Miyakogusa Predicted Gene

Lj1g3v2942100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2942100.1 gi|36957169|gb|AY316737.1|.path1.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion ...   430   e-121
AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3...   399   e-111
AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion ...   399   e-111
AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion ...   285   2e-77
AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2...   271   3e-73
AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion ...   259   1e-69
AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion ...   177   8e-45
AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5...    94   1e-19
AT5G37610.1 | Symbols:  | Eukaryotic porin family protein | chr5...    92   3e-19

>AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion
           channel 1 | chr3:85754-87612 FORWARD LENGTH=276
          Length = 276

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/276 (74%), Positives = 246/276 (89%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M KGPGLYT+IGKKARDLL+KD++SDQKF+ITTFSP GVAITS+GTKKG+L + DV  Q 
Sbjct: 1   MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           + KNITTD+KV TDS    T  V++ APGL++IFSFKVPDQ SGKVELQYLH+YAGIS+S
Sbjct: 61  RRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTS 120

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
           +GLT NP VNFSGVIG+NVLA+G D++FDTK G  TK NAGLSFTK+DLIA+LT+NDKGD
Sbjct: 121 MGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGD 180

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
            LNASYYH+V+PL NTAVGAEV+H+ S+ ++T+T+GTQH+LDPLT++KARVN+ G ASAL
Sbjct: 181 LLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASAL 240

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           IQHEW+PKSFFTISGEVDTK+I+KSAKVGLALALKP
Sbjct: 241 IQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALKP 276


>AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3 |
           chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/276 (68%), Positives = 230/276 (83%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M KGPGLYT+IGKKARDLL++DY  DQKF++TT+S TGVAIT++GT KG LF+ DV TQ+
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           KN N T D+KV TDS+L TT+  ++PAPGLK I   K+PD +SGK E+QY HDYAGIS+S
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
           +G TA PIVNFSGV+GTN L+LG D+ ++T+ G     NAG +FTKDDL A+L LNDKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
            LNASYY +VSP  +T VGAE++H F+T EN +T+GTQHALDPLTT+KARVNN G A+AL
Sbjct: 181 KLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           IQHEWRPKSFFT+SGEVD+KAI+KSAKVG+ALALKP
Sbjct: 239 IQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274


>AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion
           channel 3 | chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  399 bits (1025), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 188/276 (68%), Positives = 230/276 (83%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M KGPGLYT+IGKKARDLL++DY  DQKF++TT+S TGVAIT++GT KG LF+ DV TQ+
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           KN N T D+KV TDS+L TT+  ++PAPGLK I   K+PD +SGK E+QY HDYAGIS+S
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
           +G TA PIVNFSGV+GTN L+LG D+ ++T+ G     NAG +FTKDDL A+L LNDKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
            LNASYY +VSP  +T VGAE++H F+T EN +T+GTQHALDPLTT+KARVNN G A+AL
Sbjct: 181 KLNASYYQIVSP--STVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           IQHEWRPKSFFT+SGEVD+KAI+KSAKVG+ALALKP
Sbjct: 239 IQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALALKP 274


>AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion
           channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276
          Length = 276

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/276 (50%), Positives = 195/276 (70%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M+KGPGL+TDIGKKA+DLL +DY+SDQKF+I+T+S +GVA+TS+  KKG +  ADV TQ 
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQY 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           K KN   D+K+DTDS++ TT+ + +  P  KAI SFKVPD  S K+E+QY HD+A ++++
Sbjct: 61  KYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAA 120

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
             L  NP+++ +  +G+ V++ GA+  +DT     TK NAG+S TK D   ++ L DKGD
Sbjct: 121 AALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGD 180

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
           +L ASY H       TA   EV  +FSTNENT+T+G  +A+D  T +KA++NN G   AL
Sbjct: 181 SLKASYLHHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGAL 240

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           +QHE  P+S  T+S E+DTKA+EK  + GL+LALKP
Sbjct: 241 LQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLALKP 276


>AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2 |
           chr5:26935223-26937123 FORWARD LENGTH=303
          Length = 303

 Score =  271 bits (693), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 140/303 (46%), Positives = 195/303 (64%), Gaps = 27/303 (8%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGV--------------------- 39
           M+KGPGL+TDIGKKA+DLL +DY+SDQKF+I+T+S +GV                     
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVGTERENEYQDDIYFCLRTRCL 60

Query: 40  ------AITSSGTKKGELFVADVNTQLKNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAI 93
                 A+TS+  KKG +  ADV TQ K KN   D+K+DTDS++ TT+ + +  P  KAI
Sbjct: 61  IMSENEALTSTALKKGGVHAADVATQYKYKNALFDVKIDTDSSVLTTVTLTEILPSTKAI 120

Query: 94  FSFKVPDQRSGKVELQYLHDYAGISSSIGLTANPIVNFSGVIGTNVLALGADLTFDTKIG 153
            SFKVPD  S K+E+QY HD+A ++++  L  NP+++ +  +G+ V++ GA+  +DT   
Sbjct: 121 ASFKVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSK 180

Query: 154 ELTKSNAGLSFTKDDLIAALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTL 213
             TK NAG+S TK D   ++ L DKGD+L ASY H       TA   EV  +FSTNENT+
Sbjct: 181 TFTKYNAGISVTKPDACLSIILGDKGDSLKASYLHHFDEFKRTAAVGEVYRKFSTNENTI 240

Query: 214 TLGTQHALDPLTTLKARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALA 273
           T+G  +A+D  T +KA++NN G   AL+QHE  P+S  T+S E+DTKA+EK  + GL+LA
Sbjct: 241 TVGGLYAIDHSTAVKAKLNNHGTLGALLQHEVLPRSLVTVSSEIDTKALEKHPRFGLSLA 300

Query: 274 LKP 276
           LKP
Sbjct: 301 LKP 303


>AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion
           channel 4 | chr5:23283895-23285335 REVERSE LENGTH=274
          Length = 274

 Score =  259 bits (663), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 126/276 (45%), Positives = 181/276 (65%), Gaps = 2/276 (0%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M   P  + DIGKKA+DLL KDY  D KFT+T  S TG    ++G KK + F  D++T  
Sbjct: 1   MGSSPAPFADIGKKAKDLLNKDYIFDHKFTLTMLSATGTEFVATGLKKDDFFFGDISTLY 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           K +N   D+K+D+ S++ T + + +  P  KA+ SFK+PD +SGK+++QY+H +A ++SS
Sbjct: 61  KGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHKSGKLDVQYVHPHATLNSS 120

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
           IGL   P+++ S  IG+  + LG +++FDT    LTK NAG+ F    + AAL L DKG+
Sbjct: 121 IGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGE 180

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
           +L A+Y H V+P   T+ GAE+  RFS   N+ T+G+ H++D  T +K R +N GKA  +
Sbjct: 181 SLRATYVHTVNP--TTSFGAELIRRFSNYNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMV 238

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           +Q EWRPKS  T S E D+KA+  S K+GLALALKP
Sbjct: 239 VQREWRPKSHITFSAEYDSKAVTSSPKLGLALALKP 274


>AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion
           channel 5 | chr3:18505836-18507699 REVERSE LENGTH=226
          Length = 226

 Score =  177 bits (448), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 112/276 (40%), Positives = 154/276 (55%), Gaps = 50/276 (18%)

Query: 1   MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
           M+KGPGL+ DIGK A+DLL +DY +DQKF+I+T S +GVA+TS+  K G L  A+V TQ 
Sbjct: 1   MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61  KNKNITTDIKVDTDSNLFTTIAVNDPAPGLKAIFSFKVPDQRSGKVELQYLHDYAGISSS 120
           K +N   D+K+DTD N+                                          S
Sbjct: 61  KYRNTFFDVKIDTDFNV-----------------------------------------KS 79

Query: 121 IGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLIAALTLNDKGD 180
           +    N  V+    I  N L  G D T  T     TK N G+S TK D   ++ L DKGD
Sbjct: 80  LVYPMNKFVS----IDHNTLT-GYDTTSRT----FTKYNVGVSVTKPDQCVSIILGDKGD 130

Query: 181 ALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHALDPLTTLKARVNNFGKASAL 240
           ++ ASY + +   T +A   EV  + STNE T+T+G  +A+D LT +KA++N+ GK  AL
Sbjct: 131 SIKASYVYYLDESTRSATVGEVIRKISTNETTVTVGGLYAVDHLTNVKAKLNSNGKFGAL 190

Query: 241 IQHEWRPKSFFTISGEVDTKAIEKSAKVGLALALKP 276
           +QHE  PKS  TISGE+DTK ++K  ++GL+L+LKP
Sbjct: 191 LQHEGLPKSIVTISGEIDTKTLDKYPRLGLSLSLKP 226


>AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5
          | chr3:18506364-18507699 REVERSE LENGTH=127
          Length = 127

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 61/81 (75%)

Query: 1  MAKGPGLYTDIGKKARDLLFKDYHSDQKFTITTFSPTGVAITSSGTKKGELFVADVNTQL 60
          M+KGPGL+ DIGK A+DLL +DY +DQKF+I+T S +GVA+TS+  K G L  A+V TQ 
Sbjct: 1  MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61 KNKNITTDIKVDTDSNLFTTI 81
          K +N   D+K+DTD N+ TTI
Sbjct: 61 KYRNTFFDVKIDTDFNILTTI 81


>AT5G37610.1 | Symbols:  | Eukaryotic porin family protein |
           chr5:14938121-14938612 FORWARD LENGTH=163
          Length = 163

 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 111 LHDYAGISSSIGLTANPIVNFSGVIGTNVLALGADLTFDTKIGELTKSNAGLSFTKDDLI 170
           L + A IS+ +GL ANPI++FS V G +    G +LT D     +TK+N  LS   +D  
Sbjct: 2   LSERARISTIVGLFANPILSFSAVFGNDFWRFGFELTLDLVNRIITKANTVLSLITEDTT 61

Query: 171 AALTLNDKGDALNASYYHVVSPLTNTAVGAEVTHRFSTNENTLTLGTQHAL--DPLTTLK 228
              +++ K     ASYY  +   + T  GAE  +  S   N+ ++G +H    D L    
Sbjct: 62  TTFSIDKKASLFTASYYQRLH--SKTVCGAEAKYILSDKSNSFSIGKRHLFGDDDLIQAL 119

Query: 229 ARVNNFGKASALIQHEWRPKSFFTISGEVDTKAIEKSAKVGLALAL 274
             V+N G    L QH W  KSFFTI+GE        S + GLA+ L
Sbjct: 120 LSVSNGGSMRVLFQHHWTLKSFFTIAGERLLN--HSSQRFGLAVEL 163