMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY 201
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
KCGS+E + +FD+MP K + WN++ISGY+ G + + L +Y +M+ SG D FT+
Sbjct: 202 MKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLV 261
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
V+ CA L + + + + +GF ++ + + Y++ G + AR VFD M K
Sbjct: 262 SVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
+++SW A+I YG HG GE + +F+ M++ + P+ F+ VLSACS+SGL+++G E+F
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
+M R++K++P HY+C+++LLGR G LDEA I S PVEP +W ALL AC++H N
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 510 LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+ + + A K+ EP + YV++ N+YS S + ++ + P S++E
Sbjct: 442 VDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Query: 570 VKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRILKYHS 629
K + + FL GD+SH QT+E+++ +D L + +E + D EE + HS
Sbjct: 502 HKGRVHLFLAGDRSHEQTEEVHRMLDELETSV-----MELAGNMDCDRGEEVSSTTREHS 556
Query: 630 EMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGT 689
E L IA+G++N+ T + + + RVC +CH +K ++ + R+ VVRDASRFH+F++G
Sbjct: 557 ERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGV 616
Query: 690 CSCGDYW 696
CSC DYW
Sbjct: 617 CSCKDYW 623
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 183/373 (49%), Gaps = 7/373 (1%)
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
+ W + L ++E+ + M + + +F ++++ A L L G+Q+H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKS--TVGWNSIISGYALRGYS 306
K G + FV ALI MY KCG + DA+ VF++ P+ S +V +N++ISGY
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKV 137
Query: 307 EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGL 366
+A ++ M+++G +D T+ ++ +C L + H V+ G S++
Sbjct: 138 TDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
+ Y K G +E R +FD M K +I+WNA+I+GY +G +E++EQM V P+
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 427 VTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
T ++VLS+C++ G + G E+ + + P I + R G L +A A+
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 487 SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKL 544
PV+ + W A++ MHG +G + + G+ P + +VM+L+ S SG
Sbjct: 317 IMPVKSLVS-WTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG-AVFVMVLSACSHSGLT 374
Query: 545 MEAAGVLKTLKRK 557
+ + + +KR+
Sbjct: 375 DKGLELFRAMKRE 387
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 313/544 (57%), Gaps = 10/544 (1%)
Query: 155 EPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLC 214
EPD + N +L +VR A+ F MP +DA SW T+I+G G +A E F
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 215 MWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS 274
M E+ ++ M+ G +E A RGV A+I Y K
Sbjct: 181 MMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYMKAKK 232
Query: 275 IEDAQCVFDQMP-EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIR 333
+E A+ +F M K+ V WN++ISGY E+ L ++ M + G + + +S +
Sbjct: 233 VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALL 292
Query: 334 ICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS 393
C+ L++L+ +Q H + + +D+ A T L+ Y K G + DA +F+ M +K+V++
Sbjct: 293 GCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA 352
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 453
WNA+I+GY HG ++A+ +F +M+ ++ P+ +TF+AVL AC+++GL G F SM
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Query: 454 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG 513
RD+KV+P+ HY CM++LLGR G L+EA LIRS P P ++ LL ACR+H N+ L
Sbjct: 413 RDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELA 472
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
+FAAEKL + + YV L N+Y+S + + A V K +K + +P SWIE++ +
Sbjct: 473 EFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNK 532
Query: 574 PYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEML 632
+ F D+ H + I++K+ L ++ GY E E L +V+EE+ +++L +HSE L
Sbjct: 533 VHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKL 592
Query: 633 GIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSC 692
+A+G I P + +Q+ + R+CG+CH AIK I+ + REI+VRD +RFHHF++G+CSC
Sbjct: 593 AVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSC 652
Query: 693 GDYW 696
GDYW
Sbjct: 653 GDYW 656
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/581 (33%), Positives = 336/581 (57%), Gaps = 2/581 (0%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G ++ +T ++ C R I + V + F + N +L M+ +CG + A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
+ +F +M +R VS+ ++I+G G EA + F M EE T ++ A
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
L++ G+++H + +G D FV+ AL+DMY+KCGS+++A+ VF +M K + WN+II
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 298 SGYALRGYSEEALSIY-LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
GY+ Y+ EALS++ L + + D+ T++ V+ CA L++ + ++ H ++R+G+
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
SD LVD Y+K G + A +FD + K+++SW +IAGYG HG G++AI +F Q
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 476
M + + + ++F+++L ACS+SGL + GW F M + K++P HYAC++++L R G
Sbjct: 591 MRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTG 650
Query: 477 LLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLN 536
L +A+ I + P+ P +W ALL CR+H ++ L + AEK++ +EP YV++ N
Sbjct: 651 DLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMAN 710
Query: 537 MYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
+Y+ + K + + K + ++GL P CSWIE+K + F+ GD S+ +T+ I +
Sbjct: 711 IYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRK 770
Query: 597 LMDEISRHGYIEEHEMLLPDVDE-EEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRV 655
+ + GY + L D +E E++ L HSE L +A G+I++ +++T+ RV
Sbjct: 771 VRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRV 830
Query: 656 CGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
CG+CH K ++ +T REIV+RD++RFH F++G CSC +W
Sbjct: 831 CGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 234/462 (50%), Gaps = 16/462 (3%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
+ +LA + ++ LF+ ++ G ++ T+ + LRS+ G +++ G+++ +
Sbjct: 167 MNELAKSGDFSGSIGLFK--KMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKS 224
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF + N ++ +++ + ARK+F +M ERD +SW ++I+G V +G + F
Sbjct: 225 GFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVF 284
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLG---LIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
+ M G AT+V AG LI +GR +HS +K + L+DMY
Sbjct: 285 VQM---LVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
SKCG ++ A+ VF +M ++S V + S+I+GYA G + EA+ ++ EM + G D +T++
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
V+ CAR L+ K+ H + + G DI + L+D Y+K G M++A VF M K
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWEI 448
++ISWN +I GY + +A+ +F +L E R P+ T VL AC+ ++G EI
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 449 FYSMSRDHKVKPRAMHYA-CMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
+ R+ R H A ++++ + G L A L + + W ++ MH
Sbjct: 522 HGYIMRNGYFSDR--HVANSLVDMYAKCGALLLAHMLFDDIASKDLVS-WTVMIAGYGMH 578
Query: 508 --GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEA 547
G + F + G+E ++ S+V LL S SG + E
Sbjct: 579 GFGKEAIALFNQMRQAGIEADEI-SFVSLLYACSHSGLVDEG 619
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 182/329 (55%), Gaps = 6/329 (1%)
Query: 120 DVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARK 179
D+ T +++ +C +S++ K V ++ NGF D + +++ M+ CG + +A +
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 180 LFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL 239
+F ++ A+ W L++ L SG+++ + F M + S TF+ + ++ + L
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
+ G Q+H LK G GE + V +L+ Y K ++ A+ VFD+M E+ + WNSII+G
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA--RLASLEHAKQAHAALVRHGFG 357
Y G +E+ LS++++M SG +ID TI V CA RL SL A H+ V+ F
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA--VHSIGVKACFS 328
Query: 358 -SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
D NT L+D YSK G ++ A+ VF M ++V+S+ ++IAGY G +A+++FE+
Sbjct: 329 REDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERG 445
M E + P+ T AVL+ C+ L + G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEG 416
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 163/319 (51%), Gaps = 7/319 (2%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA+ LFE +E EG DV T A++N C R + KRV ++ N D+++ N
Sbjct: 380 EAVKLFEEMEEEGISPDV--YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DG 222
++ M+ +CG M +A +F++M +D +SW T+I G + EA F + EE
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSP 497
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
RT A ++ A A L + GR+IH ++ G D VA +L+DMY+KCG++ A +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
D + K V W +I+GY + G+ +EA++++ +MR +G + D+ + ++ C+ ++
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 343 HAKQAHAALVRH--GFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIA 399
+ ++RH + +VD ++ G + A + M + + W AL+
Sbjct: 618 EGWR-FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 676
Query: 400 GYGNHGQGEQAIEMFEQML 418
G H + A ++ E++
Sbjct: 677 GCRIHHDVKLAEKVAEKVF 695
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 322/594 (54%), Gaps = 42/594 (7%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRC---GLMLDARKLFADMPERDAVSWMTLISG 198
+K++ M+ G D Y + + L + + A+ +F D W +I G
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRG 89
Query: 199 LVDSGNYAEA---FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
S + +++ LC N + TF ++++A + L E QIH+ K G
Sbjct: 90 FSCSDEPERSLLLYQRMLCSSAPHN---AYTFPSLLKACSNLSAFEETTQIHAQITKLGY 146
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA-------------- 301
D + +LI+ Y+ G+ + A +FD++PE V WNS+I GY
Sbjct: 147 ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRK 206
Query: 302 ------------LRGY-----SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
+ GY ++EAL ++ EM++S + D +++ + CA+L +LE
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQG 266
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNH 404
K H+ L + D V L+D Y+K G ME+A VF + +K+V +W ALI+GY H
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 405 GQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 464
G G +AI F +M + + PN +TF AVL+ACSY+GL E G IFYSM RD+ +KP H
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEH 386
Query: 465 YACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME 524
Y C+++LLGR GLLDEA I+ P++P +W ALL ACR+H N+ LG+ E L ++
Sbjct: 387 YGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAID 446
Query: 525 PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSH 584
P YV N+++ K +AA + +K +G+ +P CS I ++ + FL GD+SH
Sbjct: 447 PYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Query: 585 TQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV--DEEEQRILKYHSEMLGIAYGLINTP 642
+ ++I K + ++ +GY+ E E +L D+ D+E + I+ HSE L I YGLI T
Sbjct: 507 PEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK 566
Query: 643 DWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
T ++I + RVC +CH KLI+ + R+IV+RD +RFHHFR+G CSCGDYW
Sbjct: 567 PGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 147/291 (50%), Gaps = 2/291 (0%)
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
VN + ++ G ++ + EPD N V+ +V+ G M A LF M E++A
Sbjct: 153 VNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
+SW T+ISG V + EA + F M + + + A + A A LG +E G+ IHS
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
K + DS + C LIDMY+KCG +E+A VF + +KS W ++ISGYA G+ EA
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG-LVD 368
+S ++EM+ G K + T + V+ C+ +E K ++ R + + G +VD
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 369 FYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+ G +++A+ M L+ N + W AL+ H E E+ E ++
Sbjct: 393 LLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/594 (36%), Positives = 331/594 (55%), Gaps = 10/594 (1%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
E ++LF + G D T ++++ C L R + + Y+I+ GF D+ + N
Sbjct: 280 EGLELF--FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
+ M++ G +A KLF+ M +D VSW T+ISG + +A + + M ++
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
T A ++ A A LG ++ G ++H A+K + VA LI+MYSKC I+ A +F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
+P K+ + W SII+G L EAL I+L + + T++ + CAR+ +L
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMC 516
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
K+ HA ++R G G D L+D Y + GRM A F+ +K+V SWN L+ GY
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSE 575
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
GQG +E+F++M++ RV P+ +TF+++L CS S + +G +++S D+ V P
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFSKMEDYGVTPNLK 634
Query: 464 HYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM 523
HYAC+++LLGR G L EA I+ PV P +W ALL ACR+H + LG+ +A+ ++ +
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFEL 694
Query: 524 EPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKS 583
+ + Y++L N+Y+ GK E A V + +K GLT+ CSW+EVK + +AFL DK
Sbjct: 695 DKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKY 754
Query: 584 HTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE---QRILKYHSEMLGIAYGLIN 640
H QTKEI ++ +++S G + E +DE E I HSE IA+GLIN
Sbjct: 755 HPQTKEINTVLEGFYEKMSEVGLTKISES--SSMDETEISRDEIFCGHSERKAIAFGLIN 812
Query: 641 TPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGD 694
T P+ +T+ +C NCH+ +K I+ REI VRDA FHHF++G CSCGD
Sbjct: 813 TVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 21/426 (4%)
Query: 92 QIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMIS 151
Q+ L + +EAM L ++ V + ALV +C R+ +V+ +S
Sbjct: 65 QLHGLCANGKLEEAMKLLN--SMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALS 122
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
+ + + N L M VR G ++DA +F M ER+ SW L+ G G + EA
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 212 FLCM-WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYS 270
+ M W TF ++R G+ + G+++H ++ G D V ALI MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
KCG ++ A+ +FD+MP + + WN++ISGY G E L ++ MR D T++
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
VI C L + HA ++ GF DI L Y G +A +F RM RK+
Sbjct: 303 VISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKD 362
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 450
++SW +I+GY + ++AI+ + M ++ V P+ +T AVLSAC+ G + G E+
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-- 420
Query: 451 SMSRDHK--VKPRAMHYAC----MIELLGREGLLDEAFALIRSAPVEPTKNM--WVALLT 502
HK +K R + Y +I + + +D+A + + P KN+ W +++
Sbjct: 421 -----HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNI---PRKNVISWTSIIA 472
Query: 503 ACRMHG 508
R++
Sbjct: 473 GLRLNN 478
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/491 (26%), Positives = 221/491 (45%), Gaps = 45/491 (9%)
Query: 102 YKEAMDLFE-ILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
+ EAM L+ +L + G DV T+ ++ C G+ + K V +++ G+E D+ +
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDV--YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDV 233
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
+N ++ M+V+CG + AR LF MP RD +SW +ISG ++G E E F M
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSV 293
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
D T +++ A LG +GR IH+ + G D V +L MY GS +A+
Sbjct: 294 DPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEK 353
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
+F +M K V W ++ISGY ++A+ Y M K D+ T++ V+ CA L
Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGD 413
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAG 400
L+ + H ++ S ++ L++ YSK ++ A +F + RKNVISW ++IAG
Sbjct: 414 LDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG 473
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPN-------------------------HV-------- 427
+ + +A+ QM + + PN HV
Sbjct: 474 LRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLD 532
Query: 428 TFL--AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
FL A+L G W F S +D V + E G+ ++ E F +
Sbjct: 533 DFLPNALLDMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYSE-RGQGSMVVELFDRM 589
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL--YGMEPGKLSSYVMLLNMYSSSGK 543
+ V P + +++LL C + G K+ YG+ P L Y ++++ +G+
Sbjct: 590 VKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTP-NLKHYACVVDLLGRAGE 648
Query: 544 LMEAAGVLKTL 554
L EA ++ +
Sbjct: 649 LQEAHKFIQKM 659
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 121/308 (39%), Gaps = 45/308 (14%)
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
+ G G EEA+ + M++ +D+ ++R+C + E + ++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
+ + + ++G + DA +VF +M +N+ SWN L+ GY G ++A+ ++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 417 ML-RERVIPNHVTFLAVLSACSYSGLSERGWEI--------------------------- 448
ML V P+ TF VL C RG E+
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 449 --------FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
F M R + AM + EGL E F +R V+P ++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGL--ELFFAMRGLSVDPDLMTLTSV 303
Query: 501 LTACRMHGNLVLGK----FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
++AC + G+ LG+ + + ++ +S L MY ++G EA + ++R
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNS---LTQMYLNAGSWREAEKLFSRMER 360
Query: 557 KGLTMLPT 564
K + T
Sbjct: 361 KDIVSWTT 368
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/585 (33%), Positives = 335/585 (57%), Gaps = 31/585 (5%)
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
D L++ +I+G++ + GY++ +G + N +++ + + L D+R+ F D P+
Sbjct: 20 DLLLSSARTRSTIKGLQ-LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 187 R--------------DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
+ + + WM+L E ++ + +D + +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSL-----------EFLKKMMAGNLRPDD---HVLPSATK 124
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG 292
+ A L ++GR +H ++K G D FV +L+DMY+KCG I A+ +FD+MP+++ V
Sbjct: 125 SCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVT 184
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
W+ ++ GYA G +EEAL ++ E ++ ++ S VI +CA LE +Q H +
Sbjct: 185 WSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSI 244
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
+ F S + LV YSK G E A VF+ + KN+ WNA++ Y H ++ IE
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F++M + PN +TFL VL+ACS++GL + G F M ++ +++P HYA ++++L
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDML 363
Query: 473 GREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYV 532
GR G L EA +I + P++PT+++W ALLT+C +H N L FAA+K++ + P ++
Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHI 423
Query: 533 MLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
L N Y++ G+ +AA K L+ +G SW+E + + + F G++ H ++KEIY+
Sbjct: 424 SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYE 483
Query: 593 KVDNLMDEISRHGYIEEHEMLLPDVD-EEEQRILKYHSEMLGIAYGLINTPDWTPLQITQ 651
K+ L +E+ + GYI + +L +VD +E+ + ++YHSE L IA+GLI P P+++ +
Sbjct: 484 KLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMK 543
Query: 652 GHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
RVCG+CHNAIK +++ T R I+VRD +RFH F +G CSC DYW
Sbjct: 544 NLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/533 (38%), Positives = 309/533 (57%), Gaps = 18/533 (3%)
Query: 170 RCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFAT 229
R G + +AR +F +M ER+ V+W T+I+G + A + F M E+ ++ +
Sbjct: 184 REGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTS 239
Query: 230 MVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC-ALIDMYSKCGSIEDAQCVFDQMPEK 288
M+ G IE + + V +AC A+I + + G I A+ VFD M ++
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPV-----IACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAH 348
W +I Y +G+ EAL ++ +M+ G + ++ ++ +CA LASL++ +Q H
Sbjct: 295 DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVH 354
Query: 349 AALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGE 408
A LVR F D+ + L+ Y K G + A+ VFDR K++I WN++I+GY +HG GE
Sbjct: 355 AHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGE 414
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+A+++F +M +PN VT +A+L+ACSY+G E G EIF SM V P HY+C
Sbjct: 415 EALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCT 474
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL 528
+++LGR G +D+A LI S ++P +W ALL AC+ H L L + AA+KL+ EP
Sbjct: 475 VDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNA 534
Query: 529 SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGD-KSHTQT 587
+YV+L ++ +S K + A V K ++ ++ P CSWIEV K+ + F G K+H +
Sbjct: 535 GTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQ 594
Query: 588 KEI---YQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPD 643
I +K D L+ E GY + +L DVDEEE+ L HSE L +AYGL+ P+
Sbjct: 595 AMILMMLEKTDGLLRE---AGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPE 651
Query: 644 WTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
P+++ + RVCG+CH AIKLI+ VT REI++RDA+RFHHF NG CSC DYW
Sbjct: 652 GVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/510 (19%), Positives = 217/510 (42%), Gaps = 64/510 (12%)
Query: 85 STSGLCS-QIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
ST CS +I +L+ + EA F+ L+ + G +++++V+ + +
Sbjct: 15 STGVNCSFEISRLSRIGKINEARKFFDSLQFKAIG------SWNSIVSGYFSNGLPKEAR 68
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
++F M E ++ N ++ +++ ++++AR +F MPER+ VSW ++ G + G
Sbjct: 69 QLFDEM----SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC 263
EA F M E + F ++ G I+ R+++ + D +
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDD----GRIDKARKLYDMMPVK----DVVAST 176
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
+I + G +++A+ +FD+M E++ V W ++I+GY + A ++ E+ ++
Sbjct: 177 NMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEV 235
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
++ + + R+ E + ++A ++ + + G + AR VF
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPM-------KPVIACNAMIVGFGEVGEISKARRVF 288
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
D M ++ +W +I Y G +A+++F QM ++ V P+ + +++LS C+ +
Sbjct: 289 DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 444 RGWEIFYSMSR------------------------------DHKVKPRAMHYACMIELLG 473
G ++ + R D + + +I
Sbjct: 349 YGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYA 408
Query: 474 REGLLDEAFALIRSAPVE---PTKNMWVALLTACRMHGNLVLGKFAAEKL---YGMEPGK 527
GL +EA + P P K +A+LTAC G L G E + + + P
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTP-T 467
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+ Y ++M +G++ +A +++++ K
Sbjct: 468 VEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 55/309 (17%)
Query: 251 LKRGVGEDSFVACAL-IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
L+R + V C+ I S+ G I +A+ FD + K+ WNSI+SGY G +EA
Sbjct: 8 LRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEA 67
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
++ EM + ++V+ GLV
Sbjct: 68 RQLFDEMSE---------------------------------------RNVVSWNGLVSG 88
Query: 370 YSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
Y K + +AR+VF+ M +NV+SW A++ GY G +A +F +M ER N V++
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM-PER---NEVSW 144
Query: 430 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP 489
+ G ++ +++ M V MI L REG +DEA LI
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVKDVVAS-----TNMIGGLCREGRVDEA-RLIFDEM 198
Query: 490 VEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLS-SYVMLLNMYSSSGKLMEAA 548
E W ++T R + + + A KL+ + P K S+ +L Y+ SG++ +A
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE 254
Query: 549 GVLKTLKRK 557
+ + K
Sbjct: 255 EFFEVMPMK 263
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 339/608 (55%), Gaps = 46/608 (7%)
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
+ +C R++ K + +++ G + N +++++ +CG A ++F +MP RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR--TFATMVRASAGLGLIEVGRQIH 247
++W ++++ L + N + + R F+ +V+A A LG I+ GRQ+H
Sbjct: 70 IAWASVLTAL-NQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 248 SCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSE 307
+ D V +L+DMY+KCG + A+ VFD + K+T+ W +++SGYA G E
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 308 EAL-------------------------------SIYLEMRDSGAKI-DQFTISIVIRIC 335
EAL S++ EMR I D +S ++ C
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
A LA+ +Q H ++ GF S + + L+D Y+K + A+ +F RM ++V+SW
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
+LI G HGQ E+A+ +++ M+ V PN VTF+ ++ ACS+ G E+G E+F SM++D
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF 515
+ ++P HY C+++LLGR GLLDEA LI + P P + W ALL+AC+ G +G
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 516 AAEKLY-GMEPGKLSSYVMLLNMYSSS---GKLMEAAGVLKTLK-RKGLTMLPTCSWIEV 570
A+ L + S+Y++L N+Y+S+ GK+ EA L ++ RK P S +EV
Sbjct: 429 IADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKD----PGHSSVEV 484
Query: 571 KKQPYAFLCGDKSHTQTKEIYQKVDNLMDEIS-RHGYIEEHEMLLPDVDEEE-QRILKYH 628
+K+ F G+ SH ++I++ + L +E+ R+GY+ + +L D+DE+E +++L +H
Sbjct: 485 RKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWH 544
Query: 629 SEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNG 688
SE +AYGL+ TP++I + RVCG+CH +K I+ +T REI+VRDA+R+HHF+ G
Sbjct: 545 SERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGG 604
Query: 689 TCSCGDYW 696
CSC D+W
Sbjct: 605 KCSCNDFW 612
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 158/340 (46%), Gaps = 34/340 (10%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+ ALV C L SI ++V + I + + D + + ++ M+ +CGL+ A+ +F +
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQF-------LCMWEEFNDG--------------- 222
++ +SW ++SG SG EA E F L W G
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 223 ---RSR-------TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
R R +++V A A L GRQ+H + G F++ ALIDMY+KC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
+ A+ +F +M + V W S+I G A G +E+AL++Y +M G K ++ T +I
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 333 RICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKN 390
C+ + +E ++ ++ + +G + T L+D + G +++A ++ M +
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+W AL++ G+G+ I + + ++ + + T++
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYI 446
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/582 (34%), Positives = 322/582 (55%), Gaps = 46/582 (7%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D ++ + M+ CG + AR +F +M RD V+W T+I G EAF+ F M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 217 E------------------------------EF---NDGRSRT--FATMVRASAGLGLIE 241
+ EF ND R T +V AG G ++
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+ R+ ++ + FV+ A++ YSKCG ++DAQ +FDQ +K V W ++IS Y
Sbjct: 265 MAREF----FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
Y +EAL ++ EM SG K D ++ VI CA L L+ AK H+ + +G S++
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
N L++ Y+K G ++ R VF++M R+NV+SW+++I HG+ A+ +F +M +E
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V PN VTF+ VL CS+SGL E G +IF SM+ ++ + P+ HY CM++L GR LL EA
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+I S PV +W +L++ACR+HG L LGKFAA+++ +EP + V++ N+Y+
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYARE 560
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
+ + + + ++ K + S I+ + + FL GDK H Q+ EIY K+D ++ ++
Sbjct: 561 QRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKL 620
Query: 602 SRHGYIEEHEMLLPDVDEEEQR-ILKYHSEMLGIAYGLINTPDWTP------LQITQGHR 654
GY+ + +L DV+EEE++ ++ +HSE L + +GL+N ++I + R
Sbjct: 621 KLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLR 680
Query: 655 VCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
VC +CH KL++ V REI+VRD +RFH ++NG CSC DYW
Sbjct: 681 VCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 281 VFDQMPEK-STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
VF +P ++ +N + + + Y +R G ++DQF+ +++ ++++
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
+L + H + D TG +D Y+ GR+ AR+VFD M ++V++WN +I
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
Y G ++A ++FE+M V+P+ + ++SAC +G + R Y ++ V+
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG-NMRYNRAIYEFLIENDVR 244
Query: 460 PRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVA 499
++ + G +D A R V +N++V+
Sbjct: 245 MDTHLLTALVTMYAGAGCMDMAREFFRKMSV---RNLFVS 281
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 318/574 (55%), Gaps = 2/574 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+D + +GL + K V G ++ + D + +L ++ + G M DA K+F +M
Sbjct: 249 TFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM 308
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P+ D V W +I+ +G EA + F+ M E F T ++++ A +G
Sbjct: 309 PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE 368
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q+H +K G D +V+ ALID+Y+KC ++ A +F ++ K+ V WN++I GY G
Sbjct: 369 QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG 428
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+A S++ E + + + T S + CA LAS++ Q H ++ + +
Sbjct: 429 EGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN 488
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+D Y+K G ++ A+ VF+ M +V SWNALI+GY HG G QA+ + + M P
Sbjct: 489 SLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKP 548
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
N +TFL VLS CS +GL ++G E F SM RDH ++P HY CM+ LLGR G LD+A L
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKL 608
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
I P EP+ +W A+L+A N + +AE++ + P ++YV++ NMY+ + +
Sbjct: 609 IEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQW 668
Query: 545 MEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH 604
A + K++K G+ P SWIE + + F G H K I ++ L + +R
Sbjct: 669 ANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRA 728
Query: 605 GYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPDW-TPLQITQGHRVCGNCHNA 662
GY+ + +L D+D+EE+ + L HSE L +AYGL+ P + I + R+C +CH+A
Sbjct: 729 GYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSA 788
Query: 663 IKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+K+I+ + R++V+RD +RFHHF G CSCGD+W
Sbjct: 789 MKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 184/367 (50%), Gaps = 21/367 (5%)
Query: 91 SQIEKLAL-CNRYKEAMDLFEI----LELEGDGADVGG---STYDALVNVCVGLRSIRGV 142
+Q +L + CNR ++ F + L+LE + + G Y A++ C+
Sbjct: 11 AQTRRLMIRCNRIRQCG--FSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISA 68
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K + ++ G DL+ N +L+ +V+ G DA LF +MPER+ VS++TL G
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQG---- 124
Query: 203 GNYA--EAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
YA + + + E ++ F + ++ L E+ +HS +K G ++F
Sbjct: 125 --YACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
V ALI+ YS CGS++ A+ VF+ + K V W I+S Y GY E++L + MR +G
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
+ +T ++ L + + AK H +++ + D GL+ Y++ G M DA
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY-- 438
VF+ M + +V+ W+ +IA + +G +A+++F +M V+PN T ++L+ C+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 439 -SGLSER 444
SGL E+
Sbjct: 363 CSGLGEQ 369
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 308/537 (57%), Gaps = 2/537 (0%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N +++ +VR G +++ARK+F +MP+R +W +I+GL+ E F M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
T ++ SAGL + +G+QIH +K G+ D V +L MY + G ++D + V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
MP ++ V WN++I G A G E L +Y M+ SG + ++ T V+ C+ LA
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
+Q HA ++ G S + + L+ YSK G + DA F ++ + W+++I+ Y
Sbjct: 209 GQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAY 268
Query: 402 GNHGQGEQAIEMFEQMLRERVIP-NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
G HGQG++AIE+F M + + N V FL +L ACS+SGL ++G E+F M + KP
Sbjct: 269 GFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 328
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
HY C+++LLGR G LD+A A+IRS P++ +W LL+AC +H N + + +++
Sbjct: 329 GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 388
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
++P + YV+L N+++S+ + + + V K+++ K + SW E K + + F G
Sbjct: 389 LQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMG 448
Query: 581 DKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLI 639
D+S +++KEIY + L E+ GY + +L D+DEEE+ L HSE L +A+ L+
Sbjct: 449 DRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALM 508
Query: 640 NTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
P+ P++I + RVC +CH A K I+++ REI +RD SRFHHF NG CSCGDYW
Sbjct: 509 ILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 7/363 (1%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+E + LF E+ G G T ++ + GLRS+ +++ GY I G E DL + +
Sbjct: 73 EEGLSLFR--EMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNS 130
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
+ HM++R G + D + MP R+ V+W TLI G +G + M
Sbjct: 131 SLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRP 190
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
TF T++ + + L + G+QIH+ A+K G V +LI MYSKCG + DA F
Sbjct: 191 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-SGAKIDQFTISIVIRICARLASL 341
+ ++ V W+S+IS Y G +EA+ ++ M + + +I++ ++ C+
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 342 EHAKQAHAALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIA 399
+ + +V ++GF + T +VD + G ++ A + M ++ +++ W L++
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
H E A +F+++L ++ PN +L+ S R RD VK
Sbjct: 371 ACNIHKNAEMAQRVFKEIL--QIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 428
Query: 460 PRA 462
A
Sbjct: 429 KEA 431
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/578 (33%), Positives = 321/578 (55%), Gaps = 39/578 (6%)
Query: 154 FEPDLYMMNRVLH-MHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
P ++N LH + G + + LF + D + I+ +G +AF +
Sbjct: 59 LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLY 118
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
+ + + TF++++++ + + G+ IH+ LK G+G D +VA L+D+Y+K
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKG 174
Query: 273 GSIEDAQCVFDQMPEKS-------------------------------TVGWNSIISGYA 301
G + AQ VFD+MPE+S V WN +I GYA
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 302 LRGYSEEALSIYLEMRDSG-AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G+ +AL ++ ++ G K D+ T+ + C+++ +LE + H + ++
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNV 294
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR- 419
TGL+D YSK G +E+A VF+ RK++++WNA+IAGY HG + A+ +F +M
Sbjct: 295 KVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
+ P +TF+ L AC+++GL G IF SM +++ +KP+ HY C++ LLGR G L
Sbjct: 355 TGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
A+ I++ ++ +W ++L +C++HG+ VLGK AE L G+ YV+L N+Y+
Sbjct: 415 RAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
Query: 540 SSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMD 599
S G A V +K KG+ P S IE++ + + F GD+ H+++KEIY + + +
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISE 534
Query: 600 EISRHGYIEEHEMLLPDVDE-EEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGN 658
I HGY+ +L D++E E+++ L+ HSE L IAYGLI+T +PL+I + RVC +
Sbjct: 535 RIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSD 594
Query: 659 CHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
CH KLI+ +TGR+IV+RD +RFHHF +G+CSCGD+W
Sbjct: 595 CHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 333/602 (55%), Gaps = 41/602 (6%)
Query: 133 CVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD--ARKLFADMPERDAV 190
C+ L I K++ G+++ G + Y++ +++ + G+ +D AR++ + R+
Sbjct: 59 CINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPF 115
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCA 250
W +I G G + EA + CM +E S TF+ +++A + + +GRQ H+
Sbjct: 116 LWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT 175
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE----------------------- 287
+ +V +IDMY KC SI+ A+ VFD+MPE
Sbjct: 176 FRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 288 --------KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
K V W ++++G+A +EAL + M SG + D+ T++ I CA+L
Sbjct: 236 ELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295
Query: 340 SLEHAKQAHAALVRHGFG-SD-IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+ ++A +A + G+ SD +V + L+D YSK G +E+A +VF M KNV +++++
Sbjct: 296 ASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSM 355
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
I G HG+ ++A+ +F M+ + I PN VTF+ L ACS+SGL ++G ++F SM +
Sbjct: 356 ILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTF 415
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
V+P HY CM++LLGR G L EA LI++ VEP +W ALL ACR+H N + + A
Sbjct: 416 GVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIA 475
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKK-QPY 575
AE L+ +EP + +Y++L N+Y+S+G V K +K KGL P SW+ K Q +
Sbjct: 476 AEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMH 535
Query: 576 AFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQR-ILKYHSEMLGI 634
F G+ +H + +I K++ L++ ++ GY + + DV + +R IL H+E L +
Sbjct: 536 KFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLAL 595
Query: 635 AYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGD 694
A+ L+ T + + I + R+C +CH ++L + VTG+ I++RD RFHHFR+G CSCGD
Sbjct: 596 AFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGD 655
Query: 695 YW 696
+W
Sbjct: 656 FW 657
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 321/592 (54%), Gaps = 29/592 (4%)
Query: 123 GSTYDALVNVCVGLRSIRGVKRV-FGYMISNGFEPDLYMMNRVLH--------------- 166
G + DAL +C + S + V V F ++ F PD + R+LH
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383
Query: 167 -----MHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
M+ + G M ++R++ MP RD V+W LI G + + +A F M E
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE--- 440
Query: 222 GRSRTFATMVRA-SAGL---GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
G S + T+V SA L L+E G+ +H+ + G D V +LI MY+KCG +
Sbjct: 441 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 500
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+Q +F+ + ++ + WN++++ A G+ EE L + +MR G +DQF+ S + A+
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAK 560
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
LA LE +Q H V+ GF D D YSK G + + + + +++ SWN L
Sbjct: 561 LAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNIL 620
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I+ G HG E+ F +ML + P HVTF+++L+ACS+ GL ++G + ++RD
Sbjct: 621 ISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFG 680
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAA 517
++P H C+I+LLGR G L EA I P++P +W +LL +C++HGNL G+ AA
Sbjct: 681 LEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAA 740
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAF 577
E L +EP S YV+ NM++++G+ + V K + K + CSW+++K + +F
Sbjct: 741 ENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 800
Query: 578 LCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIAY 636
GD++H QT EIY K++++ I GY+ + L D DEE+ + L HSE L +AY
Sbjct: 801 GIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAY 860
Query: 637 GLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNG 688
L++TP+ + ++I + R+C +CH+ K ++ V GR IV+RD RFHHF G
Sbjct: 861 ALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 242/538 (44%), Gaps = 48/538 (8%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+E +D+++ + G+G ++ +++ C L+ +++ G ++ +G E L + N
Sbjct: 125 EEVIDIYK--GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M G + A +F M ERD +SW ++ + +G+ E+F F M ++
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
S T +T++ + + GR IH +K G V L+ MY+ G +A VF
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
QMP K + WNS+++ + G S +AL + M SG ++ T + + C E
Sbjct: 303 KQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFE 362
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
+ H +V G + + LV Y K G M ++R V +M R++V++WNALI GY
Sbjct: 363 KGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG-LSERG-----WEIFYSMSRDH 456
++A+ F+ M E V N++T ++VLSAC G L ERG + + D
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM--WVALLTACRMHGNLVLGK 514
VK +I + + G L + L +N+ W A+L A HG+
Sbjct: 483 HVKN------SLITMYAKCGDLSSSQDLFNGL---DNRNIITWNAMLAANAHHGH----- 528
Query: 515 FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP 574
E++ + K+ S+ + L+ +S S L AA L L+ +G + + +
Sbjct: 529 --GEEVLKL-VSKMRSFGVSLDQFSFSEGL-SAAAKLAVLE-EGQQLHGLAVKLGFEHDS 583
Query: 575 YAFLCGDKSHTQTKEIYQKV--------------DNLMDEISRHGYIEE-----HEML 613
+ F +++ EI + V + L+ + RHGY EE HEML
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 232/502 (46%), Gaps = 73/502 (14%)
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+V G++ +G D+Y+ +LH++ GL+ +RK+F +MP+R+ VSW +L+ G D G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE-VGRQIHSCALKRGVGEDSFVA 262
E + + M E G + ++V +S GL E +GRQI +K G+ V
Sbjct: 123 EPEEVIDIYKGMRGE-GVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
+LI M G+++ A +FDQM E+ T+ WNSI + YA G+ EE+ I+ MR +
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
++ T+S ++ + + + + H +V+ GF S + L+ Y+ GR +A V
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
F +M K++ISWN+L+A + N G+ A+ + M+ N+VTF + L+AC
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 443 ERG---------WEIFYS----------------MSRDHKV---KPR--AMHYACMIELL 472
E+G +FY+ MS +V PR + + +I
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 473 GREGLLDEAFALIRSAPVEPTKNMW---VALLTACRMHGNLVLGKFAAEKLYGMEPGK-L 528
+ D+A A ++ VE + + V++L+AC + G+L +E GK L
Sbjct: 422 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL------------LERGKPL 469
Query: 529 SSYVM-------------LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPY 575
+Y++ L+ MY+ G L + + L + + +W
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII-----TW-------N 517
Query: 576 AFLCGDKSHTQTKEIYQKVDNL 597
A L + H +E+ + V +
Sbjct: 518 AMLAANAHHGHGEEVLKLVSKM 539
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLG-LIEV 242
MP R+ VSW T++SG+V G Y E E F M + S A++V A G +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
G Q+H K G+ D +V+ A++ +Y G + ++ VF++MP+++ V W S++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
+G EE + IY MR G ++ ++S+VI C L +Q +V+ G S +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
L+ G ++ A ++FD+M ++ ISWN++ A Y +G E++ +F M R
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 423 IPNHVTFLAVLSACSY 438
N T +LS +
Sbjct: 241 EVNSTTVSTLLSVLGH 256
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 285 MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL-EH 343
MP ++ V WN+++SG G E + + +M D G K F I+ ++ C R S+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
Q H + + G SD+ +T ++ Y +G + +R VF+ M +NV+SW +L+ GY +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
G+ E+ I++++ M E V N + V+S+C G +I + + A+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 464 HYACMIELLGREGLLDEA 481
+ +I +LG G +D A
Sbjct: 181 ENS-LISMLGSMGNVDYA 197
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 331/584 (56%), Gaps = 15/584 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ + C L ++ ++ G+ + GFE + + N ++ M+ +CG + +A K+F +
Sbjct: 109 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA--TMVRASAGLGLIEV 242
+R +SW +I+G V +G ++A + F M E R F ++++A + G+I
Sbjct: 169 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 228
Query: 243 GRQIHSCALKRGV--GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
G+QIH ++ G + + +L+D+Y KCG + A+ FDQ+ EK+ + W+S+I GY
Sbjct: 229 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 288
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
A G EA+ ++ +++ ++ID F +S +I + A A L KQ A V+ G +
Sbjct: 289 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 348
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
+VD Y K G +++A F M K+VISW +I GYG HG G++++ +F +MLR
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
+ P+ V +LAVLSACS+SG+ + G E+F + H +KPR HYAC+++LLGR G L E
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 481 AFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
A LI + P++P +W LL+ CR+HG++ LGK + L ++ ++YVM+ N+Y
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQ 528
Query: 541 SGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQT---KEIYQKVDNL 597
+G E + KGL SW+E++++ + F G+ SH T +E ++ +
Sbjct: 529 AGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERR 588
Query: 598 MDEISRHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGI----AYGLINTPDWTPLQITQG 652
+ E + Y +HE L D+D+E ++ L+ HSE L I A G +N T +++ +
Sbjct: 589 LREELGYVYGLKHE--LHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT-IRVFKN 645
Query: 653 HRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
RVC +CH IK ++ +T VVRDA RFH F +G CSCGDYW
Sbjct: 646 LRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 14/297 (4%)
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
+ + +++R GL + G Q+H LK G G + + LIDMY KC A VF
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
D MPE++ V W++++SG+ L G + +LS++ EM G ++FT S ++ C L +LE
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
Q H ++ GF + LVD YSK GR+ +A VF R++ +++ISWNA+IAG+
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 403 NHGQGEQAIEMFEQM----LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 458
+ G G +A++ F M ++ER P+ T ++L ACS +G+ G +I + R
Sbjct: 185 HAGYGSKALDTFGMMQEANIKER--PDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 459 KP-RAMHYACMIELLGREGLL---DEAFALIRSAPVEPTKNMWVALLTACRMHGNLV 511
P A +++L + G L +AF I+ E T W +L+ G V
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIK----EKTMISWSSLILGYAQEGEFV 295
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 355 bits (912), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/593 (33%), Positives = 325/593 (54%), Gaps = 5/593 (0%)
Query: 109 FEIL-ELEGDGADVGGSTYDAL--VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVL 165
F++L ++ G DV L V VC + +K + Y + F + + N +
Sbjct: 378 FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 437
Query: 166 HMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR 225
+ +CG + A+++F + + SW LI G S + + + L M S
Sbjct: 438 ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 497
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
T +++ A + L + +G+++H ++ + D FV +++ +Y CG + Q +FD M
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 557
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
+KS V WN++I+GY G+ + AL ++ +M G ++ ++ V C+ L SL +
Sbjct: 558 EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 617
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
+AHA ++H D L+D Y+K G + + VF+ + K+ SWNA+I GYG HG
Sbjct: 618 EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHG 677
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
++AI++FE+M R P+ +TFL VL+AC++SGL G M +KP HY
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 466 ACMIELLGREGLLDEAFALI-RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME 524
AC+I++LGR G LD+A ++ E +W +LL++CR+H NL +G+ A KL+ +E
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELE 797
Query: 525 PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSH 584
P K +YV+L N+Y+ GK + V + + L CSWIE+ ++ ++F+ G++
Sbjct: 798 PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFL 857
Query: 585 TQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPD 643
+EI L +IS+ GY + + D+ EEE+ L+ HSE L + YGLI T +
Sbjct: 858 DGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSE 917
Query: 644 WTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
T +++ + R+C +CHNA KLI+ V REIVVRD RFHHF+NG CSCGDYW
Sbjct: 918 GTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/522 (25%), Positives = 227/522 (43%), Gaps = 56/522 (10%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY ++ C G+ + V G ++ G D+++ N ++ + G + DA +LF M
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR----SRTFATMVRASAGLGLI 240
PER+ VSW ++I D+G E+F M EE DG T T++ A I
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+G+ +H A+K + ++ + AL+DMYSKCG I +AQ +F K+ V WN+++ G+
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 301 ALRGYSEEALSIYLEMRDSG--AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
+ G + + +M G K D+ TI + +C + L K+ H ++ F
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+ + V Y+K G + A+ VF + K V SWNALI G+ +++ QM
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 419 RERVIPNHVTFLAVLSACS----------YSGLSERGW---EIFYSMSR----------- 454
++P+ T ++LSACS G R W ++F +S
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 455 ------DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT---ACR 505
D + + +I + G D A + R + + ++++ AC
Sbjct: 549 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 506 MHGNLVLGKFA-AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT 564
+ +L LG+ A A L + L++MY+ +G + +++ V LK K T
Sbjct: 609 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK-----ST 663
Query: 565 CSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGY 606
SW A + G H KE + L +E+ R G+
Sbjct: 664 ASW-------NAMIMGYGIHGLAKEAIK----LFEEMQRTGH 694
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 215/455 (47%), Gaps = 12/455 (2%)
Query: 108 LFEILELEGDGA---DVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRV 164
L E++E GDGA DV +T ++ VC R I K V G+ + + +L + N +
Sbjct: 276 LGEMMEENGDGAFMPDV--ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 165 LHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS 224
+ M+ +CG + +A+ +F ++ VSW T++ G G+ F+ M D ++
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 225 R--TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
T V + +++H +LK+ + VA A + Y+KCGS+ AQ VF
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVF 453
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ K+ WN++I G+A +L +L+M+ SG D FT+ ++ C++L SL
Sbjct: 454 HGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLR 513
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
K+ H ++R+ D+ ++ Y G + + +FD M K+++SWN +I GY
Sbjct: 514 LGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 573
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
+G ++A+ +F QM+ + ++ + V ACS G E ++ + H ++ A
Sbjct: 574 QNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDA 632
Query: 463 MHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG--NLVLGKFAAEKL 520
+I++ + G + ++ + + T + W A++ +HG + F +
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHGLAKEAIKLFEEMQR 691
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
G P L +++ +L + SG + E L +K
Sbjct: 692 TGHNPDDL-TFLGVLTACNHSGLIHEGLRYLDQMK 725
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 142/293 (48%), Gaps = 7/293 (2%)
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
S D + R++ M+ CG D+R +F + ++ W +IS + Y E E
Sbjct: 113 STRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 211 QFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
F+ M + T+ +++A AG+ + +G +H +K G+ ED FV AL+ Y
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY 232
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR----DSGAKIDQ 325
G + DA +FD MPE++ V WNS+I ++ G+SEE+ + EM D D
Sbjct: 233 GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDV 292
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T+ V+ +CAR + K H V+ ++V N L+D YSK G + +A+ +F
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352
Query: 386 MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR--ERVIPNHVTFLAVLSAC 436
KNV+SWN ++ G+ G ++ QML E V + VT L + C
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+D V T ++ Y+ G +D+R VFD + KN+ WNA+I+ Y + ++ +E F +M
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 418 LRER-VIPNHVTFLAVLSACSYSGLSERG 445
+ ++P+H T+ V+ AC +G+S+ G
Sbjct: 178 ISTTDLLPDHFTYPCVIKAC--AGMSDVG 204
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 319/578 (55%), Gaps = 39/578 (6%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ C +I +++ G G L++ N ++ M+ +CG + +AR + +M
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
RD VSW +L+ G YA+ + F+D +EV R
Sbjct: 202 SRRDVVSWNSLVVG------YAQN--------QRFDDA-----------------LEVCR 230
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
++ S + G + + A+ + ++ ++ + +F +M +KS V WN +I Y
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTE--NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNA 288
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
EA+ +Y M G + D +I+ V+ C ++L K+ H + R +++
Sbjct: 289 MPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN 348
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+D Y+K G +E AR VF+ M ++V+SW A+I+ YG G+G A+ +F ++ ++P
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+ + F+ L+ACS++GL E G F M+ +K+ PR H ACM++LLGR G + EA+
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRF 468
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
I+ +EP + +W ALL ACR+H + +G AA+KL+ + P + YV+L N+Y+ +G+
Sbjct: 469 IQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRW 528
Query: 545 MEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH 604
E + +K KGL P S +EV + + FL GD+SH Q+ EIY+++D L+ ++
Sbjct: 529 EEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKEL 588
Query: 605 GYIEEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLINTPDW-----TPLQITQGHRVCGN 658
GY+ + E L DV+EE++ L HSE L I + L+NT + ++IT+ R+CG+
Sbjct: 589 GYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGD 648
Query: 659 CHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
CH A KLI+ +T REI++RD +RFH FR G CSCGDYW
Sbjct: 649 CHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 157/328 (47%), Gaps = 13/328 (3%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
I R +HS + + +S + L+ Y+ + A+ VFD++PE++ + N +I
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
Y G+ E + ++ M + D +T V++ C+ ++ ++ H + + G S
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ GLV Y K G + +AR V D M R++V+SWN+L+ GY + + + A+E+ +M
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGW--EIFYSMSRDHKVKPRAMHYACMIELLGREGL 477
++ + T ++L A S + + ++F+ M + V M M + E +
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 478 LDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYG-MEPGKLSSYVM--- 533
E ++ + + EP ++L AC L LGK K++G +E KL ++
Sbjct: 295 --ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGK----KIHGYIERKKLIPNLLLEN 348
Query: 534 -LLNMYSSSGKLMEAAGVLKTLKRKGLT 560
L++MY+ G L +A V + +K + +
Sbjct: 349 ALIDMYAKCGCLEKARDVFENMKSRDVV 376
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA++L+ +E DG + + +++ C ++ K++ GY+ P+L + N
Sbjct: 292 EAVELYS--RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENA 349
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ M+ +CG + AR +F +M RD VSW +IS SG +A F + +
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPD 409
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALK--RGVGEDSFVACALIDMYSKCGSIEDA-QC 280
S F T + A + GL+E GR + +AC ++D+ + G +++A +
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLAC-MVDLLGRAGKVKEAYRF 468
Query: 281 VFDQMPEKSTVGWNSII 297
+ D E + W +++
Sbjct: 469 IQDMSMEPNERVWGALL 485
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
R + +S L + K Q T+ ++ ++ + + H+ ++ +
Sbjct: 16 FRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSS 75
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
L+ Y+ + AR VFD + +NVI N +I Y N+G + +++F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA--CMIELLGREGLLD 479
V P+H TF VL ACS SG G +I S + KV + + ++ + G+ G L
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT---KVGLSSTLFVGNGLVSMYGKCGFLS 192
Query: 480 EA 481
EA
Sbjct: 193 EA 194
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 330/577 (57%), Gaps = 6/577 (1%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISN-GFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
Y L++ C+ +S+ ++ +++N + ++++++ + C + ARK+F D+
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 185 PERDAVS---WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE 241
+ ++ W + G +G+ +A ++ M F + + + + ++A L +
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR 253
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
VGR IH+ +KR D V L+ +Y + G +DA+ VFD M E++ V WNS+IS +
Sbjct: 254 VGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLS 313
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
+ E +++ +M++ T++ ++ C+R+A+L K+ HA +++ D+
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
L+D Y K G +E +R VFD ML K++ SWN ++ Y +G E+ I +FE M+
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V P+ +TF+A+LS CS +GL+E G +F M + +V P HYAC++++LGR G + EA
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+I + P +P+ ++W +LL +CR+HGN+ +G+ AA++L+ +EP +YVM+ N+Y+ +
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKV-DNLMDE 600
+ + +K++G+ CSW++VK + F+ G + + Y+KV L +
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEA 613
Query: 601 ISRHGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNC 659
I + GY ++L DVDEE + + HSE L Y LI+T + P++IT+ RVC +C
Sbjct: 614 IEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADC 673
Query: 660 HNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
H+ +K+++ VT R IV+RD RFHHF +G CSC DYW
Sbjct: 674 HSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 6/299 (2%)
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
G + + CV L+ +R + + ++ + D + N +L +++ GL DARK+F
Sbjct: 235 GNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVF 294
Query: 182 ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE 241
M ER+ V+W +LIS L E F F M EE T T++ A + + +
Sbjct: 295 DGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALL 354
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
G++IH+ LK D + +L+DMY KCG +E ++ VFD M K WN +++ YA
Sbjct: 355 TGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
+ G EE ++++ M +SG D T ++ C+ E+ + S +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 362 ANTG-LVDFYSKWGRMEDARHVFDRMLRKNVIS-WNALIAG---YGNHGQGE-QAIEMF 414
+ LVD + G++++A V + M K S W +L+ +GN GE A E+F
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 352 bits (902), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 202/615 (32%), Positives = 333/615 (54%), Gaps = 50/615 (8%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFE--PDLYMMNRVLHMHVRCGLMLDARKLFADMP- 185
L+ C +R K + + ++G + P Y+ N + + G M+ A+KLF ++P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 186 -ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
E+D V W TL+S G + + F+ M + + + + A L + +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCG------------------------------- 273
Q H A+K GV V AL+DMY KCG
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 274 SIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR-DSGAKIDQFTISIVI 332
+E + VF +MPE++ V W +++GY G++ E L + EM G ++ T+ ++
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 333 RICARLASLEHAKQAHAALVR-------HGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
CA+ +L + H ++ D++ T LVD Y+K G ++ + +VF
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 386 MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 445
M ++NV++WNAL +G HG+G I+MF QM+RE V P+ +TF AVLSACS+SG+ + G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 446 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACR 505
W F+S+ R + ++P+ HYACM++LLGR GL++EA L+R PV P + + +LL +C
Sbjct: 371 WRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCS 429
Query: 506 MHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTC 565
+HG + + + +L M PG +++ NMY + G+ A G+ +L+++G+ +P
Sbjct: 430 VHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGL 489
Query: 566 SWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLP----DVDEEE 621
S I V + F GD+SH +TKEIY K++ +++ I GY+ + L+ D++E+E
Sbjct: 490 SSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKE 549
Query: 622 QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASR 681
Q L HSE L + +GL+ T TPL + + R+C +CH+A+K+++ V REI++RD +R
Sbjct: 550 Q-ALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNR 608
Query: 682 FHHFRNGTCSCGDYW 696
FH F+ G+CSC DYW
Sbjct: 609 FHQFKGGSCSCSDYW 623
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 162/360 (45%), Gaps = 51/360 (14%)
Query: 105 AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRV 164
+M LF +E+ ++ + L VC L + ++ G + G + + N +
Sbjct: 95 SMKLF--VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNAL 152
Query: 165 LHMHVRCGLM---------------------LDA----------RKLFADMPERDAVSWM 193
+ M+ +CGL+ LD R++F +MPER+AV+W
Sbjct: 153 MDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWT 212
Query: 194 TLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFAT---MVRASAGLGLIEVGRQIHSCA 250
+++G + +G E E M F G F T M+ A A G + VGR +H A
Sbjct: 213 VMVAGYLGAGFTREVLELLAEMV--FRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYA 270
Query: 251 LKRGV--GE-----DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
LK+ + GE D V AL+DMY+KCG+I+ + VF M +++ V WN++ SG A+
Sbjct: 271 LKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMH 330
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G + ++ +M K D T + V+ C+ ++ + +L +G +
Sbjct: 331 GKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHY 389
Query: 364 TGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
+VD + G +E+A + M + N + +L+ HG+ +E+ E++ RE +
Sbjct: 390 ACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK----VEIAERIKRELI 445
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 18/268 (6%)
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGF--GSDIVANTGLVDFYSKWGRMEDARHVFDR 385
+ +++R CA + L K+ HA L G + L FY+ G M A+ +FD
Sbjct: 9 VRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 386 --MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY---SG 440
+ K+ + W L++ + +G ++++F +M R+RV + V+ + + C+ G
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 441 LSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
+++G + M VK ++++ G+ GL+ E + + + V L
Sbjct: 129 FAQQGHGVAVKMGVLTSVKV----CNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVL 184
Query: 501 LTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK--- 557
T + G L G+ E + M ++ +++ Y +G E +L + +
Sbjct: 185 DTVVKWEG-LERGR---EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 558 GLTMLPTCSWIEVKKQPYAFLCGDKSHT 585
GL + CS + Q + G H
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHV 268
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 300/542 (55%), Gaps = 5/542 (0%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D+ +M +L M+ + G + A ++F M +R+ V+W +I +G +AF F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
E+ +G T + ++E GR IH A++RG + ALIDMY +CG ++
Sbjct: 326 EQ--NGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
A+ +FD+M EK+ + WNSII+ Y G + AL ++ E+ DS D TI+ ++ A
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
SL ++ HA +V+ + S+ + LV Y+ G +EDAR F+ +L K+V+SWN+
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
+I Y HG G ++ +F +M+ RV PN TF ++L+ACS SG+ + GWE F SM R++
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
+ P HY CM++L+GR G A + P PT +W +LL A R H ++ + +FA
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYA 576
AE+++ ME YV+LLNMY+ +G+ + + ++ KG++ + S +E K + +
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682
Query: 577 FLCGDKSHTQTKEIYQKVDNLMDEISRHG-YIEEHEMLLPD-VDEEEQRILKYHSEMLGI 634
F GD+SH T +IY+ +D + + Y+ L P+ + + + HS L
Sbjct: 683 FTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLAT 742
Query: 635 AYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGD 694
+GLI+T + + R+C CH ++ + +T REIVV D+ FHHF NG CSCG+
Sbjct: 743 CFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGN 802
Query: 695 YW 696
YW
Sbjct: 803 YW 804
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 134/503 (26%), Positives = 244/503 (48%), Gaps = 51/503 (10%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I+ C Y EA+ + + G AD TY ++ G+ S+ K++ +I
Sbjct: 102 IKGFTSCGLYIEAVQFYSRMVFAGVKADT--FTYPFVIKSVAGISSLEEGKKIHAMVIKL 159
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF D+Y+ N ++ ++++ G DA K+F +MPERD VSW ++ISG + G + F
Sbjct: 160 GFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALG---DGFSSL 216
Query: 213 LCMWEEFNDG-RSRTFATM--VRASAGLGLIEVGRQIHSCALKRGVGE-DSFVACALIDM 268
+ E G + F+TM + A + + ++G++IH A++ + D V +++DM
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-SGAKIDQFT 327
YSK G + A+ +F+ M +++ V WN +I YA G +A + +M + +G + D T
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
I + A LE + H +R GF +V T L+D Y + G+++ A +FDRM
Sbjct: 337 ---SINLLPASAILE-GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
KNVISWN++IA Y +G+ A+E+F+++ ++P+ T ++L A + S G E
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 448 I---------------------FYSMSRDHKVKPRAMHYACMIELLGREGLLDE------ 480
I Y+M D + + ++ + +++ ++
Sbjct: 453 IHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGF 512
Query: 481 ------AFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSY 531
F+ + ++ V P K+ + +LL AC + G + G E + YG++PG + Y
Sbjct: 513 GRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPG-IEHY 571
Query: 532 VMLLNMYSSSGKLMEAAGVLKTL 554
+L++ +G A L+ +
Sbjct: 572 GCMLDLIGRTGNFSAAKRFLEEM 594
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 178/351 (50%), Gaps = 10/351 (2%)
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
+ R L LM DA +LF +M + DA W +I G G Y EA + + M
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
+ T+ ++++ AG+ +E G++IH+ +K G D +V +LI +Y K G DA+
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
VF++MPE+ V WNS+ISGY G +L ++ EM G K D+F+ + C+ + S
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 341 LEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
+ K+ H VR + D++ T ++D YSK+G + A +F+ M+++N+++WN +I
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIG 306
Query: 400 GYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACS-YSGLSERGWEIFYSMSRDHK 457
Y +G+ A F++M + + P+ +T + +L A + G + G Y+M R
Sbjct: 307 CYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHG----YAMRRG-- 360
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
P + +I++ G G L A +I E W +++ A +G
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNG 410
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 14/232 (6%)
Query: 220 NDGRSRTFATMVRASAGLGL---IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
N R+ F + + A L L +V +Q++ AL R + ++ +E
Sbjct: 33 NGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRA-----------LRGFADSRLME 81
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
DA +FD+M + WN +I G+ G EA+ Y M +G K D FT VI+ A
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
++SLE K+ HA +++ GF SD+ L+ Y K G DA VF+ M ++++SWN+
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
+I+GY G G ++ +F++ML+ P+ + ++ L ACS+ + G EI
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 333/627 (53%), Gaps = 34/627 (5%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
K+A+DLF + + + T +++ C L + ++V+ ++ ++G E + M++
Sbjct: 217 KDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+++C + A++LF + + + S V G EA F M +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC---------- 272
+ + + + + L I G+ H L+ G + ALIDMY KC
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 273 ---------------------GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
G ++ A F+ MPEK+ V WN+IISG EEA+
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 312 IYLEMRDS-GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
++ M+ G D T+ + C L +L+ AK + + ++G D+ T LVD +
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
S+ G E A +F+ + ++V +W A I G E+AIE+F+ M+ + + P+ V F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
L+ACS+ GL ++G EIFYSM + H V P +HY CM++LLGR GLL+EA LI P+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 491 EPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
EP +W +LL ACR+ GN+ + +AAEK+ + P + SYV+L N+Y+S+G+ + A V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 551 LKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEH 610
++K KGL P S I+++ + + F GD+SH + I +D + S G++ +
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 611 EMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMV 669
+L DVDE+E+ +L HSE L +AYGLI++ T ++I + RVC +CH+ K + V
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 670 TGREIVVRDASRFHHFRNGTCSCGDYW 696
REI++RD +RFH+ R G CSCGD+W
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 12/387 (3%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
LCN EA+ LF L + G T+ ++ C R+ ++ G ++ G+
Sbjct: 113 GLCN---EAILLF--LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
DL++ N ++H + CG + ARK+F +M ER+ VSW ++I G +A + F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 217 -EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+E S T ++ A A L +E G ++++ G+ + + AL+DMY KC +I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 276 EDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
+ A+ +FD+ + N++ S Y +G + EAL ++ M DSG + D+ ++ I C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 336 ARLASLEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISW 394
++L ++ K H ++R+GF S D + N L+D Y K R + A +FDRM K V++W
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICN-ALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
N+++AGY +G+ + A E FE M + N V++ ++S L E E+F SM
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEA 481
V + + G G LD A
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLA 489
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 40/310 (12%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIED---AQCVFDQMPEKST-VGWNSIISG 299
+ H K+G+ D L+ + G+ E A+ VF+ T +NS+I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
YA G EA+ ++L M +SG D++T + CA+ + + Q H +V+ G+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ LV FY++ G ++ AR VFD M +NV+SW ++I GY + A+++F +M+R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 420 -ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG----- 473
E V PN VT + V+SAC+ E G E Y+ R+ ++ + + ++++
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 474 --------------------------REGLLDEA---FALIRSAPVEPTKNMWVALLTAC 504
R+GL EA F L+ + V P + ++ +++C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 505 RMHGNLVLGK 514
N++ GK
Sbjct: 348 SQLRNILWGK 357
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 306/526 (58%), Gaps = 10/526 (1%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF----NDGRSRTFATMVR 232
A +F + + + T+I G V+ +FE+ LC + E N+ + T+ +++
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVN----VMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG 292
A L I G+QIH K G+ D FV +LI+MY +CG +E + VF+++ K+
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 293 WNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
W+S++S A G E L ++ M ++ K ++ + + CA +L H L
Sbjct: 201 WSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 352 VRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAI 411
+R+ +I+ T LVD Y K G ++ A H+F +M ++N ++++A+I+G HG+GE A+
Sbjct: 261 LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 412 EMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIEL 471
MF +M++E + P+HV +++VL+ACS+SGL + G +F M ++ KV+P A HY C+++L
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 472 LGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSY 531
LGR GLL+EA I+S P+E +W L+ CR+ N+ LG+ AA++L + Y
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDY 440
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIY 591
+++ N+YS + A + KGL P S +E+K + + F+ D+SH + KEIY
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIY 500
Query: 592 QKVDNLMDEISRHGYIEEHEMLLPDVDEEEQR-ILKYHSEMLGIAYGLINTPDWTPLQIT 650
+ + + ++ GY + +L +VDEEE++ LK HS+ + IA+GL+ TP + ++I
Sbjct: 501 KMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIA 560
Query: 651 QGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+ R+C +CH K I+M+ REIVVRD +RFH F+ GTCSC DYW
Sbjct: 561 RNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 151/319 (47%), Gaps = 5/319 (1%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P T + I ++EA+ + + G+ D TY L+ C L+SIR K
Sbjct: 95 PCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPD--NFTYPCLLKACTRLKSIREGK 152
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
++ G + G E D+++ N +++M+ RCG M + +F + + A SW +++S G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 204 NYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
++E F M E N + + A A G + +G IH L+ + V
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQ 272
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
+L+DMY KCG ++ A +F +M +++ + ++++ISG AL G E AL ++ +M G +
Sbjct: 273 TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG-LVDFYSKWGRMEDARH 381
D V+ C+ ++ ++ A +++ G + G LVD + G +E+A
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 382 VFDRM-LRKNVISWNALIA 399
+ + KN + W ++
Sbjct: 393 TIQSIPIEKNDVIWRTFLS 411
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 8/290 (2%)
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
S+ A +F + + T +N++I GY EEAL Y EM G + D FT ++
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
+ C RL S+ KQ H + + G +D+ L++ Y + G ME + VF+++ K
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT-FLAVLSACSYSGLSERGWEIFYS 451
SW+++++ G + + +F M E + + ++ L AC+ +G G I
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM-WVALLTACRMH--G 508
+ R+ + + ++++ + G LD+A + + +E N+ + A+++ +H G
Sbjct: 260 LLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQK--MEKRNNLTYSAMISGLALHGEG 316
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
L F+ G+EP + YV +LN S SG + E V + ++G
Sbjct: 317 ESALRMFSKMIKEGLEPDHV-VYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 313/564 (55%), Gaps = 11/564 (1%)
Query: 140 RGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL 199
+ +K++ ++ GF ++ ++L V G M AR++F +M + W TL G
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIEVGRQIHSCALKRGV 255
V + FE L ++++ D R T+ +V+A + LG G +H+ +K G
Sbjct: 85 VRN---QLPFESLL-LYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 140
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
G VA L+ MY K G + A+ +F+ M K V WN+ ++ G S AL + +
Sbjct: 141 GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 200
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M + D FT+ ++ C +L SLE ++ + + +I+ +D + K G
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
E AR +F+ M ++NV+SW+ +I GY +G +A+ +F M E + PN+VTFL VLSA
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 436 CSYSGLSERGWEIFYSM--SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT 493
CS++GL G F M S D ++PR HYACM++LLGR GLL+EA+ I+ PVEP
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD 380
Query: 494 KNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKT 553
+W ALL AC +H +++LG+ A+ L P S +V+L N+Y+++GK V
Sbjct: 381 TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSK 440
Query: 554 LKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEML 613
+++ G + S +E + + + F GDKSH Q+K IY+K+D ++ +I + GY+ + +
Sbjct: 441 MRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSV 500
Query: 614 LPDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGR 672
DV+ EE+ L +HSE L IA+GLI P+++ + R C +CH K ++ +T
Sbjct: 501 FHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTST 560
Query: 673 EIVVRDASRFHHFRNGTCSCGDYW 696
EI++RD +RFHHFRNG CSC ++W
Sbjct: 561 EIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 116 GDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLML 175
D T ++++ C L S+ + ++ + ++ + N L MH++CG
Sbjct: 203 ADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTE 262
Query: 176 DARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASA 235
AR LF +M +R+ VSW T+I G +G+ EA F M E TF ++ A +
Sbjct: 263 AARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS 322
Query: 236 GLGLIEVGRQIHSCAL----KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
GL+ G++ S + K AC ++D+ + G +E+A +MP +
Sbjct: 323 HAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC-MVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 292 G-WNSIISGYAL 302
G W +++ A+
Sbjct: 382 GIWGALLGACAV 393
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 332/626 (53%), Gaps = 34/626 (5%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
K+A+DLF + + + T +++ C L + ++V+ ++ ++G E + M++
Sbjct: 217 KDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+++C + A++LF + + + S V G EA F M +
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRP 335
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC---------- 272
+ + + + + L I G+ H L+ G + ALIDMY KC
Sbjct: 336 DRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIF 395
Query: 273 ---------------------GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
G ++ A F+ MPEK+ V WN+IISG EEA+
Sbjct: 396 DRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIE 455
Query: 312 IYLEMRDS-GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
++ M+ G D T+ + C L +L+ AK + + ++G D+ T LVD +
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
S+ G E A +F+ + ++V +W A I G E+AIE+F+ M+ + + P+ V F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
L+ACS+ GL ++G EIFYSM + H V P +HY CM++LLGR GLL+EA LI P+
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 491 EPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
EP +W +LL ACR+ GN+ + +AAEK+ + P + SYV+L N+Y+S+G+ + A V
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 551 LKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEH 610
++K KGL P S I+++ + + F GD+SH + I +D + S G++ +
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDL 755
Query: 611 EMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMV 669
+L DVDE+E+ +L HSE L +AYGLI++ T ++I + RVC +CH+ K + V
Sbjct: 756 SNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKV 815
Query: 670 TGREIVVRDASRFHHFRNGTCSCGDY 695
REI++RD +RFH+ R G CSCGD+
Sbjct: 816 YNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 12/387 (3%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
LCN EA+ LF L + G T+ ++ C R+ ++ G ++ G+
Sbjct: 113 GLCN---EAILLF--LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAK 167
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
DL++ N ++H + CG + ARK+F +M ER+ VSW ++I G +A + F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 217 -EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+E S T ++ A A L +E G ++++ G+ + + AL+DMY KC +I
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 276 EDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
+ A+ +FD+ + N++ S Y +G + EAL ++ M DSG + D+ ++ I C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 336 ARLASLEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISW 394
++L ++ K H ++R+GF S D + N L+D Y K R + A +FDRM K V++W
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWDNICN-ALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
N+++AGY +G+ + A E FE M + N V++ ++S L E E+F SM
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEK----NIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEA 481
V + + G G LD A
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLA 489
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 40/310 (12%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIED---AQCVFDQMPEKST-VGWNSIISG 299
+ H K+G+ D L+ + G+ E A+ VF+ T +NS+I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
YA G EA+ ++L M +SG D++T + CA+ + + Q H +V+ G+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ LV FY++ G ++ AR VFD M +NV+SW ++I GY + A+++F +M+R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 420 -ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG----- 473
E V PN VT + V+SAC+ E G E Y+ R+ ++ + + ++++
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 474 --------------------------REGLLDEA---FALIRSAPVEPTKNMWVALLTAC 504
R+GL EA F L+ + V P + ++ +++C
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 505 RMHGNLVLGK 514
N++ GK
Sbjct: 348 SQLRNILWGK 357
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (886), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 308/549 (56%), Gaps = 40/549 (7%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S + A +R +EA+ F ++ EG + ++ ++++ C GL + +V +
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEG--FVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
+ F D+Y+ + ++ M+ +CG + DA+++F +M +R+ VSW +LI+ +G EA +
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG-VGEDSFVACALIDMY 269
F M E + T A+++ A A L I+VG+++H +K + D ++ A +DMY
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 270 SKCGSIEDAQCVFDQMP-------------------------------EKSTVGWNSIIS 298
+KC I++A+ +FD MP E++ V WN++I+
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG- 357
GY G +EEALS++ ++ ++ + +++ CA LA L QAH +++HGF
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 358 -----SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
DI L+D Y K G +E+ VF +M+ ++ +SWNA+I G+ +G G +A+E
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALE 479
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F +ML P+H+T + VLSAC ++G E G F SM+RD V P HY CM++LL
Sbjct: 480 LFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLL 539
Query: 473 GREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYV 532
GR G L+EA ++I P++P +W +LL AC++H N+ LGK+ AEKL +EP YV
Sbjct: 540 GRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYV 599
Query: 533 MLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
+L NMY+ GK + V K+++++G+T P CSWI+++ + F+ DKSH + K+I+
Sbjct: 600 LLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHS 659
Query: 593 KVDNLMDEI 601
+D L+ E+
Sbjct: 660 LLDILIAEM 668
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 196/378 (51%), Gaps = 64/378 (16%)
Query: 124 STYDALVNVCVGLR-SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA 182
S + L++ C+ + S V+ V +I +GF ++++ NR++ + +CG + D R++F
Sbjct: 20 SPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEAFEQF-------LCMWEEFNDGRSR---------- 225
MP+R+ +W ++++GL G EA F C W G ++
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 226 --------------TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
+FA+++ A +GL + G Q+HS K D ++ AL+DMYSK
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
CG++ DAQ VFD+M +++ V WNS+I+ + G + EAL ++ M +S + D+ T++ V
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 332 IRICARLASLEHAKQAHAALVRHG-FGSDIVANTGLVDFYSKWGRMEDARHVFD------ 384
I CA L++++ ++ H +V++ +DI+ + VD Y+K R+++AR +FD
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 385 -------------------------RMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+M +NV+SWNALIAGY +G+ E+A+ +F + R
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKR 379
Query: 420 ERVIPNHVTFLAVLSACS 437
E V P H +F +L AC+
Sbjct: 380 ESVCPTHYSFANILKACA 397
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 37/352 (10%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP----------------- 286
R +H+ +K G + F+ LID YSKCGS+ED + VFD+MP
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 287 --------------EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
E+ WNS++SG+A EEAL + M G +++++ + V+
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
C+ L + Q H+ + + F SD+ + LVD YSK G + DA+ VFD M +NV+
Sbjct: 160 SACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVV 219
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
SWN+LI + +G +A+++F+ ML RV P+ VT +V+SAC+ + G E+ +
Sbjct: 220 SWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVL 512
++ K++ + +++ + + EA + S P+ +A + +
Sbjct: 280 VKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNV----IAETSMISGYAMAAS 335
Query: 513 GKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT 564
K A M + S+ L+ Y+ +G+ EA + LKR+ ++ PT
Sbjct: 336 TKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE--SVCPT 385
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 193/606 (31%), Positives = 318/606 (52%), Gaps = 6/606 (0%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNV-----CVGLRSIRGVKRVFGYMIS 151
A+ Y+ + FE+L+L G S + V C I K+ G +
Sbjct: 105 AMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLK 164
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
G ++ N +++M+ C +A ++ D+P D + + +SG ++ G + E +
Sbjct: 165 YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV 224
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
E + T+ + +R + L + + Q+HS ++ G + ALI+MY K
Sbjct: 225 LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGK 284
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
CG + AQ VFD ++ +I+ Y EEAL+++ +M +++T +I+
Sbjct: 285 CGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAIL 344
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
+ A L+ L+ H +++ G+ + ++ LV+ Y+K G +EDAR F M +++
Sbjct: 345 LNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDI 404
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
++WN +I+G +HG G +A+E F++M+ IPN +TF+ VL ACS+ G E+G F
Sbjct: 405 VTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQ 464
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV 511
+ + V+P HY C++ LL + G+ +A +R+AP+E W LL AC + N
Sbjct: 465 LMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYR 524
Query: 512 LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVK 571
LGK AE P YV+L N+++ S + A V + +G+ P SWI ++
Sbjct: 525 LGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIR 584
Query: 572 KQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQR-ILKYHSE 630
Q + FL D H + IY KV +M +I GY + DVDEE++ L YHSE
Sbjct: 585 NQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSE 644
Query: 631 MLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTC 690
L +AYGLI TP+ +PL +T+ R+C +CH+AIKLI+ ++ R IV+RD++RFHHF +G C
Sbjct: 645 KLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQC 704
Query: 691 SCGDYW 696
SC DYW
Sbjct: 705 SCCDYW 710
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 190/399 (47%), Gaps = 15/399 (3%)
Query: 127 DALVNVCVGLRSIRGVKRVFGYMI---SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+ L+ VC +R + + ++I + D Y +N +++++V+C + ARKLF
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRT---FATMV-RASAGLGL 239
MPER+ VSW ++ G +SG E + F M F G SR AT+V ++ + G
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM---FFSGESRPNEFVATVVFKSCSNSGR 151
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
IE G+Q H C LK G+ FV L+ MYS C +A V D +P ++S +SG
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
Y G +E L + + + + T +R+ + L L A Q H+ +VR GF ++
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ A L++ Y K G++ A+ VFD +N+ ++ Y E+A+ +F +M
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
+ V PN TF +L++ + L ++G ++ + + + M ++ + + G ++
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAE 518
+A W +++ C HG LG+ A E
Sbjct: 391 DARKAFSGMTFRDIVT-WNTMISGCSHHG---LGREALE 425
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 308/558 (55%), Gaps = 14/558 (2%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF D + +N ++ +V+ + ARKLF +M E + VSW ++ISG D G A F
Sbjct: 59 GFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMF 118
Query: 213 LCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
M E+ TFA++ +A + L +G+ IH+ G+ + V+ +L+DMY K
Sbjct: 119 QKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGK 178
Query: 272 CGSIEDAQCVFDQMPE--KSTVGWNSIISGYALRGYSEEALSIYLEMRD--SGAKIDQFT 327
C +E A+ VFD M ++ V W S+I+ YA EA+ ++ + + +QF
Sbjct: 179 CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFM 238
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
++ VI C+ L L+ K AH + R G+ S+ V T L+D Y+K G + A +F R+
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
+VIS+ ++I HG GE A+++F++M+ R+ PN+VT L VL ACS+SGL G E
Sbjct: 299 CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE 358
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV--EPTKNMWVALLTACR 505
M+ + V P + HY C++++LGR G +DEA+ L ++ V E +W ALL+A R
Sbjct: 359 YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGR 418
Query: 506 MHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTC 565
+HG + + A+++L S+Y+ L N Y+ SG ++ + +KR G C
Sbjct: 419 LHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
Query: 566 SWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGY------IEEHEMLLPDVDE 619
SWIE K Y F GD S ++ EI + + +L + G+ I + DVDE
Sbjct: 479 SWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDE 538
Query: 620 E-EQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRD 678
E + ++ H E L +AYGL++ P + ++I R+C +CH A KLI+ + REIVVRD
Sbjct: 539 EAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRD 598
Query: 679 ASRFHHFRNGTCSCGDYW 696
+RFH F+NG+C+C DYW
Sbjct: 599 VNRFHCFKNGSCTCRDYW 616
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 161/354 (45%), Gaps = 48/354 (13%)
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGY 305
+H+ LK G D+F L+ Y K I A+ +FD+M E + V W S+ISGY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 306 SEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+ ALS++ +M D +++T + V + C+ LA K HA L G +IV ++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 365 GLVDFYSKWGRMEDARHVFDRML--RKNVISWNALIAGYGNHGQGEQAIEMFEQ----ML 418
LVD Y K +E AR VFD M+ +NV+SW ++I Y + +G +AIE+F +
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 419 RERVIPNHVTFLAVLSACSY----------SGLSERG---------------WEIFYSMS 453
+R N +V+SACS GL RG + S+S
Sbjct: 231 SDR--ANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLS 288
Query: 454 RDHKVKPR-----AMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACR 505
K+ R + Y MI + GL + A L + + + P + +L AC
Sbjct: 289 CAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS 348
Query: 506 MHGNLVLG----KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
G + G AEK YG+ P Y +++M G++ EA + KT++
Sbjct: 349 HSGLVNEGLEYLSLMAEK-YGVVPDS-RHYTCVVDMLGRFGRVDEAYELAKTIE 400
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 163/348 (46%), Gaps = 13/348 (3%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ C L R K + + +G ++ + + ++ M+ +C + AR++F M
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSM 192
Query: 185 P--ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTF--ATMVRASAGLGLI 240
R+ VSW ++I+ + EA E F R+ F A+++ A + LG +
Sbjct: 193 IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL 252
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+ G+ H + G ++ VA +L+DMY+KCGS+ A+ +F ++ S + + S+I
Sbjct: 253 QWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAK 312
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV-RHGFGSD 359
A G E A+ ++ EM + T+ V+ C+ + + + + ++G D
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRM---LRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
T +VD ++GR+++A + + + + W AL++ HG+ E E ++
Sbjct: 373 SRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKR 432
Query: 417 MLRERVIPNHVT--FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
+++ VT ++A+ +A + SG E + M R VK RA
Sbjct: 433 LIQSN---QQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERA 477
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/599 (33%), Positives = 320/599 (53%), Gaps = 22/599 (3%)
Query: 119 ADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGF--EP-DLYMMNRVLHMHVRCGLML 175
A G+ + + ++ + +K++ + + + EP L++ ++L + +
Sbjct: 41 ASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVN 100
Query: 176 DARKLFADMPERDAVSWMTLISGLV-DSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRA 233
A ++F + + W TLI D EAF + M E + TF +++A
Sbjct: 101 YAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKA 160
Query: 234 SAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGW 293
A + G+Q+H +K G G D +V LI +Y CG ++ A+ VFD+MPE+S V W
Sbjct: 161 CAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR 353
NS+I G + AL ++ EM+ S + D +T+ V+ CA L SL AHA L+R
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 354 H---GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQA 410
D++ L++ Y K G + A VF M ++++ SWNA+I G+ HG+ E+A
Sbjct: 280 KCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEA 339
Query: 411 IEMFEQML--RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+ F++M+ RE V PN VTF+ +L AC++ G +G + F M RD+ ++P HY C+
Sbjct: 340 MNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI 399
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV-LGKFAAEKLYGMEPGK 527
++L+ R G + EA ++ S P++P +W +LL AC G V L + A + G +
Sbjct: 400 VDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDN 459
Query: 528 LSS-------YVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
SS YV+L +Y+S+ + + V K + G+ P CS IE+ + F G
Sbjct: 460 ESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAG 519
Query: 581 DKSHTQTKEIYQKVDNLMDEISRHGYIEEH-EMLLPDV--DEEEQRILKYHSEMLGIAYG 637
D SH QTK+IYQ++ + D + GY+ + + L D D ++ L+ HSE L IA+G
Sbjct: 520 DTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFG 579
Query: 638 LINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
LIN P TP++I + RVC +CH KLI+ V EI+VRD RFHHF++G+CSC DYW
Sbjct: 580 LINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 293/496 (59%), Gaps = 39/496 (7%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS------------------------- 274
+ +G++ H+ L G+ +D FV +L++MYS CG
Sbjct: 78 LPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNA 137
Query: 275 ------IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR-----DSGAKI 323
I+DA+ +FD+MPE++ + W+ +I+GY + G +EAL ++ EM+ ++ +
Sbjct: 138 YAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRP 197
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
++FT+S V+ C RL +LE K HA + ++ DIV T L+D Y+K G +E A+ VF
Sbjct: 198 NEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF 257
Query: 384 DRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQML-RERVIPNHVTFLAVLSACSYSGL 441
+ + +K+V +++A+I +G ++ ++F +M + + PN VTF+ +L AC + GL
Sbjct: 258 NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGL 317
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALL 501
G F M + + P HY CM++L GR GL+ EA + I S P+EP +W +LL
Sbjct: 318 INEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Query: 502 TACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTM 561
+ RM G++ + A ++L ++P +YV+L N+Y+ +G+ ME + ++ KG+
Sbjct: 378 SGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
Query: 562 LPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE 621
+P CS++EV+ + F+ GD+S +++ IY +D +M + GY+ + + +L D++E++
Sbjct: 438 VPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKD 497
Query: 622 QRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDAS 680
+ I L YHSE L IA+ L+ T TP++I + R+CG+CH +K+I+ + REIVVRD +
Sbjct: 498 KEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCN 557
Query: 681 RFHHFRNGTCSCGDYW 696
RFHHFR+G+CSC D+W
Sbjct: 558 RFHHFRDGSCSCRDFW 573
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 13/292 (4%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G D +L+N+ +R +RVF + DL N V++ + + GL+ DA
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVF----DDSGSKDLPAWNSVVNAYAKAGLIDDA 147
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW-----EEFNDGRSRTFATMVR 232
RKLF +MPER+ +SW LI+G V G Y EA + F M E F T +T++
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV- 291
A LG +E G+ +H+ K V D + ALIDMY+KCGS+E A+ VF+ + K V
Sbjct: 208 ACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVK 267
Query: 292 GWNSIISGYALRGYSEEALSIYLEMRDS-GAKIDQFTISIVIRICARLASLEHAKQAHAA 350
++++I A+ G ++E ++ EM S + T ++ C + K
Sbjct: 268 AYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKM 327
Query: 351 LVRH-GFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG 400
++ G I +VD Y + G +++A M + +V+ W +L++G
Sbjct: 328 MIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 12/243 (4%)
Query: 93 IEKLALCNRYKEAMDLFEILEL-EGDGADVGGS--TYDALVNVCVGLRSIRGVKRVFGYM 149
I +C +YKEA+DLF ++L + + A V + T +++ C L ++ K V Y+
Sbjct: 166 INGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Query: 150 ISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM-PERDAVSWMTLISGLVDSGNYAEA 208
E D+ + ++ M+ +CG + A+++F + ++D ++ +I L G E
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDEC 285
Query: 209 FEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKR-GVGEDSFVACALI 266
F+ F M N + S TF ++ A GLI G+ ++ G+ ++
Sbjct: 286 FQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMV 345
Query: 267 DMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYALRG---YSEEALS--IYLEMRDSG 320
D+Y + G I++A+ MP E + W S++SG + G E AL I L+ +SG
Sbjct: 346 DLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSG 405
Query: 321 AKI 323
A +
Sbjct: 406 AYV 408
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 328/602 (54%), Gaps = 14/602 (2%)
Query: 101 RYKEAMDLFEILELEGDGAD--VGGSTYDALVNVCVGLRSIR--GVKRVFGYMISNGFEP 156
R KEA++++ ++ D S + A ++ + + R G+ + G +SN
Sbjct: 145 RSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSN---- 200
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
+++ + ++ M+V+ G +A+ + + E+D V LI G G EA + F M
Sbjct: 201 -VFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
E T+A+++ + L I G+ IH +K G +L+ MY +C ++
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
D+ VF + + V W S+ISG G E AL + +M K + FT+S +R C+
Sbjct: 320 DSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
LA E +Q H + ++GF D A +GL+D Y K G + AR VFD + +VIS N
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
+I Y +G G +A+++FE+M+ + PN VT L+VL AC+ S L E G E+F S +D
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD- 498
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
K+ HYACM++LLGR G L+EA ++ + + P +W LL+AC++H + + +
Sbjct: 499 KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERI 557
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYA 576
K+ +EPG + +++ N+Y+S+GK + +K L P SW+E+ K+ +
Sbjct: 558 TRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHT 617
Query: 577 FLCGDK-SHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGI 634
F+ GD SH +++I + ++ L+ + GY+E+ + D++E ++R L HSE L I
Sbjct: 618 FMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAI 677
Query: 635 AYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGD 694
A+ + + ++I + RVC +CH+ IK+++ V REI+ RD+ RFHHFR+G+CSCGD
Sbjct: 678 AFAVWRNVGGS-IRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGD 736
Query: 695 YW 696
YW
Sbjct: 737 YW 738
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 228/502 (45%), Gaps = 47/502 (9%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+ L+ C+ RSI G+K + +M+ +GF P ++++ ++CG + AR++F M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
ER V+W +LI+ L+ EA E + M T +++ +A + L L + +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 245 QIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+ H A+ G+ + FV AL+DMY K G +A+ V D++ EK V ++I GY+ +
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G EA+ + M + +++T + V+ C L + + K H +V+ GF S + +
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
T L+ Y + ++D+ VF + N +SW +LI+G +G+ E A+ F +M+R+ +
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK 365
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIF-----YSMSRDHKVKPRAMHYACMIELLGREGLL 478
PN T + L CS + E G +I Y RD + +I+L G+ G
Sbjct: 366 PNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAG------SGLIDLYGKCGCS 419
Query: 479 DEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLL 535
D A F + V M + A G L F G++P ++ +LL
Sbjct: 420 DMARLVFDTLSEVDVISLNTMIYSY--AQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 536 NMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVD 595
+S +L+E L RK ML YA C
Sbjct: 478 ACNNS--RLVEEGCELFDSFRKDKIMLTN--------DHYA--C---------------- 509
Query: 596 NLMDEISRHGYIEEHEMLLPDV 617
++D + R G +EE EML +V
Sbjct: 510 -MVDLLGRAGRLEEAEMLTTEV 530
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 172/460 (37%), Positives = 267/460 (58%), Gaps = 6/460 (1%)
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
G QIH G DS + L+D+YS C + DA VFD++P++ TV WN + S Y
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 303 RGYSEEALSIYLEMR---DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
+ + L ++ +M+ D K D T + ++ CA L +L+ KQ H + +G
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGA 251
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ + LV YS+ G M+ A VF M +NV+SW ALI+G +G G++AIE F +ML+
Sbjct: 252 LNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLK 311
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SRDHKVKPRAMHYACMIELLGREGLL 478
+ P T +LSACS+SGL G F M S + K+KP HY C+++LLGR LL
Sbjct: 312 FGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLL 371
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
D+A++LI+S ++P +W LL ACR+HG++ LG+ L ++ + YV+LLN Y
Sbjct: 372 DKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTY 431
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLM 598
S+ GK + + +K K + P CS IE++ + F+ D SH + +EIY+ + +
Sbjct: 432 STVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEIN 491
Query: 599 DEISRHGYIEEHEMLLPDVDEEEQR--ILKYHSEMLGIAYGLINTPDWTPLQITQGHRVC 656
++ GY+ E L +++ EE++ L+YHSE L IA+G++ TP T +++T+ R C
Sbjct: 492 QQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTC 551
Query: 657 GNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+CHN K ++ V R ++VRD SRFHHF+ G+CSC D+W
Sbjct: 552 VDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 127/260 (48%), Gaps = 8/260 (3%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRG 141
+ P+ S + I +L E LF L S+ AL C+ + G
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL-KCCIKSGDLLG 131
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
++ G + S+GF D +M ++ ++ C DA K+F ++P+RD VSW L S +
Sbjct: 132 GLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLR 191
Query: 202 SGNYAEAFEQFLCMWEEFN-----DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG 256
+ + F M + + DG + A ++A A LG ++ G+Q+H + G+
Sbjct: 192 NKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLA--LQACANLGALDFGKQVHDFIDENGLS 249
Query: 257 EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM 316
++ L+ MYS+CGS++ A VF M E++ V W ++ISG A+ G+ +EA+ + EM
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 317 RDSGAKIDQFTISIVIRICA 336
G ++ T++ ++ C+
Sbjct: 310 LKFGISPEEQTLTGLLSACS 329
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 101 RYKEAMDLFEILELEGDG-ADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
R ++ + LF+ ++ + DG G T + C L ++ K+V ++ NG L
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
+ N ++ M+ RCG M A ++F M ER+ VSW LISGL +G EA E F M +
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 220 NDGRSRTFATMVRASAGLGLIEVG 243
+T ++ A + GL+ G
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEG 337
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 308/556 (55%), Gaps = 29/556 (5%)
Query: 72 KVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKE-----AMDLFEILELEGDGADVGGSTY 126
K ++DA ++ ++ L Q + +E A+ LF L G G D +
Sbjct: 328 KCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD--EISL 385
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
+ C ++ + +++G I + D+ + N + M+ +C + +A ++F +M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
RDAVSW +I+ +G E F+ M + TF ++++A G G + G +I
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEI 504
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-------------- 292
HS +K G+ +S V C+LIDMYSKCG IE+A+ + + +++ V
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 293 ------WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQ 346
WNSIISGY ++ SE+A ++ M + G D+FT + V+ CA LAS KQ
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 347 AHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQ 406
HA +++ SD+ + LVD YSK G + D+R +F++ LR++ ++WNA+I GY +HG+
Sbjct: 625 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 684
Query: 407 GEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYA 466
GE+AI++FE+M+ E + PNHVTF+++L AC++ GL ++G E FY M RD+ + P+ HY+
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744
Query: 467 CMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV-LGKFAAEKLYGMEP 525
M+++LG+ G + A LIR P E +W LL C +H N V + + A L ++P
Sbjct: 745 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 804
Query: 526 GKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHT 585
S+Y +L N+Y+ +G + + + + ++ L P CSW+E+K + + FL GDK+H
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 586 QTKEIYQKVDNLMDEI 601
+ +EIY+++ + E+
Sbjct: 865 RWEEIYEELGLIYSEM 880
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 199/366 (54%), Gaps = 4/366 (1%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
+G + G T+ ++ VC L ++ G ++ G + D+ + +L M+ + ++
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRT-FATMVRASA 235
+ ++F +PE+++VSW +I+G V + + A + F M ++ N G S++ +A+++R+ A
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASVLRSCA 292
Query: 236 GLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNS 295
L + +G Q+H+ ALK D V A +DMY+KC +++DAQ +FD + +N+
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 296 IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
+I+GY+ + +AL ++ + SG D+ ++S V R CA + L Q + ++
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFE 415
D+ +D Y K + +A VFD M R++ +SWNA+IA + +G+G + + +F
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 416 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
MLR R+ P+ TF ++L AC+ L G EI S+ + ++ +I++ +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLG-YGMEIHSSIVKSGMASNSSVG-CSLIDMYSKC 530
Query: 476 GLLDEA 481
G+++EA
Sbjct: 531 GMIEEA 536
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 177/357 (49%), Gaps = 12/357 (3%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D+ N++++ + + M A F MP RD VSW +++SG + +G ++ E F+ M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
E + RTFA +++ + L +G QIH ++ G D A AL+DMY+K
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
++ VF +PEK++V W++II+G AL + EM+ A + Q + V+R CA
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
L+ L Q HA ++ F +D + T +D Y+K M+DA+ +FD N S+NA
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY-SGLSE----RGWEIFYS 451
+I GY G +A+ +F +++ + + ++ V AC+ GLSE G I S
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
+S D V A I++ G+ L EAF + + W A++ A +G
Sbjct: 413 LSLDVCVANAA------IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 462
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 33/267 (12%)
Query: 208 AFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALID 267
+F F + N + F+ + + A G +E+G+Q H+ + G +FV L+
Sbjct: 32 SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQ 91
Query: 268 MYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA-------------------------- 301
+Y+ A VFD+MP + V WN +I+GY+
Sbjct: 92 VYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSM 151
Query: 302 LRGY-----SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
L GY S +++ ++++M G + D T +I++++C+ L Q H +VR G
Sbjct: 152 LSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGC 211
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
+D+VA + L+D Y+K R ++ VF + KN +SW+A+IAG + A++ F++
Sbjct: 212 DTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSE 443
M + + + +VL +C + LSE
Sbjct: 272 MQKVNAGVSQSIYASVLRSC--AALSE 296
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/507 (34%), Positives = 281/507 (55%), Gaps = 40/507 (7%)
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYS--------------- 270
T +V+A GL + E G Q+H ++RG D V LI +Y+
Sbjct: 110 TVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSI 169
Query: 271 ----------------KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYL 314
+CG + A+ +F+ MPE+ + WN++ISGYA G S EAL+++
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
M+ G K++ + V+ C +L +L+ + AH+ + R+ + T LVD Y+K G
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
ME A VF M KNV +W++ + G +G GE+ +E+F M ++ V PN VTF++VL
Sbjct: 290 DMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLR 349
Query: 435 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK 494
CS G + G F SM + ++P+ HY C+++L R G L++A ++I+ P++P
Sbjct: 350 GCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA 409
Query: 495 NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+W +LL A RM+ NL LG A++K+ +E +YV+L N+Y+ S + V +++
Sbjct: 410 AVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSM 469
Query: 555 KRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH----GYIEEH 610
K KG+ P CS +EV + + F GDKSH + Y ++D + +ISR GY +
Sbjct: 470 KSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK----YTQIDAVWKDISRRLRLAGYKADT 525
Query: 611 EMLLPDVDEEEQR-ILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMV 669
++ D+DEEE+ L HSE IA+G+++ + P++I + RVCG+CH +I+ +
Sbjct: 526 TPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKI 585
Query: 670 TGREIVVRDASRFHHFRNGTCSCGDYW 696
REI+VRD +RFHHF++G CSC +W
Sbjct: 586 FNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 172/382 (45%), Gaps = 36/382 (9%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
KP+ L S I +++ D + + G+ T + LV C GLR
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHV-------------------------------RC 171
+V G I GF+ D ++ ++ ++ RC
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARC 187
Query: 172 GLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV 231
G ++ ARKLF MPERD ++W +ISG G EA F M E +++
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
A LG ++ GR HS + + +A L+D+Y+KCG +E A VF M EK+
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 292 GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
W+S ++G A+ G+ E+ L ++ M+ G + T V+R C+ + ++ Q H
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDS 366
Query: 352 VRHGFGSDI-VANTG-LVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGE 408
+R+ FG + + + G LVD Y++ GR+EDA + +M ++ + W++L+ + E
Sbjct: 367 MRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLE 426
Query: 409 QAIEMFEQMLRERVIPNHVTFL 430
+ ++ML E NH ++
Sbjct: 427 LGVLASKKML-ELETANHGAYV 447
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 172/400 (43%), Gaps = 85/400 (21%)
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED------AQCVFDQMPEK 288
+G+ EV RQIH+ G +D L+ + K ++ D A + D+ +
Sbjct: 15 SGITFKEV-RQIHAKLYVDGTLKDDH----LVGHFVKAVALSDHKYLDYANQILDRSEKP 69
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGA--KIDQFTISIVIRICARLASLEHAKQ 346
+ NS+I + E++ Y + SG K D +T++ +++ C L E Q
Sbjct: 70 TLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQ 129
Query: 347 AHAALVRHGFGSDIVANTGLVDFYSKWGRMED---------------------------- 378
H +R GF +D TGL+ Y++ G ++
Sbjct: 130 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGD 189
Query: 379 ---ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
AR +F+ M ++ I+WNA+I+GY G+ +A+ +F M E V N V ++VLSA
Sbjct: 190 VVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSA 249
Query: 436 CSYSGLSERG-WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA------------- 481
C+ G ++G W +S +K+K +++L + G +++A
Sbjct: 250 CTQLGALDQGRWA--HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 482 ---------------------FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
F+L++ V P +V++L C + G + G+ + +
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 521 ---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+G+EP +L Y L+++Y+ +G+L +A +++ + K
Sbjct: 368 RNEFGIEP-QLEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 325 bits (832), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 179/507 (35%), Positives = 284/507 (56%), Gaps = 14/507 (2%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
+KEAM+LF + G D+ + +++ C L ++ +V Y I D Y+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACS--SILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ M+ +C + DARK+F D V + +I G G E E F D
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEAL----NIFRD 444
Query: 222 GRSR-------TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS 274
R R TF +++RASA L + + +QIH K G+ D F ALID+YS C
Sbjct: 445 MRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYC 504
Query: 275 IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRI 334
++D++ VFD+M K V WNS+ +GY + +EEAL+++LE++ S + D+FT + ++
Sbjct: 505 LKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTA 564
Query: 335 CARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISW 394
LAS++ ++ H L++ G + L+D Y+K G EDA FD ++V+ W
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
N++I+ Y NHG+G++A++M E+M+ E + PN++TF+ VLSACS++GL E G + F M R
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR 684
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGK 514
++P HY CM+ LLGR G L++A LI P +P +W +LL+ C GN+ L +
Sbjct: 685 -FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 515 FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP 574
AAE +P S+ ML N+Y+S G EA V + +K +G+ P SWI + K+
Sbjct: 744 HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEV 803
Query: 575 YAFLCGDKSHTQTKEIYQKVDNLMDEI 601
+ FL DKSH + +IY+ +D+L+ +I
Sbjct: 804 HIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 165/300 (55%), Gaps = 11/300 (3%)
Query: 145 VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGN 204
V G +I G E D Y+ N +++++ R G M+ ARK+F MPER+ VSW T++S G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 205 YAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGR------QIHSCALKRGVGE 257
Y E+ FL W D + ++ ++A +GL GR Q+ S +K G
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDR 181
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
D +V LID Y K G+I+ A+ VFD +PEKSTV W ++ISG G S +L ++ ++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+ D + +S V+ C+ L LE KQ HA ++R+G D L+D Y K GR+
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
A +F+ M KN+ISW L++GY + ++A+E+F M + + P+ ++L++C+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 167/316 (52%), Gaps = 7/316 (2%)
Query: 128 ALVNVCVGLRSIRGVKRVF---GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+ + C GL RG VF +++ +GF+ D+Y+ ++ +++ G + AR +F +
Sbjct: 151 SFIQACSGLDG-RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
PE+ V+W T+ISG V G + + F + E+ +T++ A + L +E G+
Sbjct: 210 PEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK 269
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
QIH+ L+ G+ D+ + LID Y KCG + A +F+ MP K+ + W +++SGY
Sbjct: 270 QIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNA 329
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+EA+ ++ M G K D + S ++ CA L +L Q HA ++ G+D
Sbjct: 330 LHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN 389
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY---GNHGQGEQAIEMFEQMLRER 421
L+D Y+K + DAR VFD +V+ +NA+I GY G + +A+ +F M
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 422 VIPNHVTFLAVLSACS 437
+ P+ +TF+++L A +
Sbjct: 450 IRPSLLTFVSLLRASA 465
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 165/333 (49%), Gaps = 21/333 (6%)
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
R FA +++ A L+ +H + G+ D++++ LI++YS+ G + A+ VF++
Sbjct: 45 REFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEK 104
Query: 285 MPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEH 343
MPE++ V W++++S G EE+L ++LE R +++ +S I+ C+ L
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 344 --AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
Q + LV+ GF D+ T L+DFY K G ++ AR VFD + K+ ++W +I+G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
G+ ++++F Q++ + V+P+ VLSACS E G +I + R + ++
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMD 283
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM--WVALLTACRMHG--NLVLGKFAA 517
A +I+ + G + A L P KN+ W LL+ + + + F +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGM---PNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
+G++P +MY+ S L A +
Sbjct: 341 MSKFGLKP----------DMYACSSILTSCASL 363
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 319 bits (817), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 191/609 (31%), Positives = 317/609 (52%), Gaps = 43/609 (7%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVR-------CGLMLDARKL 180
AL+ C S +K + G+++ D+++ +R+L + V L+ A +
Sbjct: 17 ALLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 181 FADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
F+ + + + LI ++AF + M + + TF +++AS+ + +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYS------------------------------ 270
VG Q HS ++ G D +V +L+ MY+
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 271 -KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
KCG +E+A+ +FD+MP ++ W+ +I+GYA E+A+ ++ M+ G ++ +
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
VI CA L +LE ++A+ +V+ +++ T LVD + + G +E A HVF+ +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
+ +SW+++I G HG +A+ F QM+ IP VTF AVLSACS+ GL E+G EI+
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIY 373
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
+M +DH ++PR HY C++++LGR G L EA I V+P + ALL AC+++ N
Sbjct: 374 ENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKN 433
Query: 510 LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+ + L ++P YV+L N+Y+ +G+ + + +K K + P S IE
Sbjct: 434 TEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIE 493
Query: 570 VKKQPYAFLCG-DKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQR-ILKY 627
+ + F G D+ H + +I +K + ++ +I GY DVDEEE+ +
Sbjct: 494 IDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHM 553
Query: 628 HSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRN 687
HSE L IAYG++ T T ++I + RVC +CH KLI+ V GRE++VRD +RFHHFRN
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 688 GTCSCGDYW 696
G CSC DYW
Sbjct: 614 GVCSCRDYW 622
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 156/349 (44%), Gaps = 38/349 (10%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ L+ + + ++ ++ GF+ D+Y+ N ++HM+ CG + A ++F M
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM 178
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQF-------LCMWEEFNDGRSRT----------- 226
RD VSW ++++G G A E F L W +G ++
Sbjct: 179 GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFE 238
Query: 227 -------------FATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG 273
+++ + A LG +E G + + +K + + + AL+DM+ +CG
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 274 SIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIR 333
IE A VF+ +PE ++ W+SII G A+ G++ +A+ + +M G T + V+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 334 ICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNV 391
C+ +E + + + + HG + +VD + G++ +A + +M ++ N
Sbjct: 359 ACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNA 418
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS---ACS 437
AL+ + E A + ++ +V P H + +LS AC+
Sbjct: 419 PILGALLGACKIYKNTEVAERVGNMLI--KVKPEHSGYYVLLSNIYACA 465
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I A N +++A+DLFE ++ EG A+ + ++++ C L ++ +R + Y++ +
Sbjct: 221 INGYAKNNCFEKAIDLFEFMKREGVVAN--ETVMVSVISSCAHLGALEFGERAYEYVVKS 278
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
+L + ++ M RCG + A +F +PE D++SW ++I GL G+ +A F
Sbjct: 279 HMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYF 338
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALK-RGVGEDSFVACALIDMYSK 271
M R TF ++ A + GL+E G +I+ K G+ ++DM +
Sbjct: 339 SQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGR 398
Query: 272 CGSIEDAQCVFDQMPEK 288
G + +A+ +M K
Sbjct: 399 AGKLAEAENFILKMHVK 415
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 307/560 (54%), Gaps = 10/560 (1%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
K G VE + V A++ + +T + + A R +EA+ +F + E +
Sbjct: 165 KAGLVEDGLKVF--AYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY 222
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+ A+++ + +++ I NG + + N ++ M+ +C + +A K+F
Sbjct: 223 VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS 282
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
+R++++W +++G +G EA + F M+ T ++ A + + +E G+
Sbjct: 283 GDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK 342
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q+HS LK G F AL+DMY+K G + DA+ FD + E+ W S+ISGY
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+EEAL +Y M+ +G + T++ V++ C+ LA+LE KQ H ++HGFG ++ +
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L YSK G +ED VF R K+V+SWNA+I+G ++GQG++A+E+FE+ML E + P
Sbjct: 463 ALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEP 522
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+ VTF+ ++SACS+ G ERGW F MS + P+ HYACM++LL R G L EA
Sbjct: 523 DDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
I SA ++ +W LL+AC+ HG LG +A EKL + + S+YV L +Y++ G++
Sbjct: 583 IESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRM 642
Query: 545 MEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRH 604
+ V K ++ G++ CSWIE+K Q + F+ GD H +E +L+ +SR
Sbjct: 643 RDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEE----TKDLVCLVSRQ 698
Query: 605 GYIEEHEMLLPD---VDEEE 621
IEE + + D V+EEE
Sbjct: 699 -MIEEGFVTVLDSSFVEEEE 717
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 163/311 (52%), Gaps = 15/311 (4%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
R++ + V G +I G + N +++ + +CG + A +F + +D VSW +LI
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLI 87
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSR-------TFATMVRASAGLGLIEVGRQIHSC 249
+G +G + ++ + + F + R++ T A + +A + L VGRQ H+
Sbjct: 88 TGYSQNGGISSSYT----VMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHAL 143
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
+K D +V +L+ MY K G +ED VF MPE++T W++++SGYA RG EEA
Sbjct: 144 VVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEA 203
Query: 310 LSI---YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGL 366
+ + +L ++ G+ D + + V+ A + +Q H +++G + + L
Sbjct: 204 IKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNAL 262
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
V YSK + +A +FD +N I+W+A++ GY +G+ +A+++F +M + P+
Sbjct: 263 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 427 VTFLAVLSACS 437
T + VL+ACS
Sbjct: 323 YTIVGVLNACS 333
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 275/491 (56%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+T +++VC K + I +G++ ++ + N+++ + +CG + R +F
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDG 215
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
M R+ ++ +ISGL+++ + + F M S T+ + + A +G I G
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+QIH+ K G+ + + AL+DMYSKCGSIEDA +F+ E V I+ G A
Sbjct: 276 QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQN 335
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G EEA+ ++ M +G +ID +S V+ + SL KQ H+ +++ F + N
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN 395
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
GL++ YSK G + D++ VF RM ++N +SWN++IA + HG G A++++E+M V
Sbjct: 396 NGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVK 455
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
P VTFL++L ACS+ GL ++G E+ M H ++PR HY C+I++LGR GLL EA +
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
I S P++P +W ALL AC HG+ +G++AAE+L+ P S+++++ N+YSS GK
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISR 603
E A +K +K G+T S IE++ + ++F+ DK H Q + IY + L +
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVD 635
Query: 604 HGYIEEHEMLL 614
GY + +L
Sbjct: 636 EGYRPDKRFIL 646
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 186/446 (41%), Gaps = 47/446 (10%)
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
L + N +L ++ +CG ++DA KLF +MP RD +S + G + + E F+ +
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRN---RETESGFVLLKR 146
Query: 218 EFNDG--RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
G T ++ V + IH+ A+ G ++ V LI Y KCG
Sbjct: 147 MLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 276 EDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
+ VFD M ++ + ++ISG E+ L ++ MR + T + C
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+ + +Q HA L ++G S++ + L+D YSK G +EDA +F+ + +S
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC------------------- 436
++ G +G E+AI+ F +ML+ V + AVL
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKR 386
Query: 437 SYSG--LSERGWEIFYSMSRD---------HKVKPRAMHYACMIELLGREGLLDEAFAL- 484
+SG G YS D K + + MI R G A L
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 485 --IRSAPVEPTKNMWVALLTACRMHGNLVLGK---FAAEKLYGMEPGKLSSYVMLLNMYS 539
+ + V+PT +++LL AC G + G+ ++++G+EP + Y +++M
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP-RTEHYTCIIDMLG 505
Query: 540 SSGKLMEAAGVLKTLKRKGLTMLPTC 565
+G L EA + +L K P C
Sbjct: 506 RAGLLKEAKSFIDSLPLK-----PDC 526
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/650 (31%), Positives = 329/650 (50%), Gaps = 80/650 (12%)
Query: 87 SGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVF 146
SG C K+ EA +LF E++ DG T +++ +C L + +++
Sbjct: 98 SGYCKSGSKV-------EAFNLF--WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIH 148
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP-ERDAVSWMTLISGLVDSGNY 205
G+ I GF+ D+ ++N +L M+ +C + +A LF M E++ V+W ++++G +G
Sbjct: 149 GHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFA 208
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACAL 265
+A E F + E N TF +++ A A + VG Q+H C +K G + +V AL
Sbjct: 209 FKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL 268
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
IDMY+KC +E A+ + + M V WNS+I G +G EALS++ M + KID
Sbjct: 269 IDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 326 FTISIVIRICARLASLEH--AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
FTI ++ C L+ E A AH +V+ G+ + + N LVD Y+K G M+ A VF
Sbjct: 329 FTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVF 387
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
+ M+ K+VISW AL+ G ++G ++A+++F M + P+ + +VLSA + L E
Sbjct: 388 EGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLE 447
Query: 444 RGWEIF---------YSMS---------------RDHKVKPRAMH------YACMIELLG 473
G ++ S+S D V +M + C+I
Sbjct: 448 FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYA 507
Query: 474 REGLLDEA-------------------FA-----------------LIRSAPVEPTKNMW 497
+ GLL++A +A L+ VEP +W
Sbjct: 508 KNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVW 567
Query: 498 VALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
A+L A R HGN+ G+ AA+ L +EP YV L NMYS++G+ EAA V + +K +
Sbjct: 568 KAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSR 627
Query: 558 GLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV 617
++ P CSW+E K + ++F+ D+ H + EIY KVD +M I GY + L D+
Sbjct: 628 NISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDL 687
Query: 618 DEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLI 666
D+E + + L YHSE L +A+GL+ P P++I + RVCG+CH+A+KL+
Sbjct: 688 DKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 190/386 (49%), Gaps = 10/386 (2%)
Query: 155 EPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLC 214
E D + N ++ + + DA KLF P ++ +SW LISG SG+ EAF F
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLF-- 113
Query: 215 MWEEFNDG---RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
WE +DG T +++R L L+ G QIH +K G D V L+ MY++
Sbjct: 114 -WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172
Query: 272 CGSIEDAQCVFDQMP-EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
C I +A+ +F+ M EK+ V W S+++GY+ G++ +A+ + ++R G + +Q+T
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPS 232
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
V+ CA +++ Q H +V+ GF ++I + L+D Y+K ME AR + + M +
Sbjct: 233 VLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDD 292
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 450
V+SWN++I G G +A+ MF +M + + T ++L+ + S + +
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352
Query: 451 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
+ + ++++ + G++D A + +E W AL+T +G+
Sbjct: 353 CLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGSY 411
Query: 511 --VLGKFAAEKLYGMEPGKLSSYVML 534
L F ++ G+ P K+ + +L
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVL 437
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 137/272 (50%), Gaps = 7/272 (2%)
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
G ++ RQ+ +R D F +I YS + DA+ +F P K+T+ WN++I
Sbjct: 42 GRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALI 97
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
SGY G EA +++ EM+ G K +++T+ V+R+C L L +Q H ++ GF
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRML-RKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
D+ GL+ Y++ R+ +A ++F+ M KN ++W +++ GY +G +AIE F
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 476
+ RE N TF +VL+AC+ G ++ + + K + +I++ +
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCR 276
Query: 477 LLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
++ A AL+ V+ + W +++ C G
Sbjct: 277 EMESARALLEGMEVDDVVS-WNSMIVGCVRQG 307
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
SK GR+++AR +FD+M ++ +WN +I Y N + A E++ R + N +++
Sbjct: 39 SKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDA----EKLFRSNPVKNTISWN 94
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
A++S SG + +F+ M D +KP
Sbjct: 95 ALISGYCKSGSKVEAFNLFWEMQSD-GIKP 123
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 316 bits (809), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 299/580 (51%), Gaps = 18/580 (3%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVR--CGLMLDARKLFADMPE 186
+V + G S++ ++++ ++I NG + + N +L G + A+ LF
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 187 RDAVS-WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIE 241
+ S W LI G N + L SR TF +++ + I
Sbjct: 68 DPSTSDWNYLIRGF---SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+IH ++ G +D+ VA +L+ YS GS+E A VFD+MP + V WN +I ++
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
G +ALS+Y M + G D +T+ ++ CA +++L H S +
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+ L+D Y+K G +E+A VF+ M +++V++WN++I GYG HG G +AI F +M+
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V PN +TFL +L CS+ GL + G E F MS + P HY CM++L GR G L+ +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+I ++ +W LL +C++H NL LG+ A +KL +E YV++ ++YS++
Sbjct: 365 LEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAA 424
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
A + K ++ L +P SWIE+ Q + F+ DK H ++ IY ++ +++
Sbjct: 425 NDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRA 484
Query: 602 SRHGY-IEEHEMLLPDVDEEEQRIL----KYHSEMLGIAYGLINTPDWTPLQITQGHRVC 656
GY E+ P + + R L HSE L IAYGL+ T T L+IT+ RVC
Sbjct: 485 ILAGYKPEDSNRTAPTLSD---RCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVC 541
Query: 657 GNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+CH+ K ++ REI+VRD RFHHF +G CSC DYW
Sbjct: 542 RDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 5/298 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T++ + C ++SI + G +I +GF D + ++ + G + A K+F +M
Sbjct: 109 TFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEM 168
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RD VSW +I G + +A + M E G S T ++ + A + + +G
Sbjct: 169 PVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+H A FV+ ALIDMY+KCGS+E+A VF+ M ++ + WNS+I GY + G
Sbjct: 229 MLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+ EA+S + +M SG + + T ++ C+ ++ + + + V +
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHY 348
Query: 365 G-LVDFYSKWGRMEDA-RHVFDRMLRKNVISWNALIAGYGNHGQ---GEQAIEMFEQM 417
G +VD Y + G++E++ ++ ++ + W L+ H GE A++ Q+
Sbjct: 349 GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL 406
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 293/520 (56%), Gaps = 12/520 (2%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA DLF+ + L G +D G+ + + C + + K+V + G + DL+ +
Sbjct: 512 EAFDLFKRMNLCGIVSD--GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ M+ +CG++ DARK+F+ +PE VS LI+G N EA F M +
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPS 628
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDAQCVF 282
TFAT+V A + +G Q H KRG E ++ +L+ MY + +A +F
Sbjct: 629 EITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF 688
Query: 283 DQMPE-KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
++ KS V W ++SG++ G+ EEAL Y EMR G DQ T V+R+C+ L+SL
Sbjct: 689 SELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSL 748
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-NVISWNALIAG 400
+ H+ + D + + L+D Y+K G M+ + VFD M R+ NV+SWN+LI G
Sbjct: 749 REGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
Y +G E A+++F+ M + ++P+ +TFL VL+ACS++G G +IF M + ++
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEA 868
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
R H ACM++LLGR G L EA I + ++P +W +LL ACR+HG+ + G+ +AEKL
Sbjct: 869 RVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKL 928
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
+EP S+YV+L N+Y+S G +A + K ++ +G+ +P SWI+V+++ + F G
Sbjct: 929 IELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAG 988
Query: 581 DKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE 620
DKSH++ +I +++L D +++ ++ PD+ E+
Sbjct: 989 DKSHSEIGKIEMFLEDLYD------LMKDDAVVNPDIVEQ 1022
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 178/351 (50%), Gaps = 13/351 (3%)
Query: 145 VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGN 204
VF M G PD V++ ++R G + DAR LF +M D V+W +ISG G
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
A E F M + T +++ A + +++G +H+ A+K G+ + +V +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKID 324
L+ MYSKC +E A VF+ + EK+ V WN++I GYA G S + + ++++M+ SG ID
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 325 QFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD 384
FT + ++ CA LE Q H+ +++ ++ LVD Y+K G +EDAR +F+
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 385 RMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS-----YS 439
RM ++ ++WN +I Y +A ++F++M ++ + + L AC+ Y
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHY-ACMIELLGREGLLDEAFALIRSAP 489
G + + RD +H + +I++ + G++ +A + S P
Sbjct: 548 GKQVHCLSVKCGLDRD-------LHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 214/446 (47%), Gaps = 41/446 (9%)
Query: 150 ISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF 209
I G ++Y+ + ++ M+ +C M A K+F + E++ V W +I G +G +
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVM 413
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
E F+ M + TF +++ A +E+G Q HS +K+ + ++ FV AL+DMY
Sbjct: 414 ELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
+KCG++EDA+ +F++M ++ V WN+II Y EA ++ M G D ++
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLA 533
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
++ C + L KQ H V+ G D+ + L+D YSK G ++DAR VF +
Sbjct: 534 STLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEW 593
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC------------- 436
+V+S NALIAGY + E+A+ +F++ML V P+ +TF ++ AC
Sbjct: 594 SVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFH 652
Query: 437 ---SYSGLSERGWEIFYSMSRDHKVKPRAMHYAC-----------------MIELLGREG 476
+ G S G + S+ + + R M AC M+ + G
Sbjct: 653 GQITKRGFSSEGEYLGISLLGMY-MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 477 LLDEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM--EPGKLSSY 531
+EA +R V P + +V +L C + +L G+ ++ + + +L+S
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRK 557
L++MY+ G + ++ V ++R+
Sbjct: 772 T-LIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
G + + + N ++ ++ +C + A K F D E+D +W +++S G + F
Sbjct: 90 GIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSF 148
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
+ ++E TF+ ++ A +E GRQIH +K G+ +S+ AL+DMY+KC
Sbjct: 149 VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKC 208
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
I DA+ VF+ + + +TV W + SGY G EEA+ ++ MRD G + D VI
Sbjct: 209 DRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI 268
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
NT Y + G+++DAR +F M +V+
Sbjct: 269 ------------------------------NT-----YIRLGKLKDARLLFGEMSSPDVV 293
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+WN +I+G+G G AIE F M + V T +VLSA
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 277/502 (55%), Gaps = 8/502 (1%)
Query: 105 AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRV 164
A+DLF + + D T +++ C L K V + + + + +
Sbjct: 357 ALDLFGFMRQKSVLPD--SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL 414
Query: 165 LHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR- 223
L ++ +CG DA +F M E+D V+W +LISGL +G + EA + F M ++ + +
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 474
Query: 224 -SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
S ++ A AGL + G Q+H +K G+ + FV +LID+YSKCG E A VF
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF 534
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
M ++ V WNS+IS Y+ E ++ ++ M G D +I+ V+ + ASL
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
K H +R G SD L+D Y K G + A ++F +M K++I+WN +I GYG
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
+HG A+ +F++M + P+ VTFL+++SAC++SG E G IF M +D+ ++P
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 463 MHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYG 522
HYA M++LLGR GLL+EA++ I++ P+E ++W+ LL+A R H N+ LG +AEKL
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLR 774
Query: 523 MEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK 582
MEP + S+YV L+N+Y +G EAA +L +K KGL P CSWIEV + F G
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 583 SHTQTKEIYQKVD----NLMDE 600
S EI+ ++ N++DE
Sbjct: 835 SSPMKAEIFNVLNRLKSNMVDE 856
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 235/551 (42%), Gaps = 92/551 (16%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER-DAVSWMTLISGLVD 201
K++ G+M+ N + D ++ ++ M+ + GL +DA ++F ++ ++ + V W +I G
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
SG + + ++ S +F + A + GRQIH +K G+ D +V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
+L+ MYSKCG + +A+ VF + +K WN++++ YA Y AL ++ MR
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
D FT+S VI C+ L + K HA L + S + L+ YSK G DA
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML--RERVIPNHVTFLAVLSACS-- 437
VF M K++++W +LI+G +G+ ++A+++F M + + P+ +V +AC+
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 438 -------------------------------YS--GLSERGWEIFYSMSRDHKVKPRAMH 464
YS GL E ++F SMS ++ V
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA----- 544
Query: 465 YACMIELLGREGLLD---EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG-------- 513
+ MI R L + + F L+ S + P ++L A +L+ G
Sbjct: 545 WNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 514 ------------------------KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAG 549
K+A M+ L ++ +++ Y S G + A
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 550 VLKTLKRKG--------LTMLPTCS---WIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLM 598
+ +K+ G L+++ C+ ++E K + F+ D E Y N++
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYA---NMV 721
Query: 599 DEISRHGYIEE 609
D + R G +EE
Sbjct: 722 DLLGRAGLLEE 732
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/471 (25%), Positives = 225/471 (47%), Gaps = 32/471 (6%)
Query: 68 HVERKVPVLEDAHVMKPS-TSGLCSQIEKLALCNRYKEAMDLFEILELEGDGAD---VGG 123
H+ R + + D+++ S SG+ + I+K Y +A+ L+ + DG+
Sbjct: 9 HIRRGLCCVADSYISPASINSGIRALIQK----GEYLQALHLYS----KHDGSSPFWTSV 60
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF-- 181
T+ +L+ C L ++ K + G ++ G+ D ++ +++M+V+CG + A ++F
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 182 -----ADMPERDAVSWMTLISGLVDSGNYAEAFEQF--LCMWEEFNDGRSRTFATMVRAS 234
+ + RD W ++I G + E F + ++ D S + V
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-W 293
G E G+QIH L+ + DSF+ ALIDMY K G DA VF ++ +KS V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR 353
N +I G+ G E +L +Y+ +++ K+ + + + C++ + +Q H +V+
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEM 413
G +D T L+ YSK G + +A VF ++ K + WNA++A Y + G A+++
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
F M ++ V+P+ T V+S CS GL G + + + ++ + + ++ L
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLYS 419
Query: 474 REGLLDEAFALIRSAPVEPTKNMWVALLTA-CRMHGNLVLGKFA-AEKLYG 522
+ G +A+ + +S E W +L++ C+ GKF A K++G
Sbjct: 420 KCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKN------GKFKEALKVFG 463
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/639 (27%), Positives = 327/639 (51%), Gaps = 44/639 (6%)
Query: 65 KIGHVERKVPVLEDAHV--MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVG 122
K+G+V+ + +L++ + +KP S + A K+A+ + + +++ G
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST- 225
Query: 123 GSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA 182
S+ +L+ ++ K + GY++ N D+Y+ ++ M+++ G + AR +F
Sbjct: 226 -SSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD 284
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV 242
M ++ V+W +L+SGL + C+ ++ A M+R
Sbjct: 285 MMDAKNIVAWNSLVSGL-----------SYACLLKDAE-------ALMIRME-------- 318
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIIS 298
K G+ D+ +L Y+ G E A V +M EK + V W +I S
Sbjct: 319 ---------KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
G + G AL ++++M++ G + T+S +++I L+ L K+ H +R
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLIC 429
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
D T LVD Y K G ++ A +F + K++ SWN ++ GY G+GE+ I F ML
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
+ P+ +TF +VLS C SGL + GW+ F M + + P H +CM++LLGR G L
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
DEA+ I++ ++P +W A L++C++H +L L + A ++L +EP ++Y+M++N+Y
Sbjct: 550 DEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLY 609
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLM 598
S+ + + + ++ + + SWI++ + + F K+H +IY ++ L+
Sbjct: 610 SNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLV 669
Query: 599 DEISRHGYIEEHEMLLPDV-DEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCG 657
E+ + GY+ + + D+ D E++++L H+E L + YGLI P+++ + +C
Sbjct: 670 SEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICS 729
Query: 658 NCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+ H K ++++ REIV+++ +R HHFR+G CSC D W
Sbjct: 730 DSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/553 (24%), Positives = 248/553 (44%), Gaps = 98/553 (17%)
Query: 145 VFGYMISNGFE-PDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+ G +I G + D +++ + + RC + A KLF +MP+RD ++W ++ + SG
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVR----ASAGLGLIEVGRQIHSCALKRGVGEDS 259
N+ +A E F M +F+ ++ +TMV+ S G E GRQIH L+ G+ +
Sbjct: 69 NWEKAVELFREM--QFSGAKAYD-STMVKLLQVCSNKEGFAE-GRQIHGYVLRLGLESNV 124
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKS------------------------------ 289
+ +LI MYS+ G +E ++ VF+ M +++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 290 -----TVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
V WNS++SGYA +G S++A+++ M+ +G K +IS +++ A L+
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALI------ 398
K H ++R+ D+ T L+D Y K G + AR VFD M KN+++WN+L+
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 399 -----------------------------AGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
+GY G+ E+A+++ +M + V PN V++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 430 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE-----AFAL 484
A+ S CS +G ++F M ++ V P A + ++++LG LL F L
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKM-QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 485 IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
++ + + AL+ G+L + A E +G++ L+S+ +L Y+ G+
Sbjct: 424 RKNLICDAY--VATALVDMYGKSGDL---QSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 545 MEAAGVLKTLKRKGL--------TMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
E + G+ ++L C + ++ + + +S +
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 597 LMDEISRHGYIEE 609
++D + R GY++E
Sbjct: 539 MVDLLGRSGYLDE 551
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 127/238 (53%), Gaps = 2/238 (0%)
Query: 242 VGRQIHSCALKRGV-GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+G IH +KRG+ D+ V A + Y +C S+ A +FD+MP++ + WN I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G E+A+ ++ EM+ SGAK T+ ++++C+ +Q H ++R G S++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
L+ YS+ G++E +R VF+ M +N+ SWN++++ Y G + AI + ++M
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
+ P+ VT+ ++LS + GLS+ + M + +KP + +++ + G L
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL 241
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 162/475 (34%), Positives = 266/475 (56%), Gaps = 3/475 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ L+ LR + +++ G + D ++ N ++ + GL A +LF
Sbjct: 106 TFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA 164
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
++D V+W +I G V +G+ +EA F+ M + T ++++A+ + + GR
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGR 224
Query: 245 QIHSCALKRG-VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+H L+ G V D F+ +L+DMY KC +DAQ VFD+MP ++ V W ++I+GY
Sbjct: 225 SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
++ + ++ EM S ++ T+S V+ CA + +L ++ H ++++ + A
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAG 344
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
T L+D Y K G +E+A VF+R+ KNV +W A+I G+ HG A ++F ML V
Sbjct: 345 TTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
PN VTF+AVLSAC++ GL E G +F SM ++P+A HYACM++L GR+GLL+EA A
Sbjct: 405 PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
LI P+EPT +W AL +C +H + LGK+AA ++ ++P Y +L N+YS S
Sbjct: 465 LIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQN 524
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLC-GDKSHTQTKEIYQKVDNL 597
E A V K +K + + P SWIEVK + F+ DK ++ ++Y+ +D +
Sbjct: 525 WDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 279/529 (52%), Gaps = 4/529 (0%)
Query: 64 KKIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGG 123
K++G +++ V + T + I L RYKE + F + + +D
Sbjct: 154 KRVGKIDKSCRVFSEMPFRNAVT--WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDT-- 209
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
T+ + C GLR ++ K + ++I GF L + N + M+ CG M D LF +
Sbjct: 210 YTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFEN 269
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
M ERD VSW +LI G +A E F+ M +TFA+M A A L + G
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
Q+H L G+ + V+ +++ MYS CG++ A +F M + + W++II GY
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G+ EE + MR SG K F ++ ++ + +A +E +Q HA + G +
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR 449
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
+ L++ YSK G +++A +F R +++S A+I GY HG+ ++AI++FE+ L+
Sbjct: 450 SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFR 509
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
P+ VTF++VL+AC++SG + G+ F M + ++P HY CM++LL R G L +A
Sbjct: 510 PDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
+I + +W LL AC+ G++ G+ AAE++ ++P ++ V L N+YSS+G
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGN 629
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
L EAA V K +K KG+ P S I++K AF+ GD+ H Q+++IY
Sbjct: 630 LEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYN 678
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 227/505 (44%), Gaps = 41/505 (8%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I++ N EA+ LF + + S ++ C +I + + Y +
Sbjct: 76 SIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAV 135
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
+Y+ + +L M+ R G + + ++F++MP R+AV+W +I+GLV +G Y E
Sbjct: 136 KTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLT 195
Query: 211 QF--LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F + EE +D + TFA ++A AGL ++ G+ IH+ + RG VA +L M
Sbjct: 196 YFSEMSRSEELSD--TYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATM 253
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
Y++CG ++D C+F+ M E+ V W S+I Y G +A+ +++MR+S ++ T
Sbjct: 254 YTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ + CA L+ L +Q H ++ G + + ++ YS G + A +F M
Sbjct: 314 ASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRC 373
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
+++ISW+ +I GY G GE+ + F M + P ++LS + E G ++
Sbjct: 374 RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
Query: 449 F-----YSMSRDHKVKPR--AMHYAC-----------------------MIELLGREGLL 478
+ + ++ V+ M+ C MI G
Sbjct: 434 HALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKS 493
Query: 479 DEAFALIRSA---PVEPTKNMWVALLTACRMHGNLVLGKF---AAEKLYGMEPGKLSSYV 532
EA L + P ++++LTAC G L LG ++ Y M P K Y
Sbjct: 494 KEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAK-EHYG 552
Query: 533 MLLNMYSSSGKLMEAAGVLKTLKRK 557
++++ +G+L +A ++ + K
Sbjct: 553 CMVDLLCRAGRLSDAEKMINEMSWK 577
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 9/295 (3%)
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
F+P N L + G + AR++F MP D VSW ++I V + N EA F
Sbjct: 41 FDP-----NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFS 95
Query: 214 CM--WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
M + + + +++A I G +H+ A+K + +V +L+DMY +
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
G I+ + VF +MP ++ V W +II+G G +E L+ + EM S D +T +I
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
++ CA L +++ K H ++ GF + + L Y++ G M+D +F+ M ++V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
+SW +LI Y GQ +A+E F +M +V PN TF ++ SAC + LS W
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC--ASLSRLVW 328
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 315/637 (49%), Gaps = 71/637 (11%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR-VLHMHVRCGLMLD-ARKLFADMP 185
+L+N C +++R + ++ G I G + D Y + +LH + L AR+L P
Sbjct: 10 SLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE-FNDGRSRTFATMVRASAGLGLIEVGR 244
E DA + TL+ G +S + F+ M + F S +FA +++A + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS------ 298
Q+H ALK G+ FV LI MY CG +E A+ VFD+M + + V WN++I+
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 299 -------------------------GYALRGYSEEALSIYLEM--RD------------- 318
GY G E A I+ EM RD
Sbjct: 187 DVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAH 246
Query: 319 ----------------SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
+G ++ +++ V+ C++ S E K H + + G+ +
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKN-VISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
N L+D YS+ G + AR VF+ M K ++SW ++IAG HGQGE+A+ +F +M
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V P+ ++F+++L ACS++GL E G + F M R + ++P HY CM++L GR G L +A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+ I P+ PT +W LL AC HGN+ L + ++L ++P V+L N Y+++
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
GK + A + K++ + + S +EV K Y F G+K E ++K+ ++ +
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRL 546
Query: 602 SRH-GYIEEHEMLLPDVDEEEQR-ILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNC 659
GY E L DV+EEE+ + HSE L +A+ L ++I + R+C +C
Sbjct: 547 KDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDC 606
Query: 660 HNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
H +KL + V G EI+VRD +RFH F++G+CSC DYW
Sbjct: 607 HAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 177/559 (31%), Positives = 291/559 (52%), Gaps = 11/559 (1%)
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA----DMPERDAVSWMTLISGL 199
R F M+ G +PD VL + + G R L A + + D+ ++L+
Sbjct: 112 RHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMY 171
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE-D 258
+G AF+ F EE D R + + ++ G + L R + E +
Sbjct: 172 AKTGQLKHAFQVF----EESPD-RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN 226
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
S LI Y G + A+ +F+ MPEK+ V W ++I+G++ G E A+S Y EM +
Sbjct: 227 SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE 286
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G K +++TI+ V+ C++ +L + H ++ +G D T LVD Y+K G ++
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
A VF M K+++SW A+I G+ HG+ QAI+ F QM+ P+ V FLAVL+AC
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
S + G F SM D+ ++P HY +++LLGR G L+EA L+ + P+ P W
Sbjct: 407 SSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 499 ALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
AL AC+ H + ++ L ++P SY+ L ++S G + + +L+++
Sbjct: 467 ALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRI 526
Query: 559 LTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVD 618
S+IE+ Q F GD SH T+EI K+D ++ + GY + + D++
Sbjct: 527 KERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIE 586
Query: 619 EEE-QRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVR 677
EEE + + HSE L + G + T T ++I + R+CG+CH+ +K ++ ++ R+I++R
Sbjct: 587 EEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLR 646
Query: 678 DASRFHHFRNGTCSCGDYW 696
DA +FHHF++G CSCGDYW
Sbjct: 647 DARQFHHFKDGRCSCGDYW 665
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 4/179 (2%)
Query: 109 FEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMH 168
FE+LE G T A+++ C ++ R+ GY++ NG + D + ++ M+
Sbjct: 282 FEMLE---KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMY 338
Query: 169 VRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
+CG + A +F++M +D +SW +I G G + +A + F M F
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 229 TMVRASAGLGLIEVGRQ-IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP 286
++ A +++G S L + ++D+ + G + +A + + MP
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP 457
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 315/587 (53%), Gaps = 29/587 (4%)
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRC-----GLMLDARKLF 181
+ ++ CV S +K++ + ++ G ++ +R+L RC G + A ++F
Sbjct: 7 ETMIQKCV---SFSQIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIF 60
Query: 182 ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS------RTFATMVRASA 235
+P+ W +I G S + + AF + M ++ + + T + ++A A
Sbjct: 61 RYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA 120
Query: 236 GLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNS 295
Q+H +RG+ DS + L+D YSK G + A +FD+MP + WN+
Sbjct: 121 RALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNA 180
Query: 296 IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
+I+G + EA+ +Y M G + + T+ + C+ L ++ + + HG
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN-----IFHG 235
Query: 356 FGSD-IVANTGLVDFYSKWGRMEDARHVFDRML-RKNVISWNALIAGYGNHGQGEQAIEM 413
+ +D ++ + +D YSK G ++ A VF++ +K+V++WN +I G+ HG+ +A+E+
Sbjct: 236 YSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
F+++ + P+ V++LA L+AC ++GL E G +F +M+ V+ HY C+++LL
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMAC-KGVERNMKHYGCVVDLLS 354
Query: 474 REGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM 533
R G L EA +I S + P +W +LL A ++ ++ + + A+ ++ M +V+
Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVL 414
Query: 534 LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQK 593
L N+Y++ G+ + V ++ K + +P S+IE K + F DKSH Q +EIY+K
Sbjct: 415 LSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEK 474
Query: 594 VDNLMDEISRHGYIEEHEMLLPDVDEEE-QRILKYHSEMLGIAYGLI---NTPDWTPLQI 649
+D + +I GY+ + ++L D+ EEE + L YHSE L +AYGL+ + +P+++
Sbjct: 475 IDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRV 534
Query: 650 TQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
R+CG+CH K I+ + REI+VRD RFH F++G+CSC D+W
Sbjct: 535 INNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 309/573 (53%), Gaps = 23/573 (4%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRC---GLMLDARKLFADMPERDAVSWMTLISGL 199
K+V G + G +Y+ N V+ M+ RC +A +F + ++ V+W ++I+
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 200 VDSGNYAEAFEQFLCMWEE---FNDGRSRTFATMVRASAGLGLIEVGR---QIHSCALKR 253
+A F+ M + F+ + + S+ L EV + Q+HS +K
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 254 GVGEDSFVACALIDMYSK-CGSIEDAQCVFDQMPE-KSTVGWNSIISGYALRGYSEEALS 311
G+ + VA ALI +YS+ D +F +M + V WN II+ +A+ E A+
Sbjct: 297 GLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIH 355
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
++ ++R D +T S V++ CA L + HA HA +++ GF +D V N L+ Y+
Sbjct: 356 LFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYA 415
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
K G ++ VFD M ++V+SWN+++ Y HGQ + + +F++M + P+ TF+A
Sbjct: 416 KCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIA 472
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
+LSACS++G E G IF SM + P+ HYAC+I++L R EA +I+ P++
Sbjct: 473 LLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMD 532
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGM-EPGKLSSYVMLLNMYSSSGKLMEAAGV 550
P +W+ALL +CR HGN LGK AA+KL + EP SY+ + N+Y++ G EA
Sbjct: 533 PDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLS 592
Query: 551 LKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEE- 609
+K ++ + P SW E+ + + F G + + +Y+++ L+ + GY+ E
Sbjct: 593 IKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGYVPEM 652
Query: 610 -HEMLLPDVDEEEQRILKYHSEMLGIAYGLINTPDWTP-----LQITQGHRVCGNCHNAI 663
+ +E+E+ L +HSE L +A+ ++ + +QI + R+C +CHN +
Sbjct: 653 RSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFM 712
Query: 664 KLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
KL + + G+EI++RD++RFHHF++ +CSC DYW
Sbjct: 713 KLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+ A+ LF L E D T+ +++ C GL + R + +I GF D + N
Sbjct: 351 ERAIHLFGQLRQEKLSPD--WYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNN 408
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++H + +CG + ++F DM RD VSW +++ G F M + N
Sbjct: 409 SLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM--DINPD 466
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKR--GVGEDSFVACALIDMYSKCGSIEDAQC 280
S TF ++ A + G +E G +I ++ + + + AC +IDM S+ +A+
Sbjct: 467 -SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC-VIDMLSRAERFAEAEE 524
Query: 281 VFDQMP-EKSTVGWNSII 297
V QMP + V W +++
Sbjct: 525 VIKQMPMDPDAVVWIALL 542
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 247/434 (56%), Gaps = 5/434 (1%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-SGAKI 323
+I+ K G A+ V +++ + WN +I GY EEAL M + K
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
++F+ + + CARL L HAK H+ ++ G + + ++ LVD Y+K G + +R VF
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
+ R +V WNA+I G+ HG +AI +F +M E V P+ +TFL +L+ CS+ GL E
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
G E F MSR ++P+ HY M++LLGR G + EA+ LI S P+EP +W +LL++
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 504 CRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLP 563
R + N LG+ A + L + G YV+L N+YSS+ K A V + + ++G+
Sbjct: 344 SRTYKNPELGEIAIQNLSKAKSG---DYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 564 TCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE-Q 622
SW+E + F GD SH +TK IY+ ++ L+ + G++ + +++L DV EEE +
Sbjct: 401 GKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKE 460
Query: 623 RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRF 682
L YHSE L +AY ++ + T ++I + R+C +CHN IK ++ + R I++RD RF
Sbjct: 461 ENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRF 520
Query: 683 HHFRNGTCSCGDYW 696
H F +G CSC DYW
Sbjct: 521 HRFEDGLCSCRDYW 534
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 10/277 (3%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+R+ + +S P + +N ++ ++ G A+K+ + +++ ++W +I G V +
Sbjct: 85 RRLLLWFLS--LSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRN 142
Query: 203 GNYAEAFEQFLCMWEEFNDGRSR--TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
Y EA + M F D + +FA+ + A A LG + + +HS + G+ ++
Sbjct: 143 VQYEEALKALKNMLS-FTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAI 201
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
++ AL+D+Y+KCG I ++ VF + WN++I+G+A G + EA+ ++ EM
Sbjct: 202 LSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEH 261
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG-LVDFYSKWGRMEDA 379
D T ++ C+ LE K+ + R + + G +VD + GR+++A
Sbjct: 262 VSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEA 321
Query: 380 RHVFDRM-LRKNVISWNALIAG---YGNHGQGEQAIE 412
+ + M + +V+ W +L++ Y N GE AI+
Sbjct: 322 YELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQ 358
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 2/176 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
++ + + C L + K V MI +G E + + + ++ ++ +CG + +R++F +
Sbjct: 167 SFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSV 226
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
D W +I+G G EA F M E S TF ++ + GL+E G+
Sbjct: 227 KRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGK 286
Query: 245 QIHSCALKRGVGEDSFVAC-ALIDMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIIS 298
+ +R + A++D+ + G +++A + + MP E V W S++S
Sbjct: 287 EYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 304/594 (51%), Gaps = 15/594 (2%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R KEA+ F LE+ G TY A++++C +RS+ K++ I GFE +
Sbjct: 305 RAKEAVGTF--LEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 161 MNRVLHMHVRCGLM-LDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
N ++ M+++C ++A ++F M + VSW TLI GLVD G + F + M +
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
+ T + ++RA + L + +IH+ L+R V + V +L+D Y+ ++ A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 280 CVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
V M + + + S+++ + G E ALS+ M G ++DQ ++ I A L
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
+LE K H V+ GF LVD YSK G +EDA+ VF+ + +V+SWN L++
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
G ++G A+ FE+M + P+ VTFL +LSACS L++ G E F M + + ++
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIE 662
Query: 460 PRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK 519
P+ HY ++ +LGR G L+EA ++ + ++P ++ LL ACR GNL LG+ A K
Sbjct: 663 PQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
Query: 520 LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLC 579
+ P + Y++L ++Y SGK A + K L+ S +EV+ + ++F+
Sbjct: 723 GLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVS 782
Query: 580 GDKSHT-QTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRILKYHSEMLGIAYGL 638
D + +T IY +++++ +EI R G P E +HS + YG
Sbjct: 783 EDVTRVDKTNGIYAEIESIKEEIKRFGS--------PYRGNENA---SFHSAKQAVVYGF 831
Query: 639 INTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSC 692
I P+ + + +C +CH + ++ + ++I VRD ++ H F+NG CSC
Sbjct: 832 IYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 196/396 (49%), Gaps = 5/396 (1%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I + A+ LFE E+ G T+ ++V C GLR I RV G +I
Sbjct: 96 ISAFTKSQEFASALSLFE--EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT 153
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GFE + + + + ++ +CG +A +LF+ + D +SW +IS LV + + EA + +
Sbjct: 154 GFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFY 213
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
M + TF ++ AS+ LGL E G+ IHS + RG+ + + +L+D YS+
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQF 272
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
+EDA V + E+ W S++SG+ ++EA+ +LEMR G + + FT S ++
Sbjct: 273 SKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME-DARHVFDRMLRKNV 391
+C+ + SL+ KQ H+ ++ GF LVD Y K E +A VF M+ NV
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
+SW LI G +HG + + +M++ V PN VT VL ACS R EI
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
+ R H V + +++ +D A+ +IRS
Sbjct: 453 LLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRS 487
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 208/450 (46%), Gaps = 48/450 (10%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
+I G +L + N +L ++++ + +ARKLF +M R +W +IS S +A A
Sbjct: 49 VIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASA 108
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F M TF+++VR+ AGL I G ++H +K G +S V +L D+
Sbjct: 109 LSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDL 168
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
YSKCG ++A +F + T+ W +IS EAL Y EM +G ++FT
Sbjct: 169 YSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTF 228
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
++ + L LE K H+ ++ G ++V T LVDFYS++ +MEDA V +
Sbjct: 229 VKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS----------- 437
++V W ++++G+ + + ++A+ F +M + PN+ T+ A+LS CS
Sbjct: 288 QDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 438 YSGLSERGWE-------------------------IFYSMSRDHKVKPRAMHYACMIELL 472
+S + G+E +F +M V P + + +I L
Sbjct: 348 HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM-----VSPNVVSWTTLILGL 402
Query: 473 GREGLLDEAFALIRSA---PVEPTKNMWVALLTACRM--HGNLVLGKFAAEKLYGMEPGK 527
G + + F L+ VEP +L AC H VL + A L G+
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL-EIHAYLLRRHVDGE 461
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+ L++ Y+SS K+ A V++++KR+
Sbjct: 462 MVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 151/301 (50%), Gaps = 6/301 (1%)
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+G IH +K G+ E+ + L+ +Y K I +A+ +FD+M ++ W +IS +
Sbjct: 41 IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
ALS++ EM SG ++FT S V+R CA L + + + H ++++ GF + V
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+ L D YSK G+ ++A +F + + ISW +I+ + +A++ + +M++
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V PN TF+ +L A S+ GL E G I +S + + +++ + +++A
Sbjct: 221 VPPNEFTFVKLLGASSFLGL-EFGKTI-HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 482 FALIRSAPVEPTKNMWVALLTAC--RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
++ S+ E +W ++++ + +G F + G++P +Y +L++ S
Sbjct: 279 VRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF-TYSAILSLCS 336
Query: 540 S 540
+
Sbjct: 337 A 337
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 280/508 (55%), Gaps = 3/508 (0%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+E++ F E+ G T+ +L+ ++ K++ Y++ + D+++ +
Sbjct: 322 EESLTFF--YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ + +C + A+ +F+ D V + +ISG + +G Y ++ E F + +
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
T +++ L +++GR++H +K+G + CA+IDMY+KCG + A +F
Sbjct: 440 NEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIF 499
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+++ ++ V WNS+I+ A A+ I+ +M SG D +IS + CA L S
Sbjct: 500 ERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSES 559
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
K H +++H SD+ + + L+D Y+K G ++ A +VF M KN++SWN++IA G
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 403 NHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
NHG+ + ++ +F +M+ + I P+ +TFL ++S+C + G + G F SM+ D+ ++P+
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY 521
HYAC+++L GR G L EA+ ++S P P +W LL ACR+H N+ L + A+ KL
Sbjct: 680 QEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Query: 522 GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGD 581
++P YV++ N ++++ + V +K + + +P SWIE+ K+ + F+ GD
Sbjct: 740 DLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGD 799
Query: 582 KSHTQTKEIYQKVDNLMDEISRHGYIEE 609
+H ++ IY +++L+ E+ GYI +
Sbjct: 800 VNHPESSHIYSLLNSLLGELRLEGYIPQ 827
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 211/482 (43%), Gaps = 44/482 (9%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G ST+ LV CV L++ +G+ + + S G + + ++ + ++ ++ G +
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
KLF + ++D V W +++G G + F M + + TF ++ A
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASK 252
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
LI++G Q+H + GV + + +L+ MYSKCG +DA +F M TV WN +I
Sbjct: 253 LLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMI 312
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
SGY G EE+L+ + EM SG D T S ++ ++ +LE+ KQ H ++RH
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
DI + L+D Y K + A+++F + +V+ + A+I+GY ++G ++EMF +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 418 LRERVIPNHVTFLAVLSACSY----------------SGLSER----------------- 444
++ ++ PN +T +++L G R
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 445 --GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT 502
+EIF +S+ V +M C + A + R V V++
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRC-----AQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 503 ACRMHGNLVLGKFAAEKLYGMEPGKLSSYV----MLLNMYSSSGKLMEAAGVLKTLKRKG 558
A NL F M L+S V L++MY+ G L A V KT+K K
Sbjct: 548 ALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKN 607
Query: 559 LT 560
+
Sbjct: 608 IV 609
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 2/311 (0%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF--ADMPE 186
L+ C +R K+V ++I N D Y R+L M+ CG D K+F D+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
W ++IS V +G +A + M TF +V+A L + +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYS 306
G+ + FVA +LI Y + G I+ +FD++ +K V WN +++GYA G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 307 EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGL 366
+ + + MR + T V+ +CA ++ Q H +V G + L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
+ YSK GR +DA +F M R + ++WN +I+GY G E+++ F +M+ V+P+
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 427 VTFLAVLSACS 437
+TF ++L + S
Sbjct: 341 ITFSSLLPSVS 351
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 2/226 (0%)
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
R + +++A + L+ G+Q+H+ + + DS+ ++ MY+ CGS D +F +
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 285 MP--EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ S WNSIIS + G +AL+ Y +M G D T +++ C L + +
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
+ G + + L+ Y ++G+++ +FDR+L+K+ + WN ++ GY
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
G + I+ F M +++ PN VTF VLS C+ L + G ++
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/598 (29%), Positives = 321/598 (53%), Gaps = 21/598 (3%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRS----IRGVKRVFGYMISNGFEPDLYMMNRVLHMH 168
EL G +G ++ N +G S ++ V+ ++ M++ D ++ +
Sbjct: 306 ELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ----DAVTFTEMITAY 361
Query: 169 VRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
+ G++ A ++FA++ E++ +++ L++G +G+ +A + F M + G T
Sbjct: 362 MSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR---GVELTDF 418
Query: 229 TMVRASAGLGLI---EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
++ A GL+ +V QIH +K G + + AL+DM ++C + DA+ +FDQ
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 286 PEK--STVGWNSIISGYALRGYSEEALSIY-LEMRDSGAKIDQFTISIVIRICARLASLE 342
P S+ SII GYA G ++A+S++ + + +D+ ++++++ +C L E
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
Q H ++ G+ SDI L+ Y+K +DA +F+ M +VISWN+LI+ Y
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI 598
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW--EIFYSMSRDHKVKP 460
G++A+ ++ +M + + P+ +T V+SA Y+ ++ ++F SM + ++P
Sbjct: 599 LQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEP 658
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
HY + +LG GLL+EA I S PV+P ++ ALL +CR+H N + K A+ +
Sbjct: 659 TTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLI 718
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
+P S Y++ N+YS+SG + + + ++ +G P SWI + + ++F
Sbjct: 719 LSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHAR 778
Query: 581 DKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDE-EEQRILKYHSEMLGIAYGLI 639
D SH Q K+IY+ ++ L+ E + GY E +L +VDE ++ L +HS L + YG++
Sbjct: 779 DTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGIL 838
Query: 640 NTPD-WTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
++ P+++ + +CG+CH K I++V REIV+RD+S FHHF NG CSC D W
Sbjct: 839 SSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 177/365 (48%), Gaps = 45/365 (12%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVR-----CGLMLDARK 179
T+ A++ CV + ++ G ++ +GF +++ N ++ ++ + C D K
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD---DVLK 239
Query: 180 LFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG-RSRTFATMVRASAGLG 238
LF ++P+RD SW T++S LV G +AF+ F M G S T +T++ +
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSK--------------------------- 271
++ GR++H A++ G+ ++ V ALI YSK
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 272 ----CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT 327
G ++ A +F + EK+T+ +N++++G+ G+ +AL ++ +M G ++ F+
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
++ + C ++ + ++Q H ++ G + T L+D ++ RM DA +FD+
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW- 478
Query: 388 RKNVISWNA---LIAGYGNHGQGEQAIEMFEQML-RERVIPNHVTFLAVLSACSYSGLSE 443
N+ S A +I GY +G ++A+ +F + L +++ + V+ +L+ C G E
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 444 RGWEI 448
G++I
Sbjct: 539 MGYQI 543
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 142/295 (48%), Gaps = 8/295 (2%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE-FN 220
N ++ +++ G +A +F + VS+ LISG EA + F M +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK--CGSIEDA 278
TF ++ A + +G QIH +K G FV+ +L+ +Y K S +D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICAR 337
+FD++P++ WN+++S G S +A ++ EM R G +D FT+S ++ C
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+ L ++ H +R G ++ N L+ FYSK+ M+ +++ M+ ++ +++ +
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
I Y + G + A+E+F + + N +T+ A+++ +G + ++F M
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEK----NTITYNALMAGFCRNGHGLKALKLFTDM 408
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 268/509 (52%), Gaps = 36/509 (7%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY +++ C + + V G + + ++ LY+ N ++ M+ R M AR+LF M
Sbjct: 146 TYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM 205
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQF-----------LCMWEEFNDG----------- 222
ERDAVSW +I+ G ++EAFE F + W + G
Sbjct: 206 FERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGAL 265
Query: 223 ----RSRTFATMV---------RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
R R F T + +A + +G I +G++IH A+ V LI MY
Sbjct: 266 GLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMY 325
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
SKC + A VF Q E S WNSIISGYA SEEA + EM +G + + T++
Sbjct: 326 SKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLA 385
Query: 330 IVIRICARLASLEHAKQAHAALVRHG-FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
++ +CAR+A+L+H K+ H ++R F + LVD Y+K G++ A+ V D M +
Sbjct: 386 SILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSK 445
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
++ +++ +LI GYGN G+G A+ +F++M R + P+HVT +AVLSACS+S L G +
Sbjct: 446 RDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL 505
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F M ++ ++P H++CM++L GR G L +A +I + P +P+ W LL AC +HG
Sbjct: 506 FMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
N +GK+AAEKL M+P YV++ NMY+++G + A V ++ G+ P C+WI
Sbjct: 566 NTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWI 625
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
+ F GD S + Y +D L
Sbjct: 626 DTDSGFSLFSVGDTSSPEACNTYPLLDGL 654
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 117/552 (21%), Positives = 227/552 (41%), Gaps = 86/552 (15%)
Query: 86 TSGLCSQIEKLALCNRYKEAMDLFEILELEGDGA---DVGGSTYDALVNVCVGLRSIRGV 142
+ L + LA +A F +L L+ A D+ + +L++ CV +R+
Sbjct: 3 SESLFKSLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAG 62
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+V + IS+G E ++ +++ + L +A+ + + + W LI+ +
Sbjct: 63 VQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKN 122
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
+ E + M + + T+ ++++A + GR +H +V
Sbjct: 123 ELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
ALI MY + ++ A+ +FD+M E+ V WN++I+ YA G EA ++ +M SG +
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 323 IDQFTISIV-----------------------------------IRICARLASLEHAKQA 347
+ T +I+ ++ C+ + ++ K+
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 348 HAALVRHGF-GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQ 406
H + + G D V NT L+ YSK + A VF + ++ +WN++I+GY +
Sbjct: 303 HGLAIHSSYDGIDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNK 361
Query: 407 GEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-----------YSM--- 452
E+A + +ML PN +T ++L C+ + G E Y+M
Sbjct: 362 SEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWN 421
Query: 453 ------SRDHKV-----------KPRAMHYACMIELLGREGLLDEAFALIRS---APVEP 492
++ K+ K + Y +I+ G +G A AL + + ++P
Sbjct: 422 SLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 493 TKNMWVALLTACRMHGNLVLGKFAAEKL-------YGMEPGKLSSYVMLLNMYSSSGKLM 545
VA+L+AC H LV E+L YG+ P L + ++++Y +G L
Sbjct: 482 DHVTVVAVLSACS-HSKLV---HEGERLFMKMQCEYGIRPC-LQHFSCMVDLYGRAGFLA 536
Query: 546 EAAGVLKTLKRK 557
+A ++ + K
Sbjct: 537 KAKDIIHNMPYK 548
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 180/431 (41%), Gaps = 32/431 (7%)
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRS-----RTFATMVRASAGLGLIEVGRQIHSCALKR 253
L G+ +AF+ F + + + S + A+++ A + G Q+H+ +
Sbjct: 13 LASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS 72
Query: 254 GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIY 313
GV S + L+ YS +AQ + + + WN +I+ YA EE ++ Y
Sbjct: 73 GVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAY 132
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
M G + D FT V++ C + + H ++ + S + L+ Y ++
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 374 GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
M AR +FDRM ++ +SWNA+I Y + G +A E+F++M V + +T+ +
Sbjct: 193 RNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIIS 252
Query: 434 SACSYSGLSERGWEIFYSMSR-DHKVKPRAMHY---ACMIELLGREGLLDEAFAL-IRSA 488
C +G + M + P AM AC L+G L E L I S+
Sbjct: 253 GGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC--SLIGAIRLGKEIHGLAIHSS 310
Query: 489 --PVEPTKNMWVALLTACR--MHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
++ +N + + + C+ H +V + E L ++ +++ Y+ K
Sbjct: 311 YDGIDNVRNTLITMYSKCKDLRHALIVFRQ--------TEENSLCTWNSIISGYAQLNKS 362
Query: 545 MEAAGVLKTLKRKGL--------TMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDN 596
EA+ +L+ + G ++LP C+ I + F C K+ ++
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 597 LMDEISRHGYI 607
L+D ++ G I
Sbjct: 423 LVDVYAKSGKI 433
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 270/482 (56%), Gaps = 6/482 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T LV+ C L + R + V G++I GF DL ++N +L+ + + +A LF +
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 224
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
E+D +SW T+I+ V +G AEA F M ++ + T +++A A +E GR
Sbjct: 225 AEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGR 284
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+ H A+++G+ + V+ AL+DMY KC S E+A VF ++P K V W ++ISG+ L G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 305 YSEEALSIY-LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
+ ++ + + + ++ + D + V+ C+ L LE AK H+ ++++GF S+
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RV 422
LV+ YS+ G + +A VF+ + K+ + W +LI GYG HG+G +A+E F M++ V
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
PN VTFL++LSACS++GL G IF M D+++ P HYA +++LLGR G LD A
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAI 524
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+ + P PT + LL ACR+H N + + A+KL+ +E Y+++ N+Y G
Sbjct: 525 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKG 584
Query: 543 KLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEIS 602
+ + ++K++G+ S IE++++ + F+ D+ H + + +Y L+ E+
Sbjct: 585 EWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVY----GLLKELD 640
Query: 603 RH 604
H
Sbjct: 641 LH 642
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 226/440 (51%), Gaps = 17/440 (3%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISN-GFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
T + C LR + + + G++ + DLY+ + +++M+++CG M++A ++F +
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQF--LCMWEEFNDGRSRTFATMVRASAGLGLIE 241
+ + D V+W +++SG +G+ +A E F + M + R T T+V A L
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRV-TLITLVSACTKLSNSR 180
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+GR +H ++RG D + +L++ Y+K + ++A +F + EK + W+++I+ Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
G + EAL ++ +M D G + + T+ V++ CA LE ++ H +R G +++
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE- 420
+T LVD Y K E+A VF R+ RK+V+SW ALI+G+ +G ++IE F ML E
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
P+ + + VL +CS G E+ + F+S + A ++EL R G L
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGN 419
Query: 481 AFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM------EPGKLSSYVML 534
A + ++ T +W +L+T +HG G A E M +P ++ +++ +
Sbjct: 420 ASKVFNGIALKDTV-VWTSLITGYGIHGK---GTKALETFNHMVKSSEVKPNEV-TFLSI 474
Query: 535 LNMYSSSGKLMEAAGVLKTL 554
L+ S +G + E + K +
Sbjct: 475 LSACSHAGLIHEGLRIFKLM 494
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 168/336 (50%), Gaps = 4/336 (1%)
Query: 175 LDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRAS 234
+DAR++F +M +R W TL+ L + E F M+ + + T ++A
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 235 AGLGLIEVGRQIHSCALKR-GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGW 293
L + G IH K +G D +V +LI MY KCG + +A +FD++ + V W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 294 NSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
+S++SG+ G +A+ + M S D+ T+ ++ C +L++ + H ++
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
R GF +D+ L++ Y+K ++A ++F + K+VISW+ +IA Y +G +A+
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F M+ + PN T L VL AC+ + E+G + + ++ ++ ++++
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMY 309
Query: 473 GREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
+ +EA+A+ P + + WVAL++ ++G
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLNG 344
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
K S DA+ +F +M ++S WN+++ + EE L + M K D FT+ +
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 331 VIRICARLASLEHAKQAHAALVRH-GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
++ C L + + + H + + GSD+ + L+ Y K GRM +A +FD + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQM-LRERVIPNHVTFLAVLSACS 437
++++W+++++G+ +G QA+E F +M + V P+ VT + ++SAC+
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 154/507 (30%), Positives = 279/507 (55%), Gaps = 4/507 (0%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
E+ G T +++ C ++ + V G ++ G E LY+ N +++M+ C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 173 LMLDARKL-FADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV 231
+ ++A L F D+ ++ V+W TLI+G G+ + + M E + V
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
RASA + + G+QIH+ +KRG + V +++D+Y +CG + +A+ F +M +K +
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 292 GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
WN++IS R S EAL ++ G + +T + ++ CA +A+L +Q H +
Sbjct: 281 TWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 352 VRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML-RKNVISWNALIAGYGNHGQGEQA 410
R GF ++ L+D Y+K G + D++ VF ++ R+N++SW +++ GYG+HG G +A
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 470
+E+F++M+ + P+ + F+AVLSAC ++GL E+G + F M ++ + P Y C+++
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 471 LLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG-NLVLGKFAAEKLYGMEPGKLS 529
LLGR G + EA+ L+ P +P ++ W A+L AC+ H N ++ + AA K+ ++P +
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVG 519
Query: 530 SYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKE 589
+YVML +Y++ GK ++ A V K ++ G SWI V+ Q ++F DK
Sbjct: 520 TYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASS 579
Query: 590 IYQKVDNLMDEISRHGYIEEHEMLLPD 616
+Y + L++E GY+ E + L+ D
Sbjct: 580 VYSVLGLLIEETREAGYVPELDSLVND 606
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 208/425 (48%), Gaps = 42/425 (9%)
Query: 172 GLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV 231
GL+ +AR LF +MP+RD V+W +I+G S A A+E F M ++ T ++++
Sbjct: 59 GLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVL 118
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC-VFDQMPEKST 290
++ + ++ G +H +K G+ +V A+++MY+ C +A C +F + K+
Sbjct: 119 KSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKND 178
Query: 291 VGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAA 350
V W ++I+G+ G L +Y +M A++ + I+I +R A + S+ KQ HA+
Sbjct: 179 VTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHAS 238
Query: 351 LVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQA 410
+++ GF S++ ++D Y + G + +A+H F M K++I+WN LI+ +A
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEA 297
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI- 469
+ MF++ + +PN TF ++++AC+ G ++ + R K + A +
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 470 ---------------ELLGREGLLD------------------EAFALIRSAPVEPTKNM 496
E++ R L+ E F + S+ + P + +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 497 WVALLTACRMHGNLV---LGKF-AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLK 552
++A+L+ACR H LV L F E YG+ P + Y ++++ +GK+ EA +++
Sbjct: 418 FMAVLSACR-HAGLVEKGLKYFNVMESEYGINPDR-DIYNCVVDLLGRAGKIGEAYELVE 475
Query: 553 TLKRK 557
+ K
Sbjct: 476 RMPFK 480
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 8/226 (3%)
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
+A LI Y + G +E+A+ +FD+MP++ V W ++I+GYA Y+ A + EM
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG-RMED 378
G ++FT+S V++ C + L + H +V+ G + + +++ Y+ ME
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER--VIPNHVTFLAVLSAC 436
A +F + KN ++W LI G+ + G G ++M++QML E V P +T +AV ++
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IAVRASA 224
Query: 437 SYSGLSERGWEIFYS-MSRDHKVKPRAMHYACMIELLGREGLLDEA 481
S ++ G +I S + R + M+ +++L R G L EA
Sbjct: 225 SIDSVTT-GKQIHASVIKRGFQSNLPVMN--SILDLYCRCGYLSEA 267
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 255/442 (57%), Gaps = 3/442 (0%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y + + L+ + DG D + + CVGL + + G + NG + D Y+
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVF--AIKACVGLGLLENGILIHGLAMKNGLDKDDYVA 147
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
++ M+ + G M A+K+F ++P R++V W L+ G + E F F M +
Sbjct: 148 PSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLA 207
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRG-VGEDSFVACALIDMYSKCGSIEDAQC 280
+ T +V+A + +VG+ +H +++R + + ++ ++IDMY KC +++A+
Sbjct: 208 LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARK 267
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
+F+ +++ V W ++ISG+A + EA ++ +M +Q T++ ++ C+ L S
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGS 327
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAG 400
L H K H ++R+G D V T +D Y++ G ++ AR VFD M +NVISW+++I
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
+G +G E+A++ F +M + V+PN VTF+++LSACS+SG + GW+ F SM+RD+ V P
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
HYACM++LLGR G + EA + I + PV+P + W ALL+ACR+H + L AEKL
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 521 YGMEPGKLSSYVMLLNMYSSSG 542
MEP K S YV+L N+Y+ +G
Sbjct: 508 LSMEPEKSSVYVLLSNIYADAG 529
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
R+R T++ + L + Q+H+ + G ++ + +L + Y + ++ A
Sbjct: 5 NRARALLTILSQAKTLNHTQ---QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSS 61
Query: 282 FDQMP--EKSTVGWNSIISGYALRG---YSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
F+++P +++ WN+I+SGY+ YS + L +Y MR +D F + I+ C
Sbjct: 62 FNRIPCWKRNRHSWNTILSGYSKSKTCCYS-DVLLLYNRMRRHCDGVDSFNLVFAIKACV 120
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
L LE+ H +++G D LV+ Y++ G ME A+ VFD + +N + W
Sbjct: 121 GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGV 180
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
L+ GY + + + +F M + + +T + ++ AC + G + R
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRS 240
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
+ A +I++ + LLD A L ++ V+ MW L++
Sbjct: 241 FIDQSDYLQASIIDMYVKCRLLDNARKLFETS-VDRNVVMWTTLISG 286
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 267/480 (55%), Gaps = 5/480 (1%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
ST+ + C+ + + V+ + G++ D+++ + VL+++++CG M +A LF
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGK 176
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFAT-MVRASAGLGLIEV 242
M +RD + W T+++G +G +A E + M E GR R +++AS LG ++
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE-GFGRDRVVMLGLLQASGDLGDTKM 235
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
GR +H + G+ + V +L+DMY+K G IE A VF +M K+ V W S+ISG+A
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV-RHGFGSDIV 361
G + +A +EM+ G + D T+ V+ C+++ SL+ + H ++ RH D V
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL--DRV 353
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
T L+D YSK G + +R +F+ + RK+++ WN +I+ YG HG G++ + +F +M
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
+ P+H TF ++LSA S+SGL E+G F M +K++P HY C+I+LL R G ++EA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+I S ++ +WVALL+ C H NL +G AA K+ + P + ++ N ++++
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
K E A V K ++ + +P S IEV + FL D SH + + Q + NL EI
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 218/460 (47%), Gaps = 41/460 (8%)
Query: 136 LRSIRGVKR----VFGYMISNGFEPDLYMMNRVLHMHV-RCGLMLDARKLFADMPERDAV 190
L+SI +KR + ++IS G + ++R L R G + ARK+F ++P+R
Sbjct: 23 LQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVS 82
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCA 250
+ ++I N E + M E S TF ++A ++E G + A
Sbjct: 83 VYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKA 142
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEAL 310
+ G D FV +++++Y KCG +++A+ +F +M ++ + W ++++G+A G S +A+
Sbjct: 143 VDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAV 202
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
Y EM++ G D+ + +++ L + + H L R G ++V T LVD Y
Sbjct: 203 EFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY 262
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+K G +E A VF RM+ K +SW +LI+G+ +G +A E +M P+ VT +
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDH---KVKPRA---MHYAC--------MIELLGREG 476
VL ACS G + G + + + H +V A M+ C + E +GR+
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 477 LL---------------DEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAE 518
L+ E +L + + +EP + +LL+A G + G+
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 519 KL---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
+ Y ++P + YV L+++ + +G++ EA ++ + K
Sbjct: 443 VMINKYKIQPSE-KHYVCLIDLLARAGRVEEALDMINSEK 481
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 255/479 (53%), Gaps = 42/479 (8%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA---FEQFL 213
+LY N ++ +V+ G+++ AR +F MPERD VSW T++ G GN EA +++F
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG 273
+FN+ +FA ++ A +++ RQ H L G + ++C++ID Y+KCG
Sbjct: 172 RSGIKFNEF---SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 274 SIEDAQCVFD-------------------------------QMPEKSTVGWNSIISGYAL 302
+E A+ FD +MPEK+ V W ++I+GY
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
+G AL ++ +M G K +QFT S + A +ASL H K+ H ++R + +
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 363 NTGLVDFYSKWGRMEDARHVFDRML--RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
+ L+D YSK G +E + VF R+ + + + WN +I+ HG G +A+ M + M++
Sbjct: 349 ISSLIDMYSKSGSLEASERVF-RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
RV PN T + +L+ACS+SGL E G F SM+ H + P HYAC+I+LLGR G E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 481 AFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
I P EP K++W A+L CR+HGN LGK AA++L ++P + Y++L ++Y+
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 541 SGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTK--EIYQKVDNL 597
GK + +K++ + SWIE++K+ AF D SH + EIY + NL
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 168/372 (45%), Gaps = 75/372 (20%)
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+ R + KR ++ ++ LI MY KCG DA VFDQM ++ WN+++SGY
Sbjct: 68 IHRHLKITGFKR---PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 302 --------------------------LRGYSE-----EALSIYLEMRDSGAKIDQFTISI 330
+ GY++ EAL Y E R SG K ++F+ +
Sbjct: 125 KSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAG 184
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML--- 387
++ C + L+ +QAH ++ GF S++V + ++D Y+K G+ME A+ FD M
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 388 ----------------------------RKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
KN +SW ALIAGY G G +A+++F +M+
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
V P TF + L A + G EI M R + V+P A+ + +I++ + G L+
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSLE 363
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL-----YGMEPGKLSSYVML 534
+ + R + W +++A HG LG A L + ++P + ++ V++
Sbjct: 364 ASERVFRICDDKHDCVFWNTMISALAQHG---LGHKALRMLDDMIKFRVQPNR-TTLVVI 419
Query: 535 LNMYSSSGKLME 546
LN S SG + E
Sbjct: 420 LNACSHSGLVEE 431
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 156/357 (43%), Gaps = 40/357 (11%)
Query: 102 YKEAMDLFEIL----ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPD 157
Y + +L E L E G ++ L+ CV R ++ ++ G ++ GF +
Sbjct: 154 YAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLC--- 214
+ + ++ + +CG M A++ F +M +D W TLISG G+ EA E+ C
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDM-EAAEKLFCEMP 272
Query: 215 -----MWEEFNDGRSR------------------------TFATMVRASAGLGLIEVGRQ 245
W G R TF++ + ASA + + G++
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISGYALRG 304
IH ++ V ++ V +LIDMYSK GS+E ++ VF +K V WN++IS A G
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL-VRHGFGSDIVAN 363
+AL + +M + ++ T+ +++ C+ +E + ++ V+HG D
Sbjct: 393 LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 364 TGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
L+D + G ++ + M + WNA++ HG E + +++++
Sbjct: 453 ACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK 509
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 285 bits (730), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 281/502 (55%), Gaps = 3/502 (0%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
YKEA++ F + G +D T +++ L ++ + Y+I +G++ +L +
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMT--SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ M+ +C L + F M ++D +SW T+I+G + + EA E F + ++ +
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
+++RAS+ L + + ++IH L++G+ D+ + L+D+Y KC ++ A V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
F+ + K V W S+IS AL G EA+ ++ M ++G D + ++ A L++L
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
++ H L+R GF + +VD Y+ G ++ A+ VFDR+ RK ++ + ++I Y
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 663
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
G HG G+ A+E+F++M E V P+H++FLA+L ACS++GL + G M +++++P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY 521
HY C++++LGR + EAF ++ EPT +W ALL ACR H +G+ AA++L
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 522 GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGD 581
+EP + V++ N+++ G+ + V +K G+ P CSWIE+ + + F D
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARD 843
Query: 582 KSHTQTKEIYQKVDNLMDEISR 603
KSH ++KEIY+K+ + ++ R
Sbjct: 844 KSHPESKEIYEKLSEVTRKLER 865
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 164/323 (50%), Gaps = 2/323 (0%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
+G +G S++ AL+ C LR IR + ++ G+ +++N ++ M+ + +
Sbjct: 176 EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 177 ARKLFADMPER-DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASA 235
AR+LF E+ DAV W +++S SG E E F M S T + + A
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 236 GLGLIEVGRQIHSCALKRGVGEDSFVAC-ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
G ++G++IH+ LK C ALI MY++CG + A+ + QM V WN
Sbjct: 296 GFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWN 355
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
S+I GY +EAL + +M +G K D+ +++ +I RL++L + HA +++H
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH 415
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
G+ S++ L+D YSK F RM K++ISW +IAGY + +A+E+F
Sbjct: 416 GWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 415 EQMLRERVIPNHVTFLAVLSACS 437
+ ++R+ + + ++L A S
Sbjct: 476 RDVAKKRMEIDEMILGSILRASS 498
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 171/333 (51%), Gaps = 7/333 (2%)
Query: 107 DLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN--GFEPDLYMMNRV 164
+ F+ L++ + + V Y ++ +C R++ +++ + FE D ++ ++
Sbjct: 66 EAFQRLDVSENNSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKL 122
Query: 165 LHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS 224
+ M+ +CG + DA K+F +MP+R A +W T+I V +G A A + M E
Sbjct: 123 VFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGL 182
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
+F +++A A L I G ++HS +K G F+ AL+ MY+K + A+ +FD
Sbjct: 183 SSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDG 242
Query: 285 MPEK-STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
EK V WNSI+S Y+ G S E L ++ EM +G + +TI + C + +
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 344 AKQAHAALVRHG-FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
K+ HA++++ S++ L+ Y++ G+M A + +M +V++WN+LI GY
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ ++A+E F M+ + V+ ++++A
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 132/269 (49%), Gaps = 2/269 (0%)
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDA 278
N+ FA ++ + GRQ+HS K E F+A L+ MY KCGS++DA
Sbjct: 76 NNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDA 135
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+ VFD+MP+++ WN++I Y G AL++Y MR G + + +++ CA+L
Sbjct: 136 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 195
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-NVISWNAL 397
+ + H+ LV+ G+ S LV Y+K + AR +FD K + + WN++
Sbjct: 196 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
++ Y G+ + +E+F +M PN T ++ L+AC ++ G EI S+ +
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIR 486
+I + R G + +A ++R
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILR 344
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/464 (33%), Positives = 263/464 (56%), Gaps = 4/464 (0%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP-ERDAVSWMTLISGLV 200
+K+V ++ G + ++ + N ++ + CG + DA+++F + +D +SW ++I+G
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
AFE F+ M + + T+ ++ A +G G+ +H +K+G+ + +
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 261 VACALIDMYSK--CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
ALI MY + G++EDA +F+ + K + WNSII+G+A +G SE+A+ + +R
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
S K+D + S ++R C+ LA+L+ +Q HA + GF S+ + L+ YSK G +E
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 379 ARHVFDRMLRK-NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
AR F ++ K + ++WNA+I GY HG G+ ++++F QM + V +HVTF A+L+ACS
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMW 497
++GL + G E+ M +K++PR HYA ++LLGR GL+++A LI S P+ P +
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVL 581
Query: 498 VALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
L CR G + + A L +EP +YV L +MYS K E A V K +K +
Sbjct: 582 KTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKER 641
Query: 558 GLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
G+ +P SWIE++ Q AF D+S+ ++IY + +L E+
Sbjct: 642 GVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 182/356 (51%), Gaps = 21/356 (5%)
Query: 148 YMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAE 207
Y I G D+Y+ NR+L +++ G + A LF +MP+RD+VSW T+ISG G +
Sbjct: 25 YAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLED 84
Query: 208 AFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALID 267
A+ F CM +D +F+ +++ A + ++G Q+H +K G + +V +L+D
Sbjct: 85 AWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 268 MYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI--YLEMRDSGAKIDQ 325
MY+KC +EDA F ++ E ++V WN++I+G+ + A + +EM+ + +D
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMK-AAVTMDA 203
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T + ++ + KQ HA +++ G +I ++ Y+ G + DA+ VFD
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 386 M-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
+ K++ISWN++IAG+ H E A E+F QM R V + T+ +LSACS
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS------- 316
Query: 445 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
+H++ +++H M+ G E + ALI PT M AL
Sbjct: 317 --------GEEHQIFGKSLH--GMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 202/416 (48%), Gaps = 11/416 (2%)
Query: 99 CNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDL 158
C + ++A LF ++ G+DV G ++ L+ ++ ++V G +I G+E ++
Sbjct: 79 CGKLEDAWCLFTCMK--RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNV 136
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE 218
Y+ + ++ M+ +C + DA + F ++ E ++VSW LI+G V + AF +L E
Sbjct: 137 YVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAF--WLLGLME 194
Query: 219 FNDGRSR---TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+ TFA ++ + +Q+H+ LK G+ + + A+I Y+ CGS+
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 276 EDAQCVFDQM-PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRI 334
DA+ VFD + K + WNS+I+G++ E A ++++M+ + D +T + ++
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 335 CARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW--GRMEDARHVFDRMLRKNVI 392
C+ K H +++ G A L+ Y ++ G MEDA +F+ + K++I
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
SWN++I G+ G E A++ F + + + F A+L +CS + G +I +++
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HAL 433
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
+ + +I + + G+++ A + + + W A++ HG
Sbjct: 434 ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/481 (33%), Positives = 259/481 (53%), Gaps = 33/481 (6%)
Query: 121 VGGSTYDALVNVC-VGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARK 179
+GG D+ +N V + + G R+ YM+ EPD + ++ ++ + CG + ++R
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 180 LFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL 239
LF R + W ++ISG + + EA F M E + SRT A ++ A GLG
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRED-SRTLAAVINACIGLGF 333
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS------------------------- 274
+E G+Q+H A K G+ +D VA L+DMYSKCGS
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 275 ------IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
I+DA+ VF+++ KS + WNS+ +G++ G + E L + +M D+ ++
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
S VI CA ++SLE +Q A G SD V ++ L+D Y K G +E R VFD M++
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
+ + WN++I+GY +GQG +AI++F++M + P +TF+ VL+AC+Y GL E G ++
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F SM DH P H++CM++LL R G ++EA L+ P + +MW ++L C +G
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
+GK AAEK+ +EP +YV L ++++SG +A V K ++ +T P SW
Sbjct: 634 YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Query: 569 E 569
+
Sbjct: 694 D 694
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 150/335 (44%), Gaps = 75/335 (22%)
Query: 143 KRVFGYMISNGFEPDLYMM-NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
++ G ++ GF + ++ N +L M+ R G M AR LF +MP+R+ SW T+I G ++
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
SG + F M E D +
Sbjct: 106 SGEKGTSLRFFDMMPE---------------------------------------RDGYS 126
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
++ ++K G + A+ +F+ MPEK V NS++ GY L GY+EEAL ++ E+ S
Sbjct: 127 WNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA- 185
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK--------- 372
D T++ V++ CA L +L+ KQ HA ++ G D N+ LV+ Y+K
Sbjct: 186 --DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 373 ----------------------WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQA 410
GR+ ++R +FDR + VI WN++I+GY + +A
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 445
+ +F +M R + T AV++AC G E G
Sbjct: 304 LVLFNEM-RNETREDSRTLAAVINACIGLGFLETG 337
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 11/213 (5%)
Query: 345 KQAHAALVRHGFGSDIV-ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
+Q + L++ GF S IV L+ YS+ G+M AR++FD M +N SWN +I GY N
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
G+ ++ F+ M+ ER + ++ V+S + +G +F +M V ++
Sbjct: 106 SGEKGTSLRFFD-MMPER---DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSL 161
Query: 464 HYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGK-FAAEKLYG 522
+ ++ G +EA L + +L AC L GK A+ L G
Sbjct: 162 LHGYIL-----NGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIG 216
Query: 523 MEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
L+N+Y+ G L A+ +L+ ++
Sbjct: 217 GVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR 249
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/509 (32%), Positives = 273/509 (53%), Gaps = 7/509 (1%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
N ++ A+ L+ ++ G D TY+ + C L I + V + G E D++
Sbjct: 111 NDHEAALSLYRRMKFSGLKPD--KFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVH 168
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
+ + ++ M+ +CG + ARKLF ++ ERD VSW ++ISG ++G +A + F M EE
Sbjct: 169 INHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
+ RT +M+ A + LG + GR + A+ + +G +F+ LI MY KCG ++ A+
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSAR 288
Query: 280 CVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
VF+QM +K V W ++I+ Y+ G S EA ++ EM +G D T+S V+ C +
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
+LE KQ +I TGLVD Y K GR+E+A VF+ M KN +WNA+I
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
Y + G ++A+ +F++M V P+ +TF+ VLSAC ++GL +G F+ MS +
Sbjct: 409 AYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 460 PRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK 519
P+ HY +I+LL R G+LDEA+ + P +P + M A+L AC ++ + + A
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRM 525
Query: 520 LYGMEPGK-LSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFL 578
L M+ K +YV+ N+ + E+A + ++ +G+ P CSWIE++ + FL
Sbjct: 526 LMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFL 585
Query: 579 CG-DKSHTQTKEIYQKVDNLMDEISRHGY 606
G D ++ D L++E+ R Y
Sbjct: 586 AGSDYLQCGREDSGSLFDLLVEEMKRERY 614
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 255/471 (54%), Gaps = 5/471 (1%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD-AVSWMTLISGLV 200
VK+V G GF+ D Y+ + ++ + + + DA+K+F ++P+RD +V W L++G
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+ +A F M EE T +++ A G I+ GR IH A+K G G D
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
V+ ALIDMY K +E+A +F+ M E+ WNS++ + G + L+++ M SG
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF----GSDIVANTGLVDFYSKWGRM 376
+ D T++ V+ C RLASL ++ H ++ G S+ + L+D Y K G +
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 377 EDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
DAR VFD M K+ SWN +I GYG GE A++MF M R V P+ +TF+ +L AC
Sbjct: 419 RDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 478
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
S+SG G M + + P + HYAC+I++LGR L+EA+ L S P+ +
Sbjct: 479 SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 497 WVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
W ++L++CR+HGN L A ++L+ +EP YV++ N+Y +GK E V +++
Sbjct: 539 WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQ 598
Query: 557 KGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYI 607
+ + P CSWI +K + F G+++H + K I+ + ++ + H Y+
Sbjct: 599 QNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYM 649
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 219/430 (50%), Gaps = 14/430 (3%)
Query: 143 KRVFGYMISNGFEPDLYMM-NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
+++ G+M+ GF D +++M+ +CGLM A +F ERD + LISG V
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVV 138
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+G+ +A E + M TF ++++ S + L +V +++H A K G D +V
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFKLGFDSDCYV 197
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
L+ YSK S+EDAQ VFD++P++ +V WN++++GY+ E+AL ++ +MR+ G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
+ + TI+ V+ +++ + H V+ G GSDIV + L+D Y K +E+A
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG 440
+F+ M +++ +WN+++ + G + + +FE+ML + P+ VT VL C
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 441 LSERGWEI----FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
+G EI S + K +H + M ++ + G L +A + S V+ + +
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM-DMYVKCGDLRDARMVFDSMRVKDSAS- 435
Query: 497 WVALLTACRMH--GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
W ++ + G L L F+ G++P ++ ++V LL S SG L E L +
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCMCRAGVKPDEI-TFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 555 KRKGLTMLPT 564
+ +LPT
Sbjct: 495 ETV-YNILPT 503
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 133/247 (53%), Gaps = 5/247 (2%)
Query: 243 GRQIHSCALKRGVGEDSFVA-CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
G+QIH +++G +DS A +L++MY+KCG + A VF E+ G+N++ISG+
Sbjct: 79 GQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFV 137
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
+ G +A+ Y EMR +G D++T +++ + L K+ H + GF SD
Sbjct: 138 VNGSPLDAMETYREMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSDCY 196
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRML-RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
+GLV YSK+ +EDA+ VFD + R + + WNAL+ GY + E A+ +F +M E
Sbjct: 197 VGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE 256
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
V + T +VLSA + SG + G I + ++ + +I++ G+ L+E
Sbjct: 257 GVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 481 AFALIRS 487
A ++ +
Sbjct: 316 ANSIFEA 322
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 149/327 (45%), Gaps = 28/327 (8%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R+++A+ +F + EG G V T ++++ I + + G + G D+ +
Sbjct: 242 RFEDALLVFSKMREEGVG--VSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA---FEQFLCMWE 217
N ++ M+ + + +A +F M ERD +W +++ G++ FE+ LC
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV----GEDSFVACALIDMYSKCG 273
+ T T++ L + GR+IH + G+ + F+ +L+DMY KCG
Sbjct: 360 RPD---IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCG 416
Query: 274 SIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIR 333
+ DA+ VFD M K + WN +I+GY ++ E AL ++ M +G K D+ T +++
Sbjct: 417 DLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQ 476
Query: 334 ICARLASLEHAKQAHAALVRHGFGSDIVAN--------TGLVDFYSKWGRMEDARHV-FD 384
C+ L + A + + V N ++D + ++E+A +
Sbjct: 477 ACSHSGFLNEGRNFLAQM-------ETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 385 RMLRKNVISWNALIAGYGNHGQGEQAI 411
+ + N + W ++++ HG + A+
Sbjct: 530 KPICDNPVVWRSILSSCRLHGNKDLAL 556
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 265/476 (55%), Gaps = 8/476 (1%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
A+C++ + + ++ G D+ T+ + C IR K++ G + GF
Sbjct: 82 AVCDKPRVTIFAYKTFVSNGFSPDM--FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYD 139
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D+Y+ N ++H + CG +A K+F +MP RD VSW +I+G +G Y EA + F M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
E N T+ ++ +S +G + +G+ IH LKR ALIDMY KC +
Sbjct: 200 VEPNLA---TYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR-DSGAKIDQFTISIVIRIC 335
DA VF ++ +K V WNS+ISG S+EA+ ++ M+ SG K D ++ V+ C
Sbjct: 257 DAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
A L +++H + H ++ G D T +VD Y+K G +E A +F+ + KNV +WN
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWN 376
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SR 454
AL+ G HG G +++ FE+M++ PN VTFLA L+AC ++GL + G F+ M SR
Sbjct: 377 ALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV-LG 513
++ + P+ HY CMI+LL R GLLDEA L+++ PV+P + A+L+AC+ G L+ L
Sbjct: 437 EYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELP 496
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
K + +E YV+L N+++++ + + A + + +K KG++ +P S+IE
Sbjct: 497 KEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 5/196 (2%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK--STVGWNSII 297
+ V +QI + + R + D + ++ K V S+ +N+++
Sbjct: 19 LRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLL 78
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
S YA+ + Y +G D FT V + C + + + KQ H + + GF
Sbjct: 79 SSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFY 138
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
DI LV FY G +A VF M ++V+SW +I G+ G ++A++ F +M
Sbjct: 139 DDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM 198
Query: 418 LRERVIPNHVTFLAVL 433
E PN T++ VL
Sbjct: 199 DVE---PNLATYVCVL 211
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 12/243 (4%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I L C R KEA+DLF +++ G G ++++ C L ++ + V Y++
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQ-TSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
+ G + D ++ ++ M+ +CG + A ++F + ++ +W L+ GL G+ E+
Sbjct: 334 TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLR 393
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG---EDSFVACALID 267
F M + TF + A GL++ GR+ R + C +ID
Sbjct: 394 YFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC-MID 452
Query: 268 MYSKCGSIEDAQCVFDQMPEKSTVGW-NSIISGYALRG----YSEEALSIYL--EMRDSG 320
+ + G +++A + MP K V +I+S RG +E L +L E DSG
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSG 512
Query: 321 AKI 323
+
Sbjct: 513 VYV 515
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 264/472 (55%), Gaps = 6/472 (1%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
+ I + + C + +A+ LF+ E+ + TY +++ C L ++ ++ G +
Sbjct: 83 AMISRFSRCGYHPDALLLFK--EMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
+L + + +L ++ RCG M +AR F M ERD VSW +I G + +F
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYS 270
F M E TF +++RAS + +E+ ++H A+K G G S + +L++ Y
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGY-SEEALSIYLEMRDSGAKIDQFTIS 329
KCGS+ +A + + ++ + ++I+G++ + + +A I+ +M K+D+ +S
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 330 IVIRICARLASLEHAKQAHA-ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+++IC +AS+ +Q H AL D+ L+D Y+K G +EDA F+ M
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE 380
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
K+V SW +LIAGYG HG E+AI+++ +M ER+ PN VTFL++LSACS++G +E GW+I
Sbjct: 381 KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKI 440
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP--VEPTKNMWVALLTACRM 506
+ +M H ++ R H +C+I++L R G L+EA+ALIRS V + + W A L ACR
Sbjct: 441 YDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRR 500
Query: 507 HGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
HGN+ L K AA +L MEP K +Y+ L ++Y+++G A K +K G
Sbjct: 501 HGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 220/474 (46%), Gaps = 45/474 (9%)
Query: 136 LRSIRGVKR----VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVS 191
L S + VK+ + G I+NGF +L + + ++ ++++ G + ARKLF + +RD VS
Sbjct: 21 LCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVS 80
Query: 192 WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL 251
W +IS G + +A F M E T+ +++++ LG ++ G QIH
Sbjct: 81 WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 252 KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
K + V AL+ +Y++CG +E+A+ FD M E+ V WN++I GY ++ + S
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
++ M G K D FT ++R + LE + H ++ GFG LV+ Y
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQ-GEQAIEMFEQMLRERVIPNHVTFL 430
K G + +A + + +++++S ALI G+ A ++F+ M+R + + V
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 431 AVLSACS----------YSGLSERGWEIFYSMSRDHKV---------------------K 459
++L C+ G + + +I + ++ + + +
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE 380
Query: 460 PRAMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
+ +I GR G ++A L + ++P +++LL+AC G LG
Sbjct: 381 KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKI 440
Query: 517 AEKL---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
+ + +G+E + +++M + SG L EA ++++ ++G+ L + +W
Sbjct: 441 YDTMINKHGIE-AREEHLSCIIDMLARSGYLEEAYALIRS--KEGIVSLSSSTW 491
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 337 RLASLEHAKQA----HAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
+L S ++ K+ H + +GF S++ L+D Y K G ++ AR +FDR+ +++V+
Sbjct: 20 KLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
SW A+I+ + G A+ +F++M RE V N T+ +VL +C G + G +I S+
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEA 481
+ + + A ++ L R G ++EA
Sbjct: 140 EKGNCAGNLIVRSA-LLSLYARCGKMEEA 167
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 272/503 (54%), Gaps = 34/503 (6%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
++V G++I GF+ D+++ N ++ + +C + ARK+F +M ERD VSW ++ISG S
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 203 GNYAEAFEQFLCMW--EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
G++ + + + M +F T ++ +A + G ++H ++ + D
Sbjct: 212 GSFEDCKKMYKAMLACSDFKP-NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-- 318
+ A+I Y+KCGS++ A+ +FD+M EK +V + +IISGY G +EA++++ EM
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 319 -----------------------------SGAKIDQFTISIVIRICARLASLEHAKQAHA 349
G++ + T+S ++ ++L+ K+ HA
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQ 409
+R+G ++I T ++D Y+K G + A+ VFD +++I+W A+I Y HG +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 469
A +F+QM P+ VT AVLSA ++SG S+ IF SM + ++P HYACM+
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMV 510
Query: 470 ELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLS 529
+L R G L +A I P++P +W ALL + G+L + +FA ++L+ MEP
Sbjct: 511 SVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTG 570
Query: 530 SYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKE 589
+Y ++ N+Y+ +G+ EA V +KR GL +P SWIE +K +F+ D S ++KE
Sbjct: 571 NYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKE 630
Query: 590 IYQKVDNLMDEISRHGYIEEHEM 612
+Y+ ++ L++ +S YI + E+
Sbjct: 631 MYEIIEGLVESMSDKEYIRKQEL 653
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 199/451 (44%), Gaps = 58/451 (12%)
Query: 109 FEILE-LEG--DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVL 165
FEI L+G + A V G Y L+ R V ++ ++ +PD ++ ++++
Sbjct: 5 FEIQRALQGLLNKAAVDGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLI 64
Query: 166 HMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL------CMWEEF 219
+ R A +F ++ R+A S+ L+ Y +AF FL C +
Sbjct: 65 SFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDA 124
Query: 220 NDGRSRTFATMVRASAG---LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
S + + +++A +G L + RQ+H ++ G D FV +I Y+KC +IE
Sbjct: 125 ARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIE 184
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-SGAKIDQFTISIVIRIC 335
A+ VFD+M E+ V WNS+ISGY+ G E+ +Y M S K + T+ V + C
Sbjct: 185 SARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+ + L + H ++ + D+ ++ FY+K G ++ AR +FD M K+ +++
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 396 ALIAGYGNHG-------------------------------QGEQAIEMFEQMLRERVIP 424
A+I+GY HG E+ I F +M+R P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRD------HKVKPRAMHYACMIELLGREGLL 478
N VT ++L + +YS + G EI R+ + +YA + LLG + +
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
D + + W A++TA +HG+
Sbjct: 425 DNC--------KDRSLIAWTAIITAYAVHGD 447
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 134/328 (40%), Gaps = 60/328 (18%)
Query: 79 AHVMKPSTSGLCSQIEKLALC------------NRYKEAMDLFEILELEGDGADVGGSTY 126
AH + L S++E + L N ++E ++ F E+ G+ T
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFR--EMIRCGSRPNTVTL 369
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
+L+ +++G K + + I NG + ++Y+ ++ + + G +L A+++F + +
Sbjct: 370 SSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD 429
Query: 187 RDAVSWMTLISGLV---DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
R ++W +I+ DS + F+Q C+ + +D T ++ A A G ++
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD---VTLTAVLSAFAHSGDSDMA 486
Query: 244 RQIHSCALKRGVGEDSF--VACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-WNSIISGY 300
+ I L + E AC ++ + S+ G + DA +MP W ++++G
Sbjct: 487 QHIFDSMLTKYDIEPGVEHYAC-MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
++ G E I +F C RL +E + +
Sbjct: 546 SVLGDLE---------------IARFA-------CDRLFEMEPENTGNYTI--------- 574
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ + Y++ GR E+A V ++M R
Sbjct: 575 -----MANLYTQAGRWEEAEMVRNKMKR 597
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 258/463 (55%), Gaps = 38/463 (8%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K++ +I GF+PDL + ++L +H++CG + AR++F ++P+ ++ +ISG +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 203 GNYAEAF--EQFLCMWEEFNDGRSRTFATMVRASAGLGLI---EVGRQIHSCALKRGVGE 257
G E Q + E DG + + S G +I + R +H+ +K V
Sbjct: 114 GLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVEL 173
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA-------- 309
D + AL+D Y K G +E A+ VF+ M +++ V S+ISGY +G+ E+A
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 310 ------------------------LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
+ +Y+ M+ +G + T + VI C+ L S E +
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
Q HA +++ G + I + L+D Y+K G + DAR VFD+M KNV SW ++I GYG +G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
E+A+E+F +M R+ PN+VTFL LSACS+SGL ++G+EIF SM RD+ +KP+ HY
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 466 ACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEP 525
AC+++L+GR G L++AF R+ P P ++W ALL++C +HGN+ L AA +L+ +
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 473
Query: 526 GKLS-SYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
K +Y+ L N+Y+S+ K + + + +KR+ ++ SW
Sbjct: 474 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 165/381 (43%), Gaps = 76/381 (19%)
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+ G++IH+ +K G D ++ L+ ++ KCG + A+ VFD++P+ + +N +ISGY
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL-----EHAKQAHAALVRHG 355
G +E L + M SG K D +T+S+V++ S + HA +++
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG---------- 405
D V T LVD Y K G++E AR VF+ M +NV+ ++I+GY N G
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 406 -------------------QGEQA---IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
GE A ++M+ M R PN TF +V+ ACS E
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 444 RGWEIFYSMSR------------------------------DHKVKPRAMHYACMIELLG 473
G ++ + + D + + MI+ G
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 474 REGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF----AAEKLYGMEPG 526
+ G +EA F ++ +EP ++ L+AC H LV + + ++ Y M+P
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACS-HSGLVDKGYEIFESMQRDYSMKP- 408
Query: 527 KLSSYVMLLNMYSSSGKLMEA 547
K+ Y ++++ +G L +A
Sbjct: 409 KMEHYACIVDLMGRAGDLNKA 429
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER 187
ALV+ V + + VF M + ++ ++ ++ G + DA ++F +
Sbjct: 180 ALVDTYVKSGKLESARTVFETMK----DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK 235
Query: 188 DAVSWMTLISGLVDSGNYAE-AFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
D V + ++ G SG A+ + + ++ M TFA+++ A + L EVG+Q+
Sbjct: 236 DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQV 295
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYS 306
H+ +K GV + +L+DMY+KCG I DA+ VFDQM EK+ W S+I GY G
Sbjct: 296 HAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 307 EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR-HGFGSDIVANTG 365
EEAL ++ M++ + + T + C+ ++ + ++ R + +
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYAC 415
Query: 366 LVDFYSKWGRMEDARHVFDRML--RKNVISWNALIAGYGNHGQGEQA 410
+VD + G + A F R + R + W AL++ HG E A
Sbjct: 416 IVDLMGRAGDLNKAFE-FARAMPERPDSDIWAALLSSCNLHGNVELA 461
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
K ++D++ ++ G ++ ST+ +++ C L S ++V ++ +G + M +
Sbjct: 255 KRSVDMYISMQRAGFHPNI--STFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGS 312
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
+L M+ +CG + DAR++F M E++ SW ++I G +GN EA E F M E +
Sbjct: 313 SLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG---EDSFVACALIDMYSKCGSIEDAQ 279
TF + A + GL++ G +I +++R + AC ++D+ + G + A
Sbjct: 373 NYVTFLGALSACSHSGLVDKGYEIFE-SMQRDYSMKPKMEHYAC-IVDLMGRAGDLNKAF 430
Query: 280 CVFDQMPEKSTVG-WNSIISGYALRGYSEEA 309
MPE+ W +++S L G E A
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNLHGNVELA 461
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 243/447 (54%), Gaps = 3/447 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L+ C L ++ K G ++ +G E ++ +L M+V+CG + +AR++F +
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
D V W +I G +G+ EA F M T A+++ + +E+GR
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+H ++K G+ D+ VA AL+ MY+KC DA+ VF+ EK V WNSIISG++ G
Sbjct: 364 SVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF--GSDIVA 362
EAL ++ M + T++ + CA L SL HA V+ GF S +
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
T L+DFY+K G + AR +FD + KN I+W+A+I GYG G ++E+FE+ML+++
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
PN TF ++LSAC ++G+ G + F SM +D+ P HY CM+++L R G L++A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+I P++P + A L C MH LG+ +K+ + P S YV++ N+Y+S G
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662
Query: 543 KLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+ +A V +K++GL+ + S +E
Sbjct: 663 RWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 230/489 (47%), Gaps = 43/489 (8%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
E + L+++L G D + + C L+ + K++ ++ D ++
Sbjct: 125 EVVKLYDLLMKHGFRYD--DIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTG 181
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
+L M+ +CG + A K+F D+ R+ V W ++I+G V + E F M E G
Sbjct: 182 LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGN 241
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
T+ T++ A L + G+ H C +K G+ S + +L+DMY KCG I +A+ VF+
Sbjct: 242 EYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN 301
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
+ V W ++I GY G EALS++ +M+ K + TI+ V+ C + +LE
Sbjct: 302 EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLEL 361
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
+ H ++ G VAN LV Y+K + DA++VF+ K++++WN++I+G+
Sbjct: 362 GRSVHGLSIKVGIWDTNVAN-ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI--------------- 448
+G +A+ +F +M E V PN VT ++ SAC+ G G +
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 449 --------FYSMSRDHKV---------KPRAMHYACMIELLGREGLLD---EAFALIRSA 488
FY+ D + + + ++ MI G++G E F +
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 489 PVEPTKNMWVALLTACRMHGNLVLGK--FAA-EKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
+P ++ + ++L+AC G + GK F++ K Y P Y +++M + +G+L
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST-KHYTCMVDMLARAGELE 599
Query: 546 EAAGVLKTL 554
+A +++ +
Sbjct: 600 QALDIIEKM 608
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 222/487 (45%), Gaps = 46/487 (9%)
Query: 111 ILELEGDGADV---GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
IL E DG+ + S L++ C + S+R + G + NG D+ + +++ +
Sbjct: 29 ILTEENDGSSLHYAASSPCFLLLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSL 85
Query: 168 HVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTF 227
+ G DAR +F +PE D W ++ + E + + + + F
Sbjct: 86 YGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF 145
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE 287
+ ++A L ++ G++IH C L + D+ V L+DMY+KCG I+ A VF+ +
Sbjct: 146 SKALKACTELQDLDNGKKIH-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITL 204
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQA 347
++ V W S+I+GY EE L ++ MR++ +++T +I C +L++L K
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 348 HAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG 407
H LV+ G T L+D Y K G + +AR VF+ +++ W A+I GY ++G
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV 324
Query: 408 EQAIEMFEQMLRERVIPNHVTFLAVLSAC----------SYSGLSERG--WEIFYS---- 451
+A+ +F++M + PN VT +VLS C S GLS + W+ +
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALV 384
Query: 452 -------MSRDHKV------KPRAMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKN 495
+RD K + + + +I + G + EA L + S V P
Sbjct: 385 HMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV 444
Query: 496 MWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSY-----VMLLNMYSSSGKLMEAAGV 550
+L +AC G+L +G ++ Y ++ G L+S LL+ Y+ G A +
Sbjct: 445 TVASLFSACASLGSLAVG--SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 551 LKTLKRK 557
T++ K
Sbjct: 503 FDTIEEK 509
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/126 (20%), Positives = 60/126 (47%)
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
+ L + G+ + S + ++ +++ +Q+H L +G DI T LV Y
Sbjct: 28 LILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYG 87
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+G +DAR VFD++ + W ++ Y + + + +++++ +++ + + F
Sbjct: 88 FFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSK 147
Query: 432 VLSACS 437
L AC+
Sbjct: 148 ALKACT 153
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 272/485 (56%), Gaps = 18/485 (3%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS-----TYDALVNVCVGLR 137
KPS + L IEK ++ EA+D I +LE A G S + +L+ C LR
Sbjct: 51 KPSPTPLL--IEKQSIHRTQLEALDSV-ITDLE-TSAQKGISLTEPEIFASLLETCYSLR 106
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA--VSWMTL 195
+I RV + +L + ++++ ++ CG A ++F M +RD+ +W +L
Sbjct: 107 AIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSL 166
Query: 196 ISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
ISG + G Y +A + M E+ TF +++A G+G +++G IH +K G
Sbjct: 167 ISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGF 226
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
G D +V AL+ MY+KCG I A+ VFD +P K V WNS+++GY G EAL I+
Sbjct: 227 GYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRL 286
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M +G + D+ IS V+ AR+ S +H +Q H ++R G ++ L+ YSK G+
Sbjct: 287 MVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQ 343
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ A +FD+ML ++ +SWNA+I+ H + ++ FEQM R P+ +TF++VLS
Sbjct: 344 LGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSL 400
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI-RSAPVEPTK 494
C+ +G+ E G +F MS+++ + P+ HYACM+ L GR G+++EA+++I + +E
Sbjct: 401 CANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGP 460
Query: 495 NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+W ALL AC +HGN +G+ AA++L+ +EP ++ +L+ +YS + + + V + +
Sbjct: 461 TVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Query: 555 KRKGL 559
+GL
Sbjct: 521 VDRGL 525
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 188/371 (50%), Gaps = 35/371 (9%)
Query: 227 FATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP 286
FA+++ L I+ G ++H + + ++ L+ +Y+ CG E A VFD+M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 287 EK--STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
++ S WNS+ISGYA G E+A+++Y +M + G K D+FT V++ C + S++
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNH 404
+ H LV+ GFG D+ LV Y+K G + AR+VFD + K+ +SWN+++ GY +H
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 405 GQGEQAIEMFEQMLRERVIPNHVTFLAVLS-ACSYS-GLSERGWEIFYSMSRDHKV---- 458
G +A+++F M++ + P+ V +VL+ S+ G GW I M + V
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANAL 334
Query: 459 -----KPRAMHYACMI--ELLGREGLLDEA--------------FALIRSAPVEPTKNMW 497
K + AC I ++L R+ + A F + A +P +
Sbjct: 335 IVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRANAKPDGITF 394
Query: 498 VALLTACRMHGNLVLGK--FA-AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
V++L+ C G + G+ F+ K YG++P K+ Y ++N+Y +G + EA ++ +
Sbjct: 395 VSVLSLCANTGMVEDGERLFSLMSKEYGIDP-KMEHYACMVNLYGRAGMMEEAYSMI--V 451
Query: 555 KRKGLTMLPTC 565
+ GL PT
Sbjct: 452 QEMGLEAGPTV 462
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 228/402 (56%), Gaps = 3/402 (0%)
Query: 196 ISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
+ GL +G EA +W T+A +++ G++IH+ G
Sbjct: 83 LKGLCVTGRLKEAVG---LLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
+ ++ L+ +Y+ G ++ A +F + + + WN++ISGY +G +E L IY +
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
MR + DQ+T + V R C+ L LEH K+AHA +++ S+I+ ++ LVD Y K
Sbjct: 200 MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSS 259
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
D VFD++ +NVI+W +LI+GYG HG+ + ++ FE+M E PN VTFL VL+A
Sbjct: 260 FSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTA 319
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKN 495
C++ GL ++GWE FYSM RD+ ++P HYA M++ LGR G L EA+ + +P +
Sbjct: 320 CNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPP 379
Query: 496 MWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
+W +LL ACR+HGN+ L + AA K ++P +YV+ N Y+S G A+ V + ++
Sbjct: 380 VWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKME 439
Query: 556 RKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
G+ P S IE++ + + F+ D SH +++IY+KV +
Sbjct: 440 NAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Query: 86 TSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRV 145
T L ++ L + R KEA+ L L G V TY L+ C + KR+
Sbjct: 76 TEKLDKTLKGLCVTGRLKEAVGL-----LWSSGLQVEPETYAVLLQECKQRKEYTKGKRI 130
Query: 146 FGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNY 205
M GF + Y+ ++L ++ G + A LF + RD + W +ISG V G
Sbjct: 131 HAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLE 190
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACAL 265
E + M + TFA++ RA + L +E G++ H+ +KR + + V AL
Sbjct: 191 QEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSAL 250
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
+DMY KC S D VFDQ+ ++ + W S+ISGY G E L + +M++ G + +
Sbjct: 251 VDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNP 310
Query: 326 FTISIVIRICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDA-RHVF 383
T +V+ C ++ + ++ R +G + +VD + GR+++A V
Sbjct: 311 VTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVM 370
Query: 384 DRMLRKNVISWNALIAGYGNHGQ 406
+++ W +L+ HG
Sbjct: 371 KSPCKEHPPVWGSLLGACRIHGN 393
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 275 bits (702), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/463 (33%), Positives = 251/463 (54%), Gaps = 8/463 (1%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
+ D+ +T +++ VC L+ + + V + + + N +++M+++CG M +
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR--TFATMVRAS 234
AR +F M RD ++W +I+G + G+ A E LC +F R T A++V
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALE--LCRLMQFEGVRPNAVTIASLVSVC 329
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
+ G+ +H A+++ V D + +LI MY+KC ++ VF + T W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+II+G +AL ++ MR + + T++ ++ A LA L A H L +
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT 449
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFD----RMLRKNVISWNALIAGYGNHGQGEQA 410
GF S + A TGLV YSK G +E A +F+ + K+V+ W ALI+GYG HG G A
Sbjct: 450 GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
Query: 411 IEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE 470
+++F +M+R V PN +TF + L+ACS+SGL E G +F M +K R+ HY C+++
Sbjct: 510 LQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVD 569
Query: 471 LLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSS 530
LLGR G LDEA+ LI + P EPT +W ALL AC H N+ LG+ AA KL+ +EP +
Sbjct: 570 LLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGN 629
Query: 531 YVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
YV+L N+Y++ G+ + V ++ GL P S IE++
Sbjct: 630 YVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 212/446 (47%), Gaps = 24/446 (5%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
Y +L+N +SI K + ++I+ G ++++ + + CG + ARKLF +MP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE----FNDGRSRTFATMVRASAGLGLIE 241
+ +S+ +I V G Y +A F+ M E DG + F + +A+ L ++
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF--VAKAAGELKSMK 134
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+G +H L+ G D +V AL+ MY G +E A+ VFD M + + WN++ISGY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
GY +AL ++ M + +D TI ++ +C L LE + H + G I
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
LV+ Y K GRM++AR VFDRM R++VI+W +I GY G E A+E+ M E
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 422 VIPNHVTFLAVLSACSYS-----GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG 476
V PN VT +++S C + G GW + + D ++ +I + +
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE------TSLISMYAKCK 368
Query: 477 LLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV---LGKFAAEKLYGMEPGKLSSYVM 533
+D F + A T W A++ C + LV LG F + +EP +++
Sbjct: 369 RVDLCFRVFSGASKYHT-GPWSAIIAGC-VQNELVSDALGLFKRMRREDVEP-NIATLNS 425
Query: 534 LLNMYSSSGKLMEAAGVLKTLKRKGL 559
LL Y++ L +A + L + G
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGF 451
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 223/496 (44%), Gaps = 47/496 (9%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y +A+ +F + EG G TY + L+S++ V G ++ + F D Y+
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N +L M++ G + AR +F M RD +SW T+ISG +G +A F M E D
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
T +M+ L +E+GR +H ++ +G+ V AL++MY KCG +++A+ V
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
FD+M + + W +I+GY G E AL + M+ G + + TI+ ++ +C +
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
K H VR SDI+ T L+ Y+K R++ VF + + W+A+IAG
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVT----------------------------FLAVL 433
+ A+ +F++M RE V PN T F++ L
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSL 455
Query: 434 SACS-----YS--GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREG----LLDEAF 482
A + YS G E +IF + HK K + + +I G G L
Sbjct: 456 DAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVL-WGALISGYGMHGDGHNALQVFM 514
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHG----NLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
++RS V P + + + L AC G L L +F E + + + Y ++++
Sbjct: 515 EMVRSG-VTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL--ARSNHYTCIVDLL 571
Query: 539 SSSGKLMEAAGVLKTL 554
+G+L EA ++ T+
Sbjct: 572 GRAGRLDEAYNLITTI 587
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/509 (29%), Positives = 280/509 (55%), Gaps = 13/509 (2%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
K+G R+ + D +K + S S + + +A+++F +E+ G D
Sbjct: 108 KLGPGMRETRRVFDGRFVKDAIS-WTSMMSGYVTGKEHVKALEVF--VEMVSFGLDANEF 164
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T + V C L +R + G +I++GFE + ++ + + +++ +DAR++F +M
Sbjct: 165 TLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM 224
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE---FNDGRSRTFATMVRASAGLGLIE 241
PE D + W ++S + Y EA F M DG TF T++ A L ++
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS--TFGTVLTACGNLRRLK 282
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
G++IH + G+G + V +L+DMY KCGS+ +A+ VF+ M +K++V W++++ GY
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
G E+A+ I+ EM + D + V++ CA LA++ K+ H VR G +++
Sbjct: 343 QNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+ L+D Y K G ++ A V+ +M +N+I+WNA+++ +G+GE+A+ F M+++
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
+ P++++F+A+L+AC ++G+ + G F M++ + +KP HY+CMI+LLGR GL +EA
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLV-LGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
L+ A ++W LL C + + + + A+++ +EP SYV+L NMY +
Sbjct: 519 ENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKA 578
Query: 541 SGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
G+ +A + K + R+G+ SWI+
Sbjct: 579 IGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 129/303 (42%), Gaps = 49/303 (16%)
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR-MEDARHVFDRMLRK 389
+++ C ++ S H Q HA +V+ G +D L+ Y K G M + R VFD K
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG---- 445
+ ISW ++++GY + +A+E+F +M+ + N T + + ACS G G
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFH 186
Query: 446 ---------WEIF--------YSMSR---------DHKVKPRAMHYACMIELLGREGLLD 479
W F Y ++R D +P + + ++ + L +
Sbjct: 187 GVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYE 246
Query: 480 EA----FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM-- 533
EA +A+ R + P + + +LTAC L GK KL + G S+ V+
Sbjct: 247 EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL--ITNGIGSNVVVES 304
Query: 534 -LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
LL+MY G + EA V + +K + SW + C + H + EI++
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKN-----SVSWSAL----LGGYCQNGEHEKAIEIFR 355
Query: 593 KVD 595
+++
Sbjct: 356 EME 358
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 248/448 (55%), Gaps = 21/448 (4%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ C GLR I+ V G+++ GFE ++Y+ +LHM++ CG + ++F D+
Sbjct: 109 TFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P+ + V+W +LISG V++ +++A E F M ++ A I G+
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 245 QIHSCALKRGVGEDSF----------VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
H +G+G D + +A +LIDMY+KCG + A+ +FD MPE++ V WN
Sbjct: 229 WFH--GFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
SII+GY+ G +EEAL ++L+M D G D+ T VIR + + HA + +
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
GF D LV+ Y+K G E A+ F+ + +K+ I+W +I G +HG G +A+ +F
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF 406
Query: 415 EQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
++M + P+ +T+L VL ACS+ GL E G F M H ++P HY CM+++L
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 474 REGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM--EPGKLSS- 530
R G +EA L+++ PV+P N+W ALL C +H NL L +++ M EP +L S
Sbjct: 467 RAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLEL----TDRIRSMVAEPEELGSG 522
Query: 531 -YVMLLNMYSSSGKLMEAAGVLKTLKRK 557
YV+L N+Y+ +G+ + + +++K K
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESMKSK 550
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 20/285 (7%)
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG---SIEDAQCVFDQMPEKSTVGWNS 295
L+E+ Q+H +K V + LID + C ++ A+ VF+ + S WNS
Sbjct: 19 LVEL-NQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNS 77
Query: 296 IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
+I GY+ ++AL Y EM G D FT V++ C+ L ++ H +V+ G
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFE 415
F ++ +T L+ Y G + VF+ + + NV++W +LI+G+ N+ + AIE F
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 197
Query: 416 QMLRERVIPNHVTFLAVLSACS-----------YSGLSERGWEIFYSMSRDHKVKPRAMH 464
+M V N + +L AC + L G++ ++ KV +
Sbjct: 198 EMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQ----SKVGFNVIL 253
Query: 465 YACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
+I++ + G L A L P E T W +++T +G+
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIITGYSQNGD 297
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 266/504 (52%), Gaps = 28/504 (5%)
Query: 108 LFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
F E++ G TY L+ C G + VK + ++ G D+Y+ N ++
Sbjct: 102 FFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDC 161
Query: 168 HVRCGLM--LDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF-------LCMWEE 218
+ RCG + DA KLF M ERD VSW +++ GLV +G +A F L W
Sbjct: 162 YSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNT 221
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM-YSKCGSIED 277
DG +A S L E + E + V+ + + M YSK G +E
Sbjct: 222 MLDG----YARCREMSKAFELFE------------KMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 278 AQCVFDQMP--EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
A+ +FD+MP K+ V W II+GYA +G +EA + +M SG K D + ++ C
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
L + H+ L R GS+ L+D Y+K G ++ A VF+ + +K+++SWN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
++ G G HG G++AIE+F +M RE + P+ VTF+AVL +C+++GL + G + FYSM +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF 515
+ + P+ HY C+++LLGR G L EA ++++ P+EP +W ALL ACRMH + + K
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 516 AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPY 575
+ L ++P +Y +L N+Y+++ A + +K G+ S +E++ +
Sbjct: 506 VLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIH 565
Query: 576 AFLCGDKSHTQTKEIYQKVDNLMD 599
F DKSH ++ +IYQ + +L++
Sbjct: 566 EFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 154/355 (43%), Gaps = 46/355 (12%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+Q+H+ ++R + ED +A LI S C A VF+Q+ E + NS+I +A
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
+A ++ EM+ G D FT +++ C+ + L K H + + G SDI
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 364 TGLVDFYS---------------------------------KWGRMEDARHVFDRMLRKN 390
L+D YS K G + DAR +FD M +++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 450
+ISWN ++ GY + +A E+FE+M ER N V++ ++ S +G E +F
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKM-PER---NTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 451 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK---NMWVALLTACRMH 507
M K + + +I +GLL EA L+ K +++L AC
Sbjct: 272 KMPLPAK---NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 508 GNLVLGKFAAEKLYGMEPGKLSSYVM--LLNMYSSSGKLMEAAGVLKTLKRKGLT 560
G L LG L G ++YV+ LL+MY+ G L +A V + +K L
Sbjct: 329 GLLSLGMRIHSILKRSNLGS-NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 275/498 (55%), Gaps = 13/498 (2%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
+G ++ ++ +++ C ++ +++ G I G+E L + N ++ + +CG++
Sbjct: 270 EGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEA 329
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
+ +F M ER+ VSW T+IS N +A FL M + TF ++ A
Sbjct: 330 VKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKC 384
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
I+ G +IH +K G + V + I +Y+K ++EDA+ F+ + + + WN++
Sbjct: 385 NEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAM 444
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA--RLASLEHAKQAHAALVRH 354
ISG+A G+S EAL ++L + +++T V+ A S++ ++ HA L++
Sbjct: 445 ISGFAQNGFSHEALKMFLSAA-AETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
G S V ++ L+D Y+K G ++++ VF+ M +KN W ++I+ Y +HG E + +F
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
+M++E V P+ VTFL+VL+AC+ G+ ++G+EIF M + ++P HY+CM+++LGR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 475 EGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVML 534
G L EA L+ P P ++M ++L +CR+HGN+ +G AE M+P SYV +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683
Query: 535 LNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP-----YAFLCGDKSHTQTKE 589
N+Y+ + +AA + K +++K ++ SWI+V F GDKSH ++ E
Sbjct: 684 YNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDE 743
Query: 590 IYQKVDNLMDEISRHGYI 607
IY+ V+ + E++ G +
Sbjct: 744 IYRMVEIIGLEMNLEGKV 761
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 198/402 (49%), Gaps = 9/402 (2%)
Query: 111 ILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVR 170
++ ++ G TY ++ CVG ++ ++ G E DL + N + M+ R
Sbjct: 162 VVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR 221
Query: 171 CGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA-EAFEQFLCMWEEFNDGRSRTFAT 229
G AR++F +M +D +SW +L+SGL G + EA F M E + +F +
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTS 281
Query: 230 MVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKS 289
++ +++ RQIH +KRG V L+ YSKCG +E + VF QM E++
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 290 TVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHA 349
V W ++IS ++A+SI+L MR G ++ T +I ++ + H
Sbjct: 342 VVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQ 409
++ GF S+ + Y+K+ +EDA+ F+ + + +ISWNA+I+G+ +G +
Sbjct: 397 LCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHE 456
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYS-GLSERGWEIFYSMSRDHKVKPRAMHYACM 468
A++MF E +PN TF +VL+A +++ +S + + ++ + + + +
Sbjct: 457 ALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSAL 515
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
+++ + G +DE+ + + + +W ++++A HG+
Sbjct: 516 LDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDF 556
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 170/327 (51%), Gaps = 19/327 (5%)
Query: 130 VNVCVGLRSIRG-VKR---VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
V +C+ L++ RG +KR + G+ ++GF + + N V+ M+ + G +A +F ++
Sbjct: 79 VTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLV 138
Query: 186 ERDAVSWMTLISGLVDSG---NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV 242
+ D VSW T++SG D+ N+ + +++ F T++T + G +
Sbjct: 139 DPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAF------TYSTALSFCVGSEGFLL 192
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
G Q+ S +K G+ D V + I MYS+ GS A+ VFD+M K + WNS++SG +
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 303 RG-YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
G + EA+ I+ +M G ++D + + VI C L+ A+Q H ++ G+ S +
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
L+ YSK G +E + VF +M +NV+SW +I+ + A+ +F M +
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDG 367
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEI 448
V PN VTF+ +++A + + G +I
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKI 394
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 6/263 (2%)
Query: 177 ARKLFADMPERDAVSWMT-LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRA-S 234
A KLF +R+A + + IS + + A A F + GR T+ A
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
A G ++ G QIH + G V+ A++ MY K G ++A C+F+ + + V WN
Sbjct: 87 ACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+I+SG+ ++ AL+ + M+ +G D FT S + C Q + +V+
Sbjct: 147 TILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQ-GEQAIEM 413
G SD+V + YS+ G AR VFD M K++ISWN+L++G G G +A+ +
Sbjct: 204 GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVI 263
Query: 414 FEQMLRERVIPNHVTFLAVLSAC 436
F M+RE V +HV+F +V++ C
Sbjct: 264 FRDMMREGVELDHVSFTSVITTC 286
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/617 (28%), Positives = 308/617 (49%), Gaps = 57/617 (9%)
Query: 46 FSQIRCSSSMEQGLRPKP---KKI---------GHVERKVPVLEDAHVMKPSTSGLCSQI 93
F Q+ S S+ +G+ P P KK+ GHV + + +P + I
Sbjct: 50 FKQLH-SQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLF--VKIPEPDVVVWNNMI 106
Query: 94 EKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV----KRVFGYM 149
+ + + E + L+ L + +G T+ L+N GL+ G K++ ++
Sbjct: 107 KGWSKVDCDGEGVRLY--LNMLKEGVTPDSHTFPFLLN---GLKRDGGALACGKKLHCHV 161
Query: 150 ISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF 209
+ G +LY+ N ++ M+ CGLM AR +F + D SW +ISG Y E+
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIH----------SCALKRGVGEDS 259
E + M S T ++ A + + ++ +++H S L+ + ++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL-VNA 280
Query: 260 FVACALIDM----------------------YSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
+ AC +D+ Y + G+++ A+ FDQMP + + W +I
Sbjct: 281 YAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMI 340
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
GY G E+L I+ EM+ +G D+FT+ V+ CA L SLE + + ++
Sbjct: 341 DGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK 400
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+D+V L+D Y K G E A+ VF M +++ +W A++ G N+GQG++AI++F QM
Sbjct: 401 NDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQM 460
Query: 418 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 477
+ P+ +T+L VLSAC++SG+ ++ + F M DH+++P +HY CM+++LGR GL
Sbjct: 461 QDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGL 520
Query: 478 LDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNM 537
+ EA+ ++R P+ P +W ALL A R+H + + + AA+K+ +EP + Y +L N+
Sbjct: 521 VKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNI 580
Query: 538 YSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
Y+ + + V + + + P S IEV + F+ GDKSH Q++EIY K++ L
Sbjct: 581 YAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEEL 640
Query: 598 MDEISRHGYIEEHEMLL 614
E + Y+ + LL
Sbjct: 641 AQESTFAAYLPDTSELL 657
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 239/421 (56%), Gaps = 2/421 (0%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
M +GF+P+ VL R G + R++F+ +P+ +W ++SG + +Y EA
Sbjct: 341 MRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEA 400
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F M + T + ++ + A L +E G+QIH ++ + ++S + LI +
Sbjct: 401 ISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAV 460
Query: 269 YSKCGSIEDAQCVFDQ-MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI-DQF 326
YS+C +E ++C+FD + E WNS+ISG+ +AL ++ M + ++
Sbjct: 461 YSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET 520
Query: 327 TISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM 386
+ + V+ C+RL SL H +Q H +V+ G+ SD T L D Y K G ++ AR FD +
Sbjct: 521 SFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV 580
Query: 387 LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
LRKN + WN +I GYG++G+G++A+ ++ +M+ P+ +TF++VL+ACS+SGL E G
Sbjct: 581 LRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGL 640
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRM 506
EI SM R H ++P HY C+++ LGR G L++A L + P + + +W LL++CR+
Sbjct: 641 EILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRV 700
Query: 507 HGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCS 566
HG++ L + AEKL ++P ++YV+L N YSS + ++A + + + + P S
Sbjct: 701 HGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Query: 567 W 567
W
Sbjct: 761 W 761
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 193/409 (47%), Gaps = 55/409 (13%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM------------------ 184
K + G+++ G + D Y+ NR+L +++ CG ARK+F +M
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 185 -------------PERDAVSWMTLISGLVDSGNYAEA---FEQFLCMWEEFNDGRSRTFA 228
PERD VSW +IS LV G +A +++ +C + F R T A
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVC--DGFLPSRF-TLA 142
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC-VFDQMPE 287
+++ A + + G + H A+K G+ ++ FV AL+ MY+KCG I D VF+ + +
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRI------CARLASL 341
+ V + ++I G A EA+ ++ M + G ++D +S ++ I C L+ +
Sbjct: 203 PNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEI 262
Query: 342 ---EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALI 398
E KQ H +R GFG D+ N L++ Y+K M A +F M NV+SWN +I
Sbjct: 263 YGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI 322
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 458
G+G + ++++E +M PN VT ++VL AC SG E G IF S+
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP----- 377
Query: 459 KPRAMHYACMIELLGREGLLDEAFALIRS---APVEPTKNMWVALLTAC 504
+P + M+ +EA + R ++P K +L++C
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCG------------SIEDA---------QC- 280
G+ IH ++ G+ D+++ L+D+Y +CG S+ D +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 281 ---------VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
VFD MPE+ V WN++IS +G+ E+AL +Y M G +FT++ V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED-ARHVFDRMLRKN 390
+ C+++ + H V+ G +I L+ Y+K G + D VF+ + + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+S+ A+I G + +A++MF M + V + V +LS
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+++ +++ C L S+ ++ G ++ +G+ D ++ + M+ +CG + AR+ F
Sbjct: 520 TSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 579
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ ++ V W +I G +G EA + M TF +++ A + GL+E G
Sbjct: 580 VLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETG 639
Query: 244 RQIHSCALKR--GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISGY 300
+I S +++R G+ + ++D + G +EDA+ + + P K S+V W ++S
Sbjct: 640 LEILS-SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 301 ALRG 304
+ G
Sbjct: 699 RVHG 702
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 14/227 (6%)
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
K H +VR G SD L+D Y + G + AR VFD M ++V SWNA +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
G +A E+F+ M V V++ ++S G E+ ++ M D + P
Sbjct: 85 VGDLGEACEVFDGMPERDV----VSWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRF 139
Query: 464 HYACMIELLGREGLLDEAFALIRSAPVEPT---KNMWV--ALLTACRMHGNLVLGKFAAE 518
A ++ + +LD F + T KN++V ALL+ G +V +
Sbjct: 140 TLASVLSACSK--VLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV--DYGVR 195
Query: 519 KLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTC 565
+ SY ++ + K++EA + + + KG+ + C
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVC 242
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/489 (31%), Positives = 266/489 (54%), Gaps = 5/489 (1%)
Query: 102 YKEAMDLFEILEL----EGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPD 157
Y ++ EIL+L GDG T+ A ++V + + + + ++ GF+ D
Sbjct: 220 YASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
+++ ++ M+++CG + ++ +P +D V W +ISGL+ G +A F M +
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+D S A++V + A LG ++G +H L+ G D+ +LI MY+KCG ++
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR-DSGAKIDQFTISIVIRICA 336
+ +F++M E+ V WN+IISGYA +AL ++ EM+ + ++D FT+ +++ C+
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
+L K H ++R + +T LVD YSK G +E A+ FD + K+V+SW
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
LIAGYG HG+G+ A+E++ + L + PNHV FLAVLS+CS++G+ ++G +IF SM RD
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDF 579
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
V+P H AC+++LL R +++AF + P+ ++ +L ACR +G +
Sbjct: 580 GVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDII 639
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYA 576
E + ++PG YV L + +++ + + + ++ GL LP S IE+ +
Sbjct: 640 CEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTT 699
Query: 577 FLCGDKSHT 585
F SH+
Sbjct: 700 FFMNHTSHS 708
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 204/423 (48%), Gaps = 9/423 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ +L+ C L+ + + ++ NGF D Y+ + +++++ + GL+ ARK+F +M
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
ERD V W +I +G EA + E G T++ +G+ I +
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACS---LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ 164
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+H A+ G D V +++++Y KC + DA+ +FDQM ++ V WN++ISGYA G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
E L + MR G + DQ T + + + LE + H +V+ GF D+ T
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+ Y K G+ E + V + + K+V+ W +I+G G+ E+A+ +F +ML+
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 425 NHVTFLAVLSACSYSGLSERGWEIF-YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
+ +V+++C+ G + G + Y + + + A++ +I + + G LD++
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN--SLITMYAKCGHLDKSLV 402
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSY--VMLLNMYSSS 541
+ E W A+++ + +L E++ ++ S+ V LL SS+
Sbjct: 403 IFERMN-ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461
Query: 542 GKL 544
G L
Sbjct: 462 GAL 464
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 151/319 (47%), Gaps = 10/319 (3%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLC--SQIEKLALCNRYKEAMDLFEILELEGDGADVG 122
K G E VLE P+ +C I L R ++A+ +F E+ G+D+
Sbjct: 292 KCGKEEASYRVLETI----PNKDVVCWTVMISGLMRLGRAEKALIVFS--EMLQSGSDLS 345
Query: 123 GSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA 182
++V C L S V GY++ +G+ D +N ++ M+ +CG + + +F
Sbjct: 346 SEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE 405
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM-WEEFNDGRSRTFATMVRASAGLGLIE 241
M ERD VSW +ISG + + +A F M ++ S T ++++A + G +
Sbjct: 406 RMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALP 465
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
VG+ IH ++ + S V AL+DMYSKCG +E AQ FD + K V W +I+GY
Sbjct: 466 VGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYG 525
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR-HGFGSDI 360
G + AL IY E SG + + V+ C+ ++ + +++VR G +
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNH 585
Query: 361 VANTGLVDFYSKWGRMEDA 379
+VD + R+EDA
Sbjct: 586 EHLACVVDLLCRAKRIEDA 604
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%)
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQA 347
ST +NS I+ + G ++ LS + M + D FT +++ CA L L
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSI 68
Query: 348 HAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG 407
H ++ +GF SD ++ LV+ Y+K+G + AR VF+ M ++V+ W A+I Y G
Sbjct: 69 HQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIV 128
Query: 408 EQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+A + +M + + P VT L +LS
Sbjct: 129 GEACSLVNEMRFQGIKPGPVTLLEMLSG 156
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 255/501 (50%), Gaps = 31/501 (6%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L VC LR + G+++ E ++ N +HM CG M +ARK+F +
Sbjct: 158 TYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDES 217
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RD VSW LI+G G +A + M E T +V + + LG + G+
Sbjct: 218 PVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+ + + G+ + AL+DM+SKCG I +A+ +FD + +++ V W ++ISGYA G
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 305 Y-------------------------------SEEALSIYLEMRDSGAKIDQFTISIVIR 333
++AL+++ EM+ S K D+ T+ +
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 334 ICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS 393
C++L +L+ H + ++ ++ T LVD Y+K G + +A VF + +N ++
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT 457
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 453
+ A+I G HG AI F +M+ + P+ +TF+ +LSAC + G+ + G + F M
Sbjct: 458 YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMK 517
Query: 454 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG 513
+ P+ HY+ M++LLGR GLL+EA L+ S P+E +W ALL CRMHGN+ LG
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
+ AA+KL ++P YV+L MY + +A + + +G+ +P CS IEV
Sbjct: 578 EKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGI 637
Query: 574 PYAFLCGDKSHTQTKEIYQKV 594
F+ DKS ++++IY ++
Sbjct: 638 VCEFIVRDKSRPESEKIYDRL 658
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 214/489 (43%), Gaps = 81/489 (16%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGL----MLD-ARKLFADMPERDAVSWMTLI 196
+K++ MI NG D + +R++ C L LD + K+ + + SW I
Sbjct: 69 LKQIQAQMIINGLILDPFASSRLIAF---CALSESRYLDYSVKILKGIENPNIFSWNVTI 125
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIEVGRQIHSCALK 252
G +S N E+F + M SR T+ + + A L L +G I LK
Sbjct: 126 RGFSESENPKESFLLYKQMLRH-GCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 253 RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
+ S V A I M++ CG +E+A+ VFD+ P + V WN +I+GY G +E+A+ +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
Y M G K D T+ ++ C+ L L K+ + + +G I L+D +SK
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHG--------------------------- 405
G + +AR +FD + ++ ++SW +I+GY G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 406 ----QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-----YSMSRD- 455
+G+ A+ +F++M P+ +T + LSACS G + G I YS+S +
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 456 -----------------------HKVKPR-AMHYACMIELLGREGLLDEA---FALIRSA 488
H ++ R ++ Y +I L G A F + A
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 489 PVEPTKNMWVALLTACRMHGNLVLGK--FAAEK-LYGMEPGKLSSYVMLLNMYSSSGKLM 545
+ P + ++ LL+AC G + G+ F+ K + + P +L Y +++++ +G L
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP-QLKHYSIMVDLLGRAGLLE 543
Query: 546 EAAGVLKTL 554
EA +++++
Sbjct: 544 EADRLMESM 552
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 19/357 (5%)
Query: 64 KKIGHVERKVPV--LEDAHVMKP---STSGLCSQIEKLALCNRYKEAMDLFEILELEGDG 118
KKIG E+ + V L ++ +KP + GL S L NR KE + ++ +G
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY-----VKENG 287
Query: 119 ADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDAR 178
+ +AL+++ I +R+F N + + ++ + RCGL+ +R
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIF----DNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 179 KLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLG 238
KLF DM E+D V W +I G V + +A F M T + A + LG
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
++VG IH K + + + +L+DMY+KCG+I +A VF + ++++ + +II
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL-VRHGFG 357
G AL G + A+S + EM D+G D+ T ++ C ++ + + + R
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG---YGNHGQGEQA 410
+ + +VD + G +E+A + + M + + W AL+ G +GN GE+A
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKA 580
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/486 (32%), Positives = 264/486 (54%), Gaps = 52/486 (10%)
Query: 168 HVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA---FEQFLCMWEEFNDGRS 224
H+ L+ +A K+F ++PE D +S +I V + EA F++ LC+ N+
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEF-- 94
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
TF T++ +S +++G+Q+H ALK G+ + FV A+++ Y K ++ DA+ FD
Sbjct: 95 -TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 285 -------------------------------MPEKSTVGWNSIISGYALRGYSEEALSIY 313
MPE+S V WN++I G++ G +EEA++ +
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 314 LEMRDSGAKI-DQFTISIVIRICARLASLEHAKQAHAALVRH-GFGSDIVANTGLVDFYS 371
++M G I ++ T I + +AS K HA ++ G ++ L+ FYS
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 372 KWGRMEDARHVFDRML--RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVT 428
K G MED+ F+++ ++N++SWN++I GY ++G+GE+A+ MFE+M+++ + PN+VT
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM---HYACMIELLGREGLLDEAFALI 485
L VL AC+++GL + G+ F D+ P + HYACM+++L R G EA LI
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELI 392
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
+S P++P W ALL C++H N L K AA K+ ++P +SSYVML N YS+
Sbjct: 393 KSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQ 452
Query: 546 EAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHG 605
+ + + +K GL CSWIEV+ Q F+ DK++ E+Y+ ++ +S+H
Sbjct: 453 NVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYR----MLALVSQH- 507
Query: 606 YIEEHE 611
+EE+E
Sbjct: 508 -LEENE 512
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 147/337 (43%), Gaps = 62/337 (18%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD- 183
T+ ++ R ++ K++ Y + G ++++ + VL+ +V+ + DAR+ F D
Sbjct: 95 TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT 154
Query: 184 ------------------------------MPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
MPER V+W +I G +G EA F+
Sbjct: 155 RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFV 214
Query: 214 CMWEE-FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALK-RGVGEDSFVACALIDMYSK 271
M E TF + A + + G+ IH+CA+K G + FV +LI YSK
Sbjct: 215 DMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSK 274
Query: 272 CGSIEDAQCVFDQMPE--KSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTI 328
CG++ED+ F+++ E ++ V WNS+I GYA G EEA++++ +M +D+ + + TI
Sbjct: 275 CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTI 334
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGS--------------DIVANTGLVDFYSKWG 374
V+ C HA L++ G+ ++ +VD S+ G
Sbjct: 335 LGVLFAC-----------NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSG 383
Query: 375 RMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQA 410
R ++A + M L + W AL+ G H A
Sbjct: 384 RFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLA 420
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 269/527 (51%), Gaps = 20/527 (3%)
Query: 78 DAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLR 137
DA SG C +A LF + L D T L+ +
Sbjct: 117 DATTWNAMLSGFCQS-------GHTDKAFSLFREMRLNEITPD--SVTVMTLIQSASFEK 167
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA--DMPERDAVSWMTL 195
S++ ++ + I G + + + N + + +CG + A+ +F D +R VSW ++
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSM 227
Query: 196 ISGLVDSGNYAEAFEQF----LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL 251
+ EAF+ F L + EEF S TF + + + GR IHS A+
Sbjct: 228 FKAY---SVFGEAFDAFGLYCLMLREEFKPDLS-TFINLAASCQNPETLTQGRLIHSHAI 283
Query: 252 KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
G +D I MYSK A+ +FD M ++ V W +ISGYA +G +EAL+
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD-IVANTGLVDFY 370
++ M SG K D T+ +I C + SLE K A +G D ++ L+D Y
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMY 403
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
SK G + +AR +FD K V++W +IAGY +G +A+++F +M+ PNH+TFL
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFL 463
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
AVL AC++SG E+GWE F+ M + + + P HY+CM++LLGR+G L+EA LIR+
Sbjct: 464 AVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSA 523
Query: 491 EPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
+P +W ALL AC++H N+ + + AAE L+ +EP + YV + N+Y+++G A +
Sbjct: 524 KPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARI 583
Query: 551 LKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
+K++ + P S I+V + ++F G+ H + + IY ++ L
Sbjct: 584 RSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGL 630
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 217/497 (43%), Gaps = 40/497 (8%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
NR L E++ G + T+ + C L + + V ++I + F D++
Sbjct: 29 NRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVF 88
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
+ + M V+C + A K+F MPERDA +W ++SG SG+ +AF F M
Sbjct: 89 VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
S T T++++++ +++ +H+ ++ GV VA I Y KCG ++ A+
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAK 208
Query: 280 CVFDQMP--EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
VF+ + +++ V WNS+ Y++ G + +A +Y M K D T + C
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+L + H+ + G DI A + YSK AR +FD M + +SW +
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-----FYSM 452
I+GY G ++A+ +F M++ P+ VT L+++S C G E G I Y
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 453 SRDHKVKPRA---MHYAC-----------------------MIELLGREGLLDEAFALIR 486
RD+ + A M+ C MI G+ EA L
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 487 SA---PVEPTKNMWVALLTACRMHGNLVLG---KFAAEKLYGMEPGKLSSYVMLLNMYSS 540
+P ++A+L AC G+L G +++Y + PG L Y ++++
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG-LDHYSCMVDLLGR 507
Query: 541 SGKLMEAAGVLKTLKRK 557
GKL EA +++ + K
Sbjct: 508 KGKLEEALELIRNMSAK 524
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 180/411 (43%), Gaps = 37/411 (9%)
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCA 250
+W I V+ + E+ F M + + TF + +A A L + +H+
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEAL 310
+K D FV A +DM+ KC S++ A VF++MPE+ WN+++SG+ G++++A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFY 370
S++ EMR + D T+ +I+ + SL+ + HA +R G + + Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 371 SKWGRMEDARHVFDRMLR--KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
K G ++ A+ VF+ + R + V+SWN++ Y G+ A ++ MLRE P+ T
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 429 FLAVLSACSYSGLSERGWEI---------------------FYSMSRDH---------KV 458
F+ + ++C +G I YS S D
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 459 KPRAMHYACMIELLGREGLLDEAFALIRS---APVEPTKNMWVALLTACRMHGNLVLGKF 515
+ + MI +G +DEA AL + + +P ++L++ C G+L GK+
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 516 --AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT 564
A +YG + + L++MYS G + EA + K + T
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 79/150 (52%)
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAH 348
S WN I R E+L ++ EM+ G + + FT V + CARLA + + H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 349 AALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGE 408
A L++ F SD+ T VD + K ++ A VF+RM ++ +WNA+++G+ G +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
+A +F +M + P+ VT + ++ + S+
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASF 165
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/492 (31%), Positives = 259/492 (52%), Gaps = 5/492 (1%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
++A++LF +E G + + ++ C L + K + + GFE D Y+ +
Sbjct: 190 EKALELFG--RMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+ +C + AR++F MP + V+W ++I G V G+ E M E
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
T +++ A + + G+ IH ++ V D +V C+LID+Y KCG A+ VF
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ + WN +IS Y G +A+ +Y +M G K D T + V+ C++LA+LE
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
KQ H ++ +D + + L+D YSK G ++A +F+ + +K+V+SW +I+ YG
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYG 487
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
+HGQ +A+ F++M + + P+ VT LAVLSAC ++GL + G + F M + ++P
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 463 MHYACMIELLGREGLLDEAFALIRSAPVEPTKN--MWVALLTACRMHGNLVLGKFAAEKL 520
HY+CMI++LGR G L EA+ +I+ P E + N + L +AC +H LG A L
Sbjct: 548 EHYSCMIDILGRAGRLLEAYEIIQQTP-ETSDNAELLSTLFSACCLHLEHSLGDRIARLL 606
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
P S+Y++L N+Y+S A V +K GL P CSWIE+ + F
Sbjct: 607 VENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAE 666
Query: 581 DKSHTQTKEIYQ 592
D+SH + + +Y+
Sbjct: 667 DRSHLRAENVYE 678
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 210/396 (53%), Gaps = 8/396 (2%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
++ +G+ D+ + + ++ M+ + L ++ ++F +MPERD SW T+IS SG +A
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
E F M + S + + A + L +E G++IH +K+G D +V AL+DM
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDM 252
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
Y KC +E A+ VF +MP KS V WNS+I GY +G S+ + I M G + Q T+
Sbjct: 253 YGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTL 312
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ ++ C+R +L H K H ++R +DI N L+D Y K G A VF + +
Sbjct: 313 TSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK 372
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
SWN +I+ Y + G +A+E+++QM+ V P+ VTF +VL ACS E+G +I
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
S+S + +++ + + ++++ + G EAF + S P + + W +++A HG
Sbjct: 433 HLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS-WTVMISAYGSHG 490
Query: 509 NL--VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
L +F + +G++P V LL + S+ G
Sbjct: 491 QPREALYQFDEMQKFGLKPDG----VTLLAVLSACG 522
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 167/311 (53%), Gaps = 14/311 (4%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER-DAVSWMTL 195
+S+R +K V +++ G D+ + +++++ C AR +F + R D W +L
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSL 77
Query: 196 ISGLVDSGNYAEAFEQF-------LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
+SG + + + E F +C+ + F TF +++A LG +GR IH+
Sbjct: 78 MSGYSKNSMFHDTLEVFKRLLNCSICVPDSF------TFPNVIKAYGALGREFLGRMIHT 131
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
+K G D VA +L+ MY+K E++ VFD+MPE+ WN++IS + G +E+
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK 191
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
AL ++ M SG + + ++++ I C+RL LE K+ H V+ GF D N+ LVD
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVD 251
Query: 369 FYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
Y K +E AR VF +M RK++++WN++I GY G + +E+ +M+ E P+ T
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 429 FLAVLSACSYS 439
++L ACS S
Sbjct: 312 LTSILMACSRS 322
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-WNSIISGYAL 302
+ +H L G+ D + +LI++Y C A+ VF+ +S V WNS++SGY+
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 303 RGYSEEALSIYLEMRDSGAKI-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
+ L ++ + + + D FT VI+ L + H +V+ G+ D+V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+ LV Y+K+ E++ VFD M ++V SWN +I+ + G+ E+A+E+F +M
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEI 448
PN V+ +SACS ERG EI
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEI 230
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 168/591 (28%), Positives = 283/591 (47%), Gaps = 76/591 (12%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y+ A++L+ + G D G ++ C L + +I G + +L+++
Sbjct: 139 YENALELYRGMRQRGLTGD--GYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVV 196
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS------------------- 202
N +L ++ + G M DA LF +MP R+ +SW +I G
Sbjct: 197 NELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK 256
Query: 203 ----------------GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
G + + + F M N A A L + + ++
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYS 306
H +K G E ALI +Y K G ++DA+ +F Q+ K WNS+I+ + G
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 307 EEALSIYLEMRD---------------------------------------SGAKIDQFT 327
+EALS++ E+ + S + T
Sbjct: 377 DEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVT 436
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
I ++ ICA L +L ++ H ++R +I+ LV+ Y+K G + + VF+ +
Sbjct: 437 ICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIR 496
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
K++ISWN++I GYG HG E+A+ MF++M+ P+ + +AVLSACS++GL E+G E
Sbjct: 497 DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGRE 556
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
IFYSMS+ ++P+ HYAC+++LLGR G L EA ++++ P+EP + ALL +CRMH
Sbjct: 557 IFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMH 616
Query: 508 GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
N+ + + A +L +EP + SY++L N+YS+ G+ E+A V K+K L + SW
Sbjct: 617 KNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSW 676
Query: 568 IEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVD 618
IEVKK+ Y F G ++ + IY +++L+ + + G + D+D
Sbjct: 677 IEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLD 727
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 42/345 (12%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRG 141
KP S + + C ++++ + F ++ + G+ V G +VC L ++
Sbjct: 255 FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNA--VSGEALAVFFSVCAELEALSI 312
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
++V GY+I GFE L N ++H++ + G + DA LF + + SW +LI+ VD
Sbjct: 313 AEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVD 372
Query: 202 SGNYAEAFEQF---------------LCMWEEFNDG------------------------ 222
+G EA F + W G
Sbjct: 373 AGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLA 432
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
S T ++ A L + +GR+IH ++ + E+ V AL++MY+KCG + + VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ + +K + WNSII GY + G++E+ALS++ M SG D + V+ C+ +E
Sbjct: 493 EAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVE 552
Query: 343 HAKQAHAALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM 386
++ ++ R G +VD + G +++A + M
Sbjct: 553 KGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/543 (22%), Positives = 221/543 (40%), Gaps = 118/543 (21%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
+D L+ +C+ + R V ++S+ + ++ ++ R GL+LDAR +F +
Sbjct: 59 FDHLLGLCLTAQQCRQVHA--QVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVS 116
Query: 186 E---RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV 242
D W +++ V G Y A E + M + G ++RA LG +
Sbjct: 117 LVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL 176
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
R H+ ++ G+ E+ V L+ +Y K G + DA +F +MP ++ + WN +I G++
Sbjct: 177 CRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQ 236
Query: 303 R-----------------------------------GYSEEALSIYLEMRDSGAKIDQFT 327
G E+ L + MR SG +
Sbjct: 237 EYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEA 296
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
+++ +CA L +L A++ H +++ GF + + L+ Y K G+++DA H+F ++
Sbjct: 297 LAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR 356
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE----RVIPNHVTFLAVLSACSYSGLSE 443
K + SWN+LI + + G+ ++A+ +F ++ V N VT+ +V+ C+ G +
Sbjct: 357 NKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIEL--------LGRE-------------------- 475
E F M KV ++ C++ + LGRE
Sbjct: 417 DSLEYFRQMQFS-KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 476 -------GLLDEA---FALIR-------------------------------SAPVEPTK 494
GLL E F IR S+ P
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 495 NMWVALLTACRMHGNLVLGK---FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
VA+L+AC G + G+ ++ K +G+EP + Y ++++ G L EA+ ++
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ-EHYACIVDLLGRVGFLKEASEIV 594
Query: 552 KTL 554
K +
Sbjct: 595 KNM 597
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 142/320 (44%), Gaps = 36/320 (11%)
Query: 244 RQIHS-CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE---KSTVGWNSIISG 299
RQ+H+ L + +A LI +Y++ G + DA+ VF+ + WNSI+
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
G E AL +Y MR G D + + +++R C L + H +++ G +
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKEN 192
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ L+ Y K GRM DA ++F M +N +SWN +I G+ E A+++FE M R
Sbjct: 193 LHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQR 252
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
E P+ VT+ +VLS S G E + F+ M + +
Sbjct: 253 EEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR------------------MSGNAVSG 294
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
EA A+ S E AL A ++HG ++ G F L S L+++Y
Sbjct: 295 EALAVFFSVCAELE-----ALSIAEKVHGYVIKGGFEE---------YLPSRNALIHVYG 340
Query: 540 SSGKLMEAAGVLKTLKRKGL 559
GK+ +A + + ++ KG+
Sbjct: 341 KQGKVKDAEHLFRQIRNKGI 360
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 279/527 (52%), Gaps = 15/527 (2%)
Query: 104 EAMDLFEILELEGDGADVGGS-TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
E+++LF LE G V TY + L+ + ++ G++ N E + ++N
Sbjct: 300 ESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVN 357
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+ RCG + + +F M ERD VSW T+IS V +G E M ++
Sbjct: 358 SLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKI 417
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGV---GEDSFVACALIDMYSKCGSIEDAQ 279
T ++ A++ L E+G+Q H+ +++G+ G +S+ LIDMYSK G I +Q
Sbjct: 418 DYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY----LIDMYSKSGLIRISQ 473
Query: 280 CVFDQ--MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+F+ E+ WNS+ISGY G++E+ ++ +M + + + T++ ++ C++
Sbjct: 474 KLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQ 533
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
+ S++ KQ H +R ++ + LVD YSK G ++ A +F + +N +++ +
Sbjct: 534 IGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTM 593
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I GYG HG GE+AI +F M + P+ +TF+AVLSACSYSGL + G +IF M +
Sbjct: 594 ILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYN 653
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT-KNMWVALLTACRMHGNLVLGKFA 516
++P + HY C+ ++LGR G ++EA+ ++ E +W +LL +C++HG L L +
Sbjct: 654 IQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETV 713
Query: 517 AEKLYGMEPGK-LSSY-VMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP 574
+E+L + GK S Y V+L NMY+ K V + ++ KGL S IE+
Sbjct: 714 SERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYV 773
Query: 575 YAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEEE 621
F+ D+ H + EIY +D L ++ ++ + P ++ +E
Sbjct: 774 NCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLELDE 820
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 199/439 (45%), Gaps = 12/439 (2%)
Query: 81 VMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIR 140
+ KP+T + I N EA+ + ++ + TY + + C ++++
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 141 GVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD------ARKLFADMPERDAVSWMT 194
K V ++I + N +++M+V C D RK+F +M ++ V+W T
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNT 184
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
LIS V +G AEA QF M +F + A + I+ + LK G
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 255 --VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
+D FV + I MY++ G IE ++ VFD E++ WN++I Y E++ +
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 313 YLEMRDSGAKI-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
+LE S + D+ T + + L +E +Q H + ++ IV L+ YS
Sbjct: 305 FLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYS 364
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ G + + VF M ++V+SWN +I+ + +G ++ + + +M ++ +++T A
Sbjct: 365 RCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR-SAPV 490
+LSA S E G + + R ++ M+ + +I++ + GL+ + L S
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIR-QGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSGYA 482
Query: 491 EPTKNMWVALLTACRMHGN 509
E + W ++++ +G+
Sbjct: 483 ERDQATWNSMISGYTQNGH 501
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 9/188 (4%)
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG--AKIDQFTISI 330
G+ + A+ +FD +P+ +TV WN+II G+ EAL Y M+ + D +T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED------ARHVFD 384
++ CA +L+ K H L+R S V + L++ Y D R VFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 385 RMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
M RKNV++WN LI+ Y G+ +A F M+R V P+ V+F+ V A S S S +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS-RSIK 231
Query: 445 GWEIFYSM 452
+FY +
Sbjct: 232 KANVFYGL 239
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 186/426 (43%), Gaps = 56/426 (13%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEA--FEQFLCMWEEFNDGRSRTFATMVRAS 234
AR+LF +P+ V W T+I G + + EA F + F + + T+++ ++A
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDS-FVACALIDMYSKCGSIED------AQCVFDQMPE 287
A ++ G+ +H C L R + S V +L++MY C + D + VFD M
Sbjct: 118 AETKNLKAGKAVH-CHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQA 347
K+ V WN++IS Y G + EA + M K + V + S++ A
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVF 236
Query: 348 HAALVRHG--FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
+ +++ G + D+ + + Y++ G +E +R VFD + +N+ WN +I Y +
Sbjct: 237 YGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 406 QGEQAIEMF-EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP---- 460
++IE+F E + + ++ + VT+L SA S E G + +S++ + P
Sbjct: 297 CLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIV 356
Query: 461 ---RAMHYAC-----------------------MIELLGREGLLDEAFALIRSAPVEPTK 494
M+ C MI + GL DE L+ + K
Sbjct: 357 NSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 416
Query: 495 NMWV---ALLTACRMHGNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSG------K 543
++ ALL+A N +GK L G++ ++SY L++MYS SG K
Sbjct: 417 IDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQK 474
Query: 544 LMEAAG 549
L E +G
Sbjct: 475 LFEGSG 480
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 293/604 (48%), Gaps = 50/604 (8%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
RY +A+D+F + L G + T + V+ C L+ I V + GF D+ +
Sbjct: 333 RY-QALDMFRKMFLAGVVPN--AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
N ++ M+ +CG + DARK+F + +D +W ++I+G +G +A+E F M +
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
T+ TM+ G I+ G + GE A L K G +
Sbjct: 450 RPNIITWNTMIS-----GYIKNGDE----------GE----AMDLFQRMEKDGKV----- 485
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
+++T WN II+GY G +EAL ++ +M+ S + TI ++ CA L
Sbjct: 486 ------QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLG 539
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAG 400
+ ++ H ++R + L D Y+K G +E +R +F M K++I+WN+LI G
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 599
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
Y HG A+ +F QM + + PN T +++ A G + G ++FYS++ D+ + P
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 659
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
H + M+ L GR L+EA I+ ++ +W + LT CR+HG++ + AAE L
Sbjct: 660 ALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENL 719
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
+ +EP ++ ++ +Y+ KL + K + L SWIEV+ + F G
Sbjct: 720 FSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTG 779
Query: 581 DKSHTQTKEIY------QKVDNLMDEISRHGYIEEHEMLLPDVDEEEQRILKYHSEMLGI 634
D+S T +Y ++DN D+ + +IEE E + HSE +
Sbjct: 780 DQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEE---------EGREETCGIHSEKFAM 830
Query: 635 AYGLINT--PDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSC 692
A+GLI++ T ++I + R+C +CH+ K ++ G +I++ D HHF+NG CSC
Sbjct: 831 AFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSC 890
Query: 693 GDYW 696
DYW
Sbjct: 891 KDYW 894
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 185/429 (43%), Gaps = 53/429 (12%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
NR++E LF ++ +G D + ++ C + K + +I G L
Sbjct: 160 NRWREVAKLFRLMMKDGVLPD--DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
+ N +L ++ +CG + A K F M ERD ++W +++ +G + EA
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEA----------- 266
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
+E+ +++ K G+ LI Y++ G + A
Sbjct: 267 --------------------VELVKEME----KEGISPGLVTWNILIGGYNQLGKCDAA- 301
Query: 280 CVFDQMPEKSTVG-------WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
D M + T G W ++ISG G +AL ++ +M +G + TI +
Sbjct: 302 --MDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
C+ L + + H+ V+ GF D++ LVD YSK G++EDAR VFD + K+V
Sbjct: 360 SACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY 419
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
+WN++I GY G +A E+F +M + PN +T+ ++S +G ++F M
Sbjct: 420 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 479
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE---PTKNMWVALLTACRMHGN 509
+D KV+ + +I + G DEA L R P ++LL AC N
Sbjct: 480 EKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC---AN 536
Query: 510 LVLGKFAAE 518
L+ K E
Sbjct: 537 LLGAKMVRE 545
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 205/458 (44%), Gaps = 49/458 (10%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G+ V STY L+ C+ SI + R+ EPD+++ ++L M+ +CG + DA
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIH-LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
RK+F M ER+ +W +I + E + F M ++ F +++ A
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
G +E G+ IHS +K G+ V+ +++ +Y+KCG ++ A F +M E+ + WNS++
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
Y G EEA+ + EM + G
Sbjct: 255 LAYCQNGKHEEAVELVKEME-----------------------------------KEGIS 279
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEM 413
+V L+ Y++ G+ + A + +M + +V +W A+I+G ++G QA++M
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
F +M V+PN VT ++ +SACS + +G E+ +S++ + ++++
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV-HSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 474 REGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM 533
+ G L++A + S + W +++T G GK A E M+ L ++
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYT-WNSMITGYCQAG--YCGK-AYELFTRMQDANLRPNII 454
Query: 534 LLNM----YSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
N Y +G EA + + +++ G T +W
Sbjct: 455 TWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 183/400 (45%), Gaps = 54/400 (13%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE----RDAVSWMTLISGLVDSGN 204
M G P L N ++ + + G A L M D +W +ISGL+ +G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
+A + F M+ + T + V A + L +I G ++HS A+K G +D V +
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKID 324
L+DMYSKCG +EDA+ VFD + K WNS+I+GY GY +A ++ M+D+ +
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR-- 450
Query: 325 QFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD 384
+I+ ++ Y K G +A +F
Sbjct: 451 ---------------------------------PNIITWNTMISGYIKNGDEGEAMDLFQ 477
Query: 385 RM-----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS 439
RM +++N +WN +IAGY +G+ ++A+E+F +M R +PN VT L++L AC+
Sbjct: 478 RMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANL 537
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM--W 497
++ EI + R + A+ A + + + G ++ + + TK++ W
Sbjct: 538 LGAKMVREIHGCVLRRNLDAIHAVKNA-LTDTYAKSGDIEYSRTIFLGM---ETKDIITW 593
Query: 498 VALLTACRMHGNL--VLGKFAAEKLYGMEP--GKLSSYVM 533
+L+ +HG+ L F K G+ P G LSS ++
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIIL 633
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 172/372 (46%), Gaps = 24/372 (6%)
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L +G+ EA + ++++ + + T+ ++ + G I +GR +H+ D
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-RFGLFTEPD 114
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
FV L+ MY+KCG I DA+ VFD M E++ W+++I Y+ E ++ M
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G D F +++ CA +E K H+ +++ G S + + ++ Y+K G ++
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
A F RM ++VI+WN+++ Y +G+ E+A+E+ ++M +E + P VT+ ++ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS---APVEPTKN 495
G + ++ M + + MI L G+ +A + R A V P
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 496 MWVALLTAC----------RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
++ ++AC +H V F + L G L++MYS GKL
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS---------LVDMYSKCGKLE 404
Query: 546 EAAGVLKTLKRK 557
+A V ++K K
Sbjct: 405 DARKVFDSVKNK 416
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 270/569 (47%), Gaps = 71/569 (12%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
++EA+ LF L D ++ A+++ C L +++ +++ +I +GF L +
Sbjct: 51 HQEAIALFTQLRFSDAKPD--DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVN 108
Query: 162 NRVLHMHVRCGLMLDARKLFADM---------------------------------PERD 188
N ++ M+ +C L A K+F DM P+R
Sbjct: 109 NSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRV 168
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRA-SAGLGLIEVGRQIH 247
A +W +ISG G F M E TF++++ A SA + GR +H
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVH 228
Query: 248 SCALKRGVGEDSFVACALIDMYSKCGSIEDAQ--------------------C------- 280
+ LK G +++ Y+K GS +DA C
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETE 288
Query: 281 ----VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
VF PEK+ V W ++I+GY G E+AL ++EM SG D F V+ C+
Sbjct: 289 KALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACS 348
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
LA L H K H L+ GF LV+ Y+K G +++A F + K+++SWN
Sbjct: 349 GLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNT 408
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
++ +G HG +QA+++++ M+ + P++VTF+ +L+ CS+SGL E G IF SM +D+
Sbjct: 409 MLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDY 468
Query: 457 KVKPRAMHYACMIELLGREGLLDEA--FALIRSAPVEPTKN--MWVALLTACRMHGNLVL 512
++ H CMI++ GR G L EA A S+ V + N W LL AC H + L
Sbjct: 469 RIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTEL 528
Query: 513 GKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKK 572
G+ ++ L EP + S+V+L N+Y S+G+ E V + + +G+ P CSWIEV
Sbjct: 529 GREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGN 588
Query: 573 QPYAFLCGDKSHTQTKEIYQKVDNLMDEI 601
Q F+ GD SH + +E+ + ++ L E+
Sbjct: 589 QVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 205/487 (42%), Gaps = 106/487 (21%)
Query: 170 RCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR--SRTF 227
+ G + AR++F MPE D V+W T+++ G + EA F + F+D + +F
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL--RFSDAKPDDYSF 73
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS------------- 274
++ A LG ++ GR+I S ++ G V +LIDMY KC
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 275 --------------------IEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYL 314
E A VF +MP++ WN +ISG+A G E LS++
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 315 EMRDSGAKIDQFTISIVIRIC-ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
EM +S K D +T S ++ C A +++ + + HA ++++G+ S + A ++ FY+K
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 374 GRMEDAR-------------------------------HVFDRMLRKNVISWNALIAGYG 402
G +DA VF KN+++W +I GYG
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI-------------- 448
+G GEQA+ F +M++ V +H + AVL ACS L G I
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 449 -------FYSMSRDHKVKPRA---------MHYACMIELLGREGLLDEAFAL---IRSAP 489
Y+ D K RA + + M+ G GL D+A L + ++
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 490 VEPTKNMWVALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSYVMLLNMYSSSGKLME 546
++P ++ LLT C G + G E + Y + P ++ +++M+ G L E
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRI-PLEVDHVTCMIDMFGRGGHLAE 492
Query: 547 AAGVLKT 553
A + T
Sbjct: 493 AKDLATT 499
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 33/205 (16%)
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
I +K G I A+ VFD MPE TV WN++++ Y+ G +EA++++ ++R S AK D
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK------------- 372
++ + ++ CA L +++ ++ + ++R GF + + N L+D Y K
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 373 ----------WGRM----------EDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
W + E A VF M ++ +WN +I+G+ + G+ E +
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 413 MFEQMLRERVIPNHVTFLAVLSACS 437
+F++ML P+ TF ++++ACS
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACS 215
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%)
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
S +V T + +K GR+ AR VFD M + ++WN ++ Y G ++AI +F Q+
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 418 LRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
P+ +F A+LS C+ G + G +I
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKI 92
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/530 (30%), Positives = 270/530 (50%), Gaps = 7/530 (1%)
Query: 34 CFASKVRYWRYPFSQIRCSSSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTSGLCSQI 93
C AS+V W + S SS+ L K G ++ V ED ++ + I
Sbjct: 368 CEASQVHAWVFK-SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMI 425
Query: 94 EKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG 153
+ + +A+ LF + EG D V C+ L K+V GY + +G
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG-----KQVHGYTLKSG 480
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
DL + + + ++ +CG + ++ KLF +P +D W ++ISG + G EA F
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG 273
M ++ T A ++ + + G++IH L+ G+ + + AL++MYSKCG
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 274 SIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIR 333
S++ A+ V+D++PE V +S+ISGY+ G ++ ++ +M SG +D F IS +++
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 334 ICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS 393
A Q HA + + G ++ + L+ YSK+G ++D F ++ ++I+
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 453
W ALIA Y HG+ +A++++ M + P+ VTF+ VLSACS+ GL E + SM
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 454 RDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG 513
+D+ ++P HY CM++ LGR G L EA + I + ++P +W LL AC++HG + LG
Sbjct: 781 KDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELG 840
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLP 563
K AA+K +EP +Y+ L N+ + G+ E K +K G+ P
Sbjct: 841 KVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEP 890
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/533 (24%), Positives = 241/533 (45%), Gaps = 51/533 (9%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
K GH+ + V + + PS + N A+++F+ E+ G ++
Sbjct: 297 KCGHMAEAMEVF--SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK--EMRHSGVEINNC 352
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T ++++ C + +V ++ +GF D + ++ M+ + G + + ++F D+
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 185 PE---RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE 241
+ ++ V+ M I+ S +A F M +E R+ F+ S L +
Sbjct: 413 DDIQRQNIVNVM--ITSFSQSKKPGKAIRLFTRMLQE--GLRTDEFSVCSLLSV-LDCLN 467
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+G+Q+H LK G+ D V +L +YSKCGS+E++ +F +P K W S+ISG+
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
GY EA+ ++ EM D G D+ T++ V+ +C+ SL K+ H +R G +
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+ LV+ YSK G ++ AR V+DR+ + +S ++LI+GY HG + +F M+
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR-----------------------DHKV 458
+ ++L A + S S G ++ +++ D
Sbjct: 648 FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCC 707
Query: 459 K-------PRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHG 508
K P + + +I + G +EA + L++ +P K +V +L+AC HG
Sbjct: 708 KAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACS-HG 766
Query: 509 NLVLGKF----AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
LV + + K YG+EP YV +++ SG+L EA + + K
Sbjct: 767 GLVEESYFHLNSMVKDYGIEPEN-RHYVCMVDALGRSGRLREAESFINNMHIK 818
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 247/534 (46%), Gaps = 39/534 (7%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
++E++ F + G A+ +Y ++++ C L++ + V + I G+ +
Sbjct: 131 FEESLRFFSKMHFLGFEAN--EISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
+ ++ + + DA K+F D + W T+I+G + + NY F+ F M F
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
S T+++++ A A L + G+ + + +K G ED FV A++D+Y+KCG + +A V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
F ++P S V W ++SGY + AL I+ EMR SG +I+ T++ VI C R + +
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF---DRMLRKNVISWNALI 398
A Q HA + + GF D L+ YSK G ++ + VF D + R+N++ N +I
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMI 425
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA--CSYSGLSERGWEIFYSMSRDH 456
+ + +AI +F +ML+E + + + ++LS C G G+ + + D
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL--VLGK 514
V + + L + G L+E++ L + P + W ++++ +G L +G
Sbjct: 486 TVG------SSLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGL 538
Query: 515 FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL-----------TMLP 563
F+ G P + S+ +L + SS L + R G+ M
Sbjct: 539 FSEMLDDGTSPDE-STLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 564 TCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDV 617
C +++ +Q Y L + + +L+ S+HG I++ +L D+
Sbjct: 598 KCGSLKLARQVYDRL------PELDPV--SCSSLISGYSQHGLIQDGFLLFRDM 643
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 146/303 (48%), Gaps = 4/303 (1%)
Query: 136 LRSIRGVKRVFGYMISNGFEP-DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMT 194
L ++R K + +++ P D+++ +L + G M DA KLF +P+ D VS
Sbjct: 61 LCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNI 120
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
+ISG + E+ F M + ++ +++ A + L + +K G
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 255 VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEAL-SIY 313
V ALID++SK EDA VF + WN+II+G ALR + A+ ++
Sbjct: 181 YFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAG-ALRNQNYGAVFDLF 239
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
EM K D +T S V+ CA L L K A +++ G D+ T +VD Y+K
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKC 298
Query: 374 GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
G M +A VF R+ +V+SW +++GY A+E+F++M V N+ T +V+
Sbjct: 299 GHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVI 358
Query: 434 SAC 436
SAC
Sbjct: 359 SAC 361
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%)
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
D F+ +L+ YS GS+ DA +FD +P+ V N +ISGY EE+L + +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
G + ++ + VI C+ L + ++ ++ G+ V + L+D +SK R E
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
DA VF L NV WN +IAG + ++F +M P+ T+ +VL+AC+
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 258 bits (660), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 246/493 (49%), Gaps = 35/493 (7%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
+G V + ++ C L ++G ++ G++ G DL++ N ++ ++++CG +
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF---------LCMWEEFNDGRSRT- 226
+R++F MP+RD+VS+ ++I G V G A E F L W G ++T
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTS 234
Query: 227 ---------FA-----------TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI 266
FA +M+ G IE + + +R D +I
Sbjct: 235 DGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR----DVVTWATMI 290
Query: 267 DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQ 325
D Y+K G + A+ +FDQMP + V +NS+++GY Y EAL I+ +M ++S D
Sbjct: 291 DGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDD 350
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T+ IV+ A+L L A H +V F L+D YSK G ++ A VF+
Sbjct: 351 TTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEG 410
Query: 386 MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 445
+ K++ WNA+I G HG GE A +M Q+ R + P+ +TF+ VL+ACS+SGL + G
Sbjct: 411 IENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEG 470
Query: 446 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACR 505
F M R HK++PR HY CM+++L R G ++ A LI PVEP +W LTAC
Sbjct: 471 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACS 530
Query: 506 MHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTC 565
H G+ A+ L SSYV+L NMY+S G + V +K + + +P C
Sbjct: 531 HHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGC 590
Query: 566 SWIEVKKQPYAFL 578
SWIE+ + + F
Sbjct: 591 SWIELDGRVHEFF 603
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 126/257 (49%), Gaps = 17/257 (6%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYS-----------KCGSIEDAQCVFDQMPEKSTVG 292
QIH +K G+ ++S + ++ ++ +C E C F +
Sbjct: 29 NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFL 88
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
WN++I ++ +AL + M ++G +D+F++S+V++ C+RL ++ Q H L
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIE 412
+ G SD+ L+ Y K G + +R +FDRM +++ +S+N++I GY G A E
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F+ M E + N +++ +++S Y+ S+ G +I + D K + + MI+
Sbjct: 209 LFDLMPME--MKNLISWNSMISG--YAQTSD-GVDIASKLFADMPEKD-LISWNSMIDGY 262
Query: 473 GREGLLDEAFALIRSAP 489
+ G +++A L P
Sbjct: 263 VKHGRIEDAKGLFDVMP 279
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 241/468 (51%), Gaps = 6/468 (1%)
Query: 148 YMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL-----VDS 202
Y G E D+ + +L M+ + G + +A KLF+ MP ++ V++ +ISG +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
+EAF+ F+ M + TF+ +++A + +E GRQIH+ K D F+
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIG 396
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
ALI++Y+ GS ED F ++ W S+I + E A ++ ++ S +
Sbjct: 397 SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIR 456
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
+++T+S+++ CA A+L +Q ++ G + T + Y+K G M A V
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
F + +V +++A+I+ HG +A+ +FE M + PN FL VL AC + GL
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 443 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT 502
+G + F M D+++ P H+ C+++LLGR G L +A LI S+ + W ALL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 503 ACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTML 562
+CR++ + V+GK AE+L +EP SYV+L N+Y+ SG A V + ++ +G+
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 563 PTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEH 610
P SWI + Q ++F D SH ++ IY ++ MD + Y H
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLET-MDNVDFVDYTLVH 743
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 8/314 (2%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K G+MI + P LY++N +L+M+ +C + AR+LF MPER+ +S+ +LISG
Sbjct: 67 KLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQM 126
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
G Y +A E FL E T+A + +++G +H + G+ + F+
Sbjct: 127 GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLI 186
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
LIDMYSKCG ++ A +FD+ E+ V WNS+ISGY G +EE L++ +M G
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Query: 323 IDQFTISIVIRICA---RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
+ + + V++ C +E H + G DIV T L+D Y+K G +++A
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEA 306
Query: 380 RHVFDRMLRKNVISWNALIAGYGNHGQ-----GEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+F M KNV+++NA+I+G+ + +A ++F M R + P+ TF VL
Sbjct: 307 IKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLK 366
Query: 435 ACSYSGLSERGWEI 448
ACS + E G +I
Sbjct: 367 ACSAAKTLEYGRQI 380
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 144/281 (51%), Gaps = 17/281 (6%)
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
S + + + +A G + +G+ H +K + ++ L++MY KC + A+ +FD
Sbjct: 47 SEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD 106
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
+MPE++ + +NS+ISGY G+ E+A+ ++LE R++ K+D+FT + + C L+
Sbjct: 107 RMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDL 166
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
+ H +V +G + L+D YSK G+++ A +FDR ++ +SWN+LI+GY
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS---GLSERGWEIF-----YSMSRD 455
G E+ + + +M R+ + +VL AC + G E+G I M D
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
V+ ++++ + G L EA L + P+KN+
Sbjct: 287 IVVR------TALLDMYAKNGSLKEAIKLF---SLMPSKNV 318
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 26/309 (8%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA LF ++++ G + ST+ ++ C +++ +++ + N F+ D ++ +
Sbjct: 341 EAFKLF--MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ ++ G D + FA ++D SW ++I V + AF+ F ++
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
T + M+ A A + G QI A+K G+ + V + I MY+K G++ A VF
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
++ ++++IS A G + EAL+I+ M+ G K +Q V+ C
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC-------- 570
Query: 344 AKQAHAALVRHGF------GSDIVAN------TGLVDFYSKWGRMEDARH-VFDRMLRKN 390
H LV G +D N T LVD + GR+ DA + + + +
Sbjct: 571 ---CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 391 VISWNALIA 399
++W AL++
Sbjct: 628 PVTWRALLS 636
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
+D I+ + A+ S+ K AH +++ + L++ Y K + AR +
Sbjct: 45 LDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQL 104
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
FDRM +N+IS+N+LI+GY G EQA+E+F + + + T+ L C
Sbjct: 105 FDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 443 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
+ G E+ + + + + + +I++ + G LD+A +L
Sbjct: 165 DLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 212/363 (58%), Gaps = 2/363 (0%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
G H ALK G D ++ +L+ +Y G +E+A VF++MPE++ V W ++ISG
Sbjct: 136 FRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISG 195
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
+A + L +Y +MR S + + +T + ++ C +L + H + G S
Sbjct: 196 FAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSY 255
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML- 418
+ + L+ Y K G ++DA +FD+ K+V+SWN++IAGY HG QAIE+FE M+
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMP 315
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
+ P+ +T+L VLS+C ++GL + G + F+++ +H +KP HY+C+++LLGR GLL
Sbjct: 316 KSGTKPDAITYLGVLSSCRHAGLVKEGRK-FFNLMAEHGLKPELNHYSCLVDLLGRFGLL 374
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
EA LI + P++P +W +LL +CR+HG++ G AAE+ +EP +++V L N+Y
Sbjct: 375 QEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLY 434
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLM 598
+S G EAA V K +K KGL P CSWIE+ + F D S+ + EI + L+
Sbjct: 435 ASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLI 494
Query: 599 DEI 601
D +
Sbjct: 495 DHM 497
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 4/326 (1%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
DG + V C R R + GF D+Y+ + ++ ++ G + +
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
A K+F +MPER+ VSW +ISG + + M + +D TF ++ A G
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
G + GR +H L G+ ++ +LI MY KCG ++DA +FDQ K V WNS+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 297 ISGYALRGYSEEALSIY-LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
I+GYA G + +A+ ++ L M SG K D T V+ C ++ ++ + HG
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMF 414
++ + LVD ++G +++A + + M ++ N + W +L+ HG I
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 415 EQ--MLRERVIPNHVTFLAVLSACSY 438
E+ ML HV + ++ Y
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGY 439
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
++ G D + +S +R C H ++ GF SD+ + LV Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+E+A VF+ M +NV+SW A+I+G+ + + ++++ +M + PN TF A+LSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 436 CSYSGLSERGWEI---------------------FYSMSRDHKVKPR---------AMHY 465
C+ SG +G + Y D K R + +
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 466 ACMIELLGREGLLDEAFALIR----SAPVEPTKNMWVALLTACRMHGNLVLGK--FAAEK 519
MI + GL +A L + +P ++ +L++CR G + G+ F
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 520 LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+G++P +L+ Y L+++ G L EA +++ + K
Sbjct: 351 EHGLKP-ELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 237/436 (54%), Gaps = 4/436 (0%)
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLIS 197
++R K V GY GF DL + +L ++ + ++ AR++F +++ V+W +I
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFAT--MVRASAGLGLIEVGRQIHSCALKRGV 255
G V++ EA E F M N A ++ A G + GR +H A+K G
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
D V +I Y+K GS+ DA F ++ K + +NS+I+G + EE+ ++ E
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
MR SG + D T+ V+ C+ LA+L H H V HG+ + L+D Y+K G+
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
++ A+ VFD M +++++SWN ++ G+G HG G++A+ +F M V P+ VT LA+LSA
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Query: 436 CSYSGLSERGWEIFYSMSR-DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK 494
CS+SGL + G ++F SMSR D V PR HY CM +LL R G LDEA+ + P EP
Sbjct: 520 CSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
Query: 495 NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+ LL+AC + N LG ++K+ + S V+L N YS++ + +AA +
Sbjct: 580 RVLGTLLSACWTYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQ 638
Query: 555 KRKGLTMLPTCSWIEV 570
K++GL P SW++V
Sbjct: 639 KKRGLLKTPGYSWVDV 654
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 226/476 (47%), Gaps = 30/476 (6%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
++A+DL+ ++ G TY ++ C GLR+I K + ++ + F D+Y+
Sbjct: 85 EKALDLY--YKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCT 142
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ + +CG + A K+F +MP+RD V+W +ISG + FL M DG
Sbjct: 143 ALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRI--DG 200
Query: 223 RSRTFATMVRASAGL---GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
S +T+V L G + G+ +H + G D V ++D+Y+K I A+
Sbjct: 201 LSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYAR 260
Query: 280 CVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM--RDSGAKIDQFTISIVIRICAR 337
VFD +K+ V W+++I GY +EA ++ +M D+ A + I +++ CAR
Sbjct: 261 RVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCAR 320
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNAL 397
L + H V+ GF D+ ++ FY+K+G + DA F + K+VIS+N+L
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSL 380
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY-----SGLSERGWEIFYSM 452
I G + + E++ +F +M + P+ T L VL+ACS+ G S G+ + +
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVL 512
+ + + M ++ + G LD A + + + W +L +HG L
Sbjct: 441 AVNTSICNALM------DMYTKCGKLDVAKRVFDTMHKRDIVS-WNTMLFGFGIHG---L 490
Query: 513 GK-----FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLP 563
GK F + + G+ P ++ + + +L+ S SG + E + ++ R ++P
Sbjct: 491 GKEALSLFNSMQETGVNPDEV-TLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIP 545
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 134/255 (52%), Gaps = 3/255 (1%)
Query: 167 MHVRCGLMLDARKLFADMPER--DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS 224
++ C + AR +F ++P + ++W +I + +A + + M
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 225 RTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ 284
T+ +++A AGL I+ G+ IHS D +V AL+D Y+KCG +E A VFD+
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDE 163
Query: 285 MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD-SGAKIDQFTISIVIRICARLASLEH 343
MP++ V WN++ISG++L + + ++L+MR G + TI + R +L
Sbjct: 164 MPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
K H R GF +D+V TG++D Y+K + AR VFD +KN ++W+A+I GY
Sbjct: 224 GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVE 283
Query: 404 HGQGEQAIEMFEQML 418
+ ++A E+F QML
Sbjct: 284 NEMIKEAGEVFFQML 298
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 242 VGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDAQCVFDQMPEK--STVGWNSIIS 298
+G+ IH LKR + S V L +Y+ C +E A+ VFD++P + + W+ +I
Sbjct: 17 LGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIR 76
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
YA ++E+AL +Y +M +SG + ++T V++ CA L +++ K H+ + F +
Sbjct: 77 AYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFAT 136
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
D+ T LVDFY+K G +E A VFD M ++++++WNA+I+G+ H I +F M
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 419 R-ERVIPNHVTFLAVLSACSYSGLSERG 445
R + + PN T + + A +G G
Sbjct: 197 RIDGLSPNLSTIVGMFPALGRAGALREG 224
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 270/527 (51%), Gaps = 44/527 (8%)
Query: 121 VGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD---A 177
+ G+TY L++ ++R +K++ +I G D +RVL C D A
Sbjct: 22 LSGNTYLRLIDT--QCSTMRELKQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYA 77
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF---LCMWEEFNDGRSRTFATMVRAS 234
+F + ++ W T+I G S A F LC R T+ ++ +A
Sbjct: 78 YLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR-LTYPSVFKAY 136
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY------------------------- 269
LG GRQ+H +K G+ +DSF+ ++ MY
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 270 ------SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
+KCG I+ AQ +FD+MP+++ V WNS+ISG+ G ++AL ++ EM++ K
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP 256
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
D FT+ ++ CA L + E + H +VR+ F + + T L+D Y K G +E+ +VF
Sbjct: 257 DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF 316
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
+ +K + WN++I G N+G E+A+++F ++ R + P+ V+F+ VL+AC++SG
Sbjct: 317 ECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVH 376
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
R E F M + ++P HY M+ +LG GLL+EA ALI++ PVE +W +LL+A
Sbjct: 377 RADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Query: 504 CRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLP 563
CR GN+ + K AA+ L ++P + YV+L N Y+S G EA +K + +
Sbjct: 437 CRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEV 496
Query: 564 TCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEIS--RHGYIE 608
CS IEV + + F+ +H ++ EIY +D L ++S + G+ E
Sbjct: 497 GCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDILNWDVSTIKSGFAE 543
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I R+K+A+D+F E++ G T +L+N C L + + + Y++
Sbjct: 228 SMISGFVRNGRFKDALDMFR--EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFE 210
N FE + ++ ++ M+ +CG + + +F P++ W ++I GL ++G A +
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMD 345
Query: 211 QFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACAL-IDMY 269
F + + S +F ++ A A G + + ++ + E S L +++
Sbjct: 346 LFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Query: 270 SKCGSIEDAQCVFDQMP-EKSTVGWNSIISG 299
G +E+A+ + MP E+ TV W+S++S
Sbjct: 406 GGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 240/460 (52%), Gaps = 40/460 (8%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF + + ++ + G + +ARK+F +MPERD ++W T++S A+ +
Sbjct: 899 GFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVS----------AYRRV 948
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
L M +S A + ++ C LI+ Y
Sbjct: 949 LDM----------------------------DSANSLANQMSEKNEATSNC-LINGYMGL 979
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
G++E A+ +F+QMP K + W ++I GY+ EA++++ +M + G D+ T+S VI
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
CA L LE K+ H +++GF D+ + LVD YSK G +E A VF + +KN+
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
WN++I G HG ++A++MF +M E V PN VTF++V +AC+++GL + G I+ SM
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVL 512
D+ + HY M+ L + GL+ EA LI + EP +W ALL CR+H NLV+
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 1219
Query: 513 GKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTML-PTCSWIEVK 571
+ A KL +EP Y +L++MY+ + + A + ++ G+ + P S I +
Sbjct: 1220 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1279
Query: 572 KQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHE 611
K+ + F DKSH+ + E+ +D + D++ GY++E E
Sbjct: 1280 KRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETE 1319
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 153/374 (40%), Gaps = 81/374 (21%)
Query: 251 LKRGVGEDSFVACALIDMY-SKCGS---IEDAQCVFDQMPEKSTVGWNSIISGYALRGYS 306
+K + +D C L++ + + C S ++ A QM E + +N++ G+ +
Sbjct: 797 IKTSLNQD----CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHP 852
Query: 307 EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGL 366
+L +Y+ M +T S +++ + + + QAH GFG + T L
Sbjct: 853 IRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKF--GFGFHVKIQTTL 910
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISW-------------------------------N 395
+DFYS GR+ +AR VFD M ++ I+W N
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSN 970
Query: 396 ALIAGYGNHGQGEQAIEMFEQ-------------------------------MLRERVIP 424
LI GY G EQA +F Q M+ E +IP
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+ VT V+SAC++ G+ E G E+ ++ V + A ++++ + G L+ A +
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSA-LVDMYSKCGSLERALLV 1089
Query: 485 IRSAPVEPTKNM--WVALLTACRMHG--NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
+ P KN+ W +++ HG L FA ++ ++P + ++V + +
Sbjct: 1090 FFNL---PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV-TFVSVFTACTH 1145
Query: 541 SGKLMEAAGVLKTL 554
+G + E + +++
Sbjct: 1146 AGLVDEGRRIYRSM 1159
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 14/206 (6%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
RY+EA+ +F + EG D T +++ C L + K V Y + NGF D+Y+
Sbjct: 1012 RYREAIAVFYKMMEEGIIPD--EVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 1069
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
+ ++ M+ +CG + A +F ++P+++ W ++I GL G EA + F M E
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESV 1129
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC------ALIDMYSKCGS 274
+ TF ++ A GL++ GR+I+ R + +D + ++ ++SK G
Sbjct: 1130 KPNAVTFVSVFTACTHAGLVDEGRRIY-----RSMIDDYSIVSNVEHYGGMVHLFSKAGL 1184
Query: 275 IEDAQCVFDQMP-EKSTVGWNSIISG 299
I +A + M E + V W +++ G
Sbjct: 1185 IYEALELIGNMEFEPNAVIWGALLDG 1210
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 244/489 (49%), Gaps = 40/489 (8%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
+++ LF + EGD V +T + C R ++ G + E DL++
Sbjct: 255 FEDGFGLFLRMRQEGD-VKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLG 313
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ M+ + G M +A+ +F M +D+VSW +LI+GLV +EA+E F E+
Sbjct: 314 NSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF----EKMPG 369
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
++ M++ +G G I SKC +
Sbjct: 370 KDMVSWTDMIKGFSGKGEI-----------------------------SKCVEL------ 394
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
F MPEK + W ++IS + GY EEAL + +M + +T S V+ A LA L
Sbjct: 395 FGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
Q H +V+ +D+ LV Y K G DA +F + N++S+N +I+GY
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
+G G++A+++F + PN VTFLA+LSAC + G + GW+ F SM + ++P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY 521
HYACM++LLGR GLLD+A LI + P +P +W +LL+A + H + L + AA+KL
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLI 634
Query: 522 GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGD 581
+EP + YV+L +YS GK + ++ K K + P SWI +K + + FL GD
Sbjct: 635 ELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGD 694
Query: 582 KSHTQTKEI 590
+S +EI
Sbjct: 695 ESQLNLEEI 703
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 192/431 (44%), Gaps = 77/431 (17%)
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DG 222
++H + + G ++DAR LF M ER+ ++W +I G +G + + F FL M +E +
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
S T A M +A G QIH + + D F+ +L+ MYSK G + +A+ VF
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
M K +V WNS+I+G R EA ++ +M
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP------------------------- 368
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
G D+V+ T ++ +S G + +F M K+ I+W A+I+ +
Sbjct: 369 --------------GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS-----YSGLSERGWEIFYSMSRDHK 457
++G E+A+ F +ML++ V PN TF +VLSA + GL G + ++ D
Sbjct: 415 SNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS 474
Query: 458 VK-------------------------PRAMHYACMIELLGREGLLDEA---FALIRSAP 489
V+ P + Y MI G +A F+++ S+
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Query: 490 VEPTKNMWVALLTACRMHGNLVLG-KF--AAEKLYGMEPGKLSSYVMLLNMYSSSGKLME 546
EP ++ALL+AC G + LG K+ + + Y +EPG Y ++++ SG L +
Sbjct: 535 KEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGP-DHYACMVDLLGRSGLLDD 593
Query: 547 AAGVLKTLKRK 557
A+ ++ T+ K
Sbjct: 594 ASNLISTMPCK 604
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 182/394 (46%), Gaps = 22/394 (5%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
A +LF D+PE++AVS+ T+I+G V +G + EA + +F D + A+ V S
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRD----SVASNVLLS-- 185
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACA-LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNS 295
G + G+ + + +G+ V+C+ ++ Y K G I DA+ +FD+M E++ + W +
Sbjct: 186 -GYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTA 244
Query: 296 IISGYALRGYSEEALSIYLEMRDSG-AKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+I GY G+ E+ ++L MR G K++ T++++ + C Q H + R
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
D+ L+ YSK G M +A+ VF M K+ +SWN+LI G Q +A E+F
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
E+M + + V++ ++ S G + E+F M + + MI
Sbjct: 365 EKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVS 415
Query: 475 EGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME-PGKLSS 530
G +EA F + V P + ++L+A +L+ G ++ M LS
Sbjct: 416 NGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSV 475
Query: 531 YVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT 564
L++MY G +A + + + T
Sbjct: 476 QNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/470 (31%), Positives = 251/470 (53%), Gaps = 21/470 (4%)
Query: 155 EPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLC 214
E ++ N ++ V+ G + +A LF MP RD VSW ++ GL +G EA F C
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 215 MWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI---DMYSK 271
M E ++ M+ A I+ Q+ +R + + I +M
Sbjct: 228 MPER----NIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISI 330
CG +FD+MPEK+ + W ++I+GY +EEAL+++ +M RD K + T
Sbjct: 284 CG-------LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML--R 388
++ C+ LA L +Q H + + + + + L++ YSK G + AR +FD L +
Sbjct: 337 ILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQ 396
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
+++ISWN++IA Y +HG G++AIEM+ QM + P+ VT+L +L ACS++GL E+G E
Sbjct: 397 RDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEF 456
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
F + RD + R HY C+++L GR G L + I +++ + A+L+AC +H
Sbjct: 457 FKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHN 516
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
+ + K +K+ +YV++ N+Y+++GK EAA + +K KGL P CSW+
Sbjct: 517 EVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWV 576
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYI----EEHEMLL 614
+V KQ + F+ GDKSH Q + + + +L +++ ++ + EE E L+
Sbjct: 577 KVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEAEFLV 626
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 196/424 (46%), Gaps = 56/424 (13%)
Query: 170 RCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR--TF 227
+ G + +ARKLF +PERD V+W +I+G + G+ EA E F + D R T+
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF-----DRVDSRKNVVTW 112
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE 287
MV + + + +R V +ID Y++ G I+ A +FD+MPE
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEM--RD------------SGAKIDQ-------- 325
++ V WNS++ RG +EA++++ M RD K+D+
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 326 -----FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
+ + +I A+ ++ A Q + F S TG + + M A
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFI----RNREMNKAC 284
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSACS-Y 438
+FDRM KNVISW +I GY + + E+A+ +F +MLR+ V PN T++++LSACS
Sbjct: 285 GLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDL 344
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV-EPTKNMW 497
+GL E G +I +S+ K + A ++ + + G L A + + V + W
Sbjct: 345 AGLVE-GQQIHQLISKSVHQKNEIVTSA-LLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 498 VALLTACRMHGNLVLGKFAAE-----KLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLK 552
+++ HG+ GK A E + +G +P + +Y+ LL S +G + + K
Sbjct: 403 NSMIAVYAHHGH---GKEAIEMYNQMRKHGFKPSAV-TYLNLLFACSHAGLVEKGMEFFK 458
Query: 553 TLKR 556
L R
Sbjct: 459 DLVR 462
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 160/370 (43%), Gaps = 75/370 (20%)
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
L + R I+S + + V + + LI K G I +A+ +FD +PE+ V W +I+
Sbjct: 30 LFNLVRSIYSSSSRPRVPQPEW----LIGELCKVGKIAEARKLFDGLPERDVVTWTHVIT 85
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAA--LVRHGF 356
GY G EA ++ + DS + +T A ++ +KQ A L +
Sbjct: 86 GYIKLGDMREARELF-DRVDSRKNVVTWT--------AMVSGYLRSKQLSIAEMLFQEMP 136
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
++V+ ++D Y++ GR++ A +FD M +N++SWN+++ G+ ++A+ +FE+
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 417 MLRERVIP---------------------------NHVTFLAVLSACSYSGLSERGWEIF 449
M R V+ N +++ A+++ + + + ++F
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 450 YSM-SRDHK---------VKPRAMHYAC--------------------MIELLGREGLLD 479
M RD ++ R M+ AC +E E L+
Sbjct: 257 QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM--LLNM 537
++R V+P +V++L+AC LV G+ +L + + V LLNM
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ-QIHQLISKSVHQKNEIVTSALLNM 375
Query: 538 YSSSGKLMEA 547
YS SG+L+ A
Sbjct: 376 YSKSGELIAA 385
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 235/439 (53%), Gaps = 7/439 (1%)
Query: 167 MHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRT 226
M+ RCG + AR++F + D SW +I+GL ++G EA F M + +
Sbjct: 314 MYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAIS 373
Query: 227 FATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP 286
+++ A + G QIHS +K G D V +L+ MY+ C D C F+
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS---DLYCCFNLFE 430
Query: 287 E----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ +V WN+I++ E L ++ M S + D T+ ++R C ++SL+
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
Q H ++ G + GL+D Y+K G + AR +FD M ++V+SW+ LI GY
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550
Query: 403 NHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRA 462
G GE+A+ +F++M + PNHVTF+ VL+ACS+ GL E G +++ +M +H + P
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 463 MHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYG 522
H +C+++LL R G L+EA I +EP +W LL+AC+ GN+ L + AAE +
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 523 MEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK 582
++P +++V+L +M++SSG AA + ++K+ + +P SWIE++ + + F D
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDI 730
Query: 583 SHTQTKEIYQKVDNLMDEI 601
H + +IY + N+ ++
Sbjct: 731 FHPERDDIYTVLHNIWSQM 749
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 182/345 (52%), Gaps = 2/345 (0%)
Query: 92 QIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMIS 151
I L N Y+EA++ F+ + + + TY +L+ C RS+ +++ ++++
Sbjct: 37 HINSLCKSNFYREALEAFDFAQ-KNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
+ + D + N +L M+ +CG + DAR++F MPER+ VS+ ++I+G +G AEA
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
+L M +E F ++++A A + +G+Q+H+ +K ALI MY +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA-KIDQFTISI 330
+ DA VF +P K + W+SII+G++ G+ EALS EM G +++
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
++ C+ L ++ Q H ++ + +A L D Y++ G + AR VFD++ R +
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
SWN +IAG N+G ++A+ +F QM IP+ ++ ++L A
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 218/482 (45%), Gaps = 67/482 (13%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
+ +++ C + K++ +I L N ++ M+VR M DA ++F +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQF--LCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+D +SW ++I+G G EA + + F+ F + ++A + L + G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNE-YIFGSSLKACSSLLRPDYG 289
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
QIH +K + ++ C+L DMY++CG + A+ VFDQ+ T WN II+G A
Sbjct: 290 SQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANN 349
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
GY++EA+S++ +MR SG D ++ ++ + +L Q H+ +++ GF +D+
Sbjct: 350 GYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVC 409
Query: 364 TGLV-------DFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
L+ D Y + ED R+ D +SWN ++ H Q + + +F+
Sbjct: 410 NSLLTMYTFCSDLYCCFNLFEDFRNNADS------VSWNTILTACLQHEQPVEMLRLFKL 463
Query: 417 MLRERVIPNHVTFLAVLSAC-------------SYS---GLSERGW-------------- 446
ML P+H+T +L C YS GL+ +
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 447 -----EIFYSM-SRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKNMW 497
IF SM +RD + ++ +I + G +EA L ++SA +EP +
Sbjct: 524 LGQARRIFDSMDNRD------VVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTF 577
Query: 498 VALLTACRMHGNLV---LGKFAA-EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKT 553
V +LTAC H LV L +A + +G+ P K ++++ + +G+L EA +
Sbjct: 578 VGVLTACS-HVGLVEEGLKLYATMQTEHGISPTK-EHCSCVVDLLARAGRLNEAERFIDE 635
Query: 554 LK 555
+K
Sbjct: 636 MK 637
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 7/290 (2%)
Query: 196 ISGLVDSGNYAEAFEQFLCMWEEFNDG---RSRTFATMVRASAGLGLIEVGRQIHSCALK 252
I+ L S Y EA E F + + N R RT+ +++ A + + GR+IH L
Sbjct: 38 INSLCKSNFYREALEAF--DFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILN 95
Query: 253 RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
D+ + ++ MY KCGS+ DA+ VFD MPE++ V + S+I+GY+ G EA+ +
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
YL+M DQF +I+ CA + + KQ HA +++ S ++A L+ Y +
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR 215
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLA 431
+ +M DA VF + K++ISW+++IAG+ G +A+ ++ML V PN F +
Sbjct: 216 FNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGS 275
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
L ACS + G +I + + ++ A+ + ++ R G L+ A
Sbjct: 276 SLKACSSLLRPDYGSQI-HGLCIKSELAGNAIAGCSLCDMYARCGFLNSA 324
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 26/288 (9%)
Query: 104 EAMDLFEIL---ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
E + LF+++ E E D +G L+ CV + S++ +V Y + G P+ ++
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGN-----LLRGCVEISSLKLGSQVHCYSLKTGLAPEQFI 510
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
N ++ M+ +CG + AR++F M RD VSW TLI G SG EA F M
Sbjct: 511 KNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGI 570
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSC-ALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
+ TF ++ A + +GL+E G ++++ + G+ ++D+ ++ G + +A+
Sbjct: 571 EPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAE 630
Query: 280 CVFDQMP-EKSTVGWNSIISGYALRGYSEEALSIYLEMR--DSGAKIDQFTISIVIRICA 336
D+M E V W +++S +G +++L + ++ KID F + + +C+
Sbjct: 631 RFIDEMKLEPDVVVWKTLLSACKTQG------NVHLAQKAAENILKIDPFNSTAHVLLCS 684
Query: 337 RLASLEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVF 383
AS +AAL+R D+ G W +ED H+F
Sbjct: 685 MHAS--SGNWENAALLRSSMKKHDVKKIPG-----QSWIEIEDKIHIF 725
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/476 (31%), Positives = 254/476 (53%), Gaps = 4/476 (0%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVL-HMHVRCGLMLDARKLFAD 183
T ++++ C + IR K V G+ + +P+ ++ L ++ CG + D +
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRV 364
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ +R+ V+W +LIS G +A F M + + T A+ + A GL+ +G
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLG 424
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+QIH ++ V D FV +LIDMYSK GS++ A VF+Q+ +S V WNS++ G++
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G S EA+S++ M S ++++ T VI+ C+ + SLE K H L+ G D+ +
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTD 542
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
T L+D Y+K G + A VF M ++++SW+++I YG HG+ AI F QM+
Sbjct: 543 TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTK 602
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
PN V F+ VLSAC +SG E G + ++++ + V P + H+AC I+LL R G L EA+
Sbjct: 603 PNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYR 661
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
I+ P ++W +L+ CR+H + + K L + Y +L N+Y+ G+
Sbjct: 662 TIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGE 721
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMD 599
E + +K L +P S IE+ ++ + F G+++ QT EIY+ + NL +
Sbjct: 722 WEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQN 777
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 238/474 (50%), Gaps = 39/474 (8%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
DG + T ++V C L +R + V G + F+ D + N +L M+ +CG +L
Sbjct: 196 DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLS 255
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAE-AFEQFLCMWEEFNDGRSRTFATMVRASA 235
+ ++F + +++AVSW +IS + G ++E A F M + + T +++ +
Sbjct: 256 SERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCG 314
Query: 236 GLGLIEVGRQIHSCALKRGVGED-SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
+GLI G+ +H A++R + + ++ AL+++Y++CG + D + V + +++ V WN
Sbjct: 315 LIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWN 374
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
S+IS YA RG +AL ++ +M K D FT++ I C + KQ H ++R
Sbjct: 375 SLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT 434
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
+ V N+ L+D YSK G ++ A VF+++ ++V++WN+++ G+ +G +AI +F
Sbjct: 435 DVSDEFVQNS-LIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF 493
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERG-W-----------EIF--------YSMSR 454
+ M + N VTFLAV+ ACS G E+G W ++F Y+
Sbjct: 494 DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCG 553
Query: 455 DHKVKP---RAM------HYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLT 502
D RAM ++ MI G G + A F + + +P + +++ +L+
Sbjct: 554 DLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLS 613
Query: 503 ACRMHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
AC G++ GK F K +G+ P + +++ S SG L EA +K +
Sbjct: 614 ACGHSGSVEEGKYYFNLMKSFGVSPNS-EHFACFIDLLSRSGDLKEAYRTIKEM 666
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 222/511 (43%), Gaps = 53/511 (10%)
Query: 138 SIRGVKRVFGYMISNG-FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
S+R V ++ +++ G D + +++ + G +R +F P D+ + LI
Sbjct: 13 SLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLI 72
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG-LGLIEVGRQIHSCALKRGV 255
V A + + + E F +++RA AG + VG ++H +K GV
Sbjct: 73 KCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGV 132
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
+D+ + +L+ MY + G++ DA+ VFD MP + V W++++S G +AL ++
Sbjct: 133 DDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKC 192
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M D G + D T+ V+ CA L L A+ H + R F D L+ YSK G
Sbjct: 193 MVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGD 252
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ + +F+++ +KN +SW A+I+ Y E+A+ F +M++ + PN VT +VLS+
Sbjct: 253 LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSS 312
Query: 436 CSYSGLSERGWEIF-YSMSRDHKVKPRAMHYA---------------------------- 466
C GL G + +++ R+ ++ A
Sbjct: 313 CGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVA 372
Query: 467 --CMIELLGREGLLDEAFALIR---SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLY 521
+I L G++ +A L R + ++P + ++AC G + LGK +
Sbjct: 373 WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVI 432
Query: 522 GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGD 581
+ L++MYS SG + A+ V +K + + +W + LCG
Sbjct: 433 RTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV-----TW-------NSMLCGF 480
Query: 582 KSHTQTKEIYQKVDNLMDEISRHGYIEEHEM 612
+ + E D + H Y+E +E+
Sbjct: 481 SQNGNSVEAISLFDYMY-----HSYLEMNEV 506
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 140/447 (31%), Positives = 240/447 (53%), Gaps = 8/447 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
++ L+ +C +++ ++ M+ G E + ++H + +CGL+++AR++F +
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV 203
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR--TFATMVRASAGLGLIEV 242
+RD V W L+S V +G EAF M + N R TF++++ A IE
Sbjct: 204 LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQ 259
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
G+QIH+ K D VA AL++MY+K + DA+ F+ M ++ V WN++I G+A
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
G EA+ ++ +M + D+ T + V+ CA+ +++ KQ A + + G +
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
L+ YS+ G + +A F + +++SW ++I +HG E++++MFE ML +++
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKL 438
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
P+ +TFL VLSACS+ GL + G F M+ +K++ HY C+I+LLGR G +DEA
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
++ S P EP+ + A C +H K+ A+KL +EP K +Y +L N Y S G
Sbjct: 499 DVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEG 558
Query: 543 KLMEAAGVLKTLKRKGLT-MLPTCSWI 568
+AA + K +R P CSW+
Sbjct: 559 HWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 226/466 (48%), Gaps = 49/466 (10%)
Query: 132 VCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVS 191
+ L + VK+ G+M+ G L++ N++L + + DA KLF +MP R+ V+
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVT 104
Query: 192 WMTLISGLVD-SGNYAEAFEQFLCMWEE--FNDGR--SRTFATMVRASAGLGLIEVGRQI 246
W LI G++ G+ C F D +F ++R ++ G Q+
Sbjct: 105 WNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQL 164
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYS 306
H +K+G+ F + +L+ Y KCG I +A+ VF+ + ++ V WN+++S Y L G
Sbjct: 165 HCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMI 224
Query: 307 EEALSIYLEMRDSGAKI--DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+EA + M + D FT S ++ C +E KQ HA L + + DI T
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVAT 280
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L++ Y+K + DAR F+ M+ +NV+SWNA+I G+ +G+G +A+ +F QML E + P
Sbjct: 281 ALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQP 340
Query: 425 NHVTFLAVLSACS-YSGL----------SERGWEIFYSMSRD------------------ 455
+ +TF +VLS+C+ +S + +++G F S++
Sbjct: 341 DELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCF 400
Query: 456 HKVK-PRAMHYACMIELLGREGLLDEAFALIRS--APVEPTKNMWVALLTACRMHGNLVL 512
H ++ P + + +I L G +E+ + S ++P K ++ +L+AC HG LV
Sbjct: 401 HSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACS-HGGLVQ 459
Query: 513 GKFAAEK----LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
K Y +E + Y L+++ +G + EA+ VL ++
Sbjct: 460 EGLRCFKRMTEFYKIE-AEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 7/212 (3%)
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
+ SA L + +Q H +K+G+ F+ L+ Y+K +DA +FD+MP ++ V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 292 GWNSIISGYALR-GYSEEALSI---YLE-MRDSGAKIDQFTISIVIRICARLASLEHAKQ 346
WN +I G R G + + YL + + +D + +IR+C +++ Q
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 347 AHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQ 406
H +V+ G S +T LV FY K G + +AR VF+ +L ++++ WNAL++ Y +G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 407 GEQAIEMFEQM--LRERVIPNHVTFLAVLSAC 436
++A + + M + R ++ TF ++LSAC
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC 255
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
++ A L L KQ H +V+ G + + L+ Y+K +DA +FD M +N++
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 393 SWNALIAGY------GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
+WN LI G NH + ++L V +HV+F+ ++ C+ S + G
Sbjct: 104 TWNILIHGVIQRDGDTNH-RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRM 506
++ M + ++ ++ G+ GL+ EA + A ++ +W AL+++ +
Sbjct: 163 QLHCLMVK-QGLESSCFPSTSLVHFYGKCGLIVEARRVFE-AVLDRDLVLWNALVSSYVL 220
Query: 507 HGNLVLGKFAAEKLYGMEPGKL 528
+G ++ F KL G + +
Sbjct: 221 NG-MIDEAFGLLKLMGSDKNRF 241
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 248/477 (51%), Gaps = 24/477 (5%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
L+ VC L S+ VF Y +SN P++Y+ ++ V G D L+ M
Sbjct: 67 LIRVCSTLDSVDYAYDVFSY-VSN---PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNS 122
Query: 189 AVSWMTLISGLVDSGNYA---EAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV-GR 244
+ +I+ ++ + + E Q L + G SR S GL ++E+ G+
Sbjct: 123 VLPDNYVITSVLKACDLKVCREIHAQVL----KLGFGSSR--------SVGLKMMEIYGK 170
Query: 245 QIHSCALKRGVGE----DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
K+ E D A +I+ YS+CG I++A +F + K TV W ++I G
Sbjct: 171 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 230
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
+AL ++ EM+ ++FT V+ C+ L +LE + H+ +
Sbjct: 231 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN 290
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
L++ YS+ G + +AR VF M K+VIS+N +I+G HG +AI F M+
Sbjct: 291 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 350
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
PN VT +A+L+ACS+ GL + G E+F SM R V+P+ HY C+++LLGR G L+E
Sbjct: 351 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 410
Query: 481 AFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
A+ I + P+EP M LL+AC++HGN+ LG+ A++L+ E +YV+L N+Y+S
Sbjct: 411 AYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS 470
Query: 541 SGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
SGK E+ + ++++ G+ P CS IEV Q + FL GD +H + IYQ++ L
Sbjct: 471 SGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 166/371 (44%), Gaps = 51/371 (13%)
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
R +T +++R+ + + IH+ ++ +D+FV LI + S S++ A VF
Sbjct: 28 RRKTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVF 84
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ + + ++I G+ G S + +S+Y M + D + I+ V++ C L+
Sbjct: 85 SYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLK 140
Query: 343 HAKQAHAALVRHGFGS-------------------------------DIVANTGLVDFYS 371
++ HA +++ GFGS D VA T +++ YS
Sbjct: 141 VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYS 200
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ G +++A +F + K+ + W A+I G + + +A+E+F +M E V N T +
Sbjct: 201 ECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 432 VLSACSYSGLSERG-WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRS 487
VLSACS G E G W +S + +++ +I + R G ++EA F ++R
Sbjct: 261 VLSACSDLGALELGRW--VHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 488 APVEPTKNMWVALLTACRMHGNLV--LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
V M ++ MHG V + +F G P ++ + V LLN S G L
Sbjct: 319 KDVISYNTM----ISGLAMHGASVEAINEFRDMVNRGFRPNQV-TLVALLNACSHGGLLD 373
Query: 546 EAAGVLKTLKR 556
V ++KR
Sbjct: 374 IGLEVFNSMKR 384
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 119/245 (48%), Gaps = 10/245 (4%)
Query: 67 GHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTY 126
G ++ + + +D + T + I+ L +A++LF +++E A+ T
Sbjct: 203 GFIKEALELFQDVKI--KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN--EFTA 258
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
+++ C L ++ + V ++ + E ++ N +++M+ RCG + +AR++F M +
Sbjct: 259 VCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRD 318
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
+D +S+ T+ISGL G EA +F M T ++ A + GL+++G ++
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
Query: 247 HSCALKRGVGEDSFV---ACALIDMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYAL 302
+ ++KR + + C ++D+ + G +E+A + +P E + +++S +
Sbjct: 379 FN-SMKRVFNVEPQIEHYGC-IVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKI 436
Query: 303 RGYSE 307
G E
Sbjct: 437 HGNME 441
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/436 (33%), Positives = 241/436 (55%), Gaps = 16/436 (3%)
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+V G I G+E + N + M+ A K+F + E+D V+W T+IS S
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS----SY 364
Query: 204 NYAEAFEQFLCMWEEFN----DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
N A+ + + +++ + TF +++ S L ++E+ + +C +K G+
Sbjct: 365 NQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKI 421
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
++ ALI YSK G IE A +F++ K+ + WN+IISG+ G+ E L + + +S
Sbjct: 422 EISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
Query: 320 GAKI--DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+I D +T+S ++ IC +SL Q HA ++RHG + + L++ YS+ G ++
Sbjct: 482 EVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQ 541
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSAC 436
++ VF++M K+V+SWN+LI+ Y HG+GE A+ ++ M E +VIP+ TF AVLSAC
Sbjct: 542 NSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSAC 601
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA--PVEPTK 494
S++GL E G EIF SM H V H++C+++LLGR G LDEA +L++ + +
Sbjct: 602 SHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRV 661
Query: 495 NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
++W AL +AC HG+L LGK A+ L E S YV L N+Y+ +G EA + +
Sbjct: 662 DVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAI 721
Query: 555 KRKGLTMLPTCSWIEV 570
G CSW+ +
Sbjct: 722 NMIGAMKQRGCSWMRL 737
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 173/370 (46%), Gaps = 13/370 (3%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF--ADMPERDAVSWMTLISGLV 200
K+V +I GF ++N ++ M+ C +++DA +F D+ RD V++ +I GL
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+ E L + T T V +G Q+H A+K G + +
Sbjct: 269 G----FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL 324
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
V+ A + MYS A VF+ + EK V WN++IS Y + A+S+Y M G
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
K D+FT ++ L LE A +++ G S I + L+ YSK G++E A
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKAD 441
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE--RVIPNHVTFLAVLSACSY 438
+F+R LRKN+ISWNA+I+G+ ++G + +E F +L R++P+ T +LS C
Sbjct: 442 LLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVS 501
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
+ G + + R + K + A +I + + G + + + E W
Sbjct: 502 TSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQNSLEVFNQMS-EKDVVSWN 559
Query: 499 ALLTACRMHG 508
+L++A HG
Sbjct: 560 SLISAYSRHG 569
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 199/485 (41%), Gaps = 80/485 (16%)
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+V Y I +G ++ N +L ++ R G + +K F ++ E D SW TL+S G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 204 NYAEAFEQF--------LCMWEEF-----NDGRSRTFATMVRASAGLGL----------- 239
+ AFE F + +W G T + R LG+
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 240 -------IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQ--MPEKST 290
++ G+Q+HS +K G S V ALI MY C + DA VF++ + +
Sbjct: 198 SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 291 VGWNSIISGYALRGYS-EEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHA 349
V +N +I G A G+ +E+L ++ +M ++ + T V+ C+ A++ H Q H
Sbjct: 258 VTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS-CAAMGH--QVHG 312
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQ 409
++ G+ + + + YS + A VF+ + K++++WN +I+ Y G+
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 410 AIEMFEQMLRERVIPNHVTF--------------------------------LAVLSACS 437
A+ ++++M V P+ TF A++SA S
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE--PTKN 495
+G E+ +F R + + A+ EGL E F+ + + V P
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL--ERFSCLLESEVRILPDAY 490
Query: 496 MWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVM---LLNMYSSSGKLMEAAGVLK 552
LL+ C +L+LG + Y + G+ ++ L+NMYS G + + V
Sbjct: 491 TLSTLLSICVSTSSLMLG--SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFN 548
Query: 553 TLKRK 557
+ K
Sbjct: 549 QMSEK 553
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 97/190 (51%), Gaps = 15/190 (7%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T L+++CV S+ + Y++ +G + + N +++M+ +CG + ++ ++F M
Sbjct: 491 TLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQM 550
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR----SRTFATMVRASAGLGLI 240
E+D VSW +LIS G A + M +E G+ + TF+ ++ A + GL+
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE---GKVIPDAATFSAVLSACSHAGLV 607
Query: 241 EVGRQIHSCALK-RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-----WN 294
E G +I + ++ GV + L+D+ + G +++A+ + ++ EK T+G W
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV-KISEK-TIGSRVDVWW 665
Query: 295 SIISGYALRG 304
++ S A G
Sbjct: 666 ALFSACAAHG 675
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 285 MPEKST--VGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASL 341
+ E ST + N ++G G + AL ++ ++ R + + DQ+++S+ I L
Sbjct: 14 IAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDT 73
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGY 401
Q H +R G + L+ Y + G + + FD + +V SW L++
Sbjct: 74 IFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSAS 133
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
G E A E+F++M ER + + A+++ C SG E E+F M HK+ R
Sbjct: 134 FKLGDIEYAFEVFDKM-PER--DDVAIWNAMITGCKESGYHETSVELFREM---HKLGVR 187
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/558 (30%), Positives = 279/558 (50%), Gaps = 49/558 (8%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS ++ LA + + + LF EL G G T ++ LR + +
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFG--ELRGQGLYPDNFTLPVVLKSIGRLRKVIEGE 66
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSG 203
+V GY + G E D Y+ N ++ M+ G + K+F +MP+RD VSW LIS V +G
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNG 126
Query: 204 NYAEAFEQFLCMWEE----FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
+ +A F M +E F++G T + + A + L +E+G +I+ +
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEG---TIVSTLSACSALKNLEIGERIYRFVVTE-FEMSV 182
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA------------------ 301
+ AL+DM+ KCG ++ A+ VFD M +K+ W S++ GY
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 302 --------LRGYSE-----EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAH 348
+ GY + EAL ++ M+ +G + D F + ++ CA+ +LE K H
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 349 AALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGE 408
+ + D V T LVD Y+K G +E A VF + ++ SW +LI G +G
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+A++++ +M V + +TF+AVL+AC++ G G +IF+SM+ H V+P++ H +C+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 469 IELLGREGLLDEAFALI---RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEP 525
I+LL R GLLDEA LI R E ++ +LL+A R +GN+ + + AEKL +E
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 526 GKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK--S 583
S++ +L ++Y+S+ + + V + +K G+ P CS IE+ + F+ GD S
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLS 542
Query: 584 HTQTKEI---YQKVDNLM 598
H + EI + NLM
Sbjct: 543 HPKMDEINSMLHQTTNLM 560
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 247 bits (630), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/447 (33%), Positives = 231/447 (51%), Gaps = 14/447 (3%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +++ C G+ + R K + Y I E +L V+ M+ +CG A K F +
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P +DAV++ L G G+ +AF+ + M SRT M++ A G
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYALR 303
++ +K G + VA ALI+M++KC ++ A +FD+ EKSTV WN +++GY L
Sbjct: 523 CVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G +EEA++ + +M+ + + T ++R A L++L H++L++ GF S
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
LVD Y+K G +E + F + K ++SWN +++ Y HG A+ +F M +
Sbjct: 643 NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
P+ V+FL+VLSAC ++GL E G IF M HK++ HYACM++LLG+ GL EA
Sbjct: 703 PDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVE 762
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
++R V+ + +W ALL + RMH NL L A +L +EP S YS +
Sbjct: 763 MMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRR 815
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEV 570
L E V + K +P CSWIEV
Sbjct: 816 LGEVNNVSRIKK------VPACSWIEV 836
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 214/461 (46%), Gaps = 49/461 (10%)
Query: 139 IRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISG 198
++G+ + Y + G D+ + ++ M+ +CG + A +LF ++ +RD VSW +I+
Sbjct: 317 VKGIA-IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
+G + EA F M + T ++++ AG+ +G+ IH A+K + +
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESE 435
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
A A+I MY+KCG A F+++P K V +N++ GY G + +A +Y M+
Sbjct: 436 LETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKL 495
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G D T+ +++ CA + + +++HGF S+ L++ ++K +
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 379 ARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA-- 435
A +FD+ K+ +SWN ++ GY HGQ E+A+ F QM E+ PN VTF+ ++ A
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 436 --------------------CSYS-------------GLSERGWEIFYSMSRDHKVKPRA 462
CS + G+ E + F +S + V
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS--- 672
Query: 463 MHYACMIELLGREGLLDEAFALIRSA---PVEPTKNMWVALLTACRMHGNLVLGKFAAEK 519
+ M+ GL A +L S ++P ++++L+ACR G + GK E+
Sbjct: 673 --WNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEE 730
Query: 520 L---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+ + +E ++ Y ++++ +G EA +++ ++ K
Sbjct: 731 MGERHKIE-AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 186/394 (47%), Gaps = 12/394 (3%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
++EA+ F + E G D ++ + C G + R+ + G E D+Y+
Sbjct: 80 HREALGFFGYMS-EEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
++ M+ + ++ AR++F M +D V+W T++SGL +G + A F M D
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV---ACALIDMYSKCGSIEDA 278
+ ++ A + L +V R +H +K+G F+ + LIDMY C + A
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG-----FIFAFSSGLIDMYCNCADLYAA 253
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+ VF+++ K W ++++ YA G+ EE L ++ MR+ ++++ + ++ A +
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALI 398
L H V+ G D+ T L+ YSK G +E A +F + ++V+SW+A+I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-YSMSRDHK 457
A Y GQ ++AI +F M+R + PN VT +VL C+ S G I Y++ D
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD-- 431
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
++ +I + + G A P++
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 178/385 (46%), Gaps = 5/385 (1%)
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA 206
G +I GF + ++ M+ C + A +F ++ +D SW T+++ +G +
Sbjct: 225 GLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 207 EAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI 266
E E F M A+ ++A+A +G + G IH A+++G+ D VA +L+
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLM 342
Query: 267 DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQF 326
MYSKCG +E A+ +F + ++ V W+++I+ Y G +EA+S++ +M K +
Sbjct: 343 SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAV 402
Query: 327 TISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM 386
T++ V++ CA +A+ K H ++ S++ T ++ Y+K GR A F+R+
Sbjct: 403 TLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERL 462
Query: 387 LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
K+ +++NAL GY G +A ++++ M V P+ T + +L C++ RG
Sbjct: 463 PIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG- 521
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRM 506
Y H +I + + L A L E + W ++ +
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 507 HGNL--VLGKFAAEKLYGMEPGKLS 529
HG + F K+ +P ++
Sbjct: 582 HGQAEEAVATFRQMKVEKFQPNAVT 606
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 157/314 (50%), Gaps = 9/314 (2%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
++ R + +V G +I +G +P ++N + R L +R +F + + V W ++I
Sbjct: 16 KNFRCLLQVHGSLIVSGLKPHNQLIN-AYSLFQRQDL---SRVIFDSVRDPGVVLWNSMI 71
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
G +G + EA F M EE D +F ++A AG + G +IH + G+
Sbjct: 72 RGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGL 131
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
D ++ AL++MY K + A+ VFD+M K V WN+++SG A G S AL ++ +
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA-NTGLVDFYSKWG 374
MR ID ++ +I ++L + + H +++ GF I A ++GL+D Y
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCA 248
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+ A VF+ + RK+ SW ++A Y ++G E+ +E+F+ M V N V + L
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQ 308
Query: 435 ACSYSGLSERGWEI 448
A +Y G +G I
Sbjct: 309 AAAYVGDLVKGIAI 322
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/482 (30%), Positives = 243/482 (50%), Gaps = 36/482 (7%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K++ +I +G +M+ +++ + M A +LF + + + ++I +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 203 GNYAEA---FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
Y + ++Q L E D TF M ++ A LG +G+Q+H K G
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPD--RFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHV 144
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA------------------ 301
ALIDMY K + DA VFD+M E+ + WNS++SGYA
Sbjct: 145 VTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK 204
Query: 302 --------LRGYSE-----EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAH 348
+ GY+ EA+ + EM+ +G + D+ ++ V+ CA+L SLE K H
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 349 AALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGE 408
R GF L++ YSK G + A +F +M K+VISW+ +I+GY HG
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
AIE F +M R +V PN +TFL +LSACS+ G+ + G F M +D++++P+ HY C+
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL 528
I++L R G L+ A + ++ P++P +W +LL++CR GNL + A + L +EP +
Sbjct: 385 IDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDM 444
Query: 529 SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTK 588
+YV+L N+Y+ GK + + + K ++ + + P S IEV F+ GD S
Sbjct: 445 GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWT 504
Query: 589 EI 590
EI
Sbjct: 505 EI 506
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 8/297 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +AL+++ + + +VF M +E D+ N +L + R G M A+ LF M
Sbjct: 146 TENALIDMYMKFDDLVDAHKVFDEM----YERDVISWNSLLSGYARLGQMKKAKGLFHLM 201
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
++ VSW +ISG G Y EA + F M + + +++ + A LG +E+G+
Sbjct: 202 LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
IH A +RG + + V ALI+MYSKCG I A +F QM K + W+++ISGYA G
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHG 321
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD--IVA 362
+ A+ + EM+ + K + T ++ C+ + + + + ++R + + I
Sbjct: 322 NAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR-YFDMMRQDYQIEPKIEH 380
Query: 363 NTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
L+D ++ G++E A + M ++ + W +L++ G + A+ + ++
Sbjct: 381 YGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 28/320 (8%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y EAMD F ++L G D + +++ C L S+ K + Y GF +
Sbjct: 222 YVEAMDFFREMQLAGIEPD--EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVC 279
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ M+ +CG++ A +LF M +D +SW T+ISG GN A E F M
Sbjct: 280 NALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF--VACALIDMYSKCGSIEDAQ 279
TF ++ A + +G+ + G + + E C LID+ ++ G +E A
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC-LIDVLARAGKLERAV 398
Query: 280 CVFDQMPEK-STVGWNSIISGYALRGYSEEALS-----IYLEMRDSGAKIDQFTISIVIR 333
+ MP K + W S++S G + AL + LE D G + ++
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYV------LLAN 452
Query: 334 ICARLASLEHAKQAHAALVRHGF-----GSDIVANTGLVDFYSK------WGRMEDARHV 382
I A L E + + GS I N + +F S W + +
Sbjct: 453 IYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQL 512
Query: 383 FDRMLRKNVISWNALIAGYG 402
F ++VI+ N +A G
Sbjct: 513 FTSHQDQDVITNNNALAFIG 532
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 127/306 (41%), Gaps = 35/306 (11%)
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
I R+ S K+ +A+++ HG T +VDF K M+ A +F+++ NV
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNV 73
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERV-IPNHVTFLAVLSACSYSGLSERGWEIFY 450
+N++I Y ++ I +++Q+LR+ +P+ TF + +C+ G G ++
Sbjct: 74 FLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHG 133
Query: 451 SM----SRDHKVKPRAM--HYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTAC 504
+ R H V A+ Y +L+ + DE + E W +LL+
Sbjct: 134 HLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMY--------ERDVISWNSLLSGY 185
Query: 505 RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG------ 558
G + K A + M + S+ +++ Y+ G +EA + ++ G
Sbjct: 186 ARLGQM---KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 559 --LTMLPTCS---------WIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYI 607
+++LP+C+ WI + + FL E+Y K + I G +
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 608 EEHEML 613
E +++
Sbjct: 303 EGKDVI 308
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 18/493 (3%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G D TY ++N C L S K + +I + DL + N +L M+ CG M +A
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 178 RKLFADMPERDAVSWMTLISGLVDSGNYAEA---FEQFLCMWEEFNDGRSRTFATMVRAS 234
+F + + VSW ++ISG ++G +A + + L M D TF+ + A+
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD--EYTFSAAISAT 412
Query: 235 AGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN 294
A G+ +H K G FV L+ MY K E AQ VFD M E+ V W
Sbjct: 413 AEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWT 472
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+I G++ G SE A+ ++EM + D F++S VI C+ +A L + H +R
Sbjct: 473 EMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRT 532
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
GF + LVD Y K G+ E A +F ++ WN+++ Y HG E+A+ F
Sbjct: 533 GFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFF 592
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
EQ+L +P+ VT+L++L+ACS+ G + +G + ++ ++ +K HY+CM+ L+ +
Sbjct: 593 EQILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSK 651
Query: 475 EGLLDEAFALIRSAPVEPTKN---MWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSY 531
GL+DEA LI +P P N +W LL+AC NL +G +AAE++ ++P +++
Sbjct: 652 AGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATH 709
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEV-KKQPYAFLCGDKSHTQTKEI 590
++L N+Y+ +G+ + A + + ++ + P SWIEV F GD+S+ +
Sbjct: 710 ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEV--- 766
Query: 591 YQKVDNLMDEISR 603
V DE++R
Sbjct: 767 ---VSQAQDELNR 776
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 168/320 (52%), Gaps = 5/320 (1%)
Query: 123 GSTYDALVNVCVGLRSIRGVKRVFGYMISNGF---EPDLYMMNRVLHMHVRCGLMLDARK 179
S+ L CV + ++ +++ +++ G Y N ++ M+VRCG + ARK
Sbjct: 94 ASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARK 153
Query: 180 LFADMPERDAVSWMTLISGLVDSGNYAE-AFEQFLCMWEEFNDGRSRTFATMVRASAGLG 238
+F MP R+ VS+ L S + ++A AF M E+ S TF ++V+ A L
Sbjct: 154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE 213
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
+ +G ++S +K G ++ V +++ MYS CG +E A+ +FD + + V WN++I
Sbjct: 214 DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIV 273
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
G E+ L + M SG QFT SIV+ C++L S K HA ++ +
Sbjct: 274 GSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA 333
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
D+ + L+D Y G M +A +VF R+ N++SWN++I+G +G GEQA+ M+ ++L
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 419 RERVI-PNHVTFLAVLSACS 437
R P+ TF A +SA +
Sbjct: 394 RMSTPRPDEYTFSAAISATA 413
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 6/441 (1%)
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
ST+ +LV VC L + + +I G+ ++ + VL M+ CG + AR++F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 182 ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE 241
+ RDAV+W T+I G + + + F M D T++ ++ + LG
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYA 301
+G+ IH+ + D + AL+DMY CG + +A VF ++ + V WNSIISG +
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 302 LRGYSEEALSIYLE-MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G+ E+A+ +Y +R S + D++T S I A H K H + + G+ +
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
T L+ Y K E A+ VFD M ++V+ W +I G+ G E A++ F +M RE
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDE 480
+ + + +V+ ACS + +G E+F+ ++ ++++ G+ G +
Sbjct: 498 KNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYET 556
Query: 481 AFALIRSAPVEPTKNMWVALLTACRMHGNL--VLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
A I S P W ++L A HG + L F G P + +Y+ LL
Sbjct: 557 A-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAV-TYLSLLAAC 614
Query: 539 SSSGKLMEAAGVLKTLKRKGL 559
S G ++ + +K +G+
Sbjct: 615 SHRGSTLQGKFLWNQMKEQGI 635
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 173/367 (47%), Gaps = 26/367 (7%)
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWM-------------TLISGLVDSGNY 205
Y N ++ M+VRC + ARK+F MP+R+ V+ +L S ++ G++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG---EDSFVA 262
F F+ + E + + + R + +++ RQIH+ L G G E +
Sbjct: 83 QMIF--FMPLNE-----IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYAN 135
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR-GYSEEALSIYLEMRDSGA 321
LI MY +CGS+E A+ VFD+MP ++ V +N++ S Y+ ++ A + M
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
K + T + ++++CA L + ++ +++ G+ ++V T ++ YS G +E AR
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
+FD + ++ ++WN +I G + + E + F ML V P T+ VL+ CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALL 501
G I + + + A ++++ G + EAF + P W +++
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNA-LLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSII 373
Query: 502 TACRMHG 508
+ C +G
Sbjct: 374 SGCSENG 380
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 237 bits (604), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 223/415 (53%), Gaps = 7/415 (1%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVS-----WMTLISGLVDSG 203
++ +G E + ++ ++ M+ CG ++ A +F E+ AV+ W +++SG + +
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ--EKLAVNSSVAVWNSMLSGFLINE 321
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC 263
A L +++ S T + ++ + +G Q+HS + G D V
Sbjct: 322 ENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS 381
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
L+D+++ G+I+DA +F ++P K + ++ +I G G++ A ++ E+ G
Sbjct: 382 ILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDA 441
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
DQF +S ++++C+ LASL KQ H ++ G+ S+ V T LVD Y K G +++ +F
Sbjct: 442 DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLF 501
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
D ML ++V+SW +I G+G +G+ E+A F +M+ + PN VTFL +LSAC +SGL E
Sbjct: 502 DGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLE 561
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
+M ++ ++P HY C+++LLG+ GL EA LI P+EP K +W +LLTA
Sbjct: 562 EARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA 621
Query: 504 CRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
C H N L AEKL P S Y L N Y++ G + + V + K+ G
Sbjct: 622 CGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG 676
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 206/435 (47%), Gaps = 45/435 (10%)
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
P N ++ + + GLM +A LF MP+ + VSW LISG VD G+ A E +
Sbjct: 169 LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLV 227
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG 273
M E ++A + GL+ +G+Q+H C +K G+ F ALIDMYS CG
Sbjct: 228 RMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCG 287
Query: 274 SIEDAQCVFDQ--MPEKSTVG-WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
S+ A VF Q + S+V WNS++SG+ + +E AL + L++ S D +T+S
Sbjct: 288 SLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSG 347
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
++IC +L Q H+ +V G+ D + + LVD ++ G ++DA +F R+ K+
Sbjct: 348 ALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKD 407
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW--EI 448
+I+++ LI G G A +F ++++ + + +L C S L+ GW +I
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVC--SSLASLGWGKQI 465
Query: 449 F-YSMSRDHKVKPRA------MHYAC-----------------------MIELLGREGLL 478
+ + ++ +P M+ C +I G+ G +
Sbjct: 466 HGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRV 525
Query: 479 DEAFALIR---SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSYV 532
+EAF + +EP K ++ LL+ACR G L + E + YG+EP L Y
Sbjct: 526 EEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP-YLEHYY 584
Query: 533 MLLNMYSSSGKLMEA 547
++++ +G EA
Sbjct: 585 CVVDLLGQAGLFQEA 599
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 46/314 (14%)
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
G I + +K+G+ ++ F+A +I MY + DA VFD+M E++ V W +++SGY
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 303 RGYSEEALSIYLEMRDSGAK-IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
G +A+ +Y M DS + ++F S V++ C + ++ + + + D+V
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
+VD Y K GR+ +A F +LR + SWN LI+GY G ++A+ +F +M +
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ-- 201
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
PN V++ C SG ++G PRA+ + ++ REGL+ +
Sbjct: 202 --PNVVSW-----NCLISGFVDKG-------------SPRALEFLVRMQ---REGLVLDG 238
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGK--FAAEKLYGME--PGKLSSYVMLLNM 537
FAL P L AC G L +GK G+E P +S+ L++M
Sbjct: 239 FAL-------PCG------LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISA---LIDM 282
Query: 538 YSSSGKLMEAAGVL 551
YS+ G L+ AA V
Sbjct: 283 YSNCGSLIYAADVF 296
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 159/345 (46%), Gaps = 40/345 (11%)
Query: 132 VCVGLR---SIRGVKR---VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
+ GLR ++ KR + ++I G ++++ N V+ M+V L+ DA K+F +M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL-GLIEVGR 244
ER+ V+W T++SG G +A E + M + + + + V + GL G I++G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
++ K + D + +++DMY K G + +A F ++ S+ WN++ISGY G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 305 YSEEALSIY------------------------------LEMRDSGAKIDQFTISIVIRI 334
+EA++++ + M+ G +D F + ++
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 335 CARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR---MLRKNV 391
C+ L KQ H +V+ G S A + L+D YS G + A VF + + +V
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
WN++++G+ + + E A+ + Q+ + + + T L C
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKIC 352
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 32/212 (15%)
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
+D I+ +R C ++ + + + A +++ G ++ ++ Y + + DA V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML-RERVIPNHVTFLAVLSACSYSGL 441
FD M +N+++W +++GY + G+ +AIE++ +ML E N + AVL AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 442 SERGWEIFYSMSRDHK------------------------------VKPRAMHYACMIEL 471
+ G ++ + +++ ++P + + +I
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 472 LGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
+ GL+DEA L P +P W L++
Sbjct: 183 YCKAGLMDEAVTLFHRMP-QPNVVSWNCLISG 213
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
EL G D ++ VC L S+ K++ G I G+E + ++ M+V+CG
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 173 LMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
+ + LF M ERD VSW +I G +G EAF F M + TF ++
Sbjct: 493 EIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLS 552
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVA--CALIDMYSKCGSIEDAQCVFDQMP-EKS 289
A GL+E R +K G + ++ ++D+ + G ++A + ++MP E
Sbjct: 553 ACRHSGLLEEARSTLE-TMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 290 TVGWNSIISG 299
W S+++
Sbjct: 612 KTIWTSLLTA 621
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 243/498 (48%), Gaps = 39/498 (7%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
+++ +K+ YMI G D + + + G + A +F P + T+I
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 197 SGL--VDSGN-YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKR 253
L +D N ++ A + +W + TF +++ + + + GRQIH +
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 254 GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKST----------------------- 290
G V LI MY CG + DA+ +FD+M K
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLL 205
Query: 291 ----------VGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
V W +ISGYA G + EA+ ++ M + D+ T+ V+ CA L S
Sbjct: 206 EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGS 265
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAG 400
LE ++ + + G + N ++D Y+K G + A VF+ + +NV++W +IAG
Sbjct: 266 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 325
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
HG G +A+ MF +M++ V PN VTF+A+LSACS+ G + G +F SM + + P
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
HY CMI+LLGR G L EA +I+S P + +W +LL A +H +L LG+ A +L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCG 580
+EP +Y++L N+YS+ G+ E+ + +K G+ + S IEV+ + Y F+ G
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 581 DKSHTQTK---EIYQKVD 595
D +H Q + EI Q++D
Sbjct: 506 DLTHPQVERIHEILQEMD 523
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 161/339 (47%), Gaps = 41/339 (12%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ + V + + +++ G ++ GF+ ++++ ++ M+ CG + DARK+F +M
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 185 PERDA---------------------------------VSWMTLISGLVDSGNYAEAFEQ 211
+D VSW +ISG SG +EA E
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
F M E + T ++ A A LG +E+G +I S RG+ + A+IDMY+K
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
G+I A VF+ + E++ V W +II+G A G+ EAL+++ M +G + + T +
Sbjct: 298 SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 332 IRICARLASLEHAKQAHAAL-VRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRK 389
+ C+ + ++ K+ ++ ++G +I ++D + G++ +A V M +
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRE--RVIPNH 426
N W +L+A H +E+ E+ L E ++ PN+
Sbjct: 418 NAAIWGSLLAASNVH----HDLELGERALSELIKLEPNN 452
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/535 (28%), Positives = 265/535 (49%), Gaps = 39/535 (7%)
Query: 99 CNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFE-PD 157
C +K A LF L +GD T +++ VC L + K + Y++ + + D
Sbjct: 308 CEWFK-AFQLFHNLVHKGD-VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
+ N ++ + R G A F+ M +D +SW ++ DS + +
Sbjct: 366 TSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLN 425
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV---GEDSFVACALIDMYSKCGS 274
E S T ++++ + I +++H ++K G+ E+ + AL+D Y+KCG+
Sbjct: 426 EAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGN 485
Query: 275 IEDAQCVFDQMPEKST-VGWNSIISGYA--------------------------LRGYSE 307
+E A +F + E+ T V +NS++SGY +R Y+E
Sbjct: 486 VEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAE 545
Query: 308 -----EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
EA+ ++ E++ G + + TI ++ +CA+LASL +Q H ++R G G DI
Sbjct: 546 SCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRL 604
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
L+D Y+K G ++ A VF R++++ + A++AGY HG+G++A+ ++ M +
Sbjct: 605 KGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNI 664
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
P+HV +L+AC ++GL + G +I+ S+ H +KP YAC ++L+ R G LD+A+
Sbjct: 665 KPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAY 724
Query: 483 ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+ + PVEP N+W LL AC + + LG A L E ++V++ NMY++
Sbjct: 725 SFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADA 784
Query: 543 KLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
K + +K+K + CSW+EV Q F+ GD SH + I+ V+ L
Sbjct: 785 KWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 227/485 (46%), Gaps = 29/485 (5%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+E M F+ + D T+ ++ +CV L K + Y+I G E D + N
Sbjct: 103 RETMRFFKAMHF-ADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGN 161
Query: 163 RVLHMHVRCGLML-DARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
++ M+ + G + DA F + ++D VSW +I+G ++ A+AF F M +E +
Sbjct: 162 ALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE 221
Query: 222 GRSRTFATMVRASAGLG---LIEVGRQIHSCALKRG-VGEDSFVACALIDMYSKCGSIED 277
T A ++ A + GRQIHS ++R + FV +L+ Y + G IE+
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEE 281
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG-AKIDQFTISIVIRICA 336
A +F +M K V WN +I+GYA +A ++ + G D TI ++ +CA
Sbjct: 282 AASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Query: 337 RLASLEHAKQAHAALVRHGF-GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+L L K+ H+ ++RH + D L+ FY+++G A F M K++ISWN
Sbjct: 342 QLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC-SYSGLSE----RGWEIFY 450
A++ + + + Q + + +L E + + VT L++L C + G+ + G+ +
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 451 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
+ D + +P+ + +++ + G ++ A + T + +LL+ G+
Sbjct: 462 GLLHDEE-EPKLGN--ALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGS- 517
Query: 511 VLGKFAAEKLYG-MEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG--------LTM 561
A+ L+ M L+++ +++ +Y+ S EA GV + ++ +G + +
Sbjct: 518 ---HDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNL 574
Query: 562 LPTCS 566
LP C+
Sbjct: 575 LPVCA 579
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 166/331 (50%), Gaps = 10/331 (3%)
Query: 114 LEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGL 173
L G G D + +V C + + + + G + G + VL+M+ +C
Sbjct: 14 LSGFGTD--HRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRR 71
Query: 174 MLDARKLFADMPERDAVSWMTLISGL-VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
M D +K+F M D V W +++GL V G F + + +E S TFA ++
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADE-PKPSSVTFAIVLP 130
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI-EDAQCVFDQMPEKSTV 291
LG G+ +HS +K G+ +D+ V AL+ MY+K G I DA FD + +K V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 292 GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL---ASLEHAKQAH 348
WN+II+G++ +A + M + + TI+ V+ +CA + + +Q H
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 349 AALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG 407
+ +V R + + LV FY + GR+E+A +F RM K+++SWN +IAGY ++ +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 408 EQAIEMFEQMLRE-RVIPNHVTFLAVLSACS 437
+A ++F ++ + V P+ VT +++L C+
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCA 341
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 130/353 (36%), Gaps = 55/353 (15%)
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
SG D V++ CA ++ L + H + + G + + +++ Y+K RM+D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM-LRERVIPNHVTFLAVLSAC- 436
+ +F +M + + WN ++ G + G + + F+ M + P+ VTF VL C
Sbjct: 75 CQKMFRQMDSLDPVVWNIVLTGL-SVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCV 133
Query: 437 ----SYSGLSERGWEIFYSMSRDHKVK--------------PRA------------MHYA 466
SY+G S + I + +D V P A + +
Sbjct: 134 RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWN 193
Query: 467 CMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTAC-RMHGNLVLGKFAAEKLYG 522
+I ++ +A F L+ P EP +L C M N+ Y
Sbjct: 194 AIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Query: 523 MEPGKLSSYVMLLN----MYSSSGKLMEAAGVLKTLKRKGLT--------MLPTCSWIEV 570
++ L ++V + N Y G++ EAA + + K L C W +
Sbjct: 254 VQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKA 313
Query: 571 KKQPYAFL-CGDKSHTQTK-----EIYQKVDNLMDEISRHGYIEEHEMLLPDV 617
+ + + GD S + ++ +L H YI H LL D
Sbjct: 314 FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 252/501 (50%), Gaps = 47/501 (9%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R++E++ +++ + +G AD TY +++ C L + V G + + +LY+
Sbjct: 164 RFQESVSVYKRMMSKGIRAD--EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF----------- 209
N ++ M+ R G + AR+LF M ERDAVSW +I+ EAF
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 210 EQFLCMWEEFNDG----------------------RSRTFATM--VRASAGLGLIEVGRQ 245
E + W G R + A + ++A + +G ++ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 246 IH-----SCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
H SC+ + V +LI MYS+C + A VF Q+ S WNSIISG+
Sbjct: 342 FHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD- 359
A SEE + EM SG + T++ ++ + AR+ +L+H K+ H ++R D
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
++ LVD Y+K G + A+ VFD M +++ +++ +LI GYG G+GE A+ F+ M R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
+ P+HVT +AVLSACS+S L G +F M ++ R HY+CM++L R G LD
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK-LYGMEPGKLSSYVMLLNMY 538
+A + + P EP+ M LL AC +HGN +G++AA+K L +P L Y++L +MY
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 539 SSSGKLMEAAGVLKTLKRKGL 559
+ +G + V L G+
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGV 659
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/532 (21%), Positives = 223/532 (41%), Gaps = 89/532 (16%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA F +L + + + +L++ CVG +++ + IS+G E D ++ +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ + L+ +A+ + + + W LI + + + E+ + M +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
T+ ++++A A L GR +H + +V ALI MY + G ++ A+ +FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 284 QMPEKSTVGWNSIISGYA----------------LRGYSEE------------------- 308
+M E+ V WN+II+ Y L G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH-GFGSDI--VANTG 365
AL+ + MR+ +I + ++ C+ + +L+ K H ++R F DI V N+
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS- 362
Query: 366 LVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
L+ YS+ + A VF ++ ++ +WN++I+G+ + + E+ + ++ML PN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 426 HVTFLAVLSACSYSGLSERGWE------------------------------------IF 449
H+T ++L + G + G E +F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS---APVEPTKNMWVALLTACRM 506
SM + KV Y +I+ GR G + A A + + ++P VA+L+AC
Sbjct: 483 DSMRKRDKVT-----YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS- 536
Query: 507 HGNLVL-GKF---AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
H NLV G + E ++G+ +L Y ++++Y +G L +A + T+
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRL-RLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIEVGRQIHSCALKRGV 255
+ G EAF F + + G + A+++ G G+Q+H+ + G+
Sbjct: 57 ISHGQLYEAFRTFSLL--RYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
DS + L+ YS +++AQ + + + WN +I Y +E++S+Y
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G + D+FT VI+ CA L + + H ++ ++ L+ Y ++G+
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
++ AR +FDRM ++ +SWNA+I Y + + +A ++ ++M V + VT+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 436 CSYSG 440
C +G
Sbjct: 295 CLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/501 (31%), Positives = 252/501 (50%), Gaps = 47/501 (9%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R++E++ +++ + +G AD TY +++ C L + V G + + +LY+
Sbjct: 164 RFQESVSVYKRMMSKGIRAD--EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF----------- 209
N ++ M+ R G + AR+LF M ERDAVSW +I+ EAF
Sbjct: 222 CNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 210 EQFLCMWEEFNDG----------------------RSRTFATM--VRASAGLGLIEVGRQ 245
E + W G R + A + ++A + +G ++ G+
Sbjct: 282 EASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKV 341
Query: 246 IH-----SCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
H SC+ + V +LI MYS+C + A VF Q+ S WNSIISG+
Sbjct: 342 FHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGF 398
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD- 359
A SEE + EM SG + T++ ++ + AR+ +L+H K+ H ++R D
Sbjct: 399 AYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDC 458
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
++ LVD Y+K G + A+ VFD M +++ +++ +LI GYG G+GE A+ F+ M R
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
+ P+HVT +AVLSACS+S L G +F M ++ R HY+CM++L R G LD
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEK-LYGMEPGKLSSYVMLLNMY 538
+A + + P EP+ M LL AC +HGN +G++AA+K L +P L Y++L +MY
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 539 SSSGKLMEAAGVLKTLKRKGL 559
+ +G + V L G+
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGV 659
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/532 (21%), Positives = 223/532 (41%), Gaps = 89/532 (16%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA F +L + + + +L++ CVG +++ + IS+G E D ++ +
Sbjct: 64 EAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK 123
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ + L+ +A+ + + + W LI + + + E+ + M +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
T+ ++++A A L GR +H + +V ALI MY + G ++ A+ +FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 284 QMPEKSTVGWNSIISGYA----------------LRGYSEE------------------- 308
+M E+ V WN+II+ Y L G
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH-GFGSDI--VANTG 365
AL+ + MR+ +I + ++ C+ + +L+ K H ++R F DI V N+
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNS- 362
Query: 366 LVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
L+ YS+ + A VF ++ ++ +WN++I+G+ + + E+ + ++ML PN
Sbjct: 363 LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPN 422
Query: 426 HVTFLAVLSACSYSGLSERGWE------------------------------------IF 449
H+T ++L + G + G E +F
Sbjct: 423 HITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS---APVEPTKNMWVALLTACRM 506
SM + KV Y +I+ GR G + A A + + ++P VA+L+AC
Sbjct: 483 DSMRKRDKVT-----YTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS- 536
Query: 507 HGNLVL-GKF---AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
H NLV G + E ++G+ +L Y ++++Y +G L +A + T+
Sbjct: 537 HSNLVREGHWLFTKMEHVFGIRL-RLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 6/245 (2%)
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIEVGRQIHSCALKRGV 255
+ G EAF F + + G + A+++ G G+Q+H+ + G+
Sbjct: 57 ISHGQLYEAFRTFSLL--RYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGL 114
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
DS + L+ YS +++AQ + + + WN +I Y +E++S+Y
Sbjct: 115 EFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKR 174
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G + D+FT VI+ CA L + + H ++ ++ L+ Y ++G+
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
++ AR +FDRM ++ +SWNA+I Y + + +A ++ ++M V + VT+ +
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 436 CSYSG 440
C +G
Sbjct: 295 CLEAG 299
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 251/479 (52%), Gaps = 11/479 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFE-PDLYMMNRVLHMHVRCGLMLDARKLFAD 183
T +++ C + I + V G+ I GF+ D+++ N ++ M+ + + A ++F +
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE 287
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
R+ VSW ++++G V + Y EA E F M +E + T +++R
Sbjct: 288 TTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPC 347
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+ IH ++RG + +LID Y+ C ++DA V D M K V +++ISG A
Sbjct: 348 KSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG-SDIVA 362
G S+EA+SI+ MRD+ I T+ ++ C+ A L +K AH +R +DI
Sbjct: 408 GRSDEAISIFCHMRDTPNAI---TVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
T +VD Y+K G +E AR FD++ KN+ISW +I+ Y +G ++A+ +F++M ++
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSM-SRDHKVKPRAMHYACMIELLGREGLLDEA 481
PN VT+LA LSAC++ GL ++G IF SM DHK P HY+C++++L R G +D A
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTA 582
Query: 482 FALIRSAP--VEPTKNMWVALLTACRMH-GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
LI++ P V+ + W A+L+ CR L++ ++ +EP S Y++ + +
Sbjct: 583 VELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTF 642
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNL 597
++ + A + + +K + + ++ S + FL GDK E+ V +L
Sbjct: 643 AAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 214/450 (47%), Gaps = 43/450 (9%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+++ GY+I +GF + N +L M+ L ARKLF +M ERD +SW +I V S
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSD-SLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 203 GNYAEAFEQFLCMWEEF-NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-EDSF 260
+ F M E + T ++++A + I+VGR +H +++RG D F
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
V +LIDMYSK ++ A VFD+ ++ V WNSI++G+ +EAL ++ M
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
++D+ T+ ++R+C K H ++R G+ S+ VA + L+D Y+ ++DA
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG 440
V D M K+V+S + +I+G + G+ ++AI +F M R PN +T +++L+ACS S
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSA 440
Query: 441 -LSERGWEIFYSMSR------------------------------DHKVKPRAMHYACMI 469
L W ++ R D + + + +I
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 470 ELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPG 526
GL D+A AL ++ P ++A L+AC HG LV K E
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACN-HGGLVKKGLMIFKSMVEEDH 559
Query: 527 K--LSSYVMLLNMYSSSGKLMEAAGVLKTL 554
K L Y +++M S +G++ A ++K L
Sbjct: 560 KPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 179/391 (45%), Gaps = 35/391 (8%)
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
L+ N + +++CG + + F M RD+VSW ++ GL+D G E F +
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+ + T ++ A L G +IH ++ G S V +++ MY+ S+
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS- 177
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICA 336
A+ +FD+M E+ + W+ +I Y L ++ EM ++ + D T++ V++ C
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 337 RLASLEHAKQAHAALVRHGFG-SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+ ++ + H +R GF +D+ L+D YSK ++ A VFD +N++SWN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY-----------SGLSER 444
+++AG+ ++ + ++A+EMF M++E V + VT +++L C + + R
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 445 GWE-------------IFYSMSRDHKVKPRAMHY------ACMIELLGREGLLDEAFALI 485
G+E S+ D +M Y + MI L G DEA ++
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
P ++LL AC + +L K+A
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 179/392 (45%), Gaps = 26/392 (6%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
RY EA+++F ++ E +V T +L+ VC K + G +I G+E +
Sbjct: 307 QRYDEALEMFHLMVQEA--VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
++ ++ + C L+ DA + M +D VS T+ISGL +G EA F M +
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP 424
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDA 278
N + T +++ A + + + H A++R + D V +++D Y+KCG+IE A
Sbjct: 425 N---AITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+ FDQ+ EK+ + W IIS YA+ G ++AL+++ EM+ G + T + C
Sbjct: 482 RRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHG 541
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM---LRKNVISWN 395
++ ++V + + +VD S+ G ++ A + + ++ +W
Sbjct: 542 GLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWG 601
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY-----SGLSERGWEIFY 450
A+++G N F++++ + V L L + Y + +E+ WE
Sbjct: 602 AILSGCRNR---------FKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVA 652
Query: 451 SMSRDHKVKPRAMHYACMIELLGREGLLDEAF 482
M R VK R + ++ REG L + F
Sbjct: 653 MMRR--LVKERKVRVVAGYSMV-REGNLAKRF 681
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 233 bits (594), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 218/385 (56%), Gaps = 11/385 (2%)
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE 287
T++ A A LG + R++ KR V V A+I Y + G ++ A +FD MP
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVP----VWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 288 KSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQ 346
K+ W ++ISG++ G EAL ++L M +D K + T+ V+ CA L LE ++
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 347 AHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHG 405
+GF +I ++ YSK G ++ A+ +F+ + ++N+ SWN++I HG
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
+ ++A+ +F QMLRE P+ VTF+ +L AC + G+ +G E+F SM HK+ P+ HY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 466 ACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEP 525
CMI+LLGR G L EA+ LI++ P++P +W LL AC HGN+ + + A+E L+ +EP
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 526 GKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW-IEVKKQPYAFLCGDKSH 584
+ V++ N+Y+++ K + K +K++ +T S+ +EV + F DKSH
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSH 476
Query: 585 TQTKEIYQKVDNLMDEISRHGYIEE 609
++ EIYQ +++EI R +E+
Sbjct: 477 PRSYEIYQ----VLEEIFRRMKLEK 497
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 147/287 (51%), Gaps = 8/287 (2%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER 187
L+ L ++ +RVF M D+ + N ++ + R G M A +LF MP +
Sbjct: 122 TLITAYAKLGALCCARRVFDEMSKR----DVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 188 DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGRQI 246
+ SW T+ISG +GNY+EA + FLCM ++ + + T +++ A A LG +E+GR++
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 247 HSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM-PEKSTVGWNSIISGYALRGY 305
A + G ++ +V A I+MYSKCG I+ A+ +F+++ +++ WNS+I A G
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 306 SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR-HGFGSDIVANT 364
+EAL+++ +M G K D T ++ C + ++ ++ H +
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 365 GLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQA 410
++D + G++++A + M ++ + + W L+ HG E A
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 8/217 (3%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+Q+H+ L+ GV E L+ ++ A+ +FD T +N +I Y +
Sbjct: 5 KQLHAHCLRTGVDETK----DLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
E++ +Y + G + T + + A +S + H+ R GF SD
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
T L+ Y+K G + AR VFD M +++V WNA+I GY G + A+E+F+ M R+ V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNV- 179
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
++ V+S S +G ++F M +D VKP
Sbjct: 180 ---TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 226/433 (52%), Gaps = 7/433 (1%)
Query: 140 RGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL 199
+G++ + G I +G D + ++ + + GL+++A KLF +P+ D W +I G
Sbjct: 123 KGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL---GLIEVGRQIHSCALKRGVG 256
G + + F M G TMV ++GL L+ V +H+ LK +
Sbjct: 183 GCCGFWDKGINLFNLMQHR---GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLD 239
Query: 257 EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM 316
S+V CAL++MYS+C I A VF+ + E V +S+I+GY+ G +EAL ++ E+
Sbjct: 240 SHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 317 RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRM 376
R SG K D ++IV+ CA L+ K+ H+ ++R G DI + L+D YSK G +
Sbjct: 300 RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLL 359
Query: 377 EDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
+ A +F + KN++S+N+LI G G HG A E F ++L +IP+ +TF A+L C
Sbjct: 360 KCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
+SGL +G EIF M + ++P+ HY M++L+G G L+EAF + S +
Sbjct: 420 CHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Query: 497 WVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSY-VMLLNMYSSSGKLMEAAGVLKTLK 555
ALL+ C +H N L + AE ++ + S Y VML N+Y+ G+ E + +
Sbjct: 480 LGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Query: 556 RKGLTMLPTCSWI 568
LP SW
Sbjct: 540 ESYGGKLPGISWF 552
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 189/457 (41%), Gaps = 49/457 (10%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
+++ ++ + D Y ++ + ++ ARKLF PER W ++I
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAK 83
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+ + F + + T+A + R + + R IH A+ G+G D
Sbjct: 84 AHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
A++ YSK G I +A +F +P+ WN +I GY G+ ++ ++++ M+ G
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 203
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
+ + +T+ + + L A HA ++ S LV+ YS+ + A
Sbjct: 204 QPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACS 263
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC----- 436
VF+ + ++++ ++LI GY G ++A+ +F ++ P+ V VL +C
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP------- 489
S SG + I + D KV + +I++ + GLL A +L P
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKV------CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 490 ---------------------------VEPTKNMWVALLTACRMHGNLVLGKFAAEKL-- 520
+ P + + ALL C G L G+ E++
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 521 -YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
+G+EP + YV ++ + +GKL EA + +L++
Sbjct: 438 EFGIEP-QTEHYVYMVKLMGMAGKLEEAFEFVMSLQK 473
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 81 VMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIR 140
+ +P S I + C +KEA+ LF L + G D ++ C L
Sbjct: 268 ISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDC--VLVAIVLGSCAELSDSV 325
Query: 141 GVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLV 200
K V Y+I G E D+ + + ++ M+ +CGL+ A LFA +PE++ VS+ +LI GL
Sbjct: 326 SGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLG 385
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQI 246
G + AFE+F + E TF+ ++ GL+ G++I
Sbjct: 386 LHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 10/176 (5%)
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
I+ ++ + + ++ H+ + + D T L FY+ + AR +FD +
Sbjct: 10 IIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPER 69
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE----RG 445
+V WN++I Y Q + +F Q+LR P++ T+ AC G SE +G
Sbjct: 70 SVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY-----ACLARGFSESFDTKG 124
Query: 446 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALL 501
+ ++ + + + +++ + GL+ EA L S P +P +W ++
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMI 179
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/495 (31%), Positives = 252/495 (50%), Gaps = 49/495 (9%)
Query: 116 GDGADVGGSTYDALVNVCV--GLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGL 173
GD A V GS +++ V G I G ++ + +GFE ++Y+ ++ M+ RCG
Sbjct: 121 GD-ARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE 179
Query: 174 MLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM----WEEFNDGRSRTFAT 229
+ A ++F +P + V++ ISGL+++G F M EE ND TF
Sbjct: 180 WVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPND---VTFVN 236
Query: 230 MVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE-K 288
+ A A L ++ GRQ+H +K+ ++ V ALIDMYSKC + A VF ++ + +
Sbjct: 237 AITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR 296
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT--------------------- 327
+ + WNS+ISG + G E A+ ++ ++ G K D T
Sbjct: 297 NLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFF 356
Query: 328 ---ISIV-----------IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
+S+V + C+ + +L++ K+ H +++ DI T L+D Y K
Sbjct: 357 ERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKC 416
Query: 374 GRMEDARHVFDRM--LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
G AR +FDR K+ + WN +I+GYG HG+ E AIE+FE + E+V P+ TF A
Sbjct: 417 GLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTA 476
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
VLSACS+ G E+G +IF M ++ KP H CMI+LLGR G L EA +I
Sbjct: 477 VLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEP 536
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
+ +LL +CR H + VLG+ AA KL +EP + +V+L ++Y++ + + +
Sbjct: 537 SSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIR 595
Query: 552 KTLKRKGLTMLPTCS 566
+ + +K L LP S
Sbjct: 596 QVIDQKQLVKLPGLS 610
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 168/330 (50%), Gaps = 5/330 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ L+ C L + + + ++ GF D++ ++ M+++ + DA K+ +M
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
PER S +SGL+++G +AF F + G T+ G G IE G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMF---GDARVSGSGMNSVTVASVLGGCGDIEGGM 149
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q+H A+K G + +V +L+ MYS+CG A +F+++P KS V +N+ ISG G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 305 YSEEALSIYLEMRD-SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
S++ MR S + + T I CA L +L++ +Q H +++ F + +
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 364 TGLVDFYSKWGRMEDARHVFDRML-RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
T L+D YSK + A VF + +N+ISWN++I+G +GQ E A+E+FE++ E +
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
P+ T+ +++S S G ++ F M
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 164/327 (50%), Gaps = 12/327 (3%)
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
TF ++++ A LG + GR +H+ +K G D F A AL+ MY K + DA V D+M
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
PE+ N+ +SG G+ +A ++ + R SG+ ++ T++ V+ C +E
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGM 149
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
Q H ++ GF ++ T LV YS+ G A +F+++ K+V+++NA I+G +G
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 406 QGEQAIEMFEQMLR-ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMH 464
+F M + PN VTF+ ++AC+ S L+ + + + + + M
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA-SLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 465 YACMIELLGREGLLDEAFALIRSAPVEPTKNM--WVALLTACRMHGNLVLGKFAAEKL-- 520
+I++ + A+ I ++ T+N+ W ++++ ++G EKL
Sbjct: 269 GTALIDMYSKCRCWKSAY--IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEA 547
G++P +++ L++ +S GK++EA
Sbjct: 327 EGLKPDS-ATWNSLISGFSQLGKVIEA 352
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 67 GHVERKVPVLE--DAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
G E V + E D+ +KP ++ S I + + EA FE +
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFE--RMLSVVMVPSLK 369
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA-- 182
+L++ C + +++ K + G++I E D++++ ++ M+++CGL AR++F
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRF 429
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV 242
+ +D V W +ISG G A E F + EE + TF ++ A + G +E
Sbjct: 430 EPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 243 GRQIHSCALKR-GVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
G QI + G + +ID+ + G + +A+ V DQM
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
++FT +++ CA+L + + HA +V+ GF D+ T LV Y K ++ DA V
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVL 89
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
D M + + S NA ++G +G A MF N VT +VL C
Sbjct: 90 DEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 237/451 (52%), Gaps = 7/451 (1%)
Query: 128 ALVNVCVGLRSIRGVKRVFG--YMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
+L+ +C + S V R+F ++ + + + ++ M+++ A +F M
Sbjct: 153 SLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQME 212
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL-IEVGR 244
++ VSW +ISG V + NY + F M E T +++ A L + +
Sbjct: 213 VKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVK 272
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+IH + + G D + A + MY +CG++ ++ +F+ + V W+S+ISGYA G
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
E +++ +MR G + + T+ ++ C L A H+ +++ GF S I+
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+D Y+K G + AR VF + K+++SW+++I YG HG G +A+E+F+ M++
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM-HYACMIELLGREGLLDEAFA 483
+ + FLA+LSAC+++GL E IF + H P + HYAC I LLGR G +D+AF
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIFTQAGKYH--MPVTLEHYACYINLLGRFGKIDDAFE 510
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNL-VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+ + P++P+ +W +LL+AC HG L V GK A +L EP ++YV+L +++ SG
Sbjct: 511 VTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
Query: 543 KLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
A V + ++R+ L S IE + Q
Sbjct: 571 NYHAAEEVRRVMQRRKLNKCYGFSKIEPELQ 601
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 26/386 (6%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
G + D + N ++ M+ + RK+F +M RD VS+ ++I+ G EA +
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLG-LIEVGRQIHSCAL-KRGVGEDSFVACALIDMYS 270
M+ +S A+++ +G +V R H+ L + E ++ AL+DMY
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
K A VFDQM K+ V W ++ISG E + ++ M+ + ++ T+
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 331 VIRICARL---ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
V+ C L +SL K+ H RHG +D + Y + G + +R +F+
Sbjct: 257 VLPACVELNYGSSL--VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK 314
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
++V+ W+++I+GY G + + + QM +E + N VT LA++SAC+ S L
Sbjct: 315 VRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS---- 370
Query: 448 IFYSMSRDHKVKPRAMHYA----CMIELLGREGLLDEAFALIRSAPVEPTKN---MWVAL 500
F S +K M + +I++ + G L A R E T+ W ++
Sbjct: 371 -FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAA----REVFYELTEKDLVSWSSM 425
Query: 501 LTACRMHGNLVLGKFAAEKLYGMEPG 526
+ A +HG+ G A E GM G
Sbjct: 426 INAYGLHGH---GSEALEIFKGMIKG 448
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 176/408 (43%), Gaps = 47/408 (11%)
Query: 196 ISGLVDSGNYAEAFEQF-LCMWEEFNDGRSRTFATMVRASA-GLGLIEVGRQIHSCALKR 253
+ GLV Y EA + L + +G + ++++A A +G Q+H LK
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 254 GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIY 313
G D+ V+ +LI MY+K + VFD+M + TV + SII+ G EA+ +
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEH-AKQAHA-ALVRHGFGSDIVANTGLVDFYS 371
EM G ++ ++ +C R+ S A+ HA LV ++ +T LVD Y
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
K+ A HVFD+M KN +SW A+I+G + E +++F M RE + PN VT L+
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 432 VLSAC-----------SYSGLS--------ERGWEIFYSM---------SR----DHKVK 459
VL AC G S ER F +M SR KV+
Sbjct: 257 VLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 460 PRAMHYACMIELLGREGLLDEAFALI---RSAPVEPTKNMWVALLTACRMHGNLVLGKFA 516
M ++ MI G E L+ R +E +A+++AC N L FA
Sbjct: 317 DVVM-WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACT---NSTLLSFA 372
Query: 517 AEKLYGMEPGKLSSYVM----LLNMYSSSGKLMEAAGVLKTLKRKGLT 560
+ + S+++ L++MY+ G L A V L K L
Sbjct: 373 STVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLV 420
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 228/464 (49%), Gaps = 68/464 (14%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
+++C L + RVF + I N P++ + N ++ + G L++ F+ M R
Sbjct: 42 FISICGSLSNSDYANRVFSH-IQN---PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSR- 96
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
G +A+ + T+A ++++ + L + G+ +H
Sbjct: 97 --------------GIWADEY----------------TYAPLLKSCSSLSDLRFGKCVHG 126
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD------------------------- 283
++ G + ++++Y+ G + DAQ VFD
Sbjct: 127 ELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVER 186
Query: 284 ------QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
QM E+S V WNS+IS + G EAL ++ EM D G D+ T+ V+ I A
Sbjct: 187 GLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISAS 246
Query: 338 LASLEHAKQAHAALVRHGFGSD-IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
L L+ K H+ G D I LVDFY K G +E A +F +M R+NV+SWN
Sbjct: 247 LGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNT 306
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRE-RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
LI+G +G+GE I++F+ M+ E +V PN TFL VL+ CSY+G ERG E+F M
Sbjct: 307 LISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMER 366
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF 515
K++ R HY M++L+ R G + EAF +++ PV MW +LL+ACR HG++ L +
Sbjct: 367 FKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEV 426
Query: 516 AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
AA +L +EPG +YV+L N+Y+ G+ + V +K+ L
Sbjct: 427 AAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRL 470
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 37/363 (10%)
Query: 79 AHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRS 138
+H+ P+ + I+ +L E++ F ++ G AD TY L+ C L
Sbjct: 60 SHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD--EYTYAPLLKSCSSLSD 117
Query: 139 IRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISG 198
+R K V G +I GF + V+ ++ G M DA+K+F +M ER+ V W +I G
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRG 177
Query: 199 LVDSGNYA-------------------------------EAFEQFLCMWEEFNDGRSRTF 227
DSG+ EA E F M ++ D T
Sbjct: 178 FCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATV 237
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF-VACALIDMYSKCGSIEDAQCVFDQMP 286
T++ SA LG+++ G+ IHS A G+ +D V AL+D Y K G +E A +F +M
Sbjct: 238 VTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ 297
Query: 287 EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG-AKIDQFTISIVIRICARLASLEHAK 345
++ V WN++ISG A+ G E + ++ M + G ++ T V+ C+ +E +
Sbjct: 298 RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 346 QAHAALV-RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGN 403
+ ++ R + +VD S+ GR+ +A M + N W +L++ +
Sbjct: 358 ELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRS 417
Query: 404 HGQ 406
HG
Sbjct: 418 HGD 420
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 8/218 (3%)
Query: 265 LIDMYSKCGSIED---AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
L S CGS+ + A VF + + + +N++I Y+L G E+LS + M+ G
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
D++T + +++ C+ L+ L K H L+R GF G+V+ Y+ GRM DA+
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
VFD M +NV+ WN +I G+ + G E+ + +F+QM ER I + + ++ LS C G
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQM-SERSIVSWNSMISSLSKC---GR 214
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
E+F M D P ++ + G+LD
Sbjct: 215 DREALELFCEMI-DQGFDPDEATVVTVLPISASLGVLD 251
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 238/452 (52%), Gaps = 10/452 (2%)
Query: 165 LHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
+++ R G + +A K F+DM E + ++++ L+SG D + +EA L +
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYA-CK 101
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED--SFVACALIDMYSKCGSIEDA 278
G R + +A +G+ + L ED S +ID Y + G +++A
Sbjct: 102 LGLDRNHVMV--GTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNA 159
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+FD+MPE+ + W ++I+G+ +GY EEAL + EM+ SG K D I + C L
Sbjct: 160 AKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNL 219
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALI 398
+L H ++ F +++ + L+D Y + G +E AR VF M ++ V+SWN++I
Sbjct: 220 GALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVI 279
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 458
G+ +G +++ F +M + P+ VTF L+ACS+ GL E G F M D+++
Sbjct: 280 VGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRI 339
Query: 459 KPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG-NLVLGKFAA 517
PR HY C+++L R G L++A L++S P++P + + +LL AC HG N+VL +
Sbjct: 340 SPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLM 399
Query: 518 EKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAF 577
+ L + S+YV+L NMY++ GK A+ + + +K GL P S IE+ + F
Sbjct: 400 KHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVF 459
Query: 578 LCGDKSHTQTKEIYQKVDNLMDEISRHGYIEE 609
+ GD +H +T I + ++ + ++ G + E
Sbjct: 460 MAGDNAHVETTYIREVLELISSDLRLQGCVVE 491
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 24/335 (7%)
Query: 134 VGLRSIRG----VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
+G+ S RG + VF YM + + N ++ ++R G + +A K+F MPERD
Sbjct: 116 IGMYSKRGRFKKARLVFDYM----EDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL 171
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
+SW +I+G V G EA F M + A LG + G +H
Sbjct: 172 ISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY 231
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
L + + V+ +LID+Y +CG +E A+ VF M +++ V WNS+I G+A G + E+
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG-LVD 368
L + +M++ G K D T + + C+ + +E + + S + + G LVD
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVD 351
Query: 369 FYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHV 427
YS+ GR+EDA + M ++ N + +L+A NHG I + E++++ H+
Sbjct: 352 LYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN---IVLAERLMK------HL 402
Query: 428 TFLAVLSACSYSGLS-----ERGWEIFYSMSRDHK 457
T L V S +Y LS + WE M R K
Sbjct: 403 TDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 437
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 11/218 (5%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+EA+ F +++ G D A +N C L ++ V Y++S F+ ++ + N
Sbjct: 188 EEALLWFREMQISGVKPDY--VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ ++ RCG + AR++F +M +R VSW ++I G +GN E+ F M E+
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 223 RSRTFATMVRASAGLGLIEVGR---QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
+ TF + A + +GL+E G QI C + + + C L+D+YS+ G +EDA
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHY-GC-LVDLYSRAGRLEDAL 363
Query: 280 CVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
+ MP K N ++ G L S +I L R
Sbjct: 364 KLVQSMPMKP----NEVVIGSLLAACSNHGNNIVLAER 397
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 216/436 (49%), Gaps = 45/436 (10%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
E+E G T+ ++ C L G ++ +GF + Y+ N ++ H CG
Sbjct: 102 EMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCG 161
Query: 173 LMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
+ A +LF D + V+W ++ SG G EA R F M
Sbjct: 162 DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM---------------RLFDEM-- 204
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG 292
K V + + L KC ++ A+ +FD+ EK V
Sbjct: 205 -----------------PYKDQVAWNVMITGCL-----KCKEMDSARELFDRFTEKDVVT 242
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
WN++ISGY GY +EAL I+ EMRD+G D TI ++ CA L LE K+ H ++
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 353 RHG-FGSDIVANT----GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG 407
S I T L+D Y+K G ++ A VF + +++ +WN LI G H
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 361
Query: 408 EQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYAC 467
E +IEMFE+M R +V PN VTF+ V+ ACS+SG + G + F M + ++P HY C
Sbjct: 362 EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGC 421
Query: 468 MIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGK 527
M+++LGR G L+EAF + S +EP +W LL AC+++GN+ LGK+A EKL M +
Sbjct: 422 MVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE 481
Query: 528 LSSYVMLLNMYSSSGK 543
YV+L N+Y+S+G+
Sbjct: 482 SGDYVLLSNIYASTGQ 497
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 195/461 (42%), Gaps = 82/461 (17%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRC--GLMLDARKLFADMPERDAVSWMT 194
++IR +K++ M+ NG +L ++ +++ G + A KLF ++P+ D
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
++ G S + + M + TF +++A + L G H ++ G
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 255 VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYL 314
+ +V ALI ++ CG + A +FD + V W+S+ SGYA RG +EA+ ++
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
EM DQ +++I C K
Sbjct: 203 EM----PYKDQVAWNVMITGCL-----------------------------------KCK 223
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
M+ AR +FDR K+V++WNA+I+GY N G ++A+ +F++M P+ VT L++LS
Sbjct: 224 EMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLS 283
Query: 435 ACSYSGLSERGWE----IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA-- 488
AC+ G E G I + S + + +I++ + G +D A + R
Sbjct: 284 ACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
Query: 489 -------------------------------PVEPTKNMWVALLTACRMHGNLVLGK--F 515
V P + ++ ++ AC G + G+ F
Sbjct: 344 RDLSTWNTLIVGLALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYF 403
Query: 516 AAEK-LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
+ + +Y +EP + Y +++M +G+L EA ++++K
Sbjct: 404 SLMRDMYNIEPN-IKHYGCMVDMLGRAGQLEEAFMFVESMK 443
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 158/338 (46%), Gaps = 24/338 (7%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALI--DMYSKCGSIEDAQCVFDQMPEKSTVGWNSII 297
I +QIH+ + G+ + V LI S G+++ A +FD++P+ N ++
Sbjct: 25 IRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVL 84
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
G A E+ +S+Y EM G D++T + V++ C++L + H +VRHGF
Sbjct: 85 RGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+ L+ F++ G + A +FD + + ++W+++ +GY G+ ++A+ +F++M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 418 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 477
+ + V + +++ C + E+F D + + + MI G
Sbjct: 205 PYK----DQVAWNVMITGCLKCKEMDSARELF-----DRFTEKDVVTWNAMISGYVNCGY 255
Query: 478 LDEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYV-- 532
EA F +R A P ++LL+AC + G+L GK +Y +E +SS +
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL--HIYILETASVSSSIYV 313
Query: 533 ------MLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT 564
L++MY+ G + A V + +K + L+ T
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNT 351
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 243/480 (50%), Gaps = 25/480 (5%)
Query: 133 CVGLRSIRGVKRVF--------GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
C ++ I+ +F Y IS L++ N H H A +F +
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHY-------ASSIFDSI 73
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFAT---MVRASAGLGLIE 241
++ + T+I S FL M +E + + ++ T ++ A
Sbjct: 74 EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFS 133
Query: 242 VGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
VG+QIH +K GV DS V ++ +Y + + DA+ VFD++P+ V W+ +++GY
Sbjct: 134 VGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGY 193
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF-GSD 359
G E L ++ EM G + D+F+++ + CA++ +L K H + + + SD
Sbjct: 194 VRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD 253
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+ T LVD Y+K G +E A VF ++ R+NV SW ALI GY +G ++A+ E++ R
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 420 ERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
E I P+ V L VL+AC++ G E G + +M +++ P+ HY+C+++L+ R G L
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL----SSYVML 534
D+A LI P++P ++W ALL CR H N+ LG+ A + L +E G + ++ V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 535 LNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKV 594
N+Y S + EA+ V ++++G+ P S +EV F+ GD SH +I+ +
Sbjct: 434 SNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 216/390 (55%), Gaps = 2/390 (0%)
Query: 180 LFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW-EEFNDGRSRTFATMVRASAGLG 238
+F MP R+ SW +I SG +++ + FL MW E T ++RA +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
+ G IH LK G FV+ AL+ MY G + A+ +FD MP + +V + ++
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
GY +G + L+++ EM SG +D + ++ C +L +L+H K H +R
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+ + D Y K ++ A VF M R++VISW++LI GYG G + ++F++ML
Sbjct: 269 GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEML 328
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
+E + PN VTFL VLSAC++ GL E+ W +++ + +++ + P HYA + + + R GLL
Sbjct: 329 KEGIEPNAVTFLGVLSACAHGGLVEKSW-LYFRLMQEYNIVPELKHYASVADCMSRAGLL 387
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMY 538
+EA + PV+P + + A+L+ C+++GN+ +G+ A +L ++P K S YV L +Y
Sbjct: 388 EEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLY 447
Query: 539 SSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
S++G+ EA + + +K K ++ +P CS I
Sbjct: 448 SAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 5/315 (1%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T ++ C R + + + GF L++ + ++ M+V G +L ARKLF DM
Sbjct: 136 TLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM 195
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RD+V + + G V G F M S +++ A LG ++ G+
Sbjct: 196 PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGK 255
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+H ++R + A+ DMY KC ++ A VF M + + W+S+I GY L G
Sbjct: 256 SVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+ ++ EM G + + T V+ CA +E + + + ++
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYA 375
Query: 365 GLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG---YGNHGQGEQAIEMFEQMLRE 420
+ D S+ G +E+A + M ++ + A+++G YGN GE+ Q L+
Sbjct: 376 SVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQ-LKP 434
Query: 421 RVIPNHVTFLAVLSA 435
R +VT + SA
Sbjct: 435 RKASYYVTLAGLYSA 449
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 358 SDIVANTGLVDFYSKWGRM-EDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
S++V ++ LV YSK + + VF M +N+ SWN +I + G ++I++F +
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 417 MLRERVI-PNHVTFLAVLSACSYSGLSERG 445
M RE + P+ T +L ACS S ++ G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSG 153
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 228 bits (582), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 240/460 (52%), Gaps = 12/460 (2%)
Query: 95 KLALCN-------RYKEAMDLFEI-LELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVF 146
LA+CN + E+ LFE+ L +E +G G TY ++ C R + K++
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 147 GYMISNGFE-PDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNY 205
++ +G+ ++++ N ++ + CG + + + F +PE+D +SW +++S D G+
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSV 296
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF-VACA 264
++ + F M R F + + + I+ G+QIH LK G S V A
Sbjct: 297 LDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSA 356
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKID 324
LIDMY KC IE++ ++ +P + NS+++ G +++ + ++ M D G ID
Sbjct: 357 LIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGID 416
Query: 325 QFTISIVIRICARL--ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
+ T+S V++ + SL H ++ G+ +D+ + L+D Y+K G+ E +R V
Sbjct: 417 EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKV 476
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
FD + N+ ++I GY +G G ++M +M R +IP+ VT L+VLS CS+SGL
Sbjct: 477 FDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLV 536
Query: 443 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT 502
E G IF S+ + + P YACM++LLGR GL+++A L+ A + W +LL
Sbjct: 537 EEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQ 596
Query: 503 ACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSG 542
+CR+H N +G+ AAE L +EP + Y+ + Y G
Sbjct: 597 SCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 166/343 (48%), Gaps = 3/343 (0%)
Query: 100 NRYKEAMDLFEIL-ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDL 158
+RY ++ E+ E+ G ST+ ++++VC R +V +IS GF ++
Sbjct: 88 SRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNM 147
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEE 218
++ + ++ ++ L+ A KLF +M +R+ L+ +G FE +L M E
Sbjct: 148 FVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE 207
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIED 277
T+ M+R + L+ G+Q+HS +K G + FVA L+D YS CG +
Sbjct: 208 GVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSG 267
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ F+ +PEK + WNSI+S A G ++L ++ +M+ G + + C+R
Sbjct: 268 SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSR 327
Query: 338 LASLEHAKQAHAALVRHGFG-SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
+ ++ KQ H +++ GF S + + L+D Y K +E++ ++ + N+ N+
Sbjct: 328 NSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNS 387
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS 439
L+ + G + IEMF M+ E + VT VL A S S
Sbjct: 388 LMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLS 430
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 160/334 (47%), Gaps = 3/334 (0%)
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
+Y NR + ++ G +L A + F +M RD V++ LISG G A E + M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+ TF +++ + G Q+H + G G + FV AL+ +Y+ ++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
A +FD+M +++ N ++ + G S+ +YL M G + T +IR C+
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 338 LASLEHAKQAHAALVRHGFG-SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
+ KQ H+ +V+ G+ S+I LVD+YS G + + F+ + K+VISWN+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF-YSMSRD 455
+++ ++G ++++F +M P+ F++ L+ CS + + G +I Y +
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMG 345
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAP 489
V + A +I++ G+ ++ + L +S P
Sbjct: 346 FDVSSLHVQSA-LIDMYGKCNGIENSALLYQSLP 378
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
ID K G++ A FD+M + V +N +ISG + G S A+ +Y EM G +
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T V+ +C+ Q H ++ GFG ++ + LV Y+ ++ A +FD
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDE 172
Query: 386 MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG 445
ML +N+ N L+ + G+ ++ E++ +M E V N +T+ ++ CS+ L G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 446 WEIF-------YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM-- 496
++ +++S +Y+ +L G +RS P K++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGS----------MRSFNAVPEKDVIS 282
Query: 497 WVALLTACRMHGNLV--LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL 544
W ++++ C +G+++ L F+ + +G P + ++ LN S + +
Sbjct: 283 WNSIVSVCADYGSVLDSLDLFSKMQFWGKRP-SIRPFMSFLNFCSRNSDI 331
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 198/384 (51%), Gaps = 30/384 (7%)
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
+E+ D GA D+ ++ CA L SLEH+K+ H ++ F D N ++ + +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 374 GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
+ DA+ VFD M+ K++ SW+ ++ Y ++G G+ A+ +FE+M + + PN TFL V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 434 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT 493
AC+ G E + F SM +H + P+ HY ++ +LG+ G L EA IR P EPT
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPT 404
Query: 494 KNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKT 553
+ W A+ R+HG++ L + E + ++P K V+
Sbjct: 405 ADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK---------------------AVINK 443
Query: 554 LKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEML 613
+ + + K + F + KE+ K + Y+ + +
Sbjct: 444 IPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEAKEMAAKKGVV--------YVPDTRFV 495
Query: 614 LPDVDEE-EQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGR 672
L D+D+E +++ L YHSE L IAYG+I TP L I + RVCG+CHN IK+++ + GR
Sbjct: 496 LHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGR 555
Query: 673 EIVVRDASRFHHFRNGTCSCGDYW 696
++VRD RFHHF++G CSCGDYW
Sbjct: 556 VLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 94 EKLALCNR--YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMIS 151
E + LC R YK+A++L + GA + L C L+S+ K+V + +
Sbjct: 211 EVMRLCQRRLYKDAIELLD------KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQ 264
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
+ F D + N V+ M C + DA+++F M ++D SW ++ D+G +A
Sbjct: 265 SKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVG-RQIHSCALKRGVGEDSFVACALIDMYS 270
F M + TF T+ A A +G IE S + G+ + ++ +
Sbjct: 325 FEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLG 384
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
KCG + +A+ +P + T + + YA R + + L Y+E
Sbjct: 385 KCGHLVEAEQYIRDLPFEPTADFWEAMRNYA-RLHGDIDLEDYME 428
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 2/173 (1%)
Query: 227 FATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP 286
F + + A L +E +++H L+ D + +I M+ +C SI DA+ VFD M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 287 EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQ 346
+K W+ ++ Y+ G ++AL ++ EM G K ++ T V CA + +E A
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 347 AHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDA-RHVFDRMLRKNVISWNAL 397
++ HG G++ K G + +A +++ D W A+
Sbjct: 359 HFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAM 411
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 219/423 (51%), Gaps = 6/423 (1%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
AR L + +W L G S + E+ + M TF +++A A
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
+ GRQI LK G D +V LI +Y C DA+ VFD+M E++ V WNSI
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
++ G + EM D+ T+ +++ C +L K H+ ++
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVREL 243
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
+ T LVD Y+K G +E AR VF+RM+ KNV +W+A+I G +G E+A+++F +
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSK 303
Query: 417 MLRERVI-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
M++E + PN+VTFL VL ACS++GL + G++ F+ M + HK+KP +HY M+++LGR
Sbjct: 304 MMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRA 363
Query: 476 GLLDEAFALIRSAPVEPTKNMWVALLTACRMH---GNLVLGKFAAEKLYGMEPGKLSSYV 532
G L+EA+ I+ P EP +W LL+AC +H + +G+ ++L +EP + + V
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLV 423
Query: 533 MLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQ 592
++ N ++ + EAA V + +K + + S +E+ + F G ++ IY+
Sbjct: 424 IVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYE 483
Query: 593 KVD 595
+D
Sbjct: 484 LLD 486
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 149/296 (50%), Gaps = 7/296 (2%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
E++ G T+ L+ C + +++ ++ +GF+ D+Y+ N ++H++ C
Sbjct: 103 EMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCK 162
Query: 173 LMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATM-V 231
DARK+F +M ER+ VSW ++++ LV++G FE C E TM V
Sbjct: 163 KTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFE---CFCEMIGKRFCPDETTMVV 219
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
SA G + +G+ +HS + R + + + AL+DMY+K G +E A+ VF++M +K+
Sbjct: 220 LLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVW 279
Query: 292 GWNSIISGYALRGYSEEALSIYLE-MRDSGAKIDQFTISIVIRICARLASLEHA-KQAHA 349
W+++I G A G++EEAL ++ + M++S + + T V+ C+ ++ K H
Sbjct: 280 TWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHE 339
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNH 404
H ++ +VD + GR+ +A +M + + W L++ H
Sbjct: 340 MEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 163/371 (43%), Gaps = 49/371 (13%)
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDM--YSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
L+++ QIH +L+ DSF+ L+ + S + A+ + + + WN +
Sbjct: 29 LLQIHGQIHLSSLQ----NDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNML 84
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
GY+ E++ +Y EM+ G K ++ T +++ CA L +Q +++HGF
Sbjct: 85 SRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGF 144
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
D+ L+ Y + DAR VFD M +NV+SWN+++ +G+ E F +
Sbjct: 145 DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE 204
Query: 417 MLRERVIPNHVTFLAVLSACS---------YSGLSERGWEI------------------- 448
M+ +R P+ T + +LSAC +S + R E+
Sbjct: 205 MIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL----IRSAPVEPTKNMWVALLTAC 504
+ + + V ++ MI L + G +EA L ++ + V P ++ +L AC
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 505 RMHGNLVLGKFA----AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG-- 558
H LV + EK++ ++P + Y ++++ +G+L EA +K + +
Sbjct: 325 S-HTGLVDDGYKYFHEMEKIHKIKP-MMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDA 382
Query: 559 ---LTMLPTCS 566
T+L CS
Sbjct: 383 VVWRTLLSACS 393
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 226 bits (575), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/470 (29%), Positives = 241/470 (51%), Gaps = 5/470 (1%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
S I LA +E+ D+F E++ G G L+N + + K G++I
Sbjct: 301 SIIASLARSGDMEESFDMF--WEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 151 SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER-DAVSWMTLISGLVDSGNYAEAF 209
+ F D + N +L M+ + L+ A KLF + E + +W T++ G + +
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
E F + + S + +++ + + +G + +G+ +H +K + V +LID+Y
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
K G + A +F + + + + WN++I+ Y SE+A++++ M K T+
Sbjct: 479 GKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
++ C SLE + H + ++ + L+D Y+K G +E +R +FD +K
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
+ + WN +I+GYG HG E AI +F+QM V P TFLA+LSAC+++GL E+G ++F
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
M + + VKP HY+C+++LL R G L+EA + + S P P +W LL++C HG
Sbjct: 658 LKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 510 LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
+G AE+ +P Y+ML NMYS++GK EA + ++ G+
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGV 766
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 9/345 (2%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG-FEPDLYM 160
Y ++ F + L G D T +V+ C L V G ++ +G F+ + +
Sbjct: 106 YARSLCFFFSMLLSGQSPD--HFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAV 163
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW---- 216
++ + +CG + DA +F +MP+RD V+W +ISG V +G +E +LC
Sbjct: 164 GASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE-SEGGLGYLCKMHSAG 222
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
+ + RT +A + LG ++ GR +H A+K G+ FV ++ YSK G+
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
+A F ++ ++ W SII+ A G EE+ ++ EM++ G D IS +I
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-NVISWN 395
++ + K H ++RH F D L+ Y K+ + A +F R+ + N +WN
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSG 440
++ GYG + IE+F ++ + + + +V+S+CS+ G
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 163/352 (46%), Gaps = 9/352 (2%)
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
V +C S+ +++ +I+ G ++++ ++++ + G + ++F + RD
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDI 90
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
W ++I +G+YA + F M T +V A A L VG +H
Sbjct: 91 FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150
Query: 250 ALKR-GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
LK G ++ V + + YSKCG ++DA VFD+MP++ V W +IISG+ G SE
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210
Query: 309 ALSIYLEMRDSGAKIDQ---FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG 365
L +M +G+ +D+ T+ + C+ L +L+ + H V++G S +
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270
Query: 366 LVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
+ FYSK G +A F + +++ SW ++IA G E++ +MF +M + + P+
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330
Query: 426 HVTFLAVLSACSY-----SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
V +++ G + G+ I + S D V + C ELL
Sbjct: 331 GVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELL 382
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 6/275 (2%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
+E R+ ++ + G+ E+ FVA LI Y+ G + VF + + WNSII
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH-GFGS 358
+ G +L + M SG D FT +V+ CA L H +++H GF
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+ V FYSK G ++DA VFD M ++V++W A+I+G+ +G+ E + +M
Sbjct: 160 NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMH 219
Query: 419 ---RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
+ PN T ACS G + G + + + + + M +
Sbjct: 220 SAGSDVDKPNPRTLECGFQACSNLGALKEG-RCLHGFAVKNGLASSKFVQSSMFSFYSKS 278
Query: 476 GLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
G EA+ R E + W +++ + G++
Sbjct: 279 GNPSEAYLSFRELGDEDMFS-WTSIIASLARSGDM 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 58/108 (53%)
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
I + +C + SLE ++ +A ++ G +I + L+ Y+ +G+ + VF + R+
Sbjct: 29 ISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
++ WN++I + ++G +++ F ML P+H T V+SAC+
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACA 136
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 205/400 (51%), Gaps = 3/400 (0%)
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER-DAVSWMTLISGLVDSGNY 205
G + +GF + N ++H + CG + DARK+F +MP+ DAV++ TL++G +
Sbjct: 149 GIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKK 208
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACAL 265
A A + F M + T + + A + LG + H +K G+ D + AL
Sbjct: 209 ALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITAL 268
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
I MY K G I A+ +FD K V WN +I YA G EE + + +M+ K +
Sbjct: 269 IGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNS 328
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T ++ CA + + L D + T LVD Y+K G +E A +F+R
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNR 388
Query: 386 MLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE--RVIPNHVTFLAVLSACSYSGLSE 443
M K+V SW A+I+GYG HG +A+ +F +M E +V PN +TFL VL+ACS+ GL
Sbjct: 389 MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVM 448
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
G F M + P+ HY C+++LLGR G L+EA+ LIR+ P+ W ALL A
Sbjct: 449 EGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
Query: 504 CRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
CR++GN LG+ +L M + ++L ++ +G
Sbjct: 509 CRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 210/474 (44%), Gaps = 59/474 (12%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDAR---KLFADMP 185
L+N R V R+ GYM+ G + D + ++++L +LD R +F +
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSS----VLDIRYASSIFEHVS 86
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQ 245
+ + T+I G S AF F + + +F T +++ + + +G
Sbjct: 87 NTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-STVGWNSIISGYALRG 304
+H AL+ G + + ALI Y CG I DA+ VFD+MP+ V ++++++GY
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVS 206
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
AL ++ MR S ++ T+ + + L L A+ AH ++ G D+ T
Sbjct: 207 KKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLIT 266
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+ Y K G + AR +FD +RK+V++WN +I Y G E+ + + QM E++ P
Sbjct: 267 ALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKP 326
Query: 425 NHVTFLAVLSACSYS-----------------------------------GLSERGWEIF 449
N TF+ +LS+C+YS GL E+ EIF
Sbjct: 327 NSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIF 386
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR-----SAPVEPTKNMWVALLTAC 504
M +D VK + MI G GL EA L + V P + ++ +L AC
Sbjct: 387 NRM-KDKDVKS----WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNAC 441
Query: 505 RMHGNLVLGKFAAEK----LYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
HG LV+ K Y P K+ Y ++++ +G+L EA +++ L
Sbjct: 442 S-HGGLVMEGIRCFKRMVEAYSFTP-KVEHYGCVVDLLGRAGQLEEAYELIRNL 493
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 15/333 (4%)
Query: 92 QIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMIS 151
Q+ K AL A+DLF I+ +V ST + ++ L + G + I
Sbjct: 204 QVSKKAL------ALDLFRIMRKSEVVVNV--STLLSFLSAISDLGDLSGAESAHVLCIK 255
Query: 152 NGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQ 211
G + DL+++ ++ M+ + G + AR++F +D V+W +I +G E
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
M E S TF ++ + A VGR + + + D+ + AL+DMY+K
Sbjct: 316 LRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAK 375
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI--DQFTIS 329
G +E A +F++M +K W ++ISGY G + EA++++ +M + K+ ++ T
Sbjct: 376 VGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFL 435
Query: 330 IVIRICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-L 387
+V+ C+ + + +V + F + +VD + G++E+A + + +
Sbjct: 436 VVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
Query: 388 RKNVISWNALIAG---YGNHGQGEQAIEMFEQM 417
+ +W AL+A YGN GE + +M
Sbjct: 496 TSDSTAWRALLAACRVYGNADLGESVMMRLAEM 528
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 210/409 (51%), Gaps = 41/409 (10%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N ++ +++ G ++ AR LF M +RD +SW T+I G V +AF F M
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------ 338
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
R HS + ++ Y+ G++E A+
Sbjct: 339 --------------------PNRDAHSWNM-------------MVSGYASVGNVELARHY 365
Query: 282 FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
F++ PEK TV WNSII+ Y +EA+ +++ M G K D T++ ++ L +L
Sbjct: 366 FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNL 425
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG 400
Q H +V+ D+ + L+ YS+ G + ++R +FD M L++ VI+WNA+I G
Sbjct: 426 RLGMQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGG 484
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
Y HG +A+ +F M + P+H+TF++VL+AC+++GL + F SM +K++P
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
+ HY+ ++ + +G +EA +I S P EP K +W ALL ACR++ N+ L AAE +
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAM 604
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+EP + YV+L NMY+ G EA+ V ++ K + SW++
Sbjct: 605 SRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 184/448 (41%), Gaps = 71/448 (15%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
N+ L+ +R G + +AR +F + R+ V+W T+ISG V +A + F M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR--- 100
Query: 222 GRSRTFATMVR---ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
T+ TM+ + G+ +E R++ R DSF +I Y+K I +A
Sbjct: 101 -DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEA 155
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM--RDS-------GAKIDQFTIS 329
+F++MPE++ V W+++I+G+ G + A+ ++ +M +DS I +S
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLS 215
Query: 330 IVIRICARLASLEHAKQ-----------------------------------AHAALVRH 354
+ + SL ++ H R
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
F ++V+ ++ Y K G + AR +FD+M ++ ISWN +I GY + + E A +F
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALF 335
Query: 415 EQMLRERVIPNHV--TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+M PN ++ ++S + G E F H V + +I
Sbjct: 336 SEM------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIAAY 384
Query: 473 GREGLLDEAFALIRSAPVE---PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLS 529
+ EA L +E P + +LL+A NL LG + + +
Sbjct: 385 EKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP 444
Query: 530 SYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
+ L+ MYS G++ME+ + +K K
Sbjct: 445 VHNALITMYSRCGEIMESRRIFDEMKLK 472
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 8/213 (3%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
YKEA+DLF + +EG+ D T +L++ GL ++R ++ ++ PD+ +
Sbjct: 390 YKEAVDLFIRMNIEGEKPD--PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVH 446
Query: 162 NRVLHMHVRCGLMLDARKLFADMP-ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
N ++ M+ RCG ++++R++F +M +R+ ++W +I G GN +EA F M
Sbjct: 447 NALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Query: 221 DGRSRTFATMVRASAGLGLI-EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
TF +++ A A GL+ E Q S + +L+++ S G E+A
Sbjct: 507 YPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAM 566
Query: 280 CVFDQMP-EKSTVGWNSIISGYALRGYSEEALS 311
+ MP E W +++ A R Y+ L+
Sbjct: 567 YIITSMPFEPDKTVWGALLD--ACRIYNNVGLA 597
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 203/381 (53%), Gaps = 2/381 (0%)
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
A W ++ + + +A + +L M + +++A+ + +G+++HS
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
A++ G D F I +Y K G E+A+ VFD+ PE+ WN+II G G + E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF--GSDIVANTGL 366
A+ ++++M+ SG + D FT+ V C L L A Q H +++ SDI+ L
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
+D Y K GRM+ A H+F+ M ++NV+SW+++I GY +G +A+E F QM V PN
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 427 VTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
+TF+ VLSAC + GL E G F M + +++P HY C+++LL R+G L EA ++
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 487 SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLME 546
P++P +W L+ C G++ + ++ A + +EP YV+L N+Y+ G +
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 547 AAGVLKTLKRKGLTMLPTCSW 567
V K +K K + +P S+
Sbjct: 442 VERVRKLMKTKKVAKIPAYSY 462
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF D + + + ++ + G +ARK+F + PER SW +I GL +G EA E F
Sbjct: 147 GFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMF 206
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE--DSFVACALIDMYS 270
+ M + T ++ + GLG + + Q+H C L+ E D + +LIDMY
Sbjct: 207 VDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYG 266
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
KCG ++ A +F++M +++ V W+S+I GYA G + EAL + +MR+ G + ++ T
Sbjct: 267 KCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVG 326
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTG-LVDFYSKWGRMEDARHVFDRM-LR 388
V+ C +E K A + +++ G +VD S+ G++++A+ V + M ++
Sbjct: 327 VLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMK 386
Query: 389 KNVISWNALIAGYGNHGQGEQA 410
NV+ W L+ G G E A
Sbjct: 387 PNVMVWGCLMGGCEKFGDVEMA 408
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 229/447 (51%), Gaps = 13/447 (2%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ ++ VC +R V G ++ GF+ D+ + + + +C + ARK+F +M
Sbjct: 112 TFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEM 171
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
PER+AVSW L+ V SG EA F M E N G GL++ G
Sbjct: 172 PERNAVSWTALVVAYVKSGELEEAKSMFDLMPER-NLGSWNALVD--------GLVKSGD 222
Query: 245 QIHSCALKRGVGEDSFVA-CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+++ L + + ++ ++ID Y+K G + A+ +F++ W+++I GYA
Sbjct: 223 LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR--HGFGSDIV 361
G EA ++ EM K D+F + ++ C+++ E ++ + L + + F S V
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYV 342
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
L+D +K G M+ A +F+ M +++++S+ +++ G HG G +AI +FE+M+ E
Sbjct: 343 V-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
++P+ V F +L C S L E G F M + + + HY+C++ LL R G L EA
Sbjct: 402 IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA 461
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+ LI+S P E + W +LL C +HGN + + A L+ +EP SYV+L N+Y++
Sbjct: 462 YELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAAL 521
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWI 568
+ + A + + G+T + SWI
Sbjct: 522 DRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 166/358 (46%), Gaps = 39/358 (10%)
Query: 245 QIHSCALKRGVGED-SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
QIH+ +++G+ +D + ++ + S S+ + VF+++P T WN +I GY+ +
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 304 GYSEEALSIYLEMRDSG-AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
E +SI + M +G A+ D++T +V+++C+ + H ++R GF D+V
Sbjct: 88 FLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVV 147
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
T VDFY K + AR VF M +N +SW AL+ Y G+ E+A MF+ ++ ER
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFD-LMPER- 205
Query: 423 IPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM------------------- 463
N ++ A++ SG ++F M + + +M
Sbjct: 206 --NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEE 263
Query: 464 -------HYACMIELLGREGLLDEAFALIR---SAPVEPTKNMWVALLTACRMHGNLVLG 513
++ +I + G +EAF + + V+P + + V L++AC G L
Sbjct: 264 ARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELC 323
Query: 514 KFAAEKLYGMEPGKLSSYVM--LLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+ L+ S YV+ L++M + G + AA + + + ++ L + CS +E
Sbjct: 324 EKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL--VSYCSMME 379
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 216/457 (47%), Gaps = 51/457 (11%)
Query: 139 IRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISG 198
I +VF M+ E ++ + +++ ++ ++ AR+ F PERD V W T+ISG
Sbjct: 44 IASANKVFCEMV----EKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISG 99
Query: 199 LVDSGNYAEA---FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
++ GN EA F+Q C
Sbjct: 100 YIEMGNMLEARSLFDQMPC----------------------------------------- 118
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
D +++ Y+ G +E + VFD MPE++ WN +I GYA G E L +
Sbjct: 119 -RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKR 177
Query: 316 MRDSGAKI-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKW 373
M D G+ + + T+++V+ CA+L + + K H G+ D+ L+D Y K
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC 237
Query: 374 GRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
G +E A VF + R+++ISWN +I G HG G +A+ +F +M + P+ VTF+ VL
Sbjct: 238 GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVL 297
Query: 434 SACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPT 493
AC + GL E G F SM D + P H C+++LL R G L +A I PV+
Sbjct: 298 CACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKAD 357
Query: 494 KNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKT 553
+W LL A +++ + +G+ A E+L +EP +++VML N+Y +G+ +AA +
Sbjct: 358 AVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVA 417
Query: 554 LKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEI 590
++ G SWIE F + H +T+E+
Sbjct: 418 MRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEEL 454
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 22/285 (7%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEP-DLYMMNRVLHMHVRCGLMLDARKLFA 182
+T +++ C L + K V Y + G+ D+ + N ++ M+ +CG + A ++F
Sbjct: 189 ATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK 248
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEV 242
+ RD +SW T+I+GL G+ EA F M TF ++ A +GL+E
Sbjct: 249 GIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVED 308
Query: 243 GRQIHSCALKRGVGEDSFVACA-LIDMYSKCGSIEDAQCVFDQMPEKS-TVGWNSIISG- 299
G + C ++D+ S+ G + A ++MP K+ V W +++
Sbjct: 309 GLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGAS 368
Query: 300 --YALRGYSEEALS--IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
Y E AL I LE R+ ++ I + A + A+ G
Sbjct: 369 KVYKKVDIGEVALEELIKLEPRNPA------NFVMLSNIYGDAGRFDDAARLKVAMRDTG 422
Query: 356 FGSD-----IVANTGLVDFYS---KWGRMEDARHVFDRMLRKNVI 392
F + I + GLV FYS K R E+ + + + N++
Sbjct: 423 FKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELKSFNIL 467
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 237/466 (50%), Gaps = 17/466 (3%)
Query: 148 YMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAE 207
Y IS L++ N H H A +F + ++ + T+I S
Sbjct: 44 YAISKLLTAFLHLPNLNKHFHY-------ASSIFDSIEIPNSFVYDTMIRICSRSSQPHL 96
Query: 208 AFEQFLCMWEEFNDGRSRTFAT---MVRASAGLGLIEVGRQIHSCALKRGVG-EDSFVAC 263
FL M +E + + ++ T ++ A VG+QIH +K GV D V
Sbjct: 97 GLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQT 156
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
++ +Y + + DA+ VFD++P+ V W+ +++GY G E L ++ EM G +
Sbjct: 157 GVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEP 216
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGF-GSDIVANTGLVDFYSKWGRMEDARHV 382
D+F+++ + CA++ +L K H + + + SD+ T LVD Y+K G +E A V
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACSYSGL 441
F+++ R+NV SW ALI GY +G ++A +++ RE I P+ V L VL+AC++ G
Sbjct: 277 FEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALL 501
E G + +M + + P+ HY+C+++L+ R G LD+A LI P++P ++W ALL
Sbjct: 337 LEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALL 396
Query: 502 TACRMHGNLVLGKFAAEKLYGMEPGKL----SSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
CR H N+ LG+ A + L +E G + ++ V L N+Y S + EA V ++++
Sbjct: 397 NGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQR 456
Query: 558 GLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISR 603
G+ P S +EV F+ GD SH +I+ + L + S+
Sbjct: 457 GIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQ 502
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 192/340 (56%), Gaps = 4/340 (1%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAK 322
A++ Y++ G I +A +F+ MPE+ WN+I++ G EA+S++ M + +
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
++ T+ V+ CA+ +L+ AK HA R SD+ + LVD Y K G +E+A V
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSV 317
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR---ERVIPNHVTFLAVLSACSYS 439
F +K++ +WN++I + HG+ E+AI +FE+M++ + P+H+TF+ +L+AC++
Sbjct: 318 FKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHG 377
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVA 499
GL +G F M+ ++PR HY C+I+LLGR G DEA ++ + ++ + +W +
Sbjct: 378 GLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGS 437
Query: 500 LLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
LL AC++HG+L L + A + L + P M+ N+Y G EA K +K +
Sbjct: 438 LLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNA 497
Query: 560 TMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMD 599
P S IE+ + + F DKSH +T+EIY +D+L+
Sbjct: 498 YKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLIS 537
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 8/250 (3%)
Query: 168 HVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DGRSRT 226
+ R G + +A LF DMPERD SW +++ +G + EA F M E + T
Sbjct: 203 YARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVT 262
Query: 227 FATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP 286
++ A A G +++ + IH+ A +R + D FV+ +L+D+Y KCG++E+A VF
Sbjct: 263 VVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMAS 322
Query: 287 EKSTVGWNSIISGYALRGYSEEALSIYLEMRD---SGAKIDQFTISIVIRICARLASLEH 343
+KS WNS+I+ +AL G SEEA++++ EM + K D T ++ C L
Sbjct: 323 KKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH-GGLVS 381
Query: 344 AKQAHAALVRHGFGSDI-VANTG-LVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG 400
+ + L+ + FG + + + G L+D + GR ++A V M ++ + W +L+
Sbjct: 382 KGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNA 441
Query: 401 YGNHGQGEQA 410
HG + A
Sbjct: 442 CKIHGHLDLA 451
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYS-KCGSIEDAQCVFDQMPEKSTVGWNSIISGYA- 301
+Q+ S + G+ F+ L+ + + ++ A+ +FD+ +T + ++++ Y+
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 302 -LRGYSEEALSIY-LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
L ++ A S + L + S + + F +V++ L+S H L + GF
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLY 160
Query: 360 IVANTGLVDFY-SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
+V T L+ Y S + AR +FD M +NV+SW A+++GY G A+ +FE M
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM- 219
Query: 419 RERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLL 478
ER +P ++ A+L+AC+ +GL +F M + ++P + C++ + G L
Sbjct: 220 PERDVP---SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 479 D-----EAFALIRSAPVEP-TKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGK-LSSY 531
AFA R + N V L C GNL A ++ M K L+++
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC---GNLE----EASSVFKMASKKSLTAW 329
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
++N ++ G+ EA V + + + +
Sbjct: 330 NSMINCFALHGRSEEAIAVFEEMMKLNIN 358
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 234/452 (51%), Gaps = 16/452 (3%)
Query: 130 VNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
+N+ +S++ +K++ +I+ G Y ++++LH+ L A + +P
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSV 71
Query: 190 VSWMTLISGLVDSGNYAEA------FEQFLCMWEEFNDGRSRTFATMVRASA-GLGLIEV 242
+ TLIS +V + N + ++Q L F T+ ++ +AS
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 243 GRQIHSCALK--RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
GR +H+ LK V D FV AL+ Y+ CG + +A+ +F+++ E WN++++ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 301 ALR---GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
A EE L +++ M+ + ++ ++ +I+ CA L AH ++++
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+ T L+D YSK G + AR VFD M +++V +NA+I G HG G++ IE+++ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 418 LRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGL 477
+ + ++P+ TF+ +SACS+SGL + G +IF SM + ++P+ HY C+++LLGR G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 478 LDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNM 537
L+EA I+ PV+P +W + L + + HG+ G+ A + L G+E +YV+L N+
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 538 YSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
Y+ + + + +K + P S +
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 227/449 (50%), Gaps = 35/449 (7%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
A K + + + W +I G +S N ++ ++ M T+ ++++S+
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 120
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALI------------------------------ 266
L ++G +H +K G+ D F+ LI
Sbjct: 121 LSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSI 180
Query: 267 -DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKID 324
D Y+K G + A+ VFD+M E+ V W+S+I GY RG +AL I+ +M R +K +
Sbjct: 181 LDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 325 QFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD 384
+ T+ VI CA L +L K H ++ ++ T L+D Y+K G + DA VF
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 385 RMLRK--NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
R K + + WNA+I G +HG +++++F +M ++ P+ +TFL +L+ACS+ GL
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 443 ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLT 502
+ W F S+ ++ +P++ HYACM+++L R GL+ +A I P++PT +M ALL
Sbjct: 361 KEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 419
Query: 503 ACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTML 562
C HGNL L + +KL ++P YV L N+Y+ + + A + + +++KG+ +
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 563 PTCSWIEVKKQPYAFLCGDKSHTQTKEIY 591
S +++ + F+ DK+H + +IY
Sbjct: 480 AGHSILDLDGTRHRFIAHDKTHFHSDKIY 508
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 136/288 (47%), Gaps = 8/288 (2%)
Query: 127 DALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE 186
+ L+++ R +++F M +L N +L + + G ++ AR +F +M E
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMP----HKNLVTWNSILDAYAKSGDVVSARLVFDEMSE 202
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWE-EFNDGRSRTFATMVRASAGLGLIEVGRQ 245
RD V+W ++I G V G Y +A E F M + T +++ A A LG + G+
Sbjct: 203 RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKT 262
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKST--VGWNSIISGYALR 303
+H L + + +LIDMY+KCGSI DA VF + K T + WN+II G A
Sbjct: 263 VHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G+ E+L ++ +MR+S D+ T ++ C+ ++ A +L G
Sbjct: 323 GFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHY 382
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVIS-WNALIAGYGNHGQGEQA 410
+VD S+ G ++DA M K S AL+ G NHG E A
Sbjct: 383 ACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 3/191 (1%)
Query: 102 YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMM 161
Y +A+++F+ + G + T +++ C L ++ K V Y++ + +
Sbjct: 221 YNKALEIFDQMMRMG-SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 162 NRVLHMHVRCGLMLDARKLF--ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEF 219
++ M+ +CG + DA +F A + E DA+ W +I GL G E+ + F M E
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESK 339
Query: 220 NDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQ 279
D TF ++ A + GL++ + G S ++D+ S+ G ++DA
Sbjct: 340 IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAH 399
Query: 280 CVFDQMPEKST 290
+MP K T
Sbjct: 400 DFISEMPIKPT 410
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 251/535 (46%), Gaps = 72/535 (13%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I+ A N++ EAM+LF E+ G + T +++ C L I + + I
Sbjct: 145 IKGYAQNNQWSEAMELFR--EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKL 202
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
E +++ +LHM+ C + DARKLF +MPER+ V+W +++G +G +A E F
Sbjct: 203 KLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELF 262
Query: 213 -------LCMWEEFNDGRSRT---------FATMVR---------------ASAGLGLIE 241
+ W DG R + M+R ASA
Sbjct: 263 DQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSS 322
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYS------------------------------- 270
G Q+H +KRG F+ +I Y+
Sbjct: 323 KGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFV 382
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQFTIS 329
K G +E A+ VFDQ +K WN++ISGYA + AL ++ EM S K D T+
Sbjct: 383 KNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMV 442
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
V + L SLE K+AH L + ++D Y+K G +E A ++F + K
Sbjct: 443 SVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT--K 500
Query: 390 NVIS-----WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
N+ S WNA+I G HG + A++++ + + PN +TF+ VLSAC ++GL E
Sbjct: 501 NISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVEL 560
Query: 445 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTAC 504
G F SM DH ++P HY CM++LLG+ G L+EA +I+ PV+ +W LL+A
Sbjct: 561 GKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSAS 620
Query: 505 RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
R HGN+ + + AA +L ++P VML N+Y+ +G+ + A V + ++ + +
Sbjct: 621 RTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 137/585 (23%), Positives = 236/585 (40%), Gaps = 137/585 (23%)
Query: 112 LELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRC 171
+ G+ +D + AL C + +++ ++ +G + + Y+ N VL+M+ +C
Sbjct: 31 FDFSGESSDTERALVSAL-GSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKC 89
Query: 172 GLMLDARKLFAD-------------------------------MPERDAVSWMTLISGLV 200
L+ DA +F D MPER VS+ TLI G
Sbjct: 90 RLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYA 149
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+ ++EA E F M T AT++ A + LG I R + S A+K + F
Sbjct: 150 QNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVF 209
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSE------------- 307
V+ L+ MY C ++DA+ +FD+MPE++ V WN +++GY+ G E
Sbjct: 210 VSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD 269
Query: 308 ------------------EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHA 349
EAL Y EM G K + + ++ AR Q H
Sbjct: 270 IVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHG 329
Query: 350 ALVRHGFG-------------------------------SDIVANTGLVDFYSKWGRMED 378
+V+ GF I + L+ + K G +E
Sbjct: 330 TIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQ 389
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML-RERVIPNHVTFLAVLSACS 437
AR VFD+ K++ SWNA+I+GY + A+ +F +M+ +V P+ +T ++V SA S
Sbjct: 390 AREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAIS 449
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL------------- 484
G E G ++ + P A +I++ + G ++ A +
Sbjct: 450 SLGSLEEGKRAHDYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTIS 508
Query: 485 ------------------------IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
++S P++P +V +L+AC G + LGK E +
Sbjct: 509 PWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESM 568
Query: 521 ---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTML 562
+G+EP + Y ++++ +G+L EA ++K + K M+
Sbjct: 569 KSDHGIEP-DIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 190/366 (51%), Gaps = 14/366 (3%)
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI 392
+IC L+ AK H + D+ +N L++ YS G +A VF++M KN+
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
+W +I + +G GE AI+MF + E IP+ F + AC G + G F SM
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVL 512
SRD+ + P Y ++E+ G LDEA + P+EP ++W L+ R+HGNL L
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLEL 441
Query: 513 GKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKL-MEAAGVLKTLKRKGLTMLPTCSWIEVK 571
G + AE + ++P + LN S G + ++A+ V K +K +L VK
Sbjct: 442 GDYCAEVVEFLDPTR-------LNKQSREGFIPVKASDVEKESLKKRSGILHG-----VK 489
Query: 572 KQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEHEMLLPDVDEE-EQRILKYHSE 630
F GD + + E++Q + NL + GY+ E M L D+D+E ++ +L HSE
Sbjct: 490 SSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSE 549
Query: 631 MLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTC 690
+ A ++N+ P + + RVC +CHNA+K+++ + GRE++ RD RFH +NG C
Sbjct: 550 RIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGAC 609
Query: 691 SCGDYW 696
+C DYW
Sbjct: 610 TCKDYW 615
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
L++MYS CG +A VF++M EK+ W II +A G+ E+A+ ++ ++ G
Sbjct: 294 VLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIP 353
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHV 382
D + C L ++ ++ R +G I LV+ Y+ G +++A
Sbjct: 354 DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 383 FDRM-LRKNVISWNALIAGYGNHGQGE 408
+RM + NV W L+ HG E
Sbjct: 414 VERMPMEPNVDVWETLMNLSRVHGNLE 440
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
L +C ++ K V G + ++ DL + +L M+ CGL +A +F M E++
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
+W +I +G +A + F EE N + F + A LG ++ G +H
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHF 378
Query: 249 CALKRGVGEDSFVA--CALIDMYSKCGSIEDAQCVFDQMPEKSTVG-WNSIISGYALRGY 305
++ R G + +L++MY+ G +++A ++MP + V W ++++ + G
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG- 437
Query: 306 SEEALSIYLEMRDSGAKIDQF 326
LE+ D A++ +F
Sbjct: 438 -------NLELGDYCAEVVEF 451
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 246/498 (49%), Gaps = 38/498 (7%)
Query: 142 VKRVFGYMISNG-FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLV 200
VK++ ++I +G Y+ N ++ ++ G A K+FA MP D S+ +I G
Sbjct: 149 VKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG--VGED 258
G EA + + M + + T +++ L I +G+ +H +RG +
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 259 SFVACALIDMYSKC-------------------------------GSIEDAQCVFDQMPE 287
++ AL+DMY KC G +E AQ VFDQMP+
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 288 KSTVGWNSIISGYALRGYSEEAL-SIYLEMRD-SGAKIDQFTISIVIRICARLASLEHAK 345
+ V WNS++ GY+ +G + + ++ EM K D+ T+ +I A L H +
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
H ++R D ++ L+D Y K G +E A VF K+V W ++I G HG
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
G+QA+++F +M E V PN+VT LAVL+ACS+SGL E G +F M P HY
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHY 508
Query: 466 ACMIELLGREGLLDEAFALI-RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME 524
+++LL R G ++EA ++ + P+ P+++MW ++L+ACR ++ + A +L +E
Sbjct: 509 GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
Query: 525 PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK-S 583
P K YV+L N+Y++ G+ + + ++ +G+ S + + + F+ +K +
Sbjct: 569 PEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Query: 584 HTQTKEIYQKVDNLMDEI 601
H + EI + + +L +E+
Sbjct: 629 HPRWTEIKRILQHLYNEM 646
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 214/420 (50%), Gaps = 40/420 (9%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
++ ++ C +++ G I +G D+++ N +++++ R G ARK+ M
Sbjct: 142 SFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
P RDAVSW +L+S ++ G L++ R
Sbjct: 202 PVRDAVSWNSLLSAYLEKG-----------------------------------LVDEAR 226
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
+ +R V +F +I Y+ G +++A+ VFD MP + V WN++++ YA G
Sbjct: 227 ALFDEMEERNVESWNF----MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 305 YSEEALSIYLEM-RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
E L ++ +M DS K D FT+ V+ CA L SL + H + +HG +
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLA 342
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
T LVD YSK G+++ A VF +++V +WN++I+ HG G+ A+E+F +M+ E
Sbjct: 343 TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
PN +TF+ VLSAC++ G+ ++ ++F MS ++V+P HY CM++LLGR G ++EA
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
L+ P + + +LL AC+ G L + A +L + S Y + N+Y+S G+
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGR 522
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 163/329 (49%), Gaps = 25/329 (7%)
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYS---KCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
+Q H+ LK G+ D+F A L+ + + ++ A + +++ + NS+I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
A E AL+++ EM D+++ + V++ CA E +Q H ++ G +D+
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
LV+ Y + G E AR V DRM ++ +SWN+L++ Y G ++A +F++M E
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEM-EE 234
Query: 421 RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM-----HYACMIELLGRE 475
R N ++ ++S + +GL + E+F SM V AM H C E+L
Sbjct: 235 R---NVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL--- 288
Query: 476 GLLDEAF-ALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL--YGME-PGKLSSY 531
E F ++ + +P V++L+AC G+L G++ + +G+E G L++
Sbjct: 289 ----EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT- 343
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
L++MYS GK+ +A V + ++ ++
Sbjct: 344 -ALVDMYSKCGKIDKALEVFRATSKRDVS 371
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 210/401 (52%), Gaps = 10/401 (2%)
Query: 121 VGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKL 180
V S +D V C L S R RVF S DL + + GL +AR+L
Sbjct: 300 VSTSVFDMYVK-CDRLESAR---RVFDQTRSK----DLKSWTSAMSGYAMSGLTREAREL 351
Query: 181 FADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
F MPER+ VSW ++ G V + + EA + M +E + + T ++ +G+ +
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE-KSTVGWNSIISG 299
++G+Q H + G + VA AL+DMY KCG+++ A F QM E + V WN++++G
Sbjct: 412 QMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
A G SE+ALS + M+ AK ++T++ ++ CA + +L K H L+R G+ D
Sbjct: 472 VARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
+V +VD YSK + A VF +++I WN++I G +G+ ++ E+F +
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
E V P+HVTFL +L AC G E G++ F SMS + + P+ HY CMIEL + G L
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLH 650
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
+ + P +P M + AC+ + LG +AA++L
Sbjct: 651 QLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 195/409 (47%), Gaps = 32/409 (7%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
Y+ L C + ++V ++++ P ++++NR + + +CG + DAR+LF +MP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQ 245
ERD SW +I+ +G E F F M + +FA ++++ + + + RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 246 IHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGY 305
+H +K G + + +++D+Y KC + DA+ VFD++ S V WN I+ Y G+
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 306 SEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG 365
++EA+ ++ +M + + T+S V+ C+R +LE K HA V+ +D V +T
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 366 LVDFYSKWGRMEDARHVFDR-------------------------------MLRKNVISW 394
+ D Y K R+E AR VFD+ M +N++SW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
NA++ GY + + ++A++ M +E ++VT + +L+ CS + G + + R
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
H + ++++ G+ G L A R + W ALLT
Sbjct: 424 -HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 70/464 (15%)
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
DG +++ ++ C + +R ++++ ++ G+ ++ + ++ ++ +C +M D
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
AR++F ++ VSW ++ ++ G EA F M E + T ++++ A +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
+EVG+ IH+ A+K V D+ V+ ++ DMY KC +E A+ VFDQ K W S
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 297 ISGYALRGYS-------------------------------EEALSIYLEMRDSGAKIDQ 325
+SGYA+ G + +EAL MR ID
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T+ ++ +C+ ++ ++ KQAH + RHG+ ++++ L+D Y K G ++ A F +
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 386 MLR-KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
M ++ +SWNAL+ G G+ EQA+ FE M E P+ T +L+ C+
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANIPALNL 514
Query: 445 GWEIFYSMSRD-HKV-------------KPRAMHYACMIELL------------------ 472
G I + RD +K+ K R YA IE+
Sbjct: 515 GKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYA--IEVFKEAATRDLILWNSIIRGC 572
Query: 473 ---GREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG 513
GR + E F L+ + V+P ++ +L AC G++ LG
Sbjct: 573 CRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 253/503 (50%), Gaps = 46/503 (9%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
++KE +D++ +++ G +++ C + ++ K + + NG +Y+
Sbjct: 84 KFKETVDVY--IDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYV 141
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
++ ++ R G + A+K F D+ E++ VSW +L+ G ++SG EA F ++
Sbjct: 142 QTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVF----DKIP 197
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA-CALIDMYSKCGSIEDAQ 279
+ + ++ ++ + A G ++G ++C+L + S + LI Y C ++ A+
Sbjct: 198 EKDAVSWNLIISSYAKKG--DMG---NACSLFSAMPLKSPASWNILIGGYVNCREMKLAR 252
Query: 280 CVFDQMPEKSTVGWNSIISGYA-------------------------------LRGYSEE 308
FD MP+K+ V W ++ISGY G ++
Sbjct: 253 TYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKD 312
Query: 309 ALSIYLEM--RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGL 366
AL ++ +M R+S + D+ T+S V+ ++L + + + HG D + +T L
Sbjct: 313 ALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSL 372
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
+D Y K G A +F + +K+ +S++A+I G G +G +A +F M+ +++ PN
Sbjct: 373 IDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNV 432
Query: 427 VTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
VTF +LSA S+SGL + G++ F SM +DH ++P A HY M+++LGR G L+EA+ LI+
Sbjct: 433 VTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIK 491
Query: 487 SAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLME 546
S P++P +W ALL A +H N+ G+ A +E L +YSS G+ +
Sbjct: 492 SMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDD 551
Query: 547 AAGVLKTLKRKGLTMLPTCSWIE 569
A V ++K K L CSW+E
Sbjct: 552 ARTVRDSIKEKKLCKTLGCSWVE 574
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 206/463 (44%), Gaps = 48/463 (10%)
Query: 133 CVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM--HVRCGLMLDARKLFADMPERDAV 190
CV L + V N EP L +++ LH ++ +++ D+
Sbjct: 13 CVVLEQAKQVHAQLVVNRYNHLEPIL--VHQTLHFTKEFSRNIVTYVKRILKGFNGHDSF 70
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCA 250
SW L+ L + E + ++ M S +++RA + + G+ IH+ A
Sbjct: 71 SWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQA 130
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEAL 310
LK G+ +V L+ +YS+ G IE A+ FD + EK+TV WNS++ GY G +EA
Sbjct: 131 LKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEAR 190
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAA-------------------- 350
++ D + D + +++I A+ + +A +A
Sbjct: 191 RVF----DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCR 246
Query: 351 ---LVRHGFGS----DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
L R F + + V+ ++ Y+K G ++ A +F M +K+ + ++A+IA Y
Sbjct: 247 EMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQ 306
Query: 404 HGQGEQAIEMFEQMLRER--VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
+G+ + A+++F QML + P+ +T +V+SA S G + G + S +H +K
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGIKID 365
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG-----NLVLGKFA 516
+ +I+L + G +AF + + + T + + A++ C ++G N +
Sbjct: 366 DLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATEANSLFTAMI 424
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
+K+ P + ++ LL+ YS SG + E ++K L
Sbjct: 425 EKKI----PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 205/377 (54%), Gaps = 13/377 (3%)
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
F D S FA V ++ ++ GRQIH+ K G + +L+ YS G ++ A
Sbjct: 61 FVDSFSVLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYA 119
Query: 279 QCVFDQMPEK-STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ VFD+ PEK + V W ++IS Y S EA+ ++ M ++D +++ + CA
Sbjct: 120 RQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACAD 179
Query: 338 LASLEHAKQAHAALVRHG--FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
L +++ ++ ++ ++ D+ L++ Y K G E AR +FD +RK+V ++
Sbjct: 180 LGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYT 239
Query: 396 ALIAGYGNHGQGEQAIEMFEQML-----RERVI-PNHVTFLAVLSACSYSGLSERGWEIF 449
++I GY +GQ ++++E+F++M ++ VI PN VTF+ VL ACS+SGL E G F
Sbjct: 240 SMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHF 299
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN 509
SM D+ +KPR H+ CM++L R G L +A I P++P +W LL AC +HGN
Sbjct: 300 KSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
Query: 510 LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIE 569
+ LG+ +++ ++ + YV L N+Y+S G E + + ++++ +P SWIE
Sbjct: 360 VELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKR---RMPGKSWIE 416
Query: 570 VKKQPYAFLCGDKSHTQ 586
+ F+ G ++ +
Sbjct: 417 LGSIINEFVSGPDNNDE 433
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG--FEPDLYMM 161
EA++LF+ +E + ++ G ++ C L +++ + ++ I DL +
Sbjct: 150 EAIELFK--RMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLR 207
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM--WEEF 219
N +L+M+V+ G ARKLF + +D ++ ++I G +G E+ E F M ++
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 220 NDG----RSRTFATMVRASAGLGLIEVG-RQIHSCALKRGVGEDSFVACALIDMYSKCGS 274
D TF ++ A + GL+E G R S + + ++D++ + G
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 275 IEDAQCVFDQMPEK-STVGWNSIISGYALRGYSE 307
++DA +QMP K +TV W +++ +L G E
Sbjct: 328 LKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/457 (29%), Positives = 227/457 (49%), Gaps = 14/457 (3%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF D+Y+ V+ M+ + G M AR F +MP R VSW LISG + G A + F
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA-CALIDMYSK 271
D ++ + G ++ G + L + + + +I Y
Sbjct: 168 --------DQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCN 219
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA-KIDQFTISI 330
I+ A+ +FD MPE++ V WN++I GY +E + ++ EM+ + + D TI
Sbjct: 220 IKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILS 279
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN 390
V+ + +L + H + R + T ++D YSK G +E A+ +FD M K
Sbjct: 280 VLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQ 339
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 450
V SWNA+I GY +G A+++F M+ E P+ +T LAV++AC++ GL E G + F+
Sbjct: 340 VASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFH 398
Query: 451 SMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNL 510
M R+ + + HY CM++LLGR G L EA LI + P EP + + L+AC + ++
Sbjct: 399 VM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDI 457
Query: 511 VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPT-CSWIE 569
+ +K +EP +YV+L N+Y++ K + G++K + RK CS IE
Sbjct: 458 ERAERILKKAVELEPQNDGNYVLLRNLYAAD-KRWDDFGMVKNVMRKNQAKKEVGCSLIE 516
Query: 570 VKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGY 606
+ F+ GD +H + I+ + +L+ ++ Y
Sbjct: 517 INYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 11/299 (3%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
Y+A+++ V + +R+F M + ++H + + ARKLF MP
Sbjct: 179 YNAMMDGFVKSGDMTSARRLFDEMT----HKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 186 ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGR 244
ER+ VSW T+I G + E F M + D T +++ A + G + +G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
H ++ + + V A++DMYSKCG IE A+ +FD+MPEK WN++I GYAL G
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+ AL +++ M K D+ T+ VI C +E ++ + G + I
Sbjct: 355 NARAALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYG 413
Query: 365 GLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
+VD + G +++A + M N I ++ ++ G + E+A E++L++ V
Sbjct: 414 CMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERA----ERILKKAV 468
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 175/370 (47%), Gaps = 24/370 (6%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD-AVSWMTLISGLVDSGNYAE 207
M+ + E ++ + + L + + ARKLF P+RD + ++I +++ Y +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 208 AFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI 266
+F + + +E TF T+ ++ + + G Q+HS + G D +V+ ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 267 DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM---RDS---G 320
DMY+K G + A+ FD+MP +S V W ++ISGY G + A ++ +M +D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
A +D F S + RL + H ++ T ++ Y ++ AR
Sbjct: 181 AMMDGFVKSGDMTSARRLFD----EMTHKT---------VITWTTMIHGYCNIKDIDAAR 227
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSACSYS 439
+FD M +N++SWN +I GY + Q ++ I +F++M + P+ VT L+VL A S +
Sbjct: 228 KLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDT 287
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVA 499
G G E + + K+ + ++++ + G +++A + P E W A
Sbjct: 288 GALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNA 345
Query: 500 LLTACRMHGN 509
++ ++GN
Sbjct: 346 MIHGYALNGN 355
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 201/391 (51%), Gaps = 13/391 (3%)
Query: 187 RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRASAGLGLIEV 242
RD SW ++ISG SG++ E+ F M E G+ R T + AS LGL+
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSRE---GKIRHDLITLLGTISASGNLGLVLQ 599
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYAL 302
GR H A+K D+ + LI MY +C IE A VF + + + WN +IS +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 303 RGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVA 362
E ++ R+ + ++ T ++ +L S + QAH L+R GF ++
Sbjct: 660 NKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 363 NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
+ LVD YS G +E VF ++ +WN++I+ +G HG GE+A+E+F+++
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 423 I-PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
+ PN +F+++LSACS+SG + G + M VKP H ++++LGR G L EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 482 FALIRSAPVEPTK-NMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSS 540
+ I + EP K +W ALL+AC HG+ LGK AE L+ MEP S Y+ L N Y
Sbjct: 837 YEFI-TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVG 895
Query: 541 SGKLMEAAGVLKTLKRKGLTMLPTCSWIEVK 571
G EA + K ++ L LP S I+V+
Sbjct: 896 LGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 206/423 (48%), Gaps = 9/423 (2%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+ V + + G DL +++L + R G ++ + LF ++ E+D + W ++I+ L +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
G Y A F+ M + N+ S T A + L L +H A++ G+ DS +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
AL+++Y+K ++ A+CVF M + V WN+I++ G+ ++L + M SG +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG--LVDFYSKWGRMEDAR 380
D T S VI C+ + L + H +++ G+ + + G ++ YSK G E A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR-ERVIPNHVTFLAVLSACSYS 439
VF+ ++ ++VIS NA++ G+ +G E+A + QM +++ P+ T +++ S C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYA-CMIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
S G + + + +++ RA+ +I++ G+ GL +A L ++ + W
Sbjct: 407 SFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS-WN 464
Query: 499 ALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
++++A +G K +++ Y LS+ + +L SS L+ V L+
Sbjct: 465 SMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQ 524
Query: 556 RKG 558
+ G
Sbjct: 525 KLG 527
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 13/305 (4%)
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA 206
G I + E D + N ++ M+ RC + A K+F + + + SW +IS L +
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 207 EAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI 266
E F+ F + E N+ TF ++ AS LG G Q H ++RG + FV+ AL+
Sbjct: 665 EVFQLFRNLKLEPNE---ITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 267 DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDSGAKIDQ 325
DMYS CG +E VF S WNS+IS + G E+A+ ++ E+ +S + ++
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN--TGLVDFYSKWGRMEDARHVF 383
+ ++ C+ ++ + + FG V +VD + G++ +A
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQM-EEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFI 840
Query: 384 DRMLR-KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLS 442
+ + W AL++ HG + E+ E + P++ ++ L A +Y GL
Sbjct: 841 TGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEME--PDNASYYISL-ANTYVGLG 897
Query: 443 ERGWE 447
GWE
Sbjct: 898 --GWE 900
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%)
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGY 300
E R +H ALK G+ +D + L+ Y + G + + C+FD++ EK + WNS+I+
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITAL 163
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G A+ +++EM G + D T+ + + L H + G D
Sbjct: 164 NQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDS 223
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
L++ Y+K + A VF M ++++SWN ++ +G ++++ F+ M
Sbjct: 224 SLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 421 RVIPNHVTFLAVLSACS 437
+ VTF V+SACS
Sbjct: 284 GQEADTVTFSCVISACS 300
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/540 (28%), Positives = 247/540 (45%), Gaps = 78/540 (14%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+++A++ + + K +FG M E ++ +++ + R G + +A +LF +M
Sbjct: 202 SWNAMIKGYIENDGMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEM 257
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCM----------------------------- 215
PER+ VSW +ISG + Y EA FL M
Sbjct: 258 PERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFR 317
Query: 216 --------------WEEFN-DGRSRTFATMVRASAGL-----GLIEVGRQIHSCA----- 250
WE + DGR + AS+GL L+ + SC
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINR 377
Query: 251 -LKRGVGE-------------DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
LK G E D ++ID Y + G + A +F ++ +K V W +
Sbjct: 378 YLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVM 437
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG- 355
ISG EA S+ +M G K T S+++ ++L+ K H + +
Sbjct: 438 ISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTA 497
Query: 356 -FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMF 414
+ D++ LV Y+K G +EDA +F +M++K+ +SWN++I G +HG ++A+ +F
Sbjct: 498 CYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLF 557
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
++ML PN VTFL VLSACS+SGL RG E+F +M + ++P HY MI+LLGR
Sbjct: 558 KEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGR 617
Query: 475 EGLLDEAFALIRSAPVEPTKNMWVALLTAC----RMHGNLVLGKFAAEKLYGMEPGKLSS 530
G L EA I + P P ++ ALL C R + + AA +L ++P
Sbjct: 618 AGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPG 677
Query: 531 YVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEI 590
+V L N+Y+ G+ + K + KG+ P CSW+ V + FL GDKS ++ ++
Sbjct: 678 HVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 189/411 (45%), Gaps = 48/411 (11%)
Query: 176 DARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR---TFATMVR 232
DA +LF +MPER+ VSW TL++GL+ +G+ +A + F M SR ++ M++
Sbjct: 156 DAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM-------PSRDVVSWNAMIK 208
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVA-CALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
G IE + L + E + V +++ Y + G + +A +F +MPE++ V
Sbjct: 209 -----GYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIV 263
Query: 292 GWNSIISGYALRGYSEEALSIYLEMR---DSGAKIDQFTISIVIRICARLAS--LEHAKQ 346
W ++ISG+A EAL ++LEM+ D+ + + IS+ C L +Q
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAY-ACGGLGVEFRRLGEQ 322
Query: 347 AHAALVRHGFGS---DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
HA ++ +G+ + D LV Y+ G + A+ + + ++ S N +I Y
Sbjct: 323 LHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF--DLQSCNIIINRYLK 380
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
+G E+A +FE R + + + V++ +++ +G R + +F + V
Sbjct: 381 NGDLERAETLFE---RVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT---- 433
Query: 464 HYACMIELLGREGLLDEAFALIRS---APVEPTKNMWVALLTACRMHGNLVLGK----FA 516
+ MI L + L EA +L+ ++P + + LL++ NL GK
Sbjct: 434 -WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 517 AEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
A+ +P L L++MY+ G + +A + + +K T SW
Sbjct: 493 AKTTACYDP-DLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-----DTVSW 537
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 69/338 (20%)
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
+L + + G + +AR LF MPER+ V+ +++G V EA W F +
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEA-------WTLFREMP 135
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC-ALIDMYSKCGSIEDAQCVF 282
+ V +A L + GR + L + E + V+ L+ + G +E A+ VF
Sbjct: 136 KNVVSWTVMLTA---LCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
D MP + V WN++I GY EEA ++ +M +
Sbjct: 193 DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE------------------------ 228
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYG 402
++V T +V Y ++G + +A +F M +N++SW A+I+G+
Sbjct: 229 ---------------KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
Query: 403 NHGQGEQAIEMFEQMLR--ERVIPNHVTFLAVLSACSYSGLSER-------------GWE 447
+ +A+ +F +M + + V PN T +++ AC G+ R GWE
Sbjct: 274 WNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWE 333
Query: 448 IFYSMSRDHKVKPRAMH-YACMIELLGREGLLDEAFAL 484
++ D ++ +H YA + + LL+E+F L
Sbjct: 334 ---TVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDL 368
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 160/374 (42%), Gaps = 53/374 (14%)
Query: 219 FNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
+ G S A ++R + GL+ R + +RG +L+ Y+K G +++A
Sbjct: 38 YRRGFSNEEALILRRLSEGGLVH-ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEA 96
Query: 279 QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR--------------DSGAKID 324
+ +F+ MPE++ V N++++GY EA +++ EM D G D
Sbjct: 97 RVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSED 156
Query: 325 QFTI------------SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+ + ++ R +E AKQ A+ D+V+ ++ Y +
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAV 432
ME+A+ +F M KNV++W +++ GY +G +A +F +M ER N V++ A+
Sbjct: 213 NDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM-PER---NIVSWTAM 268
Query: 433 LSACSYSGLSERGWEIFYSMSRD-HKVKPR-----AMHYACMIELLGREGLLDEAFALIR 486
+S +++ L +F M +D V P ++ YAC GL E L
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC-------GGLGVEFRRLGE 321
Query: 487 SAPVEPTKNMWVALLTACRMHGNLV-----LGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+ N W + R+ +LV G A+ + E L S +++N Y +
Sbjct: 322 QLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKN 381
Query: 542 GKLMEAAGVLKTLK 555
G L A + + +K
Sbjct: 382 GDLERAETLFERVK 395
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 255/568 (44%), Gaps = 68/568 (11%)
Query: 104 EAMDLF-EILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
EA+++F E+ E D + T +V + L ++ +++ G ++ G + + ++
Sbjct: 105 EAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVS 164
Query: 163 RVLHMHVRCGLMLD---------------------------------ARKLFADMPE-RD 188
++HM+ +CG + A +F PE D
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
+SW TLI+G +G EA + + M E +F ++ + L +++G+++H+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA 284
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIE-------------------------------D 277
LK G + FV+ ++D+Y KCG+++ +
Sbjct: 285 RVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE 344
Query: 278 AQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE-MRDSGAKIDQFTISIVIRICA 336
A+ +FD + EK+ V W ++ GY + L + + + D + V+ C+
Sbjct: 345 AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACS 404
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNA 396
A +E K+ H +R G D T VD YSK G +E A +FD ++ + +NA
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNA 464
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
+IAG +HG ++ + FE M P+ +TF+A+LSAC + GL G + F SM +
Sbjct: 465 MIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAY 524
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAP-VEPTKNMWVALLTACRMHGNLVLGKF 515
+ P HY CMI+L G+ LD+A L+ VE + A L AC + N L K
Sbjct: 525 NISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 516 AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPY 575
EKL +E S Y+ + N Y+SSG+ E + ++ K L + CSW + KQ +
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Query: 576 AFLCGDKSHTQTKEIYQKVDNLMDEISR 603
F D SH +T+ IY + + ++S
Sbjct: 645 MFTSSDISHYETEAIYAMLHFVTKDLSE 672
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 244/563 (43%), Gaps = 118/563 (20%)
Query: 118 GADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA 177
G+ + + + LVN+ +R + VF M+ E ++Y N V+ +V+ + +A
Sbjct: 18 GSTLTAVSSNQLVNLYSKSGLLREARNVFDEML----ERNVYSWNAVIAAYVKFNNVKEA 73
Query: 178 RKLF-ADMPERDAVSWMTLISGLVDS-GNYAEAFEQFLCMWEEFNDG---RSRTFATMVR 232
R+LF +D ERD +++ TL+SG + G +EA E F M + D T TMV+
Sbjct: 74 RELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVK 133
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG------------------- 273
SA L + G Q+H +K G F +LI MYSKCG
Sbjct: 134 LSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS 193
Query: 274 --------------SIEDAQCVFDQMPE-KSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
I+ A VF + PE T+ WN++I+GYA GY EEAL + + M +
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE 253
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF--------- 369
+G K D+ + V+ + + L SL+ K+ HA ++++G S+ ++G+VD
Sbjct: 254 NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKY 313
Query: 370 ----------------------YSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQG 407
YS G+M +A+ +FD + KN++ W A+ GY N Q
Sbjct: 314 AESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQP 373
Query: 408 EQAIEMFEQML-RERVIPNHVTFLAVLSACSYSGLSERGWEI------------------ 448
+ +E+ + E P+ + ++VL ACS E G EI
Sbjct: 374 DSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTA 433
Query: 449 FYSMSR------------DHKVKPRAMHYACMIELL---GREGLLDEAFALIRSAPVEPT 493
F M D + + Y MI G E + F + +P
Sbjct: 434 FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPD 493
Query: 494 KNMWVALLTACRMHGNLVLGKFAAEKL---YGMEPGKLSSYVMLLNMYSSSGKLMEAAGV 550
+ ++ALL+ACR G ++ G+ + + Y + P + Y ++++Y + +L +A +
Sbjct: 494 EITFMALLSACRHRGLVLEGEKYFKSMIEAYNISP-ETGHYTCMIDLYGKAYRLDKAIEL 552
Query: 551 LK---TLKRKGLTM---LPTCSW 567
++ +++ + + L CSW
Sbjct: 553 MEGIDQVEKDAVILGAFLNACSW 575
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 212/412 (51%), Gaps = 34/412 (8%)
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFN-DGRSRTFATMVRASAGLGLIEVGRQIHS 248
+S +S + GN+ +A FL M F + F+ +++ A +G +H+
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
++K + FV CAL+DMY KC S+ A+ +FD++P+++ V WN++IS Y G +E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 309 ALSIYLEM-------------------RDSGAKIDQF--------------TISIVIRIC 335
A+ +Y M D + +F T+ ++ C
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 336 ARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWN 395
+ + + K+ H+ R+ +GLV+ Y + G + + VFD M ++V++W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
+LI+ Y HG E A++ F++M +V P+ + FL VL ACS++GL++ F M D
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF 515
+ ++ HY+C++++L R G +EA+ +I++ P +PT W ALL ACR +G + L +
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 516 AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSW 567
AA +L +EP ++YV+L +Y S G+ EA + +K G+ + P SW
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 163/375 (43%), Gaps = 56/375 (14%)
Query: 89 LCSQIEKLALCNRYKEAMDLFEILELEGDGA-DVGGSTYD-ALVNVCVGLRSIRGVKRVF 146
L Q+ A +++A++LF L++ A + + AL + R + G V
Sbjct: 15 LTKQLSSYANQGNHEQALNLF--LQMHSSFALPLDAHVFSLALKSCAAAFRPVLG-GSVH 71
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA 206
+ + + F + ++ +L M+ +C + ARKLF ++P+R+AV W +IS G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 207 EAFEQFLCM-----WEEFN----------DGRSR------------------TFATMVRA 233
EA E + M FN DG R T +V A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 234 SAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGW 293
+ +G + ++IHS A + + + L++ Y +CGSI Q VFD M ++ V W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV- 352
+S+IS YAL G +E AL + EM + D V++ C+ HA A ALV
Sbjct: 252 SSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACS------HAGLADEALVY 305
Query: 353 ------RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-NVISWNALIAGYGNHG 405
+G + + LVD S+ GR E+A V M K +W AL+ N+G
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 406 QGEQAIEMFEQMLRE 420
+ IE+ E RE
Sbjct: 366 E----IELAEIAARE 376
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 226/424 (53%), Gaps = 6/424 (1%)
Query: 133 CVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSW 192
C L+ R + V GY++ +G E +++ + + M+ +CG++ DA K+F ++P+R+AV+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 193 MTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALK 252
L+ G V +G EA F M ++ + T +T + ASA +G +E G+Q H+ A+
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 253 RGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
G+ D+ + +L++ Y K G IE A+ VFD+M EK V WN IISGY +G E+A+ +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
MR K D T++ ++ AR +L+ K+ +RH F SDIV + ++D Y+K
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAV 432
G + DA+ VFD + K++I WN L+A Y G +A+ +F M E V PN +T+ +
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 433 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS---AP 489
+ + +G + ++F M + + P + + M+ + + G +EA +R +
Sbjct: 483 ILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 490 VEPTKNMWVALLTACRMHGNLVLGK-FAAEKLYGMEPGKLSSY-VMLLNMYSSSGKLMEA 547
+ P L+AC +L +G+ + ++ L S L++MY+ G + +A
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Query: 548 AGVL 551
V
Sbjct: 602 EKVF 605
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 226/473 (47%), Gaps = 42/473 (8%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T L++ +++ K V Y I + FE D+ + + V+ M+ +CG ++DA+K+F
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
E+D + W TL++ +SG EA F M E
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE-------------------------- 470
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGY 300
GV + +I + G +++A+ +F QM + + W ++++G
Sbjct: 471 ---------GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 301 ALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDI 360
G SEEA+ +M++SG + + F+I++ + CA LASL + H ++R+ S +
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSL 581
Query: 361 VA-NTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
V+ T LVD Y+K G + A VF L + NA+I+ Y +G ++AI ++ +
Sbjct: 582 VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEG 641
Query: 420 ERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
+ P+++T VLSAC+++G + EIF + +KP HY M++LL G +
Sbjct: 642 VGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETE 701
Query: 480 EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYS 539
+A LI P +P M +L+ +C L + + KL EP +YV + N Y+
Sbjct: 702 KALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYA 761
Query: 540 SSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQP--YAFLCGDKSHTQTKEI 590
G E + + +K KGL P CSWI++ + + F+ DK+HT+ EI
Sbjct: 762 VEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 242/487 (49%), Gaps = 11/487 (2%)
Query: 77 EDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGL 136
E AH PS++ ++ L KEA+ L + E++ +G Y ++ CV
Sbjct: 28 EQAH--SPSSTSYFHRVSSLCKNGEIKEALSL--VTEMDFRNLRIGPEIYGEILQGCVYE 83
Query: 137 RSIRGVKRVFGYMISNG--FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMT 194
R + K++ ++ NG + + Y+ +++ + +C + A LF+ + R+ SW
Sbjct: 84 RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAA 143
Query: 195 LISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRG 254
+I G A F+ M E + + +A L GR +H +K G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSG 203
Query: 255 VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYL 314
+ + FVA +L DMY KCG ++DA VFD++P+++ V WN+++ GY G +EEA+ ++
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFS 263
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
+MR G + + T+S + A + +E KQ+HA + +G D + T L++FY K G
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG 323
Query: 375 RMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+E A VFDRM K+V++WN +I+GY G E AI M + M E++ + VT ++S
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 435 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTK 494
A + + + G E+ R H + + + ++++ + G + +A + S VE
Sbjct: 384 AAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKKVFDST-VEKDL 441
Query: 495 NMWVALLTACRMHG--NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLK 552
+W LL A G L F +L G+ P ++ +++L++ +G++ EA +
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL-RNGQVDEAKDMFL 500
Query: 553 TLKRKGL 559
++ G+
Sbjct: 501 QMQSSGI 507
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 243/499 (48%), Gaps = 55/499 (11%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
K SG I A Y+E++D F E+ DG + +L+ L +
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFR--EMYKDGLKLDAFIVPSLLKASRNL-----L 131
Query: 143 KRVFGYMI-----SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLIS 197
R FG MI +E D ++++ ++ M+ + G + +ARK+F+D+ E+D V + +IS
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
G +A +A L L++ + + G+
Sbjct: 192 G----------------------------YANNSQADEALNLVKDMKLL-------GIKP 216
Query: 258 DSFVACALIDMYS------KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALS 311
D ALI +S K I + C+ P+ V W SIISG +E+A
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPD--VVSWTSIISGLVHNFQNEKAFD 274
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
+ +M G + TI ++ C LA ++H K+ H V G + L+D Y
Sbjct: 275 AFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYG 334
Query: 372 KWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
K G + +A +F + +K +++N++I Y NHG ++A+E+F+QM +H+TF A
Sbjct: 335 KCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTA 394
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE 491
+L+ACS++GL++ G +F M +++ PR HYACM++LLGR G L EA+ +I++ +E
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME 454
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
P +W ALL ACR HGN+ L + AA+ L +EP + ++L ++Y+++G +
Sbjct: 455 PDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMK 514
Query: 552 KTLKRKGLTMLPTCSWIEV 570
K +K+K SW+E
Sbjct: 515 KMIKKKRFRRFLGSSWVET 533
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 204/446 (45%), Gaps = 70/446 (15%)
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYA 206
+++++G + +++ +V CG +LDARK+F +MP+RD + +I +G Y
Sbjct: 40 AHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQ 99
Query: 207 EAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALI 266
E+ + F M+++ + ++++AS L E G+ IH LK D+F+ +LI
Sbjct: 100 ESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLI 159
Query: 267 DMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQF 326
DMYSK G + +A+ VF + E+ V +N++ISGYA ++EAL++ +M+ G K D
Sbjct: 160 DMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVI 219
Query: 327 TISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM 386
T + +I + + + E + + G+ D
Sbjct: 220 TWNALISGFSHMRNEEKVSEILELMCLDGYKPD--------------------------- 252
Query: 387 LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
V+SW ++I+G ++ Q E+A + F+QML + PN T + +L AC+ + G
Sbjct: 253 ----VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM---------- 496
EI + S ++ + ++++ G+ G + EA L R P + T
Sbjct: 309 EI-HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH 367
Query: 497 ------------------------WVALLTACRMHGNLVLGK---FAAEKLYGMEPGKLS 529
+ A+LTAC G LG+ + Y + P +L
Sbjct: 368 GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVP-RLE 426
Query: 530 SYVMLLNMYSSSGKLMEAAGVLKTLK 555
Y ++++ +GKL+EA ++K ++
Sbjct: 427 HYACMVDLLGRAGKLVEAYEMIKAMR 452
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 33/366 (9%)
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L+ G+Y E E +GR R F GR +H+ + G+
Sbjct: 13 LLSIGSYVELIEA---------NGRDRLFCR-------------GRVLHAHLVTSGIARL 50
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRD 318
+ +A L+ Y +CG + DA+ VFD+MP++ G +I A GY +E+L + EM
Sbjct: 51 TRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYK 110
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G K+D F + +++ L E K H +++ + SD + L+D YSK+G + +
Sbjct: 111 DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGN 170
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
AR VF + ++++ +NA+I+GY N+ Q ++A+ + + M + P+ +T+ A++S S+
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL----GREGLLDEAFALIRSAPVEPTK 494
E+ EI M D KP + + +I L E D AF + + + P
Sbjct: 231 MRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFD-AFKQMLTHGLYPNS 288
Query: 495 NMWVALLTACRMHGNLVLGK--FAAEKLYGMEP-GKLSSYVMLLNMYSSSGKLMEAAGVL 551
+ LL AC + GK + G+E G + S LL+MY G + EA +
Sbjct: 289 ATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRS--ALLDMYGKCGFISEAMILF 346
Query: 552 KTLKRK 557
+ +K
Sbjct: 347 RKTPKK 352
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 222/441 (50%), Gaps = 3/441 (0%)
Query: 139 IRGVKRVFGYMISNGFEP-DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLIS 197
+R +++ G I +G +L + N V+ M+ R G+ A +F M +RD VSW LI
Sbjct: 149 VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
DSGN A +QF M E T + +V + L + G+Q + +K G
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLS 268
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
+S V A IDM+SKC ++D+ +F ++ + +V NS+I Y+ E+AL +++
Sbjct: 269 NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAM 328
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+ D+FT S V+ L+H H+ +++ GF D T L++ Y K G ++
Sbjct: 329 TQSVRPDKFTFSSVLS-SMNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVD 387
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVTFLAVLSAC 436
A VF + K++I WN +I G + + +++ +F Q+L + + P+ VT + +L AC
Sbjct: 388 LAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVAC 447
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
Y+G G +IF SM + H V P HYAC+IELL R G+++EA + P EP+ ++
Sbjct: 448 CYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHI 507
Query: 497 WVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
W +L A G+ L + A+ + EP Y++L+ +Y + + + + +
Sbjct: 508 WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNE 567
Query: 557 KGLTMLPTCSWIEVKKQPYAF 577
L S I ++ ++F
Sbjct: 568 HKLKSAQGSSKISIESSVFSF 588
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 162/344 (47%), Gaps = 39/344 (11%)
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD-- 183
+ LVN + +S K V ++ GF Y NR L ++ + G +++A +LF D
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 184 -----------------------------MPERDAVSWMTLISGLVDSGNYAEAFEQFLC 214
MPERD VSW T+ISGLV G + F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 215 M--WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVAC-ALIDMYSK 271
M WE R F + AS + + G QIH A+ GV + V +++DMY +
Sbjct: 127 MQRWEI----RPTEFTFSILASL-VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 272 CGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
G + A VF M ++ V WN +I + G E AL + MR+ + D++T+S+V
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMV 241
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV 391
+ IC+ L L KQA A ++ GF S+ + +D +SK R++D+ +F + + +
Sbjct: 242 VSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDS 301
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ N++I Y H GE A+ +F + + V P+ TF +VLS+
Sbjct: 302 VLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 4/168 (2%)
Query: 271 KCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
K G + +A +FD+MPE+ V WN++ISG G+ E + ++ +M+ + +FT SI
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGS-DIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
+ + + + H +Q H + G ++V ++D Y + G + A VF M +
Sbjct: 142 LASL---VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
+V+SWN LI + G E A++ F M + P+ T V+S CS
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 159/344 (46%), Gaps = 18/344 (5%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +V++C LR + K+ I GF + ++ + M +C + D+ KLF ++
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Query: 185 PERDAVSWMTLISGLVDSGNYA------EAFEQFLCMWEEFNDGRSRTFATMVRASAGLG 238
+ D+V ++I G+Y+ +A F+ + TF++ V +S
Sbjct: 297 EKWDSVLCNSMI------GSYSWHCCGEDALRLFILAMTQSVRPDKFTFSS-VLSSMNAV 349
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
+++ G +HS +K G D+ VA +L++MY K GS++ A VF + K + WN++I
Sbjct: 350 MLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIM 409
Query: 299 GYALRGYSEEALSIYLE-MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR-HGF 356
G A + E+L+I+ + + + K D+ T+ ++ C + Q +++ + HG
Sbjct: 410 GLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGV 469
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFE 415
+++ + G + +A+ + D++ + W ++ + G A + +
Sbjct: 470 NPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAK 529
Query: 416 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVK 459
ML E + +L ++ + E ++ Y+M+ +HK+K
Sbjct: 530 TML-ESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMN-EHKLK 571
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
AK HA L+ GF + Y K G + +A +FD + KN I+WN + G
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
+G A+++F++M ER + + T ++ L +C G E G +F+ M R +++P
Sbjct: 83 NGYLNNALDLFDEM-PERDVVSWNTMISGLVSC---GFHEYGIRVFFDMQR-WEIRPTEF 137
Query: 464 HYACMIELL 472
++ + L+
Sbjct: 138 TFSILASLV 146
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/470 (30%), Positives = 240/470 (51%), Gaps = 24/470 (5%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
+ + LF L++ D+ T+ ++ C L ++V MI G E
Sbjct: 66 NDTLALF--LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ M+ + G ++D+ ++F + E+D VSW L+SG + +G EA F M+ E +
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV-ACALIDMYSKCGSIEDAQCV 281
T +++V+ A L +++ G+Q+H A+ G D V A+I YS G I +A V
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVH--AMVVVTGRDLVVLGTAMISFYSSVGLINEAMKV 241
Query: 282 FDQMP-EKSTVGWNSIISG-YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
++ + V NS+ISG R Y E L + S + + +S + C+ +
Sbjct: 242 YNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM------SRQRPNVRVLSSSLAGCSDNS 295
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIA 399
L KQ H +R+GF SD GL+D Y K G++ AR +F + K+V+SW ++I
Sbjct: 296 DLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMID 355
Query: 400 GYGNHGQGEQAIEMFEQMLRE--RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
Y +G G +A+E+F +M E V+PN VTFL V+SAC+++GL + G E F M ++
Sbjct: 356 AYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYR 415
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKN----MWVALLTACRMHGNLVLG 513
+ P HY C I++L + G +E + L+ ++ +WVA+L+AC ++ +L G
Sbjct: 416 LVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRG 475
Query: 514 KFAAEKLYGME---PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
++ A +L ME P S YV++ N Y++ GK + LK KGL
Sbjct: 476 EYVARRL--MEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLV 523
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 214/429 (49%), Gaps = 21/429 (4%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
A LF ++P+RD S + +S + SGN + FL + D S TF ++ A +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
L E GRQ+H+ +K+G + ALIDMYSK G + D+ VF+ + EK V WN++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
+SG+ G +EAL ++ M +I +FT+S V++ CA L L+ KQ HA +V G
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG- 215
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQGEQAIEMFE 415
+V T ++ FYS G + +A V++ + + + + N+LI+G + ++A F
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA---FL 272
Query: 416 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
M R+R PN + L+ CS + G +I R+ V + M ++ G+
Sbjct: 273 LMSRQR--PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLM-DMYGKC 329
Query: 476 GLLDEAFALIRSAPVEPTKNMWVALLTACRMHGN----LVLGKFAAEKLYGMEPGKLSSY 531
G + +A + R+ P + + W +++ A ++G+ L + + E+ G+ P + ++
Sbjct: 330 GQIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSV-TF 387
Query: 532 VMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIY 591
+++++ + +G + E +K K + T ++ F+ +T+EI+
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYV-------CFIDILSKAGETEEIW 440
Query: 592 QKVDNLMDE 600
+ V+ +M+
Sbjct: 441 RLVERMMEN 449
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 19/420 (4%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
++ G D+ ++ ++ + RCG ++ A +L+A + V +++S + G+ A
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGL---------IEVGRQIHSCALKRGVGEDS 259
F ++R + A A +G+ I++G +H A+K G+ +
Sbjct: 332 VVYF---------SKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKT 382
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
V LI MYSK +E +F+Q+ E + WNS+ISG G + A ++ +M +
Sbjct: 383 LVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLT 442
Query: 320 GAKI-DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G + D TI+ ++ C++L L K+ H +R+ F ++ T L+D Y+K G
Sbjct: 443 GGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ 502
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
A VF + +WN++I+GY G +A+ + +M + + P+ +TFL VLSAC++
Sbjct: 503 AESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNH 562
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
G + G F +M ++ + P HYA M+ LLGR L EA LI ++P +W
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 499 ALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
ALL+AC +H L +G++ A K++ ++ YV++ N+Y++ + V +K G
Sbjct: 623 ALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 159/312 (50%), Gaps = 11/312 (3%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
V++V ++ +G + +Y+ +L+++++ G + A+ LF +MPERD V W LI G
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+G +A++ F+ M ++ + T ++ G + GR +H A K G+ DS V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
ALI YSKC + A+ +F +M +KSTV WN++I Y+ G EEA++++ M +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
+I TI ++ A + H + H +V+ G +DI T LV YS+ G + A
Sbjct: 249 EISPVTIINLLS-----AHVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAER 302
Query: 382 VFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS-- 439
++ + +++ ++++ Y G + A+ F + + + + V + +L C S
Sbjct: 303 LYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSH 362
Query: 440 ---GLSERGWEI 448
G+S G+ I
Sbjct: 363 IDIGMSLHGYAI 374
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 15/370 (4%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
+ V G +G E D + N ++ + +C + A LF +M ++ VSW T+I S
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
G EA F M+E+ + T ++ A +H +K G+ D V
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVV 284
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAK 322
+L+ YS+CG + A+ ++ + S VG SI+S YA +G + A+ + + R K
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 323 IDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV 382
ID + ++ C + + ++ H ++ G + + GL+ YSK+ +E +
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 383 FDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ-MLRERVIPNHVTFLAVLSACSYSGL 441
F+++ +ISWN++I+G G+ A E+F Q ML ++P+ +T ++L+ CS
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 442 SERGWEIF-YSMSRDHKVKPRAMHYAC--MIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
G E+ Y++ + + + ++ C +I++ + G +A ++ +S P W
Sbjct: 465 LNLGKELHGYTLRNNFENE----NFVCTALIDMYAKCGNEVQAESVFKSIKA-PCTATWN 519
Query: 499 ALLTACRMHG 508
++++ + G
Sbjct: 520 SMISGYSLSG 529
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 215/445 (48%), Gaps = 40/445 (8%)
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWE 217
LY N++ +H ++L + L A + V + TLI + +G Y + F M
Sbjct: 24 LYSSNQIKQIHT---VLLTSNALVASRWKTKCV-YNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 218 EFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIED 277
+ TF ++++A+ + G +H ALKRG D FV + + Y + G +E
Sbjct: 80 SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLES 139
Query: 278 AQCVFD-------------------------------QMPEKSTVGWNSIISGYALRGYS 306
++ +FD +MP V W ++I+G++ +G
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLH 199
Query: 307 EEALSIYLEMRDSGAKI---DQFTISIVIRICARL--ASLEHAKQAHAALVRHGFGSDIV 361
+AL ++ EM + + ++ T V+ CA + KQ H ++
Sbjct: 200 AKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTT 259
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
T L+D Y K G +E A +FD++ K V +WNA+I+ ++G+ +QA+EMFE M
Sbjct: 260 LGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSY 319
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
V PN +T LA+L+AC+ S L + G ++F S+ ++K+ P + HY C+++L+GR GLL +A
Sbjct: 320 VHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDA 379
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
I+S P EP ++ ALL AC++H N LG ++L G++P YV L +
Sbjct: 380 ANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALD 439
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCS 566
EA + K + G+ +P S
Sbjct: 440 SNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
M + P + N +L R G M A + F MP D VSW T+I+G G +A+A
Sbjct: 143 MFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKA 202
Query: 209 FEQFLCMWEE---FNDGRSRTFATMVRASAGL--GLIEVGRQIHSCALKRGVGEDSFVAC 263
F M + TF +++ + A G I +G+QIH + + + + +
Sbjct: 203 LMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGT 262
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
AL+DMY K G +E A +FDQ+ +K WN+IIS A G ++AL ++ M+ S
Sbjct: 263 ALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHP 322
Query: 324 DQFTISIVIRICAR 337
+ T+ ++ CAR
Sbjct: 323 NGITLLAILTACAR 336
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 238/468 (50%), Gaps = 40/468 (8%)
Query: 133 CVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSW 192
CV R + G K + I G D+ + + ++ M+ +CG ++ ARK+F +MPER+ +W
Sbjct: 57 CVVPRVVLG-KLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 193 MTLISGLVDSGNYAEA---FEQF-LC----MWEEFNDGRSR---------TFATM----- 230
+I G + +G+ A FE+ +C W E G + F M
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 231 -VRA-SAGLGLIEVGRQIHSCALKRGVGED-----SFVACALIDMYSKCGSIEDAQCVFD 283
V+A S LG+ R++ R ED +FV ++ Y + G + +A+ +F
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDA---RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFY 232
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
++ + V WN++I+GYA GYS++A+ + M+ G + D T+S ++ CA+ L+
Sbjct: 233 RVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDV 292
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGN 403
++ H+ + G + + L+D Y+K G +E+A VF+ + ++V N++I+
Sbjct: 293 GREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAI 352
Query: 404 HGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 463
HG+G++A+EMF M + P+ +TF+AVL+AC + G G +IF M + VKP
Sbjct: 353 HGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVK 411
Query: 464 HYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM 523
H+ C+I LLGR G L EA+ L++ V+P + ALL AC++H + + + K+
Sbjct: 412 HFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIET 470
Query: 524 EPGKLSSY-----VMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCS 566
+SY + N+Y+ + + A + ++++GL P S
Sbjct: 471 AGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 50/338 (14%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
++A +LFE + E + ++ V V R + ++ F + E + ++ +
Sbjct: 161 EKARELFERMPFELKNV----KAWSVMLGVYVNNRKMEDARKFF----EDIPEKNAFVWS 212
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ + R G + +AR +F + RD V W TLI+G +G +A + F M E +
Sbjct: 213 LMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEP 272
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
+ T ++++ A A G ++VGR++HS RG+ + FV+ ALIDMY+KCG +E+A VF
Sbjct: 273 DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
+ + +S NS+IS A+ G +EAL ++ M K D+ T V+ C
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV------ 386
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALI 398
HG G + + +F M ++ NV + LI
Sbjct: 387 -----------HG------------------GFLMEGLKIFSEMKTQDVKPNVKHFGCLI 417
Query: 399 AGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
G G+ ++A + ++M V PN A+L AC
Sbjct: 418 HLLGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGAC 452
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 17/394 (4%)
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVAN 363
G ++A+ I R+ G +D + + ++C +L+ AK H + SDI A
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 364 TGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI 423
+++ YS G +EDA VF+ M +N+ +W +I + +GQGE AI+ F + +E
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 424 PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA 483
P+ F + AC G G F SM +++ + P HY ++++L G LDEA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 484 LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGK 543
+ S +EP ++W L+ R+HG+L+LG + + ++ + LN S +G
Sbjct: 340 FVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASR-------LNKESKAGL 390
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISR 603
+ + L K + + P GD S + +E+Y + +L + +
Sbjct: 391 VPVKSSDLVKEKLQRMAKGPNYGI-------RYMAAGDISRPENRELYMALKSLKEHMIE 443
Query: 604 HGYIEEHEMLLPDVDEEEQ-RILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNA 662
GY+ ++ L DVD+E + L H+E ++TP + +++ + RVC +CHNA
Sbjct: 444 IGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNA 503
Query: 663 IKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+KL++ + GRE++ RDA RFHH ++G CSC +YW
Sbjct: 504 LKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
++I+MYS CGS+EDA VF+ MPE++ W +I +A G E+A+ + + G K
Sbjct: 221 SIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKP 280
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHV 382
D + C L + ++ + +G + LV ++ G +++A
Sbjct: 281 DGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRF 340
Query: 383 FDRMLRKNVISWNALIAGYGNHGQ---GEQAIEMFEQMLRERV 422
+ M NV W L+ HG G++ +M EQ+ R+
Sbjct: 341 VESM-EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRL 382
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 193/393 (49%), Gaps = 34/393 (8%)
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE------- 276
S TF +++ ++ G+ H A+K G + V +L+ MY+ CG+++
Sbjct: 118 SYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFV 177
Query: 277 ------------------------DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
A +FD+MP+K+ + WN +IS Y ++S+
Sbjct: 178 EIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISL 237
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+ EM +G + ++ T+ +++ C R A L+ + HA+L+R S +V +T L+D Y K
Sbjct: 238 FREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGK 297
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAV 432
+ AR +FD + +N ++WN +I + HG+ E +E+FE M+ + P+ VTF+ V
Sbjct: 298 CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGV 357
Query: 433 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP--- 489
L C+ +GL +G + M + ++KP H CM L G +EA +++ P
Sbjct: 358 LCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDED 417
Query: 490 VEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAG 549
V P W LL++ R GN LG+ A+ L +P Y +L+N+YS +G+ +
Sbjct: 418 VTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNR 477
Query: 550 VLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDK 582
V + +K + + +P C +++K+ + G K
Sbjct: 478 VREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 45/309 (14%)
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS 202
K G I +G + L + N ++HM+ CG + A+KLF ++P+RD VSW ++I+G+V +
Sbjct: 138 KMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRN 197
Query: 203 GNYAEAFEQF---------------------------LCMWEEFN----DGRSRTFATMV 231
G+ A + F + ++ E G T ++
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 232 RASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV 291
A ++ GR +H+ ++ + + ALIDMY KC + A+ +FD + ++ V
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 292 GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
WN +I + L G E L ++ M + + D+ T V+ CAR A L Q++ +L
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCAR-AGLVSQGQSYYSL 376
Query: 352 VRHGFGSDIVANTG----LVDFYSKWGRMEDARHVFDRMLRKNV----ISWNALIAG--- 400
+ F I N G + + YS G E+A + ++V W L++
Sbjct: 377 MVDEF--QIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRF 434
Query: 401 YGNHGQGEQ 409
GN GE
Sbjct: 435 TGNPTLGES 443
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
Q+H+ + G DS A L+ S+ G ++ + + N + Y +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCA--NPVFKAYLVSS 97
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
++AL Y ++ G D +T +I + ++ K H ++HG +
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+ Y+ G ++ A+ +F + +++++SWN++IAG +G A ++F++M + +I
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 425 NHVTFLAVLSA 435
++ A L A
Sbjct: 218 WNIMISAYLGA 228
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 197/373 (52%), Gaps = 3/373 (0%)
Query: 129 LVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD 188
L+N+C ++V G M+ G +L + + +++ + +CG + A + F M E+D
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 189 AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS 248
+SW +IS G+ +A F+ M + T ++++A + + GRQ+HS
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 249 CALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEE 308
+KR + D FV +L+DMY+KCG I D + VFD M ++TV W SII+ +A G+ EE
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
A+S++ M+ + T+ ++R C + +L K+ HA ++++ ++ + LV
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 369 FYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
Y K G DA +V ++ ++V+SW A+I+G + G +A++ ++M++E V PN T
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSA 488
+ + L AC+ S G I +S+++ + + +I + + G + EAF + S
Sbjct: 489 YSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 489 PVEPTKNMWVALL 501
P E W A++
Sbjct: 548 P-EKNLVSWKAMI 559
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 196/374 (52%), Gaps = 8/374 (2%)
Query: 139 IRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISG 198
+R +KR+ + + +Y N ++ VR G ++ ARK+F MPE++ V+W +I G
Sbjct: 98 MRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDG 157
Query: 199 LVDSGNYAEA---FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
+ G EA FE ++ F + R F ++ + E+GRQ+H +K GV
Sbjct: 158 YLKYGLEDEAFALFEDYVKHGIRFTN--ERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV 215
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLE 315
G + V +L+ Y++CG + A FD M EK + W ++IS + +G+ +A+ +++
Sbjct: 216 G-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M + ++FT+ +++ C+ +L +Q H+ +V+ +D+ T L+D Y+K G
Sbjct: 275 MLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE 334
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ D R VFD M +N ++W ++IA + G GE+AI +F M R +I N++T +++L A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKN 495
C G G E+ + ++ ++ + ++ L + G +AF +++ P +
Sbjct: 395 CGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 496 MWVALLTACRMHGN 509
W A+++ C G+
Sbjct: 454 -WTAMISGCSSLGH 466
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 161/312 (51%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T +++ C +++R ++V ++ + D+++ ++ M+ +CG + D RK+F M
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGM 345
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
R+ V+W ++I+ G EA F M + T +++RA +G + +G+
Sbjct: 346 SNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRG 304
++H+ +K + ++ ++ L+ +Y KCG DA V Q+P + V W ++ISG + G
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 305 YSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANT 364
+ EAL EM G + + FT S ++ CA SL + H+ ++ S++ +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGS 525
Query: 365 GLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
L+ Y+K G + +A VFD M KN++SW A+I GY +G +A+++ +M E
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEV 585
Query: 425 NHVTFLAVLSAC 436
+ F +LS C
Sbjct: 586 DDYIFATILSTC 597
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
EA+D + E+ +G + TY + + C S+ + + N ++++ +
Sbjct: 469 EALDFLK--EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 526
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++HM+ +CG + +A ++F MPE++ VSW +I G +G EA + M E +
Sbjct: 527 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 586
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALK 252
FAT++ + L E +C L+
Sbjct: 587 DYIFATILSTCGDIELDEAVESSATCYLE 615
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 8/335 (2%)
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
T T++R + + I+ Q+ +R D LID K I A+ +FD M
Sbjct: 154 TLNTLIRVYSLIAPIDSALQLFDENPQR----DVVTYNVLIDGLVKAREIVRARELFDSM 209
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
P + V WNS+ISGYA + EA+ ++ EM G K D I + CA+ + K
Sbjct: 210 PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGK 269
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
H R D TGLVDFY+K G ++ A +F+ K + +WNA+I G HG
Sbjct: 270 AIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHG 329
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
GE ++ F +M+ + P+ VTF++VL CS+SGL + +F M + V HY
Sbjct: 330 NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY 389
Query: 466 ACMIELLGREGLLDEAFALIRSAPVEPTKN----MWVALLTACRMHGNLVLGKFAAEKLY 521
CM +LLGR GL++EA +I P + W LL CR+HGN+ + + AA ++
Sbjct: 390 GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Query: 522 GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
+ P Y +++ MY+++ + E V + + R
Sbjct: 450 ALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 6/260 (2%)
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
D+ N ++ V+ ++ AR+LF MP RD VSW +LISG + EA + F M
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
+ + + A A G + G+ IH ++ + DSF+A L+D Y+KCG I+
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 277 DAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
A +F+ +K+ WN++I+G A+ G E + + +M SG K D T V+ C+
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 337 RLASLEHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML-----RKN 390
++ A+ + + ++ + D + G +E+A + ++M R+
Sbjct: 362 HSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 391 VISWNALIAGYGNHGQGEQA 410
+++W+ L+ G HG E A
Sbjct: 422 LLAWSGLLGGCRIHGNIEIA 441
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 120/234 (51%), Gaps = 9/234 (3%)
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
D FT++ +IR+ + +A ++ A Q L D+V L+D K + AR +F
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQ----LFDENPQRDVVTYNVLIDGLVKAREIVRARELF 206
Query: 384 DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
D M ++++SWN+LI+GY +AI++F++M+ + P++V ++ LSAC+ SG +
Sbjct: 207 DSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQ 266
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
+G I + ++ ++ + +++ + G +D A + + T W A++T
Sbjct: 267 KGKAI-HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCS-DKTLFTWNAMITG 324
Query: 504 CRMHGN--LVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
MHGN L + F G++P + +++ +L S SG + EA + ++
Sbjct: 325 LAMHGNGELTVDYFRKMVSSGIKPDGV-TFISVLVGCSHSGLVDEARNLFDQMR 377
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 202/435 (46%), Gaps = 41/435 (9%)
Query: 104 EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNR 163
+A+ LF + G + G TY +++ V ++ + +++ G +I NG E + + N
Sbjct: 299 KALKLFVSMPEHGFSPNQG--TYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 164 VLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
++ + +CG + D+R F + +++ V W L+SG + FL M +
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQMLQMGFRPT 415
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
TF+T +++ L +Q+HS ++ G ++ +V +L+ Y+K + DA + D
Sbjct: 416 EYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD 471
Query: 284 --------------------------------QMPEKSTVGWNSIISGYALRGYSEEALS 311
+ + TV WN I+ + Y EE +
Sbjct: 472 WASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIE 531
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG-SDIVANTGLVDFY 370
++ M S + D++T ++ +C++L L H + + F +D L+D Y
Sbjct: 532 LFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMY 591
Query: 371 SKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
K G + VF+ KN+I+W ALI+ G HG G++A+E F++ L P+ V+F+
Sbjct: 592 GKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFI 651
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPV 490
++L+AC + G+ + G +F M +D+ V+P HY C ++LL R G L EA LIR P
Sbjct: 652 SILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPF 710
Query: 491 EPTKNMWVALLTACR 505
+W L C
Sbjct: 711 PADAPVWRTFLDGCN 725
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 234/523 (44%), Gaps = 82/523 (15%)
Query: 103 KEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMN 162
KE M F EL GA + S++ ++ ++ + K++ G + ++ ++N
Sbjct: 197 KECMFFFR--ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 163 RVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDG 222
++ + +CG A ++F D D VSW +I S N +A + F+ M E
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 223 RSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVF 282
T+ +++ S+ + L+ GRQIH +K G + ALID Y+KCG++ED++ F
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 283 DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLE 342
D + +K+ V WN+++SGYA + LS++L+M G + ++T S ++ C +
Sbjct: 375 DYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VT 429
Query: 343 HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD------------------ 384
+Q H+ +VR G+ + + L+ Y+K M DA + D
Sbjct: 430 ELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIY 489
Query: 385 --------------RMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+ + + +SWN IA E+ IE+F+ ML+ + P+ TF+
Sbjct: 490 SRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFV 549
Query: 431 AVLSAC----------SYSGL-------------------------SERGWEIFYSMSRD 455
++LS C S GL S R + +R+
Sbjct: 550 SILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE 609
Query: 456 HKVKPRAMHYACM-IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLV--- 511
+ +C+ I G+E L E F S +P + ++++LTACR HG +V
Sbjct: 610 KNLITWTALISCLGIHGYGQEAL--EKFKETLSLGFKPDRVSFISILTACR-HGGMVKEG 666
Query: 512 LGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTL 554
+G F K YG+EP ++ Y +++ + +G L EA +++ +
Sbjct: 667 MGLFQKMKDYGVEP-EMDHYRCAVDLLARNGYLKEAEHLIREM 708
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 161/324 (49%), Gaps = 10/324 (3%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNG-FEPDLYMMNRVLHMHVRCGLMLDARKLFA 182
ST L++ C L +R ++ G + G F D ++ +L ++ R L+ A ++F
Sbjct: 116 STVSGLLS-CASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFE 173
Query: 183 DMPERDAVSWMTLISGLVDSGNYAEA---FEQFLCMWEEFNDGRSRTFATMVRASAGLGL 239
DMP + +W ++S L G E F + + M + +F +++ + +
Sbjct: 174 DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES---SFLGVLKGVSCVKD 230
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
+++ +Q+H A K+G+ + V +LI Y KCG+ A+ +F V WN+II
Sbjct: 231 LDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICA 290
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
A +AL +++ M + G +Q T V+ + + + L +Q H L+++G +
Sbjct: 291 TAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETG 350
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLR 419
IV L+DFY+K G +ED+R FD + KN++ WNAL++GY N G + +F QML+
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQ 409
Query: 420 ERVIPNHVTFLAVLSACSYSGLSE 443
P TF L +C + L +
Sbjct: 410 MGFRPTEYTFSTALKSCCVTELQQ 433
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 156/332 (46%), Gaps = 21/332 (6%)
Query: 128 ALVNVCVGLRSIRGVKRVFGYMI---SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+L+NVC S K + I S +P +Y+ N ++ ++ + G + A K+F M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQP-VYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL----- 239
PER+ VS+ T+I G G+ +A W F++ R F + S GL
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKA-------WGVFSE--MRYFGYLPNQSTVSGLLSCAS 126
Query: 240 --IEVGRQIHSCALKRGVG-EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSI 296
+ G Q+H +LK G+ D+FV L+ +Y + +E A+ VF+ MP KS WN +
Sbjct: 127 LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHM 186
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
+S RG+ +E + + E+ GA + + + V++ + + L+ +KQ H + + G
Sbjct: 187 MSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGL 246
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQ 416
+I L+ Y K G A +F +++SWNA+I +A+++F
Sbjct: 247 DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS 306
Query: 417 MLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
M PN T+++VL S L G +I
Sbjct: 307 MPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 192/392 (48%), Gaps = 20/392 (5%)
Query: 308 EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLV 367
EAL + + D G +D + + ++C + +LE A+ H + D + ++
Sbjct: 95 EALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVI 150
Query: 368 DFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHV 427
+ YS +DA +VF+ M ++N +W +I +G+GE+AI+MF + + E P+
Sbjct: 151 EMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKE 210
Query: 428 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
F AV AC G G F SM RD+ + Y +IE+L G LDEA +
Sbjct: 211 IFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVER 270
Query: 488 APVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEA 547
VEP+ MW L+ C + G L LG AE + ++ ++S S+ L+ A
Sbjct: 271 MTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSK--------ESNAGLVAA 322
Query: 548 AGVLKTLKRKGLTMLPTCSWI--EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHG 605
+++ L L C I + KK+ + F GD SH T ++ + M +I G
Sbjct: 323 KASDSAMEK--LKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFRSLKVQMLDI---G 377
Query: 606 YIEEHEMLLPDVDEEEQRI-LKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHNAIK 664
++ + V+EEE+ L + S L A+ +IN+ PL + Q R C + HN K
Sbjct: 378 FVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFK 437
Query: 665 LIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
+I+++TGR ++ RD ++H ++NG CSC DYW
Sbjct: 438 MISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 97 ALCNRYK--EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGF 154
ALC + K EA+++ +ILE +G D L +C + ++ + ++ +
Sbjct: 86 ALCKQVKIREALEVIDILEDKGYIVDF--PRLLGLAKLCGEVEALEEAR-----VVHDCI 138
Query: 155 EP-DLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFL 213
P D + V+ M+ C DA +F +MP+R++ +W T+I L +G A + F
Sbjct: 139 TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFT 198
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG-----EDSFVACALIDM 268
EE N F + A +G I G +H ++ R G ED +I+M
Sbjct: 199 RFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMVLSMEDYV---NVIEM 254
Query: 269 YSKCGSIEDAQCVFDQMP-EKSTVGWNSIISGYALRGYSE 307
+ CG +++A ++M E S W ++++ ++GY E
Sbjct: 255 LAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISG 299
+E R +H C D+ +I+MYS C S +DA VF++MP++++ W ++I
Sbjct: 128 LEEARVVHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR-HGFGS 358
A G E A+ ++ + G K D+ V C + + ++ R +G
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVL 243
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALI 398
+ +++ + G +++A +RM + +V W L+
Sbjct: 244 SMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLM 284
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 176/346 (50%), Gaps = 17/346 (4%)
Query: 240 IEVGRQIHSCALKRG-VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIIS 298
+ VGR +H K G + E + L+ Y+K G + A+ VFD+MPE+++V WN++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 299 GYAL---RGYSEEALSIYLEMR----DSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
GY +G ++ L R SG + T+ V+ ++ LE H +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 352 VRHGFGS--DIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQ 409
+ GF D+ T LVD YSK G + +A VF+ M KNV +W ++ G +G+G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 469
+ +M + PN +TF ++LSA + GL E G E+F SM V P HY C++
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 470 ELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM--EPGK 527
+LLG+ G + EA+ I + P++P + +L AC ++G V+G+ + L + E K
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 528 LSS-----YVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
LS YV L N+ + GK +E + K +K + + P S++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 137 RSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLI 196
R + G+ + G++ +E +L + +LH + + G + ARK+F +MPER +V+W +I
Sbjct: 131 RIVHGMVKKLGFL----YESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 197 SGLV---DSGNYAE-----AFEQFLCMWEEFNDGRSRTFATMV---RASAGLGLIEVGRQ 245
G D GN+ F +F C G T TMV A + GL+E+G
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCC----GSGVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 246 IHSCALKRGVGE--DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALR 303
+H K G D F+ AL+DMYSKCG + +A VF+ M K+ W S+ +G AL
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALN 301
Query: 304 GYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL-VRHGFGSDIVA 362
G E ++ M +SG K ++ T + ++ + +E + ++ R G I
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 363 NTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAG---YGNHGQGEQAIEMFEQML 418
+VD K GR+++A M ++ + I +L YG GE+ + ++
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIE 421
Query: 419 RE 420
RE
Sbjct: 422 RE 423
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 177/353 (50%), Gaps = 36/353 (10%)
Query: 252 KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWN----------------- 294
K G +V AL+ MY G++ DA VFD+MPE++ V WN
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 295 --------------SIISGYALRGYSEEALSIYLEMRDSGA-KIDQFTISIVIRICARLA 339
+II GYA +EA+ ++ M A K ++ TI ++ L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 340 SLEHAKQAHAALVRHGF-GSDIVANTGLVDFYSKWGRMEDARHVFDRML--RKNVISWNA 396
L+ HA + + GF DI L+D Y+K G ++ A F + RKN++SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW-EIFYSMSRD 455
+I+ + HG G++A+ MF+ M R + PN VT ++VL+ACS+ GL+E + E F +M +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 456 HKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKF 515
+K+ P HY C++++L R+G L+EA + P+E +W LL AC ++ + L +
Sbjct: 391 YKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAER 450
Query: 516 AAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
KL +E YV++ N++ +G+ ++A K + +G+ LP S +
Sbjct: 451 VTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 142/296 (47%), Gaps = 38/296 (12%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF--- 209
GFE +Y+ ++ M++ G M+DA K+F +MPER+ V+W +I+GL + G++ +A
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 210 ----EQFLCMWEEFNDGRSRT---------FATMVRASA----------------GLGLI 240
+ + W DG +R F+ MV A LG +
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 241 EVGRQIHSCALKRG-VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE--KSTVGWNSII 297
++ +H+ KRG V D V +LID Y+KCG I+ A F ++P K+ V W ++I
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR--LASLEHAKQAHAALVRHG 355
S +A+ G +EA+S++ +M G K ++ T+ V+ C+ LA E + + + +
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHV-FDRMLRKNVISWNALIAGYGNHGQGEQA 410
D+ LVD + GR+E+A + + + + + W L+ + E A
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 46/261 (17%)
Query: 323 IDQFTISIVIRICA--RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
D FT +++ + R SL H ++ GF S + T LV Y G M DA
Sbjct: 119 FDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAH 178
Query: 381 HVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI----------------- 423
VFD M +N ++WN +I G N G E+A+ E+M V+
Sbjct: 179 KVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKE 238
Query: 424 ---------------PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
PN +T LA+L A G + + + + V +
Sbjct: 239 AILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSL 298
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNM--WVALLTACRMHGNLVLGK-----FAAEKLY 521
I+ + G + AF P KN+ W +++A +HG +GK F +
Sbjct: 299 IDAYAKCGCIQSAFKFFIEIP-NGRKNLVSWTTMISAFAIHG---MGKEAVSMFKDMERL 354
Query: 522 GMEPGKLSSYVMLLNMYSSSG 542
G++P ++ + + +LN S G
Sbjct: 355 GLKPNRV-TMISVLNACSHGG 374
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 199/401 (49%), Gaps = 27/401 (6%)
Query: 302 LRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIV 361
++G EA+ + + + G +D + + ++C + +LE A+ H ++ D+
Sbjct: 96 IQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVG 155
Query: 362 ANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
A +++ YS ++DA VF+ M N + ++ + N+G GE+AI++F + E
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEG 215
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
PN F V S C+ +G + G F +M R++ + P HY + ++L G LDEA
Sbjct: 216 NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEA 275
Query: 482 FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSS 541
+ P+EP+ ++W L+ R+HG++ LG AE + ++ +L
Sbjct: 276 LNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDK----------- 324
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSWIEVKKQPY---AFLCGDKSHTQTKEIYQKVDNLM 598
+ +AG++ T + P+ + +PY F D SH Q IY+ + +L
Sbjct: 325 ---VSSAGLVATKASDFVKKEPS-----TRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 376
Query: 599 DEISRHGYIEE---HEMLLPDVDEEEQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRV 655
++ GY+ + + L+ ++ +EQ I Y E + + L+ + + + + R+
Sbjct: 377 SQLKEMGYVPDTRYYRSLIMAMENKEQ-IFGYREE-IAVVESLLKSKPRSAITLLTNIRI 434
Query: 656 CGNCHNAIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
G+CH+ +KL++++TGR+++ RDA +H F+NG C C + W
Sbjct: 435 VGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 17/227 (7%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNS---- 295
+E R +H C + D A+I+MYS C S++DA VF++MPE WNS
Sbjct: 135 LEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLC 189
Query: 296 -IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR- 353
++ + GY EEA+ ++ ++ G K + + V C ++ A+ R
Sbjct: 190 VMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYRE 249
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRKNVISWNALIAGYGNHGQ---GEQ 409
+G + + + G +++A + +RM + +V W L+ HG G++
Sbjct: 250 YGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDR 309
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSY--SGLSERGWEIFYSMSR 454
E+ E++ R+ L A + S R FYS R
Sbjct: 310 CAELVEKLDATRLDKVSSAGLVATKASDFVKKEPSTRSEPYFYSTFR 356
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 194/392 (49%), Gaps = 2/392 (0%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMI 150
+ I LA R EA+ LF + + + ++ V +++++ K V +++
Sbjct: 285 AMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 151 -SNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAF 209
S + ++ + ++ ++ +CG M R++F +R+A+SW L+SG +G + +A
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
+ M +E T AT++ A L I+ G++IH ALK + + +L+ MY
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMY 463
Query: 270 SKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTIS 329
SKCG E +FD++ +++ W ++I Y + ++ M S + D T+
Sbjct: 464 SKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMG 523
Query: 330 IVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK 389
V+ +C+ L +L+ K+ H +++ F S + ++ Y K G + A FD + K
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVK 583
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
++W A+I YG + AI FEQM+ PN TF AVLS CS +G + + F
Sbjct: 584 GSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFF 643
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
M R + ++P HY+ +IELL R G ++EA
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 200/408 (49%), Gaps = 11/408 (2%)
Query: 47 SQIRCSSSMEQGLRPKPKKIGHVERKV-PVLEDAHVMKPSTSGLCSQIEKLALCNRYKEA 105
S IR S + P K ER P H P + I+ A N + A
Sbjct: 38 SPIRPSRTRRPSTSPAKKPKPFRERDAFPSSLPLHSKNPYI--IHRDIQIFARQNNLEVA 95
Query: 106 MDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVL 165
+ + + LE G V +T+ AL+ CV +S+ K+V ++ NG E + ++ +++
Sbjct: 96 LTILDYLEQRG--IPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLV 153
Query: 166 HMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGN--YAEAFEQFLCMWEEFNDGR 223
HM+ CG + DA+K+F + + SW L+ G V SG Y + F M E D
Sbjct: 154 HMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLN 213
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
+ + + ++ AG + G + H+ A+K G+ F+ +L+DMY KCG + A+ VFD
Sbjct: 214 VYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 284 QMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI--DQFTISIVIRICARLASL 341
++ E+ V W ++I+G A EAL ++ M S KI + ++ ++ + + +L
Sbjct: 274 EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVKAL 332
Query: 342 EHAKQAHAALVR-HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAG 400
+ K+ HA +++ + ++GL+D Y K G M R VF ++N ISW AL++G
Sbjct: 333 KLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSG 392
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
Y +G+ +QA+ M +E P+ VT VL C+ ++G EI
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 33/387 (8%)
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVD 201
+K++ +I + D ++ +++ + G A +F + +W +I L
Sbjct: 36 LKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+ EA F+ M + TF +++A I +G Q+H A+K G D F
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVF 155
Query: 261 VACALIDMYSKCG-------------------------------SIEDAQCVFDQMPEKS 289
L+D+Y KCG ++ A+ VF+QMP ++
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRN 215
Query: 290 TVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHA 349
V W ++I+ Y +EA ++ M+ K ++FTI +++ +L SL + H
Sbjct: 216 VVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHD 275
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQ 409
++GF D T L+D YSK G ++DAR VFD M K++ +WN++I G HG GE+
Sbjct: 276 YAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEE 335
Query: 410 AIEMF-EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
A+ +F E V P+ +TF+ VLSAC+ +G + G F M + + + P H ACM
Sbjct: 336 ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKN 495
I+LL + +++A L+ S +P N
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDPDFN 422
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 142/295 (48%), Gaps = 33/295 (11%)
Query: 80 HVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSI 139
+ PST I L++ ++ +EA+ LF IL + + T+ ++ C+ SI
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLF-ILMMISHQSQFDKFTFPFVIKACLASSSI 135
Query: 140 RGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL 199
R +V G I GF D++ N ++ ++ +CG RK+F MP R VSW T++ GL
Sbjct: 136 RLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGL 195
Query: 200 V-----DSGNYA--------------------------EAFEQFLCMWEEFNDGRSRTFA 228
V DS EAF+ F M + T
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK 288
+++AS LG + +GR +H A K G D F+ ALIDMYSKCGS++DA+ VFD M K
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGK 315
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGA-KIDQFTISIVIRICARLASLE 342
S WNS+I+ + G EEALS++ EM + + + D T V+ CA +++
Sbjct: 316 SLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 226/510 (44%), Gaps = 55/510 (10%)
Query: 76 LEDAHVM-----KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALV 130
LEDAH + P S + R++E + LF LEL ++ A +
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLF--LELHRSDVFPNEFSFTAAL 163
Query: 131 NVCVGLRSIRGVKRVFGYMISNGFEP-DLYMMNRVLHMHVRCGLMLDARKLFADMPERDA 189
C L + ++ G E ++ + N ++ M+ +CG M DA +F M E+D
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 190 VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSC 249
VSW +++ +G L +W F M
Sbjct: 224 VSWNAIVASCSRNGKLE------LGLW---------FFHQMPNP---------------- 252
Query: 250 ALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEA 309
D+ LID + K G +A V MP ++ WN+I++GY S EA
Sbjct: 253 --------DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
+ +M SG + D++++SIV+ A LA + HA + G S +V + L+D
Sbjct: 305 TEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDM 364
Query: 370 YSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVI-PNHVT 428
YSK G ++ A +F M RKN+I WN +I+GY +G +AI++F Q+ +ER + P+ T
Sbjct: 365 YSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFT 424
Query: 429 FLAVLSACSYSGLS-ERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
FL +L+ CS+ + E F M ++++KP H +I +G+ G + +A +I+
Sbjct: 425 FLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQE 484
Query: 488 APVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSS----YVMLLNMYSSSGK 543
W ALL AC +L K A K+ +E G Y+++ N+Y+ +
Sbjct: 485 FGFGYDGVAWRALLGACSARKDLKAAKTVAAKM--IELGDADKDEYLYIVMSNLYAYHER 542
Query: 544 LMEAAGVLKTLKRKGLTMLPTCSWIEVKKQ 573
E + K ++ G+ SWI+ + +
Sbjct: 543 WREVGQIRKIMRESGVLKEVGSSWIDSRTK 572
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 129/266 (48%), Gaps = 12/266 (4%)
Query: 191 SWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV---RASAGLGLIEVGRQIH 247
SW T++ L G+ E NDG + +V R S G + + RQ+H
Sbjct: 23 SWSTIVPALARFGSIG----VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 248 SCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSE 307
K G ++ ++ +L+ Y S+EDA VFD+MP+ + WNS++SGY G +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 308 EALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF-GSDIVANTGL 366
E + ++LE+ S ++F+ + + CARL H+ LV+ G ++V L
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 367 VDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNH 426
+D Y K G M+DA VF M K+ +SWNA++A +G+ E + F QM P+
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDT 254
Query: 427 VTFLAVLSACSYSGLSERGWEIFYSM 452
VT+ ++ A SG +++ M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 144/340 (42%), Gaps = 42/340 (12%)
Query: 79 AHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRS 138
+HV ++S S I + R+ L +EL DG S L+ V
Sbjct: 13 SHVGSTASSNSWSTI--VPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGY 70
Query: 139 IRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISG 198
+ +++ GY+ +GF + + N ++ + + DA K+F +MP+ D +SW +L+SG
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSG 130
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE- 257
V SG + E FL + +F + A A L L +G IHS +K G+ +
Sbjct: 131 YVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKG 190
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMR 317
+ V LIDMY KCG ++DA VF M EK TV WN+I++ + G E L + +M
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 318 DSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRME 377
+ D V L+D + K G
Sbjct: 251 N---------------------------------------PDTVTYNELIDAFVKSGDFN 271
Query: 378 DARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQM 417
+A V M N SWN ++ GY N + +A E F +M
Sbjct: 272 NAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 289 STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAH 348
S+ W++I+ A G S L +E+ + G K D + ++R+ + +Q H
Sbjct: 20 SSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 349 AALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGE 408
+ +HGF S+ + L+ FY +EDA VFD M +VISWN+L++GY G+ +
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+ I +F ++ R V PN +F A L+AC+ LS G I + + K + C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL 528
I++ G+ G +D+A + + + T + W A++ +C +G L LG + + M
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELGLWF---FHQMPNPDT 254
Query: 529 SSYVMLLNMYSSSGKLMEAAGVLKTL 554
+Y L++ + SG A VL +
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDM 280
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 198/439 (45%), Gaps = 79/439 (17%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQF 212
GF D Y+ N ++ M+V+ + ARK+F + +R W +ISG GN EA + F
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
M E ND S T +I ++K
Sbjct: 191 DMMPE--NDVVSWT-------------------------------------VMITGFAKV 211
Query: 273 GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
+E+A+ FD+MPEKS V WN+++SGYA G++E+AL ++ +M G + ++ T IVI
Sbjct: 212 KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVI 271
Query: 333 RICA--------------------------RLASLE-HAKQAHAALVRHGFGS-----DI 360
C+ + A L+ HAK R F ++
Sbjct: 272 SACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNL 331
Query: 361 VANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRE 420
V ++ Y++ G M AR +FD M ++NV+SWN+LIAGY ++GQ AIE FE M+
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDY 391
Query: 421 -RVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD 479
P+ VT ++VLSAC + E G + R +++K Y +I + R G L
Sbjct: 392 GDSKPDEVTMISVLSACGHMADLELG-DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 480 EA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLN 536
EA F ++ V ++ A A G L + K G+EP ++ +Y +L
Sbjct: 451 EAKRVFDEMKERDVVSYNTLFTAF--AANGDGVETLNLLSKMKDEGIEPDRV-TYTSVLT 507
Query: 537 MYSSSGKLMEAAGVLKTLK 555
+ +G L E + K+++
Sbjct: 508 ACNRAGLLKEGQRIFKSIR 526
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 52/333 (15%)
Query: 176 DARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASA 235
+ARK F MPE+ VSW ++SG +G +A F M T+ ++ A +
Sbjct: 216 NARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 236 GLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC----------------------- 272
+ R + ++ V + FV AL+DM++KC
Sbjct: 276 FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWN 335
Query: 273 ---------GSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG-AK 322
G + A+ +FD MP+++ V WNS+I+GYA G + A+ + +M D G +K
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 323 IDQFTISIVIRICARLASLE-------HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
D+ T+ V+ C +A LE + ++ L G+ S L+ Y++ G
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS-------LIFMYARGGN 448
Query: 376 MEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
+ +A+ VFD M ++V+S+N L + +G G + + + +M E + P+ VT+ +VL+A
Sbjct: 449 LWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
C+ +GL + G IF S+ P A HYACM
Sbjct: 509 CNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 155/299 (51%), Gaps = 9/299 (3%)
Query: 140 RGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL 199
RG + +++ + P + +NR+L MHV CG + R++F MP RD SW + G
Sbjct: 105 RGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGC 164
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGR----SRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
++ G+Y +A F+ M + G S +++A A + E+G+Q+H+ K G
Sbjct: 165 IEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 256 --GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIY 313
EDS+++ +LI Y + +EDA V Q+ +TV W + ++ G +E + +
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 314 LEMRDSGAKIDQFTISIVIRICARLAS-LEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+EM + G K + S V++ C+ ++ +Q HA ++ GF SD + L++ Y K
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 373 WGRMEDARHVFDRMLRKNVIS-WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+G+++DA VF + +S WNA++A Y +G +AI++ QM + I H T L
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM-KATGIKAHDTLL 402
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 128/278 (46%), Gaps = 9/278 (3%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM----RDSG 320
L+ M+ CG ++ + +FD+MP + W + G G E+A +++ M +
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF--GSDIVANTGLVDFYSKWGRMED 378
KI + + V++ CA + E KQ HA + GF D + L+ FY ++ +ED
Sbjct: 189 FKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLED 248
Query: 379 ARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSY 438
A V ++ N ++W A + G+ ++ I F +M + N F VL ACS+
Sbjct: 249 ANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSW 308
Query: 439 SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWV 498
R + ++ + + + +IE+ G+ G + +A + +S+ E + + W
Sbjct: 309 VSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWN 368
Query: 499 ALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLN 536
A++ + +G + A + LY M+ + ++ LLN
Sbjct: 369 AMVASYMQNGIYIE---AIKLLYQMKATGIKAHDTLLN 403
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
Query: 547 AAGVLKTLKRKGLTML---PTCSWIEVKKQPYAFLCGDKSH-TQTKEIYQKVDNLMDEIS 602
+ V++ RK T+ P+ +V+ G+K + Y K+ +L E+
Sbjct: 85 SGSVVRNTVRKDTTLRHISPSSHSTKVRGDKPEISGGEKKAIVDRSKAYVKLKSLGKEVR 144
Query: 603 RHGYIEEHEMLLPDVDEE-EQRILKYHSEMLGIAYGLINTPDWTPLQITQGHRVCGNCHN 661
GY+ E + +L D+DEE +++ L +HSE L IA+G+INTP T +++ + R+CG+CHN
Sbjct: 145 DAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHN 204
Query: 662 AIKLIAMVTGREIVVRDASRFHHFRNGTCSCGDYW 696
IK+++ + REI+VRD RFHHFR+G CSCGDYW
Sbjct: 205 FIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/469 (23%), Positives = 205/469 (43%), Gaps = 27/469 (5%)
Query: 32 RYCFASKVRYWRYPFSQIRCSSSMEQGLRPKPKKIGHVERKVPVLEDAHVM--KPSTSGL 89
R+C + Y R R S L K ++ + +L++ + KP+
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 90 CSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYM 149
I L + EA ++ + ++ EG G DV TY L++ R + K VF M
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDV--VTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 150 ISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNY 205
+ +PD +L + ++ +++M + D V++ L+ L +GN+
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL-----KRGVGEDSF 260
EAF+ M ++ T+ T++ GL+ V R + L GV ++
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLI-----CGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEM 316
ID Y K G A F++M K + V N+ + A G EA I+ +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 317 RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRM 376
+D G D T +++++ +++ ++ A + + ++ +G D++ L++ K R+
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 377 EDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAV 432
++A +F RM L+ V+++N L+AG G +G+ ++AIE+FE M+++ PN +TF +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 433 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
+ ++ + M D P Y +I L + G + EA
Sbjct: 615 FDCLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 199/452 (44%), Gaps = 37/452 (8%)
Query: 52 SSSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEI 111
S S++ GL+ P + + R+ + +A+ S +GL + K C EAM+++
Sbjct: 162 SLSVKGGLKQAPYALRKM-REFGFVLNAY----SYNGLIHLLLKSRFCT---EAMEVYRR 213
Query: 112 LELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGY---MISNGFEPDLYMMNRVLHMH 168
+ LEG + TY +L+ VGL R + V G M + G +P++Y + +
Sbjct: 214 MILEGFRPSL--QTYSSLM---VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 169 VRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRS 224
R G + +A ++ M + D V++ LI L + A E F E+ GR
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF----EKMKTGRH 324
Query: 225 R----TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
+ T+ T++ + ++ +Q S K G D L+D K G+ +A
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 281 VFDQMPEKSTV----GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
D M ++ + +N++I G ++AL ++ M G K +T + I
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF----DRMLRKNVI 392
+ A + + G +IVA + +K GR +A+ +F D L + +
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
++N ++ Y G+ ++AI++ +M+ P+ + ++++ + + W++F M
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 453 SRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
++ K+KP + Y ++ LG+ G + EA L
Sbjct: 565 -KEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 148/341 (43%), Gaps = 47/341 (13%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY+ L+ + I + VF + S G PD+ N +L + + G + + +L+ +M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 185 P----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
E + ++ +ISGLV +GN +A + + + +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD---------------------- 884
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE----KSTVGWNSI 296
R A G LID SK G + +A+ +F+ M + + +N +
Sbjct: 885 ---RDFSPTACTYG---------PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
I+G+ G ++ A +++ M G + D T S+++ + ++ L G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRM-----LRKNVISWNALIAGYGNHGQGEQAI 411
D+V +++ K R+E+A +F+ M + ++ ++N+LI G G E+A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 412 EMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
+++ ++ R + PN TF A++ S SG E + ++ +M
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 125/276 (45%), Gaps = 11/276 (3%)
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
++S++ G R + + + EM G K + +T +I IR+ R + A + +
Sbjct: 226 YSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 285
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML----RKNVISWNALIAGYGNHGQGE 408
G G D+V T L+D +++ A+ VF++M + + +++ L+ + ++ +
Sbjct: 286 DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD 345
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+ + +M ++ +P+ VTF ++ A +G ++ M RD + P Y +
Sbjct: 346 SVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM-RDQGILPNLHTYNTL 404
Query: 469 IELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLV--LGKFAAEKLYGM 523
I L R LD+A L + S V+PT ++ + G+ V L F K G+
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 524 EPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
P ++ L ++ + +G+ EA + LK GL
Sbjct: 465 APNIVACNASLYSL-AKAGRDREAKQIFYGLKDIGL 499
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 13/229 (5%)
Query: 146 FGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE----RDAVSWMTLISGLVD 201
+ M F P ++ + G + +A++LF M + + + LI+G
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
+G A F M +E +T++ +V +G ++ G + G+ D
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 262 ACALIDMYSKCGSIEDAQCVFDQMPEKSTVG-----WNSIISGYALRGYSEEALSIYLEM 316
+I+ K +E+A +F++M + +NS+I + G EEA IY E+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Query: 317 RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTG 365
+ +G + + FT + +IR + EHA + +V GF NTG
Sbjct: 1059 QRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFS----PNTG 1103
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 200/437 (45%), Gaps = 14/437 (3%)
Query: 66 IGHVERKVPVLED--AHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGG 123
+ ++ + +L D H P++ + I L+ CNR EA+ L E + L G D
Sbjct: 230 VNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPD-AE 288
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
+ D ++ +C I ++ M+ GF PD +++ + G + A+ LF
Sbjct: 289 TFNDVILGLC-KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-TFATMVRASAGLGLIEV 242
+P+ + V + TLI G V G +A M + T+ +++ GL+ +
Sbjct: 348 IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGL 407
Query: 243 GRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSIIS 298
++ +G + + L+D + K G I++A V ++M + +TVG+N +IS
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
+ EA+ I+ EM G K D +T + +I + ++HA ++ G +
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMF 414
+ V L++ + + G +++AR + + M+ + + I++N+LI G G+ ++A +F
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587
Query: 415 EQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGR 474
E+MLR+ P++++ +++ SG+ E E M P + + +I L R
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCR 646
Query: 475 EGLLDEAFALIRSAPVE 491
G +++ + R E
Sbjct: 647 AGRIEDGLTMFRKLQAE 663
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 164/405 (40%), Gaps = 32/405 (7%)
Query: 173 LMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVR 232
LML+ R +++ P S+ ++ LV + A F M TF +++
Sbjct: 168 LMLEMRNVYSCEPTFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 233 ASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM------P 286
A + I+ + K G +S + LI SKC + +A + ++M P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 287 EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQ 346
+ T +N +I G EA + M G D T ++ ++ ++ AK
Sbjct: 286 DAET--FNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 347 AHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-----NVISWNALIAGY 401
+ + +IV L+ + GR++DA+ V M+ +V ++N+LI GY
Sbjct: 344 LFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
G A+E+ M + PN ++ ++ G + + + MS D +KP
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPN 458
Query: 462 AMHYACMIELLGREGLLDEAFALIRSAP---VEPTKNMWVALLTA-CRM----HGNLVLG 513
+ + C+I +E + EA + R P +P + +L++ C + H +L
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
+E + +Y L+N + G++ EA ++ + +G
Sbjct: 519 DMISEGVV----ANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 22/304 (7%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGN 204
M + G +P++Y ++ + G + +A + +M + + V + LIS
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKR-----GVGEDS 259
EA E F M + TF +++ GL EV H+ L R GV ++
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLIS-----GLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKST----VGWNSIISGYALRGYSEEALSIYLE 315
LI+ + + G I++A+ + ++M + + + +NS+I G G ++A S++ +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G + +I+I R +E A + +V G DIV L++ + GR
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 376 MEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ED +F ++ + + +++N L++ G A + ++ + + +PNH T+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 432 VLSA 435
+L +
Sbjct: 710 LLQS 713
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
A +++ +M FT +V++ + ++ A + +HG + V L+
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 369 FYSKWGRMEDARHVFDRMLRKNVI----SWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
SK R+ +A + + M + ++N +I G + +A +M +ML P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFA- 483
+ +T+ +++ G + ++FY + KP + + +I G LD+A A
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 484 ---LIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME----PGKLSSYVMLLN 536
++ S + P + +L+ G L A E L+ M + SY +L++
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEG---LVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 537 MYSSSGKLMEAAGVLKTLKRKGL 559
+ GK+ EA VL + GL
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGL 455
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 144/314 (45%), Gaps = 22/314 (7%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQM----PEKSTVGWNSIISGYALRGYS-EEALSIYLEMRD 318
++ YS+ G E A +F++M P + V +N I+ + G S + L + EMR
Sbjct: 215 TILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRS 274
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
G K D+FT S V+ CAR L AK+ A L G+ V L+ + K G +
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTE 334
Query: 379 ARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
A V M + +++N L+A Y G ++A + E M ++ V+PN +T+ V+
Sbjct: 335 ALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Query: 435 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI---RSAPVE 491
A +G + ++FYSM ++ P Y ++ LLG++ +E ++ +S
Sbjct: 395 AYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAE-----KLYGMEPGKLSSYVMLLNMYSSSGKLME 546
P + W +L C GN + KF K G EP + ++ L++ Y G ++
Sbjct: 454 PNRATWNTMLALC---GNKGMDKFVNRVFREMKSCGFEPDR-DTFNTLISAYGRCGSEVD 509
Query: 547 AAGVLKTLKRKGLT 560
A+ + + R G
Sbjct: 510 ASKMYGEMTRAGFN 523
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 207/483 (42%), Gaps = 34/483 (7%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGL-RSIRGVKRVFGYMISNGFEPDLY 159
+Y++A+DLFE ++ G + TY+ +++V + RS R + V M S G + D +
Sbjct: 225 KYEKAIDLFERMKEMGPSPTL--VTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEF 282
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGNYAEAFEQFLCM 215
+ VL R GL+ +A++ FA++ E V++ L+ +G Y EA M
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
E S T+ +V A G + + K+GV ++ +ID Y K G
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 276 EDAQCVFDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
++A +F M E +T +N+++S + S E + + +M+ +G ++ T + +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN- 390
+ +C + + + GF D L+ Y + G DA ++ M R
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGF 522
Query: 391 ---VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
V ++NAL+ G + M + P ++ +++ C G + G E
Sbjct: 523 NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY-SLMLQCYAKGGNYLGIE 581
Query: 448 IFYSMSRDHKVKPRAM--------HYACMIELLGREGLLDEAFALIRSAPVEPTK---NM 496
+ ++ ++ P M ++ C L G E AF L + +P N
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCR-ALAGSE----RAFTLFKKHGYKPDMVIFNS 636
Query: 497 WVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
+++ T M+ + G + + G+ P L +Y L++MY G+ +A +LKTL++
Sbjct: 637 MLSIFTRNNMY-DQAEGILESIREDGLSP-DLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 557 KGL 559
L
Sbjct: 695 SQL 697
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/408 (18%), Positives = 166/408 (40%), Gaps = 47/408 (11%)
Query: 90 CSQIEKLALCNRYKEAMDLFEIL-ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGY 148
C+ L+L + + ++ ++L +++ +G +T++ ++ +C + V RVF
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEA 208
M S GFEPD N ++ + RCG +DA K++ +M + +T
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT-------------- 527
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
T+ ++ A A G G + S +G ++
Sbjct: 528 -----------------TYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Query: 269 YSKCGSIEDAQCVFDQMPEKSTV-GW----NSIISGYALRGY--SEEALSIYLEMRDSGA 321
Y+K G+ + + +++ E W +++ + R SE A +++ + G
Sbjct: 571 YAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF---KKHGY 627
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
K D + ++ I R + A+ ++ G D+V L+D Y + G A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 382 VFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
+ + L+ +++S+N +I G+ G ++A+ M +M + P T+ +S +
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
G+ ++ M+++ +P + + +++ R G EA +
Sbjct: 748 AMGMFAEIEDVIECMAKND-CRPNELTFKMVVDGYCRAGKYSEAMDFV 794
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 181/402 (45%), Gaps = 14/402 (3%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I +L N +A+ +E + G A+++ + KR+F +
Sbjct: 203 IRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAG 262
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS-GNYAEAFEQ 211
G+ +Y + ++ + R GL +A +F M E + + ++D+ G F+Q
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 212 FLCMWEEFNDGRSR----TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALID 267
++E + TF +++ + GL E R + R + +D F L+D
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 268 MYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKI 323
K G ++ A + QMP K + V ++++I G+A G +EAL+++ EMR G +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 324 DQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF 383
D+ + + ++ I ++ E A + G D+V L+ Y K G+ ++ + VF
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 384 DRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYS 439
M R+ N+++++ LI GY G ++A+E+F + + + V + A++ A +
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 440 GLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
GL + M+++ + P + Y +I+ GR +D +
Sbjct: 563 GLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRS 603
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 167/400 (41%), Gaps = 48/400 (12%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
LC R + I E G TY+ ++N V R GV+ V M +G
Sbjct: 233 GLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVY 292
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQF 212
+ ++ + V+ G M DA KLF +M ER D + +LIS GN AF
Sbjct: 293 NKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF--- 349
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
+++E + +G+ S+ ALID K
Sbjct: 350 -LLFDELTE-------------------------------KGLSPSSYTYGALIDGVCKV 377
Query: 273 GSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
G + A+ + ++M K + V +N++I GY +G +EA IY M G + D FT
Sbjct: 378 GEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTC 437
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ + RL + AKQ ++ G V+ T L+D Y K G +E+A+ +F M
Sbjct: 438 NTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 389 K----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
K N I++N +I Y G+ ++A ++ M + P+ T+ +++ + +
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 445 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+F M + ++ Y MI L + G DEAF L
Sbjct: 558 AMRLFSEMGL-KGLDQNSVTYTVMISGLSKAGKSDEAFGL 596
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 184/434 (42%), Gaps = 54/434 (12%)
Query: 145 VFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLV 200
+F M+ +G + +Y + V+ R G + ++KL + + +A ++ T+I+ V
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 201 DSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSF 260
+++ M ++ T+ ++ S G + ++ +RG+ D
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 261 VACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEM 316
V +LI + G+++ A +FD++ EK S+ + ++I G G A + EM
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 317 RDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRM 376
+ G I Q + +I R ++ A + + + GF +D+ + +++ R
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 377 EDARHVFDRMLRKNV----ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAV 432
++A+ RM+ V +S+ LI Y G E+A +F +M
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM--------------- 495
Query: 433 LSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRSAP 489
S +G V+P A+ Y MI ++G + EA L + +
Sbjct: 496 ---------SSKG------------VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 490 VEPTKNMWVALLTACRMHGNL--VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEA 547
++P + +L+ + N+ + F+ L G++ ++ Y ++++ S +GK EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT-YTVMISGLSKAGKSDEA 593
Query: 548 AGVLKTLKRKGLTM 561
G+ +KRKG T+
Sbjct: 594 FGLYDEMKRKGYTI 607
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 10/233 (4%)
Query: 110 EIL--ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
EIL E++ G ++ ++ L++ + ++ M GF+ D++ N +
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443
Query: 168 HVRCGLMLDARKLFADMPE----RDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
R +A++ M E VS+ LI GN EA F+ M +
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
+ T+ M+ A G I+ R++ + G+ DS+ +LI ++++A +F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 284 QMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
+M ++++V + +ISG + G S+EA +Y EM+ G ID + +I
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 31/343 (9%)
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE---KSTV-GW 293
G+ E G ++ +K+G+ D + K I+ +F +M + K TV
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR 353
++ G RG E++ + E G K + +T + +I + + + +
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS----WNALIAGYGNHGQGEQ 409
G + V T L++ K G+M DA +FD M + + S + +LI+ G ++
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERG-WEIFYSMSRDHKVKPRAMHYACM 468
A +F+++ + + P+ T+ A++ G E G EI + + V + + +
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVG--EMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 469 IELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYG------ 522
I+ R+G++DEA + V K + T N + F K Y
Sbjct: 406 IDGYCRKGMVDEASMIY---DVMEQKGFQADVFTC-----NTIASCFNRLKRYDEAKQWL 457
Query: 523 ---MEPG-KLS--SYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
ME G KLS SY L+++Y G + EA + + KG+
Sbjct: 458 FRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 215/481 (44%), Gaps = 33/481 (6%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVN-VCVGLRSIRG 141
+P T + + L L R EA++L + + G + T + LVN +C+ +
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL--ITLNTLVNGLCLNGKVSDA 212
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLIS 197
V + M+ GF+P+ VL++ + G A +L M ER DAV + +I
Sbjct: 213 VV-LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
GL G+ AF F M + T+ T++ G + G ++ +KR +
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIY 313
+ LID + K G + +A + +M ++ +T+ +NS+I G+ EEA+ +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
M G D T +I+I + ++ + + G ++ V LV + +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 374 GRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
G++E A+ +F M +R +++S+ L+ G ++G+ E+A+E+F ++ + ++ + +
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 430 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS-- 487
+ ++ + + W++F S+ VK A Y MI L R+ L +A L R
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPL-KGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 488 ----APVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGME----PGKLSSYVMLLNMYS 539
AP E T N+ + R H AAE + M+ P +S+ M++NM S
Sbjct: 571 EEGHAPDELTYNILI------RAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Query: 540 S 540
S
Sbjct: 625 S 625
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 168/384 (43%), Gaps = 13/384 (3%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLH---MHV 169
++E G T ++N R + G ++ G+EPD + N +L+ +
Sbjct: 113 QMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC 172
Query: 170 RCGLMLDARKLFADMPERDA-VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
R L+ +M + ++ TL++GL +G ++A M E T+
Sbjct: 173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK 288
++ G + ++ +R + D+ +ID K GS+++A +F++M K
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 289 ----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
+ +N++I G+ G ++ + +M + T S++I + L A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAG 400
Q +++ G + + L+D + K R+E+A + D M+ K +++++N LI G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
Y + + +E+F +M VI N VT+ ++ SG E ++F M +V+P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV-SRRVRP 471
Query: 461 RAMHYACMIELLGREGLLDEAFAL 484
+ Y +++ L G L++A +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEI 495
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 210/488 (43%), Gaps = 57/488 (11%)
Query: 91 SQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSI-RGVKRVFGYM 149
S I A RY+EA+++F+ ++E DG TY+ ++NV + + + + M
Sbjct: 213 SLISAFANSGRYREAVNVFK--KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 150 ISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGNY 205
S+G PD Y N ++ R L +A ++F +M D V++ L+ S
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 206 AEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACAL 265
EA + + E +G S + T +L
Sbjct: 331 KEAMK---VLNEMVLNGFSPSIVTY--------------------------------NSL 355
Query: 266 IDMYSKCGSIEDAQCVFDQMPEKST----VGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
I Y++ G +++A + +QM EK T + +++SG+ G E A+SI+ EMR++G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
K + T + I++ + + G DIV L+ + + G +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 382 VFDRMLRKNVI----SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
VF M R + ++N LI+ Y G EQA+ ++ +ML V P+ T+ VL+A +
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL--GRE-GLLDEAFALIRSAPVEPTK 494
G+ E+ ++ M D + KP + Y ++ G+E GL+ + S +EP
Sbjct: 536 RGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 495 NMWVALLTACRMHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLK 552
+ L+ C L + F+ K G P +++ ++++Y + +A GVL
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSP-DITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 553 TLKRKGLT 560
+K +G T
Sbjct: 654 YMKERGFT 661
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 196/478 (41%), Gaps = 57/478 (11%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R A ++F L+ +G DV +Y +L++ R VF M +G +P L
Sbjct: 188 RVSSAANMFNGLQEDGFSLDV--YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLIT 245
Query: 161 MNRVLHMHVRCGLMLD-----ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCM 215
N +L++ + G + K+ +D DA ++ TLI+ C
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT---------------CCK 290
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+ ++ F M A G D AL+D+Y K
Sbjct: 291 RGSLHQEAAQVFEEMKAA--------------------GFSYDKVTYNALLDVYGKSHRP 330
Query: 276 EDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
++A V ++M S V +NS+IS YA G +EA+ + +M + G K D FT + +
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----L 387
+ R +E A + G +I + Y G+ + +FD + L
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
++++WN L+A +G +G + +F++M R +P TF ++SA S G E+
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTAC 504
++ M D V P Y ++ L R G+ +++ A + +P + + +LL A
Sbjct: 511 VYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 505 RMHGNLVLGKFAAEKLYG--MEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
+ L AE++Y +EP + ++L + S L EA LK +G +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL-VCSKCDLLPEAERAFSELKERGFS 626
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/512 (19%), Positives = 193/512 (37%), Gaps = 135/512 (26%)
Query: 96 LALCNR---YKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
+ C R ++EA +FE E++ G TY+AL++V + +V M+ N
Sbjct: 286 ITCCKRGSLHQEAAQVFE--EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEA 208
GF P + N ++ + R G++ +A +L M E+ D ++ TL+SG +G
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK---- 399
Query: 209 FEQFLCMWEEFNDGRSR----TFATMVRASAGLG----LIEVGRQIHSCALKRGV----- 255
E + ++EE + + TF ++ G ++++ +I+ C L +
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 256 --------GEDSFVA------------------CALIDMYSKCGSIEDAQCVFDQM---- 285
G DS V+ LI YS+CGS E A V+ +M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 286 --PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT---------------- 327
P+ ST +N++++ A G E++ + EM D K ++ T
Sbjct: 520 VTPDLST--YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 328 -------------------ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
+ ++ +C++ L A++A + L GF DI +V
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 369 FYSKWGRMEDARHVFDRM---------------------------------------LRK 389
Y + + A V D M ++
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
++IS+N +I Y + + A +F +M ++P+ +T+ + + + + E +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEA 481
M + H +P Y +++ + DEA
Sbjct: 758 RYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 172/394 (43%), Gaps = 36/394 (9%)
Query: 64 KKIGHVERKVPVLEDAHVM--KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADV 121
++ G VE + + E+ KP+ + I+ ++ E M +F+ + + G D+
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
T++ L+ V V VF M GF P+ N ++ + RCG A ++
Sbjct: 455 --VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 182 ADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR----TFATMVRA 233
M + D ++ T+++ L G +EQ + E DGR + T+ +++ A
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGG----MWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 234 SAGLGLIEVGRQI---HSCA--LKRGVGEDSFVAC-ALIDMYSKCGSIEDAQCVFDQMPE 287
A G++I HS A + GV E V L+ + SKC + +A+ F ++ E
Sbjct: 569 YAN------GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 288 K----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEH 343
+ NS++S Y R +A + M++ G T + ++ + +R A
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 344 AKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIA 399
+++ ++ G DI++ ++ Y + RM DA +F M + +VI++N I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 400 GYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
Y E+AI + M++ PN T+ +++
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 174/378 (46%), Gaps = 15/378 (3%)
Query: 105 AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRV 164
A+ LF+ +E +G +V TY+ L++ LR I ++ M G EP+L N V
Sbjct: 224 ALTLFDKMETKGCLPNV--VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 165 LHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFN 220
++ R G M + + +M R D V++ TLI G GN+ +A M
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 221 DGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQC 280
T+ +++ + G + + RG+ + L+D +S+ G + +A
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 281 VFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
V +M + S V +N++I+G+ + G E+A+++ +M++ G D + S V+
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNV----I 392
R ++ A + +V G D + + L+ + + R ++A +++ MLR +
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM 452
++ ALI Y G E+A+++ +M+ + V+P+ VT+ +++ + + + +
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 453 SRDHKVKPRAMHYACMIE 470
+ V P + Y +IE
Sbjct: 582 FYEESV-PSDVTYHTLIE 598
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 41/346 (11%)
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCG-SIEDAQCVF 282
S F +V++ + L LI+ I A G A++D + +I A+ VF
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 283 DQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARL 338
+M E + +N +I G+ G + AL+++ +M G + T + +I +L
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 339 ASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISW 394
++ + ++ G ++++ +++ + GRM++ V M R+ + +++
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 395 NALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSR 454
N LI GY G QA+ M +MLR + P+ +T+ +++ + +G R E F R
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME-FLDQMR 372
Query: 455 DHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGK 514
+ P Y +++ ++G ++EA+ ++R M+ N
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR------------------EMNDN----- 409
Query: 515 FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
G P + +Y L+N + +GK+ +A VL+ +K KGL+
Sbjct: 410 -------GFSPS-VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 142/347 (40%), Gaps = 15/347 (4%)
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
T+ ++R G I+V + +G + LID Y K I+D + M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 286 P----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
E + + +N +I+G G +E + EM G +D+ T + +I+ + +
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNAL 397
A HA ++RHG ++ T L+ K G M A D+M L N ++ L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
+ G+ G +A + +M P+ VT+ A+++ +G E + M ++
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKG 445
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIR---SAPVEPTKNMWVALLTA-CRMHGNLVLG 513
+ P + Y+ ++ R +DEA + R ++P + +L+ C
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 514 KFAAEKL-YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
E L G+ P + +Y L+N Y G L +A + + KG+
Sbjct: 506 DLYEEMLRVGLPPDEF-TYTALINAYCMEGDLEKALQLHNEMVEKGV 551
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 189/421 (44%), Gaps = 27/421 (6%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + +A NRY + LFE +++ G + +V CV L S
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN---IVMHCVCLSSQPCRA 137
Query: 144 RVF-GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISG 198
F G M+ GFEPDL +L+ + + DA LF + + + V++ TLI
Sbjct: 138 SCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRC 197
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL-----KR 253
L + + A E F M + T+ +V GL E+GR + L KR
Sbjct: 198 LCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT-----GLCEIGRWGDAAWLLRDMMKR 252
Query: 254 GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEA 309
+ + ALID + K G + +A+ +++ M + S + S+I+G + G +EA
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
++ M +G ++ + +I + +E + + + G ++ + T L+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 370 YSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
Y GR + A+ VF++M + ++ ++N L+ G +G+ E+A+ +FE M + + N
Sbjct: 373 YCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDIN 432
Query: 426 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
VT+ ++ G E +++F S+ +KP + Y MI R GL+ EA +L
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLF-SKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 486 R 486
+
Sbjct: 492 K 492
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 150/342 (43%), Gaps = 14/342 (4%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
NR ++A+ LF+ ++ G G TY L+ R + +F M +NG P++
Sbjct: 167 NRIEDAIALFD--QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCM 215
N ++ G DA L DM +R + +++ LI V G EA E + M
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+ T+ +++ GL++ RQ+ + G + + LI + K +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 276 EDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
ED +F +M +K +T+ + +I GY L G + A ++ +M A D T +++
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-- 389
+ +E A + + +IV T ++ K G++EDA +F + K
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 390 --NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
NVI++ +I+G+ G +A +F++M + +PN +
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 25/303 (8%)
Query: 276 EDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
DA +F +M P S + + ++S A + +S++ +M+ G T +IV
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 332 IRICARLASLE-HAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML--- 387
+ C L+S A +++ GF D+V T L++ Y W R+EDA +FD++L
Sbjct: 125 MH-CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 388 -RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSERG 445
+ NV+++ LI + A+E+F QM PN VT+ A+++ C +
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 446 WEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLT 502
W + M R +++P + + +I+ + G L EA + ++ V P + +L+
Sbjct: 244 WLLRDMMKR--RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 503 ACRMHGNLVLGKFAAEKLYGME-----PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRK 557
M+G L A + Y ME P ++ Y L++ + S ++ + + + +K
Sbjct: 302 GLCMYG---LLDEARQMFYLMERNGCYPNEV-IYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 558 GLT 560
G+
Sbjct: 358 GVV 360
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 136/306 (44%), Gaps = 15/306 (4%)
Query: 266 IDMYSKCGSIED--AQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
I M+ C S + A C +M E V + S+++GY E+A++++ ++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G K + T + +IR + L HA + + +G ++V LV + GR DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 380 ----RHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
R + R + NVI++ ALI + G+ +A E++ M++ V P+ T+ ++++
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI----RSAPVE 491
GL + ++FY M R+ P + Y +I + +++ + + V
Sbjct: 303 LCMYGLLDEARQMFYLMERN-GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
T V + C + V + + P + +Y +LL+ +GK+ +A +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 552 KTLKRK 557
+ ++++
Sbjct: 422 EYMRKR 427
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/457 (22%), Positives = 202/457 (44%), Gaps = 26/457 (5%)
Query: 40 RYWRYPFSQIRCSSSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALC 99
R+W FS R S ++E+ + K I + P+ PS + K+A
Sbjct: 35 RFWGRTFSTKRSSMNLEEEIDLFCKMI----QSRPL--------PSIVDFSKVLSKIAKS 82
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVN-VCVGLRSIRGVKRVFGYMISNGFEPDL 158
Y + LF +E+ G G D+ +Y+ ++N +C R + + V G M+ G+EPD+
Sbjct: 83 KNYDLVISLFHHMEVCGIGHDL--YSYNIVINCLCRCSRFVIALS-VVGKMMKFGYEPDV 139
Query: 159 YMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLC 214
++ +++ + + DA L + M E D V + T+I G G +A E F
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 215 MWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGS 274
M + + T+ ++V G ++ + R + + A+ID++ K G
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 275 IEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
+A ++++M + +NS+I+G + G +EA + M G D T +
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM-LRK 389
+I + ++ + + + G D + ++ Y + GR + A+ +F RM R
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 390 NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIF 449
N+ +++ L+ G + + E+A+ +FE M + + + T+ V+ G E W++F
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 450 YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
S+S +KP + Y MI R+ D++ L R
Sbjct: 440 RSLSC-KGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P + S I NR +A+DL +E G DV Y+ +++ + +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV--VIYNTIIDGSCKIGLVNDA 193
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAV----SWMTLISG 198
+F M +G D N ++ G DA +L DM RD V ++ +I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
V G ++EA + + M D T+ +++ G ++ +Q+ + +G D
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG----WNSIISGYALRGYSEEALSIYL 314
LI+ + K +++ +F +M ++ VG +N+II GY G + A I+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 315 EMRDSGAKIDQFTISIV-----IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
M DS I ++I + R+ L E+ +++ L DI ++
Sbjct: 374 RM-DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-------DITTYNIVIHG 425
Query: 370 YSKWGRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
K G +EDA +F + L+ +V+S+ +I+G+ Q +++ ++ +M + ++P
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 17/287 (5%)
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
P S V ++ ++S A + +S++ M G D ++ +IVI R + A
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAGY 401
+++ G+ D+V + L++ + + R+ DA + +M R +V+ +N +I G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD---HKV 458
G A+E+F++M R+ V + VT+ ++++ SG W + RD +
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG----RWSDAARLMRDMVMRDI 240
Query: 459 KPRAMHYACMIELLGREGLLDEAFALIRSAP---VEPTKNMWVALLTACRMHGNLVLGKF 515
P + + +I++ +EG EA L V+P + +L+ MHG + K
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 516 AAEKLY--GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
+ + G P + +Y L+N + S ++ E + + + ++GL
Sbjct: 301 MLDLMVTKGCLP-DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 189/417 (45%), Gaps = 19/417 (4%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + +A N++ + L+ +E G D+ ++ L++ +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL--YSFTILIHCFCRCSRLSLAL 134
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKL------FADMPERDAVSWMTLIS 197
+ G M+ GF P + + +L+ + +A L F +P + V + T+I+
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP--NVVIYNTVIN 192
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
GL + + A E F CM ++ + T+ T++ + G ++ +KR +
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSIY 313
+ ALID + K G++ +A+ ++ +M +S V +NS+I+G+ + G +A ++
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
M G D T + +I + +E + + G D L+ Y +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 374 GRMEDARHVFDRML----RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
G++ A+ VF+RM+ +++++N L+ N+G+ E+A+ M E + + + + +T+
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 430 LAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++ + + W +F S++R VKP A+ Y MI L R+GL EA L R
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTR-KGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 137/308 (44%), Gaps = 13/308 (4%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
+L++ + + ++A + D M + V +N++I+G AL ++ M
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G + D T + +I + A + +V+ +++ T L+D + K G + +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 380 RHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
R+++ M+R+ NV ++N+LI G+ HG A MF+ M+ + P+ VT+ +++
Sbjct: 274 RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 333
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEP 492
S E G ++F M+ V A Y +I + G L+ A F + V P
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGD-AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 493 TKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPG-KLSSYVMLLNMYSSSGKLMEAAGVL 551
+ LL +G + E L E + +Y +++ + KL EA +
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 552 KTLKRKGL 559
++L RKG+
Sbjct: 453 RSLTRKGV 460
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 202/476 (42%), Gaps = 39/476 (8%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
E+ G + T + +VN + V + G PD+ N ++ + G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 173 LMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
LM +A +L MP + ++ T+I+GL G Y A E F M S T+
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK 288
+++ + G + ++ S R V D +++ ++++ G+++ A F+ + E
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 289 STVGWNSI----ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
+ N I I GY +G A+++ EM G +D T + ++ + L A
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAG 400
+ + D T L+D + K G +++A +F +M +R +V+++N L+ G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSE--RGWEIFYSMSRDHK 457
+G G + A E++ M+ + ++P +++ +++A CS L+E R W+ S
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS----KN 580
Query: 458 VKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAA 517
+KP M MI+ R G + + + E + C + L+ G
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-------GFVPDCISYNTLIYGFVRE 633
Query: 518 E---KLYGM------EPGKLS----SYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
E K +G+ E G L +Y +L+ + ++ EA VL+ + +G+
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 180/420 (42%), Gaps = 17/420 (4%)
Query: 109 FEILE-LEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
FE++ + G G G TY+ ++N K VF M+ +G PD +L
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 168 HVRCGLMLDARKLFADMPERDAVS----WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGR 223
+ G +++ K+F+DM RD V + +++S SGN +A F + E
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 224 SRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFD 283
+ + +++ G+I V + + L++G D ++ K + +A +F+
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 284 QMPEKS----TVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLA 339
+M E++ + +I G+ G + A+ ++ +M++ ++D T + ++ ++
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 340 SLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN----VISWN 395
++ AK+ A +V ++ + LV+ G + +A V+D M+ KN V+ N
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 455
++I GY G E+M+ E +P+ +++ ++ + + + M +
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 456 H-KVKPRAMHYACMIELLGREGLLDEAFALIRSA---PVEPTKNMWVALLTACRMHGNLV 511
+ P Y ++ R+ + EA ++R V P ++ + ++ NL
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLT 709
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 169/413 (40%), Gaps = 26/413 (6%)
Query: 87 SGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVF 146
+GLC +Y+ A ++F E+ G +TY +L+ + ++VF
Sbjct: 313 NGLCKH-------GKYERAKEVFA--EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 147 GYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDS 202
M S PDL + ++ + R G + A F + E D V + LI G
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 203 GNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVA 262
G + A M ++ T+ T++ ++ ++ + +R + DS+
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRD 318
LID + K G++++A +F +M EK V +N+++ G+ G + A I+ +M
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMED 378
+ SI++ L A + ++ ++ ++ Y + G D
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 379 ARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRER--VIPNHVTFLAV 432
++M+ + + IS+N LI G+ +A + ++M E+ ++P+ T+ ++
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSI 663
Query: 433 LSA-CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
L C + + E E+ + V P Y CMI + L EAF +
Sbjct: 664 LHGFCRQNQMKE--AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 29/310 (9%)
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL----VDSGNYAEAFEQFLCMW 216
++ ++H+ VR G + DA+ M R VS + +++ L + G+ F+ + +
Sbjct: 116 LSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTY 175
Query: 217 ----------EEFNDGRSRTFATMVRASAGL-------GLIEVGRQIHSCALKRGVGEDS 259
E F RS+ F + A L G +E+ ++ + GVG +
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKST----VGWNSIISGYALRGYSEEALSIYLE 315
+ +++ K G +E Q+ EK V +N++IS Y+ +G EEA +
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G +T + VI + E AK+ A ++R G D L+ K G
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 376 MEDARHVFDRMLRKNVIS----WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ + VF M ++V+ ++++++ + G ++A+ F + +IP++V +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 432 VLSACSYSGL 441
++ G+
Sbjct: 416 LIQGYCRKGM 425
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 142/333 (42%), Gaps = 32/333 (9%)
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG----WNSIISGYALRGYSEEALSIYL 314
S A+I + + G + DAQ +M +S V NS+ S ++ G ++ + +
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLI 172
Query: 315 EMRDSGAKIDQ------------FTISI-----VIRICARLASLEHAKQAHAALVRHGFG 357
K+ + FT+SI +I R+ +E A + + R G G
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEM 413
++ +V+ K G+ME ++ K +++++N LI+ Y + G E+A E+
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
M + P T+ V++ G ER E+F M R + P + Y ++
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEAC 351
Query: 474 REGLL---DEAFALIRSAPVEPTKNMWVALLTACRMHGNL--VLGKFAAEKLYGMEPGKL 528
++G + ++ F+ +RS V P + ++++ GNL L F + K G+ P +
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 529 SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTM 561
Y +L+ Y G + A + + ++G M
Sbjct: 412 -IYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 197/472 (41%), Gaps = 48/472 (10%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R KEA L ++EL+G DV +Y +VN + V ++ M G +P+ Y+
Sbjct: 261 RIKEAHHLLLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
++ + R + +A + F++M + D V + TLI G G+ A + F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 217 EEFNDGRSRTFATMVRASAGLG-LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
T+ ++ +G ++E G+ H K G+ DS LI+ Y K G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 276 EDAQCVFDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
+DA V + M + + V + ++I G G + A + EM G + + FT + +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-- 389
+ + ++E A + G +D V T L+D Y K G M+ A+ + ML K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 390 --NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
++++N L+ G+ HG E ++ ML + + PN TF +++ +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
I+ M V P Y +++ + + EA+ L + M
Sbjct: 618 IYKDMC-SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ------------------EMK 658
Query: 508 GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
G F+ +S+Y +L+ + K +EA V ++R+GL
Sbjct: 659 GK----GFSVS---------VSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 21/311 (6%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
+I + G I++A + M K + ++++++GY G ++ + M+ G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
K + + +I + R+ L A++A + ++R G D V T L+D + K G + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 381 HVF----DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
F R + +V+++ A+I+G+ G +A ++F +M + + P+ VTF +++
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---SAPVEPT 493
+G + + + M + P + Y +I+ L +EG LD A L+ ++P
Sbjct: 432 CKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 494 KNMWVALLTACRMHGNL-----VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
+ +++ GN+ ++G+F A L +Y L++ Y SG++ +A
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 549 GVLKTLKRKGL 559
+LK + KGL
Sbjct: 547 EILKEMLGKGL 557
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L++ + + M G +P+++ N +++ + G + +A KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 185 P----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
D V++ TL+ SG +A E M + TF ++ G++
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM------PEKSTVGWN 294
E G ++ + L +G+ ++ +L+ Y +++ A ++ M P+ T +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT--YE 635
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+++ G+ +EA ++ EM+ G + T S++I+ + A++ + R
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 355 GFGSDIVANTGLVDFYS 371
G +D + DF+S
Sbjct: 696 GLAAD----KEIFDFFS 708
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 197/472 (41%), Gaps = 48/472 (10%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R KEA L ++EL+G DV +Y +VN + V ++ M G +P+ Y+
Sbjct: 261 RIKEAHHLLLLMELKGYTPDV--ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
++ + R + +A + F++M + D V + TLI G G+ A + F M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 217 EEFNDGRSRTFATMVRASAGLG-LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
T+ ++ +G ++E G+ H K G+ DS LI+ Y K G +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHM 437
Query: 276 EDAQCVFDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
+DA V + M + + V + ++I G G + A + EM G + + FT + +
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-- 389
+ + ++E A + G +D V T L+D Y K G M+ A+ + ML K
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 390 --NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
++++N L+ G+ HG E ++ ML + + PN TF +++ +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
I+ M V P Y +++ + + EA+ L + M
Sbjct: 618 IYKDMC-SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ------------------EMK 658
Query: 508 GNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
G F+ +S+Y +L+ + K +EA V ++R+GL
Sbjct: 659 GK----GFSVS---------VSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 146/311 (46%), Gaps = 21/311 (6%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
+I + G I++A + M K + ++++++GY G ++ + M+ G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
K + + +I + R+ L A++A + ++R G D V T L+D + K G + A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 381 HVF----DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
F R + +V+++ A+I+G+ G +A ++F +M + + P+ VTF +++
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---SAPVEPT 493
+G + + + M + P + Y +I+ L +EG LD A L+ ++P
Sbjct: 432 CKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 494 KNMWVALLTACRMHGNL-----VLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
+ +++ GN+ ++G+F A L +Y L++ Y SG++ +A
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 549 GVLKTLKRKGL 559
+LK + KGL
Sbjct: 547 EILKEMLGKGL 557
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L++ + + M G +P+++ N +++ + G + +A KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 185 P----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
D V++ TL+ SG +A E M + TF ++ G++
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM------PEKSTVGWN 294
E G ++ + L +G+ ++ +L+ Y +++ A ++ M P+ T +
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT--YE 635
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+++ G+ +EA ++ EM+ G + T S++I+ + A++ + R
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 355 GFGSDIVANTGLVDFYS 371
G +D + DF+S
Sbjct: 696 GLAAD----KEIFDFFS 708
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 184/416 (44%), Gaps = 50/416 (12%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P+T + I L L N+ EAM L + + +G D+ TY +VN
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL--VTYGVVVNGLCKRGDTDLA 240
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
+ M EP + + N ++ + M DA LF +M + + V++ +LIS
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L + G +++A SR + M+ +R + D
Sbjct: 301 LCNYGRWSDA---------------SRLLSDMI--------------------ERKINPD 325
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKST----VGWNSIISGYALRGYSEEALSIYL 314
F ALID + K G + +A+ ++D+M ++S V ++S+I+G+ + +EA ++
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
M D T + +I+ + +E + + + G + V L+ + G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 375 RMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
+ A+ +F M+ N++++N L+ G +G+ E+A+ +FE + R ++ P T+
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++ +G E GW++F ++S VKP + Y MI R+G +EA AL +
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 210/490 (42%), Gaps = 50/490 (10%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + +A N++ + L E +++ G TY L+N +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGE--QMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA----RKLFADMPERDAVSWMTLISGL 199
V G M+ G+EP++ ++ +L+ + + +A ++F + + V++ TLI GL
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
+EA MV L+ G ++ KRG D+
Sbjct: 197 FLHNKASEAMA---------------LIDRMVAKGCQPDLVTYGVVVNGLC-KRG---DT 237
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDS 319
+A L++ + G +E + +N+II G + ++AL+++ EM
Sbjct: 238 DLAFNLLNKMEQ-GKLEPGVLI-----------YNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G + + T S +I A + + ++ D+ + L+D + K G++ +A
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 380 RHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA 435
++D M+++ +++++++LI G+ H + ++A +MFE M+ + P+ VT+ ++
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 436 -CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLD---EAFALIRSAPVE 491
C Y + E G E+F MS+ V + Y +I+ L + G D E F + S V
Sbjct: 406 FCKYKRV-EEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 492 PTKNMWVALLTACRMHGNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKLMEAAG 549
P + LL +G L E L MEP + +Y +++ +GK+ +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-TIYTYNIMIEGMCKAGKVEDGWD 522
Query: 550 VLKTLKRKGL 559
+ L KG+
Sbjct: 523 LFCNLSLKGV 532
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 156/371 (42%), Gaps = 53/371 (14%)
Query: 97 ALCNRYK---EAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG 153
LC +YK +A++LF+ +E +G +V TY +L++ R+ MI
Sbjct: 265 GLC-KYKHMDDALNLFKEMETKGIRPNV--VTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAF 209
PD++ + ++ V+ G +++A KL+ +M +R V++ +LI+G
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING----------- 370
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
CM + ++ +Q+ + + D LI +
Sbjct: 371 ---FCMHDRLDE---------------------AKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 270 SKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
K +E+ VF +M ++ +TV +N +I G G + A I+ EM G +
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T + ++ + LE A L R I +++ K G++ED +F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 386 M----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
+ ++ +V+++N +I+G+ G E+A +F++M + +PN + ++ A G
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 442 SERGWEIFYSM 452
E E+ M
Sbjct: 587 REASAELIKEM 597
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 142/324 (43%), Gaps = 30/324 (9%)
Query: 69 VERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDA 128
+ERK+ P + I+ + EA L++ E+ D TY +
Sbjct: 318 IERKI---------NPDVFTFSALIDAFVKEGKLVEAEKLYD--EMVKRSIDPSIVTYSS 366
Query: 129 LVN-VCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER 187
L+N C+ R + K++F +M+S PD+ N ++ + + + ++F +M +R
Sbjct: 367 LINGFCMHDR-LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 188 ----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVG 243
+ V++ LI GL +G+ A E F M + T+ T++ G +E
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 244 RQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISG 299
+ + + + +I+ K G +ED +F + K V +N++ISG
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH----G 355
+ +G EEA +++ EM++ G + + +IR ARL + ++A A L++ G
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR--ARLR--DGDREASAELIKEMRSCG 601
Query: 356 FGSDIVANTGLVDFYSKWGRMEDA 379
F D + GLV GR++ +
Sbjct: 602 FAGD-ASTIGLVTNMLHDGRLDKS 624
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 201/451 (44%), Gaps = 19/451 (4%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
+Y+ L+N + V G M+ G+EPD+ ++ +L+ + + +A L M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 185 ----PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
+ + V++ TLI GL +EA M T+ T+V G I
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSI 296
++ + K + D + +ID ++ DA +F +M K + V +NS+
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
I G +A + +M + + T S +I + L A++ + +++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIE 412
DI + L++ + R+++A+H+F+ M+ K NV+++N LI G+ + E+ +E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F +M + ++ N VT+ ++ +G + +IF M D V P + Y+ +++ L
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG-VPPDIITYSILLDGL 475
Query: 473 GREGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHGNLVLG--KFAAEKLYGMEPGK 527
+ G L++A F ++ + +EP + ++ G + G F + L G++P
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
+ Y +++ + G EA + + +K G
Sbjct: 536 I-IYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 187/423 (44%), Gaps = 17/423 (4%)
Query: 68 HVERKVPVLEDAHVM--KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGST 125
+ V +++ VM +P+T + I L L N+ EA+ L + + G D+ T
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL--FT 222
Query: 126 YDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP 185
Y +VN I + M E D+ + ++ + DA LF +M
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 186 ER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIE 241
+ + V++ +LI L + G +++A M E + TF+ ++ A G +
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSII 297
+++ +KR + D F +LI+ + +++A+ +F+ M K + V +N++I
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
G+ EE + ++ EM G + T + +I+ + + A++ +V G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEM 413
DI+ + L+D K+G++E A VF+ + + ++ ++N +I G G+ E ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 414 FEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLG 473
F + + V PN + + ++S GL E +F M D + P + Y +I
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARL 581
Query: 474 REG 476
R+G
Sbjct: 582 RDG 584
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 126/285 (44%), Gaps = 13/285 (4%)
Query: 275 IEDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISI 330
++DA +F +M P S V +N ++S A + +S+ M++ D ++ +I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 331 VIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML--- 387
+I R + L A +++ G+ DIV + L++ Y R+ +A + D+M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 388 -RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGW 446
+ N +++N LI G H + +A+ + ++M+ P+ T+ V++ G +
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 447 EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRM 506
+ M + K++ + Y +I+ L +++A L + + V + R
Sbjct: 241 SLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 507 HGNLVLGKFAAEKLYGMEPGKLSSYVM----LLNMYSSSGKLMEA 547
N A+ L M K++ V+ L++ + GKL+EA
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 107/262 (40%), Gaps = 12/262 (4%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVN-VCVGLRSIR 140
+ P S I + +R EA +FE++ + +V TY+ L+ C R
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV--VTYNTLIKGFCKAKRVEE 413
Query: 141 GVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLI 196
G++ +F M G + N ++ + G A+K+F M D +++ L+
Sbjct: 414 GME-LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG 256
GL G +A F + + + T+ M+ G +E G + +GV
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 257 EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSI 312
+ + +I + + G E+A +F +M E T+ +N++I G + +
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAEL 592
Query: 313 YLEMRDSGAKIDQFTISIVIRI 334
EMR G D TIS+VI +
Sbjct: 593 IKEMRSCGFVGDASTISMVINM 614
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 210/487 (43%), Gaps = 57/487 (11%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY+ +VN L ++ + ++ G +PD + ++ + + + A K+F +M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 185 P----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMV-------RA 233
P R+ V++ LI GL + EA + F+ M ++ RT+ ++ R
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 234 SAGLGLI----------------------------EVGRQIHSCALKRGVGEDSFVACAL 265
S L L+ E R++ L++G+ + AL
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 266 IDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
I+ Y K G IEDA V + M + +T +N +I GY + +A+ + +M +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKV 458
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
D T + +I R + + A + + + G D T ++D K R+E+A
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 382 VFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACS 437
+FD + +K NV+ + ALI GY G+ ++A M E+ML + +PN +TF A++
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 438 YSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR---SAPVEPTK 494
G + + M + ++P +I L ++G D A++ + S+ +P
Sbjct: 579 ADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 495 NMWVALL-TACRMHGNLVLGKFAAEKL--YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVL 551
+ + + T CR G L+ + K+ G+ P L +Y L+ Y G+ A VL
Sbjct: 638 HTYTTFIQTYCR-EGRLLDAEDMMAKMRENGVSPD-LFTYSSLIKGYGDLGQTNFAFDVL 695
Query: 552 KTLKRKG 558
K ++ G
Sbjct: 696 KRMRDTG 702
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/489 (21%), Positives = 201/489 (41%), Gaps = 71/489 (14%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P+ I+ L R EA++L + E+E G TY L++ +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNL--VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDA---------RKLFAD----------- 183
+ G M+ G P++ N +++ + + G++ DA RKL +
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 184 --------------MPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR 225
M ER D V++ +LI G SGN+ A+ M +
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 226 TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM 285
T+ +M+ + +E + ++GV + + ALID Y K G +++A + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 286 PEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASL 341
K +++ +N++I G G +EA + +M G + T +I+I +
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 342 EHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNAL 397
+HA ++ G D T + Y + GR+ DA + +M + ++ ++++L
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS----------------ACSYSGL 441
I GYG+ GQ A ++ ++M P+ TFL+++ C+ S +
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 442 SERGW--EIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI----RSAPVEPTKN 495
E E+ M +H V P A Y +I + G L A + R+ + P++
Sbjct: 739 MEFDTVVELLEKMV-EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 496 MWVALLTAC 504
++ ALL+ C
Sbjct: 798 VFNALLSCC 806
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 178/423 (42%), Gaps = 53/423 (12%)
Query: 192 WMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL 251
+ TL++ L G E + ++ M E+ T+ MV LG +E Q S +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 252 KRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGY------- 300
+ G+ D F +LI Y + ++ A VF++MP K + V + +I G
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 301 ----------------ALRGYS------------EEALSIYLEMRDSGAKIDQFTISIVI 332
+R Y+ EAL++ EM ++G K + T +++I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFD----RMLR 388
E A++ ++ G +++ L++ Y K G +EDA V + R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
N ++N LI GY +A+ + +ML +V+P+ VT+ +++ SG + + +
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTACR 505
S+ D + P Y MI+ L + ++EA F + V P M+ AL+
Sbjct: 485 L-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 506 MHGNLVLGKFAAEKLYGME--PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLP 563
G + EK+ P L ++ L++ + GKL EA + + + + GL P
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSL-TFNALIHGLCADGKLKEATLLEEKMVKIGLQ--P 600
Query: 564 TCS 566
T S
Sbjct: 601 TVS 603
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 111/282 (39%), Gaps = 24/282 (8%)
Query: 146 FGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVD 201
F M+S+G +PD + + + R G +LDA + A M E D ++ +LI G D
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 202 SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFV 261
G AF+ M + + TF ++++ H +K G + S
Sbjct: 685 LGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK--------------HLLEMKYGKQKGSEP 730
Query: 262 A-CALIDMYSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEM-RDS 319
CA+ +M +E + + + + + +I G G A ++ M R+
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G + + ++ C +L A + ++ G + + L+ K G E
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 380 RHVFDRMLR----KNVISWNALIAGYGNHGQGEQAIEMFEQM 417
VF +L+ ++ ++W +I G G G E E+F M
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 183/417 (43%), Gaps = 47/417 (11%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
+R+L + + CG P + V++ TLI+G G AF+ F M + +
Sbjct: 271 SRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
++T++ G++ +G ++ S AL +GV D V + ID+Y K G + A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 282 FDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ +M + V + +I G G EA +Y ++ G + T S +I +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML----RKNVIS 393
+L + +++ G+ D+V LVD SK G M A +ML R NV+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMS 453
+N+LI G+ + ++A+++F M + P+ TF V+ G E +F+ M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 454 RDHKVKPRAMHYACMIELLGRE-----GLLDEAFALIRSAPVE---PTKNMWVALLTAC- 504
+ ++P A+ Y +I+ + GL + F L++ + N+ + LL C
Sbjct: 559 K-MGLEPDALAYCTLIDAFCKHMKPTIGL--QLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 505 ------RMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLK 555
+ NL+ GK MEP + +Y ++ Y S +L EA + + LK
Sbjct: 616 RIEDASKFFNNLIEGK--------MEP-DIVTYNTMICGYCSLRRLDEAERIFELLK 663
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/530 (20%), Positives = 213/530 (40%), Gaps = 60/530 (11%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P+ C+ I A DLF+++E G D+ Y L++ +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL--IAYSTLIDGYFKAGMLGMGH 341
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM----PERDAVSWMTLISGL 199
++F + G + D+ + + + ++V+ G + A ++ M + V++ LI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
G EAF + + + + T+++++ G + G ++ +K G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEALSIYLE 315
+ L+D SK G + A +M +S V +NS+I G+ +EAL ++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK--- 372
M G K D T + V+R+ LE A + + G D +A L+D + K
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 373 --------------------------------WGRMEDARHVFDRMLR----KNVISWNA 396
R+EDA F+ ++ +++++N
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
+I GY + + ++A +FE + PN VT ++ + + +F M+ +
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EK 700
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACRMHGNLVLG 513
KP A+ Y C+++ + ++ +F L ++ + P+ + ++ G +
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV--- 757
Query: 514 KFAAEKLYGMEPGKL----SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
A + KL +Y +L+ Y G+L+EAA + + + R G+
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 159/384 (41%), Gaps = 50/384 (13%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY +L++ ++R ++ MI G+ PD+ + ++ + GLML A + M
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 185 PER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
+ + V + +LI G + EA + F M TF T++R S G +
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSK----------------------------- 271
E + K G+ D+ C LID + K
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607
Query: 272 ------CGSIEDAQCVFDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGA 321
C IEDA F+ + E V +N++I GY +EA I+ ++ +
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667
Query: 322 KIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARH 381
+ T++I+I + + ++ A + + + G + V L+D++SK +E +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727
Query: 382 VFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSA-C 436
+F+ M K +++S++ +I G G+ ++A +F Q + +++P+ V + ++ C
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787
Query: 437 SYSGLSERGWEIFYSMSRDHKVKP 460
L E + Y + VKP
Sbjct: 788 KVGRLVEAA--LLYEHMLRNGVKP 809
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 224/541 (41%), Gaps = 66/541 (12%)
Query: 42 WRYPFSQIRCSSSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTS-----GLCSQIEKL 96
W F+ S + LR + I V+ V + D +P S L S + K+
Sbjct: 39 WERSFAS--ASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKM 96
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
N+++ + L E ++ G D+ TY +N + V M+ G+EP
Sbjct: 97 ---NKFELVISLGEQMQTLGISHDL--YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEP 151
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQF 212
D+ ++ +L+ + + DA L M E D ++ TLI GL F
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL------------F 199
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
L +AS + L++ ++RG D +++ K
Sbjct: 200 L----------------HNKASEAVALVDQ-------MVQRGCQPDLVTYGTVVNGLCKR 236
Query: 273 GSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
G I+ A + +M E V +N+II G + ++AL+++ EM + G + D FT
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
S +I A + + ++ ++V + L+D + K G++ +A ++D M++
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 389 K----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
+ ++ ++++LI G+ H + ++A MFE M+ + PN VT+ ++ + E
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 445 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALL 501
G E+F MS+ V + Y +I + D A F + S V P + LL
Sbjct: 417 GMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 502 TACRMHGNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
+G L E L MEP + +Y +++ +GK+ + + L KG+
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEP-DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 560 T 560
+
Sbjct: 535 S 535
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 180/416 (43%), Gaps = 15/416 (3%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
KP T + I L L N+ EA+ L + + G D+ TY +VN I
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL--VTYGTVVNGLCKRGDIDLA 242
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
+ M E D+ + N ++ + M DA LF +M + D ++ +LIS
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L + G +++A M E + TF+ ++ A G + +++ +KR + D
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYL 314
F +LI+ + +++A+ +F+ M K + V ++++I G+ EE + ++
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
EM G + T + +I + ++A+ +V G +I+ L+D K G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 375 RMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
++ A VF+ + R ++ ++N +I G G+ E E+F + + V PN + +
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++S G E + M D + P + Y +I R+G + + LI+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELIK 597
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 58/305 (19%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLH---MHVRCGLMLDARKLF 181
T+ AL++ V + ++++ MI +PD++ + +++ MH R + +A+ +F
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR---LDEAKHMF 386
Query: 182 ADMPERD----AVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRA---- 233
M +D V++ TLI G + E E F M + G + T+ T++
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 234 --------------SAGL------------GLIEVGRQIHSCA----LKRGVGE-DSFVA 262
S G+ GL + G+ + L+R E D +
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 263 CALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRD 318
+I+ K G +ED +F + K + + +N++ISG+ +G EEA S+ +M++
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 319 SGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH----GFGSDIVANTGLVDFYSKWG 374
G + T + +IR ARL + ++A A L++ GF D + GLV G
Sbjct: 567 DGPLPNSGTYNTLIR--ARLR--DGDREASAELIKEMRSCGFAGD-ASTIGLVTNMLHDG 621
Query: 375 RMEDA 379
R++ +
Sbjct: 622 RLDKS 626
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 187/438 (42%), Gaps = 40/438 (9%)
Query: 146 FGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA----DMPERDA------VSWMTL 195
G M G +PD VL M+ + A + F D + D+ ++ T+
Sbjct: 245 LGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTM 304
Query: 196 ISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLG-LIEVGRQIHSCALKRG 254
I SG EA E F M EE + TF TM+ G L EV + + +K
Sbjct: 305 IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT--MKLH 362
Query: 255 VGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEAL 310
D+ LI +++K IE A F +M + V + +++ +++R EEA
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 311 SIYLEMRDSGAKIDQFTISIVIRICARLASLEHA----KQAHAA--LVRHGFGSDIVANT 364
+ EM D +ID++T S + R+ LE + K+ H A + G+ ++I
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI---- 478
Query: 365 GLVDFYSKWGRMEDARHVF---DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRER 421
D Y + G + +A VF + ++ VI +N +I YG E+A E+FE M+
Sbjct: 479 ---DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG 535
Query: 422 VIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIE---LLGREGLL 478
V P+ T+ ++ + + + +G + R+ + Y +I LG+ +
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKG-RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 479 DEAFALIRSAPVEPTKNMWVALLTACRMHGNL--VLGKFAAEKLYGMEPGKLSSYVMLLN 536
+E + + +EP ++ L+ A GN+ + A K G+ PG Y L+
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI-PGNSVIYNSLIK 653
Query: 537 MYSSSGKLMEAAGVLKTL 554
+Y+ G L EA + + L
Sbjct: 654 LYTKVGYLDEAEAIYRKL 671
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/537 (19%), Positives = 210/537 (39%), Gaps = 65/537 (12%)
Query: 82 MKPS--TSGLCSQIEKLALCNRYKEAMDLFEILELEGDGAD----VGGSTYDALVNVCVG 135
M+P T+G+ Q+ K A +++A + F+ + + AD + TY+ +++
Sbjct: 253 MQPDEVTTGIVLQMYKKA--REFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGK 310
Query: 136 LRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP---ERDAVSW 192
I+ F M+ G P N ++H++ G + + L M D ++
Sbjct: 311 SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTY 370
Query: 193 MTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALK 252
LIS + + A F M ++ ++ T++ A + ++E + +
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Query: 253 RGVGEDSFVACAL----------------------------------IDMYSKCGSIEDA 278
V D + AL ID Y + G + +A
Sbjct: 431 DNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEA 490
Query: 279 QCVF---DQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRIC 335
+ VF ++ +++ + +N +I Y + E+A ++ M G D+ T + +++I
Sbjct: 491 ERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQIL 550
Query: 336 ARLASLEHAKQAHAALVRH-GFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKN---- 390
A A + H + + +R G+ SD + ++ + K G++ A V+ M+ N
Sbjct: 551 AS-ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPD 609
Query: 391 VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFY 450
V+ + LI + + G +QA+ E M + N V + +++ + G + I+
Sbjct: 610 VVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYR 669
Query: 451 SM--SRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHG 508
+ S + P CMI L ++ +A A+ S N + + C
Sbjct: 670 KLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKK 729
Query: 509 NLVLGKF--AAEKLYGMEPGKL----SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
N G+F A + M K+ SY +L +++ G+ EA K + G+
Sbjct: 730 N---GRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/423 (19%), Positives = 186/423 (43%), Gaps = 30/423 (7%)
Query: 111 ILELEGDGADVGGSTYDALVNVCVGL----RSIRGVKR--VFGYMISNGFEPDLYMMNRV 164
I E++ D ++ T AL + V +S KR V G M S G+ ++
Sbjct: 425 IAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI------ 478
Query: 165 LHMHVRCGLMLDARKLF---ADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
+ G + +A ++F ++ +R + + +I S + +A E F M
Sbjct: 479 -DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
T+ T+V+ A + GR + G D CA+I + K G + A+ V
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 282 FDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ +M E V + +I+ +A G ++A+S M+++G + + +I++ +
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTK 657
Query: 338 LASLEHAKQAHAALVRHGFGS---DIVANTGLVDFYSKWGRMEDARHVFDRMLRK---NV 391
+ L+ A+ + L++ + D+ + +++ YS+ + A +FD M ++ N
Sbjct: 658 VGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANE 717
Query: 392 ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYS 451
++ ++ Y +G+ E+A ++ +QM +++ + +++ +VL + G + E F
Sbjct: 718 FTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE 777
Query: 452 MSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSAPVEPTKNMWVALLTACRMHG 508
M ++P + + +L + G+ +A IR ++ +W++ L++ G
Sbjct: 778 MV-SSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
Query: 509 NLV 511
+ V
Sbjct: 837 DCV 839
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 109/241 (45%), Gaps = 35/241 (14%)
Query: 251 LKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVGW--NSIISGYALRGYSEE 308
+++G+ + LID+YSK G A C +M S +G + + +G L+
Sbjct: 214 IRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKM---SKIGMQPDEVTTGIVLQ----- 265
Query: 309 ALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVD 368
+Y + R+ K ++F + + E+ +H L + + + ++D
Sbjct: 266 ---MYKKAREF-QKAEEFF--------KKWSCDENKADSHVCLSSYTYNT-------MID 306
Query: 369 FYSKWGRMEDARHVFDRMLRKNV----ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIP 424
Y K G++++A F RML + + +++N +I YGN+GQ + + + M + P
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAP 365
Query: 425 NHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+ T+ ++S + + ER F M +D +KP + Y ++ +++EA L
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEM-KDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 485 I 485
I
Sbjct: 425 I 425
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 207/482 (42%), Gaps = 25/482 (5%)
Query: 96 LALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFE 155
+A +Y +DL + +EL+G ++ T ++N C R + G +I G+E
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNL--YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE 139
Query: 156 PDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQ 211
PD + +++ G + +A +L M E ++ L++GL +G ++A
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSK 271
M E T+ +++ G + ++ +R + D+ +ID K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 272 CGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT 327
GS+++A +F++M K + + ++I G+ G ++ + +M D
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
S +I + L A++ H +++ G D V T L+D + K +++ A H+ D M+
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 388 RK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
K N+ ++N LI GY + +E+F +M V+ + VT+ ++ G E
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
E+F M +V+P + Y +++ L G ++A + +E +K +
Sbjct: 440 VAKELFQEMV-SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK--IEKSKMELDIGIYN 496
Query: 504 CRMHGNLVLGK-------FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
+HG K F + L G++P + +Y +++ G L EA + + ++
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKP-DVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 557 KG 558
G
Sbjct: 556 DG 557
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 17/299 (5%)
Query: 276 EDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
+DA +F +M P + ++ + S A + L + +M G + +T+SI+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML---- 387
I C R L A A +++ G+ D V + L++ GR+ +A + DRM+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
+ +I+ NAL+ G +G+ A+ + ++M+ PN VT+ VL SG + E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
+ M + K+K A+ Y+ +I+ L ++G LD AF L ++ K + T R
Sbjct: 234 LLRKME-ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR-- 290
Query: 508 GNLVLGKF--AAEKLYGMEPGKLSSYVM----LLNMYSSSGKLMEAAGVLKTLKRKGLT 560
G G++ A+ L M K++ V+ L++ + GKL EA + K + ++G++
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 15/415 (3%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + + ++ +Y + L+E +++ G ++ T + L+N +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL--CTCNILLNCFCRCSQLSLAL 136
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGL 199
G MI G EP + +L+ R + DA +F M + + V + T+I GL
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
S A + M ++ T+ +++ G ++ SC KR + D
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEALSIYLE 315
F ALID K G + +A+ +++M +S V ++ +I G + +EA ++
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G D T SI+I + +EH + + + G + V T L+ Y + G+
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 376 MEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ A +F RM + N+I++N L+ G ++G+ E+A+ + M + + + VT+
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++ +G W+I+ S++ + P Y M+ L ++GL EA AL R
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNC-QGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 136/318 (42%), Gaps = 10/318 (3%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
KP+ + I+ L + A+DL +E +G G DV TY++L++
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV--VTYNSLISGLCSSGRWSDA 240
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
R+ M PD++ N ++ V+ G + +A + + +M R D V++ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L EA E F M + T++ ++ +E G ++ +RGV +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIYL 314
+ LI Y + G + A+ +F +M + + +N ++ G G E+AL I
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
+M+ +G D T +I+IR + + A + +L G DI T ++ K G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 375 RMEDARHVFDRMLRKNVI 392
+A +F +M ++
Sbjct: 481 LRREADALFRKMKEDGIL 498
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 19/310 (6%)
Query: 265 LIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
L++ + +C + A +M E S V + S+++G+ +AL ++ +M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
K + + +I + +++A + + G G D+V L+ GR DA
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 381 HVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF-LAVLSA 435
+ M ++ +V ++NALI G+ +A E +E+M+R + P+ VT+ L +
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 436 CSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI----RSAPVE 491
C YS L E E + P + Y+ +I + ++ L + V
Sbjct: 302 CMYSRLDEA--EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 492 PTKNMWVALLTACRMHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAG 549
T + + CR G L + + F G+ P + +Y +LL+ +GK+ +A
Sbjct: 360 NTVTYTILIQGYCR-AGKLNVAEEIFRRMVFCGVHP-NIITYNVLLHGLCDNGKIEKALV 417
Query: 550 VLKTLKRKGL 559
+L +++ G+
Sbjct: 418 ILADMQKNGM 427
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 215/478 (44%), Gaps = 22/478 (4%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
+ EA+ +FE E++ D A STY+ L+++ + + M G P++
Sbjct: 358 KVDEALKVFE--EMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMW 216
+N ++ + + +A +F +M + D +++ +LI GL G +A++ + M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 217 EEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIE 276
+ S + ++++ G E G +I+ + + D + +D K G E
Sbjct: 475 DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 277 DAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI 332
+ +F+++ + V ++ +I G G++ E ++ M++ G +D +IVI
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 333 RICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK--- 389
+ + A Q + GF +V ++D +K R+++A +F+ K
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 390 -NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
NV+ +++LI G+G G+ ++A + E+++++ + PN T+ ++L A +
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 449 FYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRSAPVEPTKNMWVALLTACR 505
F SM ++ K P + Y +I L + ++AF ++ ++P+ + +++
Sbjct: 715 FQSM-KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLA 773
Query: 506 MHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTM 561
GN+ F K G P + Y ++ S+ + M+A + + +R+GL +
Sbjct: 774 KAGNIAEAGALFDRFKANGGVPDS-ACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 158/403 (39%), Gaps = 50/403 (12%)
Query: 78 DAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLR 137
D V P CS I+ L R +A ++E + L+ D Y +L+
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM-LDSD-CRTNSIVYTSLIKNFFNHG 496
Query: 138 SIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWM 193
+++ MI+ PDL ++N + + G R +F ++ R DA S+
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 194 TLISGLVDSGNYAEAFEQFLCMWEE--------FN---DGRSR----------------- 225
LI GL+ +G E +E F M E+ +N DG +
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 226 -------TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDA 278
T+ +++ A + ++ + A + + + + +LID + K G I++A
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 279 QCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRI 334
+ +++ +K WNS++ EAL + M++ +Q T I+I
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 335 CARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS- 393
++ A + + G ++ T ++ +K G + +A +FDR +
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 394 ---WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
+NA+I G N + A +FE+ R R +P H VL
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEET-RRRGLPIHNKTCVVL 838
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)
Query: 264 ALIDMYSKCGSIEDAQCVFDQMPE---KSTVG-WNSIISGYALRGYSEEALSIYLEMRDS 319
LI +S + +F QM E + TV + ++I G+A G + ALS+ EM+ S
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
D ++ I ++ ++ A + + +G D V T ++ K R+++A
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 292
Query: 380 RHVFDRMLRKN-----VISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
+F+ L KN ++N +I GYG+ G+ ++A + E+ + IP+ + + +L+
Sbjct: 293 VEMFEH-LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILT 351
Query: 435 ACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
G + ++F M +D P Y +I++L R G LD AF L
Sbjct: 352 CLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDTAFEL 399
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/460 (18%), Positives = 180/460 (39%), Gaps = 45/460 (9%)
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
E+E +G TY +++ V + +F ++ N P Y N ++ + G
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 173 LMLDARKLFADMPERDA----VSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
+A L + + +++ +++ L G EA + F M ++ S T+
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS-TYN 381
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK 288
++ G ++ ++ K G+ + ++D K +++A +F++M K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 289 ----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
+ + S+I G G ++A +Y +M DS + + + +I+ E
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI----SWNALIAG 400
+ + ++ D+ +D K G E R +F+ + + + S++ LI G
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKP 460
G + E+F M + + + + V+ G + +++ M + +P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEP 620
Query: 461 RAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKL 520
+ Y +I+ L + LDEA+ L A + R+ N+V+
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-------------RIELNVVI-------- 659
Query: 521 YGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
Y L++ + G++ EA +L+ L +KGLT
Sbjct: 660 ----------YSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/420 (19%), Positives = 168/420 (40%), Gaps = 67/420 (15%)
Query: 124 STYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
S Y L+ + + +F M G+EP +++ ++ + G + A L +
Sbjct: 169 SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDE 228
Query: 184 MPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSR-------TFATMVRASAG 236
M + + L + +DS + W+ F++ + T+ +M+
Sbjct: 229 MKSSSLDADIVLYNVCIDSFGKVGKVDM---AWKFFHEIEANGLKPDEVTYTSMIGV--- 282
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVAC-----ALIDMYSKCGSIEDAQCVFDQMPEK--- 288
L + R + + + ++ V C +I Y G ++A + ++ K
Sbjct: 283 --LCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 289 -STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQA 347
S + +N I++ G +EAL ++ EM+ A + T +I+I + R L+ A +
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFEL 399
Query: 348 HAALVRHGFGSDI-----------------------------------VANTGLVDFYSK 372
++ + G ++ + L+D K
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK 459
Query: 373 WGRMEDARHVFDRML----RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
GR++DA V+++ML R N I + +LI + NHG+ E ++++ M+ + P+ +
Sbjct: 460 VGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD-LQ 518
Query: 429 FLAVLSACSY-SGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
L C + +G E+G +F + + + P A Y+ +I L + G +E + L S
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 69/506 (13%)
Query: 65 KIGHVERKVPV---LEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADV 121
K G VE V + +E+A V P+ + I+ L +C RY EA E ++ G +
Sbjct: 272 KGGKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKE--KMVERGMEP 328
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
TY LV + I V M GF P++ + N ++ + G + A ++
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 182 ADMPER----DAVSWMTLISGLVDSG---NYAEAFEQFLCMWEEFNDGRSRT-------- 226
M + + ++ TLI G +G N ++ L + N G +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 227 --FATMVR---------ASAGLGLIEV------GRQIHSCALK-------RGVGEDSFVA 262
F + +R S G GL+ HS AL+ +G D+ +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 263 CALIDMYSKCGSIEDA----------QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
AL+ + G +++A CV D+ V +N++ISG + +EA
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDR------VSYNTLISGCCGKKKLDEAFMF 562
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
EM G K D +T SI+I + +E A Q R+G D+ + ++D K
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 373 WGRMEDARHVFDRMLRKNV----ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
R E+ + FD M+ KNV + +N LI Y G+ A+E+ E M + + PN T
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR-- 486
+ +++ S E +F M R ++P HY +I+ G+ G + + L+R
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 487 -SAPVEPTKNMWVALLTACRMHGNLV 511
S V P K + ++ GN+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVT 767
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 218/554 (39%), Gaps = 99/554 (17%)
Query: 99 CNRYKE-----AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG 153
C ++K A+D+F +L G +T + L+ V + F ++ G
Sbjct: 199 CTQFKRDGCYLALDVFPVLA--NKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKG 255
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAF 209
PD+Y+ ++ + G + +A KLF+ M E + V++ T+I GL G Y EAF
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
M E + T++ +V+ I + K+G + V LID +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 270 SKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
+ GS+ A + D M K ++ +N++I GY G ++ A + EM G ++Q
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 326 --FTISIVIRICARL-----------------------------ASLEHAKQAHA----- 349
FT S++ +C+ L +H K + A
Sbjct: 436 GSFT-SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARH----------VFDRMLRKNVIS------ 393
+ GF D + L+ + G++++A V DR+ +IS
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 394 -----------------------WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
++ LI G N + E+AI+ ++ R ++P+ T+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRS 487
++ C + +E G E F M + V+P + Y +I R G L A L ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 488 APVEPTKNMWVALLTACRMHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
+ P + +L+ + + K F ++ G+EP + Y L++ Y G+++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN-VFHYTALIDGYGKLGQMV 732
Query: 546 EAAGVLKTLKRKGL 559
+ +L+ + K +
Sbjct: 733 KVECLLREMHSKNV 746
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 206/506 (40%), Gaps = 69/506 (13%)
Query: 65 KIGHVERKVPV---LEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADV 121
K G VE V + +E+A V P+ + I+ L +C RY EA E ++ G +
Sbjct: 272 KGGKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKE--KMVERGMEP 328
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
TY LV + I V M GF P++ + N ++ + G + A ++
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 182 ADMPER----DAVSWMTLISGLVDSG---NYAEAFEQFLCMWEEFNDGRSRT-------- 226
M + + ++ TLI G +G N ++ L + N G +
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
Query: 227 --FATMVR---------ASAGLGLIEV------GRQIHSCALK-------RGVGEDSFVA 262
F + +R S G GL+ HS AL+ +G D+ +
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508
Query: 263 CALIDMYSKCGSIEDA----------QCVFDQMPEKSTVGWNSIISGYALRGYSEEALSI 312
AL+ + G +++A CV D+ V +N++ISG + +EA
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDR------VSYNTLISGCCGKKKLDEAFMF 562
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
EM G K D +T SI+I + +E A Q R+G D+ + ++D K
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 373 WGRMEDARHVFDRMLRKNV----ISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
R E+ + FD M+ KNV + +N LI Y G+ A+E+ E M + + PN T
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR-- 486
+ +++ S E +F M R ++P HY +I+ G+ G + + L+R
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 741
Query: 487 -SAPVEPTKNMWVALLTACRMHGNLV 511
S V P K + ++ GN+
Sbjct: 742 HSKNVHPNKITYTVMIGGYARDGNVT 767
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 116/554 (20%), Positives = 218/554 (39%), Gaps = 99/554 (17%)
Query: 99 CNRYKE-----AMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNG 153
C ++K A+D+F +L G +T + L+ V + F ++ G
Sbjct: 199 CTQFKRDGCYLALDVFPVLA--NKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKG 255
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAF 209
PD+Y+ ++ + G + +A KLF+ M E + V++ T+I GL G Y EAF
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
M E + T++ +V+ I + K+G + V LID +
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 270 SKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
+ GS+ A + D M K ++ +N++I GY G ++ A + EM G ++Q
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 326 --FTISIVIRICARL-----------------------------ASLEHAKQAHA----- 349
FT S++ +C+ L +H K + A
Sbjct: 436 GSFT-SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARH----------VFDRMLRKNVIS------ 393
+ GF D + L+ + G++++A V DR+ +IS
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 394 -----------------------WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
++ LI G N + E+AI+ ++ R ++P+ T+
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL---IRS 487
++ C + +E G E F M + V+P + Y +I R G L A L ++
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKN-VQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 488 APVEPTKNMWVALLTACRMHGNLVLGK--FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLM 545
+ P + +L+ + + K F ++ G+EP + Y L++ Y G+++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN-VFHYTALIDGYGKLGQMV 732
Query: 546 EAAGVLKTLKRKGL 559
+ +L+ + K +
Sbjct: 733 KVECLLREMHSKNV 746
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 182/419 (43%), Gaps = 16/419 (3%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRG 141
+KP S I+ L ++ + A+ + E + G D T+ ++ + + G
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD--EKTFTTVMQGYIEEGDLDG 242
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAV-----SWMTLI 196
R+ M+ G +N ++H + G + DA +M +D ++ TL+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 197 SGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVG 256
+GL +G+ A E M +E D T+ +++ LG ++ ++ + R
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 257 EDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSI 312
++ LI K +E+A + + K + +NS+I G L A+ +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+ EMR G + D+FT +++I L+ A + G ++ L+D + K
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 373 WGRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
+ +A +FD M + +N +++N LI G + E A ++ +QM+ E P+ T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 429 FLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRS 487
+ ++L+ G ++ +I +M+ + +P + Y +I L + G ++ A L+RS
Sbjct: 543 YNSLLTHFCRGGDIKKAADIVQAMT-SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 151/371 (40%), Gaps = 48/371 (12%)
Query: 101 RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYM 160
R ++A++ + + + DG T++ LVN ++ + M+ G++PD+Y
Sbjct: 274 RVEDALNFIQEMSNQ-DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 161 MNRVLHMHVRCGLMLDARKLFADMPERD----AVSWMTLISGLVDSGNYAEAFE------ 210
N V+ + G + +A ++ M RD V++ TLIS L EA E
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 211 ---------------QFLCM-------WEEFNDGRSR-------TFATMVRASAGLGLIE 241
Q LC+ E F + RS+ T+ ++ + G ++
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 242 VGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSII 297
+ G LID + K +A+ +FD+M +++V +N++I
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 298 SGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFG 357
G E+A + +M G K D++T + ++ R ++ A A+ +G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 358 SDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI----SWNALIAGYGNHGQGEQAIEM 413
DIV L+ K GR+E A + + K + ++N +I G + +AI +
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 414 FEQMLRERVIP 424
F +ML + P
Sbjct: 633 FREMLEQNEAP 643
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 18/285 (6%)
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
P+ ST +N +I A+ + +M G D+ T + V++ L+ A
Sbjct: 187 PDVST--FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI-----SWNALIAG 400
+ +V G V+ +V + K GR+EDA + M ++ ++N L+ G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-SRDHKVK 459
G + AIE+ + ML+E P+ T+ +V+S G + E+ M +RD
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD--CS 362
Query: 460 PRAMHYACMIELLGREGLLDEAFALIR---SAPVEP---TKNMWVALLTACRMHGNLVLG 513
P + Y +I L +E ++EA L R S + P T N + L R H + +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH-RVAME 421
Query: 514 KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
F + G EP + + Y ML++ S GKL EA +LK ++ G
Sbjct: 422 LFEEMRSKGCEPDEFT-YNMLIDSLCSKGKLDEALNMLKQMELSG 465
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 210/492 (42%), Gaps = 21/492 (4%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + +A N++ + L E +++ G TY L+N +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGE--QMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGL 199
V M+ G+EPD+ +N +L+ + DA L M E D+ ++ TLI GL
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
+EA M + T+ +V G I++ + + +
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLE 315
+ +ID ++ DA +F +M K + V +NS+I G +A + +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M + + T S +I + L A++ + +++ DI + L++ + R
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 376 MEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+++A+H+F+ M+ K NV+++N LI G+ + ++ +E+F +M + ++ N VT+
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEA---FALIRSA 488
++ + + +F M D V P M Y+ +++ L G ++ A F ++ +
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 489 PVEPTKNMWVALLTACRMHGNLVLG--KFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLME 546
+EP + ++ G + G F + L G++P + +Y +++ + G E
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-NVVTYTTMMSGFCRKGLKEE 554
Query: 547 AAGVLKTLKRKG 558
A + + +K +G
Sbjct: 555 ADALFREMKEEG 566
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 173/422 (40%), Gaps = 86/422 (20%)
Query: 97 ALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEP 156
LC R + L + ++E + G Y+ +++ +++ +F M + G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 157 DLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQF 212
++ N ++ G DA +L +DM ER + V++ LI V G EA
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA---- 345
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
+++ +KR + D F +LI+ +
Sbjct: 346 -------------------------------EKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 273 GSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
+++A+ +F+ M K + V +N++I G+ +E + ++ EM G + T
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ +I HGF F ++ ++A+ VF +M+
Sbjct: 435 TTLI---------------------HGF------------FQAR--ECDNAQIVFKQMVS 459
Query: 389 KNVI----SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
V+ +++ L+ G N+G+ E A+ +FE + R ++ P+ T+ ++ +G E
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 445 GWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE---PTKNMWVALL 501
GW++F S+S VKP + Y M+ R+GL +EA AL R E P + L+
Sbjct: 520 GWDLFCSLSL-KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 502 TA 503
A
Sbjct: 579 RA 580
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 187/457 (40%), Gaps = 57/457 (12%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK--RVFGYMISNGFEPD 157
N ++A++L I ++ DG Y ++ I V R++ + + E D
Sbjct: 211 NDIEKALNL--IAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELD 268
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMT-----LISGLVDSGNYAEAFEQF 212
+ ++N ++ + G A +L M + +S T +IS L DSG EA F
Sbjct: 269 VQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 213 LCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKC 272
+ + R+R + +++ G ++ + S KRGV D LID Y
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 273 GSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
G E A+ V +M + ++ ++ +++G+ RG ++ + EM+ G K D+
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
++VI + L+HA ++ G D V L+D + K GR A +F+ M R
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 389 K---------------------------------------NVISWNALIAGYGNHGQGEQ 409
+ NV++ L+ YG G+
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 469
AIE E+M + P+ + A+++A + GLSE+ F M+ D +KP + +I
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLI 626
Query: 470 ELLGREGLLDEAFALI---RSAPVEPTKNMWVALLTA 503
G + EAFA++ + V+P + L+ A
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 159/407 (39%), Gaps = 54/407 (13%)
Query: 82 MKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRG 141
+ T+ L S I LA R EA LFE EL G Y+AL+ V ++
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFE--ELRQSGIKPRTRAYNALLKGYVKTGPLKD 357
Query: 142 VKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERD----AVSWMTLIS 197
+ + M G PD + + ++ +V G AR + +M D + + L++
Sbjct: 358 AESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLA 417
Query: 198 GLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGE 257
G D G + + F+ V +++ S GV
Sbjct: 418 GFRDRGEWQKTFQ-------------------------------VLKEMKSI----GVKP 442
Query: 258 DSFVACALIDMYSKCGSIEDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIY 313
D +ID + K ++ A FD+M E V WN++I + G A ++
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 314 LEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKW 373
M G T +I+I + K+ + G ++V +T LVD Y K
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 374 GRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTF 429
GR DA + M L+ + +NALI Y G EQA+ F M + + P +
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP---SL 619
Query: 430 LAVLSACSYSGLSERGWEIFYSMS--RDHKVKPRAMHYACMIELLGR 474
LA+ S + G R E F + +++ VKP + Y +++ L R
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 115/291 (39%), Gaps = 50/291 (17%)
Query: 109 FEIL-ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHM 167
F++L E++ G Y+ +++ + F M+S G EPD N ++
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 168 HVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTF 227
H + G + A ++F M R + T + +++S Y + +E D R
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS--YGD---------QERWDDMKRLL 537
Query: 228 ATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP- 286
M +G+ + L+D+Y K G DA ++M
Sbjct: 538 GKMK--------------------SQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 287 ---EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVI-------RICA 336
+ S+ +N++I+ YA RG SE+A++ + M G K ++ +I R
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
A L++ K+ +G D+V T L+ + + + V++ M+
Sbjct: 638 AFAVLQYMKE-------NGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMI 681
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 208/494 (42%), Gaps = 21/494 (4%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS +A ++ +D + LEL G ++ T + ++N
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNI--YTLNIMINCFCRCCKTCFAY 143
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGL 199
V G ++ G+EPD N ++ G + +A L M E D V++ ++++G+
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
SG+ + A + M E T++T++ + G I+ + +G+
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLE 315
+L+ K G D + M + + + +N ++ + G +EA +Y E
Sbjct: 264 VTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G + T + ++ L A +VR+ DIV T L+ Y R
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 376 MEDARHVF----DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
++D VF R L N ++++ L+ G+ G+ + A E+F++M+ V+P+ +T+
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAP-- 489
+L +G E+ EIF + + K+ + Y +IE + + G +++A+ L S P
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 490 -VEPTKNMWVALLTACRMHGNLVLGKFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKLME 546
V+P + +++ G+L K+ G P +Y L+ + G L
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND-CTYNTLIRAHLRDGDLTA 561
Query: 547 AAGVLKTLKRKGLT 560
+A +++ +K G +
Sbjct: 562 SAKLIEEMKSCGFS 575
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 183/408 (44%), Gaps = 18/408 (4%)
Query: 89 LCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGY 148
L S I KL +Y + L + +E+ G D+ T++ ++N + + G
Sbjct: 91 LLSAIVKL---KKYDVVISLGKKMEVLGIRNDL--YTFNIVINCFCCCFQVSLALSILGK 145
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPE----RDAVSWMTLISGLVDSGN 204
M+ G+EPD + +++ R + DA L M E D V++ +I L +
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
+AF+ F + + T+ +V ++ S +K+ + + A
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKST----VGWNSIISGYALRGYSEEALSIYLEMRDSG 320
L+D + K G + +A+ +F++M S V ++S+I+G L +EA ++ M G
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
D + + +I + +E + + + G S+ V L+ + + G ++ A+
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 381 HVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
F +M + ++ ++N L+ G ++G+ E+A+ +FE M + + + VT+ V+
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL 484
+G E W +F S+S +KP + Y M+ L +GLL E AL
Sbjct: 446 CKTGKVEEAWSLFCSLSL-KGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 18/346 (5%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
KP + I+ L R +A D F+ E+E G TY ALVN
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFK--EIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISG 198
R+ MI P++ + +L V+ G +L+A++LF +M + D V++ +LI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L EA + F M + ++ T++ +E G ++ +RG+ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQM------PEKSTVGWNSIISGYALRGYSEEALSI 312
+ LI + + G ++ AQ F QM P+ T +N ++ G G E+AL I
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT--YNILLGGLCDNGELEKALVI 422
Query: 313 YLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSK 372
+ +M+ +D T + VIR + +E A +L G DIV T ++
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 373 WGRMEDARHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQML 418
G + + ++ +M ++ ++ + ++ G + E+ ++ML
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLS----DGDITLSAELIKKML 524
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 146/323 (45%), Gaps = 12/323 (3%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGN 204
M+ G++PD+ N ++ + + DA F ++ + + V++ L++GL +S
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
+++A M ++ T++ ++ A G + +++ ++ + D +
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
LI+ I++A +FD M K V +N++I+G+ E+ + ++ EM G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 321 AKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDAR 380
+ T + +I+ + ++ A++ + + G DI L+ G +E A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 381 HVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
+F+ M ++ +++++ +I G G+ E+A +F + + + P+ VT+ ++S
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 437 SYSGLSERGWEIFYSMSRDHKVK 459
GL ++ M ++ +K
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMK 503
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 185/420 (44%), Gaps = 19/420 (4%)
Query: 154 FEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAF 209
+ P ++ N VL +R A LF +M +R D ++ TLI+ G + A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 210 EQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMY 269
M ++ G ++ ++ S L I S + G+ D ++I++Y
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 270 SKCGSIEDAQCVFDQMPE----KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
K +A+ + +M E +TV +++++S Y EALS++ EM++ +D
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
T +I+I + +L ++ A + +L + ++V+ ++ Y + +A H+F
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 386 MLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
M RK NV+++N +I YG + E+A + ++M + PN +T+ ++S +G
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 442 SERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVE---PTKNMWV 498
+R +F + R V+ + Y MI R GL+ A L+ + P +
Sbjct: 451 LDRAATLFQKL-RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAIT 509
Query: 499 ALLTACRMHGNLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
L A R + + A E E +S + ++N+YS + + + V + ++ G
Sbjct: 510 ILAKAGRTEEATWVFRQAFE---SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAG 566
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 176/412 (42%), Gaps = 24/412 (5%)
Query: 98 LCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPD 157
LC+ Y +A+ +F L+ G D+ Y++++NV + R + + M G P+
Sbjct: 238 LCD-YSKAISIFSRLKRSGITPDLVA--YNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 158 LYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDS----GNYAEAFEQFL 213
+ +L ++V L+A +FA+M E + +T + ++D EA F
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 214 CMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCAL--KRGVGEDSFVACALIDMYSK 271
+ + + ++ T++R L G IH L ++ + ++ +I +Y K
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELF--GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 272 CGSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT 327
E A + +M E + + +++IIS + G + A +++ ++R SG +IDQ
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL 472
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
+I R+ + HAK+ L+ D + + +K GR E+A VF +
Sbjct: 473 YQTMIVAYERVGLMGHAKR----LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 528
Query: 388 R----KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSE 443
K++ + +I Y + + IE+FE+M P+ VL+A E
Sbjct: 529 ESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFE 588
Query: 444 RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKN 495
+ ++ M + V P +H+ M+ L + + +L + +P N
Sbjct: 589 KADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVN 639
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 195/454 (42%), Gaps = 19/454 (4%)
Query: 122 GGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLF 181
G TY+ L+N I + G M+ G+EP + ++ +L+ + + DA L
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 182 ADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGL 237
M E D +++ TLI GL +EA M + T+ +V
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 238 GLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGW 293
G ++ + + + D + +ID K ++DA +F +M K + V +
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 294 NSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVR 353
+S+IS G +A + +M + + T + +I + A++ + +++
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 354 HGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQ 409
DI LV+ + R++ A+ +F+ M+ K +V+++N LI G+ + E
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 410 AIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMI 469
E+F +M ++ + VT+ ++ + G + ++F M D V P M Y+ ++
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILL 477
Query: 470 ELLGREGLLD---EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG--KFAAEKLYGME 524
+ L G L+ E F ++ + ++ ++ ++ G + G F + L G++
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 525 PGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
P + +Y +++ S L EA +LK +K G
Sbjct: 538 P-NVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 179/416 (43%), Gaps = 15/416 (3%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P T + I L L N+ EA+ L + + G ++ TY +VN
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--VTYGVVVNGLCKRGDTDLA 244
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
+ M + E D+ + N ++ + + DA LF +M + + V++ +LIS
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L G +++A + M E+ + TF ++ A G +++ +KR + D
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEALSIYL 314
F +L++ + ++ A+ +F+ M K V +N++I G+ E+ ++
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
EM G D T + +I+ ++A++ +V G DI+ + L+D G
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 375 RMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
++E A VFD M ++ ++ + +I G G+ + ++F + + V PN VT+
Sbjct: 485 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 544
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++S L + + + M D + P + Y +I R+G + LIR
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIR 599
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 193/451 (42%), Gaps = 19/451 (4%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY+ L+N I + G M+ G+EP + ++ +L+ + + DA L M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 185 PER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
E D +++ TLI GL +EA M + T+ +V G I
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 241 EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSI 296
++ + + + D + +ID K ++DA +F +M K + V ++S+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 297 ISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGF 356
IS G +A + +M + + T + +I + A++ H +++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 357 GSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI----SWNALIAGYGNHGQGEQAIE 412
DI L++ + R++ A+ +F+ M+ K+ ++N LI G+ + E E
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Query: 413 MFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELL 472
+F +M ++ + VT+ ++ + G + ++F M D V P M Y+ +++ L
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGL 405
Query: 473 GREGLLD---EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLG--KFAAEKLYGMEPGK 527
G L+ E F ++ + ++ ++ ++ G + G F + L G++P
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN- 464
Query: 528 LSSYVMLLNMYSSSGKLMEAAGVLKTLKRKG 558
+ +Y +++ S L EA +LK +K G
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 179/416 (43%), Gaps = 15/416 (3%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P T + I L L N+ EA+ L + + G ++ TY +VN I
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL--VTYGVVVNGLCKRGDIDLA 169
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
+ M + E D+ + N ++ + + DA LF +M + + V++ +LIS
Sbjct: 170 FNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
L G +++A + M E+ + TF ++ A G ++H +KR + D
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSIYL 314
F +LI+ + ++ A+ +F+ M K +N++I G+ E+ ++
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
EM G D T + +I+ ++A++ +V G DI+ + L+D G
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 375 RMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFL 430
++E A VFD M ++ ++ + +I G G+ + ++F + + V PN VT+
Sbjct: 410 KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYN 469
Query: 431 AVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++S L + + + M D + P + Y +I R+G + LIR
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIR 524
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 181/418 (43%), Gaps = 38/418 (9%)
Query: 98 LCN--RYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFE 155
LC+ +Y++A + I E+ G G STY ++N + +F M G
Sbjct: 458 LCSAGKYEKAFSV--IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 156 PDLYMMNRVLHMHVRCGLMLDARKLFADMPE----RDAVSWMTLISGLVDSGNYAEAFEQ 211
D+Y ++ + GL+ ARK F +M E + V++ LI + + + A E
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 212 FLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHS--CALKRGVGEDSFVA------- 262
F M E T++ ++ G +E QI C K D +
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635
Query: 263 -------CALIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEALS 311
AL+D + K +E+A+ + D M E + + ++++I G G +EA
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695
Query: 312 IYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYS 371
+ EM + G +T S +I ++ + A + + ++ + ++V T ++D
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 372 KWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHV 427
K G+ ++A + M K NV+++ A+I G+G G+ E +E+ E+M + V PN+V
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYV 815
Query: 428 TFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE-----GLLDE 480
T+ ++ C +G + + M + H A Y +IE +E GLLDE
Sbjct: 816 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA-GYRKVIEGFNKEFIESLGLLDE 872
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 182/443 (41%), Gaps = 57/443 (12%)
Query: 65 KIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGS 124
K+G + ++E + + P T I L + ++EAMD + +V
Sbjct: 282 KVGKWREALTLVETENFV-PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV--V 338
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY L+ C+ + + KRV M+ G P + N ++H + G A KL M
Sbjct: 339 TYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 185 PERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGR 244
+ + + + L+ G+ + C + D + ++ M+ A L I V
Sbjct: 399 VKCGHMPGYVVYNILI--GSICGDKDSLNC---DLLDLAEKAYSEMLAAGVVLNKINVS- 452
Query: 245 QIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQM------PEKSTVGWNSIIS 298
SF C G E A V +M P+ ST ++ +++
Sbjct: 453 --------------SFTRC-----LCSAGKYEKAFSVIREMIGQGFIPDTST--YSKVLN 491
Query: 299 GYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGS 358
E A ++ EM+ G D +T +I++ + +E A++ + G
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 359 DIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQGEQAIEMF 414
++V T L+ Y K ++ A +F+ ML + N+++++ALI G+ GQ E+A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 415 EQMLRERVI----------------PNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 458
E+M + + PN VT+ A+L S E ++ +MS +
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 670
Query: 459 KPRAMHYACMIELLGREGLLDEA 481
+P + Y +I+ L + G LDEA
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEA 693
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 150/392 (38%), Gaps = 65/392 (16%)
Query: 105 AMDLFEILELEGDGADVGGSTYDALVN----------VC------VGLRSIRGVKRVFGY 148
A +LFE + EG ++ TY AL++ C G + + V F
Sbjct: 572 ANELFETMLSEGCLPNI--VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQ 629
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGN 204
N P++ +L + + +ARKL M E + + + LI GL G
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 205 YAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
EA E M E T+++++ + ++ ++ S L+ + +
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLEMRDSG 320
+ID K G ++A + M EK + V + ++I G+ + G E L + M G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 321 AKIDQFTISIVIRICARLASL-------EHAKQAHAAL-------VRHGFGSDIVANTGL 366
+ T ++I C + +L E KQ H V GF + + + GL
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 367 VD---------FYS----------KWGRMEDARHV------FDRMLRKNVISWNALIAGY 401
+D F S K R+E A + F L ++N+LI
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL 433
+ E A ++F +M ++ VIP +F +++
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/530 (20%), Positives = 217/530 (40%), Gaps = 56/530 (10%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P+ +A +Y + L + +EL+G ++ T ++N R +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL--YTLSIMINCFCRCRKLCLAF 143
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGL 199
G +I G+EP+ + +++ G + +A +L M E D ++ TL++GL
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
SG AEA M E + T+ ++ G + ++ +R + D+
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLE 315
+ID K GS+++A +F++M K + + +N +I G+ G ++ + +
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M + T S++I + L A++ H ++ G D + T L+D + K
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 376 MEDARHVFDRMLRK---------------------------------------NVISWNA 396
++ A + D M+ K + +++N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
LI G+ G+ A E+F++M+ +V PN VT+ +L +G SE+ EIF + +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-S 502
Query: 457 KVKPRAMHYACMIELLGREGLLDEAFALIRSAP---VEPTKNMWVALLTACRMHGNLVLG 513
K++ Y +I + +D+A+ L S P V+P + ++ G L
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 514 KFAAEKLY--GMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTM 561
+ K+ G P +Y +L+ + G ++ +++ LKR G ++
Sbjct: 563 ELLFRKMEEDGHAPDGW-TYNILIRAHLGDGDATKSVKLIEELKRCGFSV 611
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 276 EDAQCVFDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIV 331
+DA +F M P + + ++ + S A + L++ +M G + +T+SI+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 332 IRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML---- 387
I R L A A +++ G+ + + + L++ GR+ +A + DRM+
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 388 RKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWE 447
+ ++I+ N L+ G G+ +A+ + ++M+ PN VT+ VL+ SG + E
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 448 IFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACRMH 507
+ M + +K A+ Y+ +I+ L + G LD AF L M + +T +
Sbjct: 250 LLRKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE--------MEMKGITTNIIT 300
Query: 508 GNLVLGKF--------AAEKLYGMEPGKLS----SYVMLLNMYSSSGKLMEAAGVLKTLK 555
N+++G F A+ L M K++ ++ +L++ + GKL EA + K +
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 556 RKGL 559
+G+
Sbjct: 361 HRGI 364
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/459 (20%), Positives = 189/459 (41%), Gaps = 65/459 (14%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P+ + I+ +R+ +AM + + ++ +G D+ Y++L+ +GL + +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI--FCYNSLI---IGLSKAKRM 503
Query: 143 KRVFGY---MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGL 199
+ M+ NG +P+ + + ++ A K +M E + L +GL
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 200 VD----SGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGV 255
++ G EA + M ++ G ++T+ ++ ++ +I +G+
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 256 GEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK--------------------------- 288
D F LI+ +SK G+++ A +FD+M E+
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 289 ------------STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICA 336
+ V + +II GY G EA ++ EM+ G D F + ++ C
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 337 RLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHV--------FDRMLR 388
RL +E A + G S L+++ K+G+ E V FDR +
Sbjct: 744 RLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 389 KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEI 448
N +++N +I G E A E+F QM ++P +T+ ++L+ Y + R E+
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG--YDKMGRRA-EM 859
Query: 449 F--YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
F + + ++P + Y+ +I +EG+ +A L+
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 191/462 (41%), Gaps = 53/462 (11%)
Query: 93 IEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISN 152
I+ L R ++A L ++E++ G + TY L++ + R+ K + M+S+
Sbjct: 284 IDGLCKIKRLEDAKSL--LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH 341
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEA 208
G YM + + + + G+M A+ LF M A ++ +LI G N +
Sbjct: 342 GINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQG 401
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
+E + M + T+ T+V+ G ++ I + G + + LI
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVG----WNSIISGYALRGYSEEALSIYLEMRDSGAKID 324
+ + DA V +M E+ +NS+I G + +EA S +EM ++G K +
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 325 QFTISIVI-------------------RICARLASL--------EHAKQ--------AHA 349
FT I R C L + E+ K+ A+
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581
Query: 350 ALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHG 405
++V G D T L++ K +++DA +F M K +V S+ LI G+ G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
++A +F++M+ E + PN + + +L SG E+ E+ MS + P A+ Y
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-KGLHPNAVTY 700
Query: 466 ACMIELLGREGLLDEAFALIRSAPVE---PTKNMWVALLTAC 504
+I+ + G L EAF L ++ P ++ L+ C
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 153/356 (42%), Gaps = 24/356 (6%)
Query: 100 NRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLY 159
++ +A ++F E+ G G +Y L+N L +++ +F M+ G P++
Sbjct: 606 DKVDDAEEIFR--EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 160 MMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCM 215
+ N +L R G + A++L +M + +AV++ T+I G SG+ AEAF F M
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 216 WEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSI 275
+ S + T+V L +E I K+G + ALI+ K G
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKT 782
Query: 276 EDAQCV--------FDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFT 327
E V FD+ + + V +N +I G E A ++ +M+++ T
Sbjct: 783 ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVIT 842
Query: 328 ISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML 387
+ ++ ++ + G D + + +++ + K G A + D+M
Sbjct: 843 YTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMF 902
Query: 388 RKNVI---------SWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLS 434
KN + + AL++G+ G+ E A ++ E M+R + IP+ T + +++
Sbjct: 903 AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 146/357 (40%), Gaps = 43/357 (12%)
Query: 270 SKCGSIEDAQCVFDQMPEKSTV----GWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQ 325
SK G +E A+ +FD M + + S+I GY + + +EM+ I
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP 417
Query: 326 FTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDR 385
+T V++ L+ A ++ G ++V T L+ + + R DA V
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 386 M----LRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGL 441
M + ++ +N+LI G + ++A +M+ + PN T+ A +S Y
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG--YIEA 535
Query: 442 SE-RGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVAL 500
SE + + R+ V P + +I ++G + EA + RS + +
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ-------GI 588
Query: 501 LTACRMHGNLVLGKFAAEKL------------YGMEPGKLSSYVMLLNMYSSSGKLMEAA 548
L + + L+ G F +K+ G+ P + SY +L+N +S G + +A+
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKAS 647
Query: 549 GVLKTLKRKGLTMLPTCSWIEVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHG 605
+ + +GLT P Y L G ++ EI +K L+DE+S G
Sbjct: 648 SIFDEMVEEGLT--PNVII-------YNMLLG--GFCRSGEI-EKAKELLDEMSVKG 692
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 125/321 (38%), Gaps = 52/321 (16%)
Query: 285 MPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
+P K T ++ +I G E+A S+ +EM G +D T S++I + + + A
Sbjct: 274 VPLKYT--YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI----SWNALIAG 400
K +V HG + SK G ME A+ +FD M+ +I ++ +LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 401 YGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSM-------- 452
Y Q E+ +M + ++ + T+ V+ SG + + I M
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 453 --------------------------SRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++ + P Y +I L + +DEA R
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA----R 507
Query: 487 SAPVEPTKNMWV--ALLTACRMHGNLVLGKFAAEKLYGMEP---GKLSSYVM---LLNMY 538
S VE +N A + G + +FA+ Y E G L + V+ L+N Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 539 SSSGKLMEAAGVLKTLKRKGL 559
GK++EA +++ +G+
Sbjct: 568 CKKGKVIEACSAYRSMVDQGI 588
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 172/378 (45%), Gaps = 18/378 (4%)
Query: 125 TYDALVN-VCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD 183
T+ +L+N C+G R + V M+ G +PD+ M ++ + G + A LF
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMV-NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 184 MPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL 239
M D V + +L++GL +SG + +A M + TF ++ A G
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNS 295
++++ ++ + + F +LI+ + G +++A+ +F M K V + S
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 296 IISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHG 355
+I+G+ ++A+ I+ EM G + T + +I+ ++ A++ + +V G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 356 FGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK-------NVISWNALIAGYGNHGQGE 408
+I L+ G+++ A +F+ M ++ N+ ++N L+ G +G+ E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+A+ +FE M + + +T+ ++ +G + +F S+ VKP + Y M
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP-SKGVKPNVVTYTTM 501
Query: 469 IELLGREGLLDEAFALIR 486
I L REGL EA L R
Sbjct: 502 ISGLFREGLKHEAHVLFR 519
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 139/326 (42%), Gaps = 13/326 (3%)
Query: 254 GVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP----EKSTVGWNSIISGYALRGYSEEA 309
GV D + L++ + + A +M E V + S+I+G+ L EEA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 310 LSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDF 369
+S+ +M + G K D + +I + + +A + +G D+V T LV+
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 370 YSKWGRMEDA----RHVFDRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
GR DA R + R ++ +VI++NALI + G+ A E++ +M+R + PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 426 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALI 485
T+ ++++ G + ++FY M P + Y +I + +D+A +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLM-ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 486 RSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGM----EPGKLSSYVMLLNMYSSS 541
+ + T + G + A E M P + +Y +LL+ +
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 542 GKLMEAAGVLKTLKRKGLTMLPTCSW 567
GK+ +A + + ++++ + + W
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIW 426
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 152/342 (44%), Gaps = 16/342 (4%)
Query: 65 KIGHVERKVPVLE--DAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVG 122
K GHV + + + + + ++P S + L R+++A L + DV
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV- 247
Query: 123 GSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFA 182
T++AL++ V + ++ MI P+++ +++ G + +AR++F
Sbjct: 248 -ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 183 DMPER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLG 238
M + D V++ +LI+G +A + F M ++ G + T+ T+++ +G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 239 LIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEKSTVG------ 292
V +++ S + RGV + L+ G ++ A +F+ M ++ G
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 293 -WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAAL 351
+N ++ G G E+AL ++ +MR I T +I+I+ + +++A +L
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 352 VRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVIS 393
G ++V T ++ + G +A HV R ++++ +S
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEA-HVLFRKMKEDGVS 527
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 145/390 (37%), Gaps = 52/390 (13%)
Query: 83 KPSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGV 142
+P S I L NR +EAM + + G DV Y +++ +
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV--VMYTTIIDSLCKNGHVNYA 196
Query: 143 KRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISG 198
+F M + G PD+ M +++ G DA L M +R D +++ LI
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 199 LVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGED 258
V G + +A E + M T+ +++ G ++ RQ+ +G D
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPD 316
Query: 259 SFVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYL 314
+LI+ + KC ++DA +F +M +K +T+ + ++I G+ G A ++
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFS 376
Query: 315 EMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH---GFGSDIVANTGLVDFYS 371
M G + T ++++ ++ A + + G +I L+
Sbjct: 377 HMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLC 436
Query: 372 KWGRMEDARHVFDRM---------------------------------------LRKNVI 392
G++E A VF+ M ++ NV+
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 393 SWNALIAGYGNHGQGEQAIEMFEQMLRERV 422
++ +I+G G +A +F +M + V
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/286 (19%), Positives = 128/286 (44%), Gaps = 15/286 (5%)
Query: 286 PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
P S + + +++ A + +++ ++ G D +T ++++ + + A
Sbjct: 68 PLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLAS 127
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAGY 401
+++ GF DIV T L++ + RME+A + ++M ++ +V+ + +I
Sbjct: 128 SFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 402 GNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPR 461
+G A+ +F+QM + P+ V + ++++ SG + M++ K+KP
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK-RKIKPD 246
Query: 462 AMHYACMIELLGREG-LLD--EAFALIRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAE 518
+ + +I+ +EG LD E + + + P + +L+ M G + A +
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV---DEARQ 303
Query: 519 KLYGMEPG----KLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
Y ME + +Y L+N + K+ +A + + +KGLT
Sbjct: 304 MFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 218/522 (41%), Gaps = 62/522 (11%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY+ ++ + +K + M NG P+ N +++ + + G + +A ++ M
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM 301
Query: 185 PER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGL- 239
+ D ++ LI+GL ++G+ E E M T+ T++ LGL
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361
Query: 240 --------------IEVGRQIHSCALKRGVGEDSFVACA-----LIDMYSKCGSIEDAQC 280
++ + H+ +LK E+ A L+DM+ I
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDI----- 416
Query: 281 VFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLAS 340
V ++++I Y G AL + EM G K++ T++ ++ +
Sbjct: 417 ----------VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 341 LEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNA 396
L+ A + + GF D V L+ + + ++E A ++D M + V ++N+
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 397 LIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDH 456
LI G +HG+ E A+E F+++ ++P+ TF +++ G E+ +E FY+ S H
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE-FYNESIKH 585
Query: 457 KVKPRAMHYACMIELLG--REGLLDEAF----ALIRSAPVEPT--KNMWVALLTACRMHG 508
KP +Y C I L G +EG+ ++A LI V+ M A ++
Sbjct: 586 SFKPD--NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKE 643
Query: 509 NLVLGKFAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTCSWI 568
L EK G+EP + +Y +++ GKL E +LK K +M +
Sbjct: 644 AYDLLSEMEEK--GLEPDRF-TYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQ-V 699
Query: 569 EVKKQPYAFLCGDKSHTQTKEIYQKVDNLMDEISRHGYIEEH 610
E +K P K T+ I +++DE+ G ++EH
Sbjct: 700 ETEKNPAT--SESKEELNTEAI--AYSDVIDELCSRGRLKEH 737
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 240 IEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK-----STVGWN 294
I R++ +K GV + L++ Y G +EDA + ++M + V +N
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 295 SIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRH 354
+I+ + +G + + L+M+ +G ++ T + ++ +L SL+ A Q + +
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 355 GFGSDIVANTGLVDFYSKWGRMEDARHVFDRM----LRKNVISWNALIAGYGNHGQGEQA 410
D+ L++ G M + + D M L+ +V+++N LI G G +A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 411 IEMFEQMLRERVIPNHVT 428
++ EQM + V N VT
Sbjct: 365 RKLMEQMENDGVKANQVT 382
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 213/501 (42%), Gaps = 31/501 (6%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
P+ C+ I A DLF+++E G D+ Y L++ +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL--IAYSTLIDGYFKAGMLGMGH 341
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM----PERDAVSWMTLISGL 199
++F + G + D+ + + + ++V+ G + A ++ M + V++ LI GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
G EAF + + + + T+++++ G + G ++ +K G D
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEALSIYLE 315
+ L+D SK G + A +M +S V +NS+I G+ +EAL ++
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 316 MRDSGAKIDQFTISIVIRI-CARLASLEHAK-----QAHAALVRHGFGSDIVANTGLVDF 369
M G K D T + V+R+ A +H K Q + R+ +DI ++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 581
Query: 370 YSKWGRMEDARHVFDRMLR----KNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPN 425
K R+EDA F+ ++ +++++N +I GY + + ++A +FE + PN
Sbjct: 582 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 641
Query: 426 HVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFAL- 484
VT ++ + + +F M+ + KP A+ Y C+++ + ++ +F L
Sbjct: 642 TVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 485 --IRSAPVEPTKNMWVALLTACRMHGNLVLGKFAAEKLYGMEPGKL----SSYVMLLNMY 538
++ + P+ + ++ G + A + KL +Y +L+ Y
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRV---DEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 539 SSSGKLMEAAGVLKTLKRKGL 559
G+L+EAA + + + R G+
Sbjct: 758 CKVGRLVEAALLYEHMLRNGV 778
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 191/455 (41%), Gaps = 72/455 (15%)
Query: 162 NRVLHMHVRCGLMLDARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFND 221
+R+L + + CG P + V++ TLI+G G AF+ F M + +
Sbjct: 271 SRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 222 GRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCV 281
++T++ G++ +G ++ S AL +GV D V + ID+Y K G + A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 282 FDQM----PEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICAR 337
+ +M + V + +I G G EA +Y ++ G + T S +I +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 338 LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRML----RKNVIS 393
+L + +++ G+ D+V LVD SK G M A +ML R NV+
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 394 WNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVL-------SACSYSGLSERGW 446
+N+LI G+ + ++A+++F M + P+ TF V+ + C + G
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGL 557
Query: 447 EIFYSMSRDH----------------------------------KVKPRAMHYACMIELL 472
++F M R+ K++P + Y MI
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 473 GREGLLDEA---FALIRSAPVEP-TKNMWVALLTACR---MHGNLVLGKFAAEKLYGMEP 525
LDEA F L++ P P T + + + C+ M G + + AEK G +P
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK--GSKP 675
Query: 526 GKLSSYVMLLNMYSSSGKLMEAAGVLKTLKRKGLT 560
+ +Y L++ +S S + + + + ++ KG++
Sbjct: 676 NAV-TYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 156/355 (43%), Gaps = 21/355 (5%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
TY +L++ ++R ++ MI G+ PD+ + ++ + GLML A + M
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Query: 185 PER----DAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLI 240
+ + V + +LI G + EA + F M TF T++R S
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAF 547
Query: 241 ------EVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE----KST 290
+G Q+ + + D V +I + KC IEDA F+ + E
Sbjct: 548 CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDI 607
Query: 291 VGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAA 350
V +N++I GY +EA I+ ++ + + T++I+I + + ++ A + +
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSI 667
Query: 351 LVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRK----NVISWNALIAGYGNHGQ 406
+ G + V L+D++SK +E + +F+ M K +++S++ +I G G+
Sbjct: 668 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR 727
Query: 407 GEQAIEMFEQMLRERVIPNHVTFLAVLSA-CSYSGLSERGWEIFYSMSRDHKVKP 460
++A +F Q + +++P+ V + ++ C L E + Y + VKP
Sbjct: 728 VDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA--LLYEHMLRNGVKP 780
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 173/415 (41%), Gaps = 15/415 (3%)
Query: 84 PSTSGLCSQIEKLALCNRYKEAMDLFEILELEGDGADVGGSTYDALVNVCVGLRSIRGVK 143
PS + A RY+ + + +EL G D+ ++ L++ +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL--YSFTILIHCFCRCSRLSFAL 126
Query: 144 RVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGL 199
V G M+ G+EP + +LH + DA L M E + V + TLI GL
Sbjct: 127 SVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL 186
Query: 200 VDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDS 259
+G A E M ++ T+ T++ G ++ +KR + D
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEKS----TVGWNSIISGYALRGYSEEALSIYLE 315
ALID++ K G++++AQ ++ +M + S V +NSII+G + G +A +
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 316 MRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGR 375
M G + T + +I + ++ + + GF +DI L+ Y + G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 376 MEDARHVF----DRMLRKNVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLA 431
+ A +F R + ++I+ L+ G +G+ E A+ F+ M V +
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 432 VLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIR 486
++ + E+ WE+F + + VKP A Y MI L + G EA LIR
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVE-GVKPDARTYTIMILGLCKNGPRREADELIR 480
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 135/323 (41%), Gaps = 16/323 (4%)
Query: 177 ARKLFADMPERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFATMVRASAG 236
A + F+D E+ L +G + S + +AF F M F ++ A+A
Sbjct: 31 AARAFSDYREK-------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATAN 83
Query: 237 LGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMP----EKSTVG 292
L E G+ D + LI + +C + A V +M E S V
Sbjct: 84 LRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVT 143
Query: 293 WNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALV 352
+ S++ G+ L +A S+ + M SG + + + +I + L A + +
Sbjct: 144 FGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME 203
Query: 353 RHGFGSDIVANTGLVDFYSKWGRMEDA----RHVFDRMLRKNVISWNALIAGYGNHGQGE 408
+ G G+D+V L+ GR DA R + R + +V+++ ALI + G +
Sbjct: 204 KKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 409 QAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACM 468
+A E++++M++ V PN+VT+ ++++ G + F M+ P + Y +
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA-SKGCFPNVVTYNTL 322
Query: 469 IELLGREGLLDEAFALIRSAPVE 491
I + ++DE L + E
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCE 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/423 (17%), Positives = 171/423 (40%), Gaps = 52/423 (12%)
Query: 153 GFEPDLYMMNRVLHMHVRCGLMLDARKLFADMP----ERDAVSWMTLISGLVDSGNYAEA 208
G DLY ++H RC + A + M E V++ +L+ G +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 209 FEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDM 268
F + M + + + T++ G + + ++ + K+G+G D
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGAD---------- 210
Query: 269 YSKCGSIEDAQCVFDQMPEKSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTI 328
V +N++++G G +A + +M D T
Sbjct: 211 ---------------------VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTF 249
Query: 329 SIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLR 388
+ +I + + +L+ A++ + +++ + V +++ GR+ DA+ FD M
Sbjct: 250 TALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS 309
Query: 389 K----NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSER 444
K NV+++N LI+G+ ++ +++F++M E + T+ ++ G
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Query: 445 GWEIF-YSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTA 503
+IF + +SR +V P + + ++ L G ++ AL++ + ++ +
Sbjct: 370 ALDIFCWMVSR--RVTPDIITHCILLHGLCVNGEIES--ALVKFDDMRESEKYIGIVAYN 425
Query: 504 CRMHGNLVLGK-------FAAEKLYGMEPGKLSSYVMLLNMYSSSGKLMEAAGVLKTLKR 556
+HG K F + G++P + +M+L + +G EA +++ +K
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL-CKNGPRREADELIRRMKE 484
Query: 557 KGL 559
+G+
Sbjct: 485 EGI 487
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/528 (23%), Positives = 224/528 (42%), Gaps = 69/528 (13%)
Query: 66 IGHVERKVPVLEDAHVMK---------PSTSGLCSQIEKLALCNRYKEAMDLFEILELEG 116
I H R VL+ V K P L + + L + AM+LF + G
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVG 222
Query: 117 DGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLD 176
DV Y ++ L+ + K + +M + G + ++ N ++ + + +
Sbjct: 223 IRPDV--YIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWE 280
Query: 177 ARKLFADMPERD----AVSWMTLISGLVDSGNYA---EAFEQFLCMWEEFNDGRSRTFAT 229
A + D+ +D V++ TL+ GL + E ++ LC+ F+ + ++
Sbjct: 281 AVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCL--RFSPSEA-AVSS 337
Query: 230 MVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPE-- 287
+V G IE + + GV + FV ALID K +A+ +FD+M +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 288 --KSTVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAK 345
+ V ++ +I + RG + ALS EM D+G K+ + + +I H K
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN--------GHCK 449
Query: 346 QAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVFDRMLRKNVISWNALIAGYGNHG 405
FG DI A G + + ++ L V+++ +L+ GY + G
Sbjct: 450 ----------FG-DISAAEGFM------------AEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 406 QGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHY 465
+ +A+ ++ +M + + P+ TF +LS +GL ++F M+ + VKP + Y
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTY 545
Query: 466 ACMIELLGREGLLDEAFALIRSAPVEPTKNMWVALLTACR--MHGNLVLGKFAAEKLY-- 521
MIE EG + +AF ++ E T+ V + R +HG + G+ + K++
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLK----EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 522 GMEPGKLS----SYVMLLNMYSSSGKLMEAAGVLKTLKRKGLTMLPTC 565
G+ G Y LL+ + GKL EA V + + ++G+ + C
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 177/437 (40%), Gaps = 23/437 (5%)
Query: 53 SSMEQGLRPKPKKIGHVERKVPVLEDAHVMKPSTSGLCSQIEKLALCNRYKEAMDLFEIL 112
SS+ +GLR K KI V + D V P+ + I+ L ++ EA LF+
Sbjct: 336 SSLVEGLR-KRGKIEEALNLVKRVVDFGV-SPNLFVYNALIDSLCKGRKFHEAELLFD-- 391
Query: 113 ELEGDGADVGGSTYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCG 172
+ G TY L+++ + G M+ G + +Y N +++ H + G
Sbjct: 392 RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFG 451
Query: 173 LMLDARKLFADMP----ERDAVSWMTLISGLVDSGNYAEAFEQFLCMWEEFNDGRSRTFA 228
+ A A+M E V++ +L+ G G +A + M + TF
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 229 TMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACALIDMYSKCGSIEDAQCVFDQMPEK 288
T++ GLI ++ + + V + +I+ Y + G + A +M EK
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 289 ----STVGWNSIISGYALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHA 344
T + +I G L G + EA + ++++ + ++ R LE A
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 345 KQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDARHVF-------DRMLRKNVISWNAL 397
+V+ G D+V L+D K +D + F DR L+ + + + ++
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKH---KDRKLFFGLLKEMHDRGLKPDDVIYTSM 688
Query: 398 IAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHK 457
I G ++A +++ M+ E +PN VT+ AV++ +G E+ S +
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA-EVLCSKMQPVS 747
Query: 458 VKPRAMHYACMIELLGR 474
P + Y C +++L +
Sbjct: 748 SVPNQVTYGCFLDILTK 764
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 133/333 (39%), Gaps = 59/333 (17%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFAD-----MPERDAVSWMTLISGLVDSG 203
M G PD Y ++H G +A K+F D E + + + L+ G G
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Query: 204 NYAEAFEQFLCMWEEFNDGRSRTFATMVRASAGLGLIEVGRQIHSCALK----RGVGEDS 259
EA M + D + ++ S L R++ LK RG+ D
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGS----LKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 260 FVACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISGYALRGYSEEALSIYLE 315
+ ++ID SK G ++A ++D M + + V + ++I+G G+ EA + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 316 MRDSGAKIDQFTISIVIRICAR-LASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWG 374
M+ + +Q T + I + ++ A + H A+++ G ++ L+ + + G
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQG 801
Query: 375 RMEDARHVFDRML---------------------------------------RKNVISWN 395
R+E+A + RM+ R + +++N
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 396 ALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVT 428
LI G G+ +A E+ +MLR+ +IPN+ T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/487 (21%), Positives = 219/487 (44%), Gaps = 56/487 (11%)
Query: 125 TYDALVNVCVGLRSIRGVKRVFGYMISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADM 184
T+ A++++ + + V+ V M N D + + ++ M+V GL++ A+ LF
Sbjct: 412 THRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Query: 185 PERDAVSWMTLISGLVD----SGNYAEAFEQFL---CMWEEFND-----------GRSR- 225
+ D V T ++ ++D G + EA F M + ND G+++
Sbjct: 472 -QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKL 530
Query: 226 ---------------------TFATMVRASAGLGLIEVGRQIHSCALKRGVGEDSFVACA 264
T+ ++ + AG+ L++ ++I + L G A
Sbjct: 531 HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAA 590
Query: 265 LIDMYSKCGSIEDAQCVFDQMPEKSTVGWN-----SIISGYALRGYSEEALSIYLEMRDS 319
+I Y + G + DA +++ M EK+ V N S+I+G+A G EEA+ + M +
Sbjct: 591 MIASYVRLGLLSDAVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Query: 320 GAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSDIVANTGLVDFYSKWGRMEDA 379
G + + ++ +I+ +++ LE A++ + + G D+ A+ ++ + G + +A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 380 RHVFDRMLRK---NVISWNALIAGYGNHGQGEQAIEMFEQMLRERVIPNHVTFLAVLSAC 436
+F+ + K +VIS+ ++ Y G ++AIE+ E+M ++ + +F V++
Sbjct: 710 ESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACY 769
Query: 437 SYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGREGLLDEAFALIRSAPVEPTKNM 496
+ G E+F+ M + K+ + + LL + G+ EA + +++A E K +
Sbjct: 770 AADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNE-AKPL 828
Query: 497 WVALLTACRMHGNLVLGKFAAEKLYGMEPGKLS----SYVMLLNMYSSSGKLMEAAGVLK 552
+TA + + L +A E + G++ +Y ++ YS+SG + A
Sbjct: 829 ATPAITAT-LFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYM 887
Query: 553 TLKRKGL 559
++ KGL
Sbjct: 888 RMQEKGL 894
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 182/451 (40%), Gaps = 45/451 (9%)
Query: 149 MISNGFEPDLYMMNRVLHMHVRCGLMLDARKLFADMPER----DAVSWMTLISGLVDSGN 204
M NG P ++ ++ + GL+ +A M +R D V+ T++ +SG
Sbjct: 171 MAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGE 230
Query: 205 YAEAFEQFLCMW------------EEFNDGRSRTFATMVRASAGLGLIEVG-RQIHSCAL 251
+ A ++F W ++F S ++ + L +VG R +L
Sbjct: 231 FDRA-DRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL 289
Query: 252 KRGVGEDSF--------VACALIDMYSKCGSIEDAQCVFDQMPEK----STVGWNSIISG 299
G DS LID+Y K G + DA +F +M + TV +N++I
Sbjct: 290 HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHT 349
Query: 300 YALRGYSEEALSIYLEMRDSGAKIDQFTISIVIRICARLASLEHAKQAHAALVRHGFGSD 359
G+ EA S+ +M + G D T +I++ + A +E A + + + + G D
Sbjct: 350 CGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPD 409
Query: 360 IVANTGLVDFYSKWGRMEDARHVFDRMLRKNVI----SWNALIAGYGNHGQGEQAIEMFE 415
V + ++ + + + V M R ++ S ++ Y N G QA +FE
Sbjct: 410 TVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFE 469
Query: 416 QMLRERVIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMIELLGRE 475
+ + V+ + T AV+ + GL +FY + + Y MI+ G+
Sbjct: 470 RFQLDCVL-SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKA 528
Query: 476 GLLDEAFALIRSA------PVEPTKNMWVALLTACRMHGNLVLGKFAAEKL-YGMEPGKL 528
L ++A +L + P E T N +L + + AE L G +PG
Sbjct: 529 KLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDE--AQRILAEMLDSGCKPG-C 585
Query: 529 SSYVMLLNMYSSSGKLMEAAGVLKTLKRKGL 559
+Y ++ Y G L +A + + +++ G+
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGV 616