Miyakogusa Predicted Gene
- Lj1g3v2953420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2953420.1 Non Chatacterized Hit- tr|D8QV64|D8QV64_SELML
Putative uncharacterized protein OS=Selaginella
moelle,20.78,3e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.29744.1
(495 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 498 e-141
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 145 5e-35
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 6e-34
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 140 2e-33
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 6e-33
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 1e-32
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 9e-32
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 133 3e-31
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 5e-31
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 130 3e-30
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 129 5e-30
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 8e-30
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 126 3e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 4e-29
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 7e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 118 8e-27
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 1e-25
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 4e-25
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 112 4e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 5e-25
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 8e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 4e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 4e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 9e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 92 6e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 92 6e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 86 5e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 85 9e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 6e-16
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 82 1e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 78 1e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 1e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 74 2e-13
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 73 4e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 1e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 1e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 1e-12
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 1e-12
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 70 4e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 69 1e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 1e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 1e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 65 1e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 64 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 2e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 64 3e-10
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 4e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 9e-10
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 62 1e-09
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 60 3e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 56 5e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 7e-08
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 56 7e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 55 9e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 9e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 1e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 53 5e-07
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 53 6e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 52 8e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 1e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 2e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 50 3e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 247/452 (54%), Positives = 333/452 (73%), Gaps = 3/452 (0%)
Query: 31 NDPPFPDQXXXXXXXXXXXXXXISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPP 90
N PFP+ +S V VLGRLFA+HSNGLKALEFF ++L S+S P
Sbjct: 42 NGHPFPNHPIQPILAKHIPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSP 101
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
+ SFE TLHIL RMRYFD+AW L+ E + +P+L++ K+MSI+L KIAK+ S+E+TL+
Sbjct: 102 TSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEA 161
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGF 210
F +ME+++F ++FG DEFN+LL+AFC++R+MKEARS+F K+ SRF+PD K+MNILLLGF
Sbjct: 162 FVKMEKEIF-RKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGF 220
Query: 211 KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTI 270
KE+GDVT+ ELFYHEMVKRGF P++VTY IRID +CKK FG+ LRL E+M+R F T+
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 271 ETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDE 330
+ +TTLIHG+G+ +N KARQLF+EI R L D G YNAL+++L++ D+ A+ +M E
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 331 MIEKRVELDGVTYHTMFLGLMRST--GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
M EK +E D VT+H+MF+G+M+S G GV E YQKM +R+ VP+T T+VMLMK FC N
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
++L L LW Y++EKGYCPH HAL+LL T LC+R + ++AFECS Q +ERGR +S +
Sbjct: 401 GEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVY 460
Query: 449 LMLERFLLQSGDIDKLKELDQMIKNLLSVLPP 480
MLE L + ++ KL+EL + I+ L S LPP
Sbjct: 461 RMLETSLSSNNELKKLEELKEEIQKLHSFLPP 492
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 224/427 (52%), Gaps = 5/427 (1%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S L++ VL R+ SH N ++ LEF+ + S S + L+IL R R FD+ W
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIW 128
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
LL ET R SLI+ + M ++L ++AK S T++ F + + V F T FN L
Sbjct: 129 ELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNAL 186
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
L+ C ++ M +AR+V+ + +F PD ++ NILL G+K S + + EM +G
Sbjct: 187 LRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFE---EMKGKGLK 243
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD VTYN ID YCK +L+++M + P + T TT+I G G++ KAR++
Sbjct: 244 PDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREV 303
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
E+ D YNA I ++ + A L+DEM++K + + TY+ F L
Sbjct: 304 LKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSL 363
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
+ + ELY +M +P T++ + L+K F ++ ++D+++ LW +V KG+ ++
Sbjct: 364 ANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLV 423
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
D+L+ LC +V EA +C +M+E+G S SF ++ + + D++ L Q +
Sbjct: 424 SDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMA 483
Query: 473 NLLSVLP 479
+ +P
Sbjct: 484 IFSTEIP 490
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S +L+E VL +L + G+ AL F + + + ++ + L +++ F W
Sbjct: 92 LSPALIEEVLKKL---SNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIW 148
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
L+ + L++ + +++ + A+ + ++ + F +MEE G + + +FN +
Sbjct: 149 SLVDDM--KAKKLLSKETFALISRRYARARKVKEAIGAFHKMEE---FGFKMESSDFNRM 203
Query: 173 LKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
L R + +A+ VF KM RF PD KS ILL G+ + ++ V+ EM GF
Sbjct: 204 LDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGF 263
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
PD V Y I I+ +CK ++ + +R EME+R P+ +LI+G G + A +
Sbjct: 264 EPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 323
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
F S ++ YNAL+ A S+ +E A +DEM K V + TY + L+
Sbjct: 324 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLI 383
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
R + E+YQ M+ P T ++++ FC RLD+++ +W+ + KG P H
Sbjct: 384 RMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMH 440
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
LIT LC ++ EA E +ML+ G F L++ LL G DK+ +L
Sbjct: 441 MFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 202/424 (47%), Gaps = 9/424 (2%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S +VE+VL R + GL FF ++ S ++ M + ++R + W
Sbjct: 98 VSQEVVEDVLNRF---RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMW 154
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
L+ A ++ ++ I++ K A+ Q ++ + F ME+ FN L
Sbjct: 155 DLI--NAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVA---FNGL 209
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
L A C + +++A+ VF M RF+PD+K+ +ILL G+ + ++ + EM+ G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD VTY+I +D CK GR + L ++ M+ PT + L+H G +A
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
F E+ + D V+N+LI A ++ +++ ++ EM K V + + + + L+
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
+ ++++KM + P T M++K FC+ ++ + +W Y+ +KG P H
Sbjct: 390 RGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+LI GLC +A ++M+E G S +F L + L++ D LK L++ +
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMN 508
Query: 473 NLLS 476
L++
Sbjct: 509 VLVN 512
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 213/436 (48%), Gaps = 17/436 (3%)
Query: 53 ISTSLVENVLGRLFASHSNGL---KALEFFNFTL----HHSQSPPSHVSFEMTLHILTRM 105
+S S+V V+ + S +G+ ++L FFN+ + +SP H EM + + ++
Sbjct: 109 VSPSVVRCVIEKC-GSVRHGIPLHQSLAFFNWATSRDDYDHKSP--HPYNEM-IDLSGKV 164
Query: 106 RYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFG 165
R FD AW L+ + ++ I+++ +I++ + + + + F RME+ V +
Sbjct: 165 RQFDLAWHLI-DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIA 223
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
F++++ +R+ EA+S F + RF PD L+ G+ +G+++ E + E
Sbjct: 224 ---FSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKE 280
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M G P+ TY+I ID C+ G+ + +M P T L+
Sbjct: 281 MKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGR 340
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
K Q++N++ DT YN LI A R +++E+A+ +++ MI+K+ E++ T++T
Sbjct: 341 TEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNT 400
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+F + + + G +Y KM + P T T +LM+ F + D+ L + + +K
Sbjct: 401 IFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS-FLMLERFLLQSGDIDKL 464
P+ + LL+T C G + A++ K+M+E + S + M+ L ++G + K
Sbjct: 461 VEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKH 520
Query: 465 KEL-DQMIKNLLSVLP 479
+EL ++MI+ L P
Sbjct: 521 EELVEKMIQKGLVARP 536
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 189/402 (47%), Gaps = 19/402 (4%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNF-TLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+ +LV +VL RL+ ++G KAL+FF+F HH + SF++ + I R+ W
Sbjct: 55 TPNLVNSVLKRLW---NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVW 111
Query: 113 MLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN 170
L+ + R PS K +I+ + A + + F M E G FN
Sbjct: 112 SLIHRMRSLRIGPSP---KTFAIVAERYASAGKPDKAVKLFLNMHEH---GCFQDLASFN 165
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
+L C +++++A +F + RFS DT + N++L G+ EMV+RG
Sbjct: 166 TILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
+P+ TYN + + + G+ EM++R + T TT++HG G+ +AR
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRAR 285
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+F+E+ ++ YNA+I L + ++E+A+ + +EM+ + E + TY+ + GL
Sbjct: 286 NVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGL 345
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
+ EL Q+M P +T M+++Y+ + ++ +L L+ + P+
Sbjct: 346 FHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL 405
Query: 411 HALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
++LI+G+ R + S+ M+ G A L L+
Sbjct: 406 DTYNILISGMFVRKR-------SEDMVVAGNQAFAKEILRLQ 440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
R P K+ I+ + +G + M + G D ++N +D CK R
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
L + R V T+ T +++G +++ KA ++ E+ R + + YN ++
Sbjct: 181 YELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
R+ I A EM ++ E+D VTY T+ G + I+ ++ +M + +P
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T +++ C+ ++ ++ ++ +V +GY P+ ++LI GL G+ E +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 435 QMLERGRHMSAASFLMLERFLLQSGDIDK 463
+M G + ++ M+ R+ + +++K
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
H M P T+ I + Y G+ ++L M + + T++
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
+ KA +LF + R VDT YN ++ K AL ++ EM+E+ + + TY
Sbjct: 175 KRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+TM G R+ I E + +M +R+ T ++ F + + ++++ ++
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+G P + +I LC + V A ++M+ RG + ++ +L R L +G+ +
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 464 LKELDQMIKN 473
+EL Q ++N
Sbjct: 354 GEELMQRMEN 363
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 172/385 (44%), Gaps = 6/385 (1%)
Query: 56 SLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLL 115
L+E VL R + + G + FF + + S ++ + IL++MR F W L+
Sbjct: 114 GLIERVLNRCGDAGNLGYR---FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLI 170
Query: 116 QETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKA 175
+E + +P LI + +++ + A + ++ M + F E+ F LL A
Sbjct: 171 EEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYV---FGCLLDA 227
Query: 176 FCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
C +K+A +F M RF + + LL G+ G + + +M + GF PD
Sbjct: 228 LCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDI 287
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
V Y + Y G+ D LL +M RR F P T LI V +A ++F E
Sbjct: 288 VDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ D Y AL++ + I+ ++D+MI+K + +TY + + +
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES 407
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
E EL +KM Q + P ++++ C+ + ++ LWN + E G P +
Sbjct: 408 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 467
Query: 416 LITGLCSRGQVHEAFECSKQMLERG 440
+I GL S+G + EA + K+M+ RG
Sbjct: 468 MINGLASQGCLLEASDHFKEMVTRG 492
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 9/354 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQSFEDT 147
P +S+ ++ R DK W L++ R P+ ++ +L +I K E+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
R G T + L+ FC + ++ A F +M SR +PD + +
Sbjct: 339 FSEMIRQ------GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ GF + GD+ +HEM +G PD+VT+ I+ YCK G D R+ M +
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TTLI G + A +L +E+ L + YN+++ L +S +IE A+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
L+ E + D VTY T+ +S ++ E+ ++M + P T +LM FC
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ L+ L N+++ KG P+A + L+ C R + A K M RG
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 158 VFVGREFGTDE--FNVLLKAFCSQRQMKEARSVFGKMV---------------SRFSPD- 199
V+ +++G+D F+V + ++EAR VF KM+ +R S D
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 200 --TKSMNILLLGFKESG---DVTSVELFYHEMVK----------------RGFSPDNVTY 238
T + I+ F E G +V S + H + + +G++PD ++Y
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
+ ++ YC+ G +L+E M+R+ P ++I + +A + F+E+
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ ++ DT VY LI + DI +A EM + + D +TY + G + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
+L+ +M + P + T L+ +C+ + + + N++++ G P+ LI
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 419 GLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
GLC G + A E +M + G + ++ + L +SG+I++ +L
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 8/355 (2%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P ++T A+ I+ + D ++ + E G E + F L+ +C M
Sbjct: 384 PDVLTYTAI------ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 183 KEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
K+A V M+ + SP+ + L+ G + GD+ S HEM K G P+ TYN
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
++ CK G + ++L+ E E T TTL+ KA+++ E+ + L
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+N L+ +E L++ M+ K + + T++++ ++ +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
+Y+ M R P +T L+K C+ + + L+ + KG+ +LI G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 422 SRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE-LDQMIKNLL 475
R + EA E QM G F + D + + +D++I+N L
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYL 732
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 167/386 (43%), Gaps = 43/386 (11%)
Query: 125 LITLKAMSIMLSKIAK--YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
++++ + ++ L++++K Y++ + FR E VG + +N+++ C ++
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKT-ATAIIVFREFPE---VGVCWNVASYNIVIHFVCQLGRI 262
Query: 183 KEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSV---------------------- 219
KEA + M + ++PD S + ++ G+ G++ V
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 220 -------------ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
E + EM+++G PD V Y ID +CK+G + EM R
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T T +I G + + +A +LF+E+ + L D+ + LI ++ ++ A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ + MI+ + VTY T+ GL + ++ +EL +M + P T ++ C
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
++ ++ ++ L G L+ C G++ +A E K+ML +G +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 447 SF-LMLERFLLQSGDIDKLKELDQMI 471
+F +++ F L D K L+ M+
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 12/281 (4%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
S + E + G A H A N + SP + V++ + L + D A
Sbjct: 421 SVTFTELINGYCKAGHMK--DAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANE 477
Query: 114 LLQETART--HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV 171
LL E + P++ T ++ ++ + K + E+ + E G T +
Sbjct: 478 LLHEMWKIGLQPNIFTYNSI---VNGLCKSGNIEEAVKLVGEFEA---AGLNADTVTYTT 531
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L+ A+C +M +A+ + +M+ + P + N+L+ GF G + E + M+ +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
+P+ T+N + YC + + ++M R P +T L+ G +N +A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
LF E+ + V Y+ LI L+ K A + D+M
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 9/354 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQSFEDT 147
P +S+ ++ R DK W L++ R P+ ++ +L +I K E+
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
R G T + L+ FC + ++ A F +M SR +PD + +
Sbjct: 339 FSEMIRQ------GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ GF + GD+ +HEM +G PD+VT+ I+ YCK G D R+ M +
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TTLI G + A +L +E+ L + YN+++ L +S +IE A+
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
L+ E + D VTY T+ +S ++ E+ ++M + P T +LM FC
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ L+ L N+++ KG P+A + L+ C R + A K M RG
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 154/349 (44%), Gaps = 39/349 (11%)
Query: 158 VFVGREFGTDE--FNVLLKAFCSQRQMKEARSVFGKMV---------------SRFSPD- 199
V+ +++G+D F+V + ++EAR VF KM+ +R S D
Sbjct: 165 VYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC 224
Query: 200 --TKSMNILLLGFKESG---DVTSVELFYHEMVK----------------RGFSPDNVTY 238
T + I+ F E G +V S + H + + +G++PD ++Y
Sbjct: 225 YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY 284
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
+ ++ YC+ G +L+E M+R+ P ++I + +A + F+E+
Sbjct: 285 STVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIR 344
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ ++ DT VY LI + DI +A EM + + D +TY + G + +
Sbjct: 345 QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
+L+ +M + P + T L+ +C+ + + + N++++ G P+ LI
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 419 GLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
GLC G + A E +M + G + ++ + L +SG+I++ +L
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 8/355 (2%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P ++T A+ I+ + D ++ + E G E + F L+ +C M
Sbjct: 384 PDVLTYTAI------ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHM 437
Query: 183 KEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
K+A V M+ + SP+ + L+ G + GD+ S HEM K G P+ TYN
Sbjct: 438 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 497
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
++ CK G + ++L+ E E T TTL+ KA+++ E+ + L
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+N L+ +E L++ M+ K + + T++++ ++ +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
+Y+ M R P +T L+K C+ + + L+ + KG+ +LI G
Sbjct: 618 IYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 422 SRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE-LDQMIKNLL 475
R + EA E QM G F + D + + +D++I+N L
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYL 732
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 167/386 (43%), Gaps = 43/386 (11%)
Query: 125 LITLKAMSIMLSKIAK--YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
++++ + ++ L++++K Y++ + FR E VG + +N+++ C ++
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKT-ATAIIVFREFPE---VGVCWNVASYNIVIHFVCQLGRI 262
Query: 183 KEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSV---------------------- 219
KEA + M + ++PD S + ++ G+ G++ V
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 220 -------------ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
E + EM+++G PD V Y ID +CK+G + EM R
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI 382
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T T +I G + + +A +LF+E+ + L D+ + LI ++ ++ A
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ + MI+ + VTY T+ GL + ++ +EL +M + P T ++ C
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
++ ++ ++ L G L+ C G++ +A E K+ML +G +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 447 SF-LMLERFLLQSGDIDKLKELDQMI 471
+F +++ F L D K L+ M+
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWML 588
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 117/281 (41%), Gaps = 12/281 (4%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
S + E + G A H A N + SP + V++ + L + D A
Sbjct: 421 SVTFTELINGYCKAGHMK--DAFRVHNHMIQAGCSP-NVVTYTTLIDGLCKEGDLDSANE 477
Query: 114 LLQETART--HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV 171
LL E + P++ T ++ ++ + K + E+ + E G T +
Sbjct: 478 LLHEMWKIGLQPNIFTYNSI---VNGLCKSGNIEEAVKLVGEFEA---AGLNADTVTYTT 531
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L+ A+C +M +A+ + +M+ + P + N+L+ GF G + E + M+ +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
+P+ T+N + YC + + ++M R P +T L+ G +N +A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
LF E+ + V Y+ LI L+ K A + D+M
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 175/389 (44%), Gaps = 11/389 (2%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
S LV +L R+ ++ A FF + S + + IL +MR FD AW
Sbjct: 126 SNELVVEILSRV---RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWT 182
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
L+ E + PSL+ + + IM+ K ++ F + E G D+F LL
Sbjct: 183 LIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKR---FKLEMGIDDFQSLL 239
Query: 174 KAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKES-GDVTSVELFYHEMVKRGFS 232
A C + + +A + ++ D KS NI+L G+ G E + EM G
Sbjct: 240 SALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVK 299
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
D V+Y+ I Y K G L+L + M++ P + ++H +AR L
Sbjct: 300 HDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL 359
Query: 293 FNEIPS-RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
+ + + + YN+LI L +++ E A + DEM+EK + TYH F+ ++
Sbjct: 360 MKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA-FMRIL 418
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
R TG E V EL KM + P T +ML++ C+ D L LW+ + EK P
Sbjct: 419 R-TG-EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ ++I GL G++ EA+ K+M ++G
Sbjct: 477 SYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 9/381 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ + ++ L + D A+ LL E + P ++ + ++ + KY+ +D
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY---NTIIDGLCKYKHMDDA 275
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L+ F+ ME G ++ L+ C+ + +A + M+ R +PD + + L
Sbjct: 276 LNLFKEMETK---GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G + E Y EMVKR P VTY+ I+ +C R + ++ E M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TLI G + + ++F E+ R LV +T YN LI L ++ D + A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ EM+ V + +TY+T+ GL ++ +E +++ + + P T ++++ C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
+ +++ L+ L KG P A + +I+G C +G EA K+M E G ++
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Query: 447 SFLMLERFLLQSGDIDKLKEL 467
+ L R L+ GD + EL
Sbjct: 573 CYNTLIRARLRDGDREASAEL 593
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 15/401 (3%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWML---LQETARTHPSLITLKAMSIMLSKIAKYQ 142
S+ PS + F L + +M FD L +Q H SI+++ +
Sbjct: 75 SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY----TYSILINCFCRRS 130
Query: 143 SFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTK 201
L +M + +G E + LL +C +++ EA ++ +M V+ + P+T
Sbjct: 131 QLPLALAVLGKMMK---LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
+ N L+ G + MV +G PD VTY + ++ CK+G LL +M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
E+ K P + T+I G ++ A LF E+ ++ + + Y++LI+ L
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A L+ +MIE+++ D T+ + ++ + +LY +M +R+ P T L
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+ FC + RLD + ++ ++V K P + LI G C +V E E ++M +RG
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 442 HMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLS-VLPPS 481
+ ++ +L + L Q+GD D +E+ K ++S +PP+
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEI---FKEMVSDGVPPN 465
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 168/386 (43%), Gaps = 14/386 (3%)
Query: 83 LHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAK 140
+ + P + + + L + ++ D A L +E T P+++T ++ L +
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 141 YQSFEDTLDGF--RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FS 197
+ L R++ DVF F+ L+ AF + ++ EA ++ +MV R
Sbjct: 307 WSDASRLLSDMIERKINPDVFT--------FSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P + + L+ GF + + + MV + PD VTYN I +CK R +G+ +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
EM +R V T LI G + A+++F E+ S + + YN L+ L +
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ +E A+ + + + ++E TY+ M G+ ++ +E +L+ ++ + P
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
++ FC+ + + +L+ + E G P++ + LI G + E K+M
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 438 ERGRHMSAASFLMLERFLLQSGDIDK 463
G AS + L +L G +DK
Sbjct: 599 SCG-FAGDASTIGLVTNMLHDGRLDK 623
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 184/419 (43%), Gaps = 16/419 (3%)
Query: 79 FNFTLHHSQSPPSHVSFEMT---LHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIML 135
+ F L ++ P S+E+ + IL++MR F W L++E +T+P LI + +++
Sbjct: 115 YRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLM 174
Query: 136 SKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR 195
+ A + ++ M + G E F LL A C +KEA VF M +
Sbjct: 175 RRFASANMVKKAVEVLDEMPK---YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK 231
Query: 196 FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGL 255
F P+ + LL G+ G + + +M + G PD V + + Y G+ D
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 256 RLLEEMERRKFVPTIETITTLIHG-AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
L+ +M +R F P + T LI + +A ++F E+ D Y ALI+
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISG 351
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
+ I+ S++D+M +K V VTY + + + E EL +KM +R P
Sbjct: 352 FCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPD 411
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
++++ C+ + ++ LWN + G P ++I G S+G + EA K
Sbjct: 412 LLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFK 471
Query: 435 QMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGHATGSSNLKV 493
+M+ RG SA + L+ L DKL +M K++ S + + T S L V
Sbjct: 472 EMVSRG-IFSAPQYGTLKSLLNNLVRDDKL----EMAKDVWSCI----SNKTSSCELNV 521
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 178/399 (44%), Gaps = 14/399 (3%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWML---LQETARTHPSLITLKAMSIMLSKIAKYQ 142
S+ PS V F L + +M FD L +Q +H L SI+++ +
Sbjct: 75 SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH----NLYTYSILINCFCRRS 130
Query: 143 SFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
L +M + +G E N LL FC ++ +A S+ G+MV + PD+
Sbjct: 131 QLSLALAVLAKMMK---LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
+ N L+ G + MV +G PD VTY I ++ CK+G L LL++M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
E+ K P + T+I +N A LF E+ ++ + + YN+LI L
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A L+ +MIE+++ + VT+ + ++ + +LY +M +R+ P T L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+ FC + RLD + ++ ++ K P+ + LI G C +V E E ++M +RG
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 442 HMSAASFLMLERFLLQSGDIDKLK-ELDQMIKNLLSVLP 479
+ ++ L Q+ + D + QM+ + VLP
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD--GVLP 464
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 171/381 (44%), Gaps = 9/381 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ + ++ L + D A LL+ E + P ++ + + + Y++ D
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI---IDALCNYKNVNDA 275
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L+ F M+ G +N L++ C+ + +A + M+ R +P+ + + L
Sbjct: 276 LNLFTEMDNK---GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G + E Y EM+KR PD TY+ I+ +C R + + E M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TLI G + + +LF E+ R LV +T Y LI ++++ ++A
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +M+ V D +TY + GL + +E +++ + + P T ++++ C
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
+ +++ L+ L KG P+ +++G C +G EA ++M E G +
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 447 SFLMLERFLLQSGDIDKLKEL 467
++ L R L+ GD EL
Sbjct: 573 TYNTLIRAHLRDGDKAASAEL 593
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A ++FG MV SR P + LL + V +M G S + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ +C++ + L +L +M + + P I T+ +L++G A L ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
D+ +N LI L R A++L+D M+ K + D VTY + GL + I+
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
L +KM Q P ++ C ++ +L+L+ + KG P+ + LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKLKELDQMIK 472
LC+ G+ +A M+ER + + +F +++ F+ + ++ K D+MIK
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 36/175 (20%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+++LL C+ +++ A VF + S+ PD + NI++ G ++G V + +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G P+ VTY + +C+KG L EE
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKG-------LKEE--------------------------- 554
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
A LF E+ + D+G YN LI A LR D ++ L+ EM R D T
Sbjct: 555 -ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 175/389 (44%), Gaps = 15/389 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V++ L ++ + A LL++ L +K SI++ + K S ++ +
Sbjct: 210 PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFN 268
Query: 150 GFRRME-----EDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSM 203
F ME D+ + + L++ FC + + + M+ R +PD +
Sbjct: 269 LFNEMEIKGFKADIII--------YTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
+ L+ F + G + E + EM++RG SPD VTY ID +CK+ + +L+ M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
+ P I T LI+G +LF ++ R +V DT YN LI +E
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A L EM+ +RV D V+Y + GL + E E+++K+ + +++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
C ++D + L+ L KG P +++I GLC +G + EA ++M E G
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 444 SAASFLMLERFLLQSGDIDKLKELDQMIK 472
+ ++ +L R L GD K +L + IK
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIK 589
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 189/437 (43%), Gaps = 25/437 (5%)
Query: 53 ISTSLVENVLGRLFASHSNGL-------------------KALEFFNFTLHHSQSPPSHV 93
+ T+L + GR+F+S S+G A++ F + S+ P +
Sbjct: 15 LRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQ-EMTRSRPRPRLI 73
Query: 94 SFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRR 153
F ++ R + +D L ++ + L +SIM++ + + F
Sbjct: 74 DFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSLA---FSA 129
Query: 154 MEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKE 212
M + + +G E T F+ L+ C + ++ EA + +MV P ++N L+ G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIET 272
+G V+ L MV+ GF P+ VTY + CK G+ + LL +ME RK
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+ +I G + A LFNE+ + D +Y LI + + L+ +MI
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
++++ D V + + ++ + EL+++M QR P T T L+ FC+ +LD
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
+ + + +V KG P+ ++LI G C + + E ++M RG ++ L
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 453 RFLLQSGDIDKLKELDQ 469
+ + G ++ KEL Q
Sbjct: 430 QGFCELGKLEVAKELFQ 446
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 11/251 (4%)
Query: 143 SFEDTLDGFRRMEE--------DVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKM 192
++ +DGF + + D+ V + G + FN+L+ +C + + +F KM
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
R DT + N L+ GF E G + + + EMV R PD V+Y I +D C G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
L + E++E+ K I +IHG A LF +P + + D YN +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I L + + A L +M E +G TY+ + + ++L +++ + F
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 372 VPQTRTVVMLM 382
TV M++
Sbjct: 594 SVDASTVKMVV 604
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 40/262 (15%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P V++ + + DKA +L + + ++ +I+++ K +D L+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHML-DLMVSKGCGPNIRTFNILINGYCKANLIDDGLE 408
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
FR+M G T +N L++ FC +++ A+ +F +MVSR PD S ILL
Sbjct: 409 LFRKMS---LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 209 GFKESG-------------------DVTSVELFYHEMVK----------------RGFSP 233
G ++G D+ + H M +G P
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
D TYNI I CKKG + L +ME P T LI +A K+ +L
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 294 NEIPSRNLVVDTGVYNALITAL 315
EI VD ++ L
Sbjct: 586 EEIKRCGFSVDASTVKMVVDML 607
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 9/374 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ V++ + ++ L + D A+ LL E A+ ++ + + + KY+ +D
Sbjct: 148 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI---IDSLCKYRHVDDA 204
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNIL 206
L+ F+ ME G ++ L+ CS + +A + M+ + +P+ + N L
Sbjct: 205 LNLFKEMETK---GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G E + +M+KR PD TYN I+ +C R ++ E M +
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P ++T TLI G + +LF E+ R LV DT Y LI L D ++A
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +M+ V D +TY + GL + +E E++ M + +++ C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
+ ++D L+ L KG P+ + +I+GLCS+ + EA+ K+M E G +
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501
Query: 447 SFLMLERFLLQSGD 460
++ L R L+ GD
Sbjct: 502 TYNTLIRAHLRDGD 515
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 9/397 (2%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFE 145
S+ PS F L + +M+ FD L ++ R S L +I+++ +
Sbjct: 4 SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQIS 62
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L +M + +G E + LL +C +++ +A ++ +MV + PDT +
Sbjct: 63 LALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G + MV+RG P+ VTY + ++ CK+G LL +ME
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
K + T+I ++ A LF E+ ++ + + Y++LI+ L A
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L+ +MIEK++ + VT++ + ++ +L+ M +R+ P T L+
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
FC + RLD + ++ ++V K P + LI G C +V + E ++M RG
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 445 AASFLMLERFLLQSGDIDKLKEL-DQMIKNLLSVLPP 480
++ L + L GD D +++ QM+ + +PP
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSD---GVPP 393
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 160/374 (42%), Gaps = 10/374 (2%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V F + L + R+ D A L +E T P+++T S ++S + Y + D
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY---SSLISCLCSYGRWSDASQL 242
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
M E + T FN L+ AF + + EA + M+ R PD + N L+ G
Sbjct: 243 LSDMIEKK-INPNLVT--FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
F + + + MV + PD TYN I +CK R DG L EM R V
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
T TTLI G + A+++F ++ S + D Y+ L+ L + +E AL + D
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
M + ++LD Y TM G+ ++ ++ +L+ ++ + P T ++ C
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
L + +L + E G P + + LI G + E ++M R + AS +
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTI 538
Query: 450 MLERFLLQSGDIDK 463
L +L G +DK
Sbjct: 539 GLVANMLHDGRLDK 552
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 157/354 (44%), Gaps = 8/354 (2%)
Query: 122 HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQ 181
PS++TL ++ + Y + D +++ V +G T F L+ +
Sbjct: 77 EPSIVTLSSL------LNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 182 MKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
EA ++ +MV R P+ + +++ G + GD+ ++M D V +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
ID+ CK D L L +EME + P + T ++LI A QL +++ +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS 360
+ + +NALI A ++ A L D+MI++ ++ D TY+++ G ++
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 361 ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGL 420
++++ M ++ P T L+K FC++ R++ L+ + +G LI GL
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 421 CSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQMIKN 473
G A + KQM+ G ++ +L L +G ++K L+ D M K+
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 170/366 (46%), Gaps = 5/366 (1%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A FF + + ++ + IL + R F+ +L+E L+T++ +I
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMETFTIA 235
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
+ A + + + F M++ F + G + N LL + + KEA+ +F K+
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKF---KIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 292
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
RF+P+ + +LL G+ ++ +++M+ G PD V +N+ ++ + + D
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
++L M+ + P + + T +I + A + F+++ L D VY LIT
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
K +++ L+ EM EK DG TY+ + + E + +Y KM Q P
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T M+MK + ++ ++W+ +++KG CP ++ +LI GL S G+ EA +
Sbjct: 473 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 532
Query: 435 QMLERG 440
+ML++G
Sbjct: 533 EMLDKG 538
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 168/366 (45%), Gaps = 5/366 (1%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A FF + ++ + IL + R F+ +L+E L+T++ +I
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMETFTIA 235
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
+ A + + + F M++ F + G + N LL + + KEA+ +F K+
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKF---KIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 292
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
RF+P+ + +LL G+ ++ +++M+ +G PD V +N+ ++ + + D
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
++L M+ + P + + T +I + A + F+++ L D VY LIT
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
K +++ L+ EM EK DG TY+ + + E + +Y KM Q P
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T M+MK + ++ ++W +++KG CP ++ +LI GL G+ EA +
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Query: 435 QMLERG 440
+ML++G
Sbjct: 533 EMLDKG 538
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 169/366 (46%), Gaps = 5/366 (1%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A FF + ++ + IL + R F+ +L+E L+T++ +I
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK--GLLTMETFTIA 234
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
+ A + + + F M++ F + G + N LL + + KEA+ +F K+
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKF---KIGVETINCLLDSLGRAKLGKEAQVLFDKLKE 291
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
RF+P+ + +LL G+ ++ +++M+ G PD V +N+ ++ + + D
Sbjct: 292 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
++L M+ + P + + T +I + A + F+++ L D VY LIT
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
K +++ L+ EM EK DG TY+ + + E + +Y KM Q P
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T M+MK + ++ ++W+ +++KG CP ++ +LI GL S G+ EA +
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 531
Query: 435 QMLERG 440
+ML++G
Sbjct: 532 EMLDKG 537
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 168/374 (44%), Gaps = 9/374 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ V++ + ++ L + D A LL E A+ ++ + + + KY+ +D
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI---IDSLCKYRHVDDA 279
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNIL 206
L+ F+ ME G ++ L+ CS + +A + M+ + +P+ + N L
Sbjct: 280 LNLFKEMETK---GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G E Y +M+KR PD TYN ++ +C R ++ E M +
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TLI G + +LF E+ R LV DT Y LI L D ++A
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +M+ V D +TY + GL + +E E++ M + +++ C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
+ ++D L+ L KG P+ + +I+GLCS+ + EA+ K+M E G ++
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Query: 447 SFLMLERFLLQSGD 460
++ L R L+ GD
Sbjct: 577 TYNTLIRAHLRDGD 590
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 190/434 (43%), Gaps = 24/434 (5%)
Query: 63 GRLFASHS--------NGL------KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYF 108
GR F+S S NGL A+ F + S+ PS V F L + +M+ F
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFG-GMVKSRPLPSIVEFNKLLSAIAKMKKF 101
Query: 109 DKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE 168
D L ++ R + L +I+++ + L +M + +G E
Sbjct: 102 DVVISLGEKMQRLEI-VHGLYTYNILINCFCRRSQISLALALLGKMMK---LGYEPSIVT 157
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ LL +C +++ +A ++ +MV + PDT + L+ G + MV
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 217
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+RG P+ VTY + ++ CK+G L LL +ME K + T+I ++
Sbjct: 218 QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 277
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A LF E+ ++ + + Y++LI+ L A L+ +MIEK++ + VT++ +
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
++ +LY M +R+ P T L+ FC + RLD + ++ ++V K
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P + LI G C +V + E ++M RG ++ L + L GD D +++
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 468 -DQMIKNLLSVLPP 480
QM+ + +PP
Sbjct: 458 FKQMVSD---GVPP 468
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 163/374 (43%), Gaps = 10/374 (2%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V F + L + R+ D A L +E T P+++T S ++S + Y + D
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY---SSLISCLCSYGRWSDASQL 317
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
M E + T FN L+ AF + + EA ++ M+ R PD + N L+ G
Sbjct: 318 LSDMIEKK-INPNLVT--FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 374
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
F + + + MV + PD VTYN I +CK R DG L EM R V
Sbjct: 375 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
T TTLI G + A+++F ++ S + D Y+ L+ L + +E AL + D
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
M + ++LD Y TM G+ ++ ++ +L+ ++ + P T ++ C
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 554
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
L + +L + E G P++ + LI G + E ++M R + AS +
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM-RSCRFVGDASTI 613
Query: 450 MLERFLLQSGDIDK 463
L +L G +DK
Sbjct: 614 GLVANMLHDGRLDK 627
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 176/384 (45%), Gaps = 5/384 (1%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V++ L+++ + A LL++ + L +K SI++ + K+ S ++ +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKHGSLDNAFN 284
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
F ME G +N+L+ FC+ + + + M+ R +P+ + ++L+
Sbjct: 285 LFNEME---MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
F + G + E + EM+ RG +PD +TY ID +CK+ ++++ M + P
Sbjct: 342 SFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDP 401
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
I T LI+G +LF ++ R +V DT YN LI + A L
Sbjct: 402 NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
EM+ ++V + VTY + GL + E E+++K+ + +++ C
Sbjct: 462 QEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 521
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
++D + L+ L KG P +++I GLC +G + EA ++M E G ++
Sbjct: 522 SKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 449 LMLERFLLQSGDIDKLKELDQMIK 472
+L R L GD K +L + +K
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELK 605
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 6/396 (1%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A++ F + HS+ P+ + F + + + +D L ++ + L +SIM
Sbjct: 72 AIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIM 129
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
++ + + F M + + +G E T F+ L+ C + ++ EA + +MV
Sbjct: 130 INCFCRCRKL---CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 195 R-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
PD ++N L+ G SG L +MV+ G P+ VTY ++ CK G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
+ LL +ME R + +I G + A LFNE+ + + + YN LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
+ + L+ +MI++++ + VT+ + ++ + EL+++M R P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
T T L+ FC+ LD + + + +V KG P+ ++LI G C ++ + E
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 434 KQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
++M RG ++ L + + G ++ KEL Q
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 146/327 (44%), Gaps = 9/327 (2%)
Query: 106 RYFDKAWMLLQETAR-THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREF 164
R+ D A +L R +P+++T + K K + E+ +E + G
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL------HKEMIHRGIAP 366
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFY 223
T + L+ FC + + +A + MVS+ P+ ++ NIL+ G+ ++ + +
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+M RG D VTYN I +C+ G+ L +EM RK P I T L+ G
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
+ KA ++F +I + +D G+YN +I + + ++ A L + K V+ TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ M GL + + L++KM + P T +L++ + S+ L L
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAF 430
G+ A + ++I L S G++ ++F
Sbjct: 607 CGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 106/281 (37%), Gaps = 44/281 (15%)
Query: 73 LKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWML--LQETARTHPSLITLKA 130
L+ E + + H P +++ + + + DKA + L + P++ +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI---RT 405
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG 190
+I+++ K +D L+ FR+M G T +N L++ FC ++ A+ +F
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMS---LRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 191 KMVSR-FSPDTKSMNILLLGFKESG-------------------DVTSVELFYHEMVK-- 228
+MVSR P+ + ILL G ++G D+ + H M
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 229 --------------RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT 274
+G P TYNI I CKKG + L +ME P T
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
LI +A K+ +L E+ VD +I L
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%)
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
FS N++Y R+ + + D + L +M + +PT+ + L +
Sbjct: 48 AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
L ++ + + + + +I R + + A S M ++I+ E + +T+ T+ G
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
L + EL +M + P T+ L+ C + + ++ L + +VE G P+
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
A ++ +C GQ A E ++M ER + A + ++ L + G +D
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 182/385 (47%), Gaps = 5/385 (1%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V++ L+++ + A LL++ + L +K SI++ + K S ++ +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKDGSLDNAFN 284
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
F ME G + +N L+ FC+ + + + M+ R SP+ + ++L+
Sbjct: 285 LFNEME---IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
F + G + + EM++RG +P+ +TYN ID +CK+ R + +++++ M + P
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDP 401
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
I T LI+G +LF E+ R ++ +T YN L+ +S +E A L
Sbjct: 402 DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
EM+ +RV D V+Y + GL + +E E++ K+ + ++++ C
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
++D + L+ L KG A A +++I+ LC + + +A ++M E G ++
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 449 LMLERFLLQSGDIDKLKELDQMIKN 473
+L R L D EL + +K+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKS 606
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 11/403 (2%)
Query: 72 GLKALEFFNF--TLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLIT 127
G+KA + + + S+ P+ + F + + + ++ L + E+ S+ T
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 128 LKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARS 187
L SIM++ + + F M + + +G E T FN LL C + ++ EA
Sbjct: 126 L---SIMINCFCRCRKLSY---AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 188 VFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
+ +MV P ++N L+ G +G V+ + MV+ GF P+ VTY ++ C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
K G+ + LL +ME R + +I G + A LFNE+ + D
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
YN LI + + L+ +MI++++ + VT+ + ++ + +L ++M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
QR P T T L+ FC+ RL+ ++ + + ++ KG P ++LI G C ++
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
+ E ++M RG + ++ L + QSG ++ K+L Q
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 112/251 (44%), Gaps = 11/251 (4%)
Query: 143 SFEDTLDGF---RRMEE-----DVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKM 192
++ +DGF R+EE D+ + + D FN+L+ +C ++ + +F +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
R +T + N L+ GF +SG + + + EMV R PD V+Y I +D C G
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
L + ++E+ K I +IHG A LF +P + + +D YN +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I+ L R + A L +M E+ D +TY+ + + +EL ++M F
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Query: 372 VPQTRTVVMLM 382
TV M++
Sbjct: 610 PADVSTVKMVI 620
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 103/242 (42%)
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
LF E FS N++Y ++ + + D + L +M + + +PT+ L
Sbjct: 39 LFCCERGFSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAI 98
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ L ++ S+ + + +I R + + A S M ++++ E D
Sbjct: 99 AKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDT 158
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
V ++T+ GL + EL +M + P T+ L+ C N ++ ++ L +
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+VE G+ P+ ++ +C GQ A E ++M ER + A + ++ L + G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 461 ID 462
+D
Sbjct: 279 LD 280
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 111 AWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE 168
A L QE + R P +++ K I+L + E L+ F ++E+ E
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYK---ILLDGLCDNGELEKALEIFGKIEKSKM---ELDIGI 510
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +++ C+ ++ +A +F + + D ++ NI++ ++ ++ + +M
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMT 570
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ G +PD +TYNI I + L+EEM+ F + T+ +I+
Sbjct: 571 EEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 12/342 (3%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P IT + L KI + + +D +R + ++ + FN L+ F + ++
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLF--YRIPKPEIVI--------FNTLIHGFVTHGRL 369
Query: 183 KEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
+A++V MV+ + PD + N L+ G+ + G V H+M +G P+ +Y I
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
+D +CK G+ + +L EM P LI +A ++F E+P +
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS 360
D +N+LI+ L +I+ AL L+ +MI + V + VTY+T+ +R I+
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 361 ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGL 420
+L +M + T L+K C+ +D + SL+ ++ G+ P + ++LI GL
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGL 609
Query: 421 CSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
C G V EA E K+M+ RG +F L L ++G I+
Sbjct: 610 CRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 168/391 (42%), Gaps = 28/391 (7%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V ++ +H L++ ++A LL+E ++ + ++F D +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEM--------------FLMGCVPDAETFNDVIL 295
Query: 150 G---FRRMEEDV-----FVGREFGTDE--FNVLLKAFCSQRQMKEARSVFGKMVSRFSPD 199
G F R+ E + R F D+ + L+ C ++ A+ +F ++ P+
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---PE 352
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
N L+ GF G + + +MV G PD TYN I Y K+G G L +L
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
+M + P + + T L+ G + +A + NE+ + L +T +N LI+A +
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
I A+ + EM K + D T++++ GL I+ L + M V T T
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
L+ F + + + L N +V +G + LI GLC G+V +A ++ML
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 439 RGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
G S S +L L +SG +++ E +
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQK 623
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGF-KESGDVTSVELFYHEM 226
+ +L+ FC ++ EA +V +M + P+T N L+ F KE +VE+F EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF-REM 485
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
++G PD T+N I C+ L LL +M V T TLI+
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+AR+L NE+ + +D YN+LI L R+ +++ A SL ++M+ ++ + +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
GL RS +E E ++M R P T L+ C+ R++ L+++ L +G
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
P + L++ LC G V++A + +E G
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 149/346 (43%), Gaps = 46/346 (13%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTK-SMNILLLGFKESGDVTSVELFYHEMV 227
+NV+L+ S K A +VF M+SR P T + +++ F ++ S +M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG-------- 279
K G P++V Y I + K R + L+LLEEM VP ET +I G
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 280 --------------------AGIVQNA-------GKARQLFNEIPSRNLVVDTGVYNALI 312
G + N A+ LF IP +V ++N LI
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV----IFNTLI 360
Query: 313 TALLRSKDIESALSLMDEMIEKR-VELDGVTYHTMFLGLMRSTGIEGVS-ELYQKMAQRN 370
+ ++ A +++ +M+ + D TY+++ G + G+ G++ E+ M +
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE-GLVGLALEVLHDMRNKG 419
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
P + +L+ FC+ ++D + ++ N + G P+ + LI+ C ++ EA
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLS 476
E ++M +G +F L L + +D++K ++++++S
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCE---VDEIKHALWLLRDMIS 522
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 140/315 (44%), Gaps = 16/315 (5%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMS 132
ALE + + + P+ S+ + + ++ D+A+ +L E + P+ + +
Sbjct: 408 ALEVLH-DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV---GFN 463
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
++S K + ++ FR M G + FN L+ C ++K A + M
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRK---GCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
+S +T + N L+ F G++ +EMV +G D +TYN I C+ G
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
L E+M R P+ + LI+G +G+V+ A + ++ E+ R D +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQK---EMVLRGSTPDIVTF 637
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N+LI L R+ IE L++ ++ + + D VT++T+ L + + L + +
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Query: 369 RNFVPQTRTVVMLMK 383
FVP RT +L++
Sbjct: 698 DGFVPNHRTWSILLQ 712
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 12/288 (4%)
Query: 178 SQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVEL-FYHEMVKRGFSPDNV 236
+ R M E R+V+ P KS N++L SG+ V +++M+ R P
Sbjct: 165 TTRLMLEMRNVYS-----CEPTFKSYNVVL-EILVSGNCHKVAANVFYDMLSRKIPPTLF 218
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEI 296
T+ + + +C L LL +M + VP TLIH +A QL E+
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 297 PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGI 356
V D +N +I L + I A +++ M+ + D +TY + GL + +
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 357 EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK-GYCPHAHALDL 415
+ +L+ ++ + P+ L+ F + RLD + ++ + +V G P +
Sbjct: 339 DAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 394
Query: 416 LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
LI G G V A E M +G + S+ +L + G ID+
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 171/365 (46%), Gaps = 12/365 (3%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
S ++ + + + + F+ ME G + +N L++ C + + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK---GIKSSVVTYNSLVRGLCKAGKWNDGALLLKD 288
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
MVSR P+ + N+LL F + G + Y EM+ RG SP+ +TYN +D YC + R
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+ +L+ M R K P I T T+LI G +V+ ++F I R LV + Y+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
L+ +S I+ A L EM+ V D +TY + GL + +E E+++ + +
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
+++ C+ +++ + +L+ L KG P+ ++I+GLC +G + EA
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGHATGSSN 490
++M E G + ++ L R L+ GD+ +L + +K S G + +S+
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK--------SCGFSADASS 580
Query: 491 LKVKV 495
+K+ +
Sbjct: 581 IKMVI 585
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 38/321 (11%)
Query: 109 DKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE 168
D A L QE R+ P L +L S S IA+ + F LD +++E + G
Sbjct: 70 DDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN---GIAHNIYT 125
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N+++ FC + A SV GK++ K
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVM----------------------------------K 151
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
G+ PD T+N I +G+ + + L++ M P + T ++++G +
Sbjct: 152 LGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSL 211
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A L ++ RN+ D Y+ +I +L R I++A+SL EM K ++ VTY+++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL ++ + L + M R VP T +L+ F + +L + L+ ++ +G P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 409 HAHALDLLITGLCSRGQVHEA 429
+ + L+ G C + ++ EA
Sbjct: 332 NIITYNTLMDGYCMQNRLSEA 352
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 146/335 (43%), Gaps = 9/335 (2%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDTL 148
S V++ + L + ++ +LL++ P++IT +++L K ++
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF---NVLLDVFVKEGKLQEAN 318
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILL 207
+ ++ M + G +N L+ +C Q ++ EA ++ MV ++ SPD + L+
Sbjct: 319 ELYKEM---ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G+ V + + KRG + VTY+I + +C+ G+ L +EM +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P + T L+ G KA ++F ++ + + +Y +I + + +E A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
+ K V+ + +TY M GL + + + L +KM + P T L++ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCS 422
+ L S L + G+ A ++ ++I L S
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
F ++ G + + T NI I+ +C+ + +L ++ + + P T TLI G
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLF 169
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ +A L + + D YN+++ + RS D AL L+ +M E+ V+ D
Sbjct: 170 LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY T+ L R I+ L+++M + T L++ C+ + + L +
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGD 460
V + P+ ++L+ G++ EA E K+M+ RG + ++ +++ + +Q+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 461 IDKLKELDQMIKNLLS 476
+ LD M++N S
Sbjct: 350 SEANNMLDLMVRNKCS 365
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 201/445 (45%), Gaps = 35/445 (7%)
Query: 58 VENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHV--SFEMTLHILTRMRYFDKAWMLL 115
V+NVL ++ + L +LEFFN+ +++P SH + + LH LT+ R F A +L
Sbjct: 84 VKNVLLKI---QKDYLLSLEFFNWA--KTRNPGSHSLETHAIVLHTLTKNRKFKSAESIL 138
Query: 116 QET---------ARTHPSLI--------TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDV 158
++ A+ +L+ T + + A + F + D F +M++
Sbjct: 139 RDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYG 198
Query: 159 FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVT 217
F+ + N + + Q ++ A + +M + SP+ ++N+++ G+ SG +
Sbjct: 199 FLPT---VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
+M + GF +V+YN I +C+KG L+L M + P + T TLI
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
HG +A ++F E+ + N+ +T YN LI + D E A ++M+ ++
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D +TY+ + GL + ++ +++ + N VP + T L+ C D L
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQ 457
+ ++ G P+ ++L++ C +E F+ + Q+L R M S + R + Q
Sbjct: 436 YKSMIRSGCHPNEQTFNMLVSAFCR----NEDFDGASQVL---REMVRRSIPLDSRTVHQ 488
Query: 458 SGDIDKLKELDQMIKNLLSVLPPSK 482
+ K + DQ++K LL + K
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 22/310 (7%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--------THPSLI 126
AL F+ + + P+ + M + R DK LLQ+ R ++ +LI
Sbjct: 222 ALRFYR-EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
+LS K ++ + G ++ +V FN L+ FC +++EA
Sbjct: 281 AGHCEKGLLSSALKLKN----MMGKSGLQPNVVT--------FNTLIHGFCRAMKLQEAS 328
Query: 187 SVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
VFG+M + +P+T + N L+ G+ + GD FY +MV G D +TYN I
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
CK+ + + ++E+++ VP T + LI G + +NA + +L+ + +
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+N L++A R++D + A ++ EM+ + + LD T H + GL + V +L Q+
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
Query: 366 MAQRNFVPQT 375
M + F+ ++
Sbjct: 509 MEGKKFLQES 518
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 201/445 (45%), Gaps = 35/445 (7%)
Query: 58 VENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHV--SFEMTLHILTRMRYFDKAWMLL 115
V+NVL ++ + L +LEFFN+ +++P SH + + LH LT+ R F A +L
Sbjct: 84 VKNVLLKI---QKDYLLSLEFFNWA--KTRNPGSHSLETHAIVLHTLTKNRKFKSAESIL 138
Query: 116 QET---------ARTHPSLI--------TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDV 158
++ A+ +L+ T + + A + F + D F +M++
Sbjct: 139 RDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYG 198
Query: 159 FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVT 217
F+ + N + + Q ++ A + +M + SP+ ++N+++ G+ SG +
Sbjct: 199 FLPT---VESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
+M + GF +V+YN I +C+KG L+L M + P + T TLI
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLI 315
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
HG +A ++F E+ + N+ +T YN LI + D E A ++M+ ++
Sbjct: 316 HGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQ 375
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D +TY+ + GL + ++ +++ + N VP + T L+ C D L
Sbjct: 376 RDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL 435
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQ 457
+ ++ G P+ ++L++ C +E F+ + Q+L R M S + R + Q
Sbjct: 436 YKSMIRSGCHPNEQTFNMLVSAFCR----NEDFDGASQVL---REMVRRSIPLDSRTVHQ 488
Query: 458 SGDIDKLKELDQMIKNLLSVLPPSK 482
+ K + DQ++K LL + K
Sbjct: 489 VCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 144/310 (46%), Gaps = 22/310 (7%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--------THPSLI 126
AL F+ + + P+ + M + R DK LLQ+ R ++ +LI
Sbjct: 222 ALRFYR-EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLI 280
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
+LS K ++ + G ++ +V FN L+ FC +++EA
Sbjct: 281 AGHCEKGLLSSALKLKN----MMGKSGLQPNVVT--------FNTLIHGFCRAMKLQEAS 328
Query: 187 SVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
VFG+M + +P+T + N L+ G+ + GD FY +MV G D +TYN I
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
CK+ + + ++E+++ VP T + LI G + +NA + +L+ + +
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+N L++A R++D + A ++ EM+ + + LD T H + GL + V +L Q+
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQE 508
Query: 366 MAQRNFVPQT 375
M + F+ ++
Sbjct: 509 MEGKKFLQES 518
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 173/384 (45%), Gaps = 5/384 (1%)
Query: 85 HSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSF 144
S+ PS V F L + +M FD L + S L + +I+++ +
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQL 131
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSM 203
L +M + +G E + LL +C +++ EA ++ +M V + P+T +
Sbjct: 132 PLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
N L+ G + MV RG PD TY ++ CK+G L LL++ME+
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
K + TT+I +N A LF E+ ++ + + YN+LI L
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A L+ +MIE+++ + VT+ + ++ + +LY +M +R+ P T L+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
FC + RLD + ++ ++ K P+ + LI G C +V E E ++M +RG
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 444 SAASFLMLERFLLQSGDIDKLKEL 467
+ ++ L + L Q+GD D +++
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKI 452
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 4/330 (1%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+ ++ + Y++ D L+ F M+ G +N L++ C+ + +A +
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNK---GIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M+ R +P+ + + L+ F + G + E Y EM+KR PD TY+ I+ +C R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+ + E M + P + T TLI G + + +LF E+ R LV +T YN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
LI L ++ D + A + +M+ V D +TY + GL + +E +++ + +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
P T ++++ C+ +++ L+ L KG P+ +I+G C +G EA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGD 460
++M E G ++ ++ L R L+ GD
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 141/332 (42%), Gaps = 38/332 (11%)
Query: 108 FDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD 167
D A L E ++ P L ++ + +LS IAK F+ + RM+ + +
Sbjct: 61 LDDAVDLFGEMVQSRP-LPSIVEFNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLY 116
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N+L+ FC + Q+ A +V GKM+
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMM---------------------------------- 142
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K G+ PD VT + ++ YC R + + L+++M ++ P T TLIHG + A
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A L + + +R D Y ++ L + DI+ ALSL+ +M + ++E D V Y T+
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
L + L+ +M + P T L++ C R + L + ++E+
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 322
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
P+ LI G++ EA + +M++R
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+++LL C ++++A VF + S+ PD + NI++ G ++G V + +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G P+ + Y I +C+KG + L EM+ +P T TLI +
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITAL 315
+ +L E+ S V D + +I L
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVINML 615
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 1/192 (0%)
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ D + L EM + + +P+I L+ + L + + + D YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
LI R + AL+++ +M++ E D VT ++ G I L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ P T T L+ + + +++L + +V +G P ++ GLC RG + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 430 FECSKQMLERGR 441
K+M E+G+
Sbjct: 240 LSLLKKM-EKGK 250
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%)
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A LF E+ + +N L++A+ + + +SL + M R+ D +Y+ +
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
R + + + KM + + P T+ L+ +C R+ +++L + + Y P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
+ + LI GL + EA +M+ RG ++ + L + GDID
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 6/390 (1%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFE 145
S+ PS V F L + +M F+ + L E +T L SI ++ +
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L +M + +G E + LL +C +++ +A ++ +MV + PDT +
Sbjct: 136 LALAVLAKMMK---LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G + +MV+RG PD VTY ++ CK+G L LL +ME
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA 252
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
+ + T+I ++ A LF E+ ++ + + YN+LI L A
Sbjct: 253 RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDA 312
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L+ M+EK++ + VT++ + + + +L+++M QR+ P T T +L+
Sbjct: 313 SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLING 372
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
FC + RLD + ++ ++V K P+ + LI G C +V + E ++M +RG +
Sbjct: 373 FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGN 432
Query: 445 AASFLMLERFLLQSGDIDKLKEL-DQMIKN 473
++ + + Q+GD D + + QM+ N
Sbjct: 433 TVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 174/392 (44%), Gaps = 48/392 (12%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ ++ L + D A LL E AR +++ + + + KY+ E
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI---IDSLCKYRHVEVA 277
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
+D F ME G +N L+ C+ + +A + M+ + +P+ + N L
Sbjct: 278 VDLFTEMETK---GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G + E + EM++R PD +TYN+ I+ +C R + ++ + M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
+P I+T TLI+G + +LF E+ R LV +T Y +I ++ D +SA
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +M+ RV D +TY + GL Y K+ T +++ KY
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCS----------YGKL---------DTALVIFKYL- 494
Query: 387 QNFRLDLSLSLWNYLVEKGYC------------------PHAHALDLLITGLCSRGQVHE 428
Q ++L++ ++N ++E G C P + +I+GLCS+ + E
Sbjct: 495 QKSEMELNIFIYNTMIE-GMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 429 AFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
A + ++M E G ++ ++ L R L+ D
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 156/375 (41%), Gaps = 46/375 (12%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLL--QETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V F + L + R+ + A L ET P+++T ++ L ++ L
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 151 F--RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILL 207
+++ +V FN L+ AF + ++ EA + +M+ R PDT + N+L+
Sbjct: 319 MLEKKINPNVVT--------FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
GF + + + MV + P+ TYN I+ +CK R DG+ L EM +R V
Sbjct: 371 NGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
T TT+I G + A+ +F ++ S + D Y+ L+ L +++AL +
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVI 490
Query: 328 MDEMIEKRVEL--------------------------------DGVTYHTMFLGLMRSTG 355
+ + +EL D VTY+TM GL
Sbjct: 491 FKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRL 550
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
++ +L++KM + +P + T L++ ++ S L + G+ A +
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS- 609
Query: 416 LITGLCSRGQVHEAF 430
L+T + G++ ++F
Sbjct: 610 LVTNMLHDGRLDKSF 624
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 135/294 (45%), Gaps = 2/294 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A +FG MV SR P N LL + V +M G S D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ +C++ + L +L +M + + P I T+++L++G + A L +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
DT + LI L A++L+D+M+++ + D VTY T+ GL + I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
L KM ++ C+ +++++ L+ + KG P+ + LI
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMIK 472
LC+ G+ +A MLE+ + + +F L + G + + ++L ++MI+
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 176/383 (45%), Gaps = 21/383 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ ++ L + D A LL E + ++ + ++ + KY+ +D
Sbjct: 213 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY---NTIIDGLCKYKHMDDA 269
Query: 148 LDGFRRMEE-----DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
D F +ME DVF +N L+ C+ + +A + M+ + +PD
Sbjct: 270 FDLFNKMETKGIKPDVFT--------YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFS-PDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
N L+ F + G + E Y EMVK PD V YN I +CK R +G+ + E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M +R V T TTLIHG ++ A+ +F ++ S + D YN L+ L + +
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
+E+AL + + M ++ ++LD VTY TM L ++ +E +L+ ++ + P T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+M FC+ + + +L+ + E G P++ + LI G + E K+M G
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 441 RHMSAASFLMLERFLLQSGDIDK 463
A++F ++ +L G +DK
Sbjct: 562 FAGDASTFGLVTN-MLHDGRLDK 583
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 8/346 (2%)
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+R PS++ S +LS IAK F+ + +M+ +G +++ + FC
Sbjct: 69 SRPFPSIVEF---SKLLSAIAKMNKFDLVISLGEQMQN---LGISHNLYTYSIFINYFCR 122
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ Q+ A ++ GKM+ + P ++N LL GF ++ +MV+ G+ PD VT
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
+ + + + + + L+E M + P + T +I+G A L N++
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
+ D +YN +I L + K ++ A L ++M K ++ D TY+ + L
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC-PHAHALDLL 416
S L M ++N P L+ F + +L + L++ +V+ +C P A + L
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 417 ITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
I G C +V E E ++M +RG + ++ L Q+ D D
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 132/295 (44%), Gaps = 2/295 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A +FG MV SR P + LL + V +M G S + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ +C++ + L +L +M + + P+I T+ +L++G +A L +++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
DT + L+ L + A++L++ M+ K + D VTY + GL + +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
L KM + ++ C+ +D + L+N + KG P + LI+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKLKELDQMIKN 473
LC+ G+ +A MLE+ + F +++ F+ + ++ K D+M+K+
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%)
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
+L+ ++ A+ L +M++ R V + + + + + V L ++M
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHN 109
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T + + YFC+ +L L+L++ +++ GY P L+ L+ G C ++ EA
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 435 QMLERGRHMSAASFLMLERFLLQ 457
QM+E G +F L L Q
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQ 192
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 173/382 (45%), Gaps = 11/382 (2%)
Query: 53 ISTSLVENVLGRLFASHSNGL-KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA 111
++ SLV VL R SNG +A FF + + S ++ + +L + R FD
Sbjct: 130 VTESLVLQVLRRF----SNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLM 185
Query: 112 WMLLQETARTHPS-LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN 170
W L+ E + S L+TL MS ++ ++AK + +D F ME+ G + T N
Sbjct: 186 WELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSY--GVKTDTIAMN 243
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L+ A + ++ A VF K+ PD ++ NIL+ GF ++ M
Sbjct: 244 SLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTE 303
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
F+PD VTY ++ YCK+G F +LEEM P + T T ++H G + +A
Sbjct: 304 FTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEAL 363
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
++ ++ V D Y++LI L ++ + A + ++M + V D + Y+TM
Sbjct: 364 GVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAA 423
Query: 351 MRSTGIEGVSELYQKMAQ---RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ + E L ++M + P T L+K C ++ L L +++V+
Sbjct: 424 LHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVS 483
Query: 408 PHAHALDLLITGLCSRGQVHEA 429
LLI GLC G+V EA
Sbjct: 484 IDVSTYILLIRGLCMSGKVEEA 505
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 177/386 (45%), Gaps = 19/386 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ ++ L + D A LL+ E + ++ + + + KY+ +D
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI---IDGLCKYKHMDDA 277
Query: 148 LDGFRRMEE-----DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
L+ F M+ DVF ++ L+ C+ + +A + M+ R +P+
Sbjct: 278 LNLFTEMDNKGIRPDVFT--------YSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
+ + L+ F + G + E Y EM+KR PD TY+ I+ +C R + + E M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
+ P + T +TLI G + + +LF E+ R LV +T Y LI +++D
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
++A + +M+ V + +TY+ + GL ++ + +++ + + P T ++
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
++ C+ +++ L+ L KG P+ A + +I+G C +G EA K+M E G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 442 HMSAASFLMLERFLLQSGDIDKLKEL 467
++ ++ L R L+ GD + EL
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAEL 595
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 177/394 (44%), Gaps = 10/394 (2%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFE 145
S+ PS V F L + +M F+ + L E +T L SI ++ +
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNKFELV-ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L +M + +G E + LL +C +++ +A ++ +MV + PDT +
Sbjct: 136 LALAVLAKMMK---LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G + +MV+RG PD VTY ++ CK+G L LL++ME+
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG 252
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
K + T+I G ++ A LF E+ ++ + D Y++LI+ L A
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 312
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L+ +MIE+++ + VT+ + ++ + +LY +M +R+ P T L+
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
FC + RLD + ++ ++ K P+ LI G C +V E E ++M +RG +
Sbjct: 373 FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGN 432
Query: 445 AASFLMLERFLLQSGDIDKLKELDQMI-KNLLSV 477
++ L Q+ D D QM+ K ++SV
Sbjct: 433 TVTYTTLIHGFFQARDCDNA----QMVFKQMVSV 462
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 2/294 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A +FG MV SR P N LL + V +M G S D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ +C++ + L +L +M + + P I T+++L++G + A L +++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
DT + LI L A++L+D+M+++ + D VTY T+ GL + I+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
L +KM + ++ C+ +D +L+L+ + KG P LI+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKLKELDQMIK 472
LC+ G+ +A M+ER + + +F +++ F+ + ++ K D+MIK
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 177/391 (45%), Gaps = 12/391 (3%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA---WMLLQETARTHPSLITLKAM 131
+L+ F F + + PS F L +++M+ +D W +Q H L
Sbjct: 65 SLDLF-FHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH----NLCTC 119
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+I+L+ + L +M + +G E F LL FC ++ +A +F +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKM---IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
MV + P+ N ++ G +S V + + M K G PD VTYN I C GR
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+ D R++ M +R+ P + T LI +A + + E+ R+L D Y+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
LI L ++ A + M+ K D VTY + G +S +E +L+ +M+QR
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
V T T +L++ +C+ +L+++ ++ +V G P+ ++L+ GLC G++ +A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
M + G ++ ++ R + ++G++
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
L ++ S +LS I+K + ++ + + +M+ +G N+LL FC Q+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQ---MLGIPHNLCTCNILLNCFCRCSQLSL 134
Query: 185 ARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A S GKM+ P + LL GF V + +MV G+ P+ V YN ID
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
CK + + L LL ME+ P + T +LI G A ++ + + R +
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
D +NALI A ++ + A +EMI + ++ D VTY + GL + ++ E++
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
M + P T +L+ +C++ +++ + L+ + ++G + +LI G C
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 424 GQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQMIKN 473
G+++ A E ++M+ G H + ++ +L L +G I+K L L M KN
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 163/386 (42%), Gaps = 14/386 (3%)
Query: 60 NVLGRLFASHSNGLKALEFFN--FTLHHSQSPPSHVSFEMTLHILTRM-RYFDKAWMLLQ 116
N+L F S AL F L H PS V+F L+ R R +D +M Q
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHE---PSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 117 ETARTH-PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKA 175
+ P+++ + + + K + ++ LD RME+D +G + T +N L+
Sbjct: 177 MVGMGYKPNVVIYNTI---IDGLCKSKQVDNALDLLNRMEKD-GIGPDVVT--YNSLISG 230
Query: 176 FCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
CS + +A + M R PD + N L+ + G V+ E FY EM++R PD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
VTY++ I C R + + M + P + T + LI+G + +LF
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
E+ R +V +T Y LI R+ + A + M+ V + +TY+ + GL +
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 355 GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
IE + M + T ++++ C+ + + ++ L +G P
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470
Query: 415 LLITGLCSRGQVHEAFECSKQMLERG 440
++ GL +G EA ++M E G
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKEDG 496
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 20/277 (7%)
Query: 106 RYFDKAWMLLQETAR-THPSLITLKAMSIMLSKIAKYQSFEDTLDGF--RRMEEDVFVGR 162
R+ D M+ T R +P + T A+ K + E+ + R ++ D+
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT-- 293
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVEL 221
+++L+ C ++ EA +FG MVS+ PD + +IL+ G+ +S V
Sbjct: 294 ------YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV----PTIETITTLI 277
+ EM +RG + VTY I I YC+ G+ L + EE+ RR P I T L+
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGK----LNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
HG KA + ++ + D YN +I + ++ ++ A + + + +
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLM 463
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
D TY TM LGL + L++KM + +P
Sbjct: 464 PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 189/445 (42%), Gaps = 10/445 (2%)
Query: 20 PPDTNTITRIINDPPFPDQXXXXXXXXXXXXXXISTSLVENVLGRLFASHSNGLKALEFF 79
P N I+R+++D P +S++LVE VL R + G A FF
Sbjct: 35 PDLVNEISRVLSDHRNPKDDLEHTLVAYSPR--VSSNLVEQVLKR---CKNLGFPAHRFF 89
Query: 80 NFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIA 139
+ S S+ + + IL + F W L E + I+ K I+ +
Sbjct: 90 LWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYS 149
Query: 140 KYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSP 198
+ + F RM E G + D+ + LL + C ++ + A+ FGK P
Sbjct: 150 RANLPSEACRAFNRMVE---FGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
K+ +IL+ G+ D + + EM++R D + YN +D CK G G ++
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
+EM P + IH + A ++ + + +LV + +N +I L ++
Sbjct: 267 QEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKN 326
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
+ ++ A L+DEMI+K D TY+++ + ++L +M + +P T
Sbjct: 327 EKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY 386
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC-SRGQVHEAFECSKQML 437
M++K + R D + +W + E+ + P ++I GL +G++ EA + M+
Sbjct: 387 NMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMI 446
Query: 438 ERGRHMSAASFLMLERFLLQSGDID 462
+ G + + ML L+ G +D
Sbjct: 447 DEGIPPYSTTVEMLRNRLVGWGQMD 471
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FNVL+KA C Q++ A + M S PD K+ ++ G+ E GD+ +MV
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK-FVPTIETITTLIHGAGIVQNA 286
+ G S NV+ N+ + +CK+GR D L ++EM + F P T TL++G +
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHV 311
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
A ++ + + D YN++I+ L + +++ A+ ++D+MI + + VTY+T+
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
L + +E +EL + + + +P T L++ C +++ L+ + KG
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
P ++LI LCS+G++ EA KQM G S ++
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITY 473
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 180/408 (44%), Gaps = 18/408 (4%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW----MLL 115
NV+ F AL F + P +F ++ L + + A ++L
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 116 QETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFG--TDEFNVLL 173
QE P + T ++ L K+ + + + LD + R+ T +N L+
Sbjct: 323 QEGY--DPDVYTYNSVISGLCKLGEVKEAVEVLDQM--------ITRDCSPNTVTYNTLI 372
Query: 174 KAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
C + Q++EA + + S+ PD + N L+ G + + + EM +G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD TYN+ ID+ C KG+ + L +L++ME ++ T TLI G +A ++
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
F+E+ + ++ YN LI L +S+ +E A LMD+MI + + D TY+++ R
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
I+ +++ Q M P T L+ C+ R++++ L + KG HA
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLERGRH-MSAASFLMLERFLLQSG 459
+ +I GL + + EA ++MLE+ A S+ ++ R L G
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 157/345 (45%), Gaps = 5/345 (1%)
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRME-EDVFVGREFGTDEFNVLLKAFCSQRQMKEARSV 188
++++++ K ED L+ + M +D F ++ FN L+ C +K A +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQY---TFNTLVNGLCKAGHVKHAIEI 317
Query: 189 FGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
M+ + PD + N ++ G + G+V +M+ R SP+ VTYN I T CK
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
+ + + L + + +P + T +LI G + +N A +LF E+ S+ D
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
YN LI +L ++ AL+++ +M +TY+T+ G ++ E++ +M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
+ T L+ C++ R++ + L + ++ +G P + + L+T C G +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+A + + M G ++ L L ++G ++ +L + I+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 193/460 (41%), Gaps = 68/460 (14%)
Query: 75 ALEFFNFTL-------HHSQS-----PPSHVSF-----------EMTLHILTRMRYFDKA 111
L+F+ F++ HHS S P S +SF ++ L R + D A
Sbjct: 6 CLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSA 65
Query: 112 WMLLQETARTHPSLITLKAM-SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGR-EFGTDEF 169
+ L A P+ A+ +L ++ + SF+D +++ ED+ R E GT F
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDD----MKKILEDMKSSRCEMGTSTF 121
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+L++++ E SV M+ F PDT N +L + + VE+ + +M
Sbjct: 122 LILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMS 181
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQ 284
G PD T+N+ I C+ + + +LE+M VP +T TT++ G G +
Sbjct: 182 VWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLD 241
Query: 285 NAGKARQLFNEIP------SRNLVV---------------------------DTGVYNAL 311
A + R+ E S N++V D +N L
Sbjct: 242 GALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTL 301
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
+ L ++ ++ A+ +MD M+++ + D TY+++ GL + ++ E+ +M R+
Sbjct: 302 VNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P T T L+ C+ +++ + L L KG P + LI GLC A E
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 432 CSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQM 470
++M +G ++ ML L G +D+ L L QM
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 167/354 (47%), Gaps = 9/354 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ V++ + ++ L + D A+ LL E A+ +++ S ++ + KY+ +D
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY---STVIDSLCKYRHEDDA 279
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L+ F ME G ++ L+ C+ + +A + M+ R +P+ + N L
Sbjct: 280 LNLFTEMENK---GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ F + G + E Y EM+KR PD TY+ I+ +C R + + E M +
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P + T TLI+G + + +LF E+ R LV +T Y LI +++D ++A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +M+ V + +TY+T+ GL ++ +E +++ + + P T ++++ C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ +++ L+ L KG P + +I+G C +G EA ++M E G
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 184/414 (44%), Gaps = 18/414 (4%)
Query: 63 GRLFASHS--------NGLKALEFFNFT-----LHHSQSPPSHVSFEMTLHILTRMRYFD 109
GR F+S S NGL +++ + + S+ PS F L + +M+ FD
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 110 KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEF 169
L ++ R S L +I+++ + L +M + +G E
Sbjct: 103 LVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALALLGKMMK---LGYEPSIVTL 158
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+ LL +C +++ +A ++ +MV + PDT + L+ G + MV+
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
RG P+ VTY + ++ CK+G LL +ME K + +T+I ++
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A LF E+ ++ + + Y++LI+ L + A L+ +MIE+++ + VT++ +
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
++ + +LY +M +R+ P T L+ FC + RLD + ++ ++ K P
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
+ + LI G C ++ E E ++M +RG + ++ L Q+ D D
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 145/319 (45%), Gaps = 4/319 (1%)
Query: 158 VFVGREF--GTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESG 214
+ GR F G+ ++ +L+ ++ +A +FG MV SR P N LL +
Sbjct: 40 CYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMK 99
Query: 215 DVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT 274
V +M + G S + TYNI I+ +C++ + L LL +M + + P+I T++
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK 334
+L++G + A L +++ DT + LI L A++L+D M+++
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 335 RVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLS 394
+ + VTY + GL + I+ L KM ++ C+ D +
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 395 LSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-LMLER 453
L+L+ + KG P+ LI+ LC+ + +A M+ER + + +F +++
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 454 FLLQSGDIDKLKELDQMIK 472
F+ + ++ K D+MIK
Sbjct: 340 FVKEGKLVEAEKLYDEMIK 358
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 4/310 (1%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
SI++ + K SF+D L F ME G + ++ L+ C+ + + + +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEME---MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLRE 305
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M+ R PD + + L+ F + G + + Y+EM+ RG +PD +TYN ID +CK+
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+ ++ + M + P I T + LI+ + +LF EI S+ L+ +T YN
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
L+ +S + +A L EM+ + V VTY + GL + + E+++KM +
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
+++ C ++D + SL+ L +KG P +++I GLC +G + EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 431 ECSKQMLERG 440
++M E G
Sbjct: 546 MLFRKMKEDG 555
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 5/383 (1%)
Query: 70 SNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLK 129
SN + LE LH+S + +S++ L + A L + ++ P L T
Sbjct: 13 SNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRP-LPTPI 71
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+ + S +A+ + ++ L + ME + G E +++ +C ++++ A SV
Sbjct: 72 DFNRLCSAVARTKQYDLVLGFCKGMELN---GIEHDMYTMTIMINCYCRKKKLLFAFSVL 128
Query: 190 GKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
G+ + PDT + + L+ GF G V+ MV+ PD VT + I+ C K
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
GR + L L++ M F P T +++ N+ A LF ++ RN+ Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
+ +I +L + + ALSL +EM K ++ D VTY ++ GL + +++ ++M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
RN +P T L+ F + +L + L+N ++ +G P + LI G C +HE
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 429 AFECSKQMLERGRHMSAASFLML 451
A + M+ +G ++ +L
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSIL 391
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 157/342 (45%), Gaps = 7/342 (2%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM- 192
+L+++ K + LD FR+MEE + ++++++ + C +A S+F +M
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNI---KASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 193 VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
+ D + + L+ G G EM+ R PD VT++ ID + K+G+
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ L EM R P T +LI G +A Q+F+ + S+ D Y+ LI
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
+ ++K ++ + L E+ K + + +TY+T+ LG +S + EL+Q+M R
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P T +L+ C N L+ +L ++ + + +++I G+C+ +V +A+
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 433 SKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNL 474
+ ++G ++ ++ L + G L E D + + +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKG---SLSEADMLFRKM 551
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 142/320 (44%), Gaps = 8/320 (2%)
Query: 106 RYFDKAWMLLQETARTH-PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREF 164
++ D A ML + R P ++T A+ + K K L+ E + G
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL------LEAKELYNEMITRGIAP 348
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFY 223
T +N L+ FC + + EA +F MVS+ PD + +IL+ + ++ V +
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
E+ +G P+ +TYN + +C+ G+ L +EM R P++ T L+ G
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
KA ++F ++ + + G+YN +I + + ++ A SL + +K V+ D VTY
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTY 528
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ M GL + + L++KM + P T +L++ L S+ L +
Sbjct: 529 NVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKV 588
Query: 404 KGYCPHAHALDLLITGLCSR 423
G+ + + ++I L R
Sbjct: 589 CGFSADSSTIKMVIDMLSDR 608
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 2/227 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+++L+ ++C +++ + +F ++ S+ P+T + N L+LGF +SG + + + + EMV
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
RG P VTY I +D C G L + E+M++ + I +IHG
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A LF + + + D YN +I L + + A L +M E D TY+ +
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLS 394
+ +G+ EL ++M F + T+ M++ + RLD S
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML-SDRRLDKS 613
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 124/293 (42%), Gaps = 2/293 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A +F M+ SR P N L + V F M G D T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ YC+K + +L + + P T +TL++G + +A L + +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
D + LI L + AL L+D M+E + D VTY + L +S
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+L++KM +RN +++ C++ D +LSL+N + KG LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMI 471
LC+ G+ + + ++M+ R +F L ++ G + + KEL ++MI
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 166/345 (48%), Gaps = 9/345 (2%)
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
++++++ +L+ + + Q F+ F+ +E + T N+L+KA C + ++ A
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT--CNLLVKALCKKNDIESAY 211
Query: 187 SVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
V ++ S P+ + +L G+ GD+ S + EM+ RG+ PD TY + +D Y
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
CK GRF + ++++ME+ + P T +I + +G+AR +F+E+ R+ + D+
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+ +I AL ++ A L +M++ D T+ L + + +L+ +
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 366 MAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
++ +P T L+ C+ L + LW+ + E+ P+A ++LI GL G
Sbjct: 392 F-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450
Query: 426 VHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQM 470
V E ++MLE G + +FL+L L + G KE D M
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG-----KEEDAM 490
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 143/342 (41%), Gaps = 20/342 (5%)
Query: 99 LHILTRMRYFDKAWMLLQETARTHPSLI----TLKAMSIMLSKIAKYQSFEDTLDGFRRM 154
+ ++T+ + D A + ++HP T ++ LS+ + E + R
Sbjct: 53 VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 112
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPD------TKSMNILLL 208
+ G D LL+ + + + + +F ++ PD +S+N LL
Sbjct: 113 YPPIKCGENLFID----LLRNYGLAGRYESSMRIFLRI-----PDFGVKRSVRSLNTLLN 163
Query: 209 GFKESGDVTSVE-LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
++ V +F + G +P+ T N+ + CKK ++L+E+ V
Sbjct: 164 VLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLV 223
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P + T TT++ G + A+++ E+ R D Y L+ + A ++
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
MD+M + +E + VTY M L + ++ +M +R+F+P + ++ C+
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ ++D + LW +++ P L LI LC G+V EA
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 166/375 (44%), Gaps = 14/375 (3%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETA 119
N+L R F N AL F+ + P+ V++ + ++R D + LL+ A
Sbjct: 209 NILIRGFCFAGNIDVALTLFD-KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 120 RT--HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE--FNVLLKA 175
P+LI+ + L + + + L R R + DE +N L+K
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR--------RGYSLDEVTYNTLIKG 319
Query: 176 FCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
+C + +A + +M+ +P + L+ ++G++ F +M RG P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
TY +D + +KG + R+L EM F P++ T LI+G + A +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
++ + L D Y+ +++ RS D++ AL + EM+EK ++ D +TY ++ G
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 355 GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
+ +LY++M + P T L+ +C L+ +L L N +VEKG P
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 415 LLITGLCSRGQVHEA 429
+LI GL + + EA
Sbjct: 560 VLINGLNKQSRTREA 574
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 144/313 (46%), Gaps = 4/313 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ +C R++ + + M + P+ S N+++ G G + V EM
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+RG+S D VTYN I YCK+G F L + EM R P++ T T+LIH N
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A + +++ R L + Y L+ + + A ++ EM + VTY+ +
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G + +E + + M ++ P + ++ FC+++ +D +L + +VEKG
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P LI G C + + EA + ++ML G ++ L GD++K +L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 468 -DQMIKNLLSVLP 479
++M++ VLP
Sbjct: 543 HNEMVEK--GVLP 553
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 31/388 (7%)
Query: 108 FDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFG 165
F +A ++ E R PS+IT ++ + K + LD R R
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV--------RGLC 377
Query: 166 TDE--FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELF 222
+E + L+ F + M EA V +M FSP + N L+ G +G +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
+M ++G SPD V+Y+ + +C+ + LR+ EM + P T ++LI G
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+ +A L+ E+ L D Y ALI A D+E AL L +EM+EK V D VT
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVP---------------QTRTVVMLMKYFCQ 387
Y + GL + + L K+ VP + ++VV L+K FC
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
+ + ++ ++ K + P A +++I G C G + +A+ K+M++ G + +
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 448 FLMLERFLLQSGDIDKLKELDQMIKNLL 475
+ L + L + G K+ EL+ +I ++L
Sbjct: 678 VIALVKALHKEG---KVNELNSVIVHVL 702
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 154/359 (42%), Gaps = 32/359 (8%)
Query: 97 MTLHILTRMRYFDKAWMLLQETART-----HPSLITLKAMSIMLSKIAKYQSFEDTLDGF 151
+TLHILT+ + + A +L ++ A + SL+ ++S ++T D
Sbjct: 85 ITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLV--------------FKSLQETYDLC 130
Query: 152 RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG-KMVSRFSPDTKSMNILL-LG 209
+ F++++K++ + +A S+ F P S N +L
Sbjct: 131 YST-----------SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDAT 179
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
+ +++ E + EM++ SP+ TYNI I +C G L L ++ME + +P
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
+ T TLI G ++ +L + + L + YN +I L R ++ ++
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
EM + LD VTY+T+ G + ++ +M + P T L+ C+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
++ ++ + + +G CP+ L+ G +G ++EA+ ++M + G S ++
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 26/294 (8%)
Query: 143 SFEDTLDGFRR---MEEDVFVGREF-------GTDEFNVLLKAFCSQRQMKEARSVFGKM 192
S+ L GF R ++E + V RE T ++ L++ FC QR+ KEA ++ +M
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 193 VS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
+ PD + L+ + GD+ ++EMV++G PD VTY++ I+ K+ R
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 252 GDGLRLLEEMERRKFVPT---------------IETITTLIHGAGIVQNAGKARQLFNEI 296
+ RLL ++ + VP+ +++ +LI G + +A Q+F +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 297 PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGI 356
+N D YN +I R+ DI A +L EM++ L VT + L + +
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 357 EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
++ + + + + + +L++ + +D+ L + + + G+ P+
Sbjct: 692 NELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNG 745
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 170/372 (45%), Gaps = 39/372 (10%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
+ V++ +H L R D+A L + + T++ ++++ + + + L+
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNL 345
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGF 210
+ MEE G + + VL+ + CSQ + ++AR + G
Sbjct: 346 VKEMEE---TGIKPNIHTYTVLIDSLCSQCKFEKARELLG-------------------- 382
Query: 211 KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTI 270
+M+++G P+ +TYN I+ YCK+G D + ++E ME RK P
Sbjct: 383 --------------QMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 271 ETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDE 330
T LI G N KA + N++ R ++ D YN+LI RS + +SA L+
Sbjct: 429 RTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 331 MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFR 390
M ++ + D TY +M L +S +E +L+ + Q+ P L+ +C+ +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 391 LDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLM 450
+D + + ++ K P++ + LI GLC+ G++ EA ++M++ G + ++ +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 451 LERFLLQSGDID 462
L LL+ GD D
Sbjct: 608 LIHRLLKDGDFD 619
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 153/335 (45%), Gaps = 11/335 (3%)
Query: 136 SKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS- 194
S I Y +D F+ E G + L+ C R++ EA +F KM
Sbjct: 258 SLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDD 317
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
P ++ +L+ S + EM + G P+ TY + ID+ C + +F
Sbjct: 318 ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 255 LRLLEEMERRKFVPTIETITTLIHGA---GIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
LL +M + +P + T LI+G G++++A +L + SR L +T YN L
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL---MESRKLSPNTRTYNEL 434
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I +S ++ A+ ++++M+E++V D VTY+++ G RS + L M R
Sbjct: 435 IKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
VP T ++ C++ R++ + L++ L +KG P+ LI G C G+V EA
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 432 CSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE 466
++ML + ++ +F L L G KLKE
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADG---KLKE 585
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 14/373 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDT 147
P+ ++ + + L F+KA LL + P++IT A+ ++ K ED
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL---INGYCKRGMIEDA 412
Query: 148 LDGFRRMEEDVFVGREF--GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
+D ME R+ T +N L+K +C + + +A V KM+ R PD + N
Sbjct: 413 VDVVELME-----SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G SG+ S M RG PD TY ID+ CK R + L + +E++
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
P + T LI G +A + ++ S+N + ++ +NALI L ++ A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L ++M++ ++ T + L++ + +Q+M P T ++
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
+C+ RL + + + E G P LI G GQ + AF+ K+M + G S
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Query: 445 AASFLMLERFLLQ 457
+FL L + LL+
Sbjct: 707 QHTFLSLIKHLLE 719
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 140/316 (44%), Gaps = 5/316 (1%)
Query: 126 ITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEA 185
+ + + +L+ +A++ ++ + M ED + +N ++ +C ++EA
Sbjct: 181 LIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIY---TYNKMVNGYCKLGNVEEA 237
Query: 186 RSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDT 244
K+V + PD + L++G+ + D+ S ++EM +G + V Y I
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 245 YCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVD 304
C R + + L +M+ + PT+ T T LI + +A L E+ + +
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
Y LI +L E A L+ +M+EK + + +TY+ + G + IE ++ +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
M R P TRT L+K +C++ + ++ + N ++E+ P + LI G C G
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 425 QVHEAFECSKQMLERG 440
A+ M +RG
Sbjct: 477 NFDSAYRLLSLMNDRG 492
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 133/320 (41%), Gaps = 22/320 (6%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L+ C+ ++KEA + KMV P + IL+ + GD + +M+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD TY I TYC++GR D ++ +M P + T ++LI G G +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSK------------------DIESALSLMD 329
A + + + +LI LL K + ++ + L++
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN--FVPQTRTVVMLMKYFCQ 387
+M+E V + +Y + LG+ + +++ M QRN P L+ C+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM-QRNEGISPSELVFNALLSCCCK 808
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
+ + + + + ++ G+ P + +LI GL +G+ + +L+ G + +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 448 FLMLERFLLQSGDIDKLKEL 467
+ ++ + + G ++ EL
Sbjct: 869 WKIIIDGVGKQGLVEAFYEL 888
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 173/381 (45%), Gaps = 42/381 (11%)
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+R PS++ + LS I K + ++ + ++ME +G FN+++ FC
Sbjct: 79 SRPFPSIVDFNRL---LSAIVKLKKYDVVISLGKKME---VLGIRNDLYTFNIVINCFCC 132
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
Q+ A S+ GKM+ + PD ++ L+ GF V+ +MV+ G+ PD V
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG------------------ 279
YN ID+ CK R D +E+ER+ P + T T L++G
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 280 ---------------AGIVQNAG--KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
V+N +A++LF E+ ++ D Y++LI L I+
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
A + D M+ K D V+Y+T+ G ++ +E +L+++M+QR V T T L+
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 383 KYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
+ F Q +D + ++ + G P ++L+ GLC G++ +A + M +R
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 443 MSAASFLMLERFLLQSGDIDK 463
+ ++ + R + ++G +++
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEE 453
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 154/349 (44%), Gaps = 15/349 (4%)
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
A + ++ + K + D D F+ +E G + L+ C+ + +A +
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERK---GIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 190 GKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
M+ + +P+ + + LL F ++G V + + EMV+ PD VTY+ I+ C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
R + ++ + M + + + + TLI+G + +LF E+ R LV +T Y
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N LI ++ D++ A +M + D TY+ + GL + +E +++ M +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
R T +++ C+ +++ + SL+ L KG P +++GLC++G +HE
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHE 488
Query: 429 AFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSV 477
+M + G LM L GDI EL IK +LS
Sbjct: 489 VEALYTKMKQEG--------LMKNDCTLSDGDITLSAEL---IKKMLSC 526
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 101/258 (39%), Gaps = 36/258 (13%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ +A +F MV SR P N LL + V +M G D T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ +C + L +L +M + + P TI +L++G
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG-------------------- 164
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
R + A+SL+D+M+E + D V Y+ + L ++ +
Sbjct: 165 ---------------FCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+ ++++ ++ P T L+ C + R + L + +++K P+ L+
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 420 LCSRGQVHEAFECSKQML 437
G+V EA E ++M+
Sbjct: 270 FVKNGKVLEAKELFEEMV 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ D + L +M + + P+I L+ ++ L ++ + D +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
+I + ALS++ +M++ E D VT ++ G R + L KM +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ P ++ C+ R++ + + + KG P+ L+ GLC+ + +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMIKNLLSVLP 479
M+++ + ++ L +++G + + KEL ++M++ +S+ P
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDP 293
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 179/391 (45%), Gaps = 12/391 (3%)
Query: 55 TSLVENVLGRLFASHSNGL-KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
+S + + +SN KALEFFN+ S + +F + IL + F+ +W
Sbjct: 43 SSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWA 102
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
L+ S+ I+ + ++ +D + ++ D F R+ F L+
Sbjct: 103 LINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKL--DDFNLRD--ETSFYNLV 158
Query: 174 KAFCSQRQMKEARSV-FGKMV--SRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
A C + + EA + FGK V + FS +TK N++L G+ + G + ++ +M
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE 218
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G + D +Y+I +D CK G+ ++L +EM+ R+ + T+I G Q
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
++F E+ R + +N +I L + A ++DEM ++ + D +TY +F
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
L + + I L+ +M + P+ T VMLM+ F + L L +W + E G P
Sbjct: 339 LEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPD 395
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ A + +I L +G + A E ++M+ERG
Sbjct: 396 SAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 166/393 (42%), Gaps = 43/393 (10%)
Query: 74 KALEFFNFTLHHSQS---PPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKA 130
+ LEF+++ ++ + + P+ +SF + + L ++R+ D+A E R P L
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI----EVFRGMPERKCLP- 220
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG 190
DG+ + L+ C + ++ EA +
Sbjct: 221 ------------------DGY----------------TYCTLMDGLCKEERIDEAVLLLD 246
Query: 191 KMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
+M S SP N+L+ G + GD+T V M +G P+ VTYN I C KG
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ + LLE M K +P T TLI+G + A A +L + + R ++ +Y+
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
LI+ L + E A+SL +M EK + + V Y + GL R E+ +M
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+P T LMK F + + ++ +W + + G + +LI GLC G+V EA
Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
+ML G ++ + + L G +D
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMD 519
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 130/301 (43%), Gaps = 17/301 (5%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ QR+ +A + M R + + ++L+ G + G + +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G P+ V Y++ +D C++G+ + +L M +P T ++L+ G
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A Q++ E+ + Y+ LI L ++ A+ + +M+ ++ D V Y ++
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 348 LGLMRSTGIEGVSELYQKM---AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
GL ++ +LY +M + P T +L+ C + ++ L N ++++
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 405 GYCPHAHALDLLITGL------CSRGQVHEAF--ECSKQMLERGRHMSAASF--LMLERF 454
G P + + L C +G+ +F E ++L+R R A + +ML ++
Sbjct: 570 GCDPDVITCNTFLNTLSEKSNSCDKGR---SFLEELVVRLLKRQRVSGACTIVEVMLGKY 626
Query: 455 L 455
L
Sbjct: 627 L 627
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 166/407 (40%), Gaps = 69/407 (16%)
Query: 102 LTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAK--------------------- 140
L R+ + + AW + QE +R+ I + ++IM++ + K
Sbjct: 210 LVRIGWVELAWGVYQEISRSGVG-INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 141 ----YQSFEDTLDGFRRMEE-----DVFVGREF--GTDEFNVLLKAFCSQRQMKEARSVF 189
Y + MEE + G+ F G +N ++ C + + A+ VF
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 190 GKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR------------------- 229
+M+ S SPD+ + LL+ + GDV E + +M R
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 230 ----------------GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETI 273
G PDNV Y I I YC+KG + L EM ++ + T
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 274 TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIE 333
T++HG + G+A +LFNE+ R L D+ LI + ++++A+ L +M E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 334 KRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDL 393
KR+ LD VTY+T+ G + I+ E++ M + +P + +L+ C L
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568
Query: 394 SLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ +W+ ++ K P + +I G C G + ++M+ G
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N +L C ++ + EA +F +M R PD+ ++ IL+ G + G++ + + +M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++ D VTYN +D + K G + +M ++ +PT + + L++ +
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A ++++E+ S+N+ + N++I RS + S +++MI + D ++Y+T+
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 348 LGLMRSTGIEGVSELYQKMA--QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
G +R + L +KM Q VP T ++ FC+ ++ + + ++E+G
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
P +I G S+ + EAF +ML+RG
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 141/310 (45%), Gaps = 3/310 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N+++ A C +M++ + ++ + PD + N L+ + G + + M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMP 297
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+GFSP TYN I+ CK G++ + EM R P T +L+ A +
Sbjct: 298 GKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVV 357
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ ++F+++ SR++V D ++++++ RS +++ AL + + E + D V Y +
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G R I L +M Q+ T ++ C+ L + L+N + E+
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P ++ L +LI G C G + A E ++M E+ + ++ L + GDID KE+
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 468 --DQMIKNLL 475
D + K +L
Sbjct: 538 WADMVSKEIL 547
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 147/308 (47%), Gaps = 4/308 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L++ +C + + A ++ +M+ + + D + N +L G + + + ++EM
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+R PD+ T I ID +CK G + + L ++M+ ++ + T TL+ G G V +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A++++ ++ S+ ++ Y+ L+ AL + A + DEMI K ++ + ++M
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK--G 405
G RS +KM FVP + L+ F + + + L + E+ G
Sbjct: 593 KGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKL 464
P + ++ G C + Q+ EA ++M+ERG + +++ M+ F+ Q +
Sbjct: 653 LVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 465 KELDQMIK 472
+ D+M++
Sbjct: 713 RIHDEMLQ 720
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 149/347 (42%), Gaps = 8/347 (2%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS 124
LF N KAL +FN ++ + P +V + + + R A L E + +
Sbjct: 384 LFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
+ + +I L + K + + F M E + +L+ C ++
Sbjct: 443 MDVVTYNTI-LHGLCKRKMLGEADKLFNEMTERALFPDSY---TLTILIDGHCKLGNLQN 498
Query: 185 ARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A +F KM R D + N LL GF + GD+ + + + +MV + P ++Y+I ++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
C KG + R+ +EM + PT+ ++I G NA ++ S V
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVEL--DGVTYHTMFLGLMRSTGIEGVSE 361
D YN LI +R +++ A L+ +M E++ L D TY+++ G R ++
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
+ +KM +R P T ++ F L + + + ++++G+ P
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 129/300 (43%), Gaps = 4/300 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F++L++ + R+++EA F + S+ F+ + N L+ G V Y E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G + T NI ++ CK G+ L +++ + P I T TLI
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A +L N +P + YN +I L + E A + EM+ + D TY ++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ + + +++ M R+ VP +M F ++ LD +L +N + E G
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQS---GDIDKL 464
P +LI G C +G + A +ML++G M ++ + L + G+ DKL
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 109/241 (45%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
PD IL+ G+ G ++ +EM+++G + D VTYN + CK+ G+ +L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
EM R P T+T LI G + N A +LF ++ + + +D YN L+ +
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
DI++A + +M+ K + ++Y + L + ++ +M +N P
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
++K +C++ S ++ +G+ P + + LI G + +AF K+M
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 438 E 438
E
Sbjct: 648 E 648
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 126/289 (43%), Gaps = 11/289 (3%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQE-TART-HPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V++ LH L + + +A L E T R P TL +I++ K + ++ ++
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL---TILIDGHCKLGNLQNAMEL 502
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
F++M+E +N LL F + A+ ++ MVS+ P S +IL+
Sbjct: 503 FQKMKEKRI---RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNA 559
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
G + + EM+ + P + N I YC+ G DG LE+M FVP
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPD 619
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSR--NLVVDTGVYNALITALLRSKDIESALSL 327
+ TLI+G +N KA L ++ LV D YN+++ R ++ A +
Sbjct: 620 CISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVV 679
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
+ +MIE+ V D TY M G + + ++ +M QR F P +
Sbjct: 680 LRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 22/356 (6%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQR 180
P++ T M I + SF D R + + + RE D FN L+ A +
Sbjct: 329 PNVFTYNCM------IDGFCSFGRWSDAQRLLRD--MIEREINPDVLTFNALISASVKEG 380
Query: 181 QMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ EA + +M+ R PDT + N ++ GF + + + M SPD VT+N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFN 436
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
ID YC+ R +G++LL E+ RR V T TLIHG V N A+ LF E+ S
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
+ DT N L+ ++ +E AL L + + +++LD V Y+ + G+ + + ++
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+L+ + P +T +++ FC + + L++ + + G+ P + LI G
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLL 475
G++ ++ E +M G A + M E + + D +++I+N L
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD-------EEIIENYL 665
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 32/295 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L+ C + ++ EA ++ KMV + D + ++ G + GD S +M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ PD V Y+ ID CK G D L EM + P + T +I G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A++L ++ R + D +NALI+A ++ + A L DEM+ + + D VTY++M
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 348 LGLMRSTGIEGVSELYQKMA-------------------------------QRNFVPQTR 376
G + + ++ MA +R V T
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
T L+ FC+ L+ + L+ ++ G CP ++L+ G C ++ EA E
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 148/344 (43%), Gaps = 24/344 (6%)
Query: 116 QETARTHPSL--ITLKAMSIMLSKIAKY-QSFEDTLDGFRRMEEDVFVGREFGTD-EFNV 171
++ ++ PSL +T + + L + Y +S +D +D F M R F T + N
Sbjct: 56 EKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVR----SRPFYTAVDCNK 111
Query: 172 LLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
++ F + A S++ KM + R + S NIL+ F + ++ + ++ K G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV---------------PTIETITT 275
F PD VT+N + C + R + L L M F+ P + T T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
LI+G + +A L N++ + L +D Y ++ + + D +SAL+L+ +M E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
++ D V Y + L + L+ +M ++ P T ++ FC R +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
L ++E+ P + LI+ G++ EA + +ML R
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 22/287 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFK---------------- 211
FN+L+K FC ++ + S FGK+ F PD + N LL G
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
E+G + +V LF +MV+ G +P +T+N I+ C +GR + L+ +M + +
Sbjct: 204 ETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T T+++G + + A L +++ ++ D +Y+A+I L + A L EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
+EK + + TY+ M G L + M +R P T L+ + +L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+ L + ++ + P + +I G C H F+ +K M +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK----HNRFDDAKHMFD 425
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 13/245 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P V++ ++ + FD A + A P ++T + I Y + +
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS--PDVVTFNTI------IDVYCRAKRVDE 450
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
G + + E G T +N L+ FC + A+ +F +M+S PDT + NILL
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLY 510
Query: 209 GFKESGDV-TSVELFYHEMVKRG-FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
GF E+ + ++ELF E+++ D V YNI I CK + + L +
Sbjct: 511 GFCENEKLEEALELF--EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P ++T +I G A LF+++ D YN LI L++ +I+ ++
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628
Query: 327 LMDEM 331
L+ EM
Sbjct: 629 LISEM 633
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 173/379 (45%), Gaps = 19/379 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ ++ L + D A LL E + ++ S ++ + KY+ +D
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY---STVIDSLCKYRHVDDA 259
Query: 148 LDGFRRMEE-----DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
L+ F M+ DVF ++ L+ C+ + +A + M+ R +P+
Sbjct: 260 LNLFTEMDNKGIRPDVFT--------YSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
+ N L+ F + G + E + EM++R P+ VTYN I+ +C R + ++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
+ +P + T TLI+G + +LF ++ R LV +T Y LI ++ D
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
++A + +M+ V + +TY+T+ GL ++ +E +++ + + P T ++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+ C+ +++ L+ L KG P A + +I+G C +G EA+ +M E G
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 442 HMSAASFLMLERFLLQSGD 460
+ ++ L R L+ GD
Sbjct: 552 LPDSGTYNTLIRAHLRDGD 570
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 164/378 (43%), Gaps = 5/378 (1%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFE 145
S+ PS V F L + +M+ FD + E L +IM++ + +
Sbjct: 59 SRPFPSIVEFSKLLSAIAKMKKFDLV-ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLS 117
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L +M + +G N LL FC ++ EA ++ +MV + PDT +
Sbjct: 118 FALAILGKMMK---LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 174
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G + + MV +G PD VTY I+ CK+G L LL +ME+
Sbjct: 175 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 234
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
K + +T+I ++ A LF E+ ++ + D Y++LI+ L A
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L+ +M+E+++ + VT++++ + + +L+ +M QR+ P T L+
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
FC + RLD + ++ +V K P + LI G C +V + E + M RG +
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 445 AASFLMLERFLLQSGDID 462
++ L Q+ D D
Sbjct: 415 TVTYTTLIHGFFQASDCD 432
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 14/376 (3%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V + + L + R+ D A L E P + T S ++S + Y + D
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY---SSLISCLCNYGRWSDA--- 294
Query: 151 FRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILL 207
R+ D+ + R+ + FN L+ AF + ++ EA +F +M+ R P+ + N L+
Sbjct: 295 -SRLLSDM-LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
GF + + + MV + PD VTYN I+ +CK + DG+ L +M RR V
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
T TTLIHG + A+ +F ++ S + + YN L+ L ++ +E A+ +
Sbjct: 413 GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
+ + + ++E D TY+ M G+ ++ +E +L+ ++ + P ++ FC+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
+ + +L+ + E G P + + LI G + E K+M R AS
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDAS 591
Query: 448 FLMLERFLLQSGDIDK 463
L +L G +DK
Sbjct: 592 TYGLVTDMLHDGRLDK 607
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 2/294 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ EA +FG+MV SR P + LL + V F +M G S + TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I+ C++ + L +L +M + + P+I T+ +L++G +A L +++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
DT + L+ L + A++L++ M+ K + D VTY + GL + +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
L KM + ++ C+ +D +L+L+ + KG P LI+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKLKELDQMIK 472
LC+ G+ +A MLER + + +F +++ F + I+ K D+MI+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 159/344 (46%), Gaps = 16/344 (4%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQR 180
P++ T M I + SF D R + + + RE D FN L+ A +
Sbjct: 329 PNVFTYNCM------IDGFCSFGRWSDAQRLLRD--MIEREINPDVLTFNALISASVKEG 380
Query: 181 QMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
++ EA + +M+ R PDT + N ++ GF + + + M SPD VT+N
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFN 436
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
ID YC+ R +G++LL E+ RR V T TLIHG V N A+ LF E+ S
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 496
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
+ DT N L+ ++ +E AL L + + +++LD V Y+ + G+ + + ++
Sbjct: 497 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 556
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+L+ + P +T +++ FC + + L++ + + G+ P + LI G
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
G++ ++ E +M G A + M+ L+ G +DK
Sbjct: 617 CLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDK 659
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 13/378 (3%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V++ ++ + +M A LL + TH P ++ A+ + ++ K D
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI---IDRLCKDGHHSDAQYL 318
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
F M E F +N ++ FCS + +A+ + M+ R +PD + N L+
Sbjct: 319 FSEMLEKGIAPNVF---TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
+ G + E EM+ R PD VTYN I +CK RF D + + M P
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PD 431
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
+ T T+I + + QL EI R LV +T YN LI ++ +A L
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
EMI V D +T + + G + +E EL++ + T +++ C+
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGS 551
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
++D + L+ L G P +++I+G C + + +A +M + G +++
Sbjct: 552 KVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYN 611
Query: 450 MLERFLLQSGDIDKLKEL 467
L R L++G+IDK EL
Sbjct: 612 TLIRGCLKAGEIDKSIEL 629
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 32/295 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L+ C + ++ EA ++ KMV + D + ++ G + GD S +M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ PD V Y+ ID CK G D L EM + P + T +I G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A++L ++ R + D +NALI+A ++ + A L DEM+ + + D VTY++M
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 348 LGLMRSTGIEGVSELYQKMA-------------------------------QRNFVPQTR 376
G + + ++ MA +R V T
Sbjct: 409 YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTT 468
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
T L+ FC+ L+ + L+ ++ G CP ++L+ G C ++ EA E
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 148/344 (43%), Gaps = 24/344 (6%)
Query: 116 QETARTHPSL--ITLKAMSIMLSKIAKY-QSFEDTLDGFRRMEEDVFVGREFGTD-EFNV 171
++ ++ PSL +T + + L + Y +S +D +D F M R F T + N
Sbjct: 56 EKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYMVR----SRPFYTAVDCNK 111
Query: 172 LLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
++ F + A S++ KM + R + S NIL+ F + ++ + ++ K G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV---------------PTIETITT 275
F PD VT+N + C + R + L L M F+ P + T T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
LI+G + +A L N++ + L +D Y ++ + + D +SAL+L+ +M E
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
++ D V Y + L + L+ +M ++ P T ++ FC R +
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
L ++E+ P + LI+ G++ EA + +ML R
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 125/287 (43%), Gaps = 22/287 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFK---------------- 211
FN+L+K FC ++ + S FGK+ F PD + N LL G
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
E+G + +V LF +MV+ G +P +T+N I+ C +GR + L+ +M + +
Sbjct: 204 ETGFLEAVALF-DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 262
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T T+++G + + A L +++ ++ D +Y+A+I L + A L EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
+EK + + TY+ M G L + M +R P T L+ + +L
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+ L + ++ + P + +I G C H F+ +K M +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK----HNRFDDAKHMFD 425
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 152/357 (42%), Gaps = 48/357 (13%)
Query: 123 PSLITLKAMSIMLSKIAKYQ---SFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQ 179
PS++TL ++ + ++Q S D++DGF + V +N ++ C
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI---------YNTVINGLCKN 197
Query: 180 RQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
R + A VF M + D + N L+ G SG T +MVKR P+ + +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
IDT+ K+G + L +EM RR VP + T +LI+G I G A+ +F+ + S
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ D YN LIT +SK +E + L EM + + D TY+T+ G ++ +
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL----------------------- 395
+++ +M P T +L+ C N +++ +L
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Query: 396 ------------SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L+ L KG P A A +I+GLC +G EA + ++M E G
Sbjct: 438 GLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 184/410 (44%), Gaps = 10/410 (2%)
Query: 85 HSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSF 144
S+ PS V F L ++ +M FD L + S L + +I++ +
Sbjct: 72 QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISH-DLYSFTILIHCFCRCSRL 130
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
L +M + +G LL FC + +EA S+ M F P+
Sbjct: 131 SLALALLGKMMK---LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
N ++ G ++ D+ + ++ M K+G D VTYN I GR+ D RLL +M +
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVK 247
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
RK P + T LI N +AR L+ E+ R++V + YN+LI +
Sbjct: 248 RKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD 307
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A + D M+ K D VTY+T+ G +S +E +L+ +M + V T L+
Sbjct: 308 AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIH 367
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
+CQ +L+++ ++N +V+ G P ++L+ LC+ G++ +A + + + +
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 444 SAASFLMLERFLLQSGDIDKLKELDQMIKNLL--SVLPPSKGHATGSSNL 491
++ ++ + L ++ DKLKE + ++L V P + + T S L
Sbjct: 428 DIITYNIIIQGLCRT---DKLKEAWCLFRSLTRKGVKPDAIAYITMISGL 474
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 1/261 (0%)
Query: 181 QMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
+ +A S+F +M+ SR P +L + V YH+M G S D ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I I +C+ R L LL +M + F P+I T+ +L++G +A L + +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
V + +YN +I L +++D+ +AL + M +K + D VTY+T+ GL S
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+ L + M +R P L+ F + L + +L+ ++ + P+ + LI G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 420 LCSRGQVHEAFECSKQMLERG 440
C G + +A M+ +G
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKG 319
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 180/410 (43%), Gaps = 42/410 (10%)
Query: 71 NGLKALEFFN----FT-LHHSQSPPSHVSFEMTLHILTRMRYFDKAWML---LQETARTH 122
NGL +L+F FT + S+ PS + F L+++ +M+ FD L LQ +H
Sbjct: 46 NGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH 105
Query: 123 PSLITLKAM-------------SIMLSKIAKYQ------SFEDTLDGF---RRMEED--- 157
L T + S L K+ K +F ++GF RMEE
Sbjct: 106 -DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSM 164
Query: 158 ----VFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKE 212
V +G + + ++ + C + A S+F +M + PD L+ G
Sbjct: 165 VNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIET 272
SG + M KR PD +T+N ID + K+G+F D L EM R P I T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
T+LI+G + +ARQ+F + ++ D Y +LI + K ++ A+ + EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
+K + + +TY T+ G + E++ M R P RT +L+ C N ++
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 393 LSLSLWNYLVEK---GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+L ++ + ++ G P+ ++L+ GLC G++ +A + M +R
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 31/367 (8%)
Query: 82 TLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKY 141
T+ S HV++ ++L FD+ E P ++ ++ L ++
Sbjct: 182 TIIDSLCKNGHVNYALSL--------FDQ-----MENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 142 QSFEDTLDGF--RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSP 198
+ + L G R+++ DV FN L+ AF + + +A ++ +M+ +P
Sbjct: 229 RDADSLLRGMTKRKIKPDVIT--------FNALIDAFVKEGKFLDAEELYNEMIRMSIAP 280
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
+ + L+ GF G V ++ M +G PD V Y I+ +CK + D +++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
EM ++ T TTLI G G V A+++F+ + SR + + YN L+ L +
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 319 KDIESALSLMDEMIEKRVELDGV-----TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
++ AL + ++M +KR E+DGV TY+ + GL + +E +++ M +R
Sbjct: 401 GKVKKALMIFEDM-QKR-EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
T ++++ C+ ++ +++L+ L KG P+ +I+GL G HEA
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 434 KQMLERG 440
++M E G
Sbjct: 519 RKMKEDG 525
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 24/292 (8%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWML--LQE 117
N L F L A E +N + S +P + ++ ++ D+A + L E
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAP-NIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 118 TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFC 177
T P ++ A + +++ K + +D + F M + G T + L++ F
Sbjct: 310 TKGCFPDVV---AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN---TITYTTLIQGFG 363
Query: 178 SQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR---GFSP 233
+ A+ VF MVSR P+ ++ N+LL +G V + + +M KR G +P
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAP 423
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQNAGKAR 290
+ TYN+ + C G+ L + E+M +R+ I T T +I G AG V+N A
Sbjct: 424 NIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN---AV 480
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
LF +PS+ + + Y +I+ L R A L +M E DGV+
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE-----DGVS 527
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 174/388 (44%), Gaps = 5/388 (1%)
Query: 81 FTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAK 140
F + HSQ PS V F L +R ++ Q+ S L + +I++ +
Sbjct: 60 FEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH-DLYSFTILIHCFCR 118
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPD 199
L +M + +G E F LL FC ++ +A S+ MV S + P+
Sbjct: 119 CSRLSFALSVLGKMMK---LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPN 175
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
N L+ G ++G++ +EM K+G D VTYN + C GR+ D R+L
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLR 235
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
+M +R P + T T LI N +A++L+ E+ ++ + YN++I L
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
+ A D M K + VTY+T+ G + ++ +L+Q+M+ F T
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
L+ +CQ +L ++L ++ ++V + P +L+ GLC G++ A M E
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRES 415
Query: 440 GRHMSAASFLMLERFLLQSGDIDKLKEL 467
+++ ++ ++ L ++ ++K EL
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 164/368 (44%), Gaps = 12/368 (3%)
Query: 108 FDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD 167
F+ A+ L E + P L ++ + +L+ A + +E + ++ME G
Sbjct: 52 FEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKME---LYGISHDLY 107
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGF---KESGDVTSVELFY 223
F +L+ FC ++ A SV GKM+ + P + LL GF GD S+ +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL- 166
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
MVK G+ P+ V YN ID CK G L LL EME++ + T TL+ G
Sbjct: 167 --MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
A ++ ++ R++ D + ALI ++ +++ A L EMI+ V+ + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+++ GL + + + MA + P T L+ FC+ +D + L+ +
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+G+ + LI G C G++ A + M+ R + +L L +G+I+
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 464 -LKELDQM 470
L + D M
Sbjct: 405 ALVKFDDM 412
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 148/356 (41%), Gaps = 13/356 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAW--MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
PS V+F LH + A+ ++L + P+++ + + + K
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTL---IDGLCKNGELNIA 195
Query: 148 LDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L+ ME+ + G D +N LL C + +A + M+ R +PD +
Sbjct: 196 LELLNEMEK-----KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ F + G++ + Y EM++ P+NVTYN I+ C GR D + + M +
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
P + T TLI G + + +LF + D YN LI + + A
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L + M+ +RV D +T+ + GL + IE + M + +++
Sbjct: 371 LDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHG 430
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
C+ +++ + L+ L +G P A ++I GLC G EA E ++M E G
Sbjct: 431 LCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 8/271 (2%)
Query: 106 RYFDKAWMLLQETART-HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREF 164
R+ D A ML R+ +P ++T A+ + K + ++ + ++ M + +
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTAL---IDVFVKQGNLDEAQELYKEMIQSSV---DP 279
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFY 223
+N ++ C ++ +A+ F M S+ P+ + N L+ GF + V +
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
M GF+ D TYN I YC+ G+ L + M R+ P I T L+HG +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
A F+++ + YN +I L ++ +E A L + + V+ D TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
M LGL ++ EL ++M + + Q
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQ 490
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 9/381 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
PS ++ + L + R D LL+E T P++ T +I + + + +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF---TICIRVLGRAGKINEA 277
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNIL 206
+ +RM+ D G + T + VL+ A C+ R++ A+ VF KM R PD + L
Sbjct: 278 YEILKRMD-DEGCGPDVVT--YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITL 334
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L F ++ D+ SV+ F+ EM K G PD VT+ I +D CK G FG+ L+ M +
Sbjct: 335 LDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
+P + T TLI G V A +LF + S + Y I +S D SAL
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
++M K + + V + L ++ +++ + VP + T M+MK +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
+ +D ++ L + ++E G P ++ LI L +V EA++ +M E +
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 447 SFLMLERFLLQSGDIDKLKEL 467
++ L L ++G I + EL
Sbjct: 575 TYNTLLAGLGKNGKIQEAIEL 595
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 9/292 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P ++ L + D+ + L +E + TH +I++S + K + +D LD
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALD 876
Query: 150 GFRRMEEDVFVGREFGTDE--FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
+ + D R+F + L+ ++ EA+ +F M+ P+ NIL
Sbjct: 877 LYYDLMSD----RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ GF ++G+ + + MVK G PD TY++ +D C GR +GL +E++
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIP-SRNLVVDTGVYNALITALLRSKDIESAL 325
P + +I+G G +A LFNE+ SR + D YN+LI L + +E A
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ +E+ +E + T++ + G S E +YQ M F P T T
Sbjct: 1053 KIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 9/350 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ L + R D E + P ++T + L K + DT
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNIL 206
LD R G +N L+ ++ +A +FG M S P + +
Sbjct: 386 LDVMRDQ------GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ + +SGD S + +M +G +P+ V N + + K GR + ++ ++
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
VP T ++ V +A +L +E+ D V N+LI L ++ ++ A
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ M E +++ VTY+T+ GL ++ I+ EL++ M Q+ P T T L C
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+N + L+L + +++ G P + +I GL GQV EA QM
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 3/262 (1%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
+++ C + AR++F K P + N+L+ G E+ + + + ++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G PD TYN +D Y K G+ + L +EM + T +I G N A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 290 RQLFNEIPS-RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
L+ ++ S R+ Y LI L +S + A L + M++ + Y+ +
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
G ++ + L+++M + P +T +L+ C R+D L + L E G P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Query: 409 HAHALDLLITGLCSRGQVHEAF 430
+L+I GL ++ EA
Sbjct: 995 DVVCYNLIINGLGKSHRLEEAL 1016
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 130/307 (42%), Gaps = 2/307 (0%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYH 224
T+ + + K+ + +K+A KM F + S N L+ +S T Y
Sbjct: 153 TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 212
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
M+ GF P TY+ + K+ + LL+EME P + T T I G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A ++ + D Y LI AL ++ ++ A + ++M R + D VTY
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYI 332
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ + ++ V + + +M + VP T +L+ C+ + + + ++
Sbjct: 333 TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD-IDK 463
G P+ H + LI GL ++ +A E M G +A ++++ + +SGD +
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 464 LKELDQM 470
L+ ++M
Sbjct: 453 LETFEKM 459
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 176/393 (44%), Gaps = 31/393 (7%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ M + +++ D+A LL E P +I + ++ ++ + K ++
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL---INTLYKADRVDEA 557
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
F RM+E + + +N LL +++EA +F MV + P+T + N L
Sbjct: 558 WKMFMRMKE---MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
++ +VT +M+ G PD TYN I K G+ + + +M++ +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 267 VPTIETITTLIHG---AGIVQNAGK--ARQLFN--EIPSRNLVVDTGVYNALITALLRSK 319
P T+ TL+ G A ++++A K L+N + P+ NL + LI ++L
Sbjct: 675 -PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA-NL-----FWEDLIGSILAEA 727
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST----GIEGVSELYQKMAQRNFV-PQ 374
I++A+S + ++ + DG ++ + ++R + + G L++K + V P+
Sbjct: 728 GIDNAVSFSERLVANGICRDG---DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
T +L+ + ++++ ++ + G P + L+ G++ E FE K
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 435 QMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+M + + ++ L+++G++D +L
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 162/370 (43%), Gaps = 13/370 (3%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAM 131
+A+E F + + P + L +L+R+ + AW+ + R ++ T M
Sbjct: 173 EAIECF-YLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 231
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+L K K + + GF + E VF G + +N L++ F + +++ AR + +
Sbjct: 232 INVLCKEGKLKKAK----GFLGIME-VF-GIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M S+ F PD ++ N +L G + V EM + G PD+V+YNI I G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+EM ++ VPT T TLIHG + A L EI + +V+D+ YN
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
LI + D + A +L DEM+ ++ TY ++ L R EL++K+ +
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
P + LM C +D + SL + P + L+ GLC G+ EA
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 431 ECSKQMLERG 440
E +M RG
Sbjct: 523 ELMGEMKRRG 532
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 37/342 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F++L++ C R + EA F M + F P T++ N +L + + +FY +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI----- 282
+ + T+NI I+ CK+G+ L ME PTI T TL+ G +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 283 ---------------------------VQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
+ N G+A ++ E+ LV D+ YN LI
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 316 LRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT 375
+ D+E A + DEM+++ + TY+T+ GL IE L +++ ++ V +
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 376 RTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQ 435
T +L+ +CQ+ + +L + ++ G P LI LC + + EA E ++
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 436 MLERGRHMSAASFLMLERFLLQSGDIDK----LKELDQMIKN 473
++ +G L G++D+ LKE+D M N
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
D+ + NIL+ G+ + GD + EM+ G P TY I C+K + + L
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
E++ + P + + TL+ G + N +A L E+ ++ D YN L+ L
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
E A LM EM + ++ D ++Y+T+ G + + + +M F P T
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
L+K +N +L+ L + +G P+
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N L+ C+ M A S+ +M + +PD + N L+ G G EM +
Sbjct: 471 NTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKR 530
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
RG PD+++YN I Y KKG + +EM F PT+ T L+ G Q
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITAL 315
A +L E+ S +V + + ++I A+
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 142/310 (45%), Gaps = 4/310 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN+L+ FC + + +A+ VF ++ R P S N L+ G+ + G++ H+M
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K PD TY+ I+ CK+ + L +EM +R +P TTLIHG
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
++ + ++ S+ L D +YN L+ ++ D+ +A +++D MI + + D +TY T+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G R +E E+ ++M Q L+ C+ R+ + ++ G
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P +++ C +G F+ K+M G S ++ +L L + G ++K
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG---QMKNA 539
Query: 468 DQMIKNLLSV 477
D ++ +L++
Sbjct: 540 DMLLDAMLNI 549
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 123/252 (48%), Gaps = 1/252 (0%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
FY E++ GF + +NI ++ +CK+G D ++ +E+ +R PT+ + TLI+G
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
V N + +L +++ D Y+ALI AL + ++ A L DEM ++ + + V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+ T+ G R+ I+ + E YQKM + P L+ FC+N L + ++ + +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD- 460
+ +G P LI G C G V A E K+M + G + F L + + G
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 461 IDKLKELDQMIK 472
ID + L +M++
Sbjct: 467 IDAERALREMLR 478
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 120/312 (38%), Gaps = 52/312 (16%)
Query: 138 IAKYQSFEDTLDGFR--------RMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
I Y + +GFR R DVF ++ L+ A C + +M A +F
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFT--------YSALINALCKENKMDGAHGLF 333
Query: 190 GKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
+M R P+ L+ G +G++ ++ Y +M+ +G PD V YN ++ +CK
Sbjct: 334 DEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN 393
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
G +++ M RR P T TTLI G
Sbjct: 394 GDLVAARNIVDGMIRRGLRPDKITYTTLIDG----------------------------- 424
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
R D+E+AL + EM + +ELD V + + G+ + + ++M +
Sbjct: 425 ------FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
P T M+M FC+ L + G+ P ++L+ GLC GQ+
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 429 AFECSKQMLERG 440
A ML G
Sbjct: 539 ADMLLDAMLNIG 550
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 125/313 (39%), Gaps = 18/313 (5%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVE 220
G F + + VL + EA+S+ +VSR ++ S S ++ VE
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSAS----------SVFISLVE 162
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
+ M GF D + TY G D ++ + +F I L+
Sbjct: 163 MRVTPMC--GFLVDALMI-----TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRM 215
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ G + EI ++ V+N L+ + +I A + DE+ ++ ++
Sbjct: 216 MKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTV 275
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
V+++T+ G + ++ L +M + P T L+ C+ ++D + L++
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+ ++G P+ LI G G++ E ++ML +G + L ++GD
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 461 IDKLKEL-DQMIK 472
+ + + D MI+
Sbjct: 396 LVAARNIVDGMIR 408
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSV 219
G E F+ L+ C + ++ +A +M+ + PD + +++ F + GD +
Sbjct: 445 GIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
EM G P VTYN+ ++ CK G+ + LL+ M VP T TL+ G
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR-SKD 320
N+ K + + P +V D Y +++ L R SKD
Sbjct: 565 HHRHANSSKR---YIQKPEIGIVADLASYKSIVNELDRASKD 603
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 6/308 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+NVL+K C +++ ++AR M F PD S + ++ ++G + + EM
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE-MERRKFVPTIETITTLIHGAGIVQNA 286
+RG +PD YNI ID + K+ + L + +E P ++T +I G
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+++ + D Y++LI L + +++ A S+ +E+ E++ +D VTY+TM
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
G R I+ EL++ M +N V + +L+K +N ++D + +W + KGY
Sbjct: 332 LGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE 466
+ I GLC G V++A +++ G H+ ++ + L + +L+E
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKK---KRLEE 447
Query: 467 LDQMIKNL 474
++K +
Sbjct: 448 ASNLVKEM 455
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 167/384 (43%), Gaps = 35/384 (9%)
Query: 112 WMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM-----EEDVFV------ 160
W L E + +P++ K +IM+S ++K +D L + RM E+D++
Sbjct: 242 WDRLLEDSSVYPNV---KTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 161 -------------------GREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSRFSPD 199
R+ D +N +L FC ++KE+ ++ M + S +
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN 358
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
S NIL+ G E+G + + + M +G++ D TY I I C G L +++
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
E+E + ++I + +A L E+ + +++ V NALI L+R
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
+ A + EM + V+Y+ + GL ++ S ++M + + P +T
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+L+ C++ ++DL+L LW+ ++ G ++LI GLCS G++ +A M R
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Query: 440 GRHMSAASFLMLERFLLQSGDIDK 463
+ ++ L + GD ++
Sbjct: 599 NCTANLVTYNTLMEGFFKVGDSNR 622
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 12/318 (3%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
++K + +A VF +M F P +S N LL F E+ VE +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G +P+ TYN+ I CKK F L+ M + F P + + +T+I+ A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV-TYHTMFL 348
+LF+E+ R + D YN LI L+ KD ++A+ L D ++E V T++ M
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL + ++ +++++M Q T L+ C +D + S++N L E+
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELD 468
+ ++ G C G++ E+ E + ++E ++ S+ +L + LL++G ID+
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEA---- 378
Query: 469 QMIKNLLSVLPPSKGHAT 486
MI L+ P+KG+A
Sbjct: 379 TMIWRLM----PAKGYAA 392
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 3/272 (1%)
Query: 154 MEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKS--MNILLLGFK 211
M+E G + ++ C +++++EA ++ +M S+ + S N L+ G
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM-SKHGVELNSHVCNALIGGLI 475
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
+ F EM K G P V+YNI I CK G+FG+ ++EM + P ++
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T + L+ G + A +L+++ L D ++N LI L ++ A+++M M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
+ + VTY+T+ G + + ++ M + P + +MK C +
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
++ ++ G P + ++L+ + +R
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
L+K F + R + +A V + PD + N L+ GF + + M + F
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF 189
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
SPD VTYNI I + C +G+ L++L ++ PT+ T T LI + +A +
Sbjct: 190 SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALK 249
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
L +E+ SR L D YN +I + + ++ A ++ + K E D ++Y+ + L+
Sbjct: 250 LMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALL 309
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
E +L KM P T +L+ C++ +++ +++L + EKG P A+
Sbjct: 310 NQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ D LI C G++ A E + M+ G ++ + L ++G D+ E+
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 145/315 (46%), Gaps = 3/315 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ FC ++ +A V +M S+ FSPDT + NI++ G + ++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
P +TY I I+ +G + L+L++EM R P + T T+I G
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A ++ + + D YN L+ ALL E LM +M ++ + + VTY +
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
L R IE L + M ++ P + L+ FC+ RLD+++ ++ G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P + ++ LC G+ +A E ++ E G +++S+ + L SG DK++ L
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG--DKIRAL 458
Query: 468 DQMIKNLLSVLPPSK 482
+++ + + + P +
Sbjct: 459 HMILEMMSNGIDPDE 473
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 2/294 (0%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSV 219
G E +N+LL+A +Q + +E + KM S + P+ + +IL+ G +
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
M ++G +PD +Y+ I +C++GR + LE M +P I T++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
A +A ++F ++ ++ YN + +AL S D AL ++ EM+ ++ D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
+TY++M L R ++ EL M F P T +++ FC+ R++ ++++
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLER 453
+V G P+ +LI G+ G EA E + ++ R +S SF L R
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV-RIDAISEYSFKRLHR 585
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 22/348 (6%)
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE--FNVLLKAFCSQRQMKEARS 187
A + +++ K +D RM ++F D +N+++ + CS+ ++ A
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRS-----KDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 188 VFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
V +++S P + IL+ G V EM+ RG PD TYN I C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ-------LFNEIPSR 299
K+G ++ +E + P + + L+ + N GK + +F+E
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRA---LLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
N+V Y+ LIT L R IE A++L+ M EK + D +Y + R ++
Sbjct: 332 NVV----TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
E + M +P ++ C+N + D +L ++ L E G P++ + + + +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
L S G A +M+ G ++ + L + G +D+ EL
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 123/275 (44%), Gaps = 4/275 (1%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
DT+ + I + + S+ L MV++G++PD + I + +R++
Sbjct: 89 DTQMLKIFHRSCRSGNYIESLHLL-ETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 259 EEMERRKF-VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
E +E KF P + LI+G + A ++ + + S++ DT YN +I +L
Sbjct: 148 EILE--KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS 205
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
++ AL ++++++ + +TY + M G++ +L +M R P T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+++ C+ +D + + L KG P + ++L+ L ++G+ E + +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 438 ERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+ ++ +L L + G I++ L +++K
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ C + +EA GKMV+ PD+ + N L+ G+ + G V E + V
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
GF PD TY ID C +G L L E + P + TLI G + N G
Sbjct: 349 FNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG---LSNQG 405
Query: 288 ---KARQLFNEIPSRNLVVDTGVYNALITALLR---------------SK---------- 319
+A QL NE+ + L+ + +N L+ L + SK
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 320 ----------DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
+E+AL ++D M++ V+ D TY+++ GL +++ E V E Y+ M ++
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
P T +L++ C+ +LD +L L + K P A LI G C G + A
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 430 FECSKQMLE 438
+ ++M E
Sbjct: 586 YTLFRKMEE 594
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 141/306 (46%), Gaps = 1/306 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRF-SPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N+ ++ C + ++ A + G ++ + PD + N L+ G ++ E++ +MV
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD+ TYN I YCK G R++ + FVP T +LI G
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A LFNE + + + +YN LI L I A L +EM EK + + T++ +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL + + L + M + + P T +L+ + +++ +L + + +++ G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P + + L+ GLC + + E K M+E+G + +F +L L + +D+ L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 468 DQMIKN 473
+ +KN
Sbjct: 554 LEEMKN 559
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 154/342 (45%), Gaps = 13/342 (3%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLI-TLKAMS 132
+AL FN L P + + + + L+ +A L E + LI ++ +
Sbjct: 374 RALALFNEALGKGIKP-NVILYNTLIKGLSNQGMILEAAQLANEM--SEKGLIPEVQTFN 430
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFG 190
I+++ + K D DG + V + + + D FN+L+ + +Q +M+ A +
Sbjct: 431 ILVNGLCKMGCVSDA-DGLVK----VMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 191 KMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
M+ PD + N LL G ++ V Y MV++G +P+ T+NI +++ C+
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP-SRNLVVDTGVY 308
+ + L LLEEM+ + P T TLI G + A LF ++ + + T Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N +I A ++ A L EM+++ + DG TY M G ++ + + +M +
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
F+P T+ ++ C R+ + + + +V+KG P A
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 37/309 (11%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+K +Q + EA + +M + P+ ++ NIL+ G + G V+ + M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G+ PD T+NI I Y + + + L +L+ M P + T +L++G
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ + + + + +N L+ +L R + ++ AL L++EM K V D VT+ T+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 348 LGLMRSTGIEGV------------------------------------SELYQKMAQRNF 371
G ++ ++G +L+Q+M R
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P T +++ FC+ ++L ++E G+ P L +I LC +V+EA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 432 CSKQMLERG 440
+M+++G
Sbjct: 694 IIHRMVQKG 702
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 157/389 (40%), Gaps = 12/389 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKA---WMLLQETARTHPSLITLKAMSIMLSKIAKYQSFED 146
P+ S+ + +L YFD+A +M +++ T P + + +I + K
Sbjct: 109 PTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGIT-PDVYSF---TIRMKSFCKTSRPHA 164
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNI 205
L M G E + ++ F + E +FGKM+ S S + N
Sbjct: 165 ALRLLNNMSSQ---GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
LL + GDV E +++KRG P+ TYN+ I C++G +R++ + +
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P + T LI+G +A ++ + L D+ YN LI + ++ A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
++ + + D TY ++ GL L+ + + P L+K
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 386 CQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSA 445
+ + L N + EKG P ++L+ GLC G V +A K M+ +G
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461
Query: 446 ASF-LMLERFLLQSGDIDKLKELDQMIKN 473
+F +++ + Q + L+ LD M+ N
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDN 490
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 28/301 (9%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETA 119
N+L +++ ALE + L + P + ++ L+ L + F+ + ET
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVY-TYNSLLNGLCKTSKFED----VMETY 519
Query: 120 RT------HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE--FNV 171
+T P+L T +I+L + +Y+ ++ L M+ + D F
Sbjct: 520 KTMVEKGCAPNLFTF---NILLESLCRYRKLDEALGLLEEMKN-----KSVNPDAVTFGT 571
Query: 172 LLKAFCSQRQMKEARSVFGKM--VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
L+ FC + A ++F KM + S T + NI++ F E +VT E + EMV R
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
PD TY + +D +CK G G + L EM F+P++ T+ +I+ + +A
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ + + + LV + A+ T K +A L+ E + K+ + Y +F G
Sbjct: 692 AGIIHRMVQKGLVPE-----AVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELLFDG 746
Query: 350 L 350
L
Sbjct: 747 L 747
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 194/450 (43%), Gaps = 41/450 (9%)
Query: 64 RLFASHS----NGLKALEFFN----FT-LHHSQSPPSHVSFEMTLHILTRMRYFDKAWML 114
R F+S+ NGL L+F + FT + HS+ PS + F L ++ +M +D L
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 115 LQETA--RTHPSLITLKAM-------------SIMLSKIAKYQ------SFEDTLDGF-- 151
++ P L T + S L K+ K +F L+G+
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 152 -RRMEE-----DVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKS 202
R+E+ D +G F + + L++ C R + A +F +M + S P+ +
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
N L+ G E G +M+KR P+ +T+ ID + K G+ + L M
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
+ P + T +LI+G + +ARQ+F + + +Y LI +SK +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
+ + EM +K V + +TY + G + E++ +M+ R P RT +L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 383 KYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
C N +++ +L ++ Y+ ++ + ++I G+C G+V +AF+ + +G
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 443 MSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+ ++ + + G I + L + +K
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 150/325 (46%), Gaps = 13/325 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ V++ + L + R+ + A L + T + P+++T A+ L +I ++
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 148 LDGF--RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMN 204
L RR+E +V F L+ AF ++ EA+ ++ M+ PD +
Sbjct: 246 LRDMMKRRIEPNVIT--------FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYG 297
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ G G + ++ M + G P+ V Y I +CK R DG+++ EM ++
Sbjct: 298 SLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK 357
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
V T T LI G +V A+++FN++ SR D YN L+ L + +E A
Sbjct: 358 GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA 417
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L + + M ++ ++++ VTY + G+ + +E +L+ + + P T ++
Sbjct: 418 LMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISG 477
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPH 409
FC+ + + SL+ + E G+ P+
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGFLPN 502
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 152/349 (43%), Gaps = 10/349 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFED--T 147
P+ V++ + + + R D A L E T L S+ I + F D
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL----INGHCKFGDISA 455
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
+GF M E + E + L+ +CS+ ++ +A ++ +M + +P + L
Sbjct: 456 AEGF--MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L G +G + ++EM + P+ VTYN+ I+ YC++G L+EM +
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
VP + LIHG + A +A+ + + N ++ Y L+ R +E ALS
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ EM+++ V+LD V Y + G ++ + L ++M R P ++
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA-FECSK 434
+ + +W+ ++ +G P+ +I GLC G V+EA CSK
Sbjct: 694 KTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 9/294 (3%)
Query: 155 EEDVFV-GREFGTDEFNV-----LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILL 207
E VFV G G E N LL FC + +++EA SV +MV R D +L+
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G + D EM RG PD+V Y ID K G F + + + M V
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK-DIESALS 326
P T T +I+G +A L +++ + V + Y + L + + D++ A+
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
L + ++ K + + TY+ + G R IE SEL +M P T ++ C
Sbjct: 775 LHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ + ++ LWN + EKG P A + LI G C G++ +A E +ML +G
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 11/310 (3%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV--LLKAFCSQR 180
P ++T + L K+ Q FE G M+E + + F E V L++ +
Sbjct: 295 PDVVTYCTLVYGLCKV---QEFEI---GLEMMDEMLCL--RFSPSEAAVSSLVEGLRKRG 346
Query: 181 QMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
+++EA ++ ++V SP+ N L+ + EL + M K G P++VTY+
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I ID +C++G+ L L EM ++ +LI+G + A E+ ++
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
L Y +L+ I AL L EM K + T+ T+ GL R+ I
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+L+ +MA+ N P T ++++ +C+ + + + EKG P ++ LI G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 420 LCSRGQVHEA 429
LC GQ EA
Sbjct: 587 LCLTGQASEA 596
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 186/462 (40%), Gaps = 57/462 (12%)
Query: 73 LKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKA 130
+ A E F + + + P+ V++ + +KA L E PS+ T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF-- 510
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEE-DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+ +LS + + D + F M E +V R +NV+++ +C + M +A
Sbjct: 511 -TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV----TYNVMIEGYCEEGDMSKAFEFL 565
Query: 190 GKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
+M + PDT S L+ G +G + ++F + K + + Y + +C++
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF----NEIPSRNLVVD 304
G+ + L + +EM +R + LI G+ K R+LF E+ R L D
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS----LKHKDRKLFFGLLKEMHDRGLKPD 681
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
+Y ++I A ++ D + A + D MI + + VTY + GL ++ + L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 365 KMAQRNFVPQ-----------------------------------TRTVVMLMKYFCQNF 389
KM + VP T T ML++ FC+
Sbjct: 742 KMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG 801
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
R++ + L ++ G P +I LC R V +A E M E+G ++
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 450 MLERFLLQSGDIDKLKEL-DQMIKNLLSVLPPSKGHATGSSN 490
L +G++ K EL ++M++ ++P +K T +SN
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQ--GLIPNNKTSRTTTSN 901
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 161/388 (41%), Gaps = 55/388 (14%)
Query: 128 LKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARS 187
++ +S +L + K++ F ++ F M V VG + ++++ C + + A+
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDM---VSVGIRPDVYIYTGVIRSLCELKDLSRAKE 248
Query: 188 VFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
+ M + + N+L+ G + V ++ + PD VTY + C
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
K F GL +++EM +F P+ +++L+ G ++ GK + N + VVD G
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG---LRKRGKIEEALNLVKR---VVDFG 362
Query: 307 V------YNALITAL--------------------LRSKDI---------------ESAL 325
V YNALI +L LR D+ ++AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
S + EM++ ++L Y+++ G + I +M + P T LM +
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 386 CQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSA 445
C +++ +L L++ + KG P + L++GL G + +A + +M E +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 446 ASFLMLERFLLQSGDIDK----LKELDQ 469
++ ++ + GD+ K LKE+ +
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 157/406 (38%), Gaps = 19/406 (4%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA--WMLLQETARTHPS-------- 124
L FFNF H S SF + +H L + F A + PS
Sbjct: 87 GLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFS 146
Query: 125 ------LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
L + + +++ + + D + F+ M V + E T + LL
Sbjct: 147 CYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRT--LSALLHGLVK 204
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
R A +F MVS PD ++ E D++ + M G + V
Sbjct: 205 FRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVP 264
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
YN+ ID CKK + + + + +++ + P + T TL++G VQ ++ +E+
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML 324
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
++L+ L + IE AL+L+ +++ V + Y+ + L +
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFH 384
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLI 417
L+ +M + P T +L+ FC+ +LD +LS +V+ G + + LI
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 418 TGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
G C G + A +M+ + + ++ L G I+K
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 170/400 (42%), Gaps = 39/400 (9%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAM 131
+A+E+F + ++ P S+ L ++ R R FD +L E A PS+ T M
Sbjct: 80 RAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEM 139
Query: 132 SIMLSKIAKYQSFED------------------TLDG--------------FRRMEEDVF 159
+ K K + D TL G F++M+E
Sbjct: 140 VLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE--- 196
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTS 218
+G E F L++ F + ++ A S+ +M S D N+ + F + G V
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
F+HE+ G PD VTY I CK R + + + E +E+ + VP T+I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G G +A L ++ + YN ++T L + ++ AL + +EM +K
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAP 375
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ TY+ + L R+ ++ EL M + P RTV +++ C++ +LD + +++
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 399 NYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+ K P LI GL G+V +A++ ++ML+
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 169/372 (45%), Gaps = 32/372 (8%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAK----YQS 143
P+ + + + L + + D+A + +E P IT ++ L K+ + Y+
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKV 469
Query: 144 FEDTLDGFRRMEEDVFVG----------REFGTDEFNVLLKAFCS--------------- 178
+E LD R V+ +E G + ++ CS
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529
Query: 179 QRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ ++ R++F ++ +R F PD +S +IL+ G ++G ++ M ++G D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
YNI ID +CK G+ +LLEEM+ + F PT+ T ++I G + +A LF E
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
S+ + ++ +Y++LI + I+ A +++E+++K + + T++++ L+++ I
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLI 417
+Q M + P T +L+ C+ + + + W + ++G P + +I
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 418 TGLCSRGQVHEA 429
+GL G + EA
Sbjct: 770 SGLAKAGNIAEA 781
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 157/355 (44%), Gaps = 11/355 (3%)
Query: 88 SPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
+ P+ ++ + + +L R D A+ L +++ + ++ ++IM+ ++ K Q ++
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNI-- 205
F M+ V E F L+ ++ +A V+ KM+ D ++ +I
Sbjct: 432 CAMFEEMDYKVCTPDEI---TFCSLIDGLGKVGRVDDAYKVYEKMLD---SDCRTNSIVY 485
Query: 206 --LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
L+ F G Y +M+ + SPD N +D K G G + EE++
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
R+FVP + + LIHG A + +LF + + V+DT YN +I + +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A L++EM K E VTY ++ GL + ++ L+++ + L+
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
F + R+D + + L++KG P+ + + L+ L +++EA C + M E
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 154/368 (41%), Gaps = 9/368 (2%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMS 132
A +FF+ + + P V++ + +L + D+A + + E R P M
Sbjct: 257 AWKFFH-EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
+ K+ + + +E G +N +L ++ EA VF +M
Sbjct: 316 MGYGSAGKFD------EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 193 VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
+P+ + NIL+ +G + + M K G P+ T NI +D CK +
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ + EEM+ + P T +LI G G V A +++ ++ + ++ VY +LI
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
E + +MI + D +T + ++ E +++++ R FV
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P R+ +L+ + + + L+ + E+G A +++I G C G+V++A++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 433 SKQMLERG 440
++M +G
Sbjct: 610 LEEMKTKG 617
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
DT++ NI++ GF + G V EM +GF P VTY ID K R + L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
EE + ++ + ++LI G G V +A + E+ + L + +N+L+ AL+++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
++I AL M E + + VTY + GL + +Q+M ++ P T +
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISY 765
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
++ + + + +L++ G P + + +I GL + + +AF ++
Sbjct: 766 TTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 439 RG 440
RG
Sbjct: 826 RG 827
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 3/275 (1%)
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC-KKGRFGDGLRLLE 259
+S N LLL + +++ EM GF P +V I + C K + +G +++
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGP-SVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
M + KF P TTLI V ++ LF ++ ++ LI +
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
++SALSL+DEM ++ D V Y+ + ++ + + ++ P T
Sbjct: 218 RVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
++ C+ RLD ++ ++ +L + P +A + +I G S G+ EA+ ++ +
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 440 GRHMSAASFLMLERFLLQSGDIDK-LKELDQMIKN 473
G S ++ + L + G +D+ LK ++M K+
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 17/244 (6%)
Query: 94 SFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAK----YQSFEDT 147
++ + + + +KA+ LL+E T P+++T ++ L+KI + Y FE+
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
+R+E +V + ++ L+ F ++ EA + +++ + +P+ + N L
Sbjct: 649 KS--KRIELNVVI--------YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L ++ ++ + + M + +P+ VTY I I+ CK +F +EM+++
Sbjct: 699 LDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P+ + TT+I G N +A LF+ + V D+ YNA+I L A S
Sbjct: 759 KPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFS 818
Query: 327 LMDE 330
L +E
Sbjct: 819 LFEE 822
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/418 (18%), Positives = 162/418 (38%), Gaps = 80/418 (19%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
V + + + ++ D AW E P +T +M + + K ++ ++
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM---IGVLCKANRLDEAVEM 295
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLG 209
F +E++ V + +N ++ + S + EA S+ + ++ S P + N +L
Sbjct: 296 FEHLEKNRRVPCTYA---YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 352
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
++ G V + EM K+ +P+ TYNI ID C+ G+ L + M++ P
Sbjct: 353 LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPN 411
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
+ T+ N ++ L +S+ ++ A ++ +
Sbjct: 412 VRTV-----------------------------------NIMVDRLCKSQKLDEACAMFE 436
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF---- 385
EM K D +T+ ++ GL + ++ ++Y+KM + + L+K F
Sbjct: 437 EMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG 496
Query: 386 -------------CQNFRLDLSL------------------SLWNYLVEKGYCPHAHALD 414
QN DL L +++ + + + P A +
Sbjct: 497 RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 415 LLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+LI GL G +E +E M E+G + ++ ++ + G ++K +L + +K
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 173/388 (44%), Gaps = 51/388 (13%)
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+R PS++ S +LSKIAK ++++ + F ME G +N+++ C
Sbjct: 63 SRPLPSIVDF---SKVLSKIAKSKNYDLVISLFHHME---VCGIGHDLYSYNIVINCLCR 116
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ A SV GKM+ + PD +++ L+ GF + V +M + GF PD V
Sbjct: 117 CSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVI 176
Query: 238 YNIRIDTYCK-----------------------------------KGRFGDGLRLLEEME 262
YN ID CK GR+ D RL+ +M
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGK---ARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
R VP + T T +I + GK A +L+ E+ R + D YN+LI L
Sbjct: 237 MRDIVPNVITFTAVID---VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
++ A ++D M+ K D VTY+T+ G +S ++ ++L+++MAQR V T T
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+++ + Q R D + +++ + + P+ +L+ GLC +V +A + M +
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 440 GRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ ++ ++ + + G+++ +L
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDL 438
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 4/241 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F ++ F + + EA ++ +M R PD + N L+ G G V + MV
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G PD VTYN I+ +CK R +G +L EM +R V T T+I G
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A+++F+ + SR + Y+ L+ L + +E AL L + M + +ELD TY+ +
Sbjct: 367 AAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G+ + +E +L++ ++ + P + ++ FC+ + D S L+ + E G
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 408 P 408
P
Sbjct: 484 P 484
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 14/281 (4%)
Query: 159 FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVT 217
F GR F T S ++E +F KM+ SR P + +L +S +
Sbjct: 36 FWGRTFSTKR---------SSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYD 86
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
V +H M G D +YNI I+ C+ RF L ++ +M + + P + T+++LI
Sbjct: 87 LVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
+G A L +++ D +YN +I + + A+ L D M V
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D VTY+++ GL S + L + M R+ VP T ++ F + + ++ L
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+ + + P + LI GLC G+V EA KQML+
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA----KQMLD 303
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 15/272 (5%)
Query: 106 RYFDKAWMLLQETAR-THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRR--MEEDVFVGR 162
R+ D A ++ R P++IT A+ + K K+ + R ++ DVF
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT-- 281
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVEL 221
+N L+ C ++ EA+ + MV++ PD + N L+ GF +S V
Sbjct: 282 ------YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTK 335
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
+ EM +RG D +TYN I Y + GR + M+ R P I T + L++G
Sbjct: 336 LFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLC 392
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ KA LF + + +D YN +I + + ++E A L + K ++ D V
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
+Y TM G R + LY+KM + +P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 19/249 (7%)
Query: 193 VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR--IDTYCKKGR 250
+S S K +N+ LL + G+ V F R FS + N+ ID +CK
Sbjct: 7 ISIASKANKFLNLCLL---QKGNPVIVP-FISRFWGRTFSTKRSSMNLEEEIDLFCK--- 59
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
M + + +P+I + ++ +N LF+ + + D YN
Sbjct: 60 ----------MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
+I L R ALS++ +M++ E D VT ++ G + + +L KM +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
F P ++ C+ ++ ++ L++ + G A + L+ GLC G+ +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 431 ECSKQMLER 439
+ M+ R
Sbjct: 230 RLMRDMVMR 238
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 3/295 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGK-MVSRFSPDTKSMNILLLGFKESGD-VTSVELFYHEM 226
++ ++ +C +++A ++ + +V+ P+ L+ GF ++ + VT+ LF H M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH-M 330
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
VK G P+ YN I +CK G + + LL EME P + T T LI+G I
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A +LF ++ + + + YN+LI + ++E AL L EM VE + +T+ T+
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
G I+ LY +M + VP T L+ + + +L L++ ++E G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
P+ H L+ G G++ A + ++ ++ + F L L Q+G I
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 1/262 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F L+ FC R++ ARS+F MV P+ N L+ G +SG++ EM
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
SPD TY I I+ C + + + RL ++M+ + P+ T +LIHG N
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A L +E+ + + + ++ LI +DI++A+ L EM K + D VTY +
Sbjct: 427 QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI 486
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ ++ LY M + P T L+ F + RL +++ + ++ C
Sbjct: 487 DAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC 546
Query: 408 PHAHALDLLITGLCSRGQVHEA 429
+ LI GLC G + A
Sbjct: 547 WNHVGFTCLIEGLCQNGYILRA 568
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+ I +L + E + M K G P+ TY+ ID YCK G L
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+E+ + +P + TL+ G + AR LF + + + VYN LI +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
S ++ A+ L+ EM + D TY + GL + + L+QKM P + T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
L+ +C+ + ++ +L L + + G P+ LI G C+ + A +M
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 438 ERG 440
+G
Sbjct: 472 IKG 474
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 110/256 (42%), Gaps = 6/256 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L+ C + Q+ EA +F KM + R P + + N L+ G+ + ++ EM
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G P+ +T++ ID YC + L EM + VP + T T LI N
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A +L++++ + + + L+ + + A+ E ++R + V + +
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL ++ I S + M P + V ++K Q R+ ++ L +++ G
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 408 PHAHALDLLITGLCSR 423
P +LL+ L +R
Sbjct: 617 P-----NLLVNQLLAR 627
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 37/267 (13%)
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELF 222
+F F++L+ F +EA V +M + SPD+K+ +L G SV +
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEALWVSREM--KCSPDSKACLSILNGLVRRRRFDSVWVD 186
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
Y M+ RG PD Y + K+G + +LL+EM P +
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVY----------- 235
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+Y I L R +E A + + M + V + T
Sbjct: 236 ------------------------IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y M G ++ + LY+++ +P L+ FC+ L + SL+ ++V
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEA 429
+ G P+ + + LI G C G + EA
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEA 358
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 157/347 (45%), Gaps = 14/347 (4%)
Query: 132 SIMLSKIAKYQSFEDTLDGF----RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARS 187
+I+L+ + + F+ + F + + DV++ F + AFC +++EA
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL--------FTTAINAFCKGGKVEEAVK 281
Query: 188 VFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
+F KM + +P+ + N ++ G G +F +MV+RG P +TY+I +
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
+ R GD +L+EM ++ F P + LI + KA ++ + + S+ L + +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
YN LI ++ ++A L+ EM+ ++ ++ ++ L + +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
RN P + L+ C++ + +L LW + KG+ + L+ GLC G++
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQMIK 472
EAF K++L RG M S+ L +D+ LD+M+K
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 174/403 (43%), Gaps = 10/403 (2%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAM 131
+A++ F+ + + P+ V+F + L +D+A+M ++ P+LIT
Sbjct: 278 EAVKLFS-KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY--- 333
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
SI++ + + + D + M + F +N L+ +F + +A +
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI---VYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
MVS+ S + + N L+ G+ ++G + E EM+ GF+ + ++ I C
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
F LR + EM R P +TTLI G KA +L+ + ++ VVDT NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
L+ L + ++ A + E++ + +D V+Y+T+ G ++ +M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
P T +L+ +++ ++ W+ G P + ++I G C + E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKN 473
E +M+ + + + L R +SG + EL + +K+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 153/371 (41%), Gaps = 21/371 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMS---IMLSKIAKYQSF 144
P+ +++ + + LTR + A+ +L+E + P++I + I + K
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
+D + V G + +N L+K +C Q A + +M+S F+ + S
Sbjct: 388 KDLM---------VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
++ S F EM+ R SP I CK G+ L L +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLF---NEIPSRNLVVDTGVYNALITALLRSKD 320
+ FV T L+HG + AGK + F EI R V+D YN LI+ K
Sbjct: 499 KGFVVDTRTSNALLHG---LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
++ A +DEM+++ ++ D TY + GL +E + + + +P T +
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
++ C+ R + ++ ++ K P+ + LI C G++ A E + M +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 441 RHMSAASFLML 451
++A++ L
Sbjct: 676 ISPNSATYTSL 686
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 148 LDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
LD R+++++ +GR D +N L+ C ++++ EA +MV R PD + +
Sbjct: 521 LDEAFRIQKEI-LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 205 ILLLGF----------------KESG---DVTSVEL----------------FYHEMVKR 229
IL+ G K +G DV + + F+ EM+ +
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
P+ V YN I YC+ GR L L E+M+ + P T T+LI G I+ +A
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ LF E+ L + Y ALI + + L+ EM K V + +TY M G
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRT 377
R + S L +M ++ VP + T
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 1/304 (0%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFY 223
G L+ C + +A ++ + +++ F DT++ N LL G E+G +
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
E++ RG D V+YN I C K + + L+EM +R P T + LI G +
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
+A Q +++ ++ D Y+ +I +++ E DEM+ K V+ + V Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ + RS + EL + M + P + T L+K R++ + L+ +
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+G P+ LI G GQ+ + ++M + H + ++ ++ + G++ +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 464 LKEL 467
L
Sbjct: 769 ASRL 772
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 157/347 (45%), Gaps = 14/347 (4%)
Query: 132 SIMLSKIAKYQSFEDTLDGF----RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARS 187
+I+L+ + + F+ + F + + DV++ F + AFC +++EA
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYL--------FTTAINAFCKGGKVEEAVK 281
Query: 188 VFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
+F KM + +P+ + N ++ G G +F +MV+RG P +TY+I +
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLT 341
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
+ R GD +L+EM ++ F P + LI + KA ++ + + S+ L + +
Sbjct: 342 RAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSS 401
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
YN LI ++ ++A L+ EM+ ++ ++ ++ L + +M
Sbjct: 402 TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEM 461
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
RN P + L+ C++ + +L LW + KG+ + L+ GLC G++
Sbjct: 462 LLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQMIK 472
EAF K++L RG M S+ L +D+ LD+M+K
Sbjct: 522 DEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 174/403 (43%), Gaps = 10/403 (2%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAM 131
+A++ F+ + + P+ V+F + L +D+A+M ++ P+LIT
Sbjct: 278 EAVKLFS-KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY--- 333
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
SI++ + + + D + M + F +N L+ +F + +A +
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI---VYNNLIDSFIEAGSLNKAIEIKDL 390
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
MVS+ S + + N L+ G+ ++G + E EM+ GF+ + ++ I C
Sbjct: 391 MVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM 450
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
F LR + EM R P +TTLI G KA +L+ + ++ VVDT NA
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
L+ L + ++ A + E++ + +D V+Y+T+ G ++ +M +R
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
P T +L+ +++ ++ W+ G P + ++I G C + E
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKN 473
E +M+ + + + L R +SG + EL + +K+
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 153/371 (41%), Gaps = 21/371 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMS---IMLSKIAKYQSF 144
P+ +++ + + LTR + A+ +L+E + P++I + I + K
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
+D + V G + +N L+K +C Q A + +M+S F+ + S
Sbjct: 388 KDLM---------VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
++ S F EM+ R SP I CK G+ L L +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLF---NEIPSRNLVVDTGVYNALITALLRSKD 320
+ FV T L+HG + AGK + F EI R V+D YN LI+ K
Sbjct: 499 KGFVVDTRTSNALLHG---LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
++ A +DEM+++ ++ D TY + GL +E + + + +P T +
Sbjct: 556 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 615
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
++ C+ R + ++ ++ K P+ + LI C G++ A E + M +G
Sbjct: 616 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 675
Query: 441 RHMSAASFLML 451
++A++ L
Sbjct: 676 ISPNSATYTSL 686
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 148 LDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
LD R+++++ +GR D +N L+ C ++++ EA +MV R PD + +
Sbjct: 521 LDEAFRIQKEI-LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 579
Query: 205 ILLLGF----------------KESG---DVTSVEL----------------FYHEMVKR 229
IL+ G K +G DV + + F+ EM+ +
Sbjct: 580 ILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
P+ V YN I YC+ GR L L E+M+ + P T T+LI G I+ +A
Sbjct: 640 NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEA 699
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ LF E+ L + Y ALI + + L+ EM K V + +TY M G
Sbjct: 700 KLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRT 377
R + S L +M ++ VP + T
Sbjct: 760 YARDGNVTEASRLLNEMREKGIVPDSIT 787
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 131/304 (43%), Gaps = 1/304 (0%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFY 223
G L+ C + +A ++ + +++ F DT++ N LL G E+G +
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
E++ RG D V+YN I C K + + L+EM +R P T + LI G +
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
+A Q +++ ++ D Y+ +I +++ E DEM+ K V+ + V Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ + RS + EL + M + P + T L+K R++ + L+ +
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+G P+ LI G GQ+ + ++M + H + ++ ++ + G++ +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 464 LKEL 467
L
Sbjct: 769 ASRL 772
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 127/261 (48%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
FN L F + + E G M+ SP+ + + + F +SG++ +H M +
Sbjct: 132 FNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKR 191
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
SP+ VT+ ID YCK G + L +EM R + + T T LI G +
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A ++++ + + ++ VY +I + D ++A+ + +M+ + + LD Y +
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL + ++ +E+ + M + + VP +M + ++ R+ ++++++ L+E+G+ P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 409 HAHALDLLITGLCSRGQVHEA 429
AL +I G+ GQ+HEA
Sbjct: 372 DVVALSTMIDGIAKNGQLHEA 392
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 6/300 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ FC + +M+ A ++ +MV R P++ ++ GF + GD + F +M+
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G D Y + I C G+ + ++E+ME+ VP + TT+++
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A +++++ R D + +I + ++ + A+ IEK + V Y +
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA---NDVMYTVLI 410
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
L + V L+ K+++ VP + C+ L + L +V++G
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
A LI GL S+G + EA + +ML G +A F +L R + G++ +L
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 128/290 (44%), Gaps = 14/290 (4%)
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
+VSR ++P S N ++ + G V E H M + G PD ++YN ID +C+ G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 251 FGDGLRLLEEME-RRKFV--PTIETITTLIHGAGIVQNAGKA---RQLFNEIPSRNLVVD 304
+LE + F+ P I + +L +G ++ + + + S N+V
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVT- 165
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
Y+ I +S +++ AL M + + VT+ + G ++ +E LY+
Sbjct: 166 ---YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
+M + T L+ FC+ + + +++ +VE P++ +I G RG
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRG 282
Query: 425 QVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNL 474
A + +ML +G + ++ ++ L +G KLKE ++++++
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG---KLKEATEIVEDM 329
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 90/243 (37%), Gaps = 31/243 (12%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSV 219
G + V++ C ++KEA + M S PD ++ + +SG + +
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 220 ELFYHEMVKRGFSPD------------------------------NVTYNIRIDTYCKKG 249
YH++++RGF PD +V Y + ID CK+G
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
F + RL ++ VP T+ I G N A +L + L++D Y
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
LI L + A + DEM+ + D + + + + S+L M +R
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Query: 370 NFV 372
V
Sbjct: 538 GLV 540
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 17/260 (6%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG-- 279
F +V RG++P ++N + CK G+ ++ M R P + + +LI G
Sbjct: 43 FLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHC 102
Query: 280 -------AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
A +V + +A F P D +N+L + K ++ M M+
Sbjct: 103 RNGDIRSASLVLESLRASHGFICKP------DIVSFNSLFNGFSKMKMLDEVFVYMGVML 156
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
K + VTY T +S ++ + + M + P T L+ +C+ L+
Sbjct: 157 -KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLE 215
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
+++SL+ + + LI G C +G++ A E +M+E ++ + +
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII 275
Query: 453 RFLLQSGDIDK-LKELDQMI 471
Q GD D +K L +M+
Sbjct: 276 DGFFQRGDSDNAMKFLAKML 295
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 173/396 (43%), Gaps = 47/396 (11%)
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+R PS+I S +LS IAK F+ + +ME +G +N+L+ FC
Sbjct: 72 SRPFPSIIEF---SKLLSAIAKMNKFDLVISFGEKME---ILGISHNLYTYNILINCFCR 125
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTS--------VE--------- 220
++ A ++ GKM+ + PD ++N LL GF ++ VE
Sbjct: 126 CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 221 -------LFYHE-----------MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
LF H MV+RG PD VTY ++ CK+G L LL +ME
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKME 245
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
K + +T+I ++ A LF E+ ++ + + Y++LI+ L
Sbjct: 246 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
A L+ +MIE+++ + VT+ + ++ + +LY++M +R+ P T L+
Sbjct: 306 DASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLI 365
Query: 383 KYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
FC RL + + ++ K P+ + LI G C +V + E ++M +RG
Sbjct: 366 NGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Query: 443 MSAASFLMLERFLLQSGDIDKLKELDQMI-KNLLSV 477
+ ++ L Q+ D D QM+ K ++SV
Sbjct: 426 GNTVTYTTLIHGFFQARDCDNA----QMVFKQMVSV 457
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 159/339 (46%), Gaps = 9/339 (2%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDT 147
P V+F +H L +A L+ + P L+T A+ ++ + K +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV---VNGLCKRGDTDLA 237
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L+ +ME E ++ ++ + C R +A ++F +M ++ P+ + + L
Sbjct: 238 LNLLNKMEAAKI---EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ G + +M++R +P+ VT++ ID + KKG+ +L EEM +R
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P I T ++LI+G ++ G+A+Q+ + ++ + + YN LI ++K ++ +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
L EM ++ + + VTY T+ G ++ + ++++M P T +L+ C
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
+N +L ++ ++ YL P + +++I G+C G+
Sbjct: 475 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
+ EM +G P+ +TY+ I C GR+ D RLL +M RK P + T + LI
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFV 334
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
KA +L+ E+ R++ + Y++LI + A +++ MI K + V
Sbjct: 335 KKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVV 394
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY+T+ G ++ ++ EL+++M+QR V T T L+ F Q D + ++ +
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEA 429
V G P+ ++L+ GLC G++ +A
Sbjct: 455 VSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 141/342 (41%), Gaps = 41/342 (11%)
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
++ +L+ S ++ +A +FG M SR P + LL + V F +M
Sbjct: 45 DYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 227 VKRGFSPDNVTYNIRIDTYCK-----------------------------------KGRF 251
G S + TYNI I+ +C+ R
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
D + L+++M + P T TTLIHG + A +A L + + R D Y A+
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
+ L + D + AL+L+++M ++E + V Y T+ L + + L+ +M +
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P T L+ C R + L + ++E+ P+ LI +G++ +A +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 432 CSKQMLERGRHMSAASF-LMLERFLLQSGDIDKLKELDQMIK 472
++M++R + ++ ++ F + +D+L E QM++
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCM----LDRLGEAKQMLE 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 7/133 (5%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P+++T + ++ K + + ++ FR M + VG T + L+ F R
Sbjct: 391 PNVVTYNTL---INGFCKAKRVDKGMELFREMSQRGLVGN---TVTYTTLIHGFFQARDC 444
Query: 183 KEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
A+ VF +MVS P+ + NILL G ++G + + + + + PD TYNI
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 242 IDTYCKKGRFGDG 254
I+ CK G++ G
Sbjct: 505 IEGMCKAGKWKMG 517
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 5/311 (1%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
SI++ K + ++ D +M F E +N ++ C Q +A+ +
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEV---IYNTIINGLCKVGQTSKAKEMLQN 579
Query: 192 MVS--RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
++ R+S S N ++ GF + GD S Y EM + G SP+ VT+ I+ +CK
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
R L + EM+ + + LI G + A LF+E+P L+ + VYN
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
+LI+ +++A+ L +M+ + D TY TM GL++ I S+LY ++
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
VP ++L+ + + + + + +K P+ +I G G ++EA
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Query: 430 FECSKQMLERG 440
F +MLE+G
Sbjct: 820 FRLHDEMLEKG 830
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 175/399 (43%), Gaps = 14/399 (3%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA--WMLLQETARTHPSLITLKAM 131
KAL+ FN + P V F + + + +KA + + ++ R PS + + M
Sbjct: 363 KALDLFN-RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+ K +S E L+ F E ++ F ++ +L FC Q ++ A S F K
Sbjct: 422 ---IQGCLKAESPEAALEIFNDSFES-WIAHGFMCNKIFLL---FCKQGKVDAATS-FLK 473
Query: 192 MVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
M+ + P+ N ++L ++ + EM+++G P+N TY+I ID + K
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF-NEIPSRNLVVDTGVY 308
+ ++ +M F T+I+G V KA+++ N I + + Y
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N++I ++ D +SA+ EM E + VT+ ++ G +S ++ E+ +M
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
L+ FC+ + + +L++ L E G P+ + LI+G + G++
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 429 AFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
A + K+M+ G ++ + LL+ G+I+ +L
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/429 (20%), Positives = 181/429 (42%), Gaps = 49/429 (11%)
Query: 54 STSLVEN------VLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHIL-TRMR 106
STS EN V+ L ++ + AL++ N+ + F + +HIL + +
Sbjct: 69 STSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIH 128
Query: 107 YFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
D+A LL +P+LI ++M++ + +D +R G E
Sbjct: 129 THDRASNLLVMFVSNNPTLIP----NVMVNNL---------VDSSKRF------GFELTP 169
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHE 225
FN LL A+ ++M A FG MV R P +N +L S + + Y++
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
MV G + DNVT + + ++ + + +++ + R P + + A +
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 286 AGKARQLFNEIPSR-NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
A L E+ + + Y ++I A ++ ++E A+ +MDEM+ + + +
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
++ G + + +L+ +M + P +++++FC+N ++ ++ + +
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 405 GYCPHAHALDLLITGLCSRGQVHEA----------------FECSKQML---ERGRHMSA 445
P + + +I G C + + EA F C+K L ++G+ +A
Sbjct: 410 RIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 446 ASFL-MLER 453
SFL M+E+
Sbjct: 469 TSFLKMMEQ 477
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 154/378 (40%), Gaps = 42/378 (11%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
+LS + + ++ + + +M V +G +L++A +R+ +EA +F +++
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKM---VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVM 266
Query: 194 SRFS-PDTKSMNILLLGFKESGD-VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
SR + PD ++ + ++ D V +++L K G TY I + K+G
Sbjct: 267 SRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM 326
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+ +R+++EM ++ T+L++G GKA LFN + L D +++ +
Sbjct: 327 EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVM 386
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK------ 365
+ ++ ++E A+ M R+ V HTM G +++ E E++
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 366 ----------------------------MAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
M Q+ P +M C+ +DL+ S+
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQ 457
++ ++EKG P+ +LI G A++ QM + + + L +
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 458 SGDIDKLKELDQMIKNLL 475
G K KE M++NL+
Sbjct: 567 VGQTSKAKE---MLQNLI 581
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ F + +M A ++ KMV+ S D + ++ G + G++ Y E++
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD + + + ++ KKG+F ++LEEM+++ P + +T+I G N
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLN 817
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
+A +L +E+ + +V D V+N L++ + S +S
Sbjct: 818 EAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKIS 856
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 1/292 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+NVL+ C + ++ EA M S P+ + NI+L +G E +M+
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++GFSP VT+NI I+ C+KG G + +LE+M + P + L+HG +
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A + + SR D YN ++TAL + +E A+ +++++ K +TY+T+
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL ++ +L +M ++ P T T L+ + ++D ++ ++ G
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
P+A + ++ GLC Q A + M+ RG + S+ +L L G
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 140/303 (46%), Gaps = 3/303 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+NV++ +C ++ A SV +M SPD + N +L +SG + M++
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM--SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
R PD +TY I I+ C+ G ++LL+EM R P + T L++G +
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A + N++PS + +N ++ ++ + A L+ +M+ K VT++ +
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
L R + ++ +KM Q P + + L+ FC+ ++D ++ +V +G P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKEL 467
+ ++T LC G+V +A E Q+ +G ++ + L ++G K +K L
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 468 DQM 470
D+M
Sbjct: 473 DEM 475
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 165/395 (41%), Gaps = 17/395 (4%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAM 131
+ +F ++H P + + R+ KA +L+ E + P +IT
Sbjct: 120 EGFKFLENMVYHGNVP-DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY--- 175
Query: 132 SIMLSKIAKYQSFEDTLDGFRRME--EDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
++M+S K + L RM DV +N +L++ C ++K+A V
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVT--------YNTILRSLCDSGKLKQAMEVL 227
Query: 190 GKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
+M+ R PD + IL+ V EM RG +PD VTYN+ ++ CK+
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
GR + ++ L +M P + T ++ A +L ++ + +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N LI L R + A+ ++++M + + + ++Y+ + G + ++ E ++M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
R P T ++ C++ +++ ++ + N L KG P + +I GL G+ +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 429 AFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
A + +M + ++ L L + G +D+
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 11/320 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ + ++ + + D+A L + ++ P++IT + + ++ E
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 148 L-DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNI 205
L D R+ G FN+L+ C + + A + KM P++ S N
Sbjct: 332 LADMLRK-------GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
LL GF + + + MV RG PD VTYN + CK G+ D + +L ++ +
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P + T T+I G GKA +L +E+ +++L DT Y++L+ L R ++ A+
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
E + + VT++++ LGL +S + + M R P + +L++
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 386 CQNFRLDLSLSLWNYLVEKG 405
+L L N L KG
Sbjct: 565 AYEGMAKEALELLNELCNKG 584
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 6/245 (2%)
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
++ V F+ ++V N + + G +G + LE M VP I TTLI G
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+ KA ++ + V D YN +I+ ++ +I +ALS++D M V D VT
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y+T+ L S ++ E+ +M QR+ P T +L++ C++ + ++ L + +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG--- 459
++G P ++L+ G+C G++ EA + M G + + ++ R + +G
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 460 DIDKL 464
D +KL
Sbjct: 327 DAEKL 331
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 7/252 (2%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
F MV G PD + I +C+ G+ ++LE +E VP + T +I G
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG-- 181
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
AG+ + + ++ D YN ++ +L S ++ A+ ++D M+++ D +
Sbjct: 182 -YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY + R +G+ +L +M R P T +L+ C+ RLD ++ N +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG-- 459
G P+ ++++ +CS G+ +A + ML +G S +F +L FL + G
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360
Query: 460 --DIDKLKELDQ 469
ID L+++ Q
Sbjct: 361 GRAIDILEKMPQ 372
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 120/275 (43%), Gaps = 4/275 (1%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
PD L+ GF G + G PD +TYN+ I YCK G + L +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
L+ M V T TI + +G ++ +A ++ + + R+ D Y LI A R
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLK---QAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ A+ L+DEM ++ D VTY+ + G+ + ++ + M P T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
++++ C R + L ++ KG+ P ++LI LC +G + A + ++M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 438 ERGRHMSAASFLMLERFLLQSGDIDKLKE-LDQMI 471
+ G ++ S+ L + +D+ E L++M+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 137/299 (45%), Gaps = 14/299 (4%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAM 131
+A++F N + S P+ ++ + L + + A LL + R PS++T
Sbjct: 292 EAIKFLN-DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF--- 347
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+I+++ + + +D +M + G + + +N LL FC +++M A +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQH---GCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 192 MVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
MVSR PD + N +L + G V +++ +G SP +TYN ID K G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
G ++LL+EM + P T ++L+ G +A + F+E + + +N+
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL----MRSTGIEGVSELYQK 365
++ L +S+ + A+ + MI + + + +Y + GL M +E ++EL K
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 10/232 (4%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAM 131
+A++ H P S +S+ LH + + D+A L+ +P ++T
Sbjct: 362 RAIDILEKMPQHGCQPNS-LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY--- 417
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+ ML+ + K ED ++ ++ G +N ++ + +A + +
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSK---GCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 192 MVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M ++ PDT + + L+ G G V F+HE + G P+ VT+N + CK +
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ 534
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV 302
+ L M R P + T LI G A +A +L NE+ ++ L+
Sbjct: 535 TDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVEL 221
E G + ++ C + A ++ KM + N ++ + G +
Sbjct: 38 EEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQN 97
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
+ EM +G PD +TY+ ID++C+ GR+ D +LL +M R+ P + T + LI+
Sbjct: 98 LFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+A +++ ++ R + T YN++I + + A ++D M K D V
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
T+ T+ G ++ ++ E++ +M +R V T T L+ FCQ LD + L N +
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAF 430
+ G P+ ++ LCS+ ++ +AF
Sbjct: 278 ISSGVAPNYITFQSMLASLCSKKELRKAF 306
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 110/270 (40%), Gaps = 4/270 (1%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
PD + L+ G G V MV+ G P Y I+ CK G L L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
L +ME + +I + A+ LF E+ + + D Y+ +I + R
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
S A L+ +MIE+++ D VT+ + L++ + E+Y M +R P T T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
++ FC+ RL+ + + + + K P LI G C +V E +M
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 438 ERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
RG + ++ L Q GD+D ++L
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDL 273
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 4/295 (1%)
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
GF + + G + L+ A + + + V+ +M+ R P+ + N+++
Sbjct: 172 GFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVIN 231
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR---LLEEMERRK 265
++G + +M G SP+ V+YN ID YCK G G + +L+EM
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND 291
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P + T LI G N + ++F E+ +++ + YN+LI L I A+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
S+ D+M+ V+ + +TY+ + G ++ ++ +++ + + VP TR ML+ +
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 386 CQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
C+ ++D +L + +G P + LI GLC G + A + Q+ +G
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN+L+ F + + VF +M+ + P+ S N L+ G G ++ +MV
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G P+ +TYN I+ +CK + L + ++ + VPT LI +
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKID 418
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
L E+ +V D G YN LI L R+ +IE+A L D++ K + D VT+H +
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILM 477
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL-VEKGY 406
G R + L ++M++ P+ T ++MK +C+ L + ++ + E+
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ + ++L+ G +G++ +A +MLE+G
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 118 TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFC 177
+A P+LIT A+ ++ K ++ LD F ++ G T +N+L+ A+C
Sbjct: 359 SAGVQPNLITYNAL---INGFCKNDMLKEALDMFGSVKGQ---GAVPTTRMYNMLIDAYC 412
Query: 178 SQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNV 236
++ + ++ +M PD + N L+ G +G++ + + + ++ +G PD V
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLV 471
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEI 296
T++I ++ YC+KG LL+EM + P T ++ G N A + ++
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 297 -PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
R L ++ YN L+ + +E A L++EM+EK + + +TY +
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS--RFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+N+++K +C + +K A ++ +M R + S N+LL G+ + G + + +EM
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
+++G P+ +TY I + EEM + FVP IE
Sbjct: 568 LEKGLVPNRITYEI----------------VKEEMVDQGFVPDIE 596
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%)
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
+ G+ + + + EM ++G P+ +TYN ID++C GR+ D +LL M ++ P I
Sbjct: 22 KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 81
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T + LI+ + +A +++ E+ ++ T YN++I + ++ A ++D M
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
K D VT+ T+ G ++ ++ E++ +M +R V T T L+ FCQ L
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 201
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
D + L N ++ G P ++ GLCS+ ++ +AF
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N ++ +FC + +A + M+ + +PD + + L+ F + V+ E Y EM+
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ P +TYN ID +CK+ R D R+L+ M + P + T +TLI+G +
Sbjct: 108 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
++F E+ R +V +T Y LI + D+++A L++EMI V D +T+H M
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 348 LGL 350
GL
Sbjct: 228 AGL 230
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEM 226
F+ L+ AF +R++ EA ++ +M+ R+S P T + N ++ GF + V + M
Sbjct: 83 FSALINAFVKERKVSEAEEIYKEML-RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+G SPD VT++ I+ YCK R +G+ + EM RR V T TTLIHG V +
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 201
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
A+ L NE+ S + D ++ ++ L K++ A ++++++
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
N A+ LF E+ + + + YN +I + S A L+ MIEK++ D VT+
Sbjct: 25 NHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFS 84
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
+ ++ + E+Y++M + + P T T ++ FC+ R+D + + + + K
Sbjct: 85 ALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 144
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P LI G C +V E +M RG + ++ L Q GD+D
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 465 KE-LDQMI 471
++ L++MI
Sbjct: 205 QDLLNEMI 212
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Query: 87 QSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSF 144
Q P V+F ++ + R +A + +E R P+ IT +M K
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK------- 127
Query: 145 EDTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
+D +D +RM D + D F+ L+ +C +++ +F +M R +T
Sbjct: 128 QDRVDDAKRML-DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
+ L+ GF + GD+ + + +EM+ G +PD +T++ + C K +LE++
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 262 ERRK 265
++ +
Sbjct: 247 QKSE 250
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 26/385 (6%)
Query: 95 FEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM 154
F + + +L+ D W L+E S+ + +++S AK E ++ F RM
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSY-CFCVLISAYAKMGMAEKAVESFGRM 153
Query: 155 EE-----DVFVGREFGTDEFNVLLKAFCSQRQMKE------ARSVFGKMV-SRFSPDTKS 202
+E DVF +NV+L+ M+E A +V+ +M+ SP+ +
Sbjct: 154 KEFDCRPDVFT--------YNVILRVM-----MREEVFFMLAFAVYNEMLKCNCSPNLYT 200
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
IL+ G + G + + + +M RG SP+ VTY I I C++G D +L EM+
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
P L+ G + +A +L V+ Y++LI L R++
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
A L M++K ++ D + Y + GL ++ IE +L M + P T ++
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 383 KYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
K C L+ SL + E P A +LI +C G V EA E ++ + G
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 443 MSAASFLMLERFLLQSGDIDKLKEL 467
S A+F L L +SG++ + + L
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLL 465
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 23/317 (7%)
Query: 102 LTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L R R + +A+ L + + P +I +I++ ++K ED L M
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIIL---YTILIQGLSKAGKIEDALKLLSSMPSK-- 367
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTS 218
G T +N ++KA C + ++E RS+ +M S PD + IL+ +G V
Sbjct: 368 -GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTI-------- 270
E + E+ K G SP T+N ID CK G + LL +ME +
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 271 ETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDE 330
+ T++ I+ KA + D YN LI R+ DI+ AL L++
Sbjct: 487 RSFDTMVESGSIL----KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 331 MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFR 390
+ K + D VTY+T+ GL R E +L+ A+ +F LM + C+ +
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRK 600
Query: 391 LDLSLSLWNYLVEKGYC 407
+ ++ +LW ++K C
Sbjct: 601 VLVAFNLWMKYLKKISC 617
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 123/296 (41%), Gaps = 19/296 (6%)
Query: 149 DGFRRMEEDVFV-----GREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-----VSRFSP 198
+G R E++F G FN L+ C ++KEAR + KM S F
Sbjct: 421 NGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLR 480
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
+ S N ESG + G SPD V+YN+ I+ +C+ G L+LL
Sbjct: 481 LSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
++ + P T TLI+G V +A +LF + VY +L+T R
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRK 598
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTM---FLGLMRSTGIEGVSELYQKMAQRNFVPQT 375
+ + A +L + ++K LD T + + F + + EL + + P T
Sbjct: 599 RKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYT 658
Query: 376 RTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
++ L CQ+ R +L +++ L EK + LI GLC R Q+ A E
Sbjct: 659 IWLIGL----CQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIE 710
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 161/390 (41%), Gaps = 40/390 (10%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ ++ ++ L + D A + + E+ R P ++T M K + Q
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQK---A 276
Query: 148 LDGFRRME---------------EDVFVGREFGT--------DE---------FNVLLKA 175
++ R ME + + +FG+ DE F++++
Sbjct: 277 MEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGG 336
Query: 176 FCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
C + ++ E +VF M+ + S P+ +L+ G+ +SG V H M+ GF PD
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
VTY++ ++ CK GR + L ++LI G G +A +LF
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR-VELDGVTYHTMFLGLMRS 353
E+ + D+ YNALI A + + ++ A++L M E+ + TY + G+ +
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKE 516
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
E +L+ M + P L C + ++ + + + L G A
Sbjct: 517 HRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE 576
Query: 414 DLLITGLCSRGQVHEAFECSKQMLERGRHM 443
D++ T LC G++ EA + + + ERGR +
Sbjct: 577 DMINT-LCKAGRIKEACKLADGITERGREV 605
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 8/308 (2%)
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEF-------NVLLKAFCSQRQMKEARSVFGKMV 193
Y S D L + ++ FV E EF N L+K+F ++E V+ KM
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 194 SR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
P + N L+ G + V S E + M PD VTYN I YCK G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ L +ME R T T+I + G L+ E+ + + V ++ +I
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
L + + ++ + MI K + + Y + G +S +E L +M F
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P T +++ C+N R++ +L ++ G ++ LI GL G+V EA
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 433 SKQMLERG 440
++M E+G
Sbjct: 455 FEEMSEKG 462
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 146/357 (40%), Gaps = 19/357 (5%)
Query: 115 LQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM----EEDVFVGREFGTDEF- 169
+ + +++ +L+ +S +L+ + S E LDGF R FV +DE
Sbjct: 70 VSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIR 129
Query: 170 ---NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
++ FC R+ K+ VS +++L L + DV + E+
Sbjct: 130 EKPDIAWSFFCWSRKQKKYTHNLECYVSL-------VDVLAL----AKDVDRIRFVSSEI 178
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
K F N I ++ K G + L + +M+ PT+ T L++G
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
A ++F + S + D YN +I ++ + A+ + +M + E D +TY TM
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+ LYQ+M ++ +++ C+ +L+ +++ ++ KG
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
P+ +LI G G V +A +M++ G ++ ++ L ++G +++
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 172/401 (42%), Gaps = 23/401 (5%)
Query: 95 FEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDTLDGF- 151
F+ ++ L + R F+ AW L+ + R+ +L++ +++ + A+ + + F
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 152 --RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEA----RSVFGKMVSRFSPDTKSMNI 205
R E E E VLL A C + ++EA + G M S + P + NI
Sbjct: 198 FARSYEPVCKSATELRLLE--VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNI 255
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
LL G+ S + E + EM P VTY I+ YC+ R + +LEEM+ +
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG----VYNALITALLRSKDI 321
+I G G AG+ + + R V ++G YN+L+ ++ D+
Sbjct: 316 MEINFMVFNPIIDGLG---EAGRLSEALGMM-ERFFVCESGPTIVTYNSLVKNFCKAGDL 371
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A ++ M+ + V+ TY+ F + E LY K+ + P T ++
Sbjct: 372 PGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLI 431
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+K C++ +L L++ + + +G P +LI LC + EAFE + RG
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 442 HMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSK 482
+F M++ L G D K L +L+S LP SK
Sbjct: 492 IPQYITFKMIDNGLRSKGMSDMAKRL----SSLMSSLPHSK 528
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 171/408 (41%), Gaps = 52/408 (12%)
Query: 75 ALEFFNFTLH---HSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLK 129
+L N LH H PPS F++ L A + Q+ R P+L+T
Sbjct: 111 SLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCN 170
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+ I L + S + F M V +G FNVL+ +C + ++++A +
Sbjct: 171 TLLIGLVRYPSSFSISSAREVFDDM---VKIGVSLNVQTFNVLVNGYCLEGKLEDALGML 227
Query: 190 GKMVSRF--SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
+MVS F +PD + N +L + G ++ ++ +M K G P+ VTYN + YCK
Sbjct: 228 ERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR---QLFNEIPSRNLVVD 304
G + +++E M++ +P + T LI+G + NAG R +L + + S L D
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILING---LCNAGSMREGLELMDAMKSLKLQPD 344
Query: 305 TGVYNALITALLRSKDIESALSLMDEM-------------------------------IE 333
YN LI A LM++M ++
Sbjct: 345 VVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK 404
Query: 334 KRVELDG-----VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
+ V++ G VTYHT+ ++ + G E+ ++M Q+ T T+ ++ C+
Sbjct: 405 ELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+LD + +L N ++G+ LI G +V +A E +M
Sbjct: 465 RKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 16/310 (5%)
Query: 170 NVLLKAFCSQ-------RQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELF 222
N+ LK C + R++KE + G FSPD + + L+ + + GD++
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHG-----FSPDIVTYHTLIKAYLKVGDLSGALEM 438
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
EM ++G + +T N +D CK+ + + LL +R F+ T TLI G
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+ KA ++++E+ + +N+LI L E A+ DE+ E + D T
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
++++ LG + +E E Y + + +F P T +L+ C+ + +L+ +N L+
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLI 618
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
E+ + +I+ C ++ EA++ +M E+G ++ L++ G
Sbjct: 619 EEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDG--- 674
Query: 463 KLKELDQMIK 472
KL E D+++K
Sbjct: 675 KLSETDELLK 684
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 124/308 (40%), Gaps = 37/308 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESG------------- 214
+N+L+ C+ M+E + M S + PD + N L+ G E G
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 215 -DVTSVELFYH-------------EMVKR---------GFSPDNVTYNIRIDTYCKKGRF 251
D H E V R GFSPD VTY+ I Y K G
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
L ++ EM ++ T+ T++ + +A L N R +VD Y L
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I R + +E AL + DEM + ++ T++++ GL E E + ++A+
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
+P T ++ +C+ R++ + +N ++ + P + ++L+ GLC G +A
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 432 CSKQMLER 439
++E
Sbjct: 613 FFNTLIEE 620
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 162 REFGTDE--FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTS 218
R F DE + L+ F + ++++A ++ +M + +P + N L+ G G
Sbjct: 480 RGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTEL 539
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ E+ + G PD+ T+N I YCK+GR E + F P T L++
Sbjct: 540 AMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 279 GAGIVQNAGKARQLFNE-IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
G KA FN I R VDT YN +I+A + K ++ A L+ EM EK +E
Sbjct: 600 GLCKEGMTEKALNFFNTLIEERE--VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLE 657
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
D TY++ LM + EL +K + +
Sbjct: 658 PDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 150/338 (44%), Gaps = 44/338 (13%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L+K C ++ EA ++G+++ R P + + L+ GF + G++ S Y +M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 228 KRGFSPDNVTY-----------------------------------NIRIDTYCKKGRFG 252
K G+ PD V Y N ID +C+ RF
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA-------GKARQLFNEIPSRNLVVDT 305
+ L++ M P + T TT++ I+++A QLF+ + + D
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMR-VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
V N +I L + IE A + +IE ++E D VTY+TM G ++ +++
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 632
Query: 366 MAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
+ F P T T+ +L+ C+N +D ++ +++ + EKG P+A L+
Sbjct: 633 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 692
Query: 426 VHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+ +F+ ++M E+G S S+ ++ L + G +D+
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE 730
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%)
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G +P+ VT+ I+ +CK+G L + ME+R P + +TLI G G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+LF++ + + +D V+++ I ++S D+ +A + M+ + + + VTY + G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
L + I +Y ++ +R P T L+ FC+ L +L+ +++ GY P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
+L+ GL +G + A S +ML + ++ F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 36/272 (13%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+++ AFC + +F M ++ S D N+++ + + F++ +++
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
PD VTYN I YC R + R+ E ++ F P T+T LIH
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH---------- 650
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
L ++ D++ A+ + M EK + + VTY +
Sbjct: 651 -------------------------VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
+S IEG +L+++M ++ P + +++ C+ R+D + ++++ ++ P
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
A +LI G C G++ EA + ML G
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 135/336 (40%), Gaps = 42/336 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F+ + + + A V+ +M+ + SP+ + IL+ G + G + Y +++
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQ 284
KRG P VTY+ ID +CK G G L E+M + + P + L+ G G++
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 285 NAGK-ARQLFNEIPSRNLVVDT----------------------GVYN-----ALITALL 316
+A + + ++ + N+VV G+Y A T ++
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 317 RSKDIESA----------LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
R +E A L L D M ++ D + + L + IE S+ + +
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+ P T ++ +C RLD + ++ L + P+ L +LI LC +
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM 658
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
A M E+G +A ++ L + +S DI+
Sbjct: 659 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIE 694
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKS 202
F + ++G +ME D+ +N ++ +CS R++ EA +F + V+ F P+T +
Sbjct: 595 FNNLIEG--KMEPDIVT--------YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
+ IL+ ++ D+ + M ++G P+ VTY +D + K +L EEM+
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
+ P+I + + +I G +A +F++ L+ D Y LI + +
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 323 SALSLMDEMIEKRVELD 339
A L + M+ V+ D
Sbjct: 765 EAALLYEHMLRNGVKPD 781
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
+T + +++ F H L+ F+ + S V + +H+L + + A
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC-NVVIHLLFKCHRIEDASK 593
Query: 114 LLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFG--TDEF 169
+ P ++T M I Y S LD R+ E + V FG T
Sbjct: 594 FFNNLIEGKMEPDIVTYNTM------ICGYCSLR-RLDEAERIFELLKV-TPFGPNTVTL 645
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+L+ C M A +F M + S P+ + L+ F +S D+ + EM +
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+G SP V+Y+I ID CK+GR + + + K +P + LI G
Sbjct: 706 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 756
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 1/206 (0%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
NV++ ++++A F ++ + PD + N ++ G+ + E + +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
F P+ VT I I CK +R+ M + P T L+ +
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
+ +LF E+ + + Y+ +I L + ++ A ++ + I+ ++ D V Y +
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQ 374
G + + + LY+ M + P
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 184/430 (42%), Gaps = 18/430 (4%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
++T +V +L RL A FF + H +++ + IL+ +Y +K +
Sbjct: 123 LTTPVVCKILQRLQYEEKT---AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQF 179
Query: 113 M----LLQETARTHPSLITLKAMSIMLSKIAKY-QSFEDTLDGFRRMEEDVFVGREFGTD 167
+L R + +++ + ++L + KY + + + F + + + V + +
Sbjct: 180 RIVIDMLDYMKRNNKTVVLV---DVLLEILRKYCERYLTHVQKFAKRKR-IRVKTQPEIN 235
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN+LL A C +KE ++ +M R PD + N+L G+ D EM+
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMI 295
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK---FVPTIETITTLIHGAGIVQ 284
+ G P+N TY IDT+C+ G + L + M + PT +T +I
Sbjct: 296 EAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKND 355
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
A + +L + S + D Y +I + ++ ++ A +DEM K D VTY+
Sbjct: 356 KAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYN 415
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
L + + +LY +M + P +T ML+ F + D + + W + ++
Sbjct: 416 CFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKR 475
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
+I GL + EA ++++ +G + + + + FL++ ++ L
Sbjct: 476 DCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL---PYRVFDSFLMRLSEVGNL 532
Query: 465 KELDQMIKNL 474
K + ++ +++
Sbjct: 533 KAIHKVSEHM 542
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 129 KAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN--VLLKAFCSQRQMKEAR 186
K +++++ + K +D + FR M G+ D F+ VL+ F M++A
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMR-----GKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 187 SVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
S+F +MV +P+ N+LL GF SG++ + EM +G P+ VTY ID Y
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
CK G + RL +EM+ + VP TTL+ G + + +A +F + T
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASST 766
Query: 306 GVYNALITALLRSKDIESALS----LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+NALI + + E LMD ++ + + VTY+ M L + +E E
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
L+ +M N +P T L+ + + R +++ + G P ++I
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Query: 422 SRGQVHEAFECSKQMLER 439
G +A QM +
Sbjct: 887 KEGMTTKALVLVDQMFAK 904
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 19/330 (5%)
Query: 108 FDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEE-----DVFV 160
D A+ +++E + P+++ + ++ + F D + + M+E D+F
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIY---TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFC 489
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSV 219
+N L+ ++M EARS +MV P+ + + G+ E+ + S
Sbjct: 490 --------YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA 541
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+ + EM + G P+ V I+ YCKKG+ + M + + +T T L++G
Sbjct: 542 DKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
A ++F E+ + + D Y LI + +++ A S+ DEM+E+ + +
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
+ Y+ + G RS IE EL +M+ + P T ++ +C++ L + L++
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ KG P + L+ G C V A
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 154/362 (42%), Gaps = 16/362 (4%)
Query: 138 IAKYQSFEDTLDGFRRMEEDVFVGREFGTD-----------EFNVLLKAFCSQRQMKEAR 186
I + Q++ ++G+ R E++V G E + + ++K CS + A
Sbjct: 379 IPQAQAYASLIEGYCR-EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 187 SVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
++ +M+ S P+ L+ F ++ EM ++G +PD YN I
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
K R + L EM P T I G A + E+ ++ +
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+ LI + + A S M+++ + D TY + GL ++ ++ E++++
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 366 MAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
M + P + +L+ F + + + S+++ +VE+G P+ ++L+ G C G+
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 426 VHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI-DKLKELDQMIKNLLSVLPPSKGH 484
+ +A E +M +G H +A ++ + +SGD+ + + D+M L ++P S +
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM--KLKGLVPDSFVY 735
Query: 485 AT 486
T
Sbjct: 736 TT 737
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 18/337 (5%)
Query: 61 VLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR 120
VL F+ N KA F+ + +P + + + M L R +KA LL E +
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 121 T--HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
HP+ +T + I Y D + FR +E G + + L+ C
Sbjct: 691 KGLHPNAVTYCTI------IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 179 QRQMKEARSVFGKMVSRFSPDTKSMNILL-LGFKESGDVTSVELFYHEM---VKRGFSPD 234
++ A ++FG + T N L+ FK E+ M R P+
Sbjct: 745 LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
+VTYNI ID CK+G L +M+ +PT+ T T+L++G + + +F+
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV-----TYHTMFLG 349
E + + D +Y+ +I A L+ AL L+D+M K DG T + G
Sbjct: 865 EAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSG 924
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
+ +E ++ + M + ++P + TV+ L+ C
Sbjct: 925 FAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/335 (20%), Positives = 139/335 (41%), Gaps = 36/335 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
++VL+ C +++++A+S+ +M S S D + ++L+ G + + + + HEMV
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G + Y+ I K+G L + M +P + +LI G +N
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ +L E+ RN+V+ Y ++ + S D++ A +++ EMI + V Y T+
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
++++ + ++M ++ P L+ + R+D + S +VE G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 408 PHAHALDLLITG-----------------------------------LCSRGQVHEAFEC 432
P+A I+G C +G+V EA
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 433 SKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ M+++G A ++ +L L ++ +D +E+
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 144/365 (39%), Gaps = 24/365 (6%)
Query: 129 KAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSV 188
KA+S++ I + + R ++ FVG+ F +L + ++ ++EA V
Sbjct: 115 KALSVVERMIERNWPVAEVWSSIVRCSQE-FVGKSDDGVLFGILFDGYIAKGYIEEAVFV 173
Query: 189 FGK-MVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
F M P +LL + Y MV+R D TY++ I +C+
Sbjct: 174 FSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCR 233
Query: 248 KGRFGDG---------------------LRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
G G L+L E M + VP T LI G ++
Sbjct: 234 AGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRL 293
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
A+ L E+ S + +D Y+ LI LL+ ++ ++A L+ EM+ + + Y
Sbjct: 294 EDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCC 353
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+ + +E L+ M +PQ + L++ +C+ + L + ++
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI-DKLK 465
+ ++ G+CS G + A+ K+M+ G + + L + LQ+ D ++
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 466 ELDQM 470
L +M
Sbjct: 474 VLKEM 478
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 130/314 (41%), Gaps = 18/314 (5%)
Query: 128 LKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARS 187
L ++L + ++ + D ++ M E V F +++L+ A C ++ +
Sbjct: 186 LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV---FDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 188 VFGKMVSRFSPDTKSMNI-LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
V K F T ++N+ L KES M+ +G P TY++ ID C
Sbjct: 243 VLFKTEKEFR--TATLNVDGALKLKES------------MICKGLVPLKYTYDVLIDGLC 288
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
K R D LL EM+ T + LI G +NA A+ L +E+ S + +
Sbjct: 289 KIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPY 348
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
+Y+ I + + +E A +L D MI + Y ++ G R + EL +M
Sbjct: 349 MYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEM 408
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+RN V T ++K C + LD + ++ ++ G P+ LI +
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 427 HEAFECSKQMLERG 440
+A K+M E+G
Sbjct: 469 GDAMRVLKEMKEQG 482
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 167/384 (43%), Gaps = 8/384 (2%)
Query: 57 LVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQ 116
L E ++ S S L ++ +FN + + P S+ F L + F++ W
Sbjct: 96 LYEVIINSYVQSQSLNL-SISYFNEMVDNGFVPGSNC-FNYLLTFVVGSSSFNQWWSFFN 153
Query: 117 ETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAF 176
E ++ + + I++ + E + D + E G + L+
Sbjct: 154 ENKS--KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE---FGFSPNVVIYTTLIDGC 208
Query: 177 CSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
C + ++++A+ +F +M + ++ +L+ G ++G Y +M + G P+
Sbjct: 209 CKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNL 268
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
TYN ++ CK GR D ++ +EM R I T TLI G +A ++ ++
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ 328
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ S + + YN LI + ALSL ++ + + VTY+ + G R
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
G +++ ++M +R P T +L+ F ++ ++ ++ L + E G P H +
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 416 LITGLCSRGQVHEAFECSKQMLER 439
LI G C +GQ++EA K M+E+
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEK 472
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+ + N ++ + G + EM +RG S + VTYN I C++ + + ++
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+++M+ P + T TLI G V GKA L ++ SR L YN L++ R
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
D A ++ EM E+ ++ VTY + RS +E +L M + VP T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+ FC +++ + L+ +VEK P+ + +I G C G + A + K+M
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 438 ERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLL-SVLPPS 481
E+ + AS+ + L + K KE +++++ ++ S + PS
Sbjct: 506 EKELAPNVASYRYMIEVLCKE---RKSKEAERLVEKMIDSGIDPS 547
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 126/295 (42%), Gaps = 7/295 (2%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P+L T + L K + T D F+ +E G +N L+ C + ++
Sbjct: 266 PNLYTYNCVMNQLCKDGR------TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
EA V +M S +P+ + N L+ GF G + ++ RG SP VTYNI
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
+ +C+KG ++++EME R P+ T T LI N KA QL + L
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
V D Y+ LI + A L M+EK E + V Y+TM LG + +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLL 416
L ++M ++ P + +++ C+ + + L +++ G P L L+
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 141/349 (40%), Gaps = 42/349 (12%)
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
LL + S + ++++ + QS ++ F M ++ FV G++ FN LL
Sbjct: 80 LLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVP---GSNCFNYLL 136
Query: 174 KAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
+ S F + S+ D S IL+ G E+G++ E+ + GFSP
Sbjct: 137 TFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP 196
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR--Q 291
+ V Y ID CKKG L EM + V T T LI+G + +N K + +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING--LFKNGVKKQGFE 254
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ ++ + + YN ++ L + + A + DEM E+ V + VTY+T+ GL
Sbjct: 255 MYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL- 313
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
C+ +L+ + + + + G P+
Sbjct: 314 ----------------------------------CREMKLNEANKVVDQMKSDGINPNLI 339
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+ LI G C G++ +A + + RG S ++ +L + GD
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGD 388
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
PSL+T +I++S + + MEE G + + +L+ F M
Sbjct: 371 PSLVTY---NILVSGFCRKGDTSGAAKMVKEMEER---GIKPSKVTYTILIDTFARSDNM 424
Query: 183 KEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
++A + M PD + ++L+ GF G + + MV++ P+ V YN
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
I YCK+G L+LL+EME ++ P + + +I + + +A +L ++
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM----- 539
Query: 302 VVDTGV--YNALITALLRSKD 320
+D+G+ ++++ + R+K+
Sbjct: 540 -IDSGIDPSTSILSLISRAKN 559
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 153/357 (42%), Gaps = 5/357 (1%)
Query: 108 FDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD 167
F+ A L + A +HP L ++ S +L IAK +E + FR +E +G
Sbjct: 60 FNDALTLFCDMAESHP-LPSIVDFSRLLIAIAKLNKYEAVISLFRHLE---MLGISHDLY 115
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
F L+ FC ++ A S GKM+ F P + L+ GF ++
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
V G+ P+ V YN ID+ C+KG+ L +L+ M++ P + T +LI
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
G + ++ +++ + D ++ALI + + A +EMI++ V + VTY+++
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
GL ++ ++ + + F P T L+ +C+ R+D + + + G
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+ L G C G+ A + +M+ G H +F +L L G I K
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
PS++T ++ + ++ +D + V +G E +N ++ + C + Q+
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVD------QIVGLGYEPNVVIYNTIIDSLCEKGQV 200
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
A V M PD + N L+ SG +M++ G SPD +T++
Sbjct: 201 NTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
ID Y K+G+ + + EM +R P I T +LI+G I +A+++ N + S+
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+ YN LI ++K ++ + ++ M V+ D TY+T++ G ++ +
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
+ +M P T +L+ C + ++ +L L + +++I GLC
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 422 SRGQVHEAF 430
+V +A+
Sbjct: 441 KADKVEDAW 449
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 88/203 (43%), Gaps = 1/203 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ C + EA+ V +VS+ F P+ + N L+ G+ ++ V M
Sbjct: 292 YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMS 351
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G D TYN YC+ G+F ++L M P + T L+ G G
Sbjct: 352 RDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIG 411
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
KA ++ VV YN +I L ++ +E A L + K V D +TY TM
Sbjct: 412 KALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
Query: 348 LGLMRSTGIEGVSELYQKMAQRN 370
+GL R ELY+KM + +
Sbjct: 472 IGLRRKRLWREAHELYRKMQKED 494
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F+ L+ + + Q+ EA+ + +M+ R +P+ + N L+ G G + + + +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+GF P+ VTYN I+ YCK R DG+++L M R T TL G
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A ++ + S + D +N L+ L I AL ++++ + + + +TY+ +
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
GL ++ +E L+ +A + P T + +M
Sbjct: 437 KGLCKADKVEDAWYLFCSLALKGVSPDVITYITMM 471
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 158/356 (44%), Gaps = 19/356 (5%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE---TARTHPSLITLKAM 131
A+E +N + SP + + + L R D A+ ++ E +AR S + A+
Sbjct: 168 AVEIWNAMIRSGVSPDNKACAALVVG-LCHARKVDLAYEMVAEEIKSARVKLSTVVYNAL 226
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
K + + E + +G E +NVLL + +K A V +
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSK------IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 192 MV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK----RGFSPDNVTYNIRIDTYC 246
MV S D S N LL K V+ + Y+ MVK RGF D V+Y+ I+T+C
Sbjct: 281 MVRSGIQLDAYSYNQLL---KRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFC 336
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
+ RL EEM ++ V + T T+LI N+ A++L +++ L D
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRI 396
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
Y ++ L +S +++ A + ++MIE + D ++Y+++ GL RS + +L++ M
Sbjct: 397 FYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCS 422
+ P T ++ + +L + +W+ +++KG+ D LI CS
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCS 512
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ FC ++++A ++ M PD + N+LL + ++ + E EMV
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLR-LLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+ G D +YN + +C+ +++EME R F + + +TLI N
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVV-SYSTLIETFCRASNT 341
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
KA +LF E+ + +V++ Y +LI A LR + A L+D+M E + D + Y T+
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
L +S ++ ++ M + P + L+ C++ R+ ++ L+ + K
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
CP +I GL ++ A++ QM+++G
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 160/425 (37%), Gaps = 44/425 (10%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A++ F+ + HS + + +L R F+ A + + SLI S
Sbjct: 28 AVQVFD-EMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF-TYSRF 85
Query: 135 LSKIAKYQSFEDTLDGF-RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
+S + K + F D +D ME F+ + FNV L C + ++ A F MV
Sbjct: 86 ISGLCKVKKF-DLIDALLSDMETLGFIPDIWA---FNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 194 SRF-SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN----------------- 235
R PD S IL+ G +G VT ++ M++ G SPDN
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 236 -------------------VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTL 276
V YN I +CK GR L M + P + T L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRV 336
++ +A + E+ + +D YN L+ R + + M + +E R
Sbjct: 262 LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG 321
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
D V+Y T+ R++ L+++M Q+ V T L+K F + ++
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLL 456
L + + E G P ++ LC G V +A+ M+E A S+ L L
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 457 QSGDI 461
+SG +
Sbjct: 442 RSGRV 446
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 89/219 (40%), Gaps = 1/219 (0%)
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
+SG + + + EM + + YN I ++ RF + +M+ F
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T + I G V+ L +++ + + D +N + L R + A+ M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
+++ E D V+Y + GL R+ + E++ M + P + L+ C ++
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 392 DLSLSLWNYLVEKGYCPHAHAL-DLLITGLCSRGQVHEA 429
DL+ + ++ + + + LI+G C G++ +A
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 3/180 (1%)
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y + I L++S I++A+ + DEM + Y+ L+R + E +Y M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
F T + C+ + DL +L + + G+ P A ++ + LC +V
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDI-DKLKELDQMIKNLLSVLPPSKGHAT 486
A + M++RGR S+ +L L ++G + D ++ + MI++ +S P +K A
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVS--PDNKACAA 189
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+G++ NA Q+F+E+ + V + YN I L+R E A ++ +M L
Sbjct: 22 SGMIDNA---VQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
TY GL + + + L M F+P + + C+ ++ ++ +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+V++G P + +LI GL G+V +A E M+ G
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 192/445 (43%), Gaps = 62/445 (13%)
Query: 54 STSLVENVLGRLFASHSNGLK-ALEFFNFTLHHSQSPPSHVSFEMT---LHILTRMRYFD 109
S+SL ++ R+ + K ALEF+N+ L + S FE + +H+L R FD
Sbjct: 52 SSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFD 111
Query: 110 KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQ---SFEDTLDGFRRM------------ 154
A ++ L + ++ I YQ S D D R
Sbjct: 112 DALSIMANLMSVEGE--KLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYE 169
Query: 155 ----------------------------EEDVF---------VGREFGTDEFNVLLKAFC 177
E D F +G + FN+++ +FC
Sbjct: 170 VIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFC 229
Query: 178 SQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVT-SVELFYHEMVKRG--FSP 233
+ ++ EA SVF +M+ P+ S N+++ G ++GD+ +++L + G SP
Sbjct: 230 KESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSP 289
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
+ VTYN I+ +CK GR R+ +M + T L+ G ++ +A +L
Sbjct: 290 NAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 294 NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
+E+ S+ LVV+T +YN+++ L DIE A+S++ +M K +++D T + GL R+
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRN 409
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
++ E ++++++ V LM +F ++ +L + + ++ +G A +
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 414 DLLITGLCSRGQVHEAFECSKQMLE 438
LI G G++ A E M++
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIK 494
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 171 VLLKAFCSQRQMKEARSVFGKMVS--RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
++++ C +KEA F + +S + D N L+ F + + M+
Sbjct: 401 IVVRGLCRNGYVKEAVE-FQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
+G S D +++ ID Y K+G+ L + + M + + ++++G AG
Sbjct: 460 QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGA 519
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI----EKRVELDGVTYH 344
A + N + +++V YN L+ L++ ++E A ++ +M EK V L VT++
Sbjct: 520 AEAVVNAMEIKDIVT----YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSL--VTFN 573
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
M L + E E+ + M +R VP + T L+ F ++ + + L +YL+ +
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQ 633
Query: 405 GYCPHAH 411
G PH H
Sbjct: 634 GVTPHEH 640
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 127/344 (36%), Gaps = 72/344 (20%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV----SRFSPDTKSMNILLLGFKESGDVTSVELFYH 224
FN+++ C M+ A + GKM + SP+ + N ++ GF ++G + E
Sbjct: 256 FNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRG 315
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT--------------- 269
+MVK G + TY +D Y + G + LRL +EM + V
Sbjct: 316 DMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEG 375
Query: 270 ------------------IETITTLIHGAGIVQNA--GKARQLFNEIPSRNLVVDTGVYN 309
I+ T I G+ +N +A + +I + LV D +N
Sbjct: 376 DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM--- 366
L+ +R K + A ++ M+ + + LD +++ T+ G ++ +E E+Y M
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 367 ----------------AQRNFVPQTRTVVMLMKY---FCQNFRLDLSLSLWNYLVEKGYC 407
++R VV M+ N L+ SL N
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDIL 555
Query: 408 PHAHALD-----------LLITGLCSRGQVHEAFECSKQMLERG 440
D ++I LC G +A E K M+ERG
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG 599
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 97/236 (41%), Gaps = 5/236 (2%)
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G SPD +R T + G ++E+ F ++ + + V +
Sbjct: 145 GSSPDVFDSLVRACT--QNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+++ E+ S V + +N +I + + + ALS+ M++ V + V+++ M G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 350 LMRSTGIEGVSELYQKMA--QRNFV-PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
++ + +L KM NFV P T ++ FC+ RLDL+ + +V+ G
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
+ L+ G EA +M +G ++ + + +L GDI+
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 26/282 (9%)
Query: 172 LLKAFCSQRQMKEARSVFGKM----------VSRFSPDTKSMNILLLGFKESGDVTSVEL 221
L+ FC +K+A V G+M V DT N L+ V ++E+
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLV--------VPALEV 70
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
M RG SP+ VTY+ I CK GR D R L EM+ +K P + T + LI
Sbjct: 71 L-KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
K ++ + ++ + Y++LI L ++ A+ ++D MI K + V
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY T+ G +S+ ++ +L M QR T + L+K + Q ++DL+L ++ Y+
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
G P+ + ++++ GL + G+V +A L R HM
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKA-------LSRFEHM 284
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 1/215 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F+ L+ A+ + ++ + SV+ M+ P+ + + L+ G V M+
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G +P+ VTY+ + + K R DG++LL++M +R + TLI G
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A +F + S L+ + YN ++ L + ++E ALS + M + R +LD +TY M
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
G+ ++ ++ +L+ K+ + P + +++
Sbjct: 301 HGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 8/242 (3%)
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME----RRKFVPTIETITTLIHGA 280
+M+K G PD VT + ++ +C D + + +ME +R V I TL
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+V A ++ + R + + Y++LIT L +S + A + EM K++ +
Sbjct: 63 LVVP----ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
+T+ + + + V +Y+ M Q + P T L+ C + R+D ++ + +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
++ KG P+ L G +V + + M +RG + S L + Q+G
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 461 ID 462
ID
Sbjct: 239 ID 240
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 6/318 (1%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
T +N+ + A C ++ +AR + M + PD S N L+ G+ + G L + +
Sbjct: 343 TSTYNIYICALCDFGRIDDARELLSSMAA---PDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
+ P VTYN ID C+ G RL EEM + P + T TTL+ G N
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGN 459
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT-YH 344
A ++++E+ + + D Y LR D + A L +EM+ +T Y+
Sbjct: 460 LSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYN 519
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
GL + + E +K+ + VP T +++ + +N + ++ +L++ ++ K
Sbjct: 520 VRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK 579
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
P +LI G G++ +AF+ S +M +RG + + L + ++G+ID+
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 465 KELDQMIKNLLSVLPPSK 482
+ K +PP+K
Sbjct: 640 YRY--LCKMEEEGIPPNK 655
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 169/394 (42%), Gaps = 21/394 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
PS + + L +L R +KA + ET H + T+ + ML K E
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKA-SAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDK 259
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLL 208
+ M+ EF +N+L+ F +M+EAR G M S F+ S N L+
Sbjct: 260 IWLEMKRRNI---EFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G+ + G EM+ G P TYNI I C GR D LL M P
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----AP 372
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ + TL+HG + +A LF+++ + ++ YN LI L S ++E A L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ-----TRTVVML-M 382
+EM + + D +TY T+ G +++ + +E+Y +M ++ P TR V L +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 383 KYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
+ FRL + + + P ++ I GLC G + +A E +++ G
Sbjct: 493 GDSDKAFRLHEEM-----VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLV 547
Query: 443 MSAASFLMLERFLLQSGDIDKLKEL-DQMIKNLL 475
++ + R L++G + L D+M++ L
Sbjct: 548 PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 45/358 (12%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQS 143
S + P VS+ +H +M F +A +L + HPS++T
Sbjct: 368 SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT---------------- 411
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKS 202
+N L+ C ++ A+ + +M ++ PD +
Sbjct: 412 -------------------------YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM- 261
L+ GF ++G+++ Y EM+++G PD Y R + G RL EEM
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMV 506
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
P + I G V N KA + +I LV D Y +I L +
Sbjct: 507 ATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQF 566
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
+ A +L DEM+ KR+ +TY + G ++ +E + +M +R P T L
Sbjct: 567 KMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+ C+ +D + + E+G P+ ++ +LI+ C + E + K+ML++
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDK 684
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 8/300 (2%)
Query: 189 FGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
F KM+ + F P ++ NI+L ++S + Y M++ G P +T+N +D+ K
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
G ++ EM+RR + T LI+G +AR+ ++ V
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
+N LI + + A + DEM+ + TY+ L I+ EL MA
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
P + LM + + + + L++ L P + LI GLC G +
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMIKNLLSVLPPSKGHAT 486
A ++M + ++ L + +++G++ E+ D+M++ + P + T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK--GIKPDGYAYTT 484
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%)
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
Y KK L E+M R+ F+P++ ++ + KA ++ + ++
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
+N ++ + ++ D+E + EM + +E VTY+ + G ++ +E +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
M + F + L++ +C+ D + + + ++ G P ++ I LC
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 424 GQVHEAFECSKQM 436
G++ +A E M
Sbjct: 357 GRIDDARELLSSM 369
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 2/293 (0%)
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV--SRFSPDTKSMNILL 207
F +EE V G + L+ C + ++A +F K+V + P+ + ++
Sbjct: 306 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMI 365
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G+ + + E+ + M ++G P+ TY I+ +CK G FG L+ M F+
Sbjct: 366 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P I T I A +A +L N+ S L D Y LI + DI AL+
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
M + E D + + R ++ L+Q + +P T ++ +C+
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK 545
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+DL+L ++ + G P + LI+GLC + V EA + + M++RG
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 119/281 (42%), Gaps = 2/281 (0%)
Query: 185 ARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A +VF +M R PD+ S ++++G G + + + M++RGF PDN T + +
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
C+ G + +M F P + T+LI G + +A ++ E+
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV-TYHTMFLGLMRSTGIEGVSEL 362
+ + ALI L + E A L +++ V TY +M G + + L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 363 YQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCS 422
+ +M ++ P T L+ C+ + L N + ++G+ P+ + + I LC
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 423 RGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+ + EA+E + G ++ +L + + DI++
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQ 481
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 124/274 (45%), Gaps = 6/274 (2%)
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
+L+ F ++ EA + M ++ +P + +MN +L E G + E + EM R
Sbjct: 152 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA--G 287
G PD+ +Y + + + G+ + R L M +R F+P T T ++ + +N
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL--TALCENGLVN 269
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A F ++ + + +LI L + I+ A +++EM+ + + T+ +
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 348 LGLMRSTGIEGVSELYQKMAQRN-FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
GL + E L+ K+ + + + P T ++ +C+ +L+ + L++ + E+G
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
P+ + LI G C G A+E M + G
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 134/371 (36%), Gaps = 7/371 (1%)
Query: 102 LTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVG 161
L + + +KA+ L + R+ + + M+ K F RM+E G
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ---G 388
Query: 162 REFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVE 220
+ + L+ C A + M F P+ + N + +
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
++ G D VTY I I CK+ L M + F + LI
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ ++ +LF + S L+ Y ++I+ + DI+ AL M D
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
TY ++ GL + + ++ +LY+ M R P T V L +C+ ++ L
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEP 628
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
L +K + + L+ LCS +V A +++LE+ + +SG
Sbjct: 629 LDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGK 685
Query: 461 IDKLKELDQMI 471
+ + +L + I
Sbjct: 686 NNLVTDLTERI 696
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 140/300 (46%), Gaps = 2/300 (0%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N +L C Q + EA + KM SR P+ S N ++LG ++ + + +++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
+G P+N TY+I ID + + L ++ M T+I+G V K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 289 ARQLF-NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
AR+L N I + L V YN++I + +++SA++ +EM + + +TY ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL ++ ++ E+ +M + L+ FC+ ++ + +L++ L+E+G
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P + LI+G + G + A + K+ML+ G ++ L LL+ G++ EL
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 2/285 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS--RFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+ ++ C Q +AR + M+ R S N ++ GF + G++ S Y EM
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
G SP+ +TY ++ CK R L + +EM+ + I LI G N
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
A LF+E+ L +YN+LI+ ++ +AL L +M++ + D TY T+
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
GL++ + SELY +M VP +++ + + + ++ + +
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
P+ + +I G G + EAF +ML++G A+F +L
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 177/427 (41%), Gaps = 59/427 (13%)
Query: 61 VLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRM--RYFDKAWMLLQET 118
V+ L +N AL F+N+ S F + +HIL Y + +L++
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+ ++P+ + S+++SK+ D+ F G E + FN LL A+
Sbjct: 135 STSNPTPMA----SVLVSKLV------DSAKSF---------GFEVNSRAFNYLLNAYSK 175
Query: 179 QRQMKEARSVFGKM----VSRFSP----------------DTKSMNILLLGFKESGDVTS 218
RQ A + +M V F P + K + ++ GD +
Sbjct: 176 DRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVT 235
Query: 219 VELFYH----------------EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
+L ++RG PD++ Y++ + CK LL EM+
Sbjct: 236 TQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMK 295
Query: 263 RRKF-VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
+K VP+ ET T++I + N A +L +E+ S + ++ +LIT ++ D+
Sbjct: 296 EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
SAL L D+M ++ + VT+ + ++ +E E Y+KM P V +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
++ + + + + +L L++ E G + + +++ LC +G+ EA E +M RG
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Query: 442 HMSAASF 448
+ S+
Sbjct: 475 GPNVVSY 481
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 103/261 (39%), Gaps = 40/261 (15%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ +++ ++ L + D+A + +++ + + + A ++ K + E
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQA-LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
F + E+ G +N L+ F + M A ++ KM+ D + L+
Sbjct: 676 LFSELLEE---GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 732
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G + G++ Y EM G PD + Y + ++ KKG+F +++ EEM++ P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ +YNA+I R +++ A L
Sbjct: 793 NVL-----------------------------------IYNAVIAGHYREGNLDEAFRLH 817
Query: 329 DEMIEKRVELDGVTYHTMFLG 349
DEM++K + DG T+ + G
Sbjct: 818 DEMLDKGILPDGATFDILVSG 838
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/238 (18%), Positives = 102/238 (42%), Gaps = 1/238 (0%)
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
GF ++ +N ++ Y K + + ++ +M +P + + + +A
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
++L++ + + + D L+ A LR + AL ++ IE+ E D + Y
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 350 LMRSTGIEGVSELYQKMAQRNF-VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
++ + + L ++M ++ VP T ++ + +D ++ L + ++ G
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE 466
+ A LITG C + A +M + G ++ +F +L + ++G+++K E
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALE 395
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 3/302 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L++ FC Q+KEA +F M+ R P+ + L+ G G + M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++ P+ VTYNI I+ CK G D + ++E M++R+ P T L+ G +
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 288 KARQLFNEIPSRNLVVDTGV--YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A +L + + D V YNALI L + + AL + D ++EK D VT +
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ +++ + EL+++++ V + T ++ FC+ L+++ L +
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
P + L++ LC G + +A+ ++M SF ++ L++GDI +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 466 EL 467
L
Sbjct: 585 SL 586
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 36/308 (11%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSV 219
G F N+LLK C + +A S+ +M + PD S N ++ GF E ++
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+EM G S VT+ I ID +CK G+ + + L+EM KF+
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM---KFM------------ 241
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
L D VY +LI +++ +L DE++E+
Sbjct: 242 --------------------GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPC 281
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
+TY+T+ G + ++ SE+++ M +R P T L+ C + +L L N
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
++EK P+A +++I LC G V +A E + M +R ++ +L L G
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG 401
Query: 460 DIDKLKEL 467
D+D+ +L
Sbjct: 402 DLDEASKL 409
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M+KRGF+ + +NI + C+ G + LL EM R +P + + T+I G +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
KA +L NE+ + LI A ++ ++ A+ + EM +E D V Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ G ++ L+ ++ +R P T L++ FC+ +L + ++ +++E+G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
P+ + LI GLC G+ EA + M+E+ +A ++ ++ L + G +
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 466 ELDQMIK 472
E+ +++K
Sbjct: 373 EIVELMK 379
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV---SRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
+N+LL C++ + EA + M+ S PD S N L+ G + + Y
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
+V++ + D VT NI +++ K G + L +++ K V +T T +I G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
A+ L ++ L YN L+++L + ++ A L +EM D V+++
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
M G +++ I+ L M++ P T L+ F + LD ++S ++ +V+ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+ P AH D ++ S+G+ + E K+++++
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 2/270 (0%)
Query: 173 LKAFC--SQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L++ C S Q+K A SVF + V S + N L+ S + FY +M++
Sbjct: 43 LRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETD 102
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
+ V+ + ++ Y + + G +L M +R F + L+ G GKA
Sbjct: 103 TFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAV 162
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
L E+ +L+ D YN +I K++E AL L +EM VT+ +
Sbjct: 163 SLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
++ ++ ++M L++ FC LD +L++ ++E+G P A
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 411 HALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ LI G C GQ+ EA E + M+ERG
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEM 226
++N LL + C + + +A +F +M + PD S NI++ G ++GD+ S E M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+ G SPD TY+ I+ + K G + + ++M F P +++
Sbjct: 591 SRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGET 650
Query: 287 GKARQLFNEIPSRNLVVD 304
K +L ++ +++V+D
Sbjct: 651 DKLTELVKKLVDKDIVLD 668
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 168/410 (40%), Gaps = 68/410 (16%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ LH + D A LLQE R + P+ T + L K+ + E+
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS---------- 197
L R+M E G T N+++ C ++ +A + M S
Sbjct: 454 L---RKMNEK---GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 198 --------------PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
PD + + LL G ++G + + EM+ PD+V YNI I
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH 567
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
+CK+G+ R+L++ME++ ++ET +LI G GI + L +E+ + +
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRV--------------------------- 336
+ YN I L + +E A +L+DEM++K +
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 337 --------ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
+ +G+ Y MF L+ + + +EL + + R F T L++ C+
Sbjct: 688 ETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKK 746
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
L+++ + + ++++GY AL +I GL G EA + +M+E
Sbjct: 747 DELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 149/353 (42%), Gaps = 32/353 (9%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVG-REFGTDEFNVLLKAFCSQRQ 181
P ++T + +S + K D F ME D ++G + +N++LK FC
Sbjct: 250 PDIVTFNSR---ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 182 MKEARSVFGKMVSRFSPDTKSM---NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
+++A+++F + R + D S+ NI L G G E +M +G P +Y
Sbjct: 307 LEDAKTLFESI--RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
NI +D CK G D ++ M+R P T L+HG V A+ L E+
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
N + + N L+ +L + I A L+ +M EK LD VT + + GL S ++
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 359 VSELYQKM-----------------------AQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
E+ + M + N +P T L+ C+ R +
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
+L+ ++ + P + A ++ I C +G++ AF K M ++G H S ++
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 176/432 (40%), Gaps = 44/432 (10%)
Query: 77 EFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHP-SLITLKAMSIML 135
E N L S S + I + + DKA+ Q P + ++ +++L
Sbjct: 60 ELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 136 SKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR 195
K + E ++ M V G T FN+L++A C + AR +F +M +
Sbjct: 120 ESCIKERRVEFVSWLYKDM---VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEK 176
Query: 196 -FSPDTKSMNILLLGFKESG---------------DVTSVELFYHEMV------------ 227
P+ + IL+ G+ ++G V ++ Y+ +V
Sbjct: 177 GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 228 --------KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV----PTIETITT 275
+ G PD VT+N RI CK+G+ D R+ +ME +++ P T
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
++ G V A+ LF I + + YN + L+R A +++ +M +K
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
+ +Y+ + GL + + + M + P T L+ +C ++D +
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
SL ++ P+A+ ++L+ L G++ EA E ++M E+G + + ++ L
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476
Query: 456 LQSGDIDKLKEL 467
SG++DK E+
Sbjct: 477 CGSGELDKAIEI 488
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 146/317 (46%), Gaps = 8/317 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N+LL++ +R+++ ++ MV +P T + N+L+ +S V + + EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G P+ T+ I + YCK G GL LL ME +P T++
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM-IEKRVEL---DGVTY 343
+ ++ ++ LV D +N+ I+AL + + A + +M +++ + L + +TY
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ M G + +E L++ + + + + ++ + ++ ++ + + ++ + +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
KG P ++ ++L+ GLC G + +A M G A ++ L G +D
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 464 LKE-LDQMIKNLLSVLP 479
K L +M++N + LP
Sbjct: 415 AKSLLQEMMRN--NCLP 429
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 132/304 (43%), Gaps = 7/304 (2%)
Query: 176 FCSQRQMKEARSVFGKMVSRFSPDTKSM---NILLLGFKESGDVTSVELFYHEMVKRGFS 232
F + +A F + SRF + S+ N+LL + V V Y +MV G +
Sbjct: 85 FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIA 144
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
P T+N+ I C L +EM + P T L+ G K +L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
N + S ++ + +YN ++++ R + + ++++M E+ + D VT+++ L +
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 353 STGIEGVSELYQKMAQRNFV----PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
+ S ++ M ++ P + T +++K FC+ L+ + +L+ + E
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELD 468
+ ++ + GL G+ EA KQM ++G S S+ +L L + G + K +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 469 QMIK 472
++K
Sbjct: 385 GLMK 388
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 159/394 (40%), Gaps = 25/394 (6%)
Query: 75 ALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIM 134
A +FF +++ + S S+ + HIL R + A +L+E ++
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKE---------------MV 169
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
LSK D D G FG F+ L ++EA F KM
Sbjct: 170 LSKADC-----DVFDVLWSTRNVCVPG--FGV--FDALFSVLIDLGMLEEAIQCFSKMKR 220
Query: 195 -RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
R P T+S N LL F + G V+ F+ +M+ G P TYNI ID CK+G
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
L EEM+ R VP T ++I G G V F E+ D YNALI
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
+ + L EM ++ + V+Y T+ + ++ + Y M + VP
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
T L+ C+ L + L N +++ G + LI GLC ++ EA E
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 434 KQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+M G + AS+ L +++ ++D+ EL
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 149/355 (41%), Gaps = 43/355 (12%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P +T +M K+ + +DT+ F M++ + E +N L+ FC ++
Sbjct: 295 PDTVTYNSMIDGFGKVGR---LDDTVCFFEEMKD---MCCEPDVITYNALINCFCKFGKL 348
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
+ +M P+ S + L+ F + G + FY +M + G P+ TY
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
ID CK G D RL EM + + T T LI G + +A +LF ++ + +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL----------- 350
+ + YNALI +++K+++ AL L++E+ + ++ D + Y T GL
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 351 ----MRSTGIEGVSELY--------------------QKMAQRNFVPQTRTVVMLMKYFC 386
M+ GI+ S +Y +M + + T +L+ C
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588
Query: 387 QNFRLDLSLSLWNYLVEK-GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+N + ++ +N + G +A +I GLC QV A +QM+++G
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 38/326 (11%)
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLL 208
D FR E + VG E+ + L+ C +MKEA +FGKM DT
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM------DTA------- 466
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G P+ +YN I + K L LL E++ R P
Sbjct: 467 ---------------------GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ T I G ++ A+ + NE+ + ++ +Y L+ A +S + L L+
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM--LMKYFC 386
DEM E +E+ VT+ + GL ++ + + + +++ +F Q + ++ C
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN-DFGLQANAAIFTAMIDGLC 624
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAA 446
++ +++ + +L+ +V+KG P A L+ G +G V EA +M E G +
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLL 684
Query: 447 SFLMLERFLLQSGDIDKLKE-LDQMI 471
++ L L + K + L++MI
Sbjct: 685 AYTSLVWGLSHCNQLQKARSFLEEMI 710
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 17/335 (5%)
Query: 102 LTRMRYFDKA---------WMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFR 152
L MR+F ++ + L+Q AR PSL A+S L+ + S E L
Sbjct: 128 LNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSL---NAISTCLNLL--IDSGEVNLSRKL 182
Query: 153 RMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFS-PDTKSMNILL-LG 209
+ +G + T FN+L+K C + A V +M S S P++ + + L+
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
F S +VELF + K G SPD VT+N+ I+ +C+ G ++L+ M++ P
Sbjct: 243 FAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPN 302
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
+ + L++G V +A+Q F+E+ L +DT Y L+ R+ + + A+ L+
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
EM R D +TY+ + GL E ++ + + +++ C N
Sbjct: 363 EMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNG 422
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
L+ ++ + + E+G PH + L+ LC G
Sbjct: 423 ELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 117/265 (44%), Gaps = 2/265 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
++ L+ + + KEA +F M+S+ SPD + N+++ GF +G+V + M
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
K G +P+ Y+ ++ +CK G+ + + +E+++ TTL++
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A +L E+ + DT YN ++ L E AL ++D+ + V L+ +Y +
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
L + +E + M++R P T L+ C++ ++ + + + G
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Query: 407 CPHAHALDLLITGLCSRGQVHEAFE 431
P + ++ +C ++ FE
Sbjct: 475 IPGPKSWGAVVESICKERKLVHVFE 499
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 10/216 (4%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--TH 122
LFA HS +A+E F + P V+F + ++ R ++A +L + +
Sbjct: 242 LFA-HSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P++ A+ K+ K Q + T D ++ G + T + L+ FC +
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKK------TGLKLDTVGYTTLMNCFCRNGET 354
Query: 183 KEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
EA + G+M SR DT + N++L G G + G + +Y I
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
++ C G ++ L M R P T L+
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/292 (17%), Positives = 127/292 (43%), Gaps = 40/292 (13%)
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM--ERRKFVPTI------ 270
+++F ++GF+ +N TY++ +D + +F +L +M E +F ++
Sbjct: 73 LDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMR 132
Query: 271 -----ETITTLIHGAGIVQNAGKARQLFNEIPSR-NLVVDTG------------------ 306
+ ++ ++Q + + N I + NL++D+G
Sbjct: 133 HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGL 192
Query: 307 -----VYNALITALLRSKDIESALSLMDEMIEKRVEL-DGVTYHTMFLGLMRSTGIEGVS 360
++N L+ ++ DI A +++EM + + +TY T+ L + +
Sbjct: 193 QPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAV 252
Query: 361 ELYQKMAQRNFV-PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
EL++ M + + P T +++ FC+ ++ + + +++ + G P+ + L+ G
Sbjct: 253 ELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNG 312
Query: 420 LCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKELDQM 470
C G++ EA + ++ + G + + L ++G+ D+ +K L +M
Sbjct: 313 FCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM 364
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 146 DTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKS 202
+ L+ M +DV G D + ++ +C +M+EA S+ M+ P +
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
N+L+ G+ ++G++ + E +M+ G PD VT+ ID YC+ G+ G RL EEM
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
R P T + LI+ KAR+L ++ S++++ +YN +I ++ +
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLG-LMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A +++EM +K+ + D +T+ + +G M+ E VS ++ KM P TV L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSPDKITVSSL 493
Query: 382 M 382
+
Sbjct: 494 L 494
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 9/343 (2%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
+L+ + K ED + F +E + T FN+L++ C + ++A + G M
Sbjct: 177 LLNTLVKLDRVEDAMKLF---DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM- 232
Query: 194 SRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKRG--FSPDNVTYNIRIDTYCKKG 249
S F PD + N L+ GF +S ++ + + VK G SPD VTY I YCK G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ + LL++M R PT T L+ G A ++ ++ S D +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
+LI R + L +EM + + + TY + L + EL ++A +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ +PQ ++ FC+ +++ + + + +K P +LI G C +G++ EA
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+M+ G + L LL++G + L+Q+ +
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 118/241 (48%), Gaps = 5/241 (2%)
Query: 146 DTLDGFRRMEEDVFVGREFGTD--EFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKS 202
+ L+ M +DV G D + ++ +C +M+EA S+ M+ P +
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
N+L+ G+ ++G++ + E +M+ G PD VT+ ID YC+ G+ G RL EEM
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMN 374
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
R P T + LI+ KAR+L ++ S++++ +YN +I ++ +
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 323 SALSLMDEMIEKRVELDGVTYHTMFLG-LMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A +++EM +K+ + D +T+ + +G M+ E VS ++ KM P TV L
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSPDKITVSSL 493
Query: 382 M 382
+
Sbjct: 494 L 494
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 9/343 (2%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
+L+ + K ED + F +E + T FN+L++ C + ++A + G M
Sbjct: 177 LLNTLVKLDRVEDAMKLF---DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM- 232
Query: 194 SRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKRG--FSPDNVTYNIRIDTYCKKG 249
S F PD + N L+ GF +S ++ + + VK G SPD VTY I YCK G
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ + LL++M R PT T L+ G A ++ ++ S D +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
+LI R + L +EM + + + TY + L + EL ++A +
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ +PQ ++ FC+ +++ + + + +K P +LI G C +G++ EA
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+M+ G + L LL++G + L+Q+ +
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 160/361 (44%), Gaps = 27/361 (7%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
S + + L +L +MR F++ + E ++ + K ++L++ A ++ +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSK-RDGFVNEKTYEVLLNRYAAAHKVDEAVGV 200
Query: 151 FRRMEEDVFVGREFGTDE----FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNIL 206
F R +EFG D+ F+ LL C + ++ A ++F F D K+MN++
Sbjct: 201 FERR-------KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMI 253
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L G+ G+V + F+ +++ PD V+Y I+ KKG+ G + L M +
Sbjct: 254 LNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRR 313
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
P ++ +I + +A ++F EI + + YN+L+ L + + E
Sbjct: 314 NPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWE 373
Query: 327 LMDEMIEKRVELDG-------VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
L++EM EL G VT+ + RS ++ V E +MA+ +
Sbjct: 374 LVEEM-----ELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLE---RMAKNKCEMTSDLYN 425
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
++ + + Q + + +W+ + G P + I GL ++G++ EA ++M+ +
Sbjct: 426 LMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSK 485
Query: 440 G 440
G
Sbjct: 486 G 486
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 169/406 (41%), Gaps = 24/406 (5%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPS-HVSFEMTLHILTRMRYFDKAWMLLQETARTH- 122
LF+ + + FF +T S S S++M L ILT+ ++F A LL + A+
Sbjct: 53 LFSGYGGPSLSWSFFIWTDSLPSSKHSLQSSWKMIL-ILTKHKHFKTAHQLLDKLAQREL 111
Query: 123 -PSLITLKAM---------------SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
S + L+++ S ++ AK D++ F ++ G +
Sbjct: 112 LSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS---CGLKPHL 168
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
VLL + QR +F KMV + N+L+ +SGD E E
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSE 228
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M ++G PD TYN I YCKK + L + + MER P I T + IHG
Sbjct: 229 MEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGR 288
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A +LF EI ++ + Y LI R DI+ AL L + M + VTY++
Sbjct: 289 MREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNS 347
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ L I + L +M+ + P T L+ +C+ + ++ + ++E G
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESG 407
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
++ LI G C ++ A E M+E+G A++ L
Sbjct: 408 LKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 157/381 (41%), Gaps = 16/381 (4%)
Query: 99 LHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEE-- 156
L+ L + R D W + ++ + + + ++++ +K E MEE
Sbjct: 175 LNSLVKQRLTDTVWKIFKKMVKL-GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 157 ---DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKE 212
D+F +N L+ +C + EA SV +M S +P+ + N + GF
Sbjct: 234 VFPDIFT--------YNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIET 272
G + + E +K + ++VTY ID YC+ + LRL E ME R F P + T
Sbjct: 286 EGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVT 344
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+++ +A +L E+ + + D N LI A + +D+ SA+ + +MI
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMI 404
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
E ++LD +Y + G + +E E M ++ F P T L+ F + D
Sbjct: 405 ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQD 464
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
L ++G C LI +C QV A + M ++G + F +
Sbjct: 465 EITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMA 524
Query: 453 RFLLQSGDIDKLKELDQMIKN 473
++G + + L ++ N
Sbjct: 525 YAYWRTGKVTEASALFDVMYN 545
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 11/242 (4%)
Query: 139 AKYQSFEDTLDGFRRMEE--------DVFVGREF--GTDEFNVLLKAFCSQRQMKEARSV 188
A + ++ +DG+ RM + +V R F G +N +L+ C +++EA +
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRL 364
Query: 189 FGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
+M + PD + N L+ + + D+ S +M++ G D +Y I +CK
Sbjct: 365 LTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCK 424
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
+ L M + F P T + L+ G + +L E R L D +
Sbjct: 425 VLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y LI + + + ++ A L + M +K + D V + TM R+ + S L+ M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMY 544
Query: 368 QR 369
R
Sbjct: 545 NR 546
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWML--LQETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
+HV++ + RM D+A L + E+ P ++T ++ L K+ +
Sbjct: 305 ANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSI---LRKLCE------- 354
Query: 148 LDGFRRMEEDVFV---GREFGTDEF--NVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTK 201
DG R + G++ D N L+ A+C M A V KM+ S D
Sbjct: 355 -DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMY 413
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
S L+ GF + ++ + + M+++GFSP TY+ +D + + + + +LLEE
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
E+R + LI ++ A+ LF + + LV D+ ++ + A R+ +
Sbjct: 474 EKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKV 533
Query: 322 ESALSLMDEMIEKRVELDGVTYHTM 346
A +L D M +R+ ++ Y ++
Sbjct: 534 TEASALFDVMYNRRLMVNLKLYKSI 558
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 9/235 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETA--RTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P V++ L L +A LL E + + P IT + I Y ED
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL------INAYCKIEDM 393
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
+ + ++ + G + + L+ FC +++ A+ M+ + FSP + + L
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ GF + E KRG D Y I CK + L E ME++
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGL 513
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
V TT+ + +A LF+ + +R L+V+ +Y ++ + D+
Sbjct: 514 VGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 13/257 (5%)
Query: 163 EFGTDEFNVLLKAFCSQ----------RQMKEARSVFGKMVSRFSPDTKSMNILLLGFKE 212
+F T +N+ + F ++MKE SV+G S F PD + N L+
Sbjct: 245 KFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYG---SSFGPDICTYNSLIHVLCL 301
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIET 272
G + + E+ G PDN TY I I CK R D +R+ EM+ FVP
Sbjct: 302 FGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
L+ G + +A QLF ++ + YN LI L R+ E+ +L ++
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
+K +D +T+ + L L R +EG +L ++M R F T+ L+ F + R D
Sbjct: 422 KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Query: 393 LSLSLWNYLVEKGYCPH 409
L ++ E P+
Sbjct: 482 WKEKLMKHIREGNLVPN 498
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 8/269 (2%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKM--VSRFSPDTKSMNILLLGFKESGDVTSVELF 222
GT N LL E + VF K+ + RF DT S NI + GF GD+ +
Sbjct: 211 GTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSL 270
Query: 223 YHEMVKRG------FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTL 276
+ EM +R F PD TYN I C G+ D L + +E++ P T L
Sbjct: 271 FKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRIL 330
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRV 336
I G A +++ E+ V DT VYN L+ L+++ + A L ++M+++ V
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
TY+ + GL R+ E L+ + ++ T ++ C+ +L+ ++
Sbjct: 391 RASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVK 450
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
L + +G+ + L+ G +G+
Sbjct: 451 LVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 140/332 (42%), Gaps = 28/332 (8%)
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
I+L + + FE L MEE +G ++ +L A + +++ A S+ K+
Sbjct: 132 ILLDSLIRSGKFESALGVLDYMEE---LGDCLNPSVYDSVLIALVKKHELRLALSILFKL 188
Query: 193 ----------------VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEM--VKRGFSPD 234
+ + P T ++N LL+G + + + + + ++ +KR F D
Sbjct: 189 LEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKR-FKFD 247
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRK------FVPTIETITTLIHGAGIVQNAGK 288
+YNI I + G L L +EM+ R F P I T +LIH + A
Sbjct: 248 TWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKD 307
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A +++E+ D Y LI +S ++ A+ + EM D + Y+ +
Sbjct: 308 ALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLD 367
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
G +++ + +L++KM Q T +L+ +N R + +L+ L +KG
Sbjct: 368 GTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFV 427
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
A ++ LC G++ A + ++M RG
Sbjct: 428 DAITFSIVGLQLCREGKLEGAVKLVEEMETRG 459
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP-DNVTYNIRIDTYCKKGRFGDGLRL 257
D MN L + GD++ + G + + TYN + ++ KKG F +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
L++M I T +I G G + A A + + + + +D +YN LI AL +
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTM 346
+ ++ A L D M + D V+Y+TM
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTM 741
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 188/430 (43%), Gaps = 16/430 (3%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
ST LV ++L LF S + L+ ++ + L + +VS + +L R DK W
Sbjct: 122 STGLVWDML--LFLS--SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD 177
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
+ +E + S ++ + + Q ED + F R E +G + FN ++
Sbjct: 178 VYKEIKDKNE-----HTYSTVVDGLCRQQKLEDAVL-FLRTSEWKDIGPSVVS--FNSIM 229
Query: 174 KAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
+C + A+S F ++ P S NIL+ G G + +M K G
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD+VTYNI + G ++ +M + P + T T L+ G + N L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 293 FNEIPSRNLVVDTGV-YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ SR +++ + + +++ L ++ I+ ALSL ++M + D V Y + GL
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
+ + LY +M + +P +RT L+ CQ L + SL + L+ G
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMI 471
+++I G G + EA E K ++E G S A+F L ++ +I + +++ +I
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 472 KNLLSVLPPS 481
K L L PS
Sbjct: 530 K--LYGLAPS 537
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 156/384 (40%), Gaps = 16/384 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P +++ + L ++ D +LL++ L ++ S+MLS + K ++ L
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLL 208
F +M+ D G +++++ C + A ++ +M R P++++ LLL
Sbjct: 385 LFNQMKAD---GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G + G + ++ G + D V YNI ID Y K G + L L + + P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
++ T +LI+G QN +AR++ + I L Y L+ A + +S L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK------------MAQRNFVPQTR 376
EM + + VTY +F GL R E + + ++ M P
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
T +++Y C+ L + + + + ++LI LC G + +A +
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 437 LERGRHMSAASFLMLERFLLQSGD 460
E+ +S ++ L + GD
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGD 705
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 144/335 (42%), Gaps = 12/335 (3%)
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKES 213
EE F E +++LL R + ++ + KM + + T+S N +L F+E+
Sbjct: 113 EEGTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET 172
Query: 214 GDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETI 273
+ V Y E+ + + TY+ +D C++ + D + L E + P++ +
Sbjct: 173 DKMWDV---YKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSF 225
Query: 274 TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIE 333
+++ G + A+ F + LV +N LI L I AL L +M +
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 334 KRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDL 393
VE D VTY+ + G I G E+ + M + P T +L+ CQ +D+
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 394 SLSLWNYLVEKGYCPHA-HALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
L L ++ +G+ ++ ++++GLC G++ EA QM G ++ ++
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 453 RFLLQSGDID-KLKELDQMIKNLLSVLPPSKGHAT 486
L + G D L D+M +LP S+ H
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDK--RILPNSRTHGA 438
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 56/382 (14%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--------TARTHPSL 125
+AL FN + P V++ + +H L ++ FD A L E +RTH +L
Sbjct: 381 EALSLFN-QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 126 IT--------LKAMSIMLSKIAKYQSFEDTL-----DGFRR---MEED-------VFVGR 162
+ L+A S++ S I+ ++ + L DG+ + +EE + G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVEL 221
FN L+ +C + + EAR + + + +P S L+ + G+ S++
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
EM G P NVTY++ C+ + + +L E R F
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE---RIF--------------- 601
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
K +Q ++ S + D YN +I L R K + A ++ M + ++
Sbjct: 602 -----EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY+ + L I + ++N L+K C ++++ L++ L
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 402 VEKGYCPHAHALDLLITGLCSR 423
+ +G+ +I LC R
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRR 738
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 188/430 (43%), Gaps = 16/430 (3%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
ST LV ++L LF S + L+ ++ + L + +VS + +L R DK W
Sbjct: 122 STGLVWDML--LFLS--SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD 177
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
+ +E + S ++ + + Q ED + F R E +G + FN ++
Sbjct: 178 VYKEIKDKNE-----HTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVS--FNSIM 229
Query: 174 KAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
+C + A+S F ++ P S NIL+ G G + +M K G
Sbjct: 230 SGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 289
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD+VTYNI + G ++ +M + P + T T L+ G + N L
Sbjct: 290 PDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVL 349
Query: 293 FNEIPSRNLVVDTGV-YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ SR +++ + + +++ L ++ I+ ALSL ++M + D V Y + GL
Sbjct: 350 LKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
+ + LY +M + +P +RT L+ CQ L + SL + L+ G
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIV 469
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMI 471
+++I G G + EA E K ++E G S A+F L ++ +I + +++ +I
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 472 KNLLSVLPPS 481
K L L PS
Sbjct: 530 K--LYGLAPS 537
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 156/384 (40%), Gaps = 16/384 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P +++ + L ++ D +LL++ L ++ S+MLS + K ++ L
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLL 208
F +M+ D G +++++ C + A ++ +M R P++++ LLL
Sbjct: 385 LFNQMKAD---GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 441
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G + G + ++ G + D V YNI ID Y K G + L L + + P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
++ T +LI+G QN +AR++ + I L Y L+ A + +S L
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK------------MAQRNFVPQTR 376
EM + + VTY +F GL R E + + ++ M P
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 621
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
T +++Y C+ L + + + + ++LI LC G + +A +
Sbjct: 622 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 681
Query: 437 LERGRHMSAASFLMLERFLLQSGD 460
E+ +S ++ L + GD
Sbjct: 682 QEQNVSLSKFAYTTLIKAHCVKGD 705
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 135/310 (43%), Gaps = 12/310 (3%)
Query: 180 RQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
R + ++ + KM + + T+S N +L F+E+ + V Y E+ + + TY
Sbjct: 138 RMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDV---YKEIKDK----NEHTY 190
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
+ +D C++ + D + L E + P++ + +++ G + A+ F +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
LV +N LI L I AL L +M + VE D VTY+ + G I G
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISG 310
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA-HALDLLI 417
E+ + M + P T +L+ CQ +D+ L L ++ +G+ ++ +++
Sbjct: 311 AWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVML 370
Query: 418 TGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID-KLKELDQMIKNLLS 476
+GLC G++ EA QM G ++ ++ L + G D L D+M
Sbjct: 371 SGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK--R 428
Query: 477 VLPPSKGHAT 486
+LP S+ H
Sbjct: 429 ILPNSRTHGA 438
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 56/382 (14%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--------TARTHPSL 125
+AL FN + P V++ + +H L ++ FD A L E +RTH +L
Sbjct: 381 EALSLFN-QMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 126 IT--------LKAMSIMLSKIAKYQSFEDTL-----DGFRR---MEED-------VFVGR 162
+ L+A S++ S I+ ++ + L DG+ + +EE + G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVEL 221
FN L+ +C + + EAR + + + +P S L+ + G+ S++
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
EM G P NVTY++ C+ + + +L E R F
Sbjct: 560 LRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE---RIF--------------- 601
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
K +Q ++ S + D YN +I L R K + A ++ M + ++
Sbjct: 602 -----EKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSA 656
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY+ + L I + ++N L+K C ++++ L++ L
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 402 VEKGYCPHAHALDLLITGLCSR 423
+ +G+ +I LC R
Sbjct: 717 LHRGFNVSIRDYSAVINRLCRR 738
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 47/407 (11%)
Query: 64 RLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHP 123
+L AS S+ L A E F++ S S + + L R RYF+ L+ + H
Sbjct: 56 KLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFN----LIDDVLAKHR 111
Query: 124 SL---ITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQR 180
S +T + + ++ A+ + E L F +M E F + N +L S R
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQ---PKHLNRILDVLVSHR 168
Query: 181 -QMKEARSVF-GKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
+++A +F + P+T+S N+L+ F + D++ + +M++R PD +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
I I +C+KG+ + LL++M + FVP
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVP------------------------------ 258
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
D Y L+ +L R + A L+ M K D V Y+TM LG R
Sbjct: 259 -----DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
++ M P + + L+ C D ++ KG+ PH + L+
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 419 GLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
G CS G+V EA + + +++ G + + ++ M+ + + +K+K
Sbjct: 374 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIK 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+ L+ G +Q KA +LF ++ +T YN L+ A + D+ A L +M+
Sbjct: 161 LDVLVSHRGYLQ---KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
E+ V D +Y + G R + G EL M + FVP + L+ C+ +L
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
+ L + KG P + +I G C + +A + ML G ++ S+ L
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLI 337
Query: 453 RFLLQSGDIDKLKE-LDQMI 471
L G D+ K+ L++MI
Sbjct: 338 GGLCDQGMFDEGKKYLEEMI 357
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 163/415 (39%), Gaps = 21/415 (5%)
Query: 71 NGLKALEFFNFTLHHSQSPPSHVS--FEMTLHILTRMRYFDKAWMLLQE-------TART 121
+G AL+F + + H+ +T HIL R R +D A +L+E ++
Sbjct: 89 HGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFV 148
Query: 122 HPSLITLKAMS--------IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLL 173
+L+T + I++ + +D+L+ FR M G N +L
Sbjct: 149 FGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMG---LYGFNPSVYTCNAIL 205
Query: 174 KAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
+ + S +M+ R PD + NIL+ G +M K G++
Sbjct: 206 GSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 265
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
P VTYN + YCKKGRF + LL+ M+ + + T LIH K L
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
++ R + + YN LI + A L++EM+ + + VT++ + G +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
+ +++ M + P + +L+ C+N DL+ + + G C
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+I GLC G + EA +M + G ++ L + G KE+
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 167/393 (42%), Gaps = 12/393 (3%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
++ M +H L R K ++LL++ + HP+ +T + I + + L
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL------INGFSNEGKVLIA 357
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
+ + E + G FN L+ S+ KEA +F M ++ +P S +LL G
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
++ + FY M + G +TY ID CK G + + LL EM + P
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
I T + LI+G V A+++ I L + +Y+ LI R ++ A+ + +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
MI + D T++ + L ++ + E + M +P T + L+ + +
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG 597
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
+ S+++ + + G+ P L+ GLC G + EA + K + + +
Sbjct: 598 EGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYN 657
Query: 450 MLERFLLQSGDIDKLKEL-DQMIKNLLSVLPPS 481
L + +SG++ K L +M++ S+LP S
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQR--SILPDS 688
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 164/399 (41%), Gaps = 17/399 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ VSF+ ++ KA+ + E + HP+ T ++ L K + E
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L + V T +N LL A C + +A S+FG+MV R PD+ + L
Sbjct: 641 LKSLHAVPAAV------DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694
Query: 207 LLGFKESGDVTSVELFYHEMVKRG-FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
+ G G LF E RG P+ V Y +D K G++ G+ E+M+
Sbjct: 695 ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P I T +I G + K L E+ ++N + YN L+ + KD+ ++
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
L +I + D +T H++ LG+ S +E ++ + R T ML+
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 874
Query: 386 CQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSA 445
C N ++ + L + G D +++ L + E+ +M ++G +
Sbjct: 875 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 934
Query: 446 ASFLMLERFLLQSGDIDK---LKELDQMIKNLLSVLPPS 481
++ L L + GDI +KE +MI + + PP+
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKE--EMIAH--KICPPN 969
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 139/284 (48%), Gaps = 24/284 (8%)
Query: 102 LTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L + + D+A +LL E ++ P ++T A+ K+ ++++ ++ + R
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR------ 506
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTS 218
VG ++ L+ C +KEA ++ M+ + D + N+L+ ++G V
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR---LLEEMERRKFVPTIETITT 275
E F M G P+ V+++ I+ Y G G+GL+ + +EM + PT T +
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGY---GNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 276 LIHG---AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
L+ G G ++ A K + + +P+ VDT +YN L+TA+ +S ++ A+SL EM+
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPA---AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR--NFVPQ 374
++ + D TY ++ GL R G ++ L+ K A+ N +P
Sbjct: 681 QRSILPDSYTYTSLISGLCRK-GKTVIAILFAKEAEARGNVLPN 723
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 157/391 (40%), Gaps = 15/391 (3%)
Query: 112 WMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEF 169
W L+E + P + T +I+++ + SFE + ++ME+ G +
Sbjct: 218 WSFLKEMLKRKICPDVATF---NILINVLCAEGSFEKSSYLMQKMEKS---GYAPTIVTY 271
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N +L +C + + K A + M S+ D + N+L+ S + L +M K
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
R P+ VTYN I+ + +G+ +LL EM P T LI G N +
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A ++F + ++ L Y L+ L ++ + + A M V + +TY M
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL ++ ++ L +M++ P T L+ FC+ R + + + G P
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL- 467
+ LI C G + EA + M+ G +F +L L ++G + + +E
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 468 -----DQMIKNLLSVLPPSKGHATGSSNLKV 493
D ++ N +S G+ LK
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKA 602
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 142/338 (42%), Gaps = 13/338 (3%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE---FNVLLKAFCSQ 179
P ++T AM S++ K + D L +G + G +N+LL + +
Sbjct: 757 PDIVTTNAMIDGYSRMGKIEKTNDLLPE---------MGNQNGGPNLTTYNILLHGYSKR 807
Query: 180 RQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
+ + + ++ ++ + PD + + L+LG ES + + RG D T+
Sbjct: 808 KDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
N+ I C G L++ M +T ++ ++R + +E+
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 927
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ + ++ Y LI L R DI++A + +EMI ++ V M L + +
Sbjct: 928 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADE 987
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
+ L + M + VP + LM C+N + +L L + G + ++LIT
Sbjct: 988 ATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLIT 1047
Query: 419 GLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLL 456
GLC++G + AFE ++M G +A ++ L R LL
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 2/215 (0%)
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTS 218
+G D + ++ + +E+R V +M + SP+++ L+ G GD+ +
Sbjct: 893 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 952
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ EM+ P NV + + K G+ + LL M + K VPTI + TTL+H
Sbjct: 953 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
N +A +L + + L +D YN LIT L D+ A L +EM
Sbjct: 1013 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1072
Query: 339 DGVTYHTMFLGLM-RSTGIEGVSELYQKMAQRNFV 372
+ TY + GL+ R T G + + + R F+
Sbjct: 1073 NATTYKALIRGLLARETAFSGADIILKDLLARGFI 1107
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 170/397 (42%), Gaps = 10/397 (2%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAM 131
K LE FN + H + PS + + + L + + + A L E R PSLIT
Sbjct: 197 KGLELFN-RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY--- 252
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+ ++ K + E + RM+ D E FN LLK +++A +V +
Sbjct: 253 NTLIDGYCKAGNPEKSFKVRERMKADHI---EPSLITFNTLLKGLFKAGMVEDAENVLKE 309
Query: 192 MVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M F PD + +IL G+ + + Y V G + T +I ++ CK+G+
Sbjct: 310 MKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGK 369
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
+L + VP T+I G + AR + + + D YN
Sbjct: 370 IEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
LI ++E+A +++M K V TY+ + G R + ++ ++M
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
+P + L+ C+ +L + + + ++G P ++LI G CS+G++ +AF
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
SK+ML++G ++ ++ L L +G + + ++L
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
+++ +I++ + F+ D + ME++ G + L+ C ++ EA+
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDN---GTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 187 SVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
V M R SP + N+L+ G G + F EM+K+G + VTYN ID
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR------ 299
G+ + LL E+ R+ P + T +LI G G N + L+ E+
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 300 -------------------------NLVVDTGVYNALITALLRSKDIESALSLMDEMIEK 334
+L D VYN ++ D+E A +L +MIEK
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 335 RVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLS 394
+ LD TY+++ LG ++ + V L +M R P+ T +++K C+ + +S
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCE-VKDYMS 753
Query: 395 LSLW-NYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+W + EKG+ + L++GL + EA
Sbjct: 754 AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P + S+ +LL ++ + +++ F P Y I K G GL L
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
M+ + P++ LI G + A QLF+E+ +R L+ YN LI +
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ + E + + + M +E +T++T+ GL ++ +E + ++M FVP T
Sbjct: 262 AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT 321
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L + N + + +L ++ V+ G +A+ +L+ LC G++ +A E + +
Sbjct: 322 FSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 438 ERG 440
+G
Sbjct: 382 AKG 384
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 169/401 (42%), Gaps = 50/401 (12%)
Query: 110 KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT--- 166
+A + + ETA + SI+L+ + K E + EE +GRE
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE-------KAEE--ILGREMAKGLV 386
Query: 167 -DE--FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELF 222
+E +N ++ +C + + AR M + PD + N L+ F E G++ + E
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE 446
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
++M +G SP TYNI I Y +K F +L+EME +P + + TLI+
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+A+ + ++ R + +YN LI IE A EM++K +EL+ VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y+T+ GL + + +L +++++ P T L+ + + ++L+ +
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 403 EKGYCPHAHALDLLITGLCSR--------------------------------GQVHEAF 430
G P LLI+ LC++ G + +AF
Sbjct: 627 RSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAF 685
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQM 470
KQM+E+ + ++ L L+ G + +++ L D+M
Sbjct: 686 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 130/307 (42%), Gaps = 2/307 (0%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYH 224
+D +LL +Q + +VF ++ S F P + + DV ++
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFN 203
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
M P YN+ ID CK R D +L +EM R+ +P++ T TLI G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
N K+ ++ + + ++ +N L+ L ++ +E A +++ EM + D T+
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
+F G + E +Y+ T +L+ C+ +++ + + + K
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P+ + +I G C +G + A + M ++G ++ L R + G+++
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 465 -KELDQM 470
KE+++M
Sbjct: 444 EKEVNKM 450
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 2/268 (0%)
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
ES ++ + + G P + + + +D K +F + + + F P+
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
I A + + GK +LFN + + +YN LI L + K + A L D
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
EM+ +R+ +TY+T+ G ++ E ++ ++M + P T L+K +
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
++ + ++ + + G+ P A +L G S + A + ++ G M+A +
Sbjct: 299 MVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCS 358
Query: 450 MLERFLLQSGDIDKLKEL--DQMIKNLL 475
+L L + G I+K +E+ +M K L+
Sbjct: 359 ILLNALCKEGKIEKAEEILGREMAKGLV 386
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
LL + C++ ++ +FG+M PD N +L + GD+ +M+++
Sbjct: 639 LLISLCTKEGIELTERLFGEM--SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSI 696
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
D TYN I K G+ + L++EM R+ P +T ++ G V++ A
Sbjct: 697 GLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYV 756
Query: 292 LFNEIPSRNLVVDTGVYNALITAL---LRSKDIESALSLMD 329
+ E+ + ++D + N L++ L RSK+ E +S M+
Sbjct: 757 WYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 113/249 (45%), Gaps = 15/249 (6%)
Query: 186 RSVFG----------KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR-GFSPD 234
R VFG KM+ + P+ + N +++ F G+ VE + EM + G SP+
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
+YN+ ++ YC +G + ++ EEM+ R V I T+I G KA++LF
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
++ + + Y L+ ++ D++S L + EM K E DG+T + GL
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Query: 355 G----IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
+E + + + F P +L+K C++ ++D +L++ +V KG+ P
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQ 460
Query: 411 HALDLLITG 419
I G
Sbjct: 461 ETYRAFIDG 469
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 28/245 (11%)
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
+ P+ T +M + + + + E +R MEE+V G +NVL++A+C+
Sbjct: 239 GKIKPNATTFNSMMVSFYREGETEMVERI---WREMEEEV--GCSPNVYSYNVLMEAYCA 293
Query: 179 QRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ M EA V+ +M R D + N ++ G + +V + + +M +G +T
Sbjct: 294 RGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLT 353
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG-------------AGIVQ 284
Y ++ YCK G GL + EM+R+ F TI L+ G A IV+
Sbjct: 354 YEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVK 413
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A + + PSRN Y L+ L ++ AL++ EM+ K + TY
Sbjct: 414 DAVREAMFY---PSRN------CYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYR 464
Query: 345 TMFLG 349
G
Sbjct: 465 AFIDG 469
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 17/290 (5%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS----RFSPDTKSMNILL---LGFKESGDVTSVEL 221
FN+L+ C+ + AR V + + + P S N +L LG K+ ++
Sbjct: 190 FNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ---YKLIDW 243
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
Y +M++ GF+PD +TYNI + + G+ RLL+EM + F P + T L+H
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGV--YNALITALLRSKDIESALSLMDEMIEKRVELD 339
A L N + R + V+ GV + LI L R+ +E+ MDE ++ D
Sbjct: 304 TGNKPLAALNLLNHM--REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPD 361
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
V Y M G + +E E++++M ++ +P T +++ FC + + +L
Sbjct: 362 VVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLK 421
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
+ +G P+ L+ L + G+V EA E K M+E+G ++ S L
Sbjct: 422 EMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 119/270 (44%), Gaps = 14/270 (5%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P K N +L + + + Y +M + GF P+ TYN+ + CK + +L
Sbjct: 144 PSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 258 LEEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
L EM + P + TT+I G+V+ + + F + S VYNALI
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVS--------VYNALING 255
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
L + D + A LM EM+EK + + ++Y T+ L S IE +M +R P
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 375 TRTVVMLMK-YFCQNFRLDLSLSLWNYLVEK-GYCPHAHALDLLITGLCSRGQVHEAFEC 432
T+ L+K F + D +L LWN ++ G P+ A + L+ G CS G + +A
Sbjct: 316 IYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSV 374
Query: 433 SKQMLERGRHMSAASFLMLERFLLQSGDID 462
M E G + ++ L + G +D
Sbjct: 375 FSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 134/340 (39%), Gaps = 39/340 (11%)
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEF-------NVLLKAFCSQRQMKEARSVFGKM- 192
Y DTL G R++ V R+ D F NVLLKA C ++ A+ + +M
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMS 208
Query: 193 ------------------------------VSRFSPDTKSMNILLLGFKESGDVTSVELF 222
RF P N L+ G + D
Sbjct: 209 NKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFEL 268
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
EMV++G SP+ ++Y+ I+ C G+ L +M +R P I T+++L+ G +
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 283 VQNAGKARQLFNE-IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
A L+N+ I L + YN L+ +I A+S+ M E +
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
TY ++ G + ++G ++ KM P +++ C++ + + SL +
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIM 448
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
++ P + I GLC G++ A + +QM ++ R
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHR 488
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 122/306 (39%), Gaps = 38/306 (12%)
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
D F M E V G ++ L+ C+ Q++ A S +M+ R P+ +++
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Query: 205 ILLLGFKESGDVTSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
L+ G G +++M++ G P+ V YN + +C G + + ME
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEE 380
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
P I T +LI+G + A ++N++ + + VY ++ AL R +
Sbjct: 381 IGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKE 440
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A SL+ + M++ N P T +K
Sbjct: 441 AESLI-----------------------------------EIMSKENCAPSVPTFNAFIK 465
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
C RLD + ++ + ++ C P+ + L+ GL ++ EA+ ++++ RG
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 443 MSAASF 448
S++++
Sbjct: 526 WSSSTY 531
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
+++A C + KEA S+ M +P + N + G ++G + E + +M ++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 231 FSPDN-VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
P N VTYN +D K R + L E+ R + T TL+HG+ G A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD--EMIEKRVELDGVTYHTMF 347
QL ++ D N +I A + E A ++D ++ D ++Y +
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
GL RS E L ++M VP T +L+ F
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 86 SQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFE 145
+ S P+ +F L R+ + +K + +++ R P+++T + L +AK E
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNEL---LDGLAKANRIE 510
Query: 146 DTLDGFRRMEEDVFV-GREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSM 203
+ G R ++F+ G E+ + +N LL C+ A + GKM V SPD +M
Sbjct: 511 EAY-GLTR---EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITM 566
Query: 204 NILLLGFKESGDVTSVE--LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
N+++L + + G L +R + PD ++Y I C+ DG+ LLE M
Sbjct: 567 NMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERM 626
Query: 262 ERRKFVPTIETITTLIH 278
VP+I T + LI+
Sbjct: 627 ISAGIVPSIATWSVLIN 643
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 110/273 (40%), Gaps = 31/273 (11%)
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
F +T+ + I G+ LL++M+ + F + + ++I V A +A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
++F I +YN ++ LL I+ + +M E + TY+ + L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ----------NFRLDLSLSLWNY 400
++ ++G +L +M+ + P + ++ C+ R + +S++N
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNA 251
Query: 401 L--------------------VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L VEKG P+ + LI LC+ GQ+ AF QML+RG
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 441 RHMSAASFLMLER-FLLQSGDIDKLKELDQMIK 472
H + + L + L+ D L +QMI+
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 14/270 (5%)
Query: 83 LHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQ 142
L SPP ++ L L + + + + E L + +I++ + +
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 143 SFEDTLD-----GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-F 196
+ + + G + D F+ +N ++K FC+ + EA V+ KM
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFL--------YNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
PD + N L+ G ++G V ++ MV G+ PD TY ++ C+KG L
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
LLEEME R P T TL+HG + K +L+ + S + +++ Y L+ +L+
Sbjct: 357 LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLV 416
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+S + A + D ++ + D Y T+
Sbjct: 417 KSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 2/288 (0%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVK 228
++ +++ C ++ EA+ + ++ + SP DT + N LL + D+ V F EM
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 229 R-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
PD V++ I ID C + + L+ ++ F P T++ G +
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A ++ ++ + D YN LI L ++ +E A + M++ E D TY ++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G+ R G L ++M R P T L+ C+ +D + L+ + G
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
++ L+ L G+V EA+E ++ A+++ LE L
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL 450
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 128/308 (41%), Gaps = 6/308 (1%)
Query: 165 GTDEFNVLLKAFC--SQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVEL 221
G F +LL C + V MV+ PD + +I + E+G V +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF--VPTIETITTLIHG 279
E+ ++ PD TYN + CK ++EM R F P + + T LI
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDN 239
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+N +A L +++ + D +YN ++ A+ + +M E+ VE D
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
+TY+T+ GL ++ +E + M + P T T LM C+ +LSL
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+ +G P+ + L+ GLC + + E + M G + + + L R L++SG
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSG 419
Query: 460 DIDKLKEL 467
+ + E+
Sbjct: 420 KVAEAYEV 427
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 196 FSPDTKSMNILLLGFKESGD--VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
F P + ILL + D +++V + MV G PD VT +I + + C+ GR +
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR-NLVVDTGVYNALI 312
L++E+ + P T L+ ++ + +E+ ++ D + LI
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR-STGIEGVSELYQKMAQRNF 371
+ SK++ A+ L+ ++ + D Y+T+ G S G E V +Y+KM +
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG-VYKKMKEEGV 296
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P T L+ + R++ + +V+ GY P L+ G+C +G+ A
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALS 356
Query: 432 CSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGHAT 486
++M RG + ++ L L ++ +DK EL +M+K+ V S G+AT
Sbjct: 357 LLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS-SGVKLESNGYAT 410
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 150/366 (40%), Gaps = 71/366 (19%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L+K C ++ EA ++G+++ R P + + L+ GF + G++ S Y +M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 228 KRGFSPDNVTY-----------------------------------NIRIDTYCKKGRFG 252
K G+ PD V Y N ID +C+ RF
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGA-------------------GIVQNA------- 286
+ L++ M P + T TT++ + G+ +A
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 287 ---------GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
QLF+ + + D V N +I L + IE A + +IE ++E
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D VTY+TM G ++ +++ + F P T T+ +L+ C+N +D ++ +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRM 693
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQ 457
++ + EKG P+A L+ + +F+ ++M E+G S S+ ++ L +
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 458 SGDIDK 463
G +D+
Sbjct: 754 RGRVDE 759
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 36/308 (11%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L+ +C + EA VF M + PD + ++ G + + M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K G PD + Y ID +CK + GL+L + M+R K I +IH
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITA--------------------------------- 314
A + FN + + D YN +I
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678
Query: 315 --LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
L ++ D++ A+ + M EK + + VTY + +S IEG +L+++M ++
Sbjct: 679 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 738
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P + +++ C+ R+D + ++++ ++ P A +LI G C G++ EA
Sbjct: 739 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 798
Query: 433 SKQMLERG 440
+ ML G
Sbjct: 799 YEHMLRNG 806
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 103/219 (47%)
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G +P+ VT+ I+ +CK+G L + ME+R P + +TLI G G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+LF++ + + +D V+++ I ++S D+ +A + M+ + + + VTY + G
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
L + I +Y ++ +R P T L+ FC+ L +L+ +++ GY P
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
+L+ GL +G + A S +ML + ++ F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 8/264 (3%)
Query: 153 RMEEDVFV-------GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMN 204
R+EE +F+ G E + L+ AFC + +F M ++ S D N
Sbjct: 546 RLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 605
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
+++ + + F++ +++ PD VTYN I YC R + R+ E ++
Sbjct: 606 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 665
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
F P T+T LIH + A ++F+ + + + Y L+ +S DIE +
Sbjct: 666 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 725
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
L +EM EK + V+Y + GL + ++ + ++ + +P +L++
Sbjct: 726 FKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCP 408
+C+ RL + L+ +++ G P
Sbjct: 786 YCKVGRLVEAALLYEHMLRNGVKP 809
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 116/289 (40%), Gaps = 36/289 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGF----------------- 210
F L+ FC + +M A +F M R PD + + L+ G+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 211 ------------------KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
+SGD+ + + Y M+ +G SP+ VTY I I C+ GR
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ + ++ +R P+I T ++LI G N L+ ++ D +Y L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
L + + A+ +M+ + + L+ V ++++ G R + ++++ M
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
P T +M+ RL+ +L L+ + + G P A A LI C
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFC 577
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 9/238 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F+ + + + A V+ +M+ + SP+ + IL+ G + G + Y +++
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
KRG P VTY+ ID +CK G G L E+M + + P + L+ G
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A + ++ +++ ++ V+N+LI R + AL + M ++ D T+ T
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTT-- 536
Query: 348 LGLMRSTGIEGVSE----LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+MR + +EG E L+ +M + P L+ FC++ + + L L++ +
Sbjct: 537 --VMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 11/197 (5%)
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKS 202
F + ++G +ME D+ +N ++ +CS R++ EA +F + V+ F P+T +
Sbjct: 624 FNNLIEG--KMEPDIVT--------YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
+ IL+ ++ D+ + M ++G P+ VTY +D + K +L EEM+
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 263 RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIE 322
+ P+I + + +I G +A +F++ L+ D Y LI + +
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 323 SALSLMDEMIEKRVELD 339
A L + M+ V+ D
Sbjct: 794 EAALLYEHMLRNGVKPD 810
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 14/219 (6%)
Query: 66 FASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHP 123
F H L+ F+ + S V + +H+L + + A + P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVC-NVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 124 SLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFG--TDEFNVLLKAFCSQRQ 181
++T M I Y S LD R+ E + V FG T +L+ C
Sbjct: 635 DIVTYNTM------ICGYCSLR-RLDEAERIFELLKV-TPFGPNTVTLTILIHVLCKNND 686
Query: 182 MKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
M A +F M + S P+ + L+ F +S D+ + EM ++G SP V+Y+I
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
ID CK+GR + + + K +P + LI G
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRG 785
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 150/318 (47%), Gaps = 13/318 (4%)
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
+++ K ++++ F++M++ +G E +N L K + + A+ F KM
Sbjct: 190 VLIESYGKAGIVQESVKIFQKMKD---LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
VS P + N++L GF S + + F+ +M RG SPD+ T+N I+ +C+ +
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+ +L EM+ K P++ + TT+I G V ++F E+ S + + Y+ L
Sbjct: 307 DEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 312 ITALLRSKDIESALSLMDEMIEKRVE-LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
+ L + + A +++ M+ K + D + + + ++ + +E+ + MA N
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLN 426
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC-PHAHALDL-------LITGLCS 422
+ +L++ C+ + ++ L + L+EK H L++ +I LC+
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCN 486
Query: 423 RGQVHEAFECSKQMLERG 440
GQ +A +Q+++RG
Sbjct: 487 NGQTAKAEVLFRQLMKRG 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 123/311 (39%), Gaps = 38/311 (12%)
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELF 222
E +N +++ C+ Q +A +F +++ R D ++N L+ G + G+ S
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEI 530
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
M +RG ++ Y + I +Y KG GD L+ M VP
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVP-------------- 576
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
D+ ++ ++I +L +++A +M MI+K V ++
Sbjct: 577 ---------------------DSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIE--D 613
Query: 343 YHTMFLGLMRSTGIEG-VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+ ++ + + G V E ++ N T + L+ + + +L L ++
Sbjct: 614 NMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEKGKTIAALKLLDFG 673
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
+E+ + D ++ L G+ A+ +++E+G S L + L Q G+
Sbjct: 674 LERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNT 733
Query: 462 DKLKELDQMIK 472
+ L +MIK
Sbjct: 734 KQADVLSRMIK 744
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 95/241 (39%), Gaps = 41/241 (17%)
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR---------------------- 317
AGIVQ + K +F ++ + YN+L +LR
Sbjct: 198 AGIVQESVK---IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPT 254
Query: 318 -------------SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
S +E+AL ++M + + D T++TM G R ++ +L+
Sbjct: 255 RHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFV 314
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
+M P + ++K + R+D L ++ + G P+A L+ GLC G
Sbjct: 315 EMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
Query: 425 QVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSV-LPPSKG 483
++ EA K M+ +H++ + + L+ + +++K + ++ +P G
Sbjct: 375 KMVEAKNILKNMM--AKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 484 H 484
H
Sbjct: 433 H 433
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 37/313 (11%)
Query: 181 QMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
++ A S+ + + PD + NIL+ + G F E K+G P+N++Y
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG-------------------AG 281
I YCK + +LL +M R P I T LIHG G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 282 IVQNAG----------------KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
+ +A A+ LF+E+ RN++ D VY LI +RS D + A
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
+ +EK V++D V ++ M G RS ++ +M + + VP T ++ +
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 386 CQNFRLDLSLSLWNYLVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
+ + ++ ++ Y+ EK C P+ LI G C +G A E K+M R +
Sbjct: 566 VKQQDMATAIKIFRYM-EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 445 AASFLMLERFLLQ 457
++ L R L +
Sbjct: 625 VVTYTTLIRSLAK 637
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 1/216 (0%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L++A+C ++ A + +M R PD + IL+ G SG + +++ RG
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
SPD YN+ + CK GRF L EM R +P TLI G + +AR
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
++F+ + + VD +NA+I RS ++ AL+ M+ M E+ + D TY T+ G
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
++ + ++++ M + P T L+ FC
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 165/413 (39%), Gaps = 81/413 (19%)
Query: 130 AMSIMLSKIAKYQSF---EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
A S L +A+Y+ F ED L R E+V + E + +L A+ + +A
Sbjct: 101 ACSSFLKLLARYRIFNEIEDVLGNLRN--ENVKLTHE----ALSHVLHAYAESGSLSKAV 154
Query: 187 SVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN--------- 235
++ +V + PD + N LL +S + Y EM RG S DN
Sbjct: 155 EIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKG 214
Query: 236 --------------------------VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
V YN I YCK G + + +E++ + F+PT
Sbjct: 215 MCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPT 274
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV-------------------------- 303
+ET T+I+G + + +L +E+ R L V
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIG 334
Query: 304 ---------DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
D YN LI L + E A+ +DE +K + + ++Y + +S
Sbjct: 335 WIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
Query: 355 GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
+ S+L +MA+R P T +L+ + +D ++++ L+++G P A +
Sbjct: 395 EYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYN 454
Query: 415 LLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+L++GLC G+ A +ML+R A + L ++SGD D+ +++
Sbjct: 455 MLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 158/399 (39%), Gaps = 28/399 (7%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDT 147
P+++S+ + + + +D A LL + A P ++T I++ + +D
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY---GILIHGLVVSGHMDDA 434
Query: 148 LDGFRRMEEDVFVGREFGTDE--FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
++ ++ + R D +N+L+ C + A+ +F +M+ R PD
Sbjct: 435 VNMKVKL-----IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L+ GF SGD + V++G D V +N I +C+ G + L + M
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEE 549
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
VP T +T+I G Q+ A ++F + + Y +LI D + A
Sbjct: 550 HLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMA 609
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMR-STGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
EM + + + VTY T+ L + S+ +E ++ M VP T L++
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669
Query: 384 YFCQ--------------NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
F + + + L ++ + G+ HA A + + LC G V A
Sbjct: 670 GFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTA 729
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELD 468
+M+++G SF + G+ + + +D
Sbjct: 730 CMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 176/432 (40%), Gaps = 25/432 (5%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
S L+ ++L RL N LE FN + P + ++ +HIL+R R + +
Sbjct: 69 SDELLNSILRRL---RLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKS 125
Query: 114 LLQE-TARTHPSLITLKAMSIMLSKIAKYQSFEDTL----------DGFRRMEEDVF--- 159
L E A H + L ++ K SF T+ G + VF
Sbjct: 126 YLCELVALNHSGFVVWGE----LVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNM 181
Query: 160 --VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDV 216
GR N LL + + A V+ +M+S SPD + +I++ + SG+V
Sbjct: 182 GNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNV 241
Query: 217 TSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITT 275
+F E G + VTYN I+ Y G R+L M R + T T+
Sbjct: 242 DKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTS 301
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
LI G +A +F + + LV D +Y L+ R+ I A+ + D MIE
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
V + +++ G +S + +++ +M + P T L+ +C+ +D +L
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
L + + +K P ++L+ G G H+ K ML+RG + S L L
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 456 LQSGDIDKLKEL 467
+ GD ++ +L
Sbjct: 482 FKLGDFNEAMKL 493
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 1/296 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ VL+ +C Q+++A V M+ +T N L+ G+ +SG + E + M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
PD+ TYN +D YC+ G + L+L ++M +++ VPT+ T L+ G +
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
L+ + R + D + L+ AL + D A+ L + ++ + + D +T + M
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL + + E+ + P +T L + + L + ++ Y+ KG
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
P + LI+G +++ + ++ RG + A++ L G IDK
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDK 629
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 144/336 (42%), Gaps = 9/336 (2%)
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILL 207
D R + + +G T N L+ +C Q+ EA +F +M PD + N L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G+ +G V +M ++ P +TYNI + Y + G F D L L + M +R
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
+ +TL+ + + +A +L+ + +R L+ DT N +I+ L + + + A +
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM----K 383
+D + R + TY + G + ++ + + M ++ P L+ K
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
Y N DL + L +G P LITG C+ G + +A+ +M+E+G +
Sbjct: 589 YRHLNKVADLVIELR----ARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 444 SAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLP 479
+ + L + ID+ L Q I + +LP
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLP 680
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM-ERRKFVPTIETITTLIHGAGIVQNA 286
K+ P+N+ YN+ I CK G+ D +L ++ +F+P T T LIHG I +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
KA L +E+ + ++ + YNALI L + +++ A L+ ++ +K + + +TY+T+
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFV 372
GL++S + L +KM ++ V
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 159/391 (40%), Gaps = 33/391 (8%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDT 147
P H ++ + R Y D+A L + + P+++T +I+L ++ +F D
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT---YNILLKGYSRIGAFHDV 455
Query: 148 LDGFRRMEEDVFVGREFGTDEFNV--LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
L ++ M + R DE + LL+A EA ++ +++R DT ++N
Sbjct: 456 LSLWKMM-----LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 510
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
+++ G + V + + P TY Y K G + + E MER+
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERK 570
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
PTIE TLI GA ++ K L E+ +R L Y ALIT I+ A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ-----------RNFVP 373
+ EMIEK + L+ + L R I+ L QK+ + F+
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
+ T + + + S+ N +K P+ ++ I GLC G++ +A +
Sbjct: 691 ASATTCLKTQKIAE--------SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Query: 434 KQMLERGRHM-SAASFLMLERFLLQSGDIDK 463
+L R + ++ +L +GDI+K
Sbjct: 743 SDLLSSDRFIPDEYTYTILIHGCAIAGDINK 773
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 141/355 (39%), Gaps = 4/355 (1%)
Query: 87 QSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFED 146
+ P + + ++ R DKA + +ET + + + + +++ A E
Sbjct: 220 EVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEG 279
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNI 205
R M E V R T + L+K +C + M+EA VF + + D +
Sbjct: 280 MTRVLRLMSER-GVSRNVVT--YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
L+ G+ +G + + M++ G + N I+ YCK G+ + ++ M
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P T TL+ G +A +L +++ + +V YN L+ R L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
SL M+++ V D ++ T+ L + +L++ + R + T T+ +++
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 386 CQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
C+ +++ + + + + P L G G + EAF + M +G
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS--RFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+NV + C ++++AR +F ++S RF PD + IL+ G +GD+ EM
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+G P+ VTYN I CK G RLL ++ ++ P T TLI G N
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNV 841
Query: 287 GKARQLFNEIPSRNLV 302
+A +L ++ + LV
Sbjct: 842 AEAMRLKEKMIEKGLV 857
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 33/319 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ R + + + ++ +R +P + L+ G+ G + EM+
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 228 KRGFSPDNVTYNIRIDTYCKK--------GRFGDGLRLLEEM-ERRKFVPTIETITTLIH 278
++G +T N+ I C K + + LL+++ + +P +++ +
Sbjct: 639 EKG-----ITLNVNI---CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLE 690
Query: 279 GAG--IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK-R 335
+ ++ A + N P + LV + VYN I L ++ +E A L +++ R
Sbjct: 691 ASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDR 750
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
D TY + G + I L +MA + +P T L+K C+ +D +
Sbjct: 751 FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQ 810
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
L + L +KG P+A + LI GL G V EA ++M+E+G L R
Sbjct: 811 RLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG----------LVRGS 860
Query: 456 LQSGDIDKLKE--LDQMIK 472
+ GD+D KE LD +K
Sbjct: 861 DKQGDVDIPKEVVLDPEVK 879
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 172 LLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
++ A + EA ++F ++ S P T++ N LL G+ ++G + E EM KRG
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
SPD TY++ ID Y GR+ +L+EME P + L+ G K
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
Q+ E+ S + D YN +I + ++ A++ D M+ + +E D VT++T+
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
+ E+++ M +R +P T +++ + R D L + +G P+
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 411 HALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
L+ G+ ++A EC ++M G S+ + L Q G
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRG 598
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 7/263 (2%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
++++ K+ + + F RM + G E +N L+ C + A +F
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSE---GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEA 504
Query: 192 MVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M R P + NI++ + + ++ +M +G P+ VT+ +D Y K GR
Sbjct: 505 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
F D + LEEM+ P+ LI+ + +A F + S L N+
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 311 LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
LI A + A +++ M E V+ D VTY T+ L+R + V +Y++M
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 371 FVPQTRTVVML---MKYFCQNFR 390
P + ML ++Y Q R
Sbjct: 685 CKPDRKARSMLRSALRYMKQTLR 707
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 9/257 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F+ LL F + + ++ V +M S PD + N+++ F + + + M+
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD VT+N ID +CK GR + E MERR +P T +I+ G +
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
++L ++ S+ ++ + + L+ +S A+ ++EM K V L + TM+
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM--KSVGLKPSS--TMY 587
Query: 348 LGLMRSTGIEGVSE----LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
L+ + G+SE ++ M P + L+ F ++ R + ++ Y+ E
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Query: 404 KGYCPHAHALDLLITGL 420
G P L+ L
Sbjct: 648 NGVKPDVVTYTTLMKAL 664
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG--LRLLE 259
+ N L+ + D+ +M + G+ D V Y++ I + + + LRL +
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
E+ER K ++ + +I G + KA QL + L T ++I+AL S
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
A +L +E+ + ++ Y+ + G +++ ++ + +M +R P T
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
+L+ + R + + + + P++ L+ G RG+ + F+ K+M
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 440 G 440
G
Sbjct: 439 G 439
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 12/395 (3%)
Query: 91 SHVSFEMTLHILTRMRYFD--KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTL 148
SH+ + L + D K + ++ + P+ ++ SI++ + + E+
Sbjct: 230 SHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVS---YSILIHGLCEVGRLEEAF 286
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILL 207
+M E G + T + VL+KA C + + +A ++F +M+ R P+ + +L+
Sbjct: 287 GLKDQMGEK---GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLI 343
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G G + +MVK P +TYN I+ YCK GR LL ME+R
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P + T L+ G V KA L + L D YN LI L R + +A L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
+ M +E D +T+ + + + S M ++ T L+ C+
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
+ +L + LV+ H+L++++ L +V E ++ + G S +
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 448 FLMLERFLLQSGDID---KLKELDQMIKNLLSVLP 479
+ L L++SGDI ++ EL ++ L +V P
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 144/332 (43%), Gaps = 13/332 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L++ C + +A + +M+ SPD S N+L+ G G + + M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
PD +T+ I+ +CK+G+ L M R+ T TTLI G V
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A + + ++ N ++ L + ++ L+++ ++ + + VTY T+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
GL+RS I G + + M +P +++ CQ R++ + L + + + G
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDK--- 463
P+ +++ G + G++ A E + M+ERG ++ + +L+ F+L ID
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 464 -------LKELD-QMIKNLLSVLPPSKGHATG 487
L+E D + I L+SV+ G +G
Sbjct: 709 STVSDIALRETDPECINELISVVEQLGGCISG 740
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 132/319 (41%), Gaps = 40/319 (12%)
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLG 209
+RRME D FV G ++ ++ A C + A K++ F D+ LLLG
Sbjct: 183 YRRMEADGFV---VGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239
Query: 210 FKESGDVTSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
F ++ + M K +P++V+Y+I I C+ GR + L ++M + P
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ T Y LI AL I+ A +L
Sbjct: 300 STRT-----------------------------------YTVLIKALCDRGLIDKAFNLF 324
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
DEMI + + + TY + GL R IE + + +KM + P T L+ +C++
Sbjct: 325 DEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKD 384
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
R+ + L + ++ P+ + L+ GLC G+ ++A K+ML+ G S+
Sbjct: 385 GRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Query: 449 LMLERFLLQSGDIDKLKEL 467
+L L + G ++ +L
Sbjct: 445 NVLIDGLCREGHMNTAYKL 463
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 164/418 (39%), Gaps = 35/418 (8%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAM 131
KA+ L + SP VS+ + + L R + + A+ LL P +T A+
Sbjct: 424 KAVHLLKRMLDNGLSP-DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAI 482
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN--VLLKAFCSQRQMKEARSVF 189
K Q D F + + + DE L+ C + ++A +
Sbjct: 483 INAFCK----QGKADVASAFLGL----MLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 190 GKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
+V R S+N++L + V ++ K G P VTY +D +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
G R+LE M+ +P + T +I+G +A +L + + + + Y
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL------------------ 350
++ + + ++ AL + M+E+ EL+ Y ++ G
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 351 -MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
+R T E ++EL + Q + + L+ C+ R D S L ++E+G
Sbjct: 715 ALRETDPECINELISVVEQLGGCI-SGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
A+D+++ CS+ + + E +L+ G S SF ++ + L + GD ++ +EL
Sbjct: 774 -KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERAREL 830
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 147/376 (39%), Gaps = 55/376 (14%)
Query: 107 YFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDV-FVGRE 163
YFDK W LL P ++ A ++ + K+ K GF + V F +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIV---AFTVFIDKLCK--------AGFLKEATSVLFKLKL 334
Query: 164 FGTDE----FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSV 219
FG + + ++ FC + +EA + R P+ + L +GD+
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--RLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+ E+ + G PD V Y ID YC GR + + + P++ T T LI
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+ A +F + + L +D YN L+ ++ + L+DEM + D
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT------------------------ 375
TY+ + ++ I+ +E+ ++ +R FVP T
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 376 -----------RTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
T L+ +C+ R++ ++ L+N L++ G P + LI G CS G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 425 QVHEAFECSKQMLERG 440
+ +A E M++RG
Sbjct: 633 DIEKACELIGLMVQRG 648
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
PSL T +I++ +++ S D FR M+ + G + +N L+ + Q+
Sbjct: 441 PSLTT---STILIGACSRFGSISDAESVFRNMKTE---GLKLDVVTYNNLMHGYGKTHQL 494
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
+ + +M S SPD + NIL+ G + E+++RGF P + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
I + K+G F + L M + P + T + L+HG Q KA LFN++ L
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
D +YN LI DIE A L+ M+++ + + T+H + LGL
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 1/253 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLG-FKESGDVTSVELFYHEMV 227
+ ++ +C+ + +A FG ++ +P + + + +L+G G ++ E + M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G D VTYN + Y K + L++EM P + T LIH +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A ++ +E+ R V T + +I + D + A L M + R++ D VT +
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G ++ +E L+ K+ P L+ +C ++ + L +V++G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 408 PHAHALDLLITGL 420
P+ L+ GL
Sbjct: 651 PNESTHHALVLGL 663
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N+L+ + + + EA + +++ R F P T + ++ GF + GD + + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
PD VT + + YCK R + L ++ P + TLIHG V +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES---ALSLMDEMIEKRVEL 338
KA +L + R ++ + ++AL+ L + + S A L++E+I + L
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHL 689
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 147/376 (39%), Gaps = 55/376 (14%)
Query: 107 YFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDV-FVGRE 163
YFDK W LL P ++ A ++ + K+ K GF + V F +
Sbjct: 286 YFDKGWELLMGMKHYGIRPDIV---AFTVFIDKLCK--------AGFLKEATSVLFKLKL 334
Query: 164 FGTDE----FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSV 219
FG + + ++ FC + +EA + R P+ + L +GD+
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--RLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+ E+ + G PD V Y ID YC GR + + + P++ T T LI
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+ A +F + + L +D YN L+ ++ + L+DEM + D
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT------------------------ 375
TY+ + ++ I+ +E+ ++ +R FVP T
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 376 -----------RTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
T L+ +C+ R++ ++ L+N L++ G P + LI G CS G
Sbjct: 573 YMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Query: 425 QVHEAFECSKQMLERG 440
+ +A E M++RG
Sbjct: 633 DIEKACELIGLMVQRG 648
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
PSL T +I++ +++ S D FR M+ + G + +N L+ + Q+
Sbjct: 441 PSLTT---STILIGACSRFGSISDAESVFRNMKTE---GLKLDVVTYNNLMHGYGKTHQL 494
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
+ + +M S SPD + NIL+ G + E+++RGF P + +
Sbjct: 495 NKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDV 554
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
I + K+G F + L M + P + T + L+HG Q KA LFN++ L
Sbjct: 555 IGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGL 614
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
D +YN LI DIE A L+ M+++ + + T+H + LGL
Sbjct: 615 KPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 106/253 (41%), Gaps = 1/253 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLG-FKESGDVTSVELFYHEMV 227
+ ++ +C+ + +A FG ++ +P + + + +L+G G ++ E + M
Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G D VTYN + Y K + L++EM P + T LIH +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A ++ +E+ R V T + +I + D + A L M + R++ D VT +
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G ++ +E L+ K+ P L+ +C ++ + L +V++G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 408 PHAHALDLLITGL 420
P+ L+ GL
Sbjct: 651 PNESTHHALVLGL 663
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N+L+ + + + EA + +++ R F P T + ++ GF + GD + + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
PD VT + + YCK R + L ++ P + TLIHG V +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES---ALSLMDEMIEKRVEL 338
KA +L + R ++ + ++AL+ L + + S A L++E+I + L
Sbjct: 636 KACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKWHL 689
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 162/354 (45%), Gaps = 50/354 (14%)
Query: 126 ITLKAMSIMLSKIAKYQSFEDT----LDGFR-RMEEDVFVGREFGTDEFNVLLKAFCSQR 180
I+ K ++I ++ + K+++ E +DG R + DV +N L+K +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVIT--------YNTLIKGYTRFI 62
Query: 181 QMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYN 239
+ EA +V +M + PD + N L+ G ++ + V + EM+ G SPD +YN
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
+ Y K GR G+ ++L E IH AG+V
Sbjct: 123 TLMSCYFKLGRHGEAFKILHED---------------IHLAGLVPG-------------- 153
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
+DT YN L+ AL +S ++A+ L + + RV+ + +TY+ + GL +S + V
Sbjct: 154 ---IDT--YNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+ +++ + + P T ++K + + R++ L L+ + ++GY A +++
Sbjct: 208 DWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSA 267
Query: 420 LCSRGQVHEAFECSKQMLERG-RHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
L G+ EA+EC +++ G R S+ L + G++D + +L + I+
Sbjct: 268 LIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIE 321
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 147/348 (42%), Gaps = 45/348 (12%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWML--------LQETARTHPSLITLKAMSIMLSKIAKY 141
P +++ + TR D+A+ + ++ T+ SLI+ A ++ML+++
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV--L 103
Query: 142 QSFEDTL-------------------------DGFRRMEEDV-FVGREFGTDEFNVLLKA 175
Q F++ L + F+ + ED+ G G D +N+LL A
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 176 FCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
C A +F + SR P+ + NIL+ G +S V SV+ E+ K G++P+
Sbjct: 164 LCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNA 223
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV----PTIETITTLIHGAGIVQNAGKARQ 291
VTY + Y K R GL+L +M++ + ++ LI A +A +
Sbjct: 224 VTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK----TGRAEEAYE 279
Query: 292 LFNE-IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+E + S D YN L+ + ++++ L++E+ K ++ D T+ + GL
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGL 339
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ G + + + P T L+ C+ +D ++ L+
Sbjct: 340 LNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 9/261 (3%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE-TARTHPSLITLKAMS 132
+A + + +H + P ++ + L L + + D A L + +R P L+T +
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTY---N 192
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
I+++ + K + R +++ + + +LK + +++++ +F KM
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAV---TYTTMLKMYFKTKRIEKGLQLFLKM 249
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF-SPDNVTYNIRIDTYCKKGR 250
++ D + ++ ++G HE+V+ G S D V+YN ++ Y K G
Sbjct: 250 KKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN 309
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA 310
LLEE+E + P T T +++G + N G A + I + N
Sbjct: 310 LDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNC 369
Query: 311 LITALLRSKDIESALSLMDEM 331
LI L ++ ++ A+ L M
Sbjct: 370 LIDGLCKAGHVDRAMRLFASM 390
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 165/399 (41%), Gaps = 21/399 (5%)
Query: 70 SNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLK 129
+G K L+ + S P+ V + LH L + +A L+ E P+ +T
Sbjct: 199 GDGFKLLQI----MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK--EPNDVTFN 252
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV--LLKAFCSQRQMKEARS 187
+ I+ Y + + + +E+ +G F D V +++ C++ ++ EA
Sbjct: 253 IL------ISAYCNEQKLIQSMVLLEKCFSLG--FVPDVVTVTKVMEVLCNEGRVSEALE 304
Query: 188 VFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
V ++ S+ D + N L+ G+ G + + F+ EM ++G+ P+ TYN+ I YC
Sbjct: 305 VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
G L +M+ T TLI G I ++ + + V
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGAR 424
Query: 307 V--YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
+ YN +I + E AL + +M +++ V + L G++ + Y
Sbjct: 425 IDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
+M VP L+ + Q+ +++ SL L N +V +GY P + + +I G C +
Sbjct: 483 QMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 425 QVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+V + + M ERG S+ L L GDI K
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 10/306 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMN-ILLLGFKESGDVTSVELFYHE 225
F +++ F R +K SV +VS+F P K N IL + KE D+ E F +
Sbjct: 115 FVTIIRGFGRARLIKRVISVV-DLVSKFGIKPSLKVFNSILDVLVKEDIDIAR-EFFTRK 172
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M+ G D TY I + R GDG +LL+ M+ P TL+H
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
G+AR L +E+ N V +N LI+A + + ++ L+++ D VT
Sbjct: 233 VGRARSLMSEMKEPNDV----TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ L + E+ +++ + L+K +C ++ ++ + + KG
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-L 464
Y P+ +LLI G C G + A + M + A+F L R L G D L
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGL 408
Query: 465 KELDQM 470
K L+ M
Sbjct: 409 KILEMM 414
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 114 LLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF---VGREFGTDEFN 170
++Q++ H + I + ++ K +ED L+ +ME+ +F V R F
Sbjct: 413 MMQDSDTVHGARI--DPYNCVIYGFYKENRWEDALEFLLKMEK-LFPRAVDRSFK----- 464
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
L + C + M + ++ + +M+ P + L+ + + G + ++MV R
Sbjct: 465 --LISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR 522
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G+ P + T+N I +CK+ + +G++ +E+M R VP E+ L+ + + KA
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKA 582
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
LF+ + +++V D ++++L+ L + I SL D
Sbjct: 583 WLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQD 622
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 162/385 (42%), Gaps = 46/385 (11%)
Query: 82 TLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITL-KAMSIMLSKI 138
+L P+ V+F + + + ++ +LL++ P ++T+ K M ++ ++
Sbjct: 238 SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE- 296
Query: 139 AKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FS 197
+ L+ R+E G + N L+K +C+ +M+ A+ F +M + +
Sbjct: 297 ---GRVSEALEVLERVESK---GGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL 350
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+ ++ N+L+ G+ + G + S +++M + T+N I GR DGL++
Sbjct: 351 PNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKI 410
Query: 258 LEEMERRKFV--PTIETITTLIHG-------AGIVQNAGKARQLFNEIPSRN-------- 300
LE M+ V I+ +I+G ++ K +LF R+
Sbjct: 411 LEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCE 470
Query: 301 -------------LVVDTGVYNALITALL-----RSKDIESALSLMDEMIEKRVELDGVT 342
++ + GV + +++ L + IE +L L+++M+ + T
Sbjct: 471 KGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSST 530
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
++ + +G + + + + MA+R VP T + L++ C + + L++ +V
Sbjct: 531 FNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMV 590
Query: 403 EKGYCPHAHALDLLITGLCSRGQVH 427
EK P L+ L + +H
Sbjct: 591 EKSIVPDPSMWSSLMFCLSQKTAIH 615
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 13/295 (4%)
Query: 198 PDTKSMNILLLGF-KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
P S+N+L+ + G V + + EM KRG PD+ TY I C+ GR + +
Sbjct: 154 PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKK 213
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L EM + PT+ T T+LI+G +N +A + E+ S+ + + Y++L+ L
Sbjct: 214 LFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLC 273
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
+ A+ L + M+ + + VTY T+ GL + I+ EL +M + P
Sbjct: 274 KDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAG 333
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP-------HAHALDLLITGLCSRGQVHEA 429
++ FC + + + + ++ G P H + ++ GLC+ A
Sbjct: 334 LYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRA 392
Query: 430 FECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMIKNLLSVLPPSKG 483
F M RG + + L + L + G+ K +L D+++ + PSKG
Sbjct: 393 FTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD---GCIPSKG 444
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKK-GRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
FY M + G P + N+ I C+ G GL++ EM +R P T TLI G
Sbjct: 143 FYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGL 202
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+A++LF E+ ++ Y +LI L SK+++ A+ ++EM K +E +
Sbjct: 203 CRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNV 262
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
TY ++ GL + EL++ M R P T L+ C+ ++ ++ L +
Sbjct: 263 FTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDR 322
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+ +G P A +I+G C+ + EA
Sbjct: 323 MNLQGLKPDAGLYGKVISGFCAISKFREA 351
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 113/273 (41%), Gaps = 17/273 (6%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C ++ EA+ +F +MV + +P + L+ G S +V + EM
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+G P+ TY+ +D CK GR + L E M R P + T TTLI G Q
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A +L + + + L D G+Y +I+ A + +DEMI L G+T + +
Sbjct: 315 EAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI-----LGGITPNRLT 369
Query: 348 LGLMRSTGIEGVS-----------ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
+ T E V LY M R + T+ L+K C+ ++
Sbjct: 370 WNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQ 429
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
L + +V G P LLI + V EA
Sbjct: 430 LVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 10/333 (3%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S LV +L R + L L++ H S + ++M + IL + + +D+
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDA---YDMAVDILGKAKKWDRMK 141
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
++ L+TL ++ ++ + A +E+ + F R+ E G E T+ N+L
Sbjct: 142 EFVERM--RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE---FGLEKNTESMNLL 196
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
L C ++++++AR V ++ S +P+ + NI + G+ ++ V EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
P ++Y I YC++ F +L EME P T TT++ + +A ++
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD-EMIEKRVELDGVTYHTMFLGLM 351
+ D+ YN LI L R+ +E A + EM E V ++ TY++M
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 352 RSTGIEGVSELYQKMAQRNFV-PQTRTVVMLMK 383
+ EL ++M N P T L++
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 135/329 (41%), Gaps = 27/329 (8%)
Query: 120 RTHPSLITLKAMSIMLSKIA-KYQSFEDTLDGFRRMEE--DVFVGREFGTDEFNVLLKAF 176
R +PS ++ S + ++ + +TLD + + EE +V VGR+ D + + K
Sbjct: 15 RLNPSSSSIAIFSTFIKNLSTASEQLPETLDEYSQSEEIWNVIVGRDGDRDSEDDVFKRL 74
Query: 177 CSQRQMKEARSVFG---KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
S K G K++ RF D +S + +L + ES +G
Sbjct: 75 SSDEICKRVNLSDGLVHKLLHRFRDDWRSA-LGILKWAESC--------------KGHKH 119
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP--TIETITTLIHGAGIVQNAGKARQ 291
+ Y++ +D K ++ +E M K V T+ I GAG + +A
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWE---EAVG 176
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
+F+ + L +T N L+ L + K +E A ++ ++ + + + T++ G
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWC 235
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
++ +E Q+M F P + +++ +CQ F + + + G P++
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG 440
+++ L ++ + EA + +M G
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSG 324
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 146/333 (43%), Gaps = 10/333 (3%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S LV +L R + L L++ H S + ++M + IL + + +D+
Sbjct: 85 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDA---YDMAVDILGKAKKWDRMK 141
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
++ L+TL ++ ++ + A +E+ + F R+ E G E T+ N+L
Sbjct: 142 EFVERM--RGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE---FGLEKNTESMNLL 196
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
L C ++++++AR V ++ S +P+ + NI + G+ ++ V EM GF
Sbjct: 197 LDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFR 256
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
P ++Y I YC++ F +L EME P T TT++ + +A ++
Sbjct: 257 PCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRV 316
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD-EMIEKRVELDGVTYHTMFLGLM 351
+ D+ YN LI L R+ +E A + EM E V ++ TY++M
Sbjct: 317 ATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYC 376
Query: 352 RSTGIEGVSELYQKMAQRNFV-PQTRTVVMLMK 383
+ EL ++M N P T L++
Sbjct: 377 HHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 135/329 (41%), Gaps = 27/329 (8%)
Query: 120 RTHPSLITLKAMSIMLSKIA-KYQSFEDTLDGFRRMEE--DVFVGREFGTDEFNVLLKAF 176
R +PS ++ S + ++ + +TLD + + EE +V VGR+ D + + K
Sbjct: 15 RLNPSSSSIAIFSTFIKNLSTASEQLPETLDEYSQSEEIWNVIVGRDGDRDSEDDVFKRL 74
Query: 177 CSQRQMKEARSVFG---KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
S K G K++ RF D +S + +L + ES +G
Sbjct: 75 SSDEICKRVNLSDGLVHKLLHRFRDDWRSA-LGILKWAESC--------------KGHKH 119
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP--TIETITTLIHGAGIVQNAGKARQ 291
+ Y++ +D K ++ +E M K V T+ I GAG + +A
Sbjct: 120 SSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWE---EAVG 176
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
+F+ + L +T N L+ L + K +E A ++ ++ + + + T++ G
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWC 235
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
++ +E Q+M F P + +++ +CQ F + + + G P++
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSI 295
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG 440
+++ L ++ + EA + +M G
Sbjct: 296 TYTTIMSSLNAQKEFEEALRVATRMKRSG 324
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKES 213
E +V VG T FNVL++A+C +++++EA V KM PDT + N + + +
Sbjct: 179 EGNVDVGPNIRT--FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 214 GDVTSVELFYHE--MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
G+ E E ++K P+ T I + YC++GR DGLR + M+ + +
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
+LI+G V + ++ + N+ D Y+ ++ A + +E A + EM
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
++ V+ D Y + G +R+ + EL + + + P ++ +C N +
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSM 415
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
D ++ ++N + + G P+ + L+ G Q +A E + M G ++FL+L
Sbjct: 416 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLL 475
Query: 452 ERFLLQSGDIDK 463
+G D+
Sbjct: 476 AEAWRVAGLTDE 487
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 184 EARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRI 242
EA++VF + + P S LL S+ E+ + G D++ +N I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 243 DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV 302
+ + + G D ++ L +M+ PT T TLI G GI ++ +L + +
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG-N 181
Query: 303 VDTG----VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG-LMRSTGIE 357
VD G +N L+ A + K +E A ++ +M E V D VTY+T+ + + +
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 358 GVSELYQKMAQRNFV-PQTRTVVMLMKYFCQNFRL 391
SE+ +KM + P RT +++ +C+ R+
Sbjct: 242 AESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y L+ A+ K S S++ E+ + +LD + ++ + S +E + KM
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC---PHAHALDLLITGLCSRG 424
+ P T T L+K + + + S L + ++E+G P+ ++L+ C +
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 425 QVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+V EA+E K+M E G ++ + +Q G+
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 131/284 (46%), Gaps = 1/284 (0%)
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
+L+ + + +A V+ +M + P D+ N+++ G SG++ + F +MVKR
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G +PD TYN I CK+G+F + L M+ P + +I G I + +A
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRA 389
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ + +L+ + ++N +I R D SALS+++ M+ V+ + T + + G
Sbjct: 390 NEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG 449
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
++ + + +M P T T +L+ C L L+ L++ ++ +G P
Sbjct: 450 YVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD 509
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLER 453
L+ GLC +G++ +A ++ G + FL+L +
Sbjct: 510 IITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 13/299 (4%)
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEF----NVLLKAFCSQRQMKEARSVFGKMV-SRFSP 198
+ +LD + E V + F D+ + +++ C Q ++ A + KM+ S P
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
+ N LL G ++G + + EM + G SP+ V+YN I C L L
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 259 EEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEI---PSRNLVVDTGVYNALI 312
M + P T ++H G++ N K +L EI N +D + L+
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK--KLLEEILDSSQANAPLDIVICTILM 272
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
+ ++ ++ AL + EM +K V D V Y+ + GL S + M +R
Sbjct: 273 DSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVN 332
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P T L+ C+ + D + L + G P + ++I GLC G V+ A E
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 132/334 (39%), Gaps = 40/334 (11%)
Query: 158 VFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRF-SPDTKSMNILLLGFKESGDV 216
++ G G N LL C +++A + +M SP+ S N L+ G +V
Sbjct: 148 IYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNV 207
Query: 217 TSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG-LRLLEEM--ERRKFVPTIETI 273
++ M K G P+ VT NI + C+KG G+ +LLEE+ + P I
Sbjct: 208 DKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVI 267
Query: 274 TTLIHGAGIVQ-NAGKARQLFNEIPSRNLVVDTGVYNA---------------------- 310
T++ + N +A +++ E+ +N+ D+ VYN
Sbjct: 268 CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMV 327
Query: 311 -------------LITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
LI+AL + + A L M V D ++Y + GL +
Sbjct: 328 KRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLI 417
+E M + + +P+ +++ + + +LS+ N ++ G P+ + + LI
Sbjct: 388 RANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALI 447
Query: 418 TGLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
G G++ +A+ +M H ++ +L
Sbjct: 448 HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLL 481
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 20/268 (7%)
Query: 174 KAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
+ CS + ++A SV +M+ + F PDT + + +L + + L + EM + G
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
D TY I +D++CK G + EM P + T T LIH + A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
F + S + + Y+ALI ++ +E A + + M
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC-------------------G 616
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
S + V +++ + P T L+ FC++ R++ + L + + +G P+
Sbjct: 617 SKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIV 676
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLERG 440
D LI GLC G++ EA E +M E G
Sbjct: 677 YDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 126/307 (41%), Gaps = 23/307 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTK----------------SMNILLLGFK 211
++ L+ C Q+++A +F +M S+ PD + LL GF
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
+S V M G P+ + Y+ ID CK G+ + + EM F T+
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 272 TITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
T ++LI V+ A ++ +++ + + +Y +I L + + A LM M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 332 IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
EK + + VTY M G IE EL ++M + P T +L+ + C+N L
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
D++ +L + + + H +I G ++ F S +L+ A FL +
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF------NKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 452 ERFLLQS 458
R L+ +
Sbjct: 885 YRLLIDN 891
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/441 (19%), Positives = 168/441 (38%), Gaps = 55/441 (12%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSI 133
+A ++FN + P+ V++ +H + + A L ET + L + S
Sbjct: 536 QARKWFN-EMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSA 593
Query: 134 MLSKIAKYQSFEDTLDGFRRM-------EEDVFVGREFGTDE------FNVLLKAFCSQR 180
++ K E F RM + D++ + E + LL FC
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 181 QMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF-------- 231
+++EAR + M + P+ + L+ G + G + + EM + GF
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 232 ---------------------------SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
+P+ V Y ID CK G+ + +L++ ME +
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
P + T T +I G G++ +L + S+ + + Y LI ++ ++ A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
+L++EM + Y + G + IE + L ++ Q + P +L+
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNKEF-IESLG-LLDEIGQDDTAPFLSVYRLLIDN 891
Query: 385 FCQNFRLDLSLSLWNYLV--EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
+ RL+++L L + ++ + LI LC +V AF+ +M ++G
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 443 MSAASFLMLERFLLQSGDIDK 463
SF L + L ++ I +
Sbjct: 952 PEMQSFCSLIKGLFRNSKISE 972
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 9/238 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ ++ C + EA + M + P+ + ++ GF G + + M
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG--IVQN 285
+G +P+ VTY + ID CK G LLEEM++ + +I G +++
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL--DGVTY 343
G L +EI + VY LI L++++ +E AL L++E+ L TY
Sbjct: 867 LG----LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+++ L + +E +L+ +M ++ +P+ ++ L+K +N ++ +L L +++
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 145/397 (36%), Gaps = 80/397 (20%)
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
E+ L R +++VF EF NVL++ C A G++ RF P +
Sbjct: 185 EEFLQQIRDDDKEVF--GEF----LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTY 238
Query: 204 NILLLGFKESGDVTSVELFYHEM-------------------VKRG-------------F 231
N L+ F ++ + S L + EM K G F
Sbjct: 239 NCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENF 298
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
PD V Y I C+ F + + L M +P + T +TL+ G + G+ ++
Sbjct: 299 VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKR 358
Query: 292 LFNEI------PSRNL-----------------------VVDTG------VYNALITALL 316
+ N + PS + +V G VYN LI ++
Sbjct: 359 VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC 418
Query: 317 RSKD------IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN 370
KD ++ A EM+ V L+ + + L + E + ++M +
Sbjct: 419 GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAF 430
F+P T T ++ Y C +++L+ L+ + G + +++ C G + +A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ +M E G + ++ L L++ + EL
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/383 (18%), Positives = 153/383 (39%), Gaps = 18/383 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSL--ITLKAMSIMLSKIAKYQSFEDT 147
PS ++ + + D A ++ +E + + + TL+ + L K+ K++
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR----- 287
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNIL 206
+ +E + FV T + L+ C +EA +M + P+ + + L
Sbjct: 288 -EALTLVETENFVP---DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L G + + + M+ G P +N + YC G +LL++M +
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403
Query: 267 VPTIETITTLIHGAGIVQNA------GKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
+P LI +++ A + ++E+ + +V++ ++ L +
Sbjct: 404 MPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
E A S++ EMI + D TY + L ++ +E L+++M + V T +
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
++ FC+ ++ + +N + E G P+ LI +V A E + ML G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 441 RHMSAASFLMLERFLLQSGDIDK 463
+ ++ L ++G ++K
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEK 606
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 21/270 (7%)
Query: 83 LHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAK 140
L +S +P + EM + L ++ D+A+ L+Q E P+++T AM I K
Sbjct: 736 LENSCAPNVVIYTEM-IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPD- 199
E L+ RM V + T + VL+ C + A ++ +M P
Sbjct: 795 ---IETCLELLERMGSK-GVAPNYVT--YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
T ++ GF + + S+ L E+ + +P Y + ID K R LRLLE
Sbjct: 849 TAGYRKVIEGFNKEF-IESLGLL-DEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 260 EME--RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
E+ V T +LI + A QLF+E+ + ++ + + +LI L R
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966
Query: 318 SKDIESALSLMD-------EMIEKRVELDG 340
+ I AL L+D + IE++ DG
Sbjct: 967 NSKISEALLLLDFISHMEIQWIEEKKTSDG 996
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 134/288 (46%), Gaps = 5/288 (1%)
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
K+ ++++ GF + D + + +MVK G PD + YN I +C G ++ ++E
Sbjct: 520 KTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKE 579
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M++ + PT T +IHG + ++ ++F+ + V +N LI L+ +
Sbjct: 580 MQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ 639
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS-ELYQKMAQRNFVPQTRTVV 379
+E A+ ++DEM V + TY + G S G G + E + ++ T
Sbjct: 640 MEKAVEILDEMTLAGVSANEHTYTKIMQGYA-SVGDTGKAFEYFTRLQNEGLDVDIFTYE 698
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
L+K C++ R+ +L++ + + ++ ++LI G RG V EA + +QM +
Sbjct: 699 ALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Query: 440 GRHMSAASFLMLERFLLQSGDIDKLKE-LDQMIKNLLSVLPPSKGHAT 486
G ++ ++GD+++ + +++M L V P K + T
Sbjct: 759 GVKPDIHTYTSFISACSKAGDMNRATQTIEEM--EALGVKPNIKTYTT 804
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 162/378 (42%), Gaps = 15/378 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAW---MLLQETARTHPSLITLKAMSIMLSKIAKYQSFED 146
P+ V++ +++ T++ KA +++E H LK S+M++ K +D
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH----NLKTYSMMINGFVK---LKD 534
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNI 205
+ F E+ V G + +N ++ AFC M A +M R P T++
Sbjct: 535 WANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMP 594
Query: 206 LLLGFKESGDV-TSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
++ G+ +SGD+ S+E+F +M++R G P T+N I+ +K + + +L+EM
Sbjct: 595 IIHGYAKSGDMRRSLEVF--DMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
T T ++ G V + GKA + F + + L VD Y AL+ A +S ++S
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
AL++ EM + + + Y+ + G R + ++L Q+M + P T +
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
+ ++ + + G P+ LI G +A C ++M G
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 444 SAASFLMLERFLLQSGDI 461
A + L LL I
Sbjct: 833 DKAVYHCLLTSLLSRASI 850
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 123/288 (42%), Gaps = 15/288 (5%)
Query: 66 FASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSL 125
+A + ++LE F+ P H +F ++ L R +KA +L E +L
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVH-TFNGLINGLVEKRQMEKAVEILDEM-----TL 652
Query: 126 ITLKAMSIMLSKIAK-YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
+ A +KI + Y S DT F G + + LLKA C +M+
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 185 ARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A +V +M +R P ++ NIL+ G+ GDV +M K G PD TY I
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
K G + +EEME P I+T TTLI G KA + E+ + +
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 304 DTGVYNALITALLRSKDIESA------LSLMDEMIEKRVELD-GVTYH 344
D VY+ L+T+LL I A +++ EM+E + +D G H
Sbjct: 833 DKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVH 880
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 158/365 (43%), Gaps = 29/365 (7%)
Query: 118 TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFC 177
T+R + SLI A+ + ++ L R+M+E+ G E ++V++ F
Sbjct: 343 TSRIYTSLIHAYAVG---------RDMDEALSCVRKMKEE---GIEMSLVTYSVIVGGF- 389
Query: 178 SQRQMKEARSVFGKMVSRFSPDTKSMNILLLG-----FKESGDVTSVELFYHEMVKRGFS 232
S+ EA + R K++N + G ++ ++ E EM + G
Sbjct: 390 SKAGHAEAADYWFDEAKRIH---KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGID 446
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
Y+ +D Y GL + + ++ F PT+ T LI+ V KA ++
Sbjct: 447 APIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM---FLG 349
+ + + Y+ +I ++ KD +A ++ ++M+++ ++ D + Y+ + F G
Sbjct: 507 SRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCG 566
Query: 350 LMR-STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
+ I+ V E+ QK+ R P TRT + ++ + ++ + SL +++ + G P
Sbjct: 567 MGNMDRAIQTVKEM-QKLRHR---PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVP 622
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELD 468
H + LI GL + Q+ +A E +M G + ++ + + GD K E
Sbjct: 623 TVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYF 682
Query: 469 QMIKN 473
++N
Sbjct: 683 TRLQN 687
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 138/337 (40%), Gaps = 7/337 (2%)
Query: 124 SLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMK 183
SL+T + SK ++ + D +R+ + + ++ A C M+
Sbjct: 378 SLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH------KTLNASIYGKIIYAHCQTCNME 431
Query: 184 EARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRI 242
A ++ +M + ++ G+ D + + + + GF+P VTY I
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLI 491
Query: 243 DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV 302
+ Y K G+ L + M+ ++T + +I+G +++ A +F ++ +
Sbjct: 492 NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 303 VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSEL 362
D +YN +I+A +++ A+ + EM + R T+ + G +S + E+
Sbjct: 552 PDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 363 YQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCS 422
+ M + VP T L+ + +++ ++ + + + G + H ++ G S
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 423 RGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
G +AFE ++ G + ++ L + +SG
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 9/290 (3%)
Query: 152 RRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGF 210
R +E DV V + L+ C + MK A +F ++ + SP + + L+ G
Sbjct: 323 RGIESDVHV--------YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 211 KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTI 270
+ G++ + E+ +EM +G + V +N ID YC+KG + + + ME++ F +
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 271 ETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDE 330
T T+ ++ +A+Q + + + T Y LI + ++E A L E
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 331 MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFR 390
M K V+ + +TY+ M + I+ +L M P + T L+ C
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 391 LDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+D ++ L++ + KG ++ ++I+GL G+ EAF +M +G
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 12/340 (3%)
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
+ L K + + L+ FRRM V G + ++++ C + ++++++ K+
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRM---VDSGVKITVYSLTIVVEGLCRRGEVEKSK----KL 246
Query: 193 VSRFS-----PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
+ FS P+ + N ++ + + D + VE M K G + VTY + ++ K
Sbjct: 247 IKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVK 306
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
G+ D +L +EM R + T+LI N +A LF+E+ + L +
Sbjct: 307 NGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYT 366
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y ALI + + ++ +A LM+EM K V + V ++T+ G R ++ S +Y M
Sbjct: 367 YGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVME 426
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
Q+ F T + F + R D + ++E G + LI C G V
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
EA +M +G +A ++ ++ + G I + ++L
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 12/221 (5%)
Query: 144 FEDTLDGFRR--------MEEDVFVGREFGTDEF--NVLLKAFCSQRQMKEARS-VFGKM 192
F +DG+ R M DV + F D F N + F ++ EA+ +F M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 193 VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
T S L+ + + G+V + + EM +G P+ +TYN+ I YCK+G+
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ +L ME P T T+LIHG I N +A +LF+E+ + L ++ Y +I
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
+ L ++ + A L DEM K +D Y T +G M S
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY-TALIGSMHS 621
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 124/296 (41%), Gaps = 1/296 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L++ +M +A +F +M R D L+ G++ L + E+
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G SP + TY ID CK G G L+ EM+ + T TLI G
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A +++ + + D N + + R K + A + M+E V+L V+Y +
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLI 476
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ +E L+ +M+ + P T +++ +C+ ++ + L + G
Sbjct: 477 DVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMD 536
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
P ++ LI G C V EA +M +G ++ ++ ++ L ++G D+
Sbjct: 537 PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDE 592
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 1/215 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L+ +C + + EA ++ M + F D + N + F + + M+
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G V+Y ID YCK+G + RL EM + P T +I+
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+AR+L + + + D+ Y +LI + +++ A+ L EM K ++ + VTY M
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
GL ++ + LY +M ++ + + L+
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 137/335 (40%), Gaps = 38/335 (11%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+++ + + +E VF MV + S D +S + L+ K+ + + MV
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG--------- 279
G + I ++ C++G +L++E + P T T+I+
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 280 ----------AGIVQNA-------------GK---ARQLFNEIPSRNLVVDTGVYNALIT 313
G+V N GK A +LF+E+ R + D VY +LI+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
R +++ A L DE+ EK + TY + G+ + G G +E+ Q V
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK-VGEMGAAEILMNEMQSKGVN 396
Query: 374 QTRTVV-MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
T+ V L+ +C+ +D + +++ + +KG+ + + + + EA +
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 433 SKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+M+E G +S S+ L + G++++ K L
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 46/274 (16%)
Query: 122 HPSLITLKAMSIMLSKIAKYQSFEDTLDGF--RRMEEDVFVGREFGTDEFNVLLKAFCSQ 179
P IT ++ + S+ +++ + D RR+E+DVF +N LL A C
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF--------SYNTLLDAICKG 387
Query: 180 RQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
QM A + +M V R P+ S + ++ GF ++G + EM G + D V+Y
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 239 NIRIDTYCKKGRFGDGLRLLE-----------------------------------EMER 263
N + Y K GR + L +L EM+R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
+P + T +TLI G +A ++F E S L D +Y+ALI AL ++ + S
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
A+SL+DEM ++ + + VTY+++ RS ++
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 7/317 (2%)
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM--KE 184
T+ A S ++S + E+ + F M+E G +N ++ A C + M K+
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKE---YGLRPNLVTYNAVIDA-CGKGGMEFKQ 322
Query: 185 ARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
F +M + PD + N LL G + + EM R D +YN +D
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
CK G+ +L +M ++ +P + + +T+I G +A LF E+ + +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
D YN L++ + E AL ++ EM ++ D VTY+ + G + + V +++
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
+M + + +P T L+ + + ++ ++ G LI LC
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 424 GQVHEAFECSKQMLERG 440
G V A +M + G
Sbjct: 563 GLVGSAVSLIDEMTKEG 579
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 138/336 (41%), Gaps = 16/336 (4%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFG---KMVSRFSPDTKSMNILLLGFKESGDVTSVEL 221
G+D+ +++ ++ + +A + K R + K + ++ G VT +
Sbjct: 195 GSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR 254
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
+ G+ ++ I Y + G + + + M+ P + T +I G
Sbjct: 255 IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 282 IVQNAG----KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
G + + F+E+ + D +N+L+ R E+A +L DEM +R+E
Sbjct: 315 ---KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D +Y+T+ + + ++ E+ +M + +P + ++ F + R D +L+L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQ 457
+ + G + + L++ G+ EA + ++M G ++ L +
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 458 SGDIDKLKEL------DQMIKNLLSVLPPSKGHATG 487
G D++K++ + ++ NLL+ G++ G
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 1/262 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVF-GKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N L+ ++++A+S F G R P++ S NIL+ GF + D + + EM+
Sbjct: 154 LNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEML 213
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ P VTYN I C+ G LLE+M +++ P T L+ G
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A++L ++ R Y L++ L + I+ A L+ EM ++R++ D V Y+ +
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
L + + +M + P T M++ FC+ D L++ N ++ +C
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHC 393
Query: 408 PHAHALDLLITGLCSRGQVHEA 429
P ++ GL G + A
Sbjct: 394 PTPATFVCMVAGLIKGGNLDHA 415
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 129/307 (42%), Gaps = 12/307 (3%)
Query: 117 ETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAF 176
+ RT SL TL + + ++ K +SF D R V FN+L+K F
Sbjct: 146 DCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSV---------SFNILIKGF 196
Query: 177 CSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
+ + A VF +M+ P + N L+ + D+ + +M+K+ P+
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
VT+ + + C KG + + +L+ +ME R P + L+ G +A+ L E
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGE 316
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ R + D +YN L+ L + A ++ EM K + + TY M G R
Sbjct: 317 MKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIED 376
Query: 356 IE-GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
+ G++ L +A R+ P T V ++ + LD + + + +K + A
Sbjct: 377 FDSGLNVLNAMLASRH-CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQ 435
Query: 415 LLITGLC 421
L++ LC
Sbjct: 436 NLLSDLC 442
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
L KE D +H+ + GF D +Y+ I K F D + + + R +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNF-DAVDQILRLVRYR 110
Query: 266 FVPTIETI-TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
V E++ LI G + KA +F++I S + V N LI L+ + ++E A
Sbjct: 111 NVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
S D + R+ + V+++ + G + E +++ +M + P T L+ +
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
C+N + + SL +++K P+A LL+ GLC +G+ +EA + M RG
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 445 AASFLMLERFLLQSGDIDKLKEL 467
++ +L L + G ID+ K L
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLL 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 144/342 (42%), Gaps = 20/342 (5%)
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRM--------EEDVFVGREFGTDEFNVLLKAFCSQRQ 181
+ S ++ K+AK ++F D +D R+ E +F+G L++ +
Sbjct: 83 SYSSLIYKLAKSRNF-DAVDQILRLVRYRNVRCRESLFMG----------LIQHYGKAGS 131
Query: 182 MKEARSVFGKMVSRFSPDT-KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
+ +A VF K+ S T +S+N L+ ++G++ + F+ P++V++NI
Sbjct: 132 VDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNI 191
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
I + K + ++ +EM + P++ T +LI + GKA+ L ++ +
Sbjct: 192 LIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKR 251
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS 360
+ + + L+ L + A LM +M + + V Y + L + I+
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 361 ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGL 420
L +M +R P +L+ + C R+ + + + KG P+A ++I G
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 421 CSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
C ML + A+F+ + L++ G++D
Sbjct: 372 CRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 114/280 (40%), Gaps = 14/280 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ VSF + + ++ A + E PS++T ++ L + D
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR-------NDD 236
Query: 148 LDGFRRMEEDVFVGR-EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNI 205
+ + + ED+ R F +L+K C + + EA+ + M R P + I
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
L+ + G + +L EM KR PD V YNI ++ C + R + R+L EM+ +
Sbjct: 297 LMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P T +I G +++ + N + + + ++ L++ +++ A
Sbjct: 357 CKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHAC 416
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTG---IEGVSEL 362
+++ M +K + + + L G E +SE+
Sbjct: 417 FVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEV 456
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 117/250 (46%), Gaps = 5/250 (2%)
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
KS N LL + S + + E+ ++ G +PD VTYN I C+KG D L + E
Sbjct: 158 KSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFE 217
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
E+E+ F P + + TL+ + + ++++ + S+NL + YN+ + L R+K
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
AL+L+D M + + D TY+ + +E V + Y +M ++ P T T
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 380 MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
ML+ C+ LD ++ + ++ + ++ L G++ EA Q+++
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEA----TQLVKN 393
Query: 440 GRHMSAASFL 449
G+ S +L
Sbjct: 394 GKLQSYFRYL 403
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 110/239 (46%), Gaps = 3/239 (1%)
Query: 127 TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
T+K+ + +LS + ++ + F+ + E + + + T +N ++KA C + M +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT--YNTMIKALCRKGSMDDIL 213
Query: 187 SVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTY 245
S+F ++ F PD S N LL F + + M + SP+ +YN R+
Sbjct: 214 SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 246 CKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDT 305
+ +F D L L++ M+ P + T LI + N + + +NE+ + L DT
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
Y LI L + D++ A+ + +E I+ ++ Y + LM + I+ ++L +
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 256 RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR-NLVVDTGVYNALITA 314
+L +EM T+++ L+ + +A + F E+P + + D YN +I A
Sbjct: 143 KLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKA 202
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
L R ++ LS+ +E+ + E D ++++T+ R ++ M +N P
Sbjct: 203 LCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
R+ ++ +N + +L+L + + +G P H + LIT + E +C
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 435 QMLERGRHMSAASFLMLERFLLQSGDIDKLKEL-DQMIKNLLSVLP 479
+M E+G ++ ML L + GD+D+ E+ ++ IK+ L P
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRP 368
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Query: 196 FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK-RGFSPDNVTYNIRIDTYCKKGRFGDG 254
S KS+N LL + D + Y EM K G PD TYN I +C+ G
Sbjct: 147 ISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSS 206
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
++ EMER+ P + +I G + + ++ + R + + YN I +
Sbjct: 207 YSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQS 266
Query: 315 LLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQ 374
L + K + A +L+D M+ ++ + VTY + G E +L++ M R P
Sbjct: 267 LCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPD 326
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
+ L+ Y C+ + +LSL +EK + P + L+ GL +V EA E
Sbjct: 327 SECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIG 386
Query: 435 QMLER 439
Q+ E+
Sbjct: 387 QVKEK 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 245 YCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS-RNLVV 303
Y + LR+ ++E+ + T++++ L+ + ++ +A++++ E+P +
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
D YN +I S S+ S++ EM K ++ + ++ M G + V ++
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
M R T + ++ C+ + + +L + ++ G P+ LI G C+
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 424 GQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
EA + K M+ RG + + L +L + GD +
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 165/426 (38%), Gaps = 83/426 (19%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S +V +VL R + +G + FF++ + S+ + L L R + F
Sbjct: 115 LSIDIVADVLNR---GNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMM 171
Query: 113 MLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN 170
+L+ +P L + ++I + + ++ F EE G + T+ FN
Sbjct: 172 DVLKGMVCEGVNPDL---ECLTIAMDSFVRVHYVRRAIELF---EESESFGVKCSTESFN 225
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
LL+ C + + A+SVF K+G
Sbjct: 226 ALLRCLCERSHVSAAKSVFN------------------------------------AKKG 249
Query: 231 FSP-DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
P D+ +YNI I + K G + ++L+EM F P + + LI G G +
Sbjct: 250 NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDS 309
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
++F+ I + V D VYNA+I + ++D + ++ M+++ E + TY + G
Sbjct: 310 VEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSG 369
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC----------------------- 386
L++ + E++++M R +P T V +K C
Sbjct: 370 LIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRIS 429
Query: 387 -QNFRLDLS-----------LSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSK 434
++L L L++W+ + E GY + ++ GLC G + A +
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVME 489
Query: 435 QMLERG 440
+ + +G
Sbjct: 490 EAMRKG 495
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 145/334 (43%), Gaps = 17/334 (5%)
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFK-------- 211
V +E + + V + +F S + R VF + + S KS++ L +G
Sbjct: 67 VSKEDSSSKNQVAIDSFLSAED--KLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVL 124
Query: 212 ESGDVTS---VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
G+++ V F + + G + D +Y++ + ++ F + +L+ M P
Sbjct: 125 NRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNP 184
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+E +T + V +A +LF E S + T +NAL+ L + +A S+
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
+ + + D +Y+ M G + +E + ++ ++M + F P + L++ +
Sbjct: 245 NAK-KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
R++ S+ +++ + KG P A+ + +I S E+ ++ML+ + ++
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 449 LMLERFLLQSGDI-DKLKELDQMIKNLLSVLPPS 481
L L++ + D L+ ++M+ VLP +
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSR--GVLPTT 395
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 156/387 (40%), Gaps = 56/387 (14%)
Query: 69 HSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITL 128
S+ +A+ FF + P+ ++ + LHIL + F A L E +
Sbjct: 90 QSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEV 149
Query: 129 KAMSIMLSKIAKYQ----SFEDTLDGFRRM---EEDVFVGREFGTDEFNVLLKAFCSQRQ 181
+++S + F+ + G+ ++ EE V RE F+V + C+
Sbjct: 150 DVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVT-CNHLL 208
Query: 182 --------MKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
M++ V+ M P+T + NIL F + V+ F +M + GF
Sbjct: 209 NGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFE 268
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD VTYN + +YC++GR + L + M RR+ VP + T T+LI G +A Q
Sbjct: 269 PDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQT 328
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
F+ + R + D YN LI A + ++ + L+ EM+ V D T + G +R
Sbjct: 329 FHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVR 388
Query: 353 STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHA 412
EG + ++ NFV + R RL + +
Sbjct: 389 ----EG-----RLLSAVNFVVELR-------------RLKVDIPF-------------EV 413
Query: 413 LDLLITGLCSRGQVHEAFECSKQMLER 439
D LI LC G+ A K +L+R
Sbjct: 414 CDFLIVSLCQEGKPFAA----KHLLDR 436
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 144/372 (38%), Gaps = 46/372 (12%)
Query: 109 DKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
+ W + R HP+ T ++ + + ++ +D L+ +MEE+ G E
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE---KMEEE---GFEPDL 271
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHE 225
+N L+ ++C + ++KEA ++ M R PD + L+ G + G V +H
Sbjct: 272 VTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHR 331
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG------ 279
MV RG PD ++YN I YCK+G +LL EM VP T ++ G
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Query: 280 -AGIVQNAGKARQLFNEIPSR-----------------------NLVVDTG------VYN 309
V + R+L +IP ++ + G YN
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYN 451
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
LI +L R IE AL L ++ + LD TY + L R L +M
Sbjct: 452 NLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDS 511
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH-E 428
P + L+ +C+ D + L + + + + L+ +C G + +
Sbjct: 512 EVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKK 571
Query: 429 AFECSKQMLERG 440
A E ++M G
Sbjct: 572 ALELQERMQRLG 583
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 153/371 (41%), Gaps = 10/371 (2%)
Query: 59 ENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQET 118
E V L A+ + +L FFN+ + P+ + +E L + ++ W +L++
Sbjct: 78 EFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQM 137
Query: 119 ARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
I+ + + ++ + K + ++ F + + +G + D +N LL A C
Sbjct: 138 KDLSLD-ISGETLCFIIEQYGKNGHVDQAVELFNGVPKT--LGCQQTVDVYNSLLHALCD 194
Query: 179 QRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ A ++ +M+ + PD ++ IL+ G+ +G + + F EM +RGF+P
Sbjct: 195 VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARG 254
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
++ I+ G ++ +M + FVP I+T LI +++
Sbjct: 255 RDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTAC 314
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
L VD Y LI A+ + I+ A L++ +E + Y + G+ R+ +
Sbjct: 315 KLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD 374
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV---EKGYCPHAHALD 414
+ M + P ML+ + + + NYLV E G P + D
Sbjct: 375 DAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKF---VDAANYLVEMTEMGLVPISRCFD 431
Query: 415 LLITGLCSRGQ 425
++ GL + G+
Sbjct: 432 MVTDGLKNGGK 442
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 106/247 (42%), Gaps = 1/247 (0%)
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
S+ F ++P ++ Y + ++ ++L++M+ + ET+ +I
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDT-GVYNALITALLRSKDIESALSLMDEMIEKRV 336
G + +A +LFN +P T VYN+L+ AL K A +L+ MI K +
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
+ D TY + G + ++ E +M++R F P R +L++ L+ +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLL 456
+ + + + G+ P ++LI + G+V E + G + ++ L +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVS 333
Query: 457 QSGDIDK 463
+ G ID+
Sbjct: 334 KIGKIDE 340
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 155/371 (41%), Gaps = 23/371 (6%)
Query: 90 PSHVS--FEMTLHILTRMRYFDKAWML----LQETARTHPSLITL--------KAMSIML 135
PSHVS F + L T + + D W+ + ++ SL+TL + I +
Sbjct: 27 PSHVSSLFSLNLDPQTALSFSD--WISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITI 84
Query: 136 SKIAKYQSFEDTL---DGFRRMEE-DVF-VGREFGTDEFNVLLKAFCSQRQMKEARSVFG 190
I S D L D R M + D F + + +N LL + ++E + ++
Sbjct: 85 LMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYT 144
Query: 191 KMVSRF-SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
+M+ SPD + N L+ G+ + G V + + +++ G PD TY I +C++
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
++ +EM + + T LI+G + +A L ++ N + Y
Sbjct: 205 EVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYT 264
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
LI AL S A++L +M E ++ D Y + ++ S L + M +
Sbjct: 265 VLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+P T L+K FC+ + ++ L + ++E+ P + LI G CS G + A
Sbjct: 325 GLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 430 FECSKQMLERG 440
+ M E G
Sbjct: 384 YRLLSLMEESG 394
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 122/285 (42%), Gaps = 5/285 (1%)
Query: 126 ITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEA 185
+T K + +LS +A++ E+ + M ED+ V + T FN L+ +C + EA
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDL-VSPDIYT--FNTLVNGYCKLGYVVEA 174
Query: 186 RSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDT 244
+ ++ + PD + + G +V + + EM + G + V+Y I
Sbjct: 175 KQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYG 234
Query: 245 YCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVD 304
+ + + L LL +M+ P + T T LI +A LF ++ + D
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
+Y LI + ++ A L++ M+E + + +TY+ + G + + L
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLS 353
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
KM ++N VP T L+ C + LD + L + + E G P+
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 2/211 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTK-SMNILLLGFKESGDVTSVELFYHEMV 227
+ + C ++++ A VF +M + S L+ G E+ + +M
Sbjct: 193 YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMK 252
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
P+ TY + ID C G+ + + L ++M P T LI
Sbjct: 253 DDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLD 312
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A L + L+ + YNALI + K++ A+ L+ +M+E+ + D +TY+T+
Sbjct: 313 EASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLI 371
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
G S ++ L M + VP RTV
Sbjct: 372 AGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 89/248 (35%), Gaps = 38/248 (15%)
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+K +P YN + + + G + RL EM P I T TL++G +
Sbjct: 114 IKYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A+Q + D Y + IT R K++++A + EM + + V+Y +
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
GL + I+ L KM N
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNC----------------------------------- 256
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE 466
CP+ +LI LC GQ EA KQM E G + +L + +D+
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASG 316
Query: 467 -LDQMIKN 473
L+ M++N
Sbjct: 317 LLEHMLEN 324
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 10/330 (3%)
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRME-EDVFVGREFGTDE--F 169
+L + + P ++TL I+++ + K + ++ L+ F +M + G D F
Sbjct: 317 VLKMDEVKIRPDVVTL---GILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHF 373
Query: 170 NVLLKAFCSQRQMKEARSVFGKMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N L+ C ++KEA + +M R +P+ + N L+ G+ +G + + + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ P+ VT N + C+ + +ME+ + T TLIH V N
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
KA + ++ D +Y ALI+ L + + A+ +++++ E LD + Y+ M
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN-ML 552
Query: 348 LGLM-RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+GL E V E+ M + P + T L+ +F ++ + + + E G
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQM 436
P +I CS G++ EA + K M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 128/303 (42%), Gaps = 8/303 (2%)
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
+ + C + A + ++ +P + N LL + D++ + +M +
Sbjct: 266 ISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF----VPTIETI--TTLIHGAGIVQN 285
PD VT I I+T CK R + L + E+M ++ V ++I TLI G V
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 286 AGKARQLFNEIPSRNLVVDTGV-YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A +L + V YN LI R+ +E+A ++ M E ++ + VT +
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ G+ R G+ + M + T + L+ C ++ ++ + ++E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P A LI+GLC + H+A +++ E G + ++ ML + +K+
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKV 565
Query: 465 KEL 467
E+
Sbjct: 566 YEM 568
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C R+ +A V K+ FS D + N+L+ F + + V +M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K G PD++TYN I + K F R++E+M PT+ T +I V
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 288 KARQLFNEIPSRNLV-VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A +LF ++ + V +T +YN LI A + + ALSL +EM K V + TY+ +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
F L T E + +L +M +++ P T+ +LM+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 121/311 (38%), Gaps = 44/311 (14%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-------FSPDTKSMNILLLGFKESGDVTSVE- 220
+L+ C R++ EA VF KM + D+ N L+ G + G + E
Sbjct: 332 LGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEE 391
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
L ++ +P+ VTYN ID YC+ G+ ++ M+ + P + T+ T++ G
Sbjct: 392 LLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG- 450
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ R + A+ +M ++ V+ +
Sbjct: 451 ----------------------------------MCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
VTY T+ + +E Y+KM + P + L+ CQ R ++ +
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
L E G+ A ++LI C + + +E M + G+ + ++ L F + D
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD 596
Query: 461 IDKLKE-LDQM 470
+ ++ ++QM
Sbjct: 597 FESVERMMEQM 607
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 35/334 (10%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAM 131
KALEFF + H + ++ +L + F W L++ +R +++T ++
Sbjct: 109 KALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASI 168
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEE-----DVFVGREFGTDEFNVLLKAFCSQRQMKEAR 186
+ ++ + + ++ L F RM+E DV+ +N ++ A C K+AR
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYA--------YNTIINALCRVGNFKKAR 220
Query: 187 SVFGKMV---SRFSPDTKSMNILLLGFKESGDVTSVE-----------LFYHEMVKRGFS 232
+ +M R+ PDT + IL+ + G T + EM+ RGF
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFV 280
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD VTYN ID CK R G L L E+M+ + VP T + I + A ++
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEM 340
Query: 293 FNEIPS-RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
+ + V + Y LI AL+ ++ A L+ EM+E + TY + +
Sbjct: 341 MRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK-LVCDAL 399
Query: 352 RSTGIEGV--SELYQKMAQRNFVPQTRTVVMLMK 383
S G+ EL+++M R + Q + VM +K
Sbjct: 400 SSEGLASTLDEELHKRM--REGIQQRYSRVMKIK 431
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 23/386 (5%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAK----YQS 143
P+ + L I ++ +KA L +E R P++ T + L K + Y
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 144 FEDTL-DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTK 201
++D L DG + DV F + N+L K +++E +VF +M + R +P
Sbjct: 326 YKDMLRDG---LTPDVV----FLNNLMNILGKV----GRVEELTNVFSEMGMWRCTPTVV 374
Query: 202 SMNILLLG-FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
S N ++ F+ V+ V ++ +M SP TY+I ID YCK R L LLEE
Sbjct: 375 SYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M+ + F P +LI+ G + A +LF E+ V + VY +I +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
+ A+ L +EM + D Y+ + G++++ I + L +KM + + +
Sbjct: 495 LSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNI 554
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
++ F + ++ ++ + G P + L+ G EA ++M ++G
Sbjct: 555 ILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Query: 441 RHMSAASFLMLERFLLQSGDIDKLKE 466
A ++ L G++D K+
Sbjct: 615 FEYDAITY---SSILDAVGNVDHEKD 637
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETI-TTLI 277
++ F +R F D TY I + +G+ R ++E+ R +V + + L+
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELV 169
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI-EKRV 336
G + KA +F + R + YN++I L++ E + EM E
Sbjct: 170 KALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDC 229
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
D +TY + + + L+ +M P + L+ + + +++ +L
Sbjct: 230 FPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L+ + G P + LI GL G+V EA+ K ML G
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQ-RQMKEARSVFGKM 192
++S A + + ++ F++MEED G + +NV+L F + S+ KM
Sbjct: 214 LISAFANSGRYREAVNVFKKMEED---GCKPTLITYNVILNVFGKMGTPWNKITSLVEKM 270
Query: 193 VSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
S +PD + N L+ K + EM GFS D VTYN +D Y K R
Sbjct: 271 KSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRP 330
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+ +++L EM F P+I T +LI +A +L N++ + D Y L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG-IEGVSELYQKMAQRN 370
++ R+ +ESA+S+ +EM + + T++ F+ + + G + +++ ++
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA-FIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 371 FVPQTRTVVMLMKYFCQNFRLDLSLS-LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
P T L+ F QN +D +S ++ + G+ P + LI+ G +A
Sbjct: 450 LSPDIVTWNTLLAVFGQN-GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 430 FECSKQMLERG 440
++ML+ G
Sbjct: 509 MTVYRRMLDAG 519
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ A+ + EA + +M + + PD + LL GF+ +G V S + EM
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G P+ T+N I Y +G+F + +++ +E+ P I T TL+ G
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ +F E+ V + +N LI+A R E A+++ M++ V D TY+T+
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
L R E ++ +M P T L+ + + L SL +
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 408 PHAHALDLLITGLCSRGQ-VHEAFECSKQMLERG 440
P A L L+ +CS+ + EA ++ ERG
Sbjct: 592 PRAVLLKTLVL-VCSKCDLLPEAERAFSELKERG 624
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 14/280 (5%)
Query: 169 FNVLLKAFCSQRQM--KEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
+N L+ C +R +EA VF +M + FS D + N LL + +S +E
Sbjct: 282 YNTLIT--CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
MV GFSP VTYN I Y + G + + L +M + P + T TTL+ G +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG---FER 396
Query: 286 AGK---ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
AGK A +F E+ + + +NA I + + DE+ + D VT
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 343 YHTMFLGLMRSTGIEG-VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
++T+ L + G++ VS ++++M + FVP+ T L+ + + + +++++ +
Sbjct: 457 WNTL-LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
++ G P + ++ L +RG + E E +E GR
Sbjct: 516 LDAGVTPDLSTYNTVLAAL-ARGGMWEQSEKVLAEMEDGR 554
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 125/297 (42%), Gaps = 4/297 (1%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
++S ++ SFE + +RRM D V + T +N +L A +++ V +M
Sbjct: 495 LISAYSRCGSFEQAMTVYRRML-DAGVTPDLST--YNTVLAALARGGMWEQSEKVLAEME 551
Query: 194 -SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
R P+ + LL + ++ + E+ P V + K
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ R E++ R F P I T+ +++ G Q KA + + + R YN+L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
RS D + ++ E++ K ++ D ++Y+T+ R+T + S ++ +M V
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
P T + + + + ++ + Y+++ G P+ + + ++ G C + EA
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 13/301 (4%)
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+F++ L+AF + K+ +S+ D + I++ + G V+S ++ +
Sbjct: 150 KFDLALRAFDWFMKQKDYQSML---------DNSVVAIIISMLGKEGRVSSAANMFNGLQ 200
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA- 286
+ GFS D +Y I + GR+ + + + ++ME PT+ T +++ G +
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
K L ++ S + D YN LIT R + A + +EM D VTY+ +
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNAL 320
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+S + ++ +M F P T L+ + ++ LD ++ L N + EKG
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKE 466
P L++G G+V A ++M G + +F F+ G+ K E
Sbjct: 381 KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF---NAFIKMYGNRGKFTE 437
Query: 467 L 467
+
Sbjct: 438 M 438
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/405 (18%), Positives = 146/405 (36%), Gaps = 45/405 (11%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAM 131
+A+E N + + P ++ L R + A + +E A P++ T A
Sbjct: 367 EAMELKN-QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
M K+ D E G +N LL F E VF +
Sbjct: 426 IKMYGNRGKFTEMMKIFD------EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKE 479
Query: 192 MV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGR 250
M + F P+ ++ N L+ + G Y M+ G +PD TYN + + G
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGM 539
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHG------------------AGIVQNAG----- 287
+ ++L EME + P T +L+H +G+++
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 288 ------------KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
+A + F+E+ R D N++++ R + + A ++D M E+
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
TY+++ RS E+ +++ + P + ++ +C+N R+ +
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS 719
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+++ + G P + I + EA + M++ G
Sbjct: 720 RIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHG 764
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
PS+ T ++ M S+ A + E+ L E + G + +N ++ A+C +M
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEIL------REILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 183 KEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
++A +F +M S PD + N + + M+K G P+ TYN
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 242 IDTYCKKGRFGDGLRLLEEM 261
+D YCK R + +E++
Sbjct: 776 VDGYCKLNRKDEAKLFVEDL 795
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 150/362 (41%), Gaps = 17/362 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAKYQSFEDT 147
P +F ++ + D+A+ + ++ H P ++T + L + K + +
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNIL 206
L G + DV + L++ +C ++++ EA VF M+SR P+ + N L
Sbjct: 267 LSGMLKKATDVHPN----VVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 207 LLGFKESGDVTSVE--LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
+ G E+ ++ L F+PD T+NI I +C G +++ +EM
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVD-------TGVYNALITALLR 317
K P + + LI + +A LFNE+ + +++ YN + L
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCA 442
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ + A + +++++ V+ D +Y T+ G R + EL M +R FVP T
Sbjct: 443 NGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLET 501
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+ + L+ ++ Y P A ++ L R +E+F ML
Sbjct: 502 YELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLML 561
Query: 438 ER 439
E+
Sbjct: 562 EK 563
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 165/396 (41%), Gaps = 53/396 (13%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P+ +T + LS+ +Y +D L G D F FN+L+KA C +
Sbjct: 314 PNAVTYNTLIKGLSEAHRYDEIKDILIG----GNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 183 KEARSVFGKMVS-RFSPDTKSMNIL-------------------------LLGFKE---- 212
A VF +M++ + PD+ S ++L LLG E
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 213 -------------SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
+G E + +++KRG D +Y I +C++G+F LL
Sbjct: 430 AAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLV 488
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
M RR+FVP +ET LI G + A A + + + +++++ L + K
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRK 548
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRN-FVPQTRTV 378
+ L+ M+EKR+ + T + L+ S+ + + L ++ N ++ +
Sbjct: 549 FANESFCLVTLMLEKRIR-QNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEE- 606
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
L+ Y C+N +L + +L + +EK + +I GLC + EAF +++E
Sbjct: 607 --LLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVE 664
Query: 439 RGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNL 474
G H + ++L L +G ++L+ + + + L
Sbjct: 665 LGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATL 700
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 145/330 (43%), Gaps = 21/330 (6%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN L++++ + +E+ +F M SP + N LL + G + EM
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 228 KR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+ G +PD+ T+N I+ +CK + R+ ++ME P + T T+I G
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 287 GKARQLFNEIPSRNLVVDTGV--YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
A + + + + V V Y L+ ++I+ A+ + +M+ + ++ + VTY+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 345 TMFLGLMRSTGIEGVSELY--QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
T+ GL + + + ++ A F P T +L+K C LD ++ ++ ++
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER--------GRHMSAASFLMLERF 454
P + + +LI LC R + A ++ E+ + ++AA M E +
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFE-Y 439
Query: 455 LLQSGDIDKLKELDQMIKNLLS---VLPPS 481
L +G K K+ +++ + L+ PPS
Sbjct: 440 LCANG---KTKQAEKVFRQLMKRGVQDPPS 466
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 155/367 (42%), Gaps = 12/367 (3%)
Query: 76 LEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIML 135
L F F + S ++ + +L + F+ AW L+++ S T KAM +M+
Sbjct: 139 LAFLAFKWGEKRGCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNV--SKDTRKAMFLMM 196
Query: 136 SKIAKYQSFEDTLDGFRRME-EDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
+ Y + DT R + D F + + F LL A C +++A
Sbjct: 197 DR---YAAANDTSQAIRTFDIMDKFKHTPY-DEAFQGLLCALCRHGHIEKAEEFMLASKK 252
Query: 195 RFSPDTKSMNILLLGFKE-SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
F D + N++L G+ DVT + + EM +P+ +Y+ I + K G D
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
LRL +EM++R P IE +L++ +A +L ++ L D+ YN++I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
L + ++ A +++ MI + + T+H + + E E+ +M + P
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFH----AFLEAVNFEKTLEVLGQMKISDLGP 428
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
T ++++ + + + +L +W + + I GL S G + +A E
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIY 488
Query: 434 KQMLERG 440
+M +G
Sbjct: 489 SEMKSKG 495
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
MV G PD Y ++ CK+G G ++L+E+ME + T L+ G ++ +
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
++ Q + + L + Y+ L+ A + + + A+ L+DE+I K E + V+Y+
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ G + + L++++ + F + +L++ C + R + + SL +
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH---MSAASFLMLERFLLQSGDID 462
P ++LI L G+ +A + K+M +G H ++A S+ + L + G +D
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 463 -KLKELDQMI 471
+K LD+MI
Sbjct: 371 LVVKCLDEMI 380
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 115/266 (43%), Gaps = 3/266 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMV 227
++ LL+A +R EA + +++ + P+ S N+LL GF + G + E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+GF + V+YNI + C GR+ + LL EM+ P++ T LI+
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 288 KARQLFNEIPSRN--LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A Q+ E+ N V YN +I L + ++ + +DEMI +R + + TY+
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ ++ ++ + Q ++ + ++ C+ + L + G
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFE 431
+ P AH LI GLC G A E
Sbjct: 454 FDPDAHTYSALIRGLCLEGMFTGAME 479
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 139/329 (42%), Gaps = 5/329 (1%)
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNI 205
T + + ++E + G E +NVLL FC + + +A ++F ++ ++ F + S NI
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER-- 263
LL G EM +P VTYNI I++ GR L++L+EM +
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
+F T + +I + +E+ R + G YNA+ + + ++
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 324 ALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
A ++ + K+ Y ++ L R +L +M + F P T L++
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 384 YFCQNFRLDLSLSLWNYLVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH 442
C ++ + + + E C P + +I GLC + A E + M+E+ R
Sbjct: 467 GLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRM 526
Query: 443 MSAASFLMLERFLLQSGDIDKLKE-LDQM 470
+ ++ +L + +++ KE LD++
Sbjct: 527 PNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 226 MVKRGFSPDNVTYNIRI-DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
+V G P NV ++ ++ CK R +R++E M +P T L++
Sbjct: 97 LVTGGHKP-NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG 155
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
N G A QL ++ +T YNAL+ L + +L ++ +++K + + TY
Sbjct: 156 NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYS 215
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
+ + G + +L ++ + P + +L+ FC+ R D +++L+ L K
Sbjct: 216 FLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK- 463
G+ + + ++L+ LC G+ EA +M R S ++ +L L G ++
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 464 LKELDQMIK 472
L+ L +M K
Sbjct: 336 LQVLKEMSK 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 101/237 (42%)
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
+ PD + + D + D LE + P + T L++ KA
Sbjct: 67 WKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAI 126
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
++ + S ++ D Y L+ L + ++ A+ L+++M + + VTY+ + GL
Sbjct: 127 RVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGL 186
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
+ + +++ Q+ P T L++ + D ++ L + ++ KG P+
Sbjct: 187 CMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNL 246
Query: 411 HALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ ++L+TG C G+ +A +++ +G + S+ +L R L G ++ L
Sbjct: 247 VSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 5/266 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C + + A + KM P +T + N L+ G G + F ++
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G +P+ TY+ ++ K+ + ++LL+E+ + P + + L+ G
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A LF E+P++ + YN L+ L E A SL+ EM VTY+ +
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 348 LGLMRSTGIEGVSELYQKMAQRN--FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
L E ++ ++M++ N F + ++ C+ ++DL + + ++ +
Sbjct: 324 NSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRR 383
Query: 406 YCPHAHALDLLITGLCS-RGQVHEAF 430
P+ + I LC +V EAF
Sbjct: 384 CKPNEGTYN-AIGSLCEHNSKVQEAF 408
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 135/373 (36%), Gaps = 86/373 (23%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQE--TARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ ++ L + R D+A LL E P+L++ +++L+ K +D
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSY---NVLLTGFCKEGRTDDA 265
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNIL 206
+ FR + F + +N+LL+ C + +EA S+ +M +P + NIL
Sbjct: 266 MALFRELPAKGF---KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 207 L--LGFK-----------------------------------ESGDVTSVELFYHEMVKR 229
+ L F + G V V EM+ R
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYR 382
Query: 230 GFSPDNVTYNI-----------------------------------RIDTYCKKGRFGDG 254
P+ TYN I + C+KG
Sbjct: 383 RCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAA 442
Query: 255 LRLLEEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+LL EM R F P T + LI G G+ A + + E + VD +NA+
Sbjct: 443 FQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN--FNAM 500
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I L + + + A+ + + M+EK+ + TY + G+ +E E+ ++ R
Sbjct: 501 ILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560
Query: 372 VPQTRTVVMLMKY 384
+ Q ++M++
Sbjct: 561 IGQNAVDRIVMQF 573
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 10/330 (3%)
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRME-EDVFVGREFGTDE--F 169
+L + + P ++TL I+++ + K + ++ L+ F +M + G D F
Sbjct: 317 VLKMDEVKIRPDVVTL---GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 170 NVLLKAFCSQRQMKEARSVFGKMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N L+ C ++KEA + +M R P+ + N L+ G+ +G + + + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ P+ VT N + C+ + +ME+ + T TLIH V N
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
KA + ++ D +Y ALI+ L + + A+ +++++ E LD + Y+ M
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN-ML 552
Query: 348 LGLM-RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+GL E V E+ M + P + T L+ +F ++ + + + E G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQM 436
P +I CS G++ EA + K M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 8/303 (2%)
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
+ + C + A + ++ +P + N LL + D++ + +M +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF----VPTIETI--TTLIHGAGIVQN 285
PD VT I I+T CK R + L + E+M ++ V ++I TLI G V
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 286 AGKARQLFNEIPSRNLVVDTGV-YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A +L + V V YN LI R+ +E+A ++ M E ++ + VT +
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ G+ R G+ + M + T + L+ C ++ ++ + ++E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P A LI+GLC + H+A +++ E G + ++ ML + +K+
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 465 KEL 467
E+
Sbjct: 566 YEM 568
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C R+ +A V K+ FS D + N+L+ F + + V +M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K G PD++TYN I + K F R++E+M PT+ T +I V
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 288 KARQLFNEIPSRNLV-VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A +LF ++ + V +T +YN LI A + + ALSL +EM K V + TY+ +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
F L T E + +L +M +++ P T+ +LM+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 158/395 (40%), Gaps = 19/395 (4%)
Query: 89 PPSHVSFEMTLHILTRMRYF-DKAWMLLQETARTH---PSLITLKAMSIMLSKIAKYQSF 144
PP+ ++ ++ LH + + R ++ + L +H P+ + L L K A+ +
Sbjct: 219 PPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTA 278
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
D L + + FN LL + + KM + PD ++
Sbjct: 279 WDILSDLMKNKT------PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 332
Query: 204 NILLLGFKESGDVT-SVELFYHEMVKRG-----FSPDNVTYNIRIDTYCKKGRFGDGLRL 257
IL+ +S V ++E+F KR D++ +N ID CK GR + L
Sbjct: 333 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 258 LEEME-RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L M+ + VP T LI G A+++ + + + + N ++ +
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
R + A+ +M ++ V+ + VTY T+ + +E Y+KM + P +
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
L+ CQ R ++ + L E G+ A ++LI C + + +E M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKE-LDQM 470
+ G+ + ++ L F + D + ++ ++QM
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 141/330 (42%), Gaps = 10/330 (3%)
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRME-EDVFVGREFGTDE--F 169
+L + + P ++TL I+++ + K + ++ L+ F +M + G D F
Sbjct: 317 VLKMDEVKIRPDVVTL---GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHF 373
Query: 170 NVLLKAFCSQRQMKEARSVFGKMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N L+ C ++KEA + +M R P+ + N L+ G+ +G + + + M
Sbjct: 374 NTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMK 433
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ P+ VT N + C+ + +ME+ + T TLIH V N
Sbjct: 434 EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVE 493
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
KA + ++ D +Y ALI+ L + + A+ +++++ E LD + Y+ M
Sbjct: 494 KAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN-ML 552
Query: 348 LGLM-RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+GL E V E+ M + P + T L+ +F ++ + + + E G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQM 436
P +I CS G++ EA + K M
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 8/303 (2%)
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSP-DTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
+ + C + A + ++ +P + N LL + D++ + +M +
Sbjct: 266 ISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF----VPTIETI--TTLIHGAGIVQN 285
PD VT I I+T CK R + L + E+M ++ V ++I TLI G V
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 286 AGKARQLFNEIPSRNLVVDTGV-YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A +L + V V YN LI R+ +E+A ++ M E ++ + VT +
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ G+ R G+ + M + T + L+ C ++ ++ + ++E
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P A LI+GLC + H+A +++ E G + ++ ML + +K+
Sbjct: 506 GCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 465 KEL 467
E+
Sbjct: 566 YEM 568
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/395 (20%), Positives = 158/395 (40%), Gaps = 19/395 (4%)
Query: 89 PPSHVSFEMTLHILTRMRYF-DKAWMLLQETARTH---PSLITLKAMSIMLSKIAKYQSF 144
PP+ ++ ++ LH + + R ++ + L +H P+ + L L K A+ +
Sbjct: 219 PPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTA 278
Query: 145 EDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSM 203
D L + + FN LL + + KM + PD ++
Sbjct: 279 WDILSDLMKNKT------PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTL 332
Query: 204 NILLLGFKESGDVT-SVELFYHEMVKRG-----FSPDNVTYNIRIDTYCKKGRFGDGLRL 257
IL+ +S V ++E+F KR D++ +N ID CK GR + L
Sbjct: 333 GILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEEL 392
Query: 258 LEEME-RRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L M+ + VP T LI G A+++ + + + + N ++ +
Sbjct: 393 LVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC 452
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
R + A+ +M ++ V+ + VTY T+ + +E Y+KM + P +
Sbjct: 453 RHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
L+ CQ R ++ + L E G+ A ++LI C + + +E M
Sbjct: 513 IYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDM 572
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKE-LDQM 470
+ G+ + ++ L F + D + ++ ++QM
Sbjct: 573 EKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C R+ +A V K+ FS D + N+L+ F + + V +M
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
K G PD++TYN I + K F R++E+M PT+ T +I V
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 288 KARQLFNEIPSRNLV-VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A +LF ++ + V +T +YN LI A + + ALSL +EM K V + TY+ +
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
F L T E + +L +M + + V Q R+
Sbjct: 694 FKCLNEKTQGETLLKLMDEMVE-HLVNQIRS 723
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 45/286 (15%)
Query: 181 QMKEARSV---FGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+MKE S FGK PD + NIL+ G +SG + EMVK+ P VT
Sbjct: 136 KMKERLSSIDEFGK------PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFV-PTIETITTLIHGAGIVQNAGKARQLFNEI 296
+ I CK R + L++ +M + V PT+ +LI + A +L +E
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 297 PSRNLVVDTGVYNALITALLRS-----------------------------------KDI 321
+ VD +Y+ LI++L+++ D
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
ESA ++DEM+EK ++ D ++Y+ + R E + L++ M +R P T + ++
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
C+ + + + + + ++ KGY P L+ + LC G++
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 127/304 (41%), Gaps = 10/304 (3%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVF--VGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+I++ ++ F+D L F M + G FGT L+ C ++KEA +
Sbjct: 156 NILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT-----LIHGLCKDSRVKEALKMK 210
Query: 190 GKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
M+ + P L+ + G+++ E + D Y+ I + K
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
GR + +LEEM + P T LI+G + ++ A ++ +E+ + L D
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
YN ++ R K E A L ++M + D ++Y +F GL E + + +M
Sbjct: 331 YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEML 390
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
+ + P+ + ++ C++ +L++ LS + +G A ++I +C +
Sbjct: 391 FKGYKPRRDRLEGFLQKLCESGKLEI-LSKVISSLHRGIAGDADVWSVMIPTMCKEPVIS 449
Query: 428 EAFE 431
++ +
Sbjct: 450 DSID 453
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 126/311 (40%), Gaps = 5/311 (1%)
Query: 122 HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQ 181
H I + L++ + + LDGF + + D F + +A R
Sbjct: 72 HVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDP-KSESFAVRAIILYGRANMLDRS 130
Query: 182 MKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK-RGFSPDNVTYNI 240
++ R++ + R KS+N LL + D Y EM K G PD TYN
Sbjct: 131 IQTFRNLEQYEIPR---TVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNR 187
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
I C+ G ++ EMER+ PT + +I G + + R++ +
Sbjct: 188 MIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFG 247
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS 360
+ V YN +I L + K A +L+D ++ R+ + VTY + G ++
Sbjct: 248 VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAM 307
Query: 361 ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGL 420
L++ M + P + L+ C+ + +L L +EK + P + L+ GL
Sbjct: 308 NLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
Query: 421 CSRGQVHEAFE 431
SR +V EA E
Sbjct: 368 ASRSKVDEAKE 378
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 147/348 (42%), Gaps = 17/348 (4%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVS---FEMTLHILTRMRYFDKAWMLLQETART 121
L S +N + LE T S SP HV F + + L R ++F LL +
Sbjct: 48 LLKSENNPDRILEICRST---SLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQN 104
Query: 122 HPSLITLKAMSIMLSKIAKY---QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCS 178
P K+ S + I Y + ++ FR +E+ + R + N LL A
Sbjct: 105 QPDP---KSESFAVRAIILYGRANMLDRSIQTFRNLEQ-YEIPRTVKS--LNALLFACLM 158
Query: 179 QRQMKEARSVFGKMVSRF--SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNV 236
+ KEA V+ +M + PD ++ N ++ ESG +S EM ++ P
Sbjct: 159 AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAA 218
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEI 296
++ + ID + K+ +F + +++ M+ + T +I + + +A+ L + +
Sbjct: 219 SFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGV 278
Query: 297 PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGI 356
S + ++ Y+ LI ++++ A++L + M+ + D Y T+ L +
Sbjct: 279 MSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
Query: 357 EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
E L ++ ++N+VP + L+ ++D + L + EK
Sbjct: 339 ETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVVKEK 386
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
NVL+ +FC ++ A S+ V S DT + N ++ G E G F EMVK
Sbjct: 132 LNVLIHSFCKVGRLSFAISLLRNRV--ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVK 189
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE---------------------------- 260
G PD V+YN ID +CK G F L++E
Sbjct: 190 MGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRD 249
Query: 261 MERRKFVPTIETITTLIH---GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
M F P + T +++I+ G V G L E+ ++ + Y L+ +L +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGG---LLLREMEEMSVYPNHVTYTTLVDSLFK 306
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ AL+L +M+ + + +D V Y + GL ++ + + ++ + + N VP T
Sbjct: 307 ANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVT 366
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
L+ C+ L + + ++EK P+ +I G +G + EA ++M
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 14/327 (4%)
Query: 143 SFEDTLDGFRRMEEDVFVGREFGTDEFN--------VLLKAFCSQRQMKEARSVFGKMV- 193
S+ +DGF ++ FV + DE + +LL ++ + ++EA + MV
Sbjct: 198 SYNTLIDGFCKVGN--FVRAKALVDEISELNLITHTILLSSYYNLHAIEEA---YRDMVM 252
Query: 194 SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
S F PD + + ++ + G V L EM + P++VTY +D+ K +
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
L L +M R + T L+ G + +A + F + N V + Y AL+
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
L ++ D+ SA ++ +M+EK V + VTY +M G ++ +E L +KM +N VP
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
T ++ + + ++++ L + G + + LD L+ L G++ E
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492
Query: 434 KQMLERGRHMSAASFLMLERFLLQSGD 460
K M+ +G + ++ L + GD
Sbjct: 493 KDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 112/258 (43%), Gaps = 18/258 (6%)
Query: 96 EMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRME 155
E +HIL +M ML++ HP+L T + I L +K++ + F+ E
Sbjct: 625 EEAIHILNQM-------MLME----IHPNLTTYR---IFLDTSSKHKRADAI---FKTHE 667
Query: 156 EDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESG 214
+ G + +N L+ C K+A V G M +R F PDT + N L+ G+
Sbjct: 668 TLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGS 727
Query: 215 DVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT 274
V Y M++ G SP+ TYN I G + + L EM+ R P T
Sbjct: 728 HVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK 334
LI G + N + ++ E+ + LV T YN LI+ + A L+ EM ++
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 335 RVELDGVTYHTMFLGLMR 352
V + TY TM GL +
Sbjct: 848 GVSPNTSTYCTMISGLCK 865
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 136/305 (44%), Gaps = 37/305 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ VL+ ++EA F ++ P+ + L+ G ++GD++S E +M+
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG-------- 279
++ P+ VTY+ I+ Y KKG + + LL +ME + VP T T+I G
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 280 -----------AGIVQN-------------AGKARQ---LFNEIPSRNLVVDTGVYNALI 312
G+ +N G+ ++ L ++ S+ + +D Y +LI
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
+ D E+AL+ +EM E+ + D V+Y+ + G+++ G G Y+ M ++
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLK-FGKVGADWAYKGMREKGIE 570
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P T ++M + + L LW+ + G P + ++++ LC G++ EA
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHI 630
Query: 433 SKQML 437
QM+
Sbjct: 631 LNQMM 635
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 19/311 (6%)
Query: 169 FNVLLKAFCS-QRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDV-TSVELFYHEM 226
F+ L + + S +R AR++ PD++ N L+ F +G V V L Y +M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT--TLIHGAGIVQ 284
+ G SPD N+ I ++CK GR + LL R V +I+T+T T+I G
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISLL-----RNRVISIDTVTYNTVISGLCEHG 175
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
A +A Q +E+ ++ DT YN LI + + A +L+DE+ EL+ +T H
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLIT-H 230
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ L + + E Y+ M F P T ++ C+ ++ L + E
Sbjct: 231 TILLS--SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEM 288
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
P+ L+ L A QM+ RG + + +L L ++GD L
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD---L 345
Query: 465 KELDQMIKNLL 475
+E ++ K LL
Sbjct: 346 REAEKTFKMLL 356
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 1/253 (0%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N+++ C +M+EA + +M + P+ + I L + ++ + ++
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
G YN I T CK G ++ +ME R F+P T +L+HG + + K
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A ++ + + + YN +I L + I+ + EM + + D TY+ +
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALIS 791
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
G + ++G +Y +M VP+T T +L+ F ++ + L + ++G P
Sbjct: 792 GQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSP 851
Query: 409 HAHALDLLITGLC 421
+ +I+GLC
Sbjct: 852 NTSTYCTMISGLC 864
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/323 (18%), Positives = 124/323 (38%), Gaps = 35/323 (10%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVE 220
G + +NVL+ ++ + G PD + NI++ ++ GD +
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
+ +M G P ++ NI + C+ G+ + + +L +M + P + T + +
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR----------------------- 317
+ A + + S + + VYN LI L +
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 318 ------------SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+ ALS M+E + + TY+T+ GL + I+ V + +
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 366 MAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
M R P T L+ + + S++++ ++ G P ++LI+ + G+
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 426 VHEAFECSKQMLERGRHMSAASF 448
+ +A E K+M +RG + +++
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTY 856
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHE 225
D + +L++ C + EA + K+ + DT N + + ++ + + +
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEK 467
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M K G SPD TYNI I ++ + G + + + EE+ER P I + +LI+ G +
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A F E+ + L D Y+ L+ +++ +E A SL +EM+ K + + VTY+
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
+ L ++ +LY KM Q+ P + T +L
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 184/430 (42%), Gaps = 71/430 (16%)
Query: 94 SFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAK----YQSFEDTLD 149
+++ L R R + KA+ + E R L + A +++L +AK Q FED
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKL-DIFAYNMLLDALAKDEKACQVFEDMKK 263
Query: 150 GFRRMEEDVF------VGREFGTDE-------------------FNVLLKAFCSQRQMKE 184
R +E + +GR DE +N L++ + + +
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDK 323
Query: 185 ARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A VF +MV + P+ + ++LL G + ++ E+ KR + +Y +R
Sbjct: 324 AIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYSYLVR-- 380
Query: 244 TYCKKGRFGDGLRLLEEM-------ERRKFVP----------TIETITTL--IHGAGIVQ 284
T K G + RL +M ER ++ TIE I L IH G+V
Sbjct: 381 TLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVT 440
Query: 285 NA----------GKARQ------LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ GK +Q LF ++ D YN LI + R +++ A+++
Sbjct: 441 DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIF 500
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
+E+ + D ++Y+++ L ++ ++ +++M ++ P T LM+ F +
Sbjct: 501 EELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKT 560
Query: 389 FRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
R++++ SL+ ++ KG P+ ++L+ L G+ EA + +M ++G + ++
Sbjct: 561 ERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Query: 449 LMLERFLLQS 458
+LER LQS
Sbjct: 621 TVLER--LQS 628
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 31/337 (9%)
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKES 213
E +V VG T FNVL++A+C +++++EA V KM PDT + N + + +
Sbjct: 179 EGNVDVGPNIRT--FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 214 GDVTSVELFYHE--MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE 271
G+ E E ++K P+ T I + YC++GR DGLR + M+ + +
Sbjct: 237 GETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLV 296
Query: 272 TITTLIHG-------------------------AGIVQNAGKARQLFNEIPSRNLVVDTG 306
+LI+G +V N Q+ + N+ D
Sbjct: 297 VFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVI 356
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
Y+ ++ A + +E A + EM++ V+ D Y + G +R+ + EL + +
Sbjct: 357 TYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 416
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+ P ++ +C N +D ++ ++N + + G P+ + L+ G Q
Sbjct: 417 IVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
+A E + M G ++FL+L +G D+
Sbjct: 476 WKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 184 EARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRI 242
EA++VF + + P S LL S+ E+ + G D++ +N I
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 243 DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV 302
+ + + G D ++ L +M+ PT T TLI G GI ++ +L + +
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEG-N 181
Query: 303 VDTG----VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG-LMRSTGIE 357
VD G +N L+ A + K +E A ++ +M E V D VTY+T+ + + +
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 358 GVSELYQKMAQRNFV-PQTRTVVMLMKYFCQNFRL 391
SE+ +KM + P RT +++ +C+ R+
Sbjct: 242 AESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRV 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y L+ A+ K S S++ E+ + +LD + ++ + S +E + KM
Sbjct: 83 YTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMK 142
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC---PHAHALDLLITGLCSRG 424
+ P T T L+K + + + S L + ++E+G P+ ++L+ C +
Sbjct: 143 ELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKK 202
Query: 425 QVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+V EA+E K+M E G ++ + +Q G+
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGE 238
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 189 FGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
FG M R D+ ++LL E S ++ + ++ RGF VT++I + +CK
Sbjct: 205 FGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVC-AVTHSILVKKFCK 263
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV 307
+G+ + L + + L+ + +A +L +EI V
Sbjct: 264 QGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRA 323
Query: 308 YNALITALLRSKDIESALSLMDEMIE-KRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
YN I AL+++ + + + ++ + EL+ Y++M L++ ++GV ++ +M
Sbjct: 324 YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
R P +T+ + +FC+ +D +L L+ E G+ P A + + LI LC+ V
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+A++ K ++RG + +F L L G D +EL
Sbjct: 444 EQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 109/238 (45%), Gaps = 17/238 (7%)
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
++L+++ ++ +A F + + + ++++G ++ + F EM G
Sbjct: 643 LMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEG 702
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA----GIVQNA 286
P Y + I C + ++ + + L+ E + T L+H A G+ +
Sbjct: 703 LQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAW 762
Query: 287 GKARQLFNEIPS-RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+ R + ++IP ++L G+++ I D+E L +DE+IEK LD TY+
Sbjct: 763 TRMRNIEDKIPEMKSLGELIGLFSGRI-------DMEVELKRLDEVIEKCYPLDMYTYN- 814
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC----QNFRLDLSLSLWN 399
M L ++ E E+ +++A+R +VP RT ++L + +N R +L + WN
Sbjct: 815 MLLRMIVMNQAEDAYEMVERIARRGYVPNERTDMILERANRILEERNSRSNLGRNGWN 872
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 155/370 (41%), Gaps = 16/370 (4%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSI 133
+A FN TL PS +++ + LTR ++F L+ + + LK +I
Sbjct: 337 EAHSIFN-TLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG-----LKPDTI 390
Query: 134 MLSKIAKYQSFEDTLDG----FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+ + I S LD F +M+E G + FN L+K + +++E+ +
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKES---GCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 190 GKMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
M+ P+ ++ NIL+ + + ++M G PD VT+N Y +
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 248 KGRFGDGLR-LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
G ++ M K P + T T+++G +A + F + + +
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLF 567
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
V+N+LI L D++ ++D M E V+ D VT+ T+ ++ E+Y M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+ P +L K + + + + + N + + G P+ +I+G CS G++
Sbjct: 628 LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 427 HEAFECSKQM 436
+A + K+M
Sbjct: 688 KKAMQVYKKM 697
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 121 THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE----FNVLLKAF 176
HP+L ++ I + + D +DG + E V + EFG F+ L+ A+
Sbjct: 562 VHPNLFVFNSL------IKGFLNIND-MDG---VGEVVDLMEEFGVKPDVVTFSTLMNAW 611
Query: 177 CSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
S MK ++ M+ PD + +IL G+ +G+ E ++M K G P+
Sbjct: 612 SSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMER-RKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
V Y I +C G +++ ++M P + T TLI G G + KA +L
Sbjct: 672 VIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLK 731
Query: 295 EIPSRNLV 302
++ +N+V
Sbjct: 732 DMEGKNVV 739
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/274 (18%), Positives = 108/274 (39%), Gaps = 8/274 (2%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
D +S L+ G E G ++ +++ G P +TY + ++ F L L+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
++E+ P +I+ + N +A ++F ++ +N LI +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 319 KDIESALSLMDEMI-EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+E + L+D M+ ++ ++ + T + + IE + KM P T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEK----GYCPHAHALDLLITGLCSRGQVHEAFECS 433
L K + R+ + + + ++ + P+ ++ G C G++ EA
Sbjct: 498 FNTLAKAYA---RIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 434 KQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+M E G H + F L + L D+D + E+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEV 588
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 175/413 (42%), Gaps = 27/413 (6%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
+S SL+E +L R F + +AL FF+++ H S+ +T+HIL + R A
Sbjct: 75 LSDSLIETILLR-FKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDAR 133
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
L++ + P L + LD + V F++L
Sbjct: 134 ALIESSLLNSPPDSDL---------------VDSLLDTYEISSSTPLV--------FDLL 170
Query: 173 LKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
++ + R ++ VF ++ F+ ++N L+ +S V Y + +
Sbjct: 171 VQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRI 230
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
P+ +T I I CK+GR + + LL+ + ++ +P++ T+L+ ++
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
L + +N+VVDT Y+ ++ A + D+ SA + DEM+++ + Y T+F+ +
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVY-TVFVRVC 349
Query: 352 RSTG-IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHA 410
G ++ L +M + P T L+ F + + L +V +G P
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 411 HALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
A + ++ + V+ A E + +++G ++ L R ++ DID+
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 135/327 (41%), Gaps = 32/327 (9%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQET--ARTHPSLITLKAMSIMLSKIAKYQSFEDTL 148
S ++ +H ++ + D W + + R +P+ IT++ M +L K + + D L
Sbjct: 198 SVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLL 257
Query: 149 DG-----------------FR-----RMEEDVFVGREF-------GTDEFNVLLKAFCSQ 179
D FR R+EE + + + T +++++ A +
Sbjct: 258 DRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKE 317
Query: 180 RQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
+ AR VF +M+ R FS ++ + + E GDV E EM + G SP + T+
Sbjct: 318 GDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETF 377
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
N I + + G GL E M R +P+ ++ ++N +A ++ +
Sbjct: 378 NCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSID 437
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ V D Y+ LI + DI+ AL L EM +++ + ++ +GL +E
Sbjct: 438 KGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEA 497
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYF 385
+ + M +R P L+K F
Sbjct: 498 GEKYLKIMKKRLIEPNADIYDALIKAF 524
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 38/217 (17%)
Query: 157 DVFVGREFGTDEF--NVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFK-- 211
D + R F + F V ++ C + +KEA + +M S SP ++ N L+ GF
Sbjct: 328 DEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARF 387
Query: 212 --ESGDVTSVELF-----------YHEMVK--------------------RGFSPDNVTY 238
E + E+ ++EMVK +GF PD TY
Sbjct: 388 GWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTY 447
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
+ I + + L+L EME RK P E +LI G + +
Sbjct: 448 SHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKK 507
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
R + + +Y+ALI A + D +A + +EMI R
Sbjct: 508 RLIEPNADIYDALIKAFQKIGDKTNADRVYNEMISVR 544
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 139/312 (44%), Gaps = 17/312 (5%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYH 224
D + +++ C + A ++ M P + ++ + G V E +
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFA 606
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
+M++ G PD + Y I I+TY + GR + L+EE+ + P+ T T LI G +
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
K Q +++ L + +Y ALI L+ D + + +L M E ++ D + Y
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYI 726
Query: 345 TMFLGLMRSTGIE---------GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
T+ GL R+ + G +L Q++ + P L Y ++F +++
Sbjct: 727 TLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTK--PLVSIPSSLGNYGSKSFAMEVIG 784
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
V+K P+ + + +ITG C+ G++ EA+ + M + G + ++ +L +
Sbjct: 785 K-----VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSH 839
Query: 456 LQSGDIDKLKEL 467
+++GDI+ +L
Sbjct: 840 IEAGDIESAIDL 851
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 151/374 (40%), Gaps = 67/374 (17%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+K +C M A ++ +MV R F D N L+ GF + G + + + +M+
Sbjct: 275 YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 228 KRGFSPDNVTYNIRIDTYCK------------------------------------KGRF 251
K+G + TY+I I +YCK KG
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 252 GDGLRLLEEMERRKFVPTIETITTLI---------------------HGAGI----VQNA 286
+ LL M VP T L+ +G GI + +
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 287 G----KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
G K L EI ++ + + TAL ++ +ALS +++M+ +
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y+++ L + IE ++ L + + +FVP T ++++ C+ D + ++ + +
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
E G P +I L +G+V EA E +MLE G +++++ ++G ID
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 463 KLKEL-DQMIKNLL 475
+ EL ++++K+ L
Sbjct: 635 EANELVEEVVKHFL 648
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 127/337 (37%), Gaps = 19/337 (5%)
Query: 78 FFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIML 135
F+N + + P + + L ++R FD+A L + PS + S+++
Sbjct: 117 FYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSR---NSSSLVV 173
Query: 136 SKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM--V 193
++ F + F +++E G L K C + EA + + +
Sbjct: 174 DELCNQDRFLEAFHCFEQVKER---GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGM 230
Query: 194 SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
+R L F + G E + M G+ D V Y + YCK
Sbjct: 231 TRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTM 290
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
+RL M R F TLIHG + K R +F+++ + + + Y+ +I
Sbjct: 291 AMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIG 350
Query: 314 ALLRSKDIESALSLM-----DEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
+ + +++ AL L E I + V Y + G + G++ +L +M
Sbjct: 351 SYCKEGNVDYALRLFVNNTGSEDISRNVH----CYTNLIFGFYKKGGMDKAVDLLMRMLD 406
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
VP T +L+K + L ++ + +++ G
Sbjct: 407 NGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 171 VLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
V+ A CSQR A S KMV+ +P S N ++ + + + + + +
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL 541
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
F PD TY I ++ CKK +++ ME PT+ +++I G +A
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ F ++ + D Y +I R+ I+ A L++E+++ + TY + G
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
++ +E + KM + P L+ +F + S +L+ + E H
Sbjct: 662 FVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDI-KH 720
Query: 410 AH-ALDLLITGL 420
H A L++GL
Sbjct: 721 DHIAYITLLSGL 732
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/407 (21%), Positives = 155/407 (38%), Gaps = 22/407 (5%)
Query: 62 LGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETA-R 120
G L S +N L +L FF + + P VS + L + A L T +
Sbjct: 83 FGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFK 142
Query: 121 THPSLI-----TLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKA 175
P+L+ L ++ I Y +D +G N +L
Sbjct: 143 PEPTLLEQYVKCLSEEGLVEEAIEVYNVLKD-------------MGISSSVVTCNSVLLG 189
Query: 176 FCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
R++ + +MV S F D++ + L+ + GDV+ + +K+G P
Sbjct: 190 CLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPG 247
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
Y I +C+ G + +L M P++ +I G + + +A +F
Sbjct: 248 QYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFK 307
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
+ + D VY +I + SA L EMI+K + + Y+ M G +
Sbjct: 308 NLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRG 367
Query: 355 GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
I V Y +M + + + ++K FC + + D + ++ + E G P+A +
Sbjct: 368 EISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYN 427
Query: 415 LLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
LI G C +V + + K++ G S ++ L R L S +
Sbjct: 428 ALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSV 474
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 5/298 (1%)
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
S + N +LLG ++ + + EMV+ F + + IR C G +G
Sbjct: 177 SSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRCLIR--ALCDGGDVSEGYE 234
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
LL++ ++ P LI G + N ++ + + + N +Y +I L
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
+K A + + +K D V Y TM G + +L+ +M ++ P
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 377 TV-VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQ 435
VM+ +F + + L + +N ++ GY + + +I G CS G+ EAFE K
Sbjct: 355 AYNVMIHGHF-KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
Query: 436 MLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGHATGSSNLKV 493
M E G +A ++ L + + ++K +L + +K L + P +A NLK+
Sbjct: 414 MSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELK-ALGLKPSGMAYAALVRNLKM 470
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +++ FC + + AR ++ +M+ + P+ + N+++ G + G+++ VE FY+EM+
Sbjct: 321 YTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEML 380
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G+ ++ N I +C G+ + + + M P T LI G
Sbjct: 381 RNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
K +L+ E+ + L Y AL+ L S + ++L+L
Sbjct: 441 KGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 145/340 (42%), Gaps = 54/340 (15%)
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILL-- 207
+R ++E V G FN+L+ + K+A F K + + P S N +L
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 208 -LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
LG K+ +E Y +M++ GFSPD +TYNI + T + G+ RL +EM R F
Sbjct: 229 LLGVKQ---YKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV--YNALITALLRSKDIESA 324
P T L+H G A N + + + +D V Y LI L R+ ++E+
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHM--KEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
+DEM++ D V Y M G + S ++ E++++M TV
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM----------TV------ 387
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMS 444
KG P+ + +I GLC G+ EA K+M RG + +
Sbjct: 388 -------------------KGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Query: 445 AASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGH 484
+ L +L ++G KL E ++I+ ++ KGH
Sbjct: 429 FVVYSTLVSYLRKAG---KLSEARKVIREMV-----KKGH 460
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 131/325 (40%), Gaps = 21/325 (6%)
Query: 94 SFEMTLHILTRMRYFDKAWMLLQE--------TARTHPSLITLKAMSIMLSKIAKYQSFE 145
S+ + + I + W L+ E TART +L+ L+K A Q
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTF-NLLICSCGEAGLAKQAVVQF-- 207
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMN 204
M+ F R F +N +L + +Q K V+ +M+ FSPD + N
Sbjct: 208 --------MKSKTFNYRPF-KHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYN 258
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
ILL G + + + EM + GFSPD+ TYNI + K + L L M+
Sbjct: 259 ILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV 318
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
P++ TTLI G N + +E+ D Y +IT + S +++ A
Sbjct: 319 GIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA 378
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
+ EM K + TY++M GL + L ++M R P L+ Y
Sbjct: 379 KEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSY 438
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPH 409
+ +L + + +V+KG+ H
Sbjct: 439 LRKAGKLSEARKVIREMVKKGHYVH 463
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 148/361 (40%), Gaps = 14/361 (3%)
Query: 71 NGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKA 130
G L FF++ + + ++ M++ + + F + L E R LIT
Sbjct: 657 QGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEM-RRQGCLITQDT 715
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQ--RQMKEARSV 188
+IM+ + + + F+ M++ +G + F L+ C + R ++EA
Sbjct: 716 WAIMIMQYGRTGLTNIAIRTFKEMKD---MGLIPSSSTFKCLITVLCEKKGRNVEEATRT 772
Query: 189 FGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
F +M+ S F PD + + L E G+ + + K GF P V Y+I I C+
Sbjct: 773 FREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCR 831
Query: 248 KGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVD 304
G+ + L L E + + T +++HG G +Q A EI ++ V
Sbjct: 832 IGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGV-- 889
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
VY +LI + K +E L +M + E VTY M G M +E ++
Sbjct: 890 -HVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFR 948
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
M +R P +T + CQ + + +L L + +++KG P + GL G
Sbjct: 949 NMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREG 1008
Query: 425 Q 425
+
Sbjct: 1009 K 1009
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 140/304 (46%), Gaps = 3/304 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L+ + +++ + VF KM S F D + NI++ +G FY EM+
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G + TY + +D K + + ++M R + + L+ +
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A +L E+ ++ + +D + L+ L R+ + AL ++D M ++++ D Y +
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIII 405
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G +R + E ++ + + P+ T +M++ + + + +L+N ++E G
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK-LKE 466
P + A+ ++ G + +V EA++ M E+G + S+ + + L +S D+ +K
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 467 LDQM 470
+QM
Sbjct: 526 FNQM 529
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 163/401 (40%), Gaps = 24/401 (5%)
Query: 83 LHHSQSPPSHVSFE-MTLHILTRMRYFDKAWMLLQE-----TARTHPSLIT--LKAMSIM 134
+ S PP+ + + M + + R+ + W QE T + P L+ L+ I
Sbjct: 598 VQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQ 657
Query: 135 LSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS 194
+ + ++ S+ +G++ ++ +N+ +K + K+ RS+F +M
Sbjct: 658 GNAVLRFFSWVGKRNGYKH-----------NSEAYNMSIKVAGCGKDFKQMRSLFYEMRR 706
Query: 195 RFSPDTK-SMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC-KKGR-F 251
+ T+ + I+++ + +G + EM G P + T+ I C KKGR
Sbjct: 707 QGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNV 766
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+ R EM R FVP E + + V N A+ + + V T Y+
Sbjct: 767 EEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV-TVAYSIY 825
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
I AL R +E ALS + +R LD TY ++ GL++ ++ + M +
Sbjct: 826 IRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGT 885
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
P L+ YF + +L+ L + + P +I G S G+V EA+
Sbjct: 886 KPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWN 945
Query: 432 CSKQMLERGRHMSAASFLMLERFLLQSGDI-DKLKELDQMI 471
+ M ERG ++ L Q+ D LK L +M+
Sbjct: 946 AFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEML 986
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 10/292 (3%)
Query: 191 KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR--GFSPDNVTYNIRIDTYCKK 248
K+ RF P+ N+L FK V + + + VK+ GFS YN + +
Sbjct: 148 KLSFRFEPEIVE-NVLKRCFK----VPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEA 202
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
L+ EME+ I T T LI G + GK +F ++ +D Y
Sbjct: 203 RNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAY 262
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N +I +L + + AL EM+EK + TY + + +S ++ V + M +
Sbjct: 263 NIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVR 322
Query: 369 RNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
+ + L+K FC + ++ +L L L K C A ++L+ GLC ++ +
Sbjct: 323 ICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVD 382
Query: 429 AFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPP 480
A E M R S +++ +L Q+ D+ K E ++IK S PP
Sbjct: 383 ALEIVDIMKRRKLDDSNVYGIIISGYLRQN-DVSKALEQFEVIKK--SGRPP 431
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 176/418 (42%), Gaps = 41/418 (9%)
Query: 92 HVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGF 151
H E+ + IL R + A LL + L+ ++A + +L ++ +E +D F
Sbjct: 175 HQVIEIFVRILGRESQYSVAAKLLDKIP-LQEYLLDVRAYTTILHAYSRTGKYEKAIDLF 233
Query: 152 RRMEE--------------DVF--VGREFGT---------------DEF--NVLLKAFCS 178
RM+E DVF +GR + DEF + +L A
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR 293
Query: 179 QRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVT 237
+ ++EA+ F ++ S + P T + N LL F ++G T EM + D+VT
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 238 YNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
YN + Y + G + ++E M ++ +P T TT+I G +A +LF +
Sbjct: 354 YNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
V +T YNA+++ L + + ++ +M + T++TM L L + G++
Sbjct: 414 EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM-LALCGNKGMD 472
Query: 358 G-VSELYQKMAQRNFVPQTRTVVMLMKYF--CQNFRLDLSLSLWNYLVEKGYCPHAHALD 414
V+ ++++M F P T L+ + C + +D S ++ + G+ +
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS-EVDAS-KMYGEMTRAGFNACVTTYN 530
Query: 415 LLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
L+ L +G M +G + S+ ++ + + G+ ++ ++ IK
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 122/286 (42%), Gaps = 7/286 (2%)
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLG 209
FR M+ G E D FN L+ A+ +A ++G+M + F+ + N LL
Sbjct: 479 FREMKS---CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPT 269
GD S E +M +GF P +Y++ + Y K G + R+ ++ + P+
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 270 IETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMD 329
+ TL+ + + + F D ++N++++ R+ + A +++
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 330 EMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
+ E + D VTY+++ +R E+ + + + P + ++K FC+
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG---QVHEAFEC 432
+ ++ + + + E+G P + ++G + G ++ + EC
Sbjct: 716 LMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIEC 761
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 21/283 (7%)
Query: 169 FNVLLKAFCSQRQM-KEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+N +L A C + M K VF +M S F PD + N L+ + G Y EM
Sbjct: 459 WNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH-------- 278
+ GF+ TYN ++ +KG + G ++ +M+ + F PT + + ++
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 279 -GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
G ++N K Q+F PS L+ + N AL S E A +L + K
Sbjct: 578 LGIERIENRIKEGQIF---PSWMLLRTLLLANFKCRALAGS---ERAFTLFKKHGYKP-- 629
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
D V +++M R+ + + + + + P T LM + + + +
Sbjct: 630 -DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L + P + + +I G C RG + EA +M ERG
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 16/197 (8%)
Query: 81 FTLHHSQS-PPSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSK 137
FTL P V F L I TR +D+A +L+ P L+T ++ M +
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 138 IAKYQSFEDTLDGFRR--MEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR 195
+ E+ L + ++ D+ +N ++K FC + M+EA + +M R
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLV--------SYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 196 -FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
P + N + G+ G +E M K P+ +T+ + +D YC+ G++ +
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Query: 255 LRLLEEMERRKFVPTIE 271
+ + ++ + F P +
Sbjct: 791 MDFVSKI--KTFDPCFD 805
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/286 (18%), Positives = 103/286 (36%), Gaps = 36/286 (12%)
Query: 138 IAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-F 196
I+ Y +D + E G +N LL A + + +V M S+ F
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 197 SPDTKSMNILLLGFKESGDVTSVE----------LFYHEMV------------------- 227
P S +++L + + G+ +E +F M+
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 228 ------KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
K G+ PD V +N + + + + +LE + P + T +L+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
KA ++ + L D YN +I R ++ A+ ++ EM E+ +
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
TY+T G + ++ + MA+ + P T M++ +C+
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCR 783
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 26/259 (10%)
Query: 182 MKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
M+EAR +F ++ SR + + ++ G+ S ++ E+ + EM +R V++N
Sbjct: 93 MREARELFDRVDSR--KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTM 146
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
ID Y + GR L L +EM R V + L+ I +A LF +P R++
Sbjct: 147 IDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRI----DEAMNLFERMPRRDV 202
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
V + A++ L ++ ++ A L D M E+ + ++++ M G ++ I+ +
Sbjct: 203 V----SWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQ 254
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
L+Q M +R+F ++ F +N ++ + L++ + EK + +ITG
Sbjct: 255 LFQVMPERDFASWN----TMITGFIRNREMNKACGLFDRMPEKNVI----SWTTMITGYV 306
Query: 422 SRGQVHEAFECSKQMLERG 440
+ EA +ML G
Sbjct: 307 ENKENEEALNVFSKMLRDG 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
I CK G+ + +L + + R V T T +I G + + +AR+LF+ + SR
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVV----TWTHVITGYIKLGDMREARELFDRVDSRKN 108
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
VV + A+++ LRSK + A L EM E+ V V+++TM G +S I+ E
Sbjct: 109 VV---TWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALE 161
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
L+ +M +RN V V K Q R+D +++L+ + + +D GL
Sbjct: 162 LFDEMPERNIVSWNSMV----KALVQRGRIDEAMNLFERMPRRDVVSWTAMVD----GLA 213
Query: 422 SRGQVHEA---FEC 432
G+V EA F+C
Sbjct: 214 KNGKVDEARRLFDC 227
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
D VT+ I Y K G + L + ++ RK + T T ++ G + A LF
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 294 NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
E+P RN+V +N +I +S I+ AL L DEM E+ + V++++M L++
Sbjct: 133 QEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQR 184
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
I+ L+++M +R+ V T V L K N ++D + L++ + E+ +
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAK----NGKVDEARRLFDCMPERNII----SW 236
Query: 414 DLLITGLCSRGQVHEAFECSKQMLER 439
+ +ITG ++ EA + + M ER
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPER 262
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 128/318 (40%), Gaps = 13/318 (4%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N +L CS ++ +A + M P S + L+ G + MV
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
G PD +TYN+ I CKKG L LLE+M P + T T+I NA +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 289 A-----RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
A QL N P + Y L+ + R A+ ++++M + D VTY
Sbjct: 228 AIRFWKDQLQNGCPPFMIT-----YTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+++ R +E V+ + Q + T T L+ C + D + N + +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
YCP ++LI GLC + A + QMLE+ ++ + + + G +D
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 464 LKELDQMIKNLLSVLPPS 481
EL ++KN + PP
Sbjct: 403 AIELLGLLKN--TCCPPG 418
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 139/328 (42%), Gaps = 12/328 (3%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETA 119
N + R + N +A+ F+ L + PP +++ + + ++ R +A +L++ A
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNG-CPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 120 --RTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFV-GREFGTDEFNVLLKAF 176
+P ++T ++ Y L+ + + + G E T +N LL +
Sbjct: 272 VEGCYPDIVTYNSL-------VNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Query: 177 CSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDN 235
CS E + M + + P + NIL+ G ++ ++ F+++M+++ PD
Sbjct: 325 CSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
VTYN + K+G D + LL ++ P + T ++I G KA +L+++
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ + D +LI R+ +E A ++ E + + G TY + GL +
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKE 504
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMK 383
IE E+ + M P ++K
Sbjct: 505 IEMAIEVVEIMLTGGCKPDETIYTAIVK 532
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 143/343 (41%), Gaps = 5/343 (1%)
Query: 99 LHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDV 158
LH L A L++ AR H + + S ++ +A+ + + R M V
Sbjct: 111 LHNLCSNGKLTDACKLVEVMAR-HNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM---V 166
Query: 159 FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVT 217
G T +N+++ C + ++ A + M +S PD + N ++ + G+
Sbjct: 167 MSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAE 226
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
F+ + ++ G P +TY + ++ C+ + +LE+M P I T +L+
Sbjct: 227 QAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLV 286
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
+ N + + I S L ++T YN L+ +L + + +++ M +
Sbjct: 287 NYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYC 346
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSL 397
+TY+ + GL ++ + + + +M ++ +P T ++ + +D ++ L
Sbjct: 347 PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIEL 406
Query: 398 WNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L P + +I GL +G + +A E QML+ G
Sbjct: 407 LGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAG 449
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 95/234 (40%)
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
D T N + C G+ D +L+E M R VP + + L+ G + KA +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 294 NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
+ V DT YN +I L + I +AL L+++M D +TY+T+ +
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
E ++ Q P T +L++ C+ ++ + + +G P
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 414 DLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ L+ C RG + E + +L G ++ ++ L L D+++E+
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M++ P +TYN ID +CK+ R D R+L+ M + P + T +TLI+G +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
++F E+ R +V +T Y LI + D+++A L++EMI V D +T+H
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 346 MFLGL 350
M GL
Sbjct: 121 MLAGL 125
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P T + N ++ GF + V + M +G SPD VT++ I+ YCK R +G+ +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
EM RR V T TTLIHG V + A+ L NE+ S + D ++ ++ L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 318 SKDIESALSLMDEM 331
K++ A ++++++
Sbjct: 128 KKELRKAFAILEDL 141
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 305 TGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
T YN++I + ++ A ++D M K D VT+ T+ G ++ ++ E++
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRG 424
+M +R V T T L+ FCQ LD + L N ++ G P ++ GLCS+
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 425 QVHEAF 430
++ +AF
Sbjct: 130 ELRKAF 135
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 3/274 (1%)
Query: 169 FNVLLKAFCSQRQM-KEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+N LL A C+ R + EA VF M PD + + L+ F + + V EM
Sbjct: 250 YNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
G PD +YN+ ++ Y K G + + + +M+ P T + L++ G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
RQLF E+ S N D YN LI + ++L +M+E+ +E D TY +
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+ E ++ Q M + VP ++ +++ F Q + +L +N + E G
Sbjct: 429 IFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS 488
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
P L+ G V E+ ++++ G
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAILSRLVDSG 522
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 135/308 (43%), Gaps = 11/308 (3%)
Query: 82 TLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKY 141
T++ P ++ + ++R +K LL E A + SL + + +++L AK
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA-SGGSLPDITSYNVLLEAYAKS 330
Query: 142 QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDT 200
S ++ + F +M+ G + ++VLL F + + R +F +M S PD
Sbjct: 331 GSIKEAMGVFHQMQA---AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDA 387
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
+ NIL+ F E G V +H+MV+ PD TY I K G D ++L+
Sbjct: 388 ATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQY 447
Query: 261 MERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
M VP+ + T +I A + + A A +E+ S N ++T +++L+ + R
Sbjct: 448 MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS-NPSIET--FHSLLYSFAR 504
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
++ + +++ +++ + + T++ + E + Y M + P RT
Sbjct: 505 GGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Query: 378 VVMLMKYF 385
+ ++ +
Sbjct: 565 LEAVLSVY 572
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 124/318 (38%), Gaps = 47/318 (14%)
Query: 157 DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRF--SPDTKSMNILLLGFKESG 214
D+F + ++F ++ K F + + + +F M + P+ I++ G
Sbjct: 97 DIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREG 155
Query: 215 DVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT 274
+ + EM +G S +Y I+ Y + GR+ L LL+ M+ K P+I T
Sbjct: 156 LLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILT-- 213
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK-DIESALSLMDEMIE 333
YN +I A R D E L L EM
Sbjct: 214 ---------------------------------YNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 334 KRVELDGVTYHTMFLGLMRSTGIEGVSE----LYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
+ ++ D VTY+T L+ + I G+ + +++ M VP T L++ F +
Sbjct: 241 EGIQPDIVTYNT----LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLR 296
Query: 390 RLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFL 449
RL+ L + G P + ++L+ G + EA QM G +A ++
Sbjct: 297 RLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYS 356
Query: 450 MLERFLLQSGDIDKLKEL 467
+L QSG D +++L
Sbjct: 357 VLLNLFGQSGRYDDVRQL 374
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 123/299 (41%), Gaps = 6/299 (2%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
+IM+S + + + L+ F M F + L+ A+ + + + + +
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVF---SYTALINAYGRNGRYETSLELLDR 201
Query: 192 MVS-RFSPDTKSMNILLLGFKESG-DVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
M + + SP + N ++ G D + + EM G PD VTYN + +G
Sbjct: 202 MKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ + M VP + T + L+ G ++ K L E+ S + D YN
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYN 321
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
L+ A +S I+ A+ + +M + TY + +S + V +L+ +M
Sbjct: 322 VLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSS 381
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
N P T +L++ F + ++L++ +VE+ P + +I C +G +HE
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHE 439
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 105/257 (40%), Gaps = 9/257 (3%)
Query: 83 LHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTH--PSLITLKAMSIMLSKIAK 140
+ S + P ++ + + + YF + L + + P + T + + K
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PD 199
+ ED + M + V + + +++AF +EA F M S P
Sbjct: 438 H---EDARKILQYMTANDIVP---SSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPS 491
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
++ + LL F G V E +V G + T+N +I+ Y + G+F + ++
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYV 551
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
+ME+ + P T+ ++ + + R+ F E+ + +++ Y ++ +++
Sbjct: 552 DMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTE 611
Query: 320 DIESALSLMDEMIEKRV 336
+ L++EM+ RV
Sbjct: 612 RWDDVNELLEEMLSNRV 628
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 4/302 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPD-TKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L+++ C + +AR+V M+ + D T+ NI L G + T + M+
Sbjct: 380 YKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSML 439
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV-PTIETITTLIHGAGIVQNA 286
+ PD T N I+ CK GR D +++L++M KF P T+ T++ G A
Sbjct: 440 QGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRA 499
Query: 287 GKARQLFNEI-PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A + N + P + YNA+I L + + A+S+ ++ + V D TY
Sbjct: 500 EEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAI 559
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ GL + ++ + + + + +K CQ+ L + L + G
Sbjct: 560 IIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
P+ + +I G EA++ ++M + G+ A ++ +L++ L S D+ +
Sbjct: 620 AIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK-LHDSMDLTVER 678
Query: 466 EL 467
EL
Sbjct: 679 EL 680
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 124/289 (42%), Gaps = 14/289 (4%)
Query: 162 REFGTDEFNV--LLKAFCSQRQMKEA-RSVFGKMVSRFSPDTKSMNILLLGFKESGDVTS 218
R + D N+ ++ + C + EA R + S F PD ++ N+++ S S
Sbjct: 84 RGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVS 143
Query: 219 VELFYHEMV--KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTL 276
H ++ K+ F P YN ++ C R D +L+ +M R +P + T TTL
Sbjct: 144 TLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTL 203
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK-R 335
I G ++ A ++F+E+ + ++ + LI L+ +D+E+ LM E+ E +
Sbjct: 204 IGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMK 263
Query: 336 VELDGVTYHTMFLGLMRSTGIEG----VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
E D F L+ S EG + E+ + M+ V ++ C+ R
Sbjct: 264 NETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRN 323
Query: 392 DLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ + + KG P + + +I GLC G A+ Q+LE G
Sbjct: 324 HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAY----QLLEEG 368
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 123/308 (39%), Gaps = 37/308 (12%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEM 226
F + A+C R+M A F M P+ N ++ G+ +SGD+ FY M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIV 283
K PD T+NI I+ YC+ +F L L EM+ + P + + TLI G +G +
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 284 QNAGK-ARQL------FNEIPSRNLV--------VDTGV-----------------YNAL 311
+ K A ++ F+E LV VD Y +L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
+ L A+ +M+E+ +K + T+ GL +S E S +KM
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
+P + T +L++ C + + L KGY P +L++G G+ E
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 432 CSKQMLER 439
+ML++
Sbjct: 460 LVNEMLDK 467
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 13/279 (4%)
Query: 109 DKAWMLLQETA--RTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
DKA Q R P + T +I+++ + F+ LD FR M+E G E
Sbjct: 210 DKALRFYQRMGKERAKPDVCTF---NILINGYCRSSKFDLALDLFREMKEK---GCEPNV 263
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMV---SRFSPDTKSMNILLLGFKESGDVTSVELFY 223
FN L++ F S +++E + +M+ RFS T IL+ G G V
Sbjct: 264 VSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEAT--CEILVDGLCREGRVDDACGLV 321
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+++ + P Y ++ C + + + ++EE+ ++ P TTL+ G
Sbjct: 322 LDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKS 381
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
KA ++ + ++ D+ +N L+ L S A L K E D TY
Sbjct: 382 GRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTY 441
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
H + G + + L +M ++ +P T LM
Sbjct: 442 HVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLM 480
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 104/280 (37%), Gaps = 45/280 (16%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAM 131
KAL F+ + ++ P +F + ++ R FD A L +E P++++ +
Sbjct: 211 KALRFYQ-RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTL 269
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSV--- 188
I + S +G + E + +G F +L+ C + ++ +A +
Sbjct: 270 ------IRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLD 323
Query: 189 ------------FGKMVSRFSPDTKSM---------------------NILLLGFKESGD 215
+G +V + + K++ L+ G ++SG
Sbjct: 324 LLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 216 VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITT 275
F +M+ G PD+VT+N+ + C D RL + + P T
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
L+ G + L NE+ ++++ D YN L+ L
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N ++ C R+++ A +M R SP+ + N L G+ GDV V +++
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
GF PD +T+++ I+ C+ D +EM P T LI +
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTD 547
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
++ +LF ++ L D YNA I + + + ++ A L+ M+ ++ D TY T+
Sbjct: 548 RSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLI 607
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
L S E++ + + VP + T
Sbjct: 608 KALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 104/251 (41%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P T+ N ++ +S + L + +M G PD TYNI I CKKG + +RL
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+++ME+ P + T T LI G I +A + + R L + + + R
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
A ++ +EK L V Y + L ++ + + +K+ +R ++P + T
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
M + L + +++ V +G P + +L+ L + + E KQM
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 438 ERGRHMSAASF 448
G S S+
Sbjct: 418 VDGLLSSVYSY 428
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 102/264 (38%), Gaps = 1/264 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN + + E +F VSR P +L+ + + + + +M
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G +YN ID CK R + L EM+ R P + T T + G + +
Sbjct: 418 VDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVK 477
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
K + ++ D ++ +I L R+K+I+ A EM+E +E + +TY+ +
Sbjct: 478 KVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ + +L+ KM + P ++ FC+ ++ + L ++ G
Sbjct: 538 RSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLK 597
Query: 408 PHAHALDLLITGLCSRGQVHEAFE 431
P LI L G+ EA E
Sbjct: 598 PDNFTYSTLIKALSESGRESEARE 621
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 135/327 (41%), Gaps = 8/327 (2%)
Query: 142 QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDT 200
++FE L GF ME+D + R ++ +L + KE K+ R + PD+
Sbjct: 303 KAFE-VLVGF--MEKDSNLQRV----GYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDS 355
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
+ N + + D+ + V RG P Y + + RF +G R L++
Sbjct: 356 STFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQ 415
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M + ++ + +I + A E+ R + + +N ++ D
Sbjct: 416 MGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGD 475
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
++ ++++++ + D +T+ + L R+ I+ + +++M + P T +
Sbjct: 476 VKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNI 535
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L++ C D S+ L+ + E G P +A + I C +V +A E K ML G
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIG 595
Query: 441 RHMSAASFLMLERFLLQSGDIDKLKEL 467
++ L + L +SG + +E+
Sbjct: 596 LKPDNFTYSTLIKALSESGRESEAREM 622
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 9/273 (3%)
Query: 157 DVFVGREF--GTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKES 213
D FV R G + + VL++A + ++ E +M V S N ++ ++
Sbjct: 379 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 438
Query: 214 GDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETI 273
+ + +F EM RG SP+ VT+N + Y +G +LE++ F P + T
Sbjct: 439 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITF 498
Query: 274 TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIE 333
+ +I+ + A F E+ + + YN LI + + D + ++ L +M E
Sbjct: 499 SLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE 558
Query: 334 KRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDL 393
+ D Y+ + ++ EL + M + P T L+K ++ R
Sbjct: 559 NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESE 618
Query: 394 SLSLWNYLVEKGYCPHAHA------LDLLITGL 420
+ +++ + G P ++ LDL +GL
Sbjct: 619 AREMFSSIERHGCVPDSYTKRLVEELDLRKSGL 651
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 123 PSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
P +IT S++++ + + + +D D F+ M E G E +N+L+++ CS
Sbjct: 493 PDVITF---SLIINCLCRAKEIKDAFDCFKEMLE---WGIEPNEITYNILIRSCCSTGDT 546
Query: 183 KEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
+ +F KM SPD + N + F + V E M++ G PDN TY+
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVP 268
I + GR + + +ER VP
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVP 633
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 159/388 (40%), Gaps = 58/388 (14%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTL 148
S + F M + ++ F+ A +L ++ + P++I+ A+ + K + E
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI- 196
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV----SRFSPDTKSMN 204
FRRM+ G E + ++LK F + KEA VF ++ S PD K +
Sbjct: 197 --FRRMQSS---GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 251
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRG--------------------------------FS 232
+++ +K++G+ + MV +G
Sbjct: 252 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ 311
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD V+Y + I Y + R + L + EEM PT + L+ I +A+ +
Sbjct: 312 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG-----VTYHTMF 347
F + + D Y +++A + + D+E A E KR+++DG VTY T+
Sbjct: 372 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA-----EKFFKRIKVDGFEPNIVTYGTLI 426
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTR--TVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
G ++ +E + E+Y+KM T +M C+NF +L + + G
Sbjct: 427 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF--GSALGWYKEMESCG 484
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECS 433
P A ++L++ ++ ++ EA E +
Sbjct: 485 VPPDQKAKNVLLSLASTQDELEEAKELT 512
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS 124
++ N KA + F+ ++ P S V++ + T + K + +Q + P
Sbjct: 256 MYKKAGNYEKARKVFS-SMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD-IQPD 313
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
+++ ++++ + + E+ L F EE + G +N+LL AF +++
Sbjct: 314 VVSY---ALLIKAYGRARREEEALSVF---EEMLDAGVRPTHKAYNILLDAFAISGMVEQ 367
Query: 185 ARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A++VF M R PD S +L + + D+ E F+ + GF P+ VTY I
Sbjct: 368 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 427
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
Y K + + E+M +TT++ +G +N G A + E+ S +
Sbjct: 428 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 487
Query: 304 DTGVYNALITALLRSKDIESALSL 327
D N L++ ++E A L
Sbjct: 488 DQKAKNVLLSLASTQDELEEAKEL 511
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/284 (17%), Positives = 121/284 (42%), Gaps = 8/284 (2%)
Query: 187 SVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
SV KM S +P+ S L+ + G + E + M G P +TY I + T+
Sbjct: 163 SVLSKMGS--TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV 220
Query: 247 KKGRFGDGLRLLEEM---ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
+ +F + + E + ++ P + +I+ N KAR++F+ + + +
Sbjct: 221 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 280
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
T YN+L++ K++ + D+M ++ D V+Y + R+ E ++
Sbjct: 281 STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 337
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
++M P + +L+ F + ++ + +++ + P + +++ +
Sbjct: 338 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 397
Query: 424 GQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ A + K++ G + ++ L + ++ D++K+ E+
Sbjct: 398 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 159/388 (40%), Gaps = 58/388 (14%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTL 148
S + F M + ++ F+ A +L ++ + P++I+ A+ + K + E
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAI- 203
Query: 149 DGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV----SRFSPDTKSMN 204
FRRM+ G E + ++LK F + KEA VF ++ S PD K +
Sbjct: 204 --FRRMQSS---GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYH 258
Query: 205 ILLLGFKESGDVTSVELFYHEMVKRG--------------------------------FS 232
+++ +K++G+ + MV +G
Sbjct: 259 MMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQ 318
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
PD V+Y + I Y + R + L + EEM PT + L+ I +A+ +
Sbjct: 319 PDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 378
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG-----VTYHTMF 347
F + + D Y +++A + + D+E A E KR+++DG VTY T+
Sbjct: 379 FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA-----EKFFKRIKVDGFEPNIVTYGTLI 433
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTR--TVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
G ++ +E + E+Y+KM T +M C+NF +L + + G
Sbjct: 434 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNF--GSALGWYKEMESCG 491
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECS 433
P A ++L++ ++ ++ EA E +
Sbjct: 492 VPPDQKAKNVLLSLASTQDELEEAKELT 519
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 9/264 (3%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS 124
++ N KA + F+ ++ P S V++ + T + K + +Q + P
Sbjct: 263 MYKKAGNYEKARKVFS-SMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD-IQPD 320
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
+++ ++++ + + E+ L F EE + G +N+LL AF +++
Sbjct: 321 VVSY---ALLIKAYGRARREEEALSVF---EEMLDAGVRPTHKAYNILLDAFAISGMVEQ 374
Query: 185 ARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A++VF M R PD S +L + + D+ E F+ + GF P+ VTY I
Sbjct: 375 AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIK 434
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
Y K + + E+M +TT++ +G +N G A + E+ S +
Sbjct: 435 GYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPP 494
Query: 304 DTGVYNALITALLRSKDIESALSL 327
D N L++ ++E A L
Sbjct: 495 DQKAKNVLLSLASTQDELEEAKEL 518
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/284 (17%), Positives = 121/284 (42%), Gaps = 8/284 (2%)
Query: 187 SVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC 246
SV KM S +P+ S L+ + G + E + M G P +TY I + T+
Sbjct: 170 SVLSKMGS--TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFV 227
Query: 247 KKGRFGDGLRLLEEM---ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
+ +F + + E + ++ P + +I+ N KAR++F+ + + +
Sbjct: 228 EGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQ 287
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
T YN+L++ K++ + D+M ++ D V+Y + R+ E ++
Sbjct: 288 STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVF 344
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR 423
++M P + +L+ F + ++ + +++ + P + +++ +
Sbjct: 345 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNA 404
Query: 424 GQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ A + K++ G + ++ L + ++ D++K+ E+
Sbjct: 405 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 180 RQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTY 238
+Q E + +MV P+T + N L+ + + + +++M + G PD VTY
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
ID + K G + + + M+ P T + +I+ G + A +LF E+
Sbjct: 433 CTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG 492
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+ + +N +I ++++ E+AL L +M + D VTY + L +E
Sbjct: 493 QGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE 552
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
++ +M ++N+VP +L+ + + +D + + +++ G P+ + L++
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 419 GLCSRGQVHEAFECSKQMLERGRHMSAASFLML 451
++ EA+ + ML G H S ++ +L
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLL 645
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 136/322 (42%), Gaps = 11/322 (3%)
Query: 102 LTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L R + F + LL E R P+ +T + + + ++ ++ F +M+E
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRL---IHSYGRANYLKEAMNVFNQMQE--- 422
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTS 218
G E + L+ + A ++ +M + SPDT + ++++ ++G + +
Sbjct: 423 AGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ EMV +G +P+ VT+NI I + K + L+L +M+ F P T + ++
Sbjct: 483 AHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVME 542
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G +A +F E+ +N V D VY L+ ++ +++ A M++ +
Sbjct: 543 VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRP 602
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ T +++ +R + L Q M P +T +L+ C + R + +
Sbjct: 603 NVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTDARSNFDMGFC 661
Query: 399 NYLVE-KGYCPHAHALDLLITG 419
L+ G+ H L + G
Sbjct: 662 GQLMAVSGHPAHMFLLKMPPAG 683
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 102/256 (39%)
Query: 216 VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITT 275
++ FY + GF D TY + + +FG+ +LL+EM R P T
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNR 399
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
LIH G +A +FN++ D Y LI ++ ++ A+ + M E
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
+ D TY + L ++ + L+ +M + P T +++ + + +L
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
L+ + G+ P +++ L G + EA +M + + +L
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Query: 456 LQSGDIDKLKELDQMI 471
++G++DK + Q +
Sbjct: 580 GKAGNVDKAWQWYQAM 595
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 167/427 (39%), Gaps = 55/427 (12%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P+ + T+ + R +KA L+ + P+++T M I Y
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCM------IRGYCDLHRV 328
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNI 205
+ +E+ G + ++ C ++++ E R + KM PD + N
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
L+ + F + ++GF D + Y+ + CK+GR + L+ EM +
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 266 FVP-TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
P + T T +++G + KA++L + + +T Y AL+ + R+ A
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
+M+ E + +TY + GL R + ++ ++M + F P + +L++
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQS 568
Query: 385 -----------------------------------FCQNFRLDLSLSLWN--YLVEKGYC 407
FCQN LD +LS+ + YL+ K
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK--- 625
Query: 408 PHAHALDL--LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
HA L+ L +G++ EA E K+ML +G + ++ + Q G +D L
Sbjct: 626 -HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLV 684
Query: 466 E-LDQMI 471
L++MI
Sbjct: 685 AILEKMI 691
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 162/418 (38%), Gaps = 52/418 (12%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSI 133
+A + N L PP V++ ++ R+ DKA LLQ TH
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ-VMHTH----------- 483
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
G + T + LL C + EAR +
Sbjct: 484 ---------------------------GHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 516
Query: 194 SRF-SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
+ SP++ + ++++ G + G ++ EMV +GF P V N+ + + C+ GR
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ + +EE + + TT+IHG A + +++ N D Y L+
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
L + I A LM +M+ K ++ VTY T+ + ++ + + +KM R
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ-- 694
Query: 373 PQTRTVV-MLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
+ RT+ +++ C +L+ + +L ++ A L+ G +G A++
Sbjct: 695 -KCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYK 753
Query: 432 CSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPSKGHATGSS 489
+ +M R L + L+ G +D E D+++ L+ +GH + S
Sbjct: 754 VACRMFNRNLIPDVKMCEKLSKRLVLKGKVD---EADKLMLRLV-----ERGHISPQS 803
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 2/247 (0%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M + G P+ + N ID + + R LR LE M+ VP + T +I G +
Sbjct: 268 MQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI-EKRVELDGVTYH 344
+A +L ++ S+ + D Y ++ L + K I LM +M E + D VTY+
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYN 387
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T+ L + + + ++ F ++ C+ R+ + L N ++ K
Sbjct: 388 TLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSK 447
Query: 405 GYCP-HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
G+CP ++ G C G+V +A + + M G + S+ L + ++G +
Sbjct: 448 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 464 LKELDQM 470
+E+ M
Sbjct: 508 AREMMNM 514
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 2/248 (0%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
M +RG ++ + +Y + G+ D L++L M+R P + T I
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
KA + + +V + YN +I +E A+ L+++M K D V+Y+T
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRN-FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
+ L + I V +L +KMA+ + VP T L+ ++ D +L EK
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR-HMSAASFLMLERFLLQSGDIDK 463
G+ ++ LC G++ EA + +ML +G ++ + + G++DK
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 464 LKELDQMI 471
K+L Q++
Sbjct: 473 AKKLLQVM 480
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 17/329 (5%)
Query: 57 LVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLL- 115
+ N++ + S KAL +F + ++ P +F + ++ L+++ +A L
Sbjct: 117 VTHNIVLSAYKSGRQYSKALSYFEL-MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 116 ---QETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM-EEDVFVGREFGTDEFNV 171
++ A P ++T + I S + ++ R + E V G + +N
Sbjct: 176 SMREKRAECRPDVVTF-------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L+ A+ A SV G + PD S LL + S + + M K
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 288
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
P+ VTYN ID Y G + + + +ME+ P + ++ TL+ +
Sbjct: 289 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 348
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+ + SR + ++T YN+ I + + + ++E A++L M +K+V+ D VT+ + G
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 351 MR-STGIEGVSELYQKMAQRNFVPQTRTV 378
R S E +S Y K + +P T+ V
Sbjct: 409 CRMSKYPEAIS--YLKEMEDLSIPLTKEV 435
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 1/218 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ A+ S + EA +F +M P+ S+ LL S +V+
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 355
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
RG + + YN I +Y + L + M ++K T T LI G+ +
Sbjct: 356 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 415
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A E+ ++ + VY++++ A + + A S+ ++M E D + Y +M
Sbjct: 416 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 475
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
S EL+ +M P + LM+ F
Sbjct: 476 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 127/329 (38%), Gaps = 51/329 (15%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA--WMLLQE 117
N L +A H AL + + P VS+ L+ R R KA L+
Sbjct: 227 NALMGAYAVHGMSGTALSVLG-DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 285
Query: 118 TARTHPSLITLKAMSIMLSKIAKYQS---FEDTLDGFRRMEEDVFVGREFGTDEFNVLLK 174
R P+++T A+ I Y S + ++ FR+ME+D G + LL
Sbjct: 286 KERRKPNVVTYNAL------IDAYGSNGFLAEAVEIFRQMEQD---GIKPNVVSVCTLLA 336
Query: 175 AFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
A ++ +V SR + +T + N + + + ++ Y M K+
Sbjct: 337 ACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 396
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEME-------------------RRKFVPTIETI- 273
D+VT+ I I C+ ++ + + L+EME ++ V E+I
Sbjct: 397 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 456
Query: 274 ---------------TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
T+++H + GKA +LF E+ + + D+ +AL+ A +
Sbjct: 457 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 516
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ LMD M EK + G + +F
Sbjct: 517 GQPSNVFVLMDLMREKEIPFTGAVFFEIF 545
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYH 224
+ ++ L+ A Q + A ++ M+ + +P + N L+ SG+
Sbjct: 46 AETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCK 105
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGR-FGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+M G PD VT+NI + Y K GR + L E M+ K P T +I+ +
Sbjct: 106 KMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 284 QNAGKARQLFNEIPSRNLVV--DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ +A LFN + + D + +++ +IE+ ++ + M+ + ++ + V
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 224
Query: 342 TYHTMFLGLMRSTGIEGVS-ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
+Y+ + +G G+ G + + + Q +P + L+ + ++ + + ++
Sbjct: 225 SYNAL-MGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM 283
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ ++ P+ + LI S G + EA E +QM + G
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 103/253 (40%), Gaps = 2/253 (0%)
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
+ EM K PD TY+ I+ + + G++ + L+++M R P+ T LI+ G
Sbjct: 33 LFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACG 92
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
N +A ++ ++ + D +N +++A + ALS + M +V D
Sbjct: 93 SSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT 152
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQR--NFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
T++ + L + +L+ M ++ P T +M + ++ +++
Sbjct: 153 TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFE 212
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+V +G P+ + + L+ G A + + G S+ L +S
Sbjct: 213 AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSR 272
Query: 460 DIDKLKELDQMIK 472
K KE+ M++
Sbjct: 273 QPGKAKEVFLMMR 285
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 1/231 (0%)
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEM-VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
KS N L + D+ ++ F H+ K G D V++NI I ++C+ G +
Sbjct: 141 VKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAM 200
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
EME+ P + T TTLI + L+N + + + +N I L+
Sbjct: 201 REMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNR 260
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
+ A L+ M + +VE D +TY+ + G + + +Y M + + P +
Sbjct: 261 RRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIY 320
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
++ Y C+ DL+ ++ + K + P+ +++L+ GL +GQ+ +A
Sbjct: 321 QTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 96/224 (42%), Gaps = 7/224 (3%)
Query: 163 EFGTD----EFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVT 217
++G D FN+ +K+FC + A +M S +PD + L+ +
Sbjct: 170 KYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCV 229
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI 277
++ MV +G P+ T+N+RI + R D LL M + + P T +I
Sbjct: 230 IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVE 337
G + + A +++ + + + +Y +I L ++ + + A ++ + + K+
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 338 LDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
+ T + GL++ ++ + + + +R VP R+ +L
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR--VPPFRSKQLL 391
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 17/329 (5%)
Query: 57 LVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLL- 115
+ N++ + S KAL +F + ++ P +F + ++ L+++ +A L
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFEL-MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 116 ---QETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM-EEDVFVGREFGTDEFNV 171
++ A P ++T + I S + ++ R + E V G + +N
Sbjct: 308 SMREKRAECRPDVVTF-------TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 172 LLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG 230
L+ A+ A SV G + PD S LL + S + + M K
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER 420
Query: 231 FSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
P+ VTYN ID Y G + + + +ME+ P + ++ TL+ +
Sbjct: 421 RKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVD 480
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+ + SR + ++T YN+ I + + + ++E A++L M +K+V+ D VT+ + G
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 351 MR-STGIEGVSELYQKMAQRNFVPQTRTV 378
R S E +S Y K + +P T+ V
Sbjct: 541 CRMSKYPEAIS--YLKEMEDLSIPLTKEV 567
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 1/218 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ A+ S + EA +F +M P+ S+ LL S +V+
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQ 487
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
RG + + YN I +Y + L + M ++K T T LI G+ +
Sbjct: 488 SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYP 547
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A E+ ++ + VY++++ A + + A S+ ++M E D + Y +M
Sbjct: 548 EAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML 607
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
S EL+ +M P + LM+ F
Sbjct: 608 HAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 127/329 (38%), Gaps = 51/329 (15%)
Query: 60 NVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKA--WMLLQE 117
N L +A H AL + + P VS+ L+ R R KA L+
Sbjct: 359 NALMGAYAVHGMSGTALSVLG-DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 118 TARTHPSLITLKAMSIMLSKIAKYQS---FEDTLDGFRRMEEDVFVGREFGTDEFNVLLK 174
R P+++T A+ I Y S + ++ FR+ME+D G + LL
Sbjct: 418 KERRKPNVVTYNAL------IDAYGSNGFLAEAVEIFRQMEQD---GIKPNVVSVCTLLA 468
Query: 175 AFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
A ++ +V SR + +T + N + + + ++ Y M K+
Sbjct: 469 ACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 528
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEME-------------------RRKFVPTIETI- 273
D+VT+ I I C+ ++ + + L+EME ++ V E+I
Sbjct: 529 DSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIF 588
Query: 274 ---------------TTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
T+++H + GKA +LF E+ + + D+ +AL+ A +
Sbjct: 589 NQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG 648
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ LMD M EK + G + +F
Sbjct: 649 GQPSNVFVLMDLMREKEIPFTGAVFFEIF 677
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 133/336 (39%), Gaps = 10/336 (2%)
Query: 146 DTLDGFRRMEE-----DVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG--KMVSRFSP 198
D L R EE + +VGR F F VL++ + ++ +VF K+ +
Sbjct: 83 DRLMALNRWEEVDGVLNSWVGR-FARKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCA 141
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
N+++ V + EM K PD TY+ I+ + + G++ + L+
Sbjct: 142 RNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
++M R P+ T LI+ G N +A ++ ++ + D +N +++A
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR--NFVPQTR 376
+ ALS + M +V D T++ + L + +L+ M ++ P
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
T +M + ++ +++ +V +G P+ + + L+ G A +
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+ G S+ L +S K KE+ M++
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 34/206 (16%)
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVEL 221
+ T +N+++ C + EA ++F + +S PD ++ N +++ F G E
Sbjct: 11 DMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFSSLG---RAEK 66
Query: 222 FYHEMVKRGFSPDNVTYN--------------------------IRIDTYCKKGRFGDGL 255
Y EM++RG PD +TYN I+ YCK R DG+
Sbjct: 67 LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGM 126
Query: 256 RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
L EM RR V + T TTLIHG V + A +F E+ S + + + ++ L
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186
Query: 316 LRSKDIESALSLM---DEMIEKRVEL 338
K++ A++++ M+ V L
Sbjct: 187 CSRKELRKAVAMLLQKSSMVSNNVTL 212
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 78/193 (40%), Gaps = 13/193 (6%)
Query: 194 SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
S DT NI++ G ++G + ++ G PD TYN+ I + G
Sbjct: 8 SNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGR 63
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
+L EM RR VP T ++IHG +AR++ + +N LI
Sbjct: 64 AEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCST---------FNTLIN 114
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
++ ++ ++L EM + + + +TY T+ G + +++Q+M
Sbjct: 115 GYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS 174
Query: 374 QTRTVVMLMKYFC 386
+ T ++ C
Sbjct: 175 SSITFRDILPQLC 187
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 114/254 (44%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+T + N L+ + + + +++M + G PD VTY ID + K G + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+ M+ P T + +I+ G + A +LF E+ + + YN ++ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+++ ++AL L +M E D VTY + L +E ++ +M Q+N++P
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+ + + ++ + + ++ G P+ + L++ ++ EA+E + ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 438 ERGRHMSAASFLML 451
G S ++ +L
Sbjct: 637 ALGLRPSLQTYTLL 650
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 11/322 (3%)
Query: 102 LTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L R + F LL E R P+ +T + + + + ++ F +M+E
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL---IHSYGRANYLNEAMNVFNQMQE--- 427
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTS 218
G + + L+ + A ++ +M SPDT + ++++ ++G + +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ EMV +G +P+ VTYNI +D + K + + L+L +M+ F P T + ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G +A +F E+ +N + D VY L+ ++ ++E A M+ +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ T +++ +R I EL Q M P +T +L+ C + R L +
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFC 666
Query: 399 NYLVEK-GYCPHAHALDLLITG 419
L+ G+ H L + G
Sbjct: 667 GQLMASTGHPAHMFLLKMPAAG 688
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 17/312 (5%)
Query: 180 RQMKEARSVFG-----KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
+QM + + G K F D + ++ + ++ EMV+ G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG---KARQ 291
VTYN I +Y + + + + +M+ P T TLI I AG A
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID---IHAKAGFLDIAMD 455
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ + + L DT Y+ +I L ++ + +A L EM+++ + VTY+ M
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
++ + +LY+ M F P T ++M+ L+ + +++ + +K + P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG-RHMSAASFLMLERFLLQSGDIDKLKELDQM 470
LL+ G V +A++ + ML G R +L FL ++K+ E ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL----RVNKIAEAYEL 631
Query: 471 IKNLLSV-LPPS 481
++N+L++ L PS
Sbjct: 632 LQNMLALGLRPS 643
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 114/254 (44%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+T + N L+ + + + +++M + G PD VTY ID + K G + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+ M+ P T + +I+ G + A +LF E+ + + YN ++ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+++ ++AL L +M E D VTY + L +E ++ +M Q+N++P
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+ + + ++ + + ++ G P+ + L++ ++ EA+E + ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 438 ERGRHMSAASFLML 451
G S ++ +L
Sbjct: 637 ALGLRPSLQTYTLL 650
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 11/322 (3%)
Query: 102 LTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L R + F LL E R P+ +T + + + + ++ F +M+E
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL---IHSYGRANYLNEAMNVFNQMQE--- 427
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTS 218
G + + L+ + A ++ +M SPDT + ++++ ++G + +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ EMV +G +P+ VTYNI +D + K + + L+L +M+ F P T + ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G +A +F E+ +N + D VY L+ ++ ++E A M+ +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ T +++ +R I EL Q M P +T +L+ C + R L +
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFC 666
Query: 399 NYLVEK-GYCPHAHALDLLITG 419
L+ G+ H L + G
Sbjct: 667 GQLMASTGHPAHMFLLKMPAAG 688
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 17/312 (5%)
Query: 180 RQMKEARSVFG-----KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
+QM + + G K F D + ++ + ++ EMV+ G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG---KARQ 291
VTYN I +Y + + + + +M+ P T TLI I AG A
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID---IHAKAGFLDIAMD 455
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ + + L DT Y+ +I L ++ + +A L EM+++ + VTY+ M
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
++ + +LY+ M F P T ++M+ L+ + +++ + +K + P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG-RHMSAASFLMLERFLLQSGDIDKLKELDQM 470
LL+ G V +A++ + ML G R +L FL ++K+ E ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL----RVNKIAEAYEL 631
Query: 471 IKNLLSV-LPPS 481
++N+L++ L PS
Sbjct: 632 LQNMLALGLRPS 643
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 114/254 (44%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
P+T + N L+ + + + +++M + G PD VTY ID + K G + +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+ M+ P T + +I+ G + A +LF E+ + + YN ++ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+++ ++AL L +M E D VTY + L +E ++ +M Q+N++P
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+ + + ++ + + ++ G P+ + L++ ++ EA+E + ML
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 438 ERGRHMSAASFLML 451
G S ++ +L
Sbjct: 637 ALGLRPSLQTYTLL 650
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 135/322 (41%), Gaps = 11/322 (3%)
Query: 102 LTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVF 159
L R + F LL E R P+ +T + + + + ++ F +M+E
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL---IHSYGRANYLNEAMNVFNQMQE--- 427
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTS 218
G + + L+ + A ++ +M SPDT + ++++ ++G + +
Sbjct: 428 AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPA 487
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
+ EMV +G +P+ VTYNI +D + K + + L+L +M+ F P T + ++
Sbjct: 488 AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME 547
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G +A +F E+ +N + D VY L+ ++ ++E A M+ +
Sbjct: 548 VLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRP 607
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
+ T +++ +R I EL Q M P +T +L+ C + R L +
Sbjct: 608 NVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKLDMGFC 666
Query: 399 NYLVEK-GYCPHAHALDLLITG 419
L+ G+ H L + G
Sbjct: 667 GQLMASTGHPAHMFLLKMPAAG 688
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 17/312 (5%)
Query: 180 RQMKEARSVFG-----KMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPD 234
+QM + + G K F D + ++ + ++ EMV+ G P+
Sbjct: 339 KQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 235 NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG---KARQ 291
VTYN I +Y + + + + +M+ P T TLI I AG A
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLID---IHAKAGFLDIAMD 455
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
++ + + L DT Y+ +I L ++ + +A L EM+++ + VTY+ M
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
++ + +LY+ M F P T ++M+ L+ + +++ + +K + P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 412 ALDLLITGLCSRGQVHEAFECSKQMLERG-RHMSAASFLMLERFLLQSGDIDKLKELDQM 470
LL+ G V +A++ + ML G R +L FL ++K+ E ++
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL----RVNKIAEAYEL 631
Query: 471 IKNLLSV-LPPS 481
++N+L++ L PS
Sbjct: 632 LQNMLALGLRPS 643
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 22/307 (7%)
Query: 84 HHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQS 143
HH + + L I+ R D W L QE + L+ K I+L +A +
Sbjct: 104 HHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKR--GLVNDKTFRIVLKTLASARE 161
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSM 203
+ ++ F M G + + N ++ C ++ ++EA+ VF K+ PD +
Sbjct: 162 LKKCVNYFHLMNG---FGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITY 218
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
++ GF + GD+ ++ M+ GF D ++T KK +F + ++ M
Sbjct: 219 RTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVS 278
Query: 264 RK-------FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
++ F + I L I AR++F+E+ R + VD + +LI LL
Sbjct: 279 KRGGDLDGGFYRVM--IDWLCKNGRI----DMARKVFDEMRERGVYVDNLTWASLIYGLL 332
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
+ + A L++ + + + YH + GL++ +E+++KM QR P
Sbjct: 333 VKRRVVEAYGLVEGVENPDISI----YHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMH 388
Query: 377 TVVMLMK 383
T +ML++
Sbjct: 389 TYLMLLQ 395
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 27/261 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+NV++K + R + +AR +F M R D S N +L G+ ++G V + M +
Sbjct: 129 WNVMIKGYVRNRNLGKARELFEIMPER---DVCSWNTMLSGYAQNGCVDDARSVFDRMPE 185
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
+ ++V++N + Y + + + L + E V + + IV+
Sbjct: 186 K----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE---- 237
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
ARQ F+ + R++V +N +IT +S I+ A L DE + D T+ M
Sbjct: 238 ARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVS 289
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
G +++ +E EL+ KM +RN V ML Y Q R++++ L++ + C
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWN---AMLAGYV-QGERMEMAKELFDVMP----CR 341
Query: 409 HAHALDLLITGLCSRGQVHEA 429
+ + +ITG G++ EA
Sbjct: 342 NVSTWNTMITGYAQCGKISEA 362
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 137/340 (40%), Gaps = 61/340 (17%)
Query: 130 AMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVF 189
+ + MLS A+ +D F RM E V +N LL A+ +M+EA +F
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-------SWNALLSAYVQNSKMEEACMLF 211
Query: 190 GKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
SR + S N LL GF + + F+ M R D V++N I Y + G
Sbjct: 212 K---SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSG 264
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN--AGKARQLFNEIPSRNLVVDTGV 307
+ + +L +E P + T +G +QN +AR+LF+++P RN V
Sbjct: 265 KIDEARQLFDE------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS---- 314
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
+NA++ ++ + +E A L D M + V T++TM G + I L+ KM
Sbjct: 315 WNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMP 370
Query: 368 QRNFVPQTRTVVML---------MKYFCQNFR----------------------LDLSLS 396
+R+ V + ++ F Q R L+L
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
L LV+ GY + L+ C G + EA + K+M
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 25/218 (11%)
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNIL 206
+L+G +R + G F+ L +A +Q Q + + ++ D K N+
Sbjct: 20 SLNGLKRRCNNAH-----GAANFHSLKRATQTQIQKSQTKP----LLKCGDSDIKEWNVA 70
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
+ + +G + M + +V+YN I Y + G F +L +EM R
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMPERDL 126
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
V + +I G +N GKAR+LF +P R D +N +++ ++ ++ A S
Sbjct: 127 V----SWNVMIKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARS 178
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQ 364
+ D M EK + V+++ + ++++ +E L++
Sbjct: 179 VFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFK 212
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 161/412 (39%), Gaps = 33/412 (8%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDT 147
P +++ L +R D A + + E R P L T AM + +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--------- 345
Query: 148 LDGFRRMEEDVFVGRE---FGTDE--FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTK 201
G E +F+ E F D +N LL AF +R ++ + V+ +M F D
Sbjct: 346 --GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 202 SMNILLLGFKESGDVTSVELFYHEMVK-RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
+ N ++ + + G + Y +M G +PD +TY + ID+ K R + L+ E
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M PT++T + LI G +A F+ + D Y+ ++ LLR +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
A L +MI Y M LGLM+ + + + + M + + +
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
L+K C DL+ + GY L ++ S G+ EAFE + + E
Sbjct: 584 LVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKE-- 637
Query: 441 RHMSAASFLMLERFLLQSGDIDKLK-ELDQMIKNLLSVLPPSKGHATGSSNL 491
H S + L+ E ++ ++ L LD+ + P G GSS +
Sbjct: 638 -HASGSKRLITEALIVLHCKVNNLSAALDEYFAD-----PCVHGWCFGSSTM 683
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 141/309 (45%), Gaps = 7/309 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +++A+ Q+ ++A SV G + S +PD K+ N L+ + + G ++ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G SP + NI + C GR + ++EE++ F + +I ++ N
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+ +++++ + + + +Y +I L + K + A ++ EM E +++ +++M
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM- 933
Query: 348 LGLMRSTGIEGVS---ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
L T IE ++YQ++ + P T L+ +C++ R + L +
Sbjct: 934 --LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
G P LI+ + + +A + +++L +G + + + + + SG K
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 465 KELDQMIKN 473
++L QM+KN
Sbjct: 1052 EKLLQMMKN 1060
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 12/303 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVT---SVELFYH 224
+N ++ + + +A+ + M R PD S N L+ +SG +T +VEL
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL-- 285
Query: 225 EMVKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+MV+ G PD +TYN + + +++ E+ME + P + T +I G
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
A +A +LF E+ + D YN+L+ A R ++ E + +M + D +TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 344 HTMFLGLMRSTGIEGVSELYQKM---AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
+T+ + ++ +LY+ M + RN P T +L+ + R + +L +
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+++ G P LI G G+ EA + ML G ++ ++ LL+ +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 461 IDK 463
K
Sbjct: 524 TRK 526
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 123/305 (40%), Gaps = 45/305 (14%)
Query: 115 LQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLK 174
L+++ RT LK + ++S A+ +E F M D G + N+LL
Sbjct: 778 LRQSGRTP----DLKTWNSLMSAYAQCGCYERARAIFNTMMRD---GPSPTVESINILLH 830
Query: 175 AFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
A C +++E V ++ F S+ ++L F +G++ V+ Y M G+ P
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
Y + I+ CK R D ++ EME F + +++ +++ K Q++
Sbjct: 891 TIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVY 950
Query: 294 NEIPSRNLVVDTGVYN-----------------------------------ALITALLRS 318
I L D YN +LI+A +
Sbjct: 951 QRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQ 1010
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE-LYQKMAQRNFVPQTRT 377
K +E A L +E++ K ++LD YHTM + + R +G + +E L Q M P T
Sbjct: 1011 KCLEQAEQLFEELLSKGLKLDRSFYHTM-MKISRDSGSDSKAEKLLQMMKNAGIEPTLAT 1069
Query: 378 VVMLM 382
+ +LM
Sbjct: 1070 MHLLM 1074
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ ++++ C +++++A + +M + F + N +L + D Y +
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
+ G PD TYN I YC+ R +G L+++M P ++T +LI G +
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLE 1014
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A QLF E+ S+ L +D Y+ ++ S A L+ M +E T H +
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 348 L 348
+
Sbjct: 1075 V 1075
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 127/309 (41%), Gaps = 33/309 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ A C ++ E R + ++ F D + + G+ + G + + EMV
Sbjct: 210 YTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMV 269
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G + D V+Y+I ID K+G + L LL +M + P + T T +I G +
Sbjct: 270 EKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM---------------- 331
+A LFN I S + VD +Y LI + R ++ A S++ +M
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 332 --------------IEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
+ K V D +TY T+ ++ I+ V E+ ++ +
Sbjct: 390 NGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVM 449
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+L+K F + +L+ + E P +I G C GQ+ EA E ++
Sbjct: 450 CNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL- 508
Query: 438 ERGRHMSAA 446
R +SAA
Sbjct: 509 -RKSSVSAA 516
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 198 PDTKSMNILLLGFKESGD----VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
P + + L+ F E G+ + +E+ ++ V F DN + I +CK G+
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPF--DNFVCSAVISGFCKIGKPEL 189
Query: 254 GLRLLEE-MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
L E ++ VP + T TTL+ + + R L + D Y+ I
Sbjct: 190 ALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWI 249
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
+ + AL EM+EK + D V+Y + GL + +E L KM +
Sbjct: 250 HGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE 309
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P T +++ C+ +L+ + L+N ++ G LI G+C +G ++ AF
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 433 SKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
M +RG S ++ + L +G + + E+ +
Sbjct: 370 LGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSV 219
G T +N L+ C Q + EA +F + + P + IL+ + G
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
E MV +G P+ + YN +D YCK G+ D +R++ + P T++++I G
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+ +A +F E +N+ D + LI +E A L+ EM+
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 20/312 (6%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
N+LLKAF EA +++ M +PDT + ++ G+ ++G + ++E+ K
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
S V YN ID CKKG +L E+ + I T TL+H I N G
Sbjct: 511 SSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLH--SIHANGGD 567
Query: 289 AR--QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
L + N V G+ N I L + E+A+ + MI +R L VT+ +
Sbjct: 568 KGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVY--MIMRRKGLT-VTFPST 624
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY------FCQNFRLDLSLSLWNY 400
L T ++ + L + N T + + ++ Y C+ L +L+L ++
Sbjct: 625 IL----KTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSF 680
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG- 459
+G + + LI GLC +G + EA + G S ++ +L L + G
Sbjct: 681 AKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGL 740
Query: 460 DIDKLKELDQMI 471
+D K LD M+
Sbjct: 741 FLDAEKLLDSMV 752
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 15/232 (6%)
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
RG + + +TYN I+ C++G + LRL + +E VP+ T LI
Sbjct: 684 RGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLD 743
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A +L + + S+ LV + +YN+++ + E A+ ++ + RV D T +M
Sbjct: 744 AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIK 803
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW-NYLVEKGYC 407
G + +E ++ + +N + L+K FC R++ + L LV +
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVV 863
Query: 408 PHAHALDL----------LITGLCSRGQVHEAF----ECSKQMLERGRHMSA 445
+ +D + LC +G+V +A E S + G+++ +
Sbjct: 864 KLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGS 915
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%)
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
S D + Y I I+ CK+G L L + R T +LI+G +A +
Sbjct: 652 SMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALR 711
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
LF+ + + LV Y LI L + A L+D M+ K + + + Y+++ G
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC 771
Query: 352 RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAH 411
+ E + + P TV ++K +C+ ++ +LS++ +K
Sbjct: 772 KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 412 ALDLLITGLCSRGQVHEAFECSKQML 437
LI G C++G++ EA ++ML
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREML 857
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 166/442 (37%), Gaps = 90/442 (20%)
Query: 93 VSFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDG 150
VS+ + + L++ ++A LL + + P+LIT A+ L K+ K E+
Sbjct: 278 VSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK---LEEAFVL 334
Query: 151 FRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLG 209
F R+ + VG E + L+ C + + A S+ G M R P + N ++ G
Sbjct: 335 FNRI---LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 210 FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK---------------------- 247
+G V+ + V +G D +TY+ +D+Y K
Sbjct: 392 LCMAGRVSEAD-----EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 248 -------------KGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN 294
G +G+ L M P T T+I G +A ++FN
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
E+ ++ V YN +I AL + +++A ++ E+ EK + LD T T+ + +
Sbjct: 507 EL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG 565
Query: 355 GIEGVSELYQKMAQRN---FVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY----- 406
G +G+ L + Q N + ++L+ C+ + ++ ++ + KG
Sbjct: 566 GDKGILGLVYGLEQLNSDVCLGMLNDAILLL---CKRGSFEAAIEVYMIMRRKGLTVTFP 622
Query: 407 -------CPHAHALD----------------------LLITGLCSRGQVHEAFECSKQML 437
+ +LD ++I GLC G + +A
Sbjct: 623 STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 438 ERGRHMSAASFLMLERFLLQSG 459
RG ++ ++ L L Q G
Sbjct: 683 SRGVTLNTITYNSLINGLCQQG 704
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 105/284 (36%), Gaps = 3/284 (1%)
Query: 110 KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEF 169
K ++L++ R H + + ++ + + ++ ++ M V F
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNK-NVNYPFDNFVC 174
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ ++ FC + + A F V P+ + L+ + G V V +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
GF D V Y+ I Y K G D L EM + + + + LI G N
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A L ++ + + Y A+I L + +E A L + ++ +E+D Y T+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL 391
G+ R + + M QR P T ++ C R+
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 175 AFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSP 233
+ C + +++A V KM + R P ++ F + +V ++ + MV+RG P
Sbjct: 565 SLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIP 624
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI----------HGAGIV 283
D TY I I TYC+ L E+M++R P + T T L+ H V
Sbjct: 625 DLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 284 Q---NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
Q KA ++ E + + +D Y LI + ++E A L D MI+ +E D
Sbjct: 685 QGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDM 744
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
V Y T+ R I+ L +++++ +P
Sbjct: 745 VAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 160/390 (41%), Gaps = 42/390 (10%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLL--QETARTHPSLI--------TLKAMSIMLSKIA 139
+ ++ + + L R ++A MLL E+ + + I T KA++++L I
Sbjct: 214 ANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELID 273
Query: 140 -KYQSFED-------TLDGF-----RRMEEDVFVGRE---FGTDEFNVL--LKAFCSQRQ 181
KY + +D + GF + E V + E FG D + L + +C
Sbjct: 274 RKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMN 333
Query: 182 MKEARSVFGKMVSR-FSPDTKSMNILLLGF-KESGDVTSVELFYHEMVKRGFSPDNVTYN 239
+ EA KM+ + + ++++L + K + ++E F E D V YN
Sbjct: 334 LPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF-KEFRDMNIFLDRVCYN 392
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
+ D K GR + LL+EM+ R VP + TTLI G + A L +E+
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
+ D YN L++ L R+ E L + + M + + + VT + GL + ++
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
+ + + Q+ P+ + +K +C+ LS + V Y L
Sbjct: 513 EDFFSSLEQK--CPENKA--SFVKGYCEA---GLSKKAYKAFVRLEYPLRKSVYIKLFFS 565
Query: 420 LCSRGQVHEAFECSKQM----LERGRHMSA 445
LC G + +A + K+M +E GR M
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 131/327 (40%), Gaps = 22/327 (6%)
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG 190
M + L + K++ F D ++F+ R +NV A +++EA +
Sbjct: 366 MDMCLEALEKFKEFRDM---------NIFLDRVC----YNVAFDALSKLGRVEEAFELLQ 412
Query: 191 KMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
+M R PD + L+ G+ G V EM+ G SPD +TYN+ + + G
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ L + E M+ P T + +I G + +A F+ + +
Sbjct: 473 HEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVK 532
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
A L SK A ++ + K V Y +F L +E ++ +KM+
Sbjct: 533 GYCEAGL-SKKAYKAFVRLEYPLRKSV------YIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
P ++ FC+ + + L++ +VE+G P ++I C ++ +A
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA 645
Query: 430 FECSKQMLERGRHMSAASF-LMLERFL 455
+ M +RG ++ ++L+R+L
Sbjct: 646 ESLFEDMKQRGIKPDVVTYTVLLDRYL 672
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/343 (18%), Positives = 146/343 (42%), Gaps = 12/343 (3%)
Query: 108 FDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD 167
FD+A +L ++ R ++ +KA + +++++ ++ + F+++++ E+
Sbjct: 162 FDEATDVLFQSKRLD-CVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEY--- 217
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +++KA C + ++EA + + S F T + G +G+ E++
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLLIENESVFGYKT-----FINGLCVTGETEKAVALILELI 272
Query: 228 KRGF-SPDNV--TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
R + + D++ + + +C + + ++ EME F + +I
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
N +A +++ + L V+ + + ++ + AL E + + LD V Y+
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYN 392
Query: 345 TMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
F L + +E EL Q+M R VP L+ +C ++ +L L + ++
Sbjct: 393 VAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN 452
Query: 405 GYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
G P ++L++GL G E E ++M G +A +
Sbjct: 453 GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVT 495
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
Y + +G+ + +Y++ I CK GR + L+EM++ P + LI
Sbjct: 385 YELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCK 444
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+ A++L++E+ ++ YN LI L + E +L L D+M+E+ +E D
Sbjct: 445 AEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETI 504
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
Y ++ GL + T IE E+++K +R+ TR V+
Sbjct: 505 YMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVL 541
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 11/282 (3%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
+ ++ + S +++ EA+ V +VS P + L+G + D S F
Sbjct: 293 SSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVY 352
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
MV G P T + C+ + ++ E + + + +++ + +I +
Sbjct: 353 MVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI---SFLCK 409
Query: 286 AGKARQLF---NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
AG+ R+ + E+ L D +YNALI A +++ I A L DEM + +++ T
Sbjct: 410 AGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTT 469
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y+ + L E L+ KM +R P + L++ C+ +++ ++ ++ +
Sbjct: 470 YNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCM 529
Query: 403 EKGY-CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
E+ + L + LCS G EA Q+L H+
Sbjct: 530 ERDHKTVTRRVLSEFVLNLCSNGHSGEA----SQLLREREHL 567
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 159/424 (37%), Gaps = 77/424 (18%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
IS SLV V+ +H + AL FFN+ +S+ L+ R F
Sbjct: 45 ISPSLVARVIDPFLLNHHS--LALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMD 102
Query: 113 MLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVL 172
L ++ +K+ I+L + Y+S DTL +GR+ F VL
Sbjct: 103 ALFKQ----------VKSNKILLDS-SVYRSLIDTL----------VLGRK-AQSAFWVL 140
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
+AF + +++ PD N LL G G + + +M +G S
Sbjct: 141 EEAFSTGQEIH--------------PDV--CNRLLAGLTSDGCYDYAQKLFVKMRHKGVS 184
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI-HGAGIVQNAGKARQ 291
+ + + + I +C+ LRL++E+++ I LI H A
Sbjct: 185 LNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFY 244
Query: 292 LFNEIPS-------------------------RNLVVDT----GV------YNALITALL 316
+ E+ + R +V+ GV Y A I L+
Sbjct: 245 ILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLI 304
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
+K + A + + ++ + +D + +G + + + E M +P R
Sbjct: 305 SAKRLTEAKEVAEVIVSGKFPMDNDILDAL-IGSVSAVDPDSAVEFLVYMVSTGKLPAIR 363
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
T+ L K C++ + D + + L KGY + L+I+ LC G+V E++ ++M
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
Query: 437 LERG 440
+ G
Sbjct: 424 KKEG 427
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 42/319 (13%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSV 219
G T FN ++ + + EA S+ KM + SPDTK+ NILL ++GD+ +
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF------VPTIETI 273
+Y ++ K G PD VT+ + C++ + ++ EM+R VP I +
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQM 454
Query: 274 -------------------------TTLIHGAGIVQNAG---KARQLF----NEIPSRNL 301
TTL + G +A +F N RN
Sbjct: 455 YVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
V++ YN +I A ++K E ALSL M + D TY+++F L ++
Sbjct: 515 VLE---YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
+ +M P +T ++ + + L ++ L+ + + G P+ LI G
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 422 SRGQVHEAFECSKQMLERG 440
G V EA + + M E G
Sbjct: 632 ESGMVEEAIQYFRMMEEHG 650
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 11/298 (3%)
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEM 226
E+NV++KA+ + ++A S+F M ++ + PD + N L V + EM
Sbjct: 517 EYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM 576
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIV 283
+ G P TY I +Y + G D + L E ME+ P +LI+G +G+V
Sbjct: 577 LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMV 636
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
+ +A Q F + + + V +LI A + +E A + D+M + D
Sbjct: 637 E---EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 344 HTMFLGLMRSTGIEGVSE-LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
++M L L GI +E ++ + ++ M+ Y LD ++ + +
Sbjct: 694 NSM-LSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGM-LDEAIEVAEEMR 751
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML-ERGRHMSAASFLMLERFLLQSG 459
E G + + ++ + GQ+ E E +ML ER + +F L L + G
Sbjct: 752 ESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 105/288 (36%), Gaps = 55/288 (19%)
Query: 196 FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGL 255
+ P+ NI+L +G + L + EM G P N TY + +D Y K G + L
Sbjct: 141 YVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEAL 200
Query: 256 RLLEEMERRKFVP---TIETITTLIHGAGIVQNA-------------------------G 287
++ M +R P T+ T+ + +G A G
Sbjct: 201 LWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNG 260
Query: 288 KARQLFN----------EIPSRNLVVD-----------------TGVYNALITALLRSKD 320
A+ N ++ +RN + T +N LI ++
Sbjct: 261 SAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGR 320
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
+ A +L EM++ V +D VT++TM + L +KM ++ P T+T +
Sbjct: 321 LNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHE 428
L+ ++ +L + + + G P ++ LC R V E
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT--TLIHGAGIVQNAGKARQLFN 294
T+N ID Y K GR D L EM + VP I+T+T T+IH G + +A L
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEM-LKSGVP-IDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 295 EIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST 354
++ + + DT YN L++ + DIE+AL ++ + + D VT+ + L +
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 355 GIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC------------QNFRLDLSLS 396
+ V + +M + + +V ++M+ + + F+LD LS
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLS 478
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 137/346 (39%), Gaps = 37/346 (10%)
Query: 129 KAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSV 188
K + + ++ + + D F +ME D + R+ + +++K C + A +
Sbjct: 176 KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRD--KESLTLVVKKLCEKGHASIAEKM 233
Query: 189 FGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
+ PD ++L+ G+ + + EM + GF YN+ +D CK
Sbjct: 234 VKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKL 293
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
R D +L E+E+ + E+ R + +T +
Sbjct: 294 CRKKDPFKLQPEVEK----------------------------VLLEMEFRGVPRNTETF 325
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
N LI L + + E A++L M E + D TY + L ++ I E+ KM
Sbjct: 326 NVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKS 385
Query: 369 RNF--VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+ + + +K C RL+ ++S++ + G P DLL+ +C+ Q+
Sbjct: 386 AGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQL 445
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
A K+ ++G +S + + RF+ + K KE+D +K
Sbjct: 446 TRANGLYKEAAKKGIAVSPKEYRVDPRFMKK-----KTKEVDSNVK 486
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 5/228 (2%)
Query: 153 RMEEDVFVGREFG----TDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILL 207
R E +F +FG + FN +L S + E +F D +NIL+
Sbjct: 150 RAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILI 209
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G ESG++ + E ++ P+ +T++ I +C KG+F + +LLE ME+ +
Sbjct: 210 KGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIE 269
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P T LI G + L + + + G Y ++ LL K A +
Sbjct: 270 PDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEM 329
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT 375
M +MI + ++Y M LGL + + + + ++M FVP+T
Sbjct: 330 MSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKT 377
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 108/261 (41%), Gaps = 1/261 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ AF + ++A +F ++ PD N L+ + +G + M
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD +YNI +D Y + G D + EEM+R PT+++ L+ ++
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
K + E+ + DT V N+++ R ++ EM D TY+ +
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
++ +E + EL+ ++ ++NF P T + + + L ++ +++ G
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 408 PHAHALDLLITGLCSRGQVHE 428
P +L++ S QV +
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQ 562
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 35/347 (10%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
I ++ + L N +A++ F + + P+ ++ + +++ + +W
Sbjct: 226 IGVTVYNAYIEGLMKRKGNTEEAIDVFQ-RMKRDRCKPTTETYNLMINLYGKASKSYMSW 284
Query: 113 MLLQETARTH---PSLITLKAMSIMLSKIAKYQSFEDTLDGFRR--MEEDVFV------- 160
L E R+H P++ T A+ ++ + E+ + + +E DV+V
Sbjct: 285 KLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 161 ----GREFGTDE----------------FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPD 199
G +G E +N+++ A+ +A +VF +M +P
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
KS +LL + ++ DVT E EM + G PD N ++ Y + G+F ++L
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
EME I T LI+ G + +LF E+ +N D + + I A R K
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 523
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
L + +EMI+ DG T + +E V+ + + M
Sbjct: 524 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 163/391 (41%), Gaps = 19/391 (4%)
Query: 89 PPSHVSFEMTLHILTRMRYFDKAW---MLLQE----TARTHPSLITLKAMSIMLSKIAKY 141
P +H S++ +++ ++R +K W +L+ E + P +I + + +Y
Sbjct: 113 PSTHASWDDLINVSVQLR-LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQY 171
Query: 142 QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDT 200
+ E + ++ E +V E D + +L+KA+C ++ A V +M + SP T
Sbjct: 172 KEAESL---YVQLLESRYVPTE---DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKT 225
Query: 201 KSM---NILLLGF-KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
+ N + G K G+ + M + P TYN+ I+ Y K + +
Sbjct: 226 IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK 285
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L EM + P I T T L++ KA ++F ++ L D VYNAL+ +
Sbjct: 286 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 345
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
R+ A + M E D +Y+ M R+ ++++M + P +
Sbjct: 346 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+ ++L+ + + + ++ + E G P L+ ++ GQ + + +M
Sbjct: 406 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 465
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+++ +L ++G +++++EL
Sbjct: 466 ENGPCTADISTYNILINIYGKAGFLERIEEL 496
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 112/255 (43%), Gaps = 8/255 (3%)
Query: 185 ARSVFGKMVSRFSPDTK----SMNILLLGFKESGDVTSVELFYHEMV-KRGFSPDNVTYN 239
A+ VF +M +R D K S N LL ++ S VE ++E+ K PD V+YN
Sbjct: 128 AQKVFEEMPNR---DCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSR 299
I C+K + + LL+E+E + P I T TL+ + + +++ ++ +
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244
Query: 300 NLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGV 359
N+ +D YNA + L + ++L E+ ++ D +++ M G + ++
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 360 SELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITG 419
Y+++ + + P T +L+ C+ + ++ L+ K Y L L+
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 420 LCSRGQVHEAFECSK 434
L + EA E K
Sbjct: 365 LVKGSKREEAEEIVK 379
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 42/253 (16%)
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
Y +M K GF+ ++ Y K G F + ++ EEM R ++ + L+ +
Sbjct: 103 YRDMSKEGFAARIISL------YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRL 156
Query: 283 VQNAGKARQLFNEIPSR-NLVVDTGVYNALITALLRSKDIESALSLMDE----------- 330
+ +LFNE+P + ++ D YN LI AL + A++L+DE
Sbjct: 157 SKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV 216
Query: 331 ------------------------MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
M+EK V +D TY+ LGL + + L+ ++
Sbjct: 217 TFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 367 AQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
P + +++ ++D + + + +V+ GY P LL+ +C G
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 427 HEAFECSKQMLER 439
A E K+ +
Sbjct: 337 ESAIELFKETFSK 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+KA C + + EA ++ ++ ++ PD + N LLL G E + +MV
Sbjct: 183 YNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMV 242
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++ + D TYN R+ + + + + L E++ P + + +I G+
Sbjct: 243 EKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMD 302
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+A + EI D + L+ A+ ++ D ESA+ L E KR + T +
Sbjct: 303 EAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Query: 348 LGLMRSTGIEGVSELYQKMAQRN 370
L++ + E E+ K+A+ N
Sbjct: 363 DELVKGSKREEAEEIV-KIAKTN 384
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 108/261 (41%), Gaps = 1/261 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ AF + ++A +F ++ PD N L+ + +G + M
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G PD +YNI +D Y + G D + EEM+R PT+++ L+ ++
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
K + E+ + DT V N+++ R ++ EM D TY+ +
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
++ +E + EL+ ++ ++NF P T + + + L ++ +++ G
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 408 PHAHALDLLITGLCSRGQVHE 428
P +L++ S QV +
Sbjct: 564 PDGGTAKVLLSACSSEEQVEQ 584
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 35/347 (10%)
Query: 53 ISTSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAW 112
I ++ + L N +A++ F + + P+ ++ + +++ + +W
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTEEAIDVFQ-RMKRDRCKPTTETYNLMINLYGKASKSYMSW 306
Query: 113 MLLQETARTH---PSLITLKAMSIMLSKIAKYQSFEDTLDGFRR--MEEDVFV------- 160
L E R+H P++ T A+ ++ + E+ + + +E DV+V
Sbjct: 307 KLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 161 ----GREFGTDE----------------FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPD 199
G +G E +N+++ A+ +A +VF +M +P
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
KS +LL + ++ DVT E EM + G PD N ++ Y + G+F ++L
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
EME I T LI+ G + +LF E+ +N D + + I A R K
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKK 545
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
L + +EMI+ DG T + +E V+ + + M
Sbjct: 546 LYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 163/391 (41%), Gaps = 19/391 (4%)
Query: 89 PPSHVSFEMTLHILTRMRYFDKAW---MLLQE----TARTHPSLITLKAMSIMLSKIAKY 141
P +H S++ +++ ++R +K W +L+ E + P +I + + +Y
Sbjct: 135 PSTHASWDDLINVSVQLR-LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQY 193
Query: 142 QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDT 200
+ E + ++ E +V E D + +L+KA+C ++ A V +M + SP T
Sbjct: 194 KEAESL---YVQLLESRYVPTE---DTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKT 247
Query: 201 KSM---NILLLGF-KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
+ N + G K G+ + M + P TYN+ I+ Y K + +
Sbjct: 248 IGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWK 307
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L EM + P I T T L++ KA ++F ++ L D VYNAL+ +
Sbjct: 308 LYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYS 367
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTR 376
R+ A + M E D +Y+ M R+ ++++M + P +
Sbjct: 368 RAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 377 TVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+ ++L+ + + + ++ + E G P L+ ++ GQ + + +M
Sbjct: 428 SHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM 487
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+++ +L ++G +++++EL
Sbjct: 488 ENGPCTADISTYNILINIYGKAGFLERIEEL 518
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 167/422 (39%), Gaps = 53/422 (12%)
Query: 90 PSHVSFEMTLHILTRMRYFDKA------WMLLQETARTHPSLITLKAMSIMLSKIAKYQS 143
P V+ + L + + R F KA W + A +H L + + M+ K
Sbjct: 255 PDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSY-TYNTMIDTYGKSGQ 313
Query: 144 FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSM 203
++ + F+RM E+ V T FN ++ + + Q+ E S+ M +PDT++
Sbjct: 314 IKEASETFKRMLEEGIVPT---TVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTY 370
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
NIL+ ++ D+ ++ EM G PD V+Y + + + + L+ EM+
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDD 430
Query: 264 RKFVPTIETITTL-------------------IHGAGIVQNAG---------------KA 289
T + L H AG + + G +A
Sbjct: 431 DNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEA 490
Query: 290 RQLF---NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
++F E+ R ++ YN +I A SK E A L + M+ V D TY+T+
Sbjct: 491 ERVFICCQEVNKRTVI----EYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546
Query: 347 FLGLMRSTGIEGVSELY-QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ ++ S + Y +KM + +V ++ F + +L+++ ++ +VE
Sbjct: 547 -VQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLK 465
P +LI G V +A + M E G ++ + L + + G +D+ +
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 466 EL 467
+
Sbjct: 666 AI 667
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 7/232 (3%)
Query: 204 NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER 263
NI+L ++ V+ + EM+++G P N TY ID Y K G L L +M +
Sbjct: 191 NIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSK 250
Query: 264 RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGV------YNALITALLR 317
P T ++ + KA + F + D+ V YN +I +
Sbjct: 251 IGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGK 310
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
S I+ A M+E+ + VT++TM + + V+ L + M + + P TRT
Sbjct: 311 SGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRT 369
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
+L+ +N ++ + + + + + G P + L+ R V EA
Sbjct: 370 YNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/354 (20%), Positives = 144/354 (40%), Gaps = 16/354 (4%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V+F +HI + L++ T + H + T + +I++S K E
Sbjct: 331 PTTVTFNTMIHIYGNNGQLGEVTSLMK-TMKLHCAPDT-RTYNILISLHTKNNDIERAGA 388
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLL 208
F+ M++D G + + LL AF + ++EA + +M D + + L
Sbjct: 389 YFKEMKDD---GLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTR 445
Query: 209 GFKESGDV-TSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL---EEMERR 264
+ E+ + S F V S + Y+ ID Y ++G + R+ +E+ +R
Sbjct: 446 MYVEAEMLEKSWSWFKRFHVAGNMSSEG--YSANIDAYGERGYLSEAERVFICCQEVNKR 503
Query: 265 KFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESA 324
T+ +I GI ++ KA +LF + S + D YN L+ L +
Sbjct: 504 ----TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKG 559
Query: 325 LSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
+++M E D + Y + ++ + E+Y++M + N P +L+
Sbjct: 560 RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINA 619
Query: 385 FCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
F + ++S + E G ++ + LI G + EA +++L+
Sbjct: 620 FADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+N+L+ + + R+MK AR+ F M + + S ++ G+ + GDV S E + M K
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQK---NGVSWITMISGYTKLGDVQSAEELFRLMSK 291
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM-ERRKFV-PTIETITTLIHGAGIVQNA 286
+ D + Y+ I Y + G+ D L+L +M ER ++ P T+++++ + N
Sbjct: 292 K----DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNT 347
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+ + I + +D + +LI ++ D A + + +K D V+Y M
Sbjct: 348 SFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAM 403
Query: 347 FLGLMRSTGIEGVS----ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
+G GI G++ L+ M ++ P T L+ + + + +N +
Sbjct: 404 IMG----CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+ P A +++ L G++ EA+E K M
Sbjct: 460 DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+ LL + + EAR +F M R + + N +L G+ + + + EM
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPER---NIVTCNAMLTGYVKCRRMNEAWTLFREM-- 134
Query: 229 RGFSPDNV-TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
P NV ++ + + C GR D + L +EM R V +T LI +
Sbjct: 135 ----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNG----DME 186
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
KA+Q+F+ +PSR++V +NA+I + + +E A L +M EK V VT+ +M
Sbjct: 187 KAKQVFDAMPSRDVVS----WNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMV 238
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
G R + L+ +M +RN V T +
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 20/224 (8%)
Query: 162 REFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPD-TKSMNILLLGFKESGDVTSVE 220
R F +E +L + S+ + AR + K+ R S + LL + ++G +
Sbjct: 40 RGFSNEEALILRRL--SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEAR 97
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
+ + M +R VT N + Y K R + L EM + T+ +T L
Sbjct: 98 VLFEVMPERNI----VTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTV-MLTALCDDG 152
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ A +LF+E+P RN+V +N L+T L+R+ D+E A + D M + V
Sbjct: 153 ----RSEDAVELFDEMPERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMPSRDV---- 200
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
V+++ M G + + G+E L+ M+++N V T V +Y
Sbjct: 201 VSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRY 244
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 26/266 (9%)
Query: 178 SQRQMKEARSVFGKMVSRFSPDTKSMN----ILLLGFKESGDVTSVELFYHEMVKRGFSP 233
S R R +G + + + + ++L E G V + L ++ +RG
Sbjct: 17 SLRSSISCRRYYGDKIPNYGSYRRGFSNEEALILRRLSEGGLVHARHLL-DKIPQRGSIN 75
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
V + + Y K G + L E M R V T ++ G + +A LF
Sbjct: 76 RVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV----TCNAMLTGYVKCRRMNEAWTLF 131
Query: 294 NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
E+P +N+V + ++TAL E A+ L DEM E+ V V+++T+ GL+R+
Sbjct: 132 REMP-KNVVS----WTVMLTALCDDGRSEDAVELFDEMPERNV----VSWNTLVTGLIRN 182
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
+E +++ M R+ V ++K + +N ++ + L+ + EK
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWN----AMIKGYIENDGMEEAKLLFGDMSEKNVVTWTS-- 236
Query: 414 DLLITGLCSRGQVHEAFECSKQMLER 439
++ G C G V EA+ +M ER
Sbjct: 237 --MVYGYCRYGDVREAYRLFCEMPER 260
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 107 YFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
Y D+A +L + +++T AM L+ K + + FR M ++V
Sbjct: 92 YLDEARVLFE--VMPERNIVTCNAM---LTGYVKCRRMNEAWTLFREMPKNVV------- 139
Query: 167 DEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+ V+L A C + ++A +F +M R + S N L+ G +GD+ + + M
Sbjct: 140 -SWTVMLTALCDDGRSEDAVELFDEMPER---NVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
R D V++N I Y + + L +M + V T T++++G +
Sbjct: 196 PSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDV 247
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
+A +LF E+P RN+V + A+I+ ++ AL L EM + ++D V+
Sbjct: 248 REAYRLFCEMPERNIV----SWTAMISGFAWNELYREALMLFLEM---KKDVDAVS 296
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 118/283 (41%), Gaps = 5/283 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N +++ C + + +E+ + G+M + P ++N + E D +M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
GF P + C+ GR D + L+++ F+ + T I G +++N G
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDG--LIKNEG 594
Query: 288 KAR--QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
R +LF +I + D Y+ LI AL ++ A L +EM+ K ++ TY++
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
M G + I+ +M + P T L+ C + R ++ WN + K
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKD 714
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF 448
P+ LI GLC G EA ++M E+ +A +
Sbjct: 715 CYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 24/308 (7%)
Query: 153 RMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKE 212
R++E G F +L+ +C+ + + A SVF +++SR D IL++ F +
Sbjct: 201 RLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCK 260
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIET 272
G V + +R + TY + I + K+ R +L E+M R I
Sbjct: 261 WGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL 320
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
LI G ++ A L+ EI + D G+ L+ + ES LS + E+I
Sbjct: 321 YDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSE----ESELSRITEVI 376
Query: 333 EKRVELDGVT--YHTMFLGLMRSTGI----------------EGVSELYQKMAQRN--FV 372
++ V Y ++F G +R+ + +GVSE+ + + N +
Sbjct: 377 IGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAIL 436
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFEC 432
P + ++ +++ + ++D++++L + +V+ G P + +I G+C G+ E+ +
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 433 SKQMLERG 440
+M + G
Sbjct: 497 LGEMKDAG 504
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
PD + ++L+ ++ ++ ++EMV +G P TYN ID +CK+G GL
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
+ M + P + T T+LIHG +A +NE+ ++ + + ALI L
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLC 730
Query: 317 RSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
+ AL EM EK +E D Y ++ + S I ++++M + P
Sbjct: 731 KCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 177/456 (38%), Gaps = 66/456 (14%)
Query: 64 RLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRY--FDKAWMLLQETART 121
+++ + +AL FN L H+S T+ +++ ++ DKA+ L+ E
Sbjct: 222 QVYCNTGKSERALSVFNEILSRGWLD-EHIS---TILVVSFCKWGQVDKAFELI-EMLEE 276
Query: 122 HPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQ 181
+ K +++ K + F +M +G ++VL+ C +
Sbjct: 277 RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRR---MGMNADIALYDVLIGGLCKHKD 333
Query: 182 MKEARSVFGKMV-SRFSPDTKSMNILLLGFKES-----------GDV--TSVELFYHEMV 227
++ A S++ ++ S PD + LL F E GD+ SV L Y +
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLF 393
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRF-GDGL----RLLEEMERRKFVPTIETITTLIHGAGI 282
+ GF +++ + G + DG+ +LL++ + +P ++++ +I+
Sbjct: 394 E-GFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAILPDSDSLSIVINCLVK 451
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
A L ++I L+ +YN +I + + E +L L+ EM + VE T
Sbjct: 452 ANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFR------------ 390
+ ++ L G +L +KM F P + L+K C+N R
Sbjct: 512 LNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVA 571
Query: 391 -----------------------LDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
+D L L+ + G+CP A +LI LC +
Sbjct: 572 GEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
EA +M+ +G + A++ + + G+ID+
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 181/462 (39%), Gaps = 74/462 (16%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHS-------QSPPSHVSFEMTLHILTRMR 106
+ S E + G+L SN K L N L S + P+ + +R
Sbjct: 29 TVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQ--------SGLR 80
Query: 107 YFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGT 166
+F A L ++ H + + KA I+ + AK + ++ +R+ E+ FV
Sbjct: 81 FFIWAGTL---SSHRHSAYMYTKACDILKIR-AKPDLIKYVIESYRK--EECFVN----V 130
Query: 167 DEFNVLLKAFCSQRQMK-EARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYH 224
++L C+Q + EA V K DT + N+++ F + GD+ ++
Sbjct: 131 KTMRIVL-TLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIK 189
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
EM G PD +TY I+ YC G+ D RL +EM + V T + ++ G
Sbjct: 190 EMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSG 249
Query: 285 NAGKARQLFNEIPSRN---LVVDTGV-YNALITALLRSKDIESALSLMDEM--------- 331
+ +A +L E+ + L+ V Y +I A + +E AL ++D M
Sbjct: 250 DMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNR 309
Query: 332 -----------------------IEKRVELDGVTYHTMF----LGLMRSTGIEGVSELYQ 364
I+K V+L GV+ F + L+R E ++++
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFR 369
Query: 365 KMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL----VEKGYCPHAHALDLLITGL 420
M R P + + C R L+ + V+ HA+ L+ GL
Sbjct: 370 LMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAV--LLLGL 427
Query: 421 CSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
C +G EA + +K ML++ + + + L ++GD D
Sbjct: 428 CQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDED 469
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER---RKFVPTIETITTLIHGAGI 282
++ + F+PD+ Y + Y K GR D R+LE M R R P T TT++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSA--- 461
Query: 283 VQNAG---KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR-VEL 338
NAG +ARQ+ E+ + + YN L+ + I+ A L+ EM E +E
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 339 DGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW 398
D V+Y+ + G + G + +M R P + LMK F + + L+ ++
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 399 NYLVEKGYCPHAH----ALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERF 454
+ ++ P A ++L+ G C G + +A +M E G + + A++ L
Sbjct: 582 DEMMND---PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANG 638
Query: 455 LLQS 458
+ Q+
Sbjct: 639 VSQA 642
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
PD + ++ F +G + EM + G + +TYN+ + YCK+ + L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 258 LEEM-ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L EM E P + + +I G ++ ++ A FNE+ +R + Y L+ A
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 317 RSKDIESALSLMDEMI-EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT 375
S + A + DEM+ + RV++D + ++ + G R IE + +M + F P
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 376 RTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
T L Q + +L LW + E+
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 89/237 (37%), Gaps = 57/237 (24%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+NVLLK +C Q Q+ A + +M + PD S NI++ G D F++EM
Sbjct: 490 YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEM 549
Query: 227 VKRGFSPDNVTY------------------------------------NIRIDTYCKKGR 250
RG +P ++Y N+ ++ YC+ G
Sbjct: 550 RTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGL 609
Query: 251 FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV-------- 302
D R++ M+ F P + T +L +G + G A L+ EI R V
Sbjct: 610 IEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSD 669
Query: 303 -----------VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
D G+ + L +R+ + AL ++ M E + + Y +++
Sbjct: 670 SSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYV 726
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSV 219
GR +F +L++ R+ V+ KM F P N ++ ++G
Sbjct: 188 GRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLA 247
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
Y + + G ++ T+ I + CK GR + L +L+ M P
Sbjct: 248 LAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKP----------- 296
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
D Y A+I L+ +++++L + DEM ++ D
Sbjct: 297 ------------------------DVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
+ Y T+ +GL + +E EL+ +M + + +L++ F + ++ + +LW
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
LV+ GY + +I GLCS QV +A++
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
++ + IL+ G ++G + + M + PD Y I T +G LR+
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW 321
Query: 259 EEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRS 318
+EM R + P + TL+ G + +LF E+ + +++D +Y LI +
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVAD 381
Query: 319 KDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTV 378
+ SA +L +++++ D Y+ + GL ++ +L+Q + P T+
Sbjct: 382 GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETL 441
Query: 379 VMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+M + RL ++ + E GY P + L LC+ + + +L+
Sbjct: 442 SPIMVAYVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKNAMALDVFYILK 500
Query: 439 RGRHMSAASFLMLERFLLQSGDIDK 463
H S + + +L L + GDI K
Sbjct: 501 TKGHGSVSVYNILMEALYKMGDIQK 525
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/337 (17%), Positives = 117/337 (34%), Gaps = 40/337 (11%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ L+ C +++ +F +M + D + +L+ GF G V S + ++V
Sbjct: 336 YGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLV 395
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G+ D YN I C + +L + + P ET++ ++ ++
Sbjct: 396 DSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLS 455
Query: 288 KARQLFNEIPSRNLVVD----------------------------------TGVYNALIT 313
+ I V VYN L+
Sbjct: 456 DFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILME 515
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
AL + DI+ +LSL EM + E D +Y + ++ ++K+ + + VP
Sbjct: 516 ALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVP 575
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYL---VEKGYCPHAHALDLLITGLCSRGQVHEAF 430
+ L K CQ +D + L VE G P L + +C +
Sbjct: 576 SIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHVCKGSNAEKVM 633
Query: 431 ECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
+ +M + G ++ + + + + G I +E+
Sbjct: 634 KVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREV 670
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 143/342 (41%), Gaps = 5/342 (1%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS 124
L + ++ ++L ++ ++ PS ++ + L + R + FD A L E R
Sbjct: 128 LLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM-RQRAL 186
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
S +++ K F+ L ++ME+D G L + C +
Sbjct: 187 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD---YSK 243
Query: 185 ARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A S+F ++ S +PD + N ++ + ++ L EM + G P+ V+Y+ +
Sbjct: 244 AISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLS 303
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
Y + +F + L + EM+ + T +I G + +A +LF + ++
Sbjct: 304 VYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 304 DTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
+ YN ++ ++ A+ L M K +E + VTY+TM ++ E + L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 364 QKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
Q+M R P T ++ + + +LD + +L+ L G
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFY 223
T ++ LL + + EA SVF +M + D + NI++ + + V + +
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+ K P+ V+YN + Y + FG+ + L M+R+ + T T+I G
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
KA L E+ SR + + Y+ +I+ ++ ++ A +L ++ VE+D V Y
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMK 383
TM + R + L ++ + +P+ + +L K
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 18/301 (5%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSI 133
KA + S P +F + + ++ FD ++ E + T+ +I
Sbjct: 197 KAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTI 256
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
+ K FE+ M ED + T N ++ ++ + R M++ S +
Sbjct: 257 -IDGYGKAGMFEEMESVLADMIEDGDSLPDVCT--LNSIIGSYGNGRNMRKMESWY---- 309
Query: 194 SRFS-----PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
SRF PD + NIL+L F ++G + M KR FS VTYNI I+T+ K
Sbjct: 310 SRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKA 369
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQNAGKARQLFNEIPSRNLVVDT 305
GR + +M+ + P T +L++ AG+V K + +I + ++V+DT
Sbjct: 370 GRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVV---KIDSVLRQIVNSDVVLDT 426
Query: 306 GVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
+N +I A ++ D+ + L +M E++ + D +T+ TM + V EL ++
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQ 486
Query: 366 M 366
M
Sbjct: 487 M 487
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 2/229 (0%)
Query: 159 FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDV 216
++G T +N ++ + +E SV M+ PD ++N ++ + ++
Sbjct: 243 YLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNM 302
Query: 217 TSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTL 276
+E +Y G PD T+NI I ++ K G + +++ ME+R F T T +
Sbjct: 303 RKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIV 362
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRV 336
I G K +F ++ + + ++ Y +L+ A ++ + S++ +++ V
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDV 422
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
LD ++ + ++ + + ELY +M +R P T ++K +
Sbjct: 423 VLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 172 LLKAFCSQRQ-MKEARSVFGKMVSRFSPDTKSMNILLLG-FKESGDVTSVELFYHEMVKR 229
L + C+++ + +A+ + +M KSM L+G + +V F+ +V +
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
PD TY I I+TYC+ L E+M+RR P + T + L+ N+
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NSDPE 682
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT------- 342
+ E+ + +++ D Y +I D++ +L +M + + D VT
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 343 --------------------YHTMFLGLMRSTGIEGVSE-LYQKMAQRNFVPQTRTVVML 381
Y+T+ + G G ++ ++ +M + P L
Sbjct: 743 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 802
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+ C+ L + +++ ++E G P LI G C G V +A + K+MLE+G
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 442 HMSAASF 448
+ AS
Sbjct: 863 KPTKASL 869
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%)
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
+ Y + C + R D ++ +ME+ P + + +I G N KA +FN+
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ + ++ + ++++ + + A L E E + LD V Y+ F L +
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
+E EL+++M + P L+ C + + L + G P ++
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 416 LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
L GL + G EAFE K M RG + + M+ L+ +G++DK
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDK 519
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 29/305 (9%)
Query: 59 ENVLGRLFASH---SNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLL 115
+++ G+L + +N KA EFF L + P ++ + ++ R+ +A+ L
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEI-LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALF 658
Query: 116 QETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEE-DVFVGREFGTDEFNVL 172
++ R P ++T S++L+ + LD R ME DV + + ++
Sbjct: 659 EDMKRRDVKPDVVTY---SVLLNS-------DPELDMKREMEAFDVIPDVVY----YTIM 704
Query: 173 LKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
+ +C +K+ ++F M R PD + +LL E EM
Sbjct: 705 INRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDV 757
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
PD Y + ID CK G G+ R+ ++M P T LI + +A+
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
+F+ + + D Y ALI R+ + A+ L+ EM+EK ++ + + +
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKL 877
Query: 352 RSTGI 356
++ G+
Sbjct: 878 KAKGL 882
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 116/293 (39%), Gaps = 21/293 (7%)
Query: 109 DKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDE 168
D A+ LLQ R L+ + I K+ + +E ++ E V + G D
Sbjct: 269 DIAYFLLQPL-RDANILVDKSDLGIAYRKVVRGLCYEMRIED---AESVVLDMEKHGIDP 324
Query: 169 ----FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLG-----FKESGDVTSV 219
++ +++ + +A VF KM+ + K +N +++ + + G+ +
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKK----RKRINCVIVSSILQCYCQMGNFSEA 380
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
+ E + S D V YN+ D K G+ + + L EM + P + TTLI G
Sbjct: 381 YDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+ A L E+ D +YN L L + + A + M + V+
Sbjct: 441 CCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPT 500
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
VT++ + GL+ + ++ Y+ + ++ ++K FC LD
Sbjct: 501 YVTHNMVIEGLIDAGELDKAEAFYESLEHKS----RENDASMVKGFCAAGCLD 549
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 132/332 (39%), Gaps = 44/332 (13%)
Query: 95 FEMTLHILTRMRYFDKAWMLLQ--ETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFR 152
+ + L+ + +D AW + + + +P +T + L K + S ++ + F
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGR--SAKEVWEIFE 333
Query: 153 RMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFK 211
+M E G ++ D F L+K+FC + +EA + +M + +T N L+ +
Sbjct: 334 KMSEK---GVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 212 ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME--------- 262
+S + VE + EM +G P TYNI +D Y ++ + LL EME
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 263 ------------------------RRKFV---PTIETITTLIHGAGIVQNAGKARQLFNE 295
R K V P+ + T LIH + KA F E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ + Y +++ A RS D + + M+ ++++ +TY+T+ G +
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
++ + ++ P T MLM + +
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 146/362 (40%), Gaps = 44/362 (12%)
Query: 112 WMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV 171
WM LQE PSL + +A S++ + +GRE D +
Sbjct: 227 WMSLQE-----PSLASPRACSVLFT----------------------LLGRERMADYILL 259
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
LL + + ++ R ++ +S S + + ++ +V Y M K
Sbjct: 260 LLSNLPDKEEFRDVR-LYNAAISGLSASQR--------YDDAWEV------YEAMDKINV 304
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGL-RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKAR 290
PDNVT I I T K GR + + E+M + + + L+ +A
Sbjct: 305 YPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEAL 364
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+ E+ + + +T VYN L+ A +S IE L EM +K ++ TY+ +
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 351 MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRL-DLSLSLWNYLVEKGYCPH 409
R + V L ++M P ++ L+ + + ++ D++ + + + G P
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
+H+ LI G +A+ ++M + G S ++ + +SGD KL E+ +
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 470 MI 471
++
Sbjct: 545 LM 546
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 11/276 (3%)
Query: 54 STSLVENVLGRLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWM 113
S ++V N L + + SN ++ +E + PS ++ + + R D
Sbjct: 377 SNTIVYNTLMDAY-NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 114 LLQETART--HPSLITLKAMSIMLSKIAKYQSFED-TLDGFRRMEEDVFVGREFGTDEFN 170
LL+E P++ K+ + ++S + + D D F RM++ VG + + +
Sbjct: 436 LLREMEDLGLEPNV---KSYTCLISAYGRTKKMSDMAADAFLRMKK---VGLKPSSHSYT 489
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
L+ A+ ++A + F +M P ++ +L F+ SGD + + M++
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
+TYN +D + K+G + + ++ E + P++ T L++ K
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
QL E+ + NL D+ Y+ +I A +R +D + A
Sbjct: 610 PQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF------- 251
+T + L+ G ++GD + + EMV G PD +TYNI +D CK G+
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 252 --GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
DG L + + P + T TT+I G +A LF ++ + D+G YN
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
LI A LR D ++ L+ EM R D TY
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 10/182 (5%)
Query: 291 QLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGL 350
+LF E+ R LV +T Y LI L ++ D + A + EM+ V D +TY+ + GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 351 MR---------STGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+ + +E +L+ ++ + P T ++ FC+ + + +L+ +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
E G P + + LI G + E K+M R AS L +L G +
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDMLHDGRL 180
Query: 462 DK 463
DK
Sbjct: 181 DK 182
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 255 LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITA 314
+ L EM +R V T TTLI G + A+++F E+ S + D YN L+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 315 LLRSKDIESAL---------SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
L ++ +E AL L + K V+ + VTY TM G + E L++K
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 366 MAQRNFVPQTRTVVMLMK 383
M + +P + T L++
Sbjct: 121 MKEDGPLPDSGTYNTLIR 138
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 149/356 (41%), Gaps = 10/356 (2%)
Query: 78 FFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSK 137
FFN+ S P + + +T+ L R F + E + L + S +++
Sbjct: 172 FFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNI-TYSTIITC 230
Query: 138 IAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-F 196
+ + ++ F RM + + E ++ +L + +++E S++ + V+ +
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVT---YSAILDVYSKSGKVEEVLSLYERAVATGW 287
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
PD + ++L F E+GD + EM P+ V YN ++ + G+ G
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347
Query: 257 LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALL 316
L EM P +T+T L+ G + A A QL+ E+ ++ +D +YN L+
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407
Query: 317 RSKDIESALSLMDEMIEK-RVELDGVTYHTMFLGLMRSTG-IEGVSELYQKMAQRNFVPQ 374
E A L ++M E + D +Y M L + S G E EL+++M +
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAM-LNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT--GLCSRGQVHE 428
L++ + R+D + +++ +++G P L++ LC + E
Sbjct: 467 VMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAE 522
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 115/284 (40%), Gaps = 44/284 (15%)
Query: 138 IAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM-VSRF 196
+ K + + D + G R + +V +N+LL+AF ++ + ++F + +S
Sbjct: 188 LEKVRGYLDKMKGIERCQPNVVT--------YNILLRAFAQSGKVDQVNALFKDLDMSPV 239
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLR 256
SPD + N ++ + ++G + +E M PD +T+N+ ID+Y KK F +
Sbjct: 240 SPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
Query: 257 LLEEMERRKFVPTIETITTLI--HGA---------------------------------G 281
+ + R K PT+ T ++I +G G
Sbjct: 300 TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYG 359
Query: 282 IVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ +AR++F E+ + V+ NA++ R+ A L RV D
Sbjct: 360 YCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
TY ++ ++ E V L +KM + VP R + ++ F
Sbjct: 420 TYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 169 FNVLLKAFCSQRQMKEA----RSVFGKM--VSRFSPDTKSMNILLLGFKESGDVTSVELF 222
+N L+ A R +A R KM + R P+ + NILL F +SG V V
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL 230
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
+ ++ SPD T+N +D Y K G + +L M + P I T LI G
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
Q K Q F + +N++I +++ I+ A + +M + +T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
Y M + + E+++++ + + V + T+ +++ +C+N
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 140/358 (39%), Gaps = 53/358 (14%)
Query: 73 LKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQE--------TARTHPS 124
L+ LE F + P + + + ++ + A L E A + +
Sbjct: 114 LQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNA 173
Query: 125 LITLKAMSIMLSK-IAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMK 183
LIT + +K + K + + D + G R + +V +N+LL+AF ++
Sbjct: 174 LITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVT--------YNILLRAFAQSGKVD 225
Query: 184 EARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRI 242
+ ++F + +S SPD + N ++ + ++G + +E M PD +T+N+ I
Sbjct: 226 QVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLI 285
Query: 243 DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI--HGA-------------------- 280
D+Y KK F + + + R K PT+ T ++I +G
Sbjct: 286 DSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYI 345
Query: 281 -------------GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
G + +AR++F E+ + V+ NA++ R+ A L
Sbjct: 346 PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKL 405
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
RV D TY ++ ++ E V L +KM + VP R + ++ F
Sbjct: 406 FHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 6/226 (2%)
Query: 169 FNVLLKAFCSQRQMKEA----RSVFGKM--VSRFSPDTKSMNILLLGFKESGDVTSVELF 222
+N L+ A R +A R KM + R P+ + NILL F +SG V V
Sbjct: 171 YNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL 230
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
+ ++ SPD T+N +D Y K G + +L M + P I T LI G
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
Q K Q F + +N++I +++ I+ A + +M + +T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
Y M + + E+++++ + + V + T+ +++ +C+N
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRN 396
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEI 296
T N+RI + G+ + +L + + + +I + +++ G AR+LF+E+
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSK----SISSWNSMVAGYFANLMPRDARKLFDEM 74
Query: 297 PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGI 356
P RN++ +N L++ +++ +I+ A + D M E+ V V++ + G + + +
Sbjct: 75 PDRNII----SWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKV 126
Query: 357 EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLL 416
+ L+ KM ++N V T VML+ F Q+ R+D + L+ + +K A +
Sbjct: 127 DVAESLFWKMPEKNKVSWT---VMLIG-FLQDGRIDDACKLYEMIPDKDNI----ARTSM 178
Query: 417 ITGLCSRGQVHEAFECSKQMLER 439
I GLC G+V EA E +M ER
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSER 201
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 141/332 (42%), Gaps = 32/332 (9%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+ L+K + ++ A S+F KM + + S ++L+GF + G + Y EM+
Sbjct: 113 WTALVKGYVHNGKVDVAESLFWKMPEK---NKVSWTVMLIGFLQDGRIDDACKLY-EMIP 168
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
DN+ I CK+GR + + +EM R + T TT++ G G
Sbjct: 169 ---DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVI----TWTTMVTGYGQNNRVDD 221
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
AR++F+ +P + V + +++ +++ IE A L + M K V + + M
Sbjct: 222 ARKIFDVMPEKTEV----SWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMIS 273
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL + I ++ M +RN +TV+ + + F L+ +L L+ + ++G P
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDA-SWQTVIKIHER--NGFELE-ALDLFILMQKQGVRP 329
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI------- 461
L +++ S +H + Q++ + +L ++ G++
Sbjct: 330 TFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 462 DKLKELDQMIKNLLSVLPPSKGHATGSSNLKV 493
D+ D ++ N S++ H G LKV
Sbjct: 390 DRFPSKDIIMWN--SIISGYASHGLGEEALKV 419
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 114/286 (39%), Gaps = 50/286 (17%)
Query: 181 QMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
++ EAR +F S+ S N ++ G+ + + EM R +++N
Sbjct: 32 KIHEARKLFDSCDSK---SISSWNSMVAGYFANLMPRDARKLFDEMPDRNI----ISWNG 84
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
+ Y K G + ++ + M R V + +H + A LF ++P +N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV----DVAESLFWKMPEKN 140
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVS 360
V + ++ L+ I+ A L EMI + D + +M GL + ++
Sbjct: 141 KV----SWTVMLIGFLQDGRIDDACKLY-EMIPDK---DNIARTSMIHGLCKEGRVDEAR 192
Query: 361 ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK----------GYCPHA 410
E++ +M++R+ + T V + QN R+D + +++ + EK GY +
Sbjct: 193 EIFDEMSERSVITWTTMVTG----YGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNG 248
Query: 411 H-----------------ALDLLITGLCSRGQVHEAFECSKQMLER 439
A + +I+GL +G++ +A M ER
Sbjct: 249 RIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+ L+ G +Q KA +LF ++ +T YN L+ A + D+ A L +M+
Sbjct: 161 LDVLVSHRGYLQ---KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
E+ V D +Y + G R + G EL M + FVP RT L+ C D
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD-RT---LIGGLCDQGMFD 273
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLE 452
++ KG+ PH + L+ G CS G+V EA + + +++ G + + ++ M+
Sbjct: 274 EGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Query: 453 RFLLQSGDIDKLK 465
+ + +K+K
Sbjct: 334 PLICNEDESEKIK 346
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 25/289 (8%)
Query: 64 RLFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHP 123
+L AS S+ L A E F++ S S + + L R RYF+ L+ + H
Sbjct: 56 KLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFN----LIDDVLAKHR 111
Query: 124 SL---ITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQR 180
S +T + + ++ A+ + E L F +M E F + N +L S R
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQ---PKHLNRILDVLVSHR 168
Query: 181 -QMKEARSVFGKMVSRFS---PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNV 236
+++A +F SR P+T+S N+L+ F + D++ + +M++R PD
Sbjct: 169 GYLQKAFELFKS--SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 237 TYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEI 296
+Y I I +C+KG+ + LL++M + FVP TLI G + ++ E+
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEM 282
Query: 297 PSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
S+ V N L+ +E A +++ +++ +G T H+
Sbjct: 283 ISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK-----NGETLHS 326
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 171 VLLKAFCSQRQMKEARSVF-GKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
++ F QR EA V+ M + I + + E+ + EMVK+
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
GF V Y+ +D Y K R D +RL+ +M++R P I +LI G + +A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+++ E+ ++ D Y ++I+A RSK++E + L E R ++D M
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGV 537
Query: 350 LMRSTGIEGVSELYQKM 366
+++ I+ + L Q M
Sbjct: 538 FSKTSRIDELMRLLQDM 554
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRF-SPDTKSMNILLLGFKESGDVTSV 219
R G F+ ++ + C R +K+A+++ M+S+ +P N+++ ++GD+
Sbjct: 367 ARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEA 426
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMER--RKFVPTIETITTLI 277
+ M RG PD TY + I Y K G + +L E ++ +K P T LI
Sbjct: 427 KEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV--TYHALI 484
Query: 278 HGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL-LRSKDIESALSLMDEMIEKRV 336
G ++ +A +L NE+ + + YN LI + L++ D E A L +EM +K +
Sbjct: 485 RGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Query: 337 ELDGVTYHTMFLGLMRS 353
L+ ++ GL+R+
Sbjct: 545 HLNAISQ-----GLIRA 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 140/341 (41%), Gaps = 9/341 (2%)
Query: 112 WMLLQETARTHP-SLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFN 170
W L++E ++ L+ ++ +++ K + D F + EE F +
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPN---AKTYY 270
Query: 171 VLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+ L+A C + M A SV KM+ S + NI+ KE + ++ K
Sbjct: 271 LTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTK 330
Query: 229 RGFSPDNVTYNIRIDTYCKK-GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
P + I CK G +L ++ I+ + +IH ++N
Sbjct: 331 EKSLPPRFVATL-ITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVK 389
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
A+ L ++ S+ V+N ++ A ++ D++ A ++ M + ++ D TY +
Sbjct: 390 DAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVII 449
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
G + ++ E+ + +++ T L++ +C+ D +L L N + G
Sbjct: 450 SGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQ 509
Query: 408 PHAHALDLLITGLCSRGQVHEAFECS-KQMLERGRHMSAAS 447
P+A + LI C + E E ++M ++G H++A S
Sbjct: 510 PNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAIS 550
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 133/349 (38%), Gaps = 73/349 (20%)
Query: 74 KALEFFNFTLHHSQSP-PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMS 132
KAL+ + HS SP S + E+T+ L + R F L+ E+ + P + S
Sbjct: 48 KALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLI-ESHKNDPKIKEEPFYS 106
Query: 133 IMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKM 192
++ + F + F +M++ G FN LL A + + +F ++
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQ---YGTPRSAVSFNALLNACLHSKNFDKVPQLFDEI 163
Query: 193 VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFG 252
R Y++++ PD ++Y I I +YC G
Sbjct: 164 PQR---------------------------YNKII-----PDKISYGILIKSYCDSGTPE 191
Query: 253 DGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALI 312
+ ++ +M+ G G + V T + ++
Sbjct: 192 KAIEIMRQMQ----------------GKG-------------------MEVTTIAFTTIL 216
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFV 372
++L + ++E A +L +EM++K ELD Y+ + + + E V EL ++M+
Sbjct: 217 SSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLK 275
Query: 373 PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLC 421
P T + LM +C+ LD + ++ L P+A LI LC
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVF------------GKMVSRFSPDTKSMNILLL 208
GRE +N L+ + + Q++ AR +F G+ RF + S N ++
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
+ + GDV S L + +M R D +++N ID Y R D L EM R
Sbjct: 290 AYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRD--- 342
Query: 269 TIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLM 328
+ ++ G V N AR F + P ++ V +N++I A ++KD + A+ L
Sbjct: 343 -AHSWNMMVSGYASVGNVELARHYFEKTPEKHTV----SWNSIIAAYEKNKDYKEAVDL- 396
Query: 329 DEMIEKRVELDGVTYHTMFLGLMRSTGI 356
I +E + HT+ L STG+
Sbjct: 397 --FIRMNIEGEKPDPHTLTSLLSASTGL 422
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 150 GFRRMEEDVFVGREF-GTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLL 208
G+ D+F E T +N ++ + +R+M +AR +F M R D + N ++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR---DVVTWNTMIS 110
Query: 209 GFKESGDVTSVE---LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
G+ G + +E + EM R D+ ++N I Y K R G+ L L E+M R
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 266 FVPTIETITTLIHGAGIVQNA--GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIES 323
V IT G QN A LF ++P V D+ AL+ L++++ +
Sbjct: 167 AVSWSAMIT------GFCQNGEVDSAVVLFRKMP----VKDSSPLCALVAGLIKNERLSE 216
Query: 324 ALSLMDE---MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
A ++ + ++ R +L Y+T+ +G + +E L+ ++
Sbjct: 217 AAWVLGQYGSLVSGREDLV-YAYNTLIVGYGQRGQVEAARCLFDQI 261
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
N ++ + G + + E++E R V T T+I G + +AR+LF+ +P
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTV----TWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 299 RNLVVDTGVYNALITALLRSKDI---ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
R++V +N +I+ + I E A L DEM + D +++TM G ++
Sbjct: 100 RDVVT----WNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
I L++KM +RN V + ++ FCQN +D ++ L+ + K P L
Sbjct: 152 IGEALLLFEKMPERNAVSWS----AMITGFCQNGEVDSAVVLFRKMPVKDSSP----LCA 203
Query: 416 LITGLCSRGQVHEA 429
L+ GL ++ EA
Sbjct: 204 LVAGLIKNERLSEA 217
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 166 TDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHE 225
T +N ++ + +M++A ++F +M +R D S N+++ G+ G+V EL H
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEMPNR---DAHSWNMMVSGYASVGNV---ELARHY 365
Query: 226 MVKRGFSPD--NVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
K +P+ V++N I Y K + + + L M P T+T+L+ + +
Sbjct: 366 FEK---TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGL 422
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
N Q+ ++I + ++ D V+NALIT R +I + + DEM KR + +T+
Sbjct: 423 VNLRLGMQM-HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR---EVITW 478
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLM 382
+ M G L+ M P T V ++
Sbjct: 479 NAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVL 517
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 196 FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGL 255
FS + + N LL + + GD+ S + + EM R V+Y I Y ++G G+ +
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAV 382
Query: 256 RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
+L EEME P + T+T +++ + + +++ I +L D V NAL+
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 316 LRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRST-GIEGVSELYQKMAQRNFVPQ 374
+ ++ A + EM RV+ D ++++T+ G ++ E +S + ++ F P
Sbjct: 443 AKCGSMQEAELVFSEM---RVK-DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 375 TRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLI 417
RTV ++ D + Y++ GY H + L+
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 122/299 (40%), Gaps = 12/299 (4%)
Query: 146 DTLDGFRRMEEDV------FVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPD 199
++LD + E DV F G+ F D L + + A V ++ P
Sbjct: 117 ESLDACKPNEADVCDVITGFGGKLFEQDAVVTLN----NMTNPETAPLVLNNLLETMKPS 172
Query: 200 TKSM--NILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
+ + N+ + F++S D+ E + EM++RG PDN T+ I + G +
Sbjct: 173 REVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
E+M P T+ +I G N A L++ + +D ++ LI
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
S + + L++ +EM V+ + V Y+ + + R+ +Y+ + F P T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
L++ + + D +L+++ + EKG + L++ V EAFE + M
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 100/246 (40%)
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNE 295
+ YN+ + + K +L +EM R P T TT+I A +A + F +
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 296 IPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTG 355
+ S D A+I A R+ +++ ALSL D ++ +D VT+ T+ S
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGN 295
Query: 356 IEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDL 415
+G +Y++M P L+ + R + ++ L+ G+ P+
Sbjct: 296 YDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAA 355
Query: 416 LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLL 475
L+ +A ++M E+G ++ + L + +D+ E+ Q +KN
Sbjct: 356 LVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCE 415
Query: 476 SVLPPS 481
+ P S
Sbjct: 416 TCDPDS 421
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 1/218 (0%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ +L S + +EA + +M V SP+ + LL + GD + EM
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
G P+ V + Y K G F LL E+E + L+ G
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+AR +F+++ + + D + +I+AL RSK + A L + + D V +TM
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTML 419
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
R+ +E V + +KM ++ P T +L+KYF
Sbjct: 420 CAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYF 457
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 22/342 (6%)
Query: 136 SKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-- 193
S I++ Q D L +R+ + V + NV+L+ F + ++ +F M
Sbjct: 74 SAISEVQRSSDFLSSLQRLATVLKV------QDLNVILRDFGISGRWQDLIQLFEWMQQH 127
Query: 194 SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD 253
+ S T S I +G K +V+ Y + + N + K G+
Sbjct: 128 GKISVSTYSSCIKFVGAK---NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDS 184
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNA-GKARQLFNEIPSRNLVVDTGVYNALI 312
++L ++M+R P + T TL+ G V+N KA +L E+P + +D+ +Y ++
Sbjct: 185 CIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVL 244
Query: 313 TALLRSKDIESALSLMDEMIEKRVELDGVT-YHTMFLGLMRSTGIEG----VSELYQKMA 367
+ E A + + +M +VE YH + L+ S +G EL +M
Sbjct: 245 AICASNGRSEEAENFIQQM---KVEGHSPNIYH--YSSLLNSYSWKGDYKKADELMTEMK 299
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
VP + L+K + + D S L + L GY + +L+ GL G++
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 428 EAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
EA M +G + ++ L +S + KEL +
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSR 401
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 13/284 (4%)
Query: 85 HSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETART--HPSLITLKAMSIMLSKIAKYQ 142
H+ P H ++ + + ++ FDK LL + R P+ IT + K +
Sbjct: 215 HNCQPDVH-TYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFV 273
Query: 143 SFEDTLDGFRRMEEDVFVGREFGTDEF--NVLLKAFCSQRQMKEARSVFGKMVSR-FSPD 199
E TL + + ED + D + N L+AF Q++ + + K S P+
Sbjct: 274 EMESTL--IQMLGED-----DCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPN 326
Query: 200 TKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
++ NILL + +SG+ + M K +S VTYN+ ID + + G L
Sbjct: 327 IRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFR 386
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
M+ + P+ T+ +L+ G A K + I + ++ +D +N L+ A R +
Sbjct: 387 LMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRME 446
Query: 320 DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELY 363
+++ M +K + D +TY TM S V EL+
Sbjct: 447 KFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELH 490
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 122/300 (40%), Gaps = 11/300 (3%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLS---KIAKYQSFEDT 147
+H + + +R FD A+ LL+ +H + SI++ ++ + +D
Sbjct: 184 NHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDL 243
Query: 148 LDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNI 205
L RR G T +N L+ A+ + E S +M+ PD+ +MN
Sbjct: 244 LSDMRRQ------GIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNS 297
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
L F +G + +E Y + G P+ T+NI +D+Y K G + ++E M++
Sbjct: 298 TLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYH 357
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
+ TI T +I G + + LF + S + +L+ A R+ +
Sbjct: 358 YSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIG 417
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYF 385
++ + + LD V ++ + R + + + M ++ F P T ++K +
Sbjct: 418 GVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 95/218 (43%), Gaps = 3/218 (1%)
Query: 250 RFGDGLRLLEEM-ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
R+ +++ E + E+ + P + LI G + KA +LF E+ + VV+ VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 309 NALITALLRSKDIESALSLMDEMIEK-RVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
AL++A RS ++A +L++ M + D TY + ++ + V +L M
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR 248
Query: 368 QRNFVPQTRTVVMLMKYFCQ-NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
++ P T T L+ + + +++ +L L E P + ++ + GQ+
Sbjct: 249 RQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQI 308
Query: 427 HEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKL 464
C ++ G + +F +L +SG+ K+
Sbjct: 309 EMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKM 346
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 41/296 (13%)
Query: 170 NVLLKAFCSQRQMKEARSVFG---KMVSRFSPDTKSMNILLLGFKESGD--VTSVELFYH 224
N +L+++ S + + +F K F P + ILL + D +++V +
Sbjct: 89 NSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLN 148
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
MV G PD VT +I + + C+ GR + L++E+ + P
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPP---------------- 192
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK-RVELDGVTY 343
DT YN L+ L + KD+ +DEM + V+ D V++
Sbjct: 193 -------------------DTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ + S + L K+ F P +MK FC + ++ ++ + E
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+G P + LI GL G+V EA K M++ G A++ L + + G
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 93/228 (40%), Gaps = 6/228 (2%)
Query: 165 GTDEFNVLLKAFC--SQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVEL 221
G F +LL C + V MV+ PD + +I + E+G V +
Sbjct: 121 GRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKD 180
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF--VPTIETITTLIHG 279
E+ ++ PD TYN + CK ++EM R F P + + T LI
Sbjct: 181 LMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDN 239
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+N +A L +++ + D +YN ++ A+ + +M E+ VE D
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
+TY+T+ GL ++ +E + M + P T T LM C+
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 71/173 (41%), Gaps = 14/173 (8%)
Query: 83 LHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQ 142
L SPP ++ L L + + + + E L + +I++ + +
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 143 SFEDTLD-----GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-F 196
+ + + G + D F+ +N ++K FC+ + EA V+ KM
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFL--------YNTIMKGFCTLSKGSEAVGVYKKMKEEGV 296
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
PD + N L+ G ++G V ++ MV G+ PD TY ++ C+KG
Sbjct: 297 EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 16/247 (6%)
Query: 134 MLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV 193
M SK K + D + +DV+ +N ++ +C +A +F +M
Sbjct: 396 MYSKCGKLEDARKVFDSVK--NKDVYT--------WNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 194 -SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG-FSPDNVTYNIRIDTYCKKGRF 251
+ P+ + N ++ G+ ++GD + M K G + T+N+ I Y + G+
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
+ L L +M+ +F+P TI +L+ + A R++ + RNL V NAL
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL 565
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
+S DIE + ++ M K D +T++++ G + L+ +M +
Sbjct: 566 TDTYAKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGI 621
Query: 372 VPQTRTV 378
P T+
Sbjct: 622 TPNRGTL 628
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
VK GF D + N +D Y K G+ D ++ + ++ + + T ++I G
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VYTWNSMITGYCQAGYC 434
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM-IEKRVELDGVTYHT 345
GKA +LF + NL + +N +I+ +++ D A+ L M + +V+ + T++
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNF 389
+ G +++ + EL++KM F+P + T++ L+ C N
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA-CANL 537
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 126/302 (41%), Gaps = 14/302 (4%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
S M+ ++ + + FR M +D + +F F +L+ C+ EA V
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDF---LFPKILQG-CANCGDVEAGKVIHS 205
Query: 192 MVSRF--SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
+V + S + N +L + + G++ F+ M +R D + +N + YC+ G
Sbjct: 206 VVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNG 261
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
+ + + L++EME+ P + T LI G + A L ++ + + D +
Sbjct: 262 KHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR 369
A+I+ L+ + AL + +M V + VT + I SE++ +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 370 NFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
F+ L+ + + +L+ + +++ + K + + +ITG C G +A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 430 FE 431
+E
Sbjct: 438 YE 439
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLD 149
P+ V+F + L + + + F K L A+ H ++ + + + +++ K + + +
Sbjct: 697 PNTVTFNVLLDVYGKAKLFKKVNELFL-LAKRH-GVVDVISYNTIIAAYGKNKDYTNMSS 754
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS-PDTKSMNILLL 208
+ M+ F G + +N LL A+ +QM++ RS+ +M S PD + NI++
Sbjct: 755 AIKNMQ---FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 209 GFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP 268
+ E G + V E+ + G PD +YN I Y G + + L++EM R +P
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 269 TIETITTLI 277
T T L+
Sbjct: 872 DKVTYTNLV 880
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 119/283 (42%), Gaps = 17/283 (6%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
F+++++ + ++EA SV M + PD +L +++ ++ Y+ +
Sbjct: 596 FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRI 655
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLR-LLEEMERRKFVPTIETITTLIHGAGIVQN 285
K G + YN I+ C + D L EEM R F P T L+ G +
Sbjct: 656 RKSGIHWNQEMYNCVINC-CARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT--- 342
K +LF + R+ VVD YN +I A ++KD + S + K ++ DG +
Sbjct: 715 FKKVNELF-LLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAI-----KNMQFDGFSVSL 768
Query: 343 --YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
Y+T+ + +E + ++M + P T +++ + + +D +
Sbjct: 769 EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHM 443
L E G P + + LI G V EA K+M RGR++
Sbjct: 829 LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM--RGRNI 869
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSV 219
G + + +N ++ + E F +M+ F+P+T + N+LL + ++ V
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKV 718
Query: 220 -ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIH 278
ELF + KR D ++YN I Y K + + ++ M+ F ++E TL+
Sbjct: 719 NELFL--LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLD 776
Query: 279 GAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
G + K R + + D YN +I I+ ++ E+ E +
Sbjct: 777 AYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGP 836
Query: 339 DGVTYHTMFLGLMRSTGIEGVSE----LYQKMAQRNFVPQTRTVVMLMKYFCQN--FRLD 392
D +Y+T L+++ GI G+ E L ++M RN +P T L+ +N F
Sbjct: 837 DLCSYNT----LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Query: 393 LSLSLW 398
+ SLW
Sbjct: 893 IKWSLW 898
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 83/208 (39%), Gaps = 2/208 (0%)
Query: 146 DTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNI 205
D L G EE + G T FNVLL + + K+ +F D S N
Sbjct: 681 DELSG--TFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNT 738
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRK 265
++ + ++ D T++ M GFS YN +D Y K + +L+ M++
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
P T +I+ G + + E+ L D YN LI A +E A+
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAV 858
Query: 326 SLMDEMIEKRVELDGVTYHTMFLGLMRS 353
L+ EM + + D VTY + L R+
Sbjct: 859 GLVKEMRGRNIIPDKVTYTNLVTALRRN 886
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 1/218 (0%)
Query: 223 YHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
+ EM++ GF+P+ VT+N+ +D Y K F L +R V I + T+I G
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVI-SYNTIIAAYGK 745
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
++ + V YN L+ A + K +E S++ M + D T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
Y+ M I+ V+++ +++ + P + L+K + ++ ++ L +
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ P L+T L + EA + S M + G
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/317 (15%), Positives = 140/317 (44%), Gaps = 16/317 (5%)
Query: 171 VLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
V+L A+ Q +M+ A S+ M + FSP+ + N L+ G+ + + + + +H +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G PD +Y I+ + + + + +E++R + P + TLI+ + A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 290 RQLFNEIPSRNLVVDTGV---YNALITALLRSKD----IESALSLMDEMIEKRVELDGVT 342
+ ++ TG+ Y++++ +L++ + I+ ++ + L+ +
Sbjct: 439 IKTIEDM--------TGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTS 490
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
+ ++ + ++ ++ L ++ R+ ++ +L+ ++ +L ++ ++N+ +
Sbjct: 491 FSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKM 550
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
E + H +I G+ EA + + G + F ++ R +++G ++
Sbjct: 551 ESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLE 610
Query: 463 KLKELDQMIKNLLSVLP 479
+ + +++ ++P
Sbjct: 611 EACSVLEIMDEQKDIVP 627
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 110/291 (37%), Gaps = 39/291 (13%)
Query: 185 ARSVFGKMVSRFSPDTK-SMNILLLGFKESGDVTSVELFYHEMV-KRGFSPDNVTYNIRI 242
A+ VF +M R T S N LL S VE + E+ K PD +YN I
Sbjct: 125 AQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 243 DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLV 302
C KG F + + L +EI ++ L
Sbjct: 185 KGLCGKGSFTEAV-----------------------------------ALIDEIENKGLK 209
Query: 303 VDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSEL 362
D +N L+ E + M+EK V+ D +Y+ LGL E + L
Sbjct: 210 PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSL 269
Query: 363 YQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC-PHAHALDLLITGLC 421
+ K+ P T ++K F +LD +++ W +EK C P + L+ +C
Sbjct: 270 FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT-WYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 422 SRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
G + A+E K++ + + A + L++ D+ +E+ ++ K
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAK 379
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 126/313 (40%), Gaps = 42/313 (13%)
Query: 95 FEMTLHILTRMRYFDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRM 154
+E T+ L + F+ +L+E + +P++ ++ +++ + FE+ F M
Sbjct: 74 YERTVRRLAAAKKFEWVEEILEEQNK-YPNMSKEGFVARIINLYGRVGMFENAQKVFDEM 132
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKE 212
E FN LL A + ++ +F ++ + S PD S N L+ G
Sbjct: 133 PERNCKRTALS---FNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCG 189
Query: 213 SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG------------------ 254
G T E+ +G PD++T+NI + KG+F +G
Sbjct: 190 KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRS 249
Query: 255 -----------------LRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIP 297
+ L ++++ + P + T T +I G +A + EI
Sbjct: 250 YNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIE 309
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
V+N+L+ A+ ++ D+ESA L E+ KR+ +D + L++ + +
Sbjct: 310 KNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQD 369
Query: 358 GVSELYQKMAQRN 370
E+ + +A+ N
Sbjct: 370 EAEEIVE-LAKTN 381
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 152/372 (40%), Gaps = 29/372 (7%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGK 191
++++ K++S E F + + + G+D +NV++ + +EA +F
Sbjct: 140 NVIMDMYVKHESVESARKVFDQ------ISQRKGSD-WNVMISGYWKWGNKEEACKLFDM 192
Query: 192 MVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRF 251
M D S +++ GF + D+ + ++ M ++ V++N + Y + G
Sbjct: 193 MPEN---DVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAMLSGYAQNGFT 245
Query: 252 GDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
D LRL +M R P T +I + R L I + + ++ V AL
Sbjct: 246 EDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTAL 305
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
+ + +DI+SA + +E+ +R + VT++ M G R + +L+ M +RN
Sbjct: 306 LDMHAKCRDIQSARRIFNELGTQR---NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV 362
Query: 372 VPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFE 431
V L+ + N + L++ + +++ G + + C E +
Sbjct: 363 VSWNS----LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGD 418
Query: 432 CSKQMLERGR-HMSAASFLMLERFLLQSGDI-------DKLKELDQMIKNLLSVLPPSKG 483
C + + + ++ + + L + G++ D++KE D + N L + G
Sbjct: 419 CIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANG 478
Query: 484 HATGSSNLKVKV 495
+ NL K+
Sbjct: 479 DGVETLNLLSKM 490
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 163 EFGTDE----FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTS 218
E GT +N ++ + M AR +F M R + S N L+ G+ +G
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR---NVVSWNSLIAGYAHNGQAAL 380
Query: 219 VELFYHEMVKRGFS-PDNVTYNIRIDTYCKKGRFGD---GLRLLEEMERRKFVPTIETIT 274
F+ +M+ G S PD VT I + + C G D G +++ + + +
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTM-ISVLSAC--GHMADLELGDCIVDYIRKNQIKLNDSGYR 437
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK 334
+LI N +A+++F+E+ R++V YN L TA + D L+L+ +M ++
Sbjct: 438 SLIFMYARGGNLWEAKRVFDEMKERDVVS----YNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 335 RVELDGVTYHTMFLGLMRS 353
+E D VTY ++ R+
Sbjct: 494 GIEPDRVTYTSVLTACNRA 512
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
LF + K GF D N+ +D Y K ++ +++ +RK +I G
Sbjct: 122 LFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKG----SDWNVMISGY 177
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
N +A +LF+ +P ++V + +IT + KD+E+A D M EK V
Sbjct: 178 WKWGNKEEACKLFDMMPENDVVS----WTVMITGFAKVKDLENARKYFDRMPEKSV---- 229
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
V+++ M G ++ E L+ M + P T V+++ +FR D SL+
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVIS--ACSFRADPSLT 283
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 119/296 (40%), Gaps = 7/296 (2%)
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSV 219
+G E N L+ + +++ +R VF M R + S N +L + + G V
Sbjct: 118 LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR---NLSSWNSILSSYTKLGYVDDA 174
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
EM G PD VT+N + Y KG D + +L+ M+ P+ +I++L+
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
+ + + I L D V LI +++ + A + D M K +
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI--- 291
Query: 340 GVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWN 399
V ++++ GL + ++ L +M + P T L + + + +L +
Sbjct: 292 -VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 400 YLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
+ EKG P+ + + +G G A + +M E G +AA+ L + L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 127/318 (39%), Gaps = 21/318 (6%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+N L+ +K+A ++ +M PD + N L G+ G +M
Sbjct: 294 WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMK 353
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++G +P+ V++ K G F + L++ +M+ P T++TL+ G +
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+++ +NL+ D V AL+ +S D++SA+ + + K + +++ M
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCML 469
Query: 348 LGL-MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL----V 402
+G M G EG++ + M + P T ++ C+N L W Y
Sbjct: 470 MGYAMFGRGEEGIAA-FSVMLEAGMEPDAITFTSVLS-VCKNS--GLVQEGWKYFDLMRS 525
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDID 462
G P ++ L G + EA++ + M + +F L S I
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAF-------LSSCKIH 578
Query: 463 KLKELDQMIKNLLSVLPP 480
+ EL ++ L VL P
Sbjct: 579 RDLELAEIAWKRLQVLEP 596
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 119/305 (39%), Gaps = 5/305 (1%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGF 231
KA QR +KEA F K++ +P + N+L+ S D+ + + G
Sbjct: 442 FFKACKKQRAVKEAFR-FTKLI--LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGM 498
Query: 232 SPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ 291
+ D Y I + K G+ + +M + T LI G KA
Sbjct: 499 TADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFG 558
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR--VELDGVTYHTMFLG 349
+ + S+N+ D V+NALI+A +S ++ A ++ EM + ++ D ++ +
Sbjct: 559 AYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
+ +E E+YQ + + + + ++ D + S++ + EK P
Sbjct: 619 CCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKELDQ 469
LI + EAF + +G + S+ L + D K EL +
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYE 738
Query: 470 MIKNL 474
IK++
Sbjct: 739 KIKSI 743
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 102/258 (39%), Gaps = 4/258 (1%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR---FSPDTKSMNILLLGFKESGDVTSVELFYHE 225
FN L+ A + A V +M + PD S+ L+ +G V + Y
Sbjct: 575 FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQM 634
Query: 226 MVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
+ K G Y I +++ K G + + ++M+ + P + LI AG +
Sbjct: 635 IHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+A + + S+ + + T Y++L+ A +KD + AL L +++ ++ T +
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNA 754
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
+ L + E ++ P T T MLM + ++S L + G
Sbjct: 755 LITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Query: 406 YCPHAHALDLLITGLCSR 423
P+ + IT LC R
Sbjct: 815 VSPNL-IMCRCITSLCKR 831
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 128/317 (40%), Gaps = 12/317 (3%)
Query: 74 KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQET---ARTHPSLITLKA 130
+A + F+ L P + + L TR D A+ +L + + P + T
Sbjct: 142 RAQKLFDEMLEEGLEPTVEL-YTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTY-- 198
Query: 131 MSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFG 190
S +L F+ ++ M+E + T N++L + + + V
Sbjct: 199 -STLLKACVDASQFDLVDSLYKEMDERLITP---NTVTQNIVLSGYGRVGRFDQMEKVLS 254
Query: 191 KMV--SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
M+ + PD +MNI+L F G + +E +Y + G P+ T+NI I +Y KK
Sbjct: 255 DMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKK 314
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
+ ++E M + +F T T +I V +A F+++ S + DT +
Sbjct: 315 RMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
Query: 309 NALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQ 368
LI + +S + + + + Y+ + ++ + + +Y +M +
Sbjct: 375 CCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKE 434
Query: 369 RNFVPQTRTVVMLMKYF 385
R V +RT ++++ +
Sbjct: 435 RQCVCDSRTFEIMVEAY 451
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 2/163 (1%)
Query: 266 FVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESAL 325
+ P T L+ G +A++LF+E+ L +Y AL+ A RS I+ A
Sbjct: 120 YQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAF 179
Query: 326 SLMDEMIE-KRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKY 384
S++D+M + + D TY T+ + ++ + V LY++M +R P T T +++
Sbjct: 180 SILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSG 239
Query: 385 FCQNFRLD-LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQV 426
+ + R D + L + LV P ++++++ + G++
Sbjct: 240 YGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKI 282
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKE-SGDVTSVELFYHEMVK 228
N + A S +++ A S +M P+ N L GF S + S+EL Y M++
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQE---PNVFVYNALFKGFVTCSHPIRSLEL-YVRMLR 864
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
SP + TY+ + RFG+ L+ + + F ++ TTLI +
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQ--AHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
AR++F+E+P R D + +++A R D++SA SL ++M EK + T + +
Sbjct: 923 ARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLIN 974
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
G M +E L+ +M ++ + T ++K + QN R +++++ ++E+G P
Sbjct: 975 GYMGLGNLEQAESLFNQMPVKDIISWT----TMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 409 HAHALDLLITGLCSRGQVHEAFECSKQMLERG 440
+ +I+ G + E L+ G
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/313 (18%), Positives = 129/313 (41%), Gaps = 33/313 (10%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSV 219
G + +++L+ F + ++A +F KM+ SP+ + L+ GF + G V
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 220 ELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLI-- 277
++ G +PD V N+ I TY + GRF + ++ +E+RK VP T +++
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSS 361
Query: 278 --------------HGAG---------IVQNA-------GKARQLFNEIPSRNLVVDTGV 307
HG G ++ N A ++ + + ++ +D
Sbjct: 362 LCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYT 421
Query: 308 YNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
Y ++AL R +A+ + +I+++ LD + + L+ L+++
Sbjct: 422 YTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCI 481
Query: 368 QRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVH 427
+ + + +K + R++ + SL + E G P+ +I+GLC +
Sbjct: 482 LEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETE 541
Query: 428 EAFECSKQMLERG 440
+ + ++ ++ G
Sbjct: 542 KVRKILRECIQEG 554
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 120/270 (44%), Gaps = 10/270 (3%)
Query: 161 GREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILL-LGFKESGDVTS 218
G E F +LL+ F +A V+ M S F P+T++MN+++ + FK + +
Sbjct: 103 GCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGA 162
Query: 219 VELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGD--GLRL-LEEMERRKFVPTIETITT 275
+E+F + FS ++I + +C +G GD G+++ L+ M F P E
Sbjct: 163 LEIFEGIRFRNFFS-----FDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQ 217
Query: 276 LIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKR 335
++ +A Q+ + + V V++ L++ RS + + A+ L ++MI+
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSL 395
+ VTY ++ G + ++ + K+ P +++ + + R + +
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEAR 337
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQ 425
++ L ++ P + +++ LC G+
Sbjct: 338 KVFTSLEKRKLVPDQYTFASILSSLCLSGK 367
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 191 KMVSRFS-PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKG 249
K +S+ S P N ++ GF S + Y +M++ G PD++TY + + +
Sbjct: 63 KFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLS 122
Query: 250 RFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYN 309
G L + + + TLIH G ++ AR+LF+E+P +NLV +N
Sbjct: 123 NRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV----TWN 178
Query: 310 ALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
+++ A +S D+ SA + DEM E+ V VT+ +M G ++ E++ +M
Sbjct: 179 SILDAYAKSGDVVSARLVFDEMSERDV----VTWSSMIDGYVKRGEYNKALEIFDQM 231
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 117/284 (41%), Gaps = 18/284 (6%)
Query: 154 MEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKES 213
+E D+F+ N L+ + S R AR +F +M + + + N +L + +S
Sbjct: 139 LEWDLFI--------CNTLIHMYGSFRDQASARKLFDEMPHK---NLVTWNSILDAYAKS 187
Query: 214 GDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIE-T 272
GDV S L + EM +R D VT++ ID Y K+G + L + ++M R E T
Sbjct: 188 GDVVSARLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 273 ITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI 332
+ ++I + + + + I +L + + +LI + I A S+
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 333 EKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLD 392
K E D + ++ + GL I +L+ KM + P T + L+ +
Sbjct: 304 VK--ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Query: 393 LSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
+ + L E G P + ++ L G V +A + +M
Sbjct: 362 EAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 23/244 (9%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
FN+++ + R++ +A +F M R S L+ G+ ++ + + EM
Sbjct: 110 FNIMVDGYVRSRRLWDALKLFDVMPER---SCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE------EMERRKFVPTIETITTLIHGAGI 282
G + VT I G D R+L+ ++E R FV T L+H +
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWD-CRMLQSLAIKLKLEGRVFVST-----NLLHMYCL 220
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVT 342
AR+LF+E+P RNLV +N ++ ++ IE A L D++ EK D V+
Sbjct: 221 CLCLKDARKLFDEMPERNLV----TWNVMLNGYSKAGLIEQAEELFDQITEK----DIVS 272
Query: 343 YHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV 402
+ TM G +R ++ Y +M + P +V L+ ++ L L +V
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIV 332
Query: 403 EKGY 406
++G+
Sbjct: 333 KRGF 336
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+N++ +A+ R+ + A + + +P + IL+ G + ++ +M
Sbjct: 168 YNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDM 227
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDG-LRLLEEMERR--KFVPTIETITTLIHGAGIV 283
+GF D V Y+ + C K DG L+L +E++ + FV L+ G +
Sbjct: 228 AVKGFVVDPVVYSYLM-MGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMK 286
Query: 284 QNAGKARQLFNEIPSRNLVV--DTGVYNALITALLRSKDIESALSLMDEMIE-----KRV 336
+ +A + + E N V YN ++ AL + + AL L D + + + +
Sbjct: 287 EMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHL 346
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
++ T++ M G E E++++M P T + LM C N L +
Sbjct: 347 AVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEK 406
Query: 397 LWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLL 456
L+ + EK P + LL+ G++ E K M+E + A + L+ L+
Sbjct: 407 LYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLI 466
Query: 457 QSGDIDKLKE-LDQMIKNL 474
++G +D K D M+ L
Sbjct: 467 KAGKLDDAKSFFDMMVSKL 485
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 8/169 (4%)
Query: 91 SHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS----LITLKAMSIMLSKIAKYQSFED 146
S +++ L L+ FD+A L + H + L ++M++ FE+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 147 TLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNI 205
++ FR+M + T FN L+ C + EA ++G+M + PD + +
Sbjct: 369 AMEVFRQMGD---FKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGL 425
Query: 206 LLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDG 254
L+ + G + +Y MV+ P+ YN D K G+ D
Sbjct: 426 LMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDA 474
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 27/327 (8%)
Query: 172 LLKAFCSQRQMKEARSVFGKMVS---RFSPDT-KSMNILLLGFKESGDVTSVELFYHEMV 227
+L AF + +K+ RS+ +V PD S+N + + + G V + ++ + +M
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKCGQVATAKILFDKMK 284
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
SP+ + +N I Y K G + + + EM + P +IT+ I V +
Sbjct: 285 ----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLE 340
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
+AR ++ + + D + +ALI + +E A + D +++ D V + M
Sbjct: 341 QARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMI 396
Query: 348 LGL-MRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
+G + E +S LY+ M + P T + L+ + + +N + +
Sbjct: 397 VGYGLHGRAREAIS-LYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQM-LERGRHMSAASFLMLERFLLQSGDIDKLK 465
P +I L G + +A+E K M ++ G + A LL + +
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA--------LLSACKKHRHV 507
Query: 466 ELDQ-MIKNLLSVLPPSKGHATGSSNL 491
EL + + L S+ P + GH SNL
Sbjct: 508 ELGEYAAQQLFSIDPSNTGHYVQLSNL 534
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 11/232 (4%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
N + F S M+ AR VF + R D S N L+ G+K+ G+ Y M
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVR---DLVSWNCLINGYKKIGEAEKAIYVYKLMESE 251
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
G PD+VT + + G G E ++ TI + L+ + +A
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
R++F+ + R +V + +I+ R ++ + L D+M EK D V ++ M G
Sbjct: 312 RRIFDNLEKRTIV----SWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGG 363
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
+++ + L+Q+M N P T++ + Q LD+ + + Y+
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
N +L + + + EA +F M+ D + N +++GF + G + + + EM +R
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGF---DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
+ V++N I + + GRF D L + EM+ + P T+ +L++ + + +
Sbjct: 222 ----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQG 277
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
R + I +++ V ALI + IE L++ + +K++ +++M LG
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS----CWNSMILG 333
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
L + E +L+ ++ + P + + +
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFI 363
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 26/326 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNI----LLLGFKESGDVTSVELFYH 224
+N +++ F + A S+F M+ SP K + + + G +
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCS-SPSVKPQRLTYPSVFKAYGRLGQARDGRQLHG 150
Query: 225 EMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQ 284
++K G D+ N + Y G + R+ M V ++I G
Sbjct: 151 MVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV----AWNSMIMGFAKCG 206
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
+A+ LF+E+P RN V +N++I+ +R+ + AL + EM EK V+ DG T
Sbjct: 207 LIDQAQNLFDEMPQRNGVS----WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT-- 260
Query: 345 TMFLGLMRSTGIEGVSE----LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
+ L+ + G SE +++ + + F + V L+ +C+ ++ L+++
Sbjct: 261 --MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGD 460
+K + +I GL + G A + ++ G + SF+ + SG+
Sbjct: 319 APKK----QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 461 IDKLKELDQMIKNLLSVLPPSKGHAT 486
+ + E +++K ++ PS H T
Sbjct: 375 VHRADEFFRLMKEKY-MIEPSIKHYT 399
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 181 QMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNI 240
+M AR+ F +M R S L+ G+ G++ + +M D V YN
Sbjct: 128 KMGCARNAFDEMPHR---SEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNA 181
Query: 241 RIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRN 300
+D + K G RL +EM + T+ T TT+IHG +++ AR+LF+ +P RN
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 301 LVVDTGVYNALITALLRSKDIESALSLMDEM-IEKRVELDGVTYHTMFLGLMRSTGIEGV 359
LV +N +I ++K + + L EM ++ D VT ++ L + TG +
Sbjct: 238 LV----SWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV-LPAISDTGALSL 292
Query: 360 SELYQKMAQRNFVP---QTRTVVMLMKYFCQNFRL---------DLSLSLWNYLVEKGYC 407
E QR + + T ++ M C + ++ WN ++ GY
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH-GYA 351
Query: 408 PHAH---ALDLLIT 418
+ + ALDL +T
Sbjct: 352 LNGNARAALDLFVT 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 185 ARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR-GFSPDNVTYNIRID 243
AR +F + R D+ N ++ + E+ Y ++ K F+PDN T+
Sbjct: 29 ARKLFDQRPQR--DDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTK 86
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVV 303
+ GL+L ++ R F + T ++ G AR F+E+P R+ V
Sbjct: 87 SCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 304 ----------------------------DTGVYNALITALLRSKDIESALSLMDEMIEKR 335
D +YNA++ ++S D+ SA L DEM K
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT 206
Query: 336 VELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQN 388
V +T+ TM G I+ +L+ M +RN V ++ +CQN
Sbjct: 207 V----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWN----TMIGGYCQN 251
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 135/318 (42%), Gaps = 14/318 (4%)
Query: 120 RTHPSLITLKAMSIMLSKIAKYQSFE---DTLDGFRRMEEDVFVGREFGTDEFNVLLKAF 176
R PS TL A+ ++L + K QS E + L RM G F +L+ A
Sbjct: 138 RCVPSAYTLNALLLVL--VRKRQSLELVPEILVKACRM------GVRLEESTFGILIDAL 189
Query: 177 CSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVEL--FYHEMVKRGFSP 233
C ++ A + M D + + LL + D + ++ + ++ K FSP
Sbjct: 190 CRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSP 249
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
Y + + + GR + + +L +M+ + P + T ++ G ++ KA +LF
Sbjct: 250 GLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLF 309
Query: 294 NEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRS 353
+E+ L D YN I L + DIE AL +M M + E + VTY+ + L+++
Sbjct: 310 DELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKA 369
Query: 354 TGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHAL 413
+ L+++M + T +++ + + + + L + +
Sbjct: 370 GDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRI 429
Query: 414 DLLITGLCSRGQVHEAFE 431
+ +I+ LC +G + +A E
Sbjct: 430 EEVISRLCEKGLMDQAVE 447
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 21/246 (8%)
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDE-FNVLLKAFCSQRQMKEARSVFGKMVS----R 195
YQ +D ++ V R G + +N ++ F ++ A ++F MV+
Sbjct: 188 YQEMDDIVN-------QVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLE 240
Query: 196 FSPDTKSMNILLLGFKESGD--------VTSVELFYHEMVKRGFSPDNVTYNIRIDTYCK 247
P ++ +IL G+ + +V + +MV G PD N + Y
Sbjct: 241 CRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVL 300
Query: 248 KGRFGDGLRLLEEMER-RKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
D LR+ +M P T LIHG AR+L +E+ + V +
Sbjct: 301 SLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGK 360
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKM 366
YN+L+ A S +I+ A+ + EMIE +D ++Y T+ R + + L + +
Sbjct: 361 SYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEML 420
Query: 367 AQRNFV 372
++ V
Sbjct: 421 REKQLV 426
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
Query: 292 LFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMI-EKRVELDGV--TYHTMFL 348
+ N++ S + + +YN++I ++ + A+++ M+ K +E TYH +F
Sbjct: 194 IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFK 253
Query: 349 GLM--------RSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
L+ +E V L+++M P + L+K + + ++ +L +++
Sbjct: 254 ALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQ 313
Query: 401 LVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+ C P++ D LI GLC++G+ A E +M +G + S+ L SG
Sbjct: 314 MSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSG 373
Query: 460 DI-DKLKELDQMIKN 473
+I D +K L +MI+N
Sbjct: 374 EIDDAVKCLWEMIEN 388
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 146/349 (41%), Gaps = 22/349 (6%)
Query: 90 PSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPSLITLK-AMSIMLSKIAKYQSFEDTL 148
P ++ L +++ DKA + + + S ++ + AM + + ++AK Q F D
Sbjct: 28 PGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSD-- 85
Query: 149 DGFRRMEEDVFVGREFGTDEF-NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTK-SMNIL 206
+ E + T+ F + L++++ A +F +M +P T S N L
Sbjct: 86 --IEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNAL 143
Query: 207 LLGFKESGDVTSVELFYHEMVKR--GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERR 264
L S V + E +R +PD ++Y + I +YC G+ + ++ +ME +
Sbjct: 144 LAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVK 203
Query: 265 KFVPTIETITTL---IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNA-LITALLRSKD 320
TI TT+ ++ G+V +A L+ E+ ++ +D VYN L+ A S
Sbjct: 204 GVEVTIIAFTTILGSLYKNGLVD---EAESLWIEMVNKGCDLDNTVYNVRLMNAAKESP- 259
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
E LM+EM ++ D V+Y+ + + ++Y+ + Q P T
Sbjct: 260 -ERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ----PNAATFRT 314
Query: 381 LMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEA 429
L+ + C N D L+++ P L GL ++ +A
Sbjct: 315 LIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA 363
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 14/324 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N+L+K C + A VF +M PD S IL+ GF G + + M
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 228 KR----GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
R G D V Y I +D C G D + +L ++ R+ + G
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 284 QNAG--KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ G + ++L E R + Y+A+ T L + ++ M K E
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 342 TYHTMFLGLMRSTGI-EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
Y L R+ + E VS + ++M Q + +P +L+K C + + ++
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 401 LVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+ ++ C + L+ GLC GQ EA + ++ML + ++ M+ + L
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC--- 451
Query: 460 DIDKLKELDQMIKNLLS--VLPPS 481
D+D+ E ++ ++S ++P S
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPES 475
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGK--MVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+ +KA C ++KEA SV K M P N+L+ G + G + +M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 227 VKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
K+ + TY +D C+ G+F + +++EEM + P +ET +I G +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITAL 315
+A E+ S+++V ++ V+ AL ++
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 14/324 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKM-VSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N+L+K C + A VF +M PD S IL+ GF G + + M
Sbjct: 155 LNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMF 214
Query: 228 KR----GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
R G D V Y I +D C G D + +L ++ R+ + G
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 284 QNAG--KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGV 341
+ G + ++L E R + Y+A+ T L + ++ M K E
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 342 TYHTMFLGLMRSTGI-EGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
Y L R+ + E VS + ++M Q + +P +L+K C + + ++
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKK 394
Query: 401 LVEKGYC-PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
+ ++ C + L+ GLC GQ EA + ++ML + ++ M+ + L
Sbjct: 395 MSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLC--- 451
Query: 460 DIDKLKELDQMIKNLLS--VLPPS 481
D+D+ E ++ ++S ++P S
Sbjct: 452 DMDRRYEAVMWLEEMVSQDMVPES 475
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGK--MVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+ +KA C ++KEA SV K M P N+L+ G + G + +M
Sbjct: 336 YGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKM 395
Query: 227 VKR-GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
K+ + TY +D C+ G+F + +++EEM + P +ET +I G +
Sbjct: 396 SKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDR 455
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITAL 315
+A E+ S+++V ++ V+ AL ++
Sbjct: 456 RYEAVMWLEEMVSQDMVPESSVWKALAESV 485
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 16/251 (6%)
Query: 125 LITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKE 184
L++ + MLS + K +D + M E+ EF + +++ ++ Q +E
Sbjct: 255 LLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEF---TYTLVVSSYAKQGFKEE 311
Query: 185 ARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRID 243
A FG+M S F P+ + + ++ ++GD Y +M +G P N T +
Sbjct: 312 ALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLS 371
Query: 244 TYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK------ARQLFNEIP 297
Y K + L L +MER K +P E I LI ++ GK A+ +F E
Sbjct: 372 LYYKTENYPKALSLFADMERNK-IPADEVIRGLI-----IRIYGKLGLFHDAQSMFEETE 425
Query: 298 SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
NL+ D Y A+ L S ++ AL +++ M + + L Y M + ++
Sbjct: 426 RLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVD 485
Query: 358 GVSELYQKMAQ 368
E ++ +++
Sbjct: 486 CAEEAFRALSK 496
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 107/235 (45%), Gaps = 8/235 (3%)
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQ---LFNEIPS 298
ID Y + G D L E + P TI+ L++ + N GK R+ +
Sbjct: 711 IDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNA---LTNRGKHREAEHISRTCLE 767
Query: 299 RNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEG 358
+N+ +DT YN LI A+L + ++ A + + M V TY+TM R ++
Sbjct: 768 KNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 359 VSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLIT 418
E++ + + ++ ++ + ++ +LSL++ + +KG P + ++++
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVK 887
Query: 419 GLCSRGQVHEAFECSKQMLER-GRHMSAASFLMLERFLLQSGDIDKLKELDQMIK 472
+C+ ++H + Q +ER GR +++L L + +S + ++ ++K
Sbjct: 888 -ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVK 941
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 25/331 (7%)
Query: 162 REFGTDEFNVLLKAFCS-------------QRQMKEARSVFGKMVSRFS--PDTKSMNIL 206
R G+D+ ++ +F + QR ++ R F M + S P I+
Sbjct: 135 RRQGSDDMRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSYRPSVVVYTIV 194
Query: 207 LLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKF 266
L + + G + E + EM++ G PD V + TY + GR L + ++ R+
Sbjct: 195 LRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRI 254
Query: 267 VPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALS 326
+ + ++ GK L+ E+ + + Y ++++ + E AL
Sbjct: 255 LLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALK 314
Query: 327 LMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFC 386
EM + VTY ++ +++ E LY+ M + VP T ++ +
Sbjct: 315 AFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYY 374
Query: 387 QNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSR-GQVHEAFECSKQMLERGRHMS- 444
+ +LSL+ + E+ P + LI + + G H+A + M E ++
Sbjct: 375 KTENYPKALSLFADM-ERNKIPADEVIRGLIIRIYGKLGLFHDA----QSMFEETERLNL 429
Query: 445 ---AASFLMLERFLLQSGDIDKLKELDQMIK 472
++L + + L SG++ K ++ +M+K
Sbjct: 430 LADEKTYLAMSQVHLNSGNVVKALDVIEMMK 460
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 87/440 (19%), Positives = 170/440 (38%), Gaps = 52/440 (11%)
Query: 65 LFASHSNGLKALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFDKAWMLLQETARTHPS 124
L+ N KAL F + ++ P V + + I ++ F A + +ET R +
Sbjct: 372 LYYKTENYPKALSLFA-DMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLN-- 428
Query: 125 LITLKAMSIMLSKI-AKYQSFEDTLDGFRRME-EDVFVGREFGTDEFNVLLKAFCSQRQM 182
L+ + + +S++ + LD M+ D+ + R F + V+L+ + + +
Sbjct: 429 LLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR-FA---YIVMLQCYAKIQNV 484
Query: 183 KEARSVFGKMVSRFSPDTKSMNILL-------LGFKESGDVTSVELFYHEMVKRGFSPDN 235
A F + PD S N +L LG K G F +++ D
Sbjct: 485 DCAEEAFRALSKTGLPDASSCNDMLNLYTRLNLGEKAKG-------FIKQIMVDQVHFDI 537
Query: 236 VTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFN- 294
Y + YCK+G + L+ +M R V + TL IV K + N
Sbjct: 538 ELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNV 597
Query: 295 ---EIPSRNLVVD------------------------TGVYNALITALLRSKDIESALSL 327
++ + L+++ + N +I++ +R D+ A +
Sbjct: 598 SQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMI 657
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQ 387
D +I + ++ T T+ R ++ LY A + P + ++ + +
Sbjct: 658 ADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLA-AGESKTPGKSVIRSMIDAYVR 716
Query: 388 NFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAAS 447
L+ + L+ EKG P A + +L+ L +RG+ EA S+ LE+ +
Sbjct: 717 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVG 776
Query: 448 FLMLERFLLQSGDIDKLKEL 467
+ L + +L++G + E+
Sbjct: 777 YNTLIKAMLEAGKLQCASEI 796
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 115/300 (38%), Gaps = 1/300 (0%)
Query: 165 GTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFY 223
G ++ A+ +++A +F + + P +++IL+ G E
Sbjct: 703 GKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHIS 762
Query: 224 HEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIV 283
+++ D V YN I + G+ + E M +I+T T+I G
Sbjct: 763 RTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRG 822
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
KA ++F+ L +D +Y +I + + ALSL EM +K ++ +Y
Sbjct: 823 LQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSY 882
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
+ M S V EL Q M + T + L++ + ++ + + + E
Sbjct: 883 NMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKE 942
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDK 463
KG L++ L G + EA +M E G +A + + + GD +K
Sbjct: 943 KGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEK 1002
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 9/239 (3%)
Query: 218 SVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE-MERRKFVPTIETITTL 276
S+ LF + + P+ V+YN I+ +C +G + L + + F P+ T L
Sbjct: 199 SISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHL 258
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRV 336
G G A L E+ S+ D+ VYN LI L D + A+ DE+ K
Sbjct: 259 TKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCT 318
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
DG+ T + E Y+ + + F T +L++ F + + D + +
Sbjct: 319 VYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWA 378
Query: 397 LWNYLVEKGYCPHAHALDLLITGL----CSR-GQVHEAFECSKQMLERGRHMSAASFLM 450
L+N +++ P+ +++ G+ C + G+ EA K++ G +++ F+M
Sbjct: 379 LFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKV---GSKVTSKPFVM 434
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 130/314 (41%), Gaps = 31/314 (9%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSR--FSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+N ++ A C + + EA V+ +++ F+P + + L G ++G + EM
Sbjct: 219 YNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREM 278
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
+ +G + D+ YN I Y G F + +E++ + V T + N
Sbjct: 279 LSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGND 338
Query: 287 GKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTM 346
+A + + + + + N L+ L+ + A +L +EM++ + ++ ++
Sbjct: 339 KEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSD 398
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML-MKYFCQNFRLDLSLSLWNYLVEKG 405
+G+M V+E + KM + F T + K + F +D YL G
Sbjct: 399 TVGIM-------VNECF-KMGE--FSEAINTFKKVGSKVTSKPFVMD-------YL---G 438
Query: 406 YCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-LMLERFLLQSGDIDKL 464
YC ++T C +G + EA + + R A S M++ +L D +
Sbjct: 439 YC-------NIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAV 491
Query: 465 KELDQMIKNLLSVL 478
K LD+M+ L V+
Sbjct: 492 KMLDRMVDVNLRVV 505
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS-PDNVTYNIRIDTYCKKGRFGDGLR 256
PD N L+ G+ ES + + + EM+++GF PD+ ++ I G +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 257 -----LLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNAL 311
L +E FV T T+ + G G V+ A R++F+E+ NLV +NA+
Sbjct: 128 MHCQALKHGLESHLFVGT--TLIGMYGGCGCVEFA---RKVFDEMHQPNLVA----WNAV 178
Query: 312 ITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNF 371
ITA R D+ A + D+M+ + + +++ M G +++ +E ++ +M R+
Sbjct: 179 ITACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDD 234
Query: 372 VPQTRTVV 379
V + +V
Sbjct: 235 VSWSTMIV 242
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/308 (19%), Positives = 131/308 (42%), Gaps = 14/308 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+NV+L + +++ A+ +F +M R D S + +++G +G L++ E+ +
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHR---DDVSWSTMIVGIAHNGSFNESFLYFRELQR 262
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
G SP+ V+ + + G F G L +E+ + + LI N
Sbjct: 263 AGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
AR +F + + +V + ++I L E A+ L +EM V DG+++ ++
Sbjct: 323 ARLVFEGMQEKRCIVS---WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLH 379
Query: 349 GLMRSTGIEGVSELYQKMAQRNFV-PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYC 407
+ IE + + +M + + P+ ++ + ++ +L + ++++ +
Sbjct: 380 ACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA---YDFICQMPIP 436
Query: 408 PHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDIDKLKEL 467
P A L+ S G + E E KQ L ++ ++L +G K K++
Sbjct: 437 PTAIVWRTLLGACSSHGNI-ELAEQVKQRLNELDPNNSGDLVLLSNAYATAG---KWKDV 492
Query: 468 DQMIKNLL 475
+ K+++
Sbjct: 493 ASIRKSMI 500
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%)
Query: 198 PDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRL 257
PDT +N+++ + + +V + EM G P+ TY+ + C+KGR G GL
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 258 LEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
+EM+ + VP LI + + +A ++ ++ + +L D YN ++T L R
Sbjct: 281 YKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCR 340
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTM 346
AL +++E ++ + Y T+
Sbjct: 341 GGRGSEALEMVEEWKKRDPVMGERNYRTL 369
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 25/252 (9%)
Query: 139 AKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM--KEARSVFGKMV--S 194
K +F +TL +EE + E +N +++ FC R+ A V+ KM+
Sbjct: 121 GKRNNFVETL-----IEEVIAGACEMSVPLYNCIIR-FCCGRKFLFNRAFDVYNKMLRSD 174
Query: 195 RFSPDTKSMNILLLGFKESGDVTSVELFY--------HEMVKRGFSPDNVTYNIRIDTYC 246
PD ++ +LL + + +V Y +M G PD N+ I Y
Sbjct: 175 DSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYA 234
Query: 247 KKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTG 306
K + +R+ +EM P T + L+ G G+ + E+ + +V +
Sbjct: 235 KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGS 294
Query: 307 VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR----STGIEGVSEL 362
Y LI +L + ++ A+ ++ +M+ + D +TY+T+ L R S +E V E
Sbjct: 295 CYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEW 354
Query: 363 YQK---MAQRNF 371
++ M +RN+
Sbjct: 355 KKRDPVMGERNY 366
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 2/172 (1%)
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
R L ++ S ++ DT V N +I A + +++ A+ + EM E + TY + G
Sbjct: 208 RSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKG 267
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPH 409
+ + Y++M + VP ++L+ RLD ++ + ++ P
Sbjct: 268 VCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPD 327
Query: 410 AHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF--LMLERFLLQSG 459
+ ++T LC G+ EA E ++ +R M ++ LM E + L G
Sbjct: 328 MLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNKG 379
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 13/261 (4%)
Query: 211 KESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTI 270
K++GD+T V+ + + ++ G D T N I Y L+L +E +R V
Sbjct: 128 KKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV--- 184
Query: 271 ETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDE 330
T LI G + +AR+LF+ +P R+LV +N+LI+ + A+ L DE
Sbjct: 185 -TYNVLIDGLVKAREIVRARELFDSMPLRDLV----SWNSLISGYAQMNHCREAIKLFDE 239
Query: 331 MIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFR 390
M+ ++ D V + +S + ++ ++ + L+ ++ +
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 391 LDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLM 450
+D ++ ++ +K + +ITGL G + ++M+ G +F+
Sbjct: 300 IDTAMEIFELCSDKTL----FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFIS 355
Query: 451 LERFLLQSGDIDKLKEL-DQM 470
+ SG +D+ + L DQM
Sbjct: 356 VLVGCSHSGLVDEARNLFDQM 376
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 7/198 (3%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+NVL+ R++ AR +F M R D S N L+ G+ + + EMV
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLR---DLVSWNSLISGYAQMNHCREAIKLFDEMVA 242
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK 288
G PDNV + + G + G + + +R++ T L+
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
A ++F + L +NA+IT L + E + +M+ ++ DGVT+ ++ +
Sbjct: 303 AMEIFELCSDKTLFT----WNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 349 GLMRSTGIEGVSELYQKM 366
G S ++ L+ +M
Sbjct: 359 GCSHSGLVDEARNLFDQM 376
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 8/244 (3%)
Query: 196 FSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGL 255
F D MN +L + + V + + +M +R D V++N I Y G + L
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEIL 230
Query: 256 RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
+LL M P +T + +G + + R L +I VD + ALIT
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
Query: 316 LRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQT 375
L+ E++ +++ + K V V + M GLMR E ++ +M Q +
Sbjct: 291 LKCGKEEASYRVLETIPNKDV----VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 376 RTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQ 435
+ ++ Q DL S+ Y++ GY AL+ LIT G + ++ ++
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 436 MLER 439
M ER
Sbjct: 407 MNER 410
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 105/240 (43%), Gaps = 13/240 (5%)
Query: 199 DTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLL 258
D M +L + + G+V+ E ++ M++R V +N+ I Y + GR D
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNI----VAWNVMIGCYARNGRVTDAFLCF 321
Query: 259 EEM-ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLR 317
++M E+ P + T L+ + I++ R + R + + ALI
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 318 SKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRT 377
++SA + D M EK V ++++++ +++ EL+Q++ + VP + T
Sbjct: 378 CGQLKSAEVIFDRMAEKNV----ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTT 433
Query: 378 VVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQML 437
+ ++ + ++ L + Y+V+ Y + L+ L+ G + +A +C +L
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 120/277 (43%), Gaps = 30/277 (10%)
Query: 173 LKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFS 232
L+ F R M++A +F +M D N+++ GF G FY MV G
Sbjct: 71 LRGFADSRLMEDALQLFDEMNK---ADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 233 PDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQL 292
D TY I + +G ++ + + FV + +LI + A A ++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 293 FNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMR 352
F E+P R++V +N++I+ L D S+L L EM++ + D + TM
Sbjct: 188 FEEMPERDIV----SWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD--RFSTM------ 235
Query: 353 STGIEGVSELYQ-KM-------AQRNFVPQTRTVVM--LMKYFCQNFRLDLSLSLWNYLV 402
+ + S +Y KM A R+ + +VM ++ + + + + ++N ++
Sbjct: 236 -SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI 294
Query: 403 EKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLER 439
++ A +++I G+V +AF C ++M E+
Sbjct: 295 QRNIV----AWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 115/305 (37%), Gaps = 49/305 (16%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+N ++ + + AR VF M R D S N +++G+ + G++ FY E +
Sbjct: 116 WNNMVSGYVKSGMLVRARVVFDSMPER---DVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 229 RGFSPDNVTY------------------------------NIR-----IDTYCKKGRFGD 253
G + ++ N+ ID Y K G+
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 254 GLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALIT 313
R +EM V I TTLI G + + A +LF E+P +N V + ALI
Sbjct: 233 AKRCFDEMT----VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPV----SWTALIA 284
Query: 314 ALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVP 373
+R AL L +MI V+ + T+ + + E++ M + N P
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 374 QTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECS 433
+ L+ + ++ L+ S ++ +K C + +I+ L G H+A
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF---WNTMISALAQHGLGHKALRML 401
Query: 434 KQMLE 438
M++
Sbjct: 402 DDMIK 406
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 39/252 (15%)
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
+D Y K G+ ++ EE R +I LI+G ++ A LF +P RN
Sbjct: 168 VDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERN- 226
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+G ++ LI + S ++ A L + M EK V V++ T+ G ++ E
Sbjct: 227 ---SGSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYETAIS 279
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY--------------- 406
Y +M ++ P T+ ++ ++ L + + Y+++ G
Sbjct: 280 TYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYA 339
Query: 407 ------CP--------HAHALDL--LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLM 450
C H L +I G G+ H+A +C +QM+ G FL
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 451 LERFLLQSGDID 462
+ L S ++D
Sbjct: 400 VLTACLNSSEVD 411
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 109/261 (41%), Gaps = 10/261 (3%)
Query: 203 MNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEME 262
+N L+ G E+ S + M++ G PD +T+ + + K G G R L
Sbjct: 94 LNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLG-RALHAAT 152
Query: 263 RRKFVPTIETIT-TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
+ FV + +L+ A Q+F E P R ++N LI R+KD+
Sbjct: 153 LKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDM 212
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVML 381
A +L M E+ + ++ T+ G + S + +L++ M ++N V T L
Sbjct: 213 HMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT----TL 264
Query: 382 MKYFCQNFRLDLSLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGR 441
+ F Q + ++S + ++EKG P+ + + +++ G + +L+ G
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 442 HMSAASFLMLERFLLQSGDID 462
+ A L + G++D
Sbjct: 325 KLDRAIGTALVDMYAKCGELD 345
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/301 (18%), Positives = 123/301 (40%), Gaps = 30/301 (9%)
Query: 141 YQSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDT 200
+Q FE++ D R +E + + +NVL+ +C + M A ++F M R ++
Sbjct: 181 FQVFEESPD--RIKKESILI--------WNVLINGYCRAKDMHMATTLFRSMPER---NS 227
Query: 201 KSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEE 260
S + L+ G+ +SG++ + + M ++ V++ I+ + + G + + E
Sbjct: 228 GSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYETAISTYFE 283
Query: 261 MERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKD 320
M + P TI ++ G ++ I + +D + AL+ + +
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 321 IESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVM 380
++ A ++ M K D +++ M G + +++M P +
Sbjct: 344 LDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 381 LMKYFCQNFRLDLSLSLW-----NYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQ 435
++ + +DL L+ + +Y +E + +DLL G+++EA E +
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA----GKLNEAHELVEN 455
Query: 436 M 436
M
Sbjct: 456 M 456
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 122/316 (38%), Gaps = 14/316 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
+ LL +C + ++A + KM +P + S N L+ + ++G+ V E+
Sbjct: 126 YGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELK 185
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVP----TIETITTLIHGAGIV 283
PD+ TYN+ + R++EEM R V T + ++ AG+
Sbjct: 186 AENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLS 245
Query: 284 QNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTY 343
Q A KA Q E+ +N D Y LIT R + + + + V Y
Sbjct: 246 QKAEKALQ---ELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAY 302
Query: 344 HTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVE 403
M L++ + G L+++ R V +L+ + Q + + L
Sbjct: 303 LNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPR 362
Query: 404 KGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRH------MSAASFLMLERFLLQ 457
+G +A ++ + G + A EC + + G+ S + L + Q
Sbjct: 363 RGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQ 422
Query: 458 SGDIDKLKELDQMIKN 473
D++ + L +++KN
Sbjct: 423 KKDVNGAENLLEILKN 438
>AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein / CBS domain-containing protein |
chr5:3374443-3377332 REVERSE LENGTH=580
Length = 580
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 181 QMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRG-FSPDNVTYN 239
+++ A+ +G++ +T MN +L G++ +HEM + G D+++Y
Sbjct: 64 EVEAAKKRYGRL------NTIVMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYA 117
Query: 240 IRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA-GIVQNAGKARQLFNEIPS 298
+ K R + ++LE +E T + ++LI+G + NAG R+ N + +
Sbjct: 118 TILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRA-NGLLA 176
Query: 299 RN--LVVDTG-----VYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLM 351
R L++D G +YN L+ + S+ ++A++L+DEM+ R+E D +TY+T+ +
Sbjct: 177 RYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACI 236
Query: 352 RSTGIEGVSELYQKMAQR------NFV-PQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEK 404
+ ++ + + M ++ +F+ P T L+K F L LSL +E
Sbjct: 237 KCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDL---LSLQEIFLEM 293
Query: 405 GYC 407
C
Sbjct: 294 KLC 296
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 24/258 (9%)
Query: 132 SIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEFNV-----LLKAFCSQRQMKEAR 186
SI + I K +D +M E + G GT + + LL A + ++ A
Sbjct: 113 SISYATILKGLGKARRIDEAFQMLETIEYGTAAGTPKLSSSLIYGLLDALINAGDLRRAN 172
Query: 187 SVFGK----MVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRI 242
+ + ++ +P N+L+ G+ S + EM++ PD +TYN I
Sbjct: 173 GLLARYDILLLDHGTPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLI 232
Query: 243 DTYCKKGRFGDGLRLLEEMERRK-------FVPTIETITTLIHGAGIVQNAGKARQLFNE 295
K G ++ +M+ + P + T TTL+ G G + +++F E
Sbjct: 233 HACIKCGDLDAAMKFFNDMKEKAEEYYDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLE 292
Query: 296 IP-SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT--MFLGLMR 352
+ N+ +D + A++ A+L+ AL + E++ KR + V ++L +MR
Sbjct: 293 MKLCENVFIDRTAFTAVVDAMLKCGSTSGALCVFGEIL-KRSGANEVLRPKPHLYLSMMR 351
Query: 353 STGIEG----VSELYQKM 366
+ ++G V LY ++
Sbjct: 352 AFAVQGDYGMVRNLYLRL 369
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
F L+KA + +S+ G V S D N L+ + GD+ S + +
Sbjct: 134 FPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAG 287
++ D V++N I+ + +KG L L ++ME + T+ ++ ++N
Sbjct: 194 EK----DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 288 KARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMF 347
RQ+ + I + V+ + NA++ + IE A L D M EK D VT+ TM
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTML 305
Query: 348 LGLMRSTGIEGVSELYQKMAQRNFV 372
G S E E+ M Q++ V
Sbjct: 306 DGYAISEDYEAAREVLNSMPQKDIV 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 140/325 (43%), Gaps = 24/325 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLG-FKESGDVTSVELFYHEMV 227
+N ++ F + +A +F KM S D K+ ++ ++G + ++E + V
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESE---DVKASHVTMVGVLSACAKIRNLE--FGRQV 254
Query: 228 KRGFSPDNVTYNIRI-----DTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGI 282
+ V N+ + D Y K G D RL + ME + V T TT++ G I
Sbjct: 255 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV----TWTTMLDGYAI 310
Query: 283 VQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEM-IEKRVELDGV 341
++ AR++ N +P +++V +NALI+A ++ AL + E+ ++K ++L+ +
Sbjct: 311 SEDYEAAREVLNSMPQKDIV----AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQI 366
Query: 342 TYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYL 401
T + + +E ++ + + L+ + + L+ S ++N +
Sbjct: 367 TLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
Query: 402 VEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSGDI 461
++ +I GL G +EA + +M E + +F + +G +
Sbjct: 427 EKRD----VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 462 DKLKELDQMIKNLLSVLPPSKGHAT 486
D+ + L +++ ++P K +A
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYAC 507
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 22/256 (8%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVT-SVELFYHEMV 227
+N L+ ++Q+ EA +F KM + D S ++ GF G+++ VELF
Sbjct: 344 WNSLITGLVQRKQISEAYELFEKMPGK---DMVSWTDMIKGFSGKGEISKCVELF----- 395
Query: 228 KRGFSP--DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
G P DN+T+ I + G + + L +M +++ P T ++++ + +
Sbjct: 396 --GMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLAD 453
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
+ Q+ + N+V D V N+L++ + + A + + E + V+Y+T
Sbjct: 454 LIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI----VSYNT 509
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW-----NY 400
M G + + +L+ + P T + L+ +DL + +Y
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSY 569
Query: 401 LVEKGYCPHAHALDLL 416
+E G +A +DLL
Sbjct: 570 NIEPGPDHYACMVDLL 585
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 239 NIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPS 298
N +I + + G + + +M R V I I+ + KA Q+F+E+P
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKM----SKAWQVFDEMPV 109
Query: 299 RNLVVDTGVYNALITALLRSK-DIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIE 357
R T YNA+ITA++++K D+ A L ++ EK + V+Y TM G +R+ +
Sbjct: 110 R----VTTSYNAMITAMIKNKCDLGKAYELFCDIPEK----NAVSYATMITGFVRAGRFD 161
Query: 358 GVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLV---EKGYCPHAHALD 414
LY + + F + V+L Y L WN V + +
Sbjct: 162 EAEFLYAETPVK-FRDSVASNVLLSGY--------LRAGKWNEAVRVFQGMAVKEVVSCS 212
Query: 415 LLITGLCSRGQVHEAFECSKQMLER 439
++ G C G++ +A +M ER
Sbjct: 213 SMVHGYCKMGRIVDARSLFDRMTER 237
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 238 YNIRIDTYCKKGR-------FGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGK-- 288
Y++ +DTY K R + ++L E M F P+I+ + L+ N
Sbjct: 294 YDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDL 353
Query: 289 ARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFL 348
++ + S + VY+ + +L + A + M E D +TY +
Sbjct: 354 VFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVF 413
Query: 349 GLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGYCP 408
GL ++ +E + +M + P +T +L++ C+N LD +L+ + ++EKG+
Sbjct: 414 GLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDI 473
Query: 409 HAHALDLLITGLCSRGQVHEAFE 431
++ LD+LI G +H FE
Sbjct: 474 DSNLLDVLIDGFV----IHNKFE 492
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 190 GKMVSRFSPDTKSMNILLLG-FKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKK 248
GK +S+ D ++ +G F E+ ++T M G+ PDN+TY+ + CK
Sbjct: 365 GKSLSKAVYDGIHRSLTSVGRFDEAEEITKA------MRNAGYEPDNITYSQLVFGLCKA 418
Query: 249 GRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVY 308
R + +L++ME + P I+T T LI G KA F + + +D+ +
Sbjct: 419 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 478
Query: 309 NALITALLRSKDIESALSLMDEMIEK-RVELDGVTYHTMFLGLMRSTGIEGVSELYQKMA 367
+ LI + E A + EM++ V+ TY + L++ E +L Q M
Sbjct: 479 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 538
Query: 368 QRNF 371
++N+
Sbjct: 539 KQNY 542
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 127/324 (39%), Gaps = 15/324 (4%)
Query: 160 VGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVS-RFSPDTKSMNILL--LGFKESGDV 216
G + D + + + F R M E ++ M+ F P + ++LL L + D+
Sbjct: 292 AGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDL 351
Query: 217 TSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTL 276
V + G S Y+ + GRF + + + M + P T + L
Sbjct: 352 DLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQL 411
Query: 277 IHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRV 336
+ G + +AR + +++ ++ D + LI ++ +++ AL+ M+EK
Sbjct: 412 VFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGF 471
Query: 337 ELDGVTYHTMFLGLMRSTGIEGVSELYQKMAQR-NFVPQTRTVVMLMKYFCQNFRLDLSL 395
++D + G + EG S +M + N P T +L+ + + + +L
Sbjct: 472 DIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEAL 531
Query: 396 SLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFL 455
L + ++ Y +A A D L G + +A + + + AA F ++E F
Sbjct: 532 DLLQMMKKQNYPAYAEAFD---GYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFY 588
Query: 456 LQSGDIDKLKELDQMIKNLLSVLP 479
+ D KNLL + P
Sbjct: 589 REGRLTDA--------KNLLFICP 604
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 58/296 (19%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFS--PDTKSMNILLLGFKESGDVTSVELFYHEMV 227
N L++A Q +A VF +M RF D + LL + V++ ++ +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEM-QRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFG--DGLRLLEEMERRKFVPTIETITTLIHGAGIVQN 285
K G S D N ID Y + G G D ++L E+M R
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER--------------------- 183
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
DT +N+++ L+++ ++ A L DEM ++ D ++++T
Sbjct: 184 ------------------DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNT 221
Query: 346 MFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKG 405
M G R + EL++KM +RN V + M+M Y D+ ++ + +K
Sbjct: 222 MLDGYARCREMSKAFELFEKMPERNTVSWS---TMVMGYSKAG---DMEMA--RVMFDKM 273
Query: 406 YCPHAHAL--DLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQSG 459
P + + ++I G +G + EA QM+ G AA+ + + +SG
Sbjct: 274 PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 14/241 (5%)
Query: 143 SFEDTLDGFRRMEE-----DVFVGR-EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRF 196
S+ LDG+ R E ++F E T ++ ++ + M+ AR +F KM
Sbjct: 218 SWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKM-PLP 276
Query: 197 SPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYC-KKGRFGDGL 255
+ + + I++ G+ E G + + +MV G D I I C + G G+
Sbjct: 277 AKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV-ISILAACTESGLLSLGM 335
Query: 256 RLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITAL 315
R+ ++R + L+ N KA +FN+IP ++LV +N ++ L
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV----SWNTMLHGL 391
Query: 316 LRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGI-EGVSELYQKMAQRNFVPQ 374
+ A+ L M + + D VT+ + + I EG+ Y + VPQ
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQ 451
Query: 375 T 375
Sbjct: 452 V 452
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 16/285 (5%)
Query: 126 ITLKAMSIMLSKIAKYQS---FEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQM 182
ITL+ + S IA Y E+ L F RM E+ +G E+ + L+ A +
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEY---TYGTLIMACTKLSAL 258
Query: 183 KEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIR 241
+ + G +V S + + LL + + GD+++ ++E D V +
Sbjct: 259 HQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH----VDLVMWTAM 314
Query: 242 IDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNL 301
I Y G + L L ++M+ + P TI +++ G G+++N R + + + +
Sbjct: 315 IVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV-HGLSIKVG 373
Query: 302 VVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSE 361
+ DT V NAL+ + A + E E D V ++++ G ++ I
Sbjct: 374 IWDTNVANALVHMYAKCYQNRDA----KYVFEMESEKDIVAWNSIISGFSQNGSIHEALF 429
Query: 362 LYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
L+ +M + P TV L L + SL Y V+ G+
Sbjct: 430 LFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 14/226 (6%)
Query: 108 FDKAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTD 167
+ AW + + T + +M+++L +A+ S E+ + F RM + G E +
Sbjct: 307 IEDAWTIFESTTE-----VDEVSMTVILVGLAQNGSEEEAIQFFIRMLQ---AGVEIDAN 358
Query: 168 EFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLLGFKESGDVTSVELFYHEM 226
+ +L + + + ++ R FS +T N L+ + + GD+T + + M
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRM 418
Query: 227 VKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNA 286
KR + V++N I + + G L+L EEM + PT T +L+H V
Sbjct: 419 PKRNY----VSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLI 474
Query: 287 GKARQLFNEIPS-RNLVVDTGVYNALITALLRSKDIESALSLMDEM 331
K R+L NE+ + T Y +I L R+ ++ A S +D +
Sbjct: 475 DKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSL 520
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVK 228
+N ++ + M EARS+F +M R D S N +L G+ GD+ + E + +M +
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCR---DVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 229 RGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM-ERRKFVPTIETITTLIHGAGIVQ--N 285
R ++N I Y + GR + L + M + VP T+T ++ + +
Sbjct: 150 RNV----FSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 286 AGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHT 345
GK + E N VD V NALI + IE A+ + + I++R D ++++T
Sbjct: 206 FGKWVHKYGETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVF-KGIKRR---DLISWNT 260
Query: 346 MFLGL-MRSTGIEGVSELYQKMAQRNFVPQTRTVV 379
M GL G E ++ L+ +M P T V
Sbjct: 261 MINGLAAHGHGTEALN-LFHEMKNSGISPDKVTFV 294
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 146/362 (40%), Gaps = 25/362 (6%)
Query: 53 ISTSLVENVLGRLFASHSNGL---KALEFFNFTLHHSQSPPSHVSFEMTLHILTRMRYFD 109
+S S N++ ++ S N + L FF+++ S F L +L +
Sbjct: 61 VSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHT 120
Query: 110 KAWMLLQETARTHPSLITLKAMSIMLSKIAKYQSFEDTLDGFRRMEEDVFVGREFGTDEF 169
+LL + R + + SI+ + K ED + F+ + D F + D F
Sbjct: 121 AMQILLSDL-RKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKIL--DKFSCPQ---DGF 174
Query: 170 NV--LLKAFCSQRQMKEARSVFGKMVSRFSPDTKSM-NILLLGFKESGDVTSVELFYHEM 226
V ++ A CS+ +K A V S + S+ LL G+ +V +M
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDM 234
Query: 227 VKRGFSPDNVTYNIRIDTYCKK-------GRFGDGLRLLEEMERRKFVPTIETITTLIHG 279
G +PD +N + C++ G + L ++ EM K PT + L+
Sbjct: 235 KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSC 294
Query: 280 AGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELD 339
G + ++ Q+ ++ DTG Y ++ L + ++DEMIE+ +
Sbjct: 295 LGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPE 354
Query: 340 GVTYHTMFLGLMRSTGIEGVS---ELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLS 396
Y+ + +G++ G+E V+ +L++KM + + + +L+ C+ +
Sbjct: 355 RKFYYDL-IGVL--CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRE 411
Query: 397 LW 398
LW
Sbjct: 412 LW 413
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 89/224 (39%), Gaps = 10/224 (4%)
Query: 150 GFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSR-FSPDTKSMNILLL 208
G +DV G E + LL + QR +KEAR V M S +PD N LL
Sbjct: 194 GVMHHHKDVISGNELSV--YRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 209 GFKE-------SGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEM 261
E SG V EM P +++YNI + + R + ++LE+M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQM 311
Query: 262 ERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDI 321
+R P + ++ + GK Q+ +E+ R + Y LI L + +
Sbjct: 312 KRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERV 371
Query: 322 ESALSLMDEMIEKRVELDGVTYHTMFLGLMRSTGIEGVSELYQK 365
AL L ++M V G Y + L + E EL+++
Sbjct: 372 NFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 8/178 (4%)
Query: 169 FNVLLKAFCSQRQMK-------EARSVFGKMVS-RFSPDTKSMNILLLGFKESGDVTSVE 220
FN LL C + + EA ++ +M S + P + S NILL + V
Sbjct: 246 FNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESC 305
Query: 221 LFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGA 280
+M + G PD +Y + GRFG G ++++EM R F P + LI
Sbjct: 306 QILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVL 365
Query: 281 GIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVEL 338
V+ A QLF ++ ++ VY+ LI L + + E L +E + V L
Sbjct: 366 CGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTL 423
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 114/267 (42%), Gaps = 24/267 (8%)
Query: 234 DNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKARQLF 293
D T I C +G L ++ + + +L+ G + +N +AR++
Sbjct: 172 DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 231
Query: 294 NEIPSRNLVVDTGVYNALITALLR-------SKDIESALSLMDEMIEKRVELDGVTYHTM 346
++ S + D +N+L+T L S + AL++M EM +++ ++Y+ +
Sbjct: 232 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 347 FLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNYLVEKGY 406
L R+ + ++ ++M + P T + +++ R + + ++E+G+
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 407 CPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASF-----LMLERFLLQSGDI 461
P LI LC +V+ A Q+ E+ + S + L++ + L + G+
Sbjct: 352 RPERKFYYDLIGVLCGVERVNFAL----QLFEKMKRSSVGGYGQVYDLLIPK-LCKGGNF 406
Query: 462 DKLKEL-------DQMIKNLLSVLPPS 481
+K +EL D + +S+L PS
Sbjct: 407 EKGRELWEEALSIDVTLSCSISLLDPS 433
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 28/278 (10%)
Query: 94 SFEMTLHILTRMRYFDKAWMLLQETAR--THPSLITLKAMSIMLSKIAKYQSFEDTLDGF 151
S+ + + RM+ ++++ LL E R P+ +TL ++LS +K + D
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTL---LLVLSACSKVKD----KDLC 255
Query: 152 RRMEEDVFVGREFGTDEF----NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILL 207
+R+ E V E T+ N L+ A+ + +M A +F M +R D S ++
Sbjct: 256 KRVHEYV---SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR---DVISWTSIV 309
Query: 208 LGFKESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFV 267
G+ E G++ ++ +M R D +++ I ID Y + G F + L + EM+ +
Sbjct: 310 KGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI 365
Query: 268 PTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSL 327
P T+ +++ + + + I + D V NALI + E A +
Sbjct: 366 PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKV 425
Query: 328 MDEMIEKRVELDGVTYHTMFLGLMRS-TGIEGVSELYQ 364
+M ++ D T+ M +GL + G E + +Q
Sbjct: 426 FHDMDQR----DKFTWTAMVVGLANNGQGQEAIKVFFQ 459
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 142 QSFEDTLDGFRRMEEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDT 200
+ FE LD F M + V +N+++ +++ S+F +M+ S F PD
Sbjct: 152 EQFEAALDVFVEMPKRVAFA-------WNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 201 KSMNILLLGFK-ESGDVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLE 259
+ + L+ +S +V + + M+K G+S N + Y K G D +R LE
Sbjct: 205 YTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELE 264
Query: 260 EMERRKFVPTIETITTLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSK 319
+E V T + ++I + KA ++F+ P +N+V + +IT R+
Sbjct: 265 SIE----VLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV----TWTTMITGYGRNG 316
Query: 320 DIESALSLMDEMIEKRVELDGVTY 343
D E AL EM++ V+ D Y
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAY 340
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 31/321 (9%)
Query: 169 FNVLLKAFCSQRQMKEARSVFGKMV-SRFSPDTKSMNILLLGFKESGDVTSVELFYHEMV 227
FN+L++ F + + +A + +M+ SR PD + L+ E V E + ++V
Sbjct: 85 FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIV 144
Query: 228 KRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHG---AGIVQ 284
+ GF D N + Y G R+ +M R V + T+++ G G+V+
Sbjct: 145 RFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV----SWTSMVAGYCKCGMVE 200
Query: 285 NAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYH 344
N AR++F+E+P RNL ++ +I ++ E A+ L + M + V V
Sbjct: 201 N---AREMFDEMPHRNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGV----VANE 249
Query: 345 TMFLGLMRSTGIEGVSEL----YQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
T+ + ++ S G E Y+ + + + L+ F + ++ ++ ++
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 401 LVEKGYCPHAHALDL--LITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLERFLLQS 458
L P +L +I GL G H+A QM+ G +F +
Sbjct: 310 L------PETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 459 GDIDKLKELDQMIKNLLSVLP 479
G ++K E+ + +K + P
Sbjct: 364 GLVEKGLEIYENMKKDHGIEP 384
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 129/345 (37%), Gaps = 45/345 (13%)
Query: 170 NVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSVELFYHEMVKR 229
N L+ + + + A +FG+M R D S ++ G+ + G V + + EM R
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFR---DVVSWTSMVAGYCKCGMVENAREMFDEMPHR 212
Query: 230 GFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAGIVQNAGKA 289
T++I I+ Y K F + L E M+R V + ++I +
Sbjct: 213 NL----FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268
Query: 290 RQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDGVTYHTMFLG 349
+ + + ++ V+ + AL+ R DIE A+ + E E D +++ ++ G
Sbjct: 269 ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI----HVFEGLPETDSLSWSSIIKG 324
Query: 350 LMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLW----------- 398
L + +M F+P+ T ++ ++ L ++
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEP 384
Query: 399 ----------------------NYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQM 436
N++++ P+A L L+ G C + E E M
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL-GACKIYKNTEVAERVGNM 443
Query: 437 LERGRHMSAASFLMLERFLLQSGDIDKLKELDQMIKNLLSVLPPS 481
L + + + +++L +G DK++ L M+K L PP
Sbjct: 444 LIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 117/278 (42%), Gaps = 22/278 (7%)
Query: 163 EFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESGDVTSV-EL 221
E T +N++L + ++A+S F +M + D S N ++ G+ G++ EL
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK---DAASWNTMITGYARRGEMEKAREL 177
Query: 222 FYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETITTLIHGAG 281
FY M K + V++N I Y + G + R V T +I G
Sbjct: 178 FYSMMEK-----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWTAMITGYM 228
Query: 282 IVQNAGKARQLFNEIP-SRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEKRVELDG 340
+ A +F ++ ++NLV +NA+I+ + + E L L M+E+ + +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVT----WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 341 VTYHTMFLGLMRSTGIEGVSELYQKMAQRNFVPQTRTVVMLMKYFCQNFRLDLSLSLWNY 400
+ LG + ++ +++Q +++ + L+ +C+ L + L+
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344
Query: 401 LVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLE 438
+ +K A + +I+G G +A ++M++
Sbjct: 345 MKKKDVV----AWNAMISGYAQHGNADKALCLFREMID 378
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/314 (17%), Positives = 131/314 (41%), Gaps = 20/314 (6%)
Query: 155 EEDVFVGREFGTDEFNVLLKAFCSQRQMKEARSVFGKMVSRFSPDTKSMNILLLGFKESG 214
++ ++VG + L+ +C + + A++VF +M + + S +++G+ ++G
Sbjct: 302 QDHIYVG--------SALIDMYCKCKCLHYAKTVFDRMKQK---NVVSWTAMVVGYGQTG 350
Query: 215 DVTSVELFYHEMVKRGFSPDNVTYNIRIDTYCKKGRFGDGLRLLEEMERRKFVPTIETIT 274
+ +M + G PD+ T I +G + + + +
Sbjct: 351 RAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSN 410
Query: 275 TLIHGAGIVQNAGKARQLFNEIPSRNLVVDTGVYNALITALLRSKDIESALSLMDEMIEK 334
+L+ G + + +LFNE+ R+ V + A+++A + + L D+M++
Sbjct: 411 SLVTLYGKCGDIDDSTRLFNEMNVRDAVS----WTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 335 RVELDGVTYHTMFLGLMRSTGIEGVSELYQKM-AQRNFVPQTRTVVMLMKYFCQNFRLDL 393
++ DGVT + R+ +E ++ M ++ VP ++ F ++ RL+
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 394 SLSLWNYLVEKGYCPHAHALDLLITGLCSRGQVHEAFECSKQMLERGRHMSAASFLMLER 453
++ N + + P A L++ ++G + ++ ++E H A + +L
Sbjct: 527 AMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPH-HPAGYTLLSS 582
Query: 454 FLLQSGDIDKLKEL 467
G D + +L
Sbjct: 583 IYASKGKWDSVAQL 596