Miyakogusa Predicted Gene

Lj1g3v2964810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2964810.1 tr|G7L5A6|G7L5A6_MEDTR Receptor-kinase like
protein OS=Medicago truncatula GN=MTR_7g013350 PE=4
SV=1,60.71,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.29765.1
         (87 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G35710.1 | Symbols:  | Protein kinase family protein with leu...    72   7e-14
AT4G08850.1 | Symbols:  | Leucine-rich repeat receptor-like prot...    69   7e-13
AT2G01210.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    50   4e-07
AT2G33170.1 | Symbols:  | Leucine-rich repeat receptor-like prot...    49   5e-07
AT1G17230.1 | Symbols:  | Leucine-rich receptor-like protein kin...    48   1e-06
AT3G24240.1 | Symbols:  | Leucine-rich repeat receptor-like prot...    46   6e-06

>AT1G35710.1 | Symbols:  | Protein kinase family protein with
            leucine-rich repeat domain | chr1:13220940-13224386
            FORWARD LENGTH=1120
          Length = 1120

 Score = 72.0 bits (175), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 54/83 (65%)

Query: 5    ELAYTMAVSKKCDVYSFRVVALETLVGRHPKEILSALQSTSNEGITLCEILDPRLPAPKM 64
            E AYTM V++KCDVYSF V+ LE ++G+HP +++S+L S+  E ++L  I D R+  P+ 
Sbjct: 1026 EFAYTMKVTEKCDVYSFGVLILELIIGKHPGDLVSSLSSSPGEALSLRSISDERVLEPRG 1085

Query: 65   NVLDDIVQVAIVTFSCLNPNPSS 87
               + ++++  +   CL  NP S
Sbjct: 1086 QNREKLLKMVEMALLCLQANPES 1108


>AT4G08850.1 | Symbols:  | Leucine-rich repeat receptor-like protein
            kinase family protein | chr4:5636693-5640496 REVERSE
            LENGTH=1045
          Length = 1045

 Score = 68.9 bits (167), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 5    ELAYTMAVSKKCDVYSFRVVALETLVGRHPKEILSALQSTSNEG-ITLCEILDPRLPAPK 63
            ELAY M V++KCDVYSF V+ LE + G HP +++S L S+  +  ++L  I D RLP P 
Sbjct: 950  ELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPT 1009

Query: 64   MNVLDDIVQVAIVTFSCLNPNPSS 87
              + ++++++  V   CL+ +P +
Sbjct: 1010 PEIKEEVLEILKVALLCLHSDPQA 1033


>AT2G01210.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr2:119509-121734 REVERSE LENGTH=716
          Length = 716

 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 9/81 (11%)

Query: 13  SKKCDVYSFRVVALETLVGRHPK--------EILSALQSTSNEGITLCEILDPRLPAPKM 64
           S+K DVYS+ ++ LE + GR P         +++  +Q    E   LC++LDP L AP+ 
Sbjct: 616 SQKWDVYSYGIILLELIAGRSPAVEVGTSEMDLVRWVQVCIEEKKPLCDVLDPCL-APEA 674

Query: 65  NVLDDIVQVAIVTFSCLNPNP 85
              D+IV V  +  SC+N +P
Sbjct: 675 ETEDEIVAVLKIAISCVNSSP 695


>AT2G33170.1 | Symbols:  | Leucine-rich repeat receptor-like protein
            kinase family protein | chr2:14056371-14059829 REVERSE
            LENGTH=1124
          Length = 1124

 Score = 49.3 bits (116), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 5    ELAYTMAVSKKCDVYSFRVVALETLVGRHPKEILSA---LQSTSNEGIT----LCEILDP 57
            E AYTM V++KCD+YSF VV LE L G+ P + L     L + +   I       EILDP
Sbjct: 998  EYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLATWTRNHIRDHSLTSEILDP 1057

Query: 58   RLPAPKMNV-LDDIVQVAIVTFSCLNPNPS 86
             L   + +V L+ ++ V  +   C   +PS
Sbjct: 1058 YLTKVEDDVILNHMITVTKIAVLCTKSSPS 1087


>AT1G17230.1 | Symbols:  | Leucine-rich receptor-like protein kinase
            family protein | chr1:5891375-5894855 FORWARD LENGTH=1101
          Length = 1101

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 5    ELAYTMAVSKKCDVYSFRVVALETLVGRHP-------KEILSALQSTSNEGITLCEILDP 57
            E AYTM V++KCD+YSF VV LE + G+ P        ++++ ++ +    I   E+ D 
Sbjct: 972  EYAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTIEMFDA 1031

Query: 58   RLPAPKMNVLDDIVQVAIVTFSCLNPNPSS 87
            RL       + ++  V  +   C + +P+S
Sbjct: 1032 RLDTNDKRTVHEMSLVLKIALFCTSNSPAS 1061


>AT3G24240.1 | Symbols:  | Leucine-rich repeat receptor-like protein
            kinase family protein | chr3:8780551-8784150 FORWARD
            LENGTH=1141
          Length = 1141

 Score = 45.8 bits (107), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 16/91 (17%)

Query: 5    ELAYTMAVSKKCDVYSFRVVALETLVGRHPKEILSALQSTSNEGITLC----------EI 54
            E  Y+M +++K DVYS+ VV LE L G+ P      +  T  EGI L           E+
Sbjct: 966  EYGYSMKITEKSDVYSYGVVVLEVLTGKQP------IDPTVPEGIHLVDWVRQNRGSLEV 1019

Query: 55   LDPRLPAPKMNVLDDIVQVAIVTFSCLNPNP 85
            LD  L +      D+++QV      C+N +P
Sbjct: 1020 LDSTLRSRTEAEADEMMQVLGTALLCVNSSP 1050