Miyakogusa Predicted Gene
- Lj1g3v2927340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2927340.1 Non Chatacterized Hit- tr|I1N480|I1N480_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38643
PE,74.8,0,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,P,CUFF.29701.1
(612 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 608 e-174
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 355 5e-98
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 355 5e-98
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 345 6e-95
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 339 3e-93
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 337 2e-92
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 335 7e-92
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 8e-89
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 3e-87
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 317 1e-86
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 317 1e-86
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 315 7e-86
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 8e-86
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 311 6e-85
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 5e-84
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 1e-83
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 2e-83
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 305 8e-83
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 298 9e-81
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 297 1e-80
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 296 2e-80
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 296 3e-80
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 296 4e-80
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 294 1e-79
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 293 2e-79
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 290 3e-78
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 288 7e-78
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 287 2e-77
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 282 6e-76
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 5e-75
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 277 2e-74
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 276 4e-74
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 5e-73
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 268 7e-72
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 267 1e-71
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 5e-71
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 264 2e-70
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 5e-70
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 9e-70
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 9e-68
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 254 1e-67
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 253 3e-67
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 6e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 248 9e-66
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 1e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 243 2e-64
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 4e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 7e-64
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 3e-63
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 5e-63
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 2e-61
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 233 3e-61
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 232 7e-61
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 231 8e-61
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 3e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 5e-59
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 222 5e-58
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 221 2e-57
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 217 2e-56
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 217 2e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 6e-56
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 9e-56
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 6e-54
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 1e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 6e-53
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 7e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 8e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 9e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 187 2e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 9e-46
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 8e-44
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 6e-32
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 2e-28
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 118 1e-26
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 2e-26
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 6e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 113 4e-25
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 5e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 7e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 6e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 6e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 105 7e-23
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 105 1e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 6e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 96 8e-20
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 5e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 93 5e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 89 1e-17
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 87 4e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 81 2e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 70 3e-12
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 3e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 70 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 69 1e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 67 3e-11
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 67 5e-11
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 1e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 2e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 3e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 4e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 608 bits (1568), Expect = e-174, Method: Compositional matrix adjust.
Identities = 295/572 (51%), Positives = 399/572 (69%), Gaps = 24/572 (4%)
Query: 41 MLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE-FLCNSMI 99
MLR++++ N+ + KF+ AS AV I +AR+ FD +RD+ FL NSMI
Sbjct: 1 MLRHAIETNVQIFTKFLVISAS----------AVGI-GYARKLFDQRPQRDDSFLSNSMI 49
Query: 100 TTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVH 159
+ RQ+ + F L+RDL + T F P TFT L K C+ M +GL++H
Sbjct: 50 KAYLETRQYPDSFALYRDLRKETC--------FAPDNFTFTTLTKSCSLSMCVYQGLQLH 101
Query: 160 GVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMS 219
+ GFC D+YV+T +VDMY KFG +G AR FDEM RS VSWTA+I GY RCG++
Sbjct: 102 SQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELD 161
Query: 220 EARKLFDVMPE-RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
A KLFD MP +DV +N M+DG+VK G M A+ LFD+M K VI+WT+M+ GYC
Sbjct: 162 LASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIK 221
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
D+++AR +FD MPE+NL +WN MIGG+C+NKQP E ++LF+EM + S++P++VT+LSVL
Sbjct: 222 DIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVL 281
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
PA++D GAL LG W F +RKKLD V+V TA++DMY+KCGEI +A+ +F+EMPEK+ A
Sbjct: 282 PAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVA 341
Query: 399 SWNALINGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SWNA+I+G+A+NG A+ AL++F MMI E +P+EITM+ V++ACNH GLV+EGR+ F
Sbjct: 342 SWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 458 MEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR 517
M G+ +IEHYGCMVDLLGRAG L EAE+LI MPF+ NGIILSSFL ACG +KD+ R
Sbjct: 400 MREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIER 459
Query: 518 AERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDG 577
AER+L++ V++E + G+YVLLRNLYA +KRW D VK++M+ + KEV CS+IE++
Sbjct: 460 AERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINY 519
Query: 578 RFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
EF++GD H + I L LG L HM E
Sbjct: 520 IVSEFISGDTTHPHRRSIHLVLGDLLMHMNEE 551
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/592 (36%), Positives = 332/592 (56%), Gaps = 29/592 (4%)
Query: 16 ERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVS 75
E + DL +C + + + Q+HA ++R ++ +L++ K I+ A+S R+
Sbjct: 20 EERLQDLPKCAN---LNQVKQLHAQIIRRNLHEDLHIAPKLIS-----ALSLCRQTNL-- 69
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
A R F+ + + LCNS+I H Q + F +F ++ R PF
Sbjct: 70 ----AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPF--- 122
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLG--SARKV 193
L+K C+ +H K G D+YV AL+D Y + G LG A K+
Sbjct: 123 ------LLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKL 176
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
F++MSER VSW +++ G + G++ +AR+LFD MP+RD+ ++N M+DGY + M A
Sbjct: 177 FEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAF 236
Query: 254 DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMP--EKNLFTWNAMIGGHCKNKQP 311
+LF+KM ++N +SW++MV GY + GD+E AR+MFD MP KN+ TW +I G+ +
Sbjct: 237 ELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLL 296
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
EA +L +M+ S ++ + ++S+L A + G L LG I +R L + V A
Sbjct: 297 KEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNA 355
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
L+DMYAKCG + +A +F ++P+K+ SWN +++G V+G KEA+E+F M REG RP+
Sbjct: 356 LLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
++T I VL +CNH GL+DEG F +ME + + PQ+EHYGC+VDLLGR G L EA ++
Sbjct: 416 KVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVV 475
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
QTMP + N +I + L AC +V A+ VL VK++ G+Y LL N+YA + W
Sbjct: 476 QTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWE 535
Query: 551 DVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
V D++ MK G K S +E++ EF D H + I LG L
Sbjct: 536 GVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 204/596 (34%), Positives = 319/596 (53%), Gaps = 54/596 (9%)
Query: 27 SKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVR---HARRF 83
S KT + QIH +++ + N NL TT +A ++SRR R H
Sbjct: 21 SCKTSDDVNQIHGRLIKTGIIKNSNL-----TTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 84 --FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
F D FL N++I +H + + L +++ F + +
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCL----MLENGVSVDKF-----SLSL 126
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++K C+ + G+++HG K G DL++ L+ +Y+K G LG +R++FD M +R
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDV---------------------------------- 227
VS+ ++I GY +CG + AR+LFD+
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 228 MPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMF 287
MPE+D+ ++N MIDGYVK G ++ A+ LFD M ++V++W +M+ GY + G V A+ +F
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
D MP +++ +N+M+ G+ +NK EAL++F +M + + P++ TL+ VLPA+A LG L
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 348 DLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGF 407
+ + K+ ++ ALIDMY+KCG I A L+FE + K WNA+I G
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQ 466
A++G + A ++ + R +P++IT +GVL+AC+H GLV EG CF+ M I P+
Sbjct: 427 AIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPR 486
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETV 526
++HYGCMVD+L R+G ++ A+NLI+ MP + N +I +FL AC H K+ E V + +
Sbjct: 487 LQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI 546
Query: 527 KMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREF 582
YVLL N+YA+ W DV V+ MMK R K CS IE+DGR EF
Sbjct: 547 LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 217/604 (35%), Positives = 324/604 (53%), Gaps = 62/604 (10%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
KT+ +L IHA M++ + N L+K I C S E + +A F
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI-----LSPHFEGLP---YAISVFKTIQ 95
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFR-DLCRGTATRTMTMTPFKPGGHTFTALVKGCT 147
+ + + N+M H A+ S+P + + +C M P +TF ++K C
Sbjct: 96 EPNLLIWNTMFRGH-ALS--SDPVSALKLYVC-------MISLGLLPNSYTFPFVLKSCA 145
Query: 148 ACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTA 207
A +EG ++HG +K G LDLYV T+L+ MYV+ G L A KVFD+ R VS+TA
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 208 VIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS- 266
+I GY G + A+KLFD +P +DV ++N MI GY + G A +LF M NV
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 267 -------------------------W-------------TSMVSGYCQNGDVESARLMFD 288
W +++ Y + G++E+A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
+P K++ +WN +IGG+ EAL LF+EML S PN+VT+LS+LPA A LGA+D
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAID 384
Query: 349 LGGWIQGF--ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALING 406
+G WI + R K + + + T+LIDMYAKCG+I A +F + K +SWNA+I G
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAP 465
FA++GRA + ++F M + G +P++IT +G+LSAC+H G++D GR F+ M + + + P
Sbjct: 445 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 504
Query: 466 QIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRET 525
++EHYGCM+DLLG +G EAE +I M + +G+I S L AC +V E
Sbjct: 505 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 564
Query: 526 VKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
+K+E E G YVLL N+YA+ RW +V + ++ +G K CS IE+D EF+ G
Sbjct: 565 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Query: 586 DYLH 589
D H
Sbjct: 625 DKFH 628
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 198/403 (49%), Gaps = 52/403 (12%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYV---KFGVLGSARKV 193
H +L+ C + R +H +K G Y + L++ + F L A V
Sbjct: 34 HPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLF------DVMP------------------ 229
F + E + + W + G+ D A KL+ ++P
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 230 ---------------ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGY 274
+ D+ +I YV+ G ++ A +FDK ++V+S+T+++ GY
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 275 CQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
G +E+A+ +FD +P K++ +WNAMI G+ + EAL+LF++M M +V P+E T+
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTM 269
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE 394
++V+ A A G+++LG + + ++++ ALID+Y+KCGE+ A LFE +P
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 395 KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRC 454
K+ SWN LI G+ KEAL +F+ M+R G PN++TM+ +L AC H G +D GR
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 455 F----KAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
K ++G A + ++D+ + G ++ A + ++
Sbjct: 390 HVYIDKRLKGVTNASSLR--TSLIDMYAKCGDIEAAHQVFNSI 430
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 215/656 (32%), Positives = 327/656 (49%), Gaps = 87/656 (13%)
Query: 26 KSKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARR 82
KSK + + +HA ++++ N + N L + C S+ R+
Sbjct: 31 KSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSL--------------EDGRQ 76
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFR-----DLCRGTATRT----------- 126
FD +R+ + NS++T + E +LFR D C + +
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 127 ------MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDM 180
M F ++F +++ C+ +G++VH + K+ F D+Y+ +ALVDM
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 181 YVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE---------- 230
Y K G + A++VFDEM +R+ VSW ++I + + G EA +F +M E
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 231 ------------------------------RDVAAFNVMIDGYVKLGCMDMAQDLFDKMR 260
D+ N +D Y K + A+ +FD M
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 261 DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFRE 320
+NVI+ TSM+SGY ++ARLMF M E+N+ +WNA+I G+ +N + EAL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC- 375
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ------GFARRKKLDGSVRVSTALID 374
+L SV P + ++L A ADL L LG GF + + + V +LID
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
MY KCG + L+F +M E++ SWNA+I GFA NG EALE+F M+ G +P+ IT
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 435 MIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
MIGVLSAC H G V+EGR F +M FG+AP +HY CMVDLLGRAG L+EA+++I+ M
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 494 PFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVE 553
P + +I S L AC ++++ + V + +++E +G YVLL N+YA +W DV
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 554 DVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
+V+ M+ G K+ CS I++ G F+ D H + I L L M+ E
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPE 671
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 296/546 (54%), Gaps = 52/546 (9%)
Query: 111 PFTLFRDLCRGTATRTMTMTPFKPGGH--------TFTALVKGCTACMATREGLEVHGVA 162
PF RDL R + R T+ ++ H +F ++K + A EG+E+HGVA
Sbjct: 81 PF--LRDLSRSSEPRA-TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVA 137
Query: 163 VKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEAR 222
K D +V T +DMY G + AR VFDEMS R V+W +I Y R G + EA
Sbjct: 138 FKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAF 197
Query: 223 KLFD------VMPER---------------------------------DVAAFNVMIDGY 243
KLF+ VMP+ D ++ Y
Sbjct: 198 KLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMY 257
Query: 244 VKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
GCMDMA++ F KM +N+ T+MVSGY + G ++ A+++FD +K+L W MI
Sbjct: 258 AGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMIS 317
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
+ ++ P EAL++F EM S ++P+ V++ SV+ A A+LG LD W+ L+
Sbjct: 318 AYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
+ ++ ALI+MYAKCG + R +FE+MP + SW+++IN +++G A +AL +F M
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGC 482
+E PNE+T +GVL C+H GLV+EG++ F +M + + I P++EHYGCMVDL GRA
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 483 LDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
L EA +I++MP +N +I S + AC ++ + + +++E + G VL+ N+
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 556
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
YA E+RW DV +++ +M+ + +KE S I+ +G+ EF+ GD H I L ++
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 603 WKHMKV 608
+K+
Sbjct: 617 VSKLKL 622
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 51/376 (13%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +AR FD RD N+MI + E F LF + M + P
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE---------MKDSNVMPDE 212
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+V C R ++ ++N +D ++ TALV MY G + AR+ F +
Sbjct: 213 MILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRK 272
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
MS R+ TA++ GY++CG + +A+ +FD ++D+ + MI YV+ A +F
Sbjct: 273 MSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVF 332
Query: 257 DKM----RDKNVISWTSMVSG-----------------------------------YCQN 277
++M +V+S S++S Y +
Sbjct: 333 EEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G +++ R +F+ MP +N+ +W++MI + + +AL LF M +VEPNEVT + V
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM-KQENVEPNEVTFVGV 451
Query: 338 LPAVADLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EK 395
L + G ++ G I + + ++D++ + + A + E MP
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 396 ETASWNALINGFAVNG 411
W +L++ ++G
Sbjct: 512 NVVIWGSLMSACRIHG 527
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 294/533 (55%), Gaps = 49/533 (9%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
K++T + Q HAFML+ + ++ T AS V+ + N V +A +
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHD--------TFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
+ F NS+I + T+FR++ G P P ++FT ++K C A
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLG---------PVFPDKYSFTFVLKACAA 152
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
EG ++HG+ +K+G D++V LV++Y
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVY--------------------------- 185
Query: 209 IVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT 268
R G ARK+ D MP RD ++N ++ Y++ G +D A+ LFD+M ++NV SW
Sbjct: 186 ----GRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWN 241
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
M+SGY G V+ A+ +FD MP +++ +WNAM+ + +E L++F +ML ++ +
Sbjct: 242 FMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL 388
P+ TL+SVL A A LG+L G W+ + + ++ ++TAL+DMY+KCG+I +A +
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
F +++ ++WN++I+ +V+G K+ALE+F M+ EGF+PN IT IGVLSACNH G++
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 449 DEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLF 507
D+ R+ F+ M + + P IEHYGCMVDLLGR G ++EAE L+ +P D I+L S L
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 508 ACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMK 560
AC F + +AER+ +++ + Y + NLYA++ RW V D + M+
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/643 (30%), Positives = 332/643 (51%), Gaps = 60/643 (9%)
Query: 5 SPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIA 64
+P Q T + R + +C S + L Q H M+R ++ +K A +
Sbjct: 20 NPNQPTTNNERSRHISLIERCVS---LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSS 76
Query: 65 VSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTAT 124
++ + +AR+ FD K + F N++I + + F D+
Sbjct: 77 FAS---------LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM------ 121
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
++ + P +TF L+K + G +HG+AVK+ D++VA +L+ Y
Sbjct: 122 --VSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAA--------- 235
G L SA KVF + E+ VSW ++I G+ + G +A +LF M DV A
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 236 ------------------------------FNVMIDGYVKLGCMDMAQDLFDKMRDKNVI 265
N M+D Y K G ++ A+ LFD M +K+ +
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 266 SWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
+WT+M+ GY + D E+AR + + MP+K++ WNA+I + +N +P+EAL +F E+ +
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 326 SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRA 385
+++ N++TL+S L A A +GAL+LG WI + ++ + + V++ALI MY+KCG++ ++
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 386 RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
R +F + +++ W+A+I G A++G EA+++F M +PN +T V AC+H
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 446 GLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSS 504
GLVDE F ME +GI P+ +HY C+VD+LGR+G L++A I+ MP + + +
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 539
Query: 505 FLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGS 564
L AC +++ AE +++E G +VLL N+YA +W +V +++ M++ G
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 599
Query: 565 YKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
KE CS IE+DG EF++GD H E + L ++ + +K
Sbjct: 600 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 199/544 (36%), Positives = 311/544 (57%), Gaps = 24/544 (4%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFF 84
CKS+ L QIHA ++R ++ + NL++ FI++ +S + S S + F
Sbjct: 20 CKSE---IHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSV----------F 66
Query: 85 DATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
+ +L N +I + +S F F + R M +P +TF ++K
Sbjct: 67 ERVPSPGTYLWNHLI------KGYSNKFLFFETV--SILMRMMRTGLARPDEYTFPLVMK 118
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
C+ R G VHG+ ++ GF D+ V T+ VD Y K L SARKVF EM ER+ VS
Sbjct: 119 VCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVS 178
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV 264
WTA++V Y + G++ EA+ +FD+MPER++ ++N ++DG VK G + A+ LFD+M +++
Sbjct: 179 WTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
IS+TSM+ GY + GD+ SAR +F+ ++ W+A+I G+ +N QP+EA K+F EM +
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC-A 297
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLGGWIQGF-ARRKKLDGSVRVSTALIDMYAKCGEIG 383
+V+P+E ++ ++ A + +G +L + + +R S V ALIDM AKCG +
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 384 RARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
RA LFEEMP+++ S+ +++ G A++G EA+ +FE M+ EG P+E+ +L C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 444 HCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIIL 502
LV+EG R F+ M + + I +HY C+V+LL R G L EA LI++MPF+A+
Sbjct: 418 QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW 477
Query: 503 SSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
S L C + AE V R ++E + AG YVLL N+YA RWTDV ++ M
Sbjct: 478 GSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNEN 537
Query: 563 GSYK 566
G K
Sbjct: 538 GITK 541
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 286/532 (53%), Gaps = 41/532 (7%)
Query: 75 SIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP 134
+IV + +R + D F ++ R+F E ++ D M + P
Sbjct: 52 NIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYID---------MHNSGIPP 102
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
H T++++ C +G +H A+KNG C +YV T LV +Y + G + A+K F
Sbjct: 103 SSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAF 162
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV--------------------- 233
D+++E++ VSW +++ GY G++ EAR++FD +PE+D
Sbjct: 163 DDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACS 222
Query: 234 ----------AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESA 283
A++N++I GYV M +A+ FD M KN +SW +M+SGY + GDV+SA
Sbjct: 223 LFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSA 282
Query: 284 RLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS-VEPNEVTLLSVLPAVA 342
+F LM +K+ ++AMI + +N +P +ALKLF +ML S ++P+E+TL SV+ A +
Sbjct: 283 EELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS 342
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNA 402
LG G W++ + + +ST+LID+Y K G+ +A +F + +K+T S++A
Sbjct: 343 QLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSA 402
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
+I G +NG A EA +F MI + PN +T G+LSA +H GLV EG +CF +M+
Sbjct: 403 MIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHN 462
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVL 522
+ P +HYG MVD+LGRAG L+EA LI++MP N + + L A G +V E
Sbjct: 463 LEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIAC 522
Query: 523 RETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIE 574
VK+E + G L +Y++ RW D V+ +K + K + CS +E
Sbjct: 523 SHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 174/430 (40%), Positives = 248/430 (57%), Gaps = 6/430 (1%)
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF 236
L M GV+ SA KVF EM E++ V WT++I GY D+ AR+ FD+ PERD+ +
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
N MI GY+++G M A+ LFD+M ++V+SW +++ GY GD+E+ +FD MPE+N+F
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WN +I G+ +N + E L F+ M+ SV PN+ T+ VL A A LGA D G W+ +
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 357 ARR---KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
K+D V V ALIDMY KCG I A +F+ + ++ SWN +ING A +G
Sbjct: 214 GETLGYNKVD--VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGC 472
EAL +F M G P+++T +GVL AC H GLV++G F +M F I P+IEH GC
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
+VDLL RAG L +A I MP A+ +I ++ L A +K V E L E +K+E
Sbjct: 332 VVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRN 391
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNL 592
++V+L N+Y R+ D +K M+ G KE S IE D +F + H
Sbjct: 392 PANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRT 451
Query: 593 EVIQLTLGQL 602
E +Q L +L
Sbjct: 452 EELQRILREL 461
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 70/403 (17%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
ARR+FD + +RD L N+MI+ + + E +LF +
Sbjct: 78 ARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP-------------------- 117
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
C D+ +++ Y G + + +VFD+M E
Sbjct: 118 ----------------------------CRDVMSWNTVLEGYANIGDMEACERVFDDMPE 149
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-----DVAAFNVMIDGYVKLGCMDMAQD 254
R+ SW +I GY + G +SE F M + + A +++ KLG D +
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 255 L--------FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
+ ++K+ D NV + +++ Y + G +E A +F + ++L +WN MI G
Sbjct: 210 VHKYGETLGYNKV-DVNVKN--ALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGS 365
+ EAL LF EM ++ + P++VT + VL A +G ++ G + +
Sbjct: 267 AHGHGTEALNLFHEM-KNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMI 424
+ ++D+ ++ G + +A +MP K A W L+ V + E +I
Sbjct: 326 IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI 385
Query: 425 R-EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
+ E P M+ + G D+ R AM G +
Sbjct: 386 KLEPRNPANFVMLSNIYG--DAGRFDDAARLKVAMRDTGFKKE 426
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 199/554 (35%), Positives = 286/554 (51%), Gaps = 55/554 (9%)
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMAT 152
+ N M+ + + F++ LF +L RG P T ++K
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGEL-RGQG--------LYPDNFTLPVVLKSIGRLRKV 62
Query: 153 REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGY 212
EG +VHG AVK G D YV+ +L+ MY G + KVFDEM +R VSW +I Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 213 TRCGDMSEARKLFDVMPERDVAAF------------------------------------ 236
G +A +F M + F
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSV 182
Query: 237 ---NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK 293
N ++D + K GC+D A+ +FD MRDKNV WTSMV GY G ++ AR++F+ P K
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
++ W AM+ G+ + + EAL+LFR M +A + P+ L+S+L A GAL+ G WI
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
G+ ++ V TAL+DMYAKCG I A +F E+ E++TASW +LI G A+NG +
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGC 472
AL+++ M G R + IT + VL+ACNH G V EGR+ F +M E + P+ EH C
Sbjct: 362 GRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSC 421
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILS---SFLFACGHFKDVSRAERVLRETVKME 529
++DLL RAG LDEAE LI M +++ ++ S L A ++ +V AERV + K+E
Sbjct: 422 LIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVE 481
Query: 530 KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYL- 588
+ + LL ++YA+ RW DV +V+ MK G K CS IE+DG EF+ GD L
Sbjct: 482 VSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLL 541
Query: 589 -HSNLEVIQLTLGQ 601
H ++ I L Q
Sbjct: 542 SHPKMDEINSMLHQ 555
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 50/351 (14%)
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ FD +RD N +I+++ +F + +F+ + + + + F G T +
Sbjct: 102 KVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLK------FDEG--TIVS 153
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+ C+A G ++ V F + + + ALVDM+ K G L AR VFD M +++
Sbjct: 154 TLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKN 212
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM-- 259
WT+++ GY G + EAR LF+ P +DV + M++GYV+ D A +LF M
Sbjct: 213 VKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Query: 260 ---RDKNVI-----------------SW-----------------TSMVSGYCQNGDVES 282
R N + W T++V Y + G +E+
Sbjct: 273 AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIET 332
Query: 283 ARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
A +F + E++ +W ++I G N AL L+ EM + V + +T ++VL A
Sbjct: 333 ALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM-ENVGVRLDAITFVAVLTACN 391
Query: 343 DLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM 392
G + G I R + + LID+ + G + A L ++M
Sbjct: 392 HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
L+ +L +N M+ K + L LF E L + P+ TL VL ++ L +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGE-LRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
G + G+A + L+ VS +L+ MYA G+I +F+EMP+++ SWN LI+ +
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 409 VNGRAKEALEVFEMMIRE-GFRPNEITMIGVLSACNHCGLVDEGRRCFK-AMEGFGIAPQ 466
NGR ++A+ VF+ M +E + +E T++ LSAC+ ++ G R ++ + F ++ +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
I + +VD+ + GCLD+A + +M D N +S +F
Sbjct: 184 IGN--ALVDMFCKCGCLDKARAVFDSMR-DKNVKCWTSMVFG 222
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 107/252 (42%), Gaps = 59/252 (23%)
Query: 65 VSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTAT 124
VST R +EA R F+ + +D L +M+ + +F E LFR C TA
Sbjct: 224 VSTGRIDEA-------RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR--CMQTA- 273
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+P +L+ GC A +G +HG +N +D V TALVDMY K
Sbjct: 274 ------GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVG--------------------------------Y 212
G + +A +VF E+ ER SWT++I G
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 213 TRC---GDMSEARKLFDVMPERDVAA-----FNVMIDGYVKLGCMDMAQDLFDKMRDKNV 264
T C G ++E RK+F M ER + +ID + G +D A++L DKMR +
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGE-- 445
Query: 265 ISWTSMVSGYCQ 276
S ++V YC
Sbjct: 446 -SDETLVPVYCS 456
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 303/591 (51%), Gaps = 36/591 (6%)
Query: 30 TITTLLQIHAFMLRNSVDNN---LNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDA 86
T+ L QIH ++ + + ++ +NLL K R +++ F
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLK--------------RTLFFRQTKYSYLLFSH 70
Query: 87 THKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGC 146
T + FL NS+I F E LF + + G TF ++K C
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK---------HGLYLHGFTFPLVLKAC 121
Query: 147 TACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWT 206
T + + G+++H + VK GF D+ T+L+ +Y G L A K+FDE+ +RS V+WT
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 207 AVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMI----DGYVKLGCMDMAQDLFDKMRD- 261
A+ GYT G EA LF M E V + I V +G +D + + M +
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEM 241
Query: 262 ---KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLF 318
KN T++V+ Y + G +E AR +FD M EK++ TW+ MI G+ N P E ++LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
+ML +++P++ +++ L + A LGALDLG W R + ++ ++ ALIDMYAK
Sbjct: 302 LQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 360
Query: 379 CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGV 438
CG + R +F+EM EK+ NA I+G A NG K + VF + G P+ T +G+
Sbjct: 361 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 420
Query: 439 LSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
L C H GL+ +G R F A+ + + +EHYGCMVDL GRAG LD+A LI MP
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 498 NGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKH 557
N I+ + L C KD AE VL+E + +E AG+YV L N+Y+ RW + +V+
Sbjct: 481 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 540
Query: 558 MMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
MM +G K S IE++G+ EF+A D H + I L L M++
Sbjct: 541 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRL 591
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/439 (39%), Positives = 255/439 (58%), Gaps = 2/439 (0%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D+ ++ Y + G + AR++FDE + +WTA++ GY + + EAR+LFD MP
Sbjct: 249 DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP 308
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
ER+ ++N M+ GYV+ M+MA++LFD M +NV +W +M++GY Q G + A+ +FD
Sbjct: 309 ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
MP+++ +W AMI G+ ++ EAL+LF +M N + S L AD+ AL+L
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALSTCADVVALEL 427
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G + G + + V AL+ MY KCG I A LF+EM K+ SWN +I G++
Sbjct: 428 GKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSR 487
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIE 468
+G + AL FE M REG +P++ TM+ VLSAC+H GLVD+GR+ F M + +G+ P +
Sbjct: 488 HGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKM 528
HY CMVDLLGRAG L++A NL++ MPF+ + I + L A + AE + M
Sbjct: 548 HYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Query: 529 EKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYL 588
E E +G YVLL NLYA+ RW DV ++ M+ +G K S IE+ + F GD
Sbjct: 608 EPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEF 667
Query: 589 HSNLEVIQLTLGQLWKHMK 607
H + I L +L MK
Sbjct: 668 HPEKDEIFAFLEELDLRMK 686
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 185/382 (48%), Gaps = 73/382 (19%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
++ Y++ G ARK+FDEM ER VSW +I GY R ++ +AR+LF++MPERDV
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC 158
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
++N M+ GY + GC+D A+ +FD+M +KN +SW +++S Y QN +E A ++F
Sbjct: 159 SWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWA 218
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD------ 348
L +WN ++GG K K+ EA + F M + V N +++ A G +D
Sbjct: 219 LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWN-----TIITGYAQSGKIDEARQLF 273
Query: 349 --------------LGGWIQ---------------------------GFARRKKLD---- 363
+ G+IQ G+ + ++++
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 364 -------GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
+V +I YA+CG+I A+ LF++MP+++ SW A+I G++ +G + EA
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD- 475
L +F M REG R N + LS C ++ G++ + G GC V
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET-----GCFVGN 448
Query: 476 ----LLGRAGCLDEAENLIQTM 493
+ + G ++EA +L + M
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEM 470
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 177/338 (52%), Gaps = 43/338 (12%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D+ + Y++ G A +VF M S VS+ +I GY R G+ ARKLFD MP
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
ERD+ ++NVMI GYV+ + A++LF+ M +++V SW +M+SGY QNG V+ AR +FD
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
MPEKN +WNA++ + +N + EA LF+ A V N +
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL----------------- 225
Query: 350 GGWIQGFARRKKL--------DGSVR--VS-TALIDMYAKCGEIGRARLLFEEMPEKETA 398
+ GF ++KK+ +VR VS +I YA+ G+I AR LF+E P ++
Sbjct: 226 ---LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
+W A+++G+ N +EA E+F+ M NE++ +L+ G V +G R A
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLA-----GYV-QGERMEMAK 332
Query: 459 EGFGIAP--QIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
E F + P + + M+ + G + EA+NL MP
Sbjct: 333 ELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP 370
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 54/236 (22%)
Query: 261 DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFRE 320
D ++ W +S Y + G A +F MP + ++N MI G+ +N + A KLF E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGW---IQGFARRKKLDGSVRVSTALIDMYA 377
M P DL W I+G+ R + L
Sbjct: 121 M-------PER----------------DLVSWNVMIKGYVRNRNL--------------- 142
Query: 378 KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
G+AR LFE MPE++ SWN +++G+A NG +A VF+ M + N+++
Sbjct: 143 -----GKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNA 193
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+LSA ++E FK+ E + + + C++ + + EA +M
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVS----WNCLLGGFVKKKKIVEARQFFDSM 245
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 101/257 (39%), Gaps = 32/257 (12%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC-RGTATRTMTMTPFKPGGHT 138
A+ FD R+ N+MIT + + SE LF + R + + + GH+
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHS 390
Query: 139 FTAL---------------------VKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
F AL + C +A G ++HG VK G+ +V AL
Sbjct: 391 FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DV 233
+ MY K G + A +F EM+ + VSW +I GY+R G A + F+ M D
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 234 AAFNVMIDGYVKLGCMDMAQDLFDKMRD-----KNVISWTSMVSGYCQNGDVESARLMFD 288
A ++ G +D + F M N + MV + G +E A +
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 289 LMP-EKNLFTWNAMIGG 304
MP E + W ++G
Sbjct: 571 NMPFEPDAAIWGTLLGA 587
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 289/545 (53%), Gaps = 29/545 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR+ FD +RD N+++ + + + +C KP
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN---------LKPSF 236
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +++ +A G E+HG A+++GF + ++TALVDMY K G L +AR++FD
Sbjct: 237 ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
M ER+ VSW ++I Y + + EA +F M + V +V + +G + DL
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV-----MGALHACADLG 351
Query: 257 DKMR-------------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
D R D+NV S++S YC+ +V++A MF + + L +WNAMI
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G +N +P +AL F +M S +V+P+ T +SV+ A+A+L WI G R LD
Sbjct: 412 GFAQNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD 470
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
+V V+TAL+DMYAKCG I ARL+F+ M E+ +WNA+I+G+ +G K ALE+FE M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGC 482
+ +PN +T + V+SAC+H GLV+ G +CF M E + I ++HYG MVDLLGRAG
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGR 590
Query: 483 LDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
L+EA + I MP + + L AC K+V+ AE+ ++ + G +VLL N+
Sbjct: 591 LNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANI 650
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
Y W V V+ M +G K CS++E+ F +G H + + I L +L
Sbjct: 651 YRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Query: 603 WKHMK 607
H+K
Sbjct: 711 ICHIK 715
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 71/380 (18%)
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
C + +E ++ + KNG + + T LV ++ ++G + A +VF+ + + V + +
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 209 IVGYTRCGDMSEARKLF------DVMP--------------------------------- 229
+ G+ + D+ +A + F DV P
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
D+ A + + Y K ++ A+ +FD+M +++++SW ++V+GY QNG A M
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
M E+NL +P+ +T++SVLPAV+ L + +
Sbjct: 227 MCEENL--------------------------------KPSFITIVSVLPAVSALRLISV 254
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G I G+A R D V +STAL+DMYAKCG + AR LF+ M E+ SWN++I+ +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
N KEA+ +F+ M+ EG +P +++++G L AC G ++ GR K G+ +
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 470 YGCMVDLLGRAGCLDEAENL 489
++ + + +D A ++
Sbjct: 375 VNSLISMYCKCKEVDTAASM 394
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
T +VS +C+ G V+ A +F+ + K ++ M+ G K +AL+ F M V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DV 131
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
EP +L D L +G I G + + T L +MYAKC ++ AR
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARK 191
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+F+ MPE++ SWN ++ G++ NG A+ ALE+ + M E +P+ IT++ VL A + L
Sbjct: 192 VFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ G+ G + +VD+ + G L+ A L M
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 314/595 (52%), Gaps = 81/595 (13%)
Query: 24 QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
Q + +TI L QIHA +++ + A+ + CA+ + + +A +
Sbjct: 29 QINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRD-------LDYAHKI 81
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEP--------FTLFRDLCRGTATRTMTMTPFKPG 135
F+ +R+ F N++I R FSE TLF ++ M+ +P
Sbjct: 82 FNQMPQRNCFSWNTII------RGFSESDEDKALIAITLFYEM--------MSDEFVEPN 127
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
TF +++K C +EG ++HG+A+K GF D +V + LV MYV
Sbjct: 128 RFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVM------------ 175
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
CG M +AR LF + E+D+ VM D
Sbjct: 176 -------------------CGFMKDARVLFYKNIIEKDMV---VMTD------------- 200
Query: 255 LFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEA 314
+ RD ++ W M+ GY + GD ++AR++FD M ++++ +WN MI G+ N +A
Sbjct: 201 --RRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDA 258
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
+++FREM + PN VTL+SVLPA++ LG+L+LG W+ +A + + +ALID
Sbjct: 259 VEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
MY+KCG I +A +FE +P + +W+A+INGFA++G+A +A++ F M + G RP+++
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
I +L+AC+H GLV+EGRR F M G+ P+IEHYGCMVDLLGR+G LDEAE I M
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 494 PFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVE 553
P + +I + L AC +V +RV + M +G YV L N+YA++ W++V
Sbjct: 438 PIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVS 497
Query: 554 DVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
+++ MK + K+ CS+I++DG EFV D H + I L ++ +++
Sbjct: 498 EMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 327/657 (49%), Gaps = 67/657 (10%)
Query: 8 QRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNL----------NLLAKFI 57
R+L+S ++R+ L + K H+F+L N + + L + A+ I
Sbjct: 20 NRSLYSHSQRRTRSLPHHRDKPI--NWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMI 77
Query: 58 TTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITT-HFAIRQFSEP----- 111
+ S R A + +R + D + K + + N I + + IR FSE
Sbjct: 78 INGLILDPFASSRLIAFCALSESR-YLDYSVKILKGIENPNIFSWNVTIRGFSESENPKE 136
Query: 112 -FTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLD 170
F L++ + R + +P T+ L K C + G + G +K L
Sbjct: 137 SFLLYKQMLRHGCCES------RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELV 190
Query: 171 LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE 230
+V A + M+ G + +ARKVFDE R VSW +I GY + G+ +A ++ +M
Sbjct: 191 SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 231 RDVAA---------------------------------------FNVMIDGYVKLGCMDM 251
V N ++D + K G +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 252 AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
A+ +FD + + ++SWT+M+SGY + G ++ +R +FD M EK++ WNAMIGG + K+
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
+AL LF+EM +++ +P+E+T++ L A + LGALD+G WI + + L +V + T+
Sbjct: 371 QDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTS 429
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
L+DMYAKCG I A +F + + + ++ A+I G A++G A A+ F MI G P+
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
EIT IG+LSAC H G++ GR F M+ F + PQ++HY MVDLLGRAG L+EA+ L+
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
++MP +A+ + + LF C +V E+ ++ ++++ +G YVLL +Y W
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWE 609
Query: 551 DVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
D + + MM RG K CS IEV+G EF+ D E I L L +HM+
Sbjct: 610 DAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 315 bits (806), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 312/622 (50%), Gaps = 74/622 (11%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAK-FITTCASIAVSTSRRNEAVSIVRHARRFFDAT 87
KT Q+H+ + V N K F+ C+ + S +A + F
Sbjct: 45 KTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVS----------YAYKLFVKI 94
Query: 88 HKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKG-- 145
+ D + N+MI + E L+ ++ + T P HTF L+ G
Sbjct: 95 PEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT---------PDSHTFPFLLNGLK 145
Query: 146 ----CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
AC G ++H VK G +LYV ALV MY G++ AR VFD +
Sbjct: 146 RDGGALAC-----GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF------------------------- 236
SW +I GY R + E+ +L M ER++ +
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 237 ---------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVE 281
N +++ Y G MD+A +F M+ ++VISWTS+V GY + G+++
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLK 319
Query: 282 SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
AR FD MP ++ +W MI G+ + +E+L++FREM SA + P+E T++SVL A
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM-QSAGMIPDEFTMVSVLTAC 378
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWN 401
A LG+L++G WI+ + + K+ V V ALIDMY KCG +A+ +F +M +++ +W
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWT 438
Query: 402 ALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG- 460
A++ G A NG+ +EA++VF M +P++IT +GVLSACNH G+VD+ R+ F M
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 461 FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAER 520
I P + HYGCMVD+LGRAG + EA +++ MP + N I+ + L A D AE
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAEL 558
Query: 521 VLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFR 580
++ +++E + Y LL N+YA KRW D+ +V+ + K S+IEV+G
Sbjct: 559 AAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Query: 581 EFVAGDYLHSNLEVIQLTLGQL 602
EFVAGD H E I + L +L
Sbjct: 619 EFVAGDKSHLQSEEIYMKLEEL 640
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 244/429 (56%), Gaps = 3/429 (0%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D + ++ YV+ A+ FD M + SW +I GY R G+M +AR+LF M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMF-D 288
E++ ++N MI GY++ G ++ A F + V++WT+M++GY + VE A MF D
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
+ KNL TWNAMI G+ +N +P + LKLFR ML + PN L S L ++L AL
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML-EEGIRPNSSGLSSALLGCSELSALQ 301
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
LG I + L V T+LI MY KCGE+G A LFE M +K+ +WNA+I+G+A
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQI 467
+G A +AL +F MI RP+ IT + VL ACNH GLV+ G F++M + + PQ
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
+HY CMVDLLGRAG L+EA LI++MPF + + + L AC K+V AE + ++
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 528 MEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDY 587
+ + A YV L N+YA++ RW DV V+ MK K S IE+ + F + D
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDR 541
Query: 588 LHSNLEVIQ 596
+H L+ I
Sbjct: 542 IHPELDSIH 550
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 18/218 (8%)
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTAL 142
F D T ++ N+MI+ + + + LFR M +P ++
Sbjct: 240 FKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFR---------AMLEEGIRPNSSGLSSA 290
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR 202
+ GC+ A + G ++H + K+ C D+ T+L+ MY K G LG A K+F+ M ++
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 203 VSWTAVIVGYTRCGDMSEA----RKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK 258
V+W A+I GY + G+ +A R++ D D F ++ G +++ F+
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 259 M-RDKNVIS----WTSMVSGYCQNGDVESARLMFDLMP 291
M RD V +T MV + G +E A + MP
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/585 (32%), Positives = 296/585 (50%), Gaps = 55/585 (9%)
Query: 34 LLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEF 93
L QIHA +L + + L+ K I +S T AR+ FD + F
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDIT-----------FARQVFDDLPRPQIF 85
Query: 94 LCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
N++I + F + ++ + M + P TF L+K C+ +
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSN---------MQLARVSPDSFTFPHLLKACSGLSHLQ 136
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD--EMSERSRVSWTAVIVG 211
G VH + GF D++V L+ +Y K LGSAR VF+ + ER+ VSWTA++
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196
Query: 212 YTRCGDMSEARKLFDVMPERDVA-----------AFNVMID---------GYVKLGCMDM 251
Y + G+ EA ++F M + DV AF + D VK+G +++
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG-LEI 255
Query: 252 AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
DL +IS +M Y + G V +A+++FD M NL WNAMI G+ KN
Sbjct: 256 EPDL--------LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
EA+ +F EM+ + V P+ +++ S + A A +G+L+ + + R V +S+A
Sbjct: 305 REAIDMFHEMI-NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
LIDM+AKCG + ARL+F+ +++ W+A+I G+ ++GRA+EA+ ++ M R G PN
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
++T +G+L ACNH G+V EG F M I PQ +HY C++DLLGRAG LD+A +I+
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
Query: 492 TMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTD 551
MP + + L AC + V E ++ ++ G YV L NLYA + W
Sbjct: 484 CMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDR 543
Query: 552 VEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQ 596
V +V+ MK +G K+V CS +EV GR F GD H E I+
Sbjct: 544 VAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIE 588
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 163/431 (37%), Positives = 259/431 (60%), Gaps = 4/431 (0%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
T+++ K G + AR++FDEMSERS ++WT ++ GY + + +ARK+FDVMPE+
Sbjct: 176 TSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV 235
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
++ M+ GYV+ G ++ A++LF+ M K VI+ +M+SG Q G++ AR +FD M E+N
Sbjct: 236 SWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERN 295
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+W +I H +N EAL LF ++ V P TL+S+L A L +L G +
Sbjct: 296 DASWQTVIKIHERNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLHHGKQVH 354
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
R + D V V++ L+ MY KCGE+ +++L+F+ P K+ WN++I+G+A +G +
Sbjct: 355 AQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGE 414
Query: 415 EALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGC 472
EAL+VF EM + +PNE+T + LSAC++ G+V+EG + +++ME FG+ P HY C
Sbjct: 415 EALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYAC 474
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
MVD+LGRAG +EA +I +M + + + S L AC + AE ++ +++E E
Sbjct: 475 MVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN 534
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDY-LHSN 591
+G Y+LL N+YA++ RW DV +++ +MK R K CS EV+ + F G H
Sbjct: 535 SGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPE 594
Query: 592 LEVIQLTLGQL 602
E I L +L
Sbjct: 595 QESILKILDEL 605
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 162/289 (56%), Gaps = 28/289 (9%)
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCM 249
ARK+FDEM +R+ +SW ++ GY + G++ EARK+FD+MPER+V ++ ++ GYV G +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
D+A+ LF KM +KN +SWT M+ G+ Q+G ++ A +++++P+K+ +MI G CK
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 310 QPHEALKLFREM----------LMSASVEPNEV----TLLSVLPAVADLGALDLGGWIQG 355
+ EA ++F EM +++ + N V + V+P ++ + + G
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM---LMG 243
Query: 356 FARRKKLDGS-----------VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
+ + +++ + V A+I + GEI +AR +F+ M E+ ASW +I
Sbjct: 244 YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
NG EAL++F +M ++G RP T+I +LS C + G++
Sbjct: 304 KIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 153/277 (55%), Gaps = 13/277 (4%)
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
+ G + ARK+FD +S SW +++ GY +ARKLFD MP+R++ ++N ++ G
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSG 88
Query: 243 YVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
Y+K G +D A+ +FD M ++NV+SWT++V GY NG V+ A +F MPEKN +W M+
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
G ++ + +A KL+ EM+ + + + S++ + G +D I +
Sbjct: 149 IGFLQDGRIDDACKLY-EMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER-- 201
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
SV T ++ Y + + AR +F+ MPEK SW +++ G+ NGR ++A E+FE+
Sbjct: 202 --SVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
M +P I ++S G + + RR F +M+
Sbjct: 260 M---PVKP-VIACNAMISGLGQKGEIAKARRVFDSMK 292
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 17 RKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLL----AKFITTCASIAVSTSRRNE 72
RK D++ K++ + T++L ++ +++ L K + C ++ ++ E
Sbjct: 223 RKIFDVMPEKTEVSWTSMLM--GYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGE 280
Query: 73 AVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPF 132
+ ARR FD+ +R++ ++I H E LF M
Sbjct: 281 ----IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI---------LMQKQGV 327
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P T +++ C + + G +VH V+ F +D+YVA+ L+ MY+K G L ++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
+FD + + W ++I GY G EA K+F MP
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 196/584 (33%), Positives = 299/584 (51%), Gaps = 97/584 (16%)
Query: 29 KTITTLLQIHAFMLRNSVD-NNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDAT 87
+ TL Q H +M+ ++ +NLN+ AKFI C++ +R+A F
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNV-AKFIEACSN-----------AGHLRYAYSVFTHQ 73
Query: 88 HKRDEFLCNSMITTHFAIRQFSEP------FTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ +L N+MI A+ EP T++R L A KP TF
Sbjct: 74 PCPNTYLHNTMIR---ALSLLDEPNAHSIAITVYRKLWALCA---------KPDTFTFPF 121
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++K G ++HG V GF ++V T L+ M
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM--------------------- 160
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
Y CG + +ARK+F D+M
Sbjct: 161 ----------YFSCGGLGDARKMF-------------------------------DEMLV 179
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMP--EKNLFTWNAMIGGHCKNKQPHEALKLFR 319
K+V W ++++GY + G+++ AR + ++MP +N +W +I G+ K+ + EA+++F+
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
MLM +VEP+EVTLL+VL A ADLG+L+LG I + + ++ +V ++ A+IDMYAK
Sbjct: 240 RMLME-NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKS 298
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G I +A +FE + E+ +W +I G A +G EAL +F M++ G RPN++T I +L
Sbjct: 299 GNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
Query: 440 SACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDAN 498
SAC+H G VD G+R F +M +GI P IEHYGCM+DLLGRAG L EA+ +I++MPF AN
Sbjct: 359 SACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 499 GIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHM 558
I S L A D+ ER L E +K+E +G+Y+LL NLY+ RW + +++M
Sbjct: 419 AAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNM 478
Query: 559 MKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
MK G K S IEV+ R +F++GD H +E I L ++
Sbjct: 479 MKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 298/555 (53%), Gaps = 59/555 (10%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
K I TL QIHA M+ N + +NL+++ + I + AS++V + +++A + FD
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNLSVVGELIYS-ASLSVPGA--------LKYAHKLFDEIP 73
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDL-CRGTATRTMTMTPFKPGGHTFTALVKGCT 147
K D +CN ++ + + +L+ ++ RG + P +TFT ++K C+
Sbjct: 74 KPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVS----------PDRYTFTFVLKACS 123
Query: 148 ACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTA 207
G HG V++GF L+ YV AL
Sbjct: 124 KLEWRSNGFAFHGKVVRHGFVLNEYVKNAL------------------------------ 153
Query: 208 VIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW 267
I+ + CGD+ A +LFD + A++ M GY K G +D A LFD+M K+ ++W
Sbjct: 154 -ILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 212
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
M++G + +++SAR +FD EK++ TWNAMI G+ P EAL +F+EM A
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM-RDAGE 271
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFA-RRKKLDGSVRVST----ALIDMYAKCGEI 382
P+ VT+LS+L A A LG L+ G + + + S+ V T ALIDMYAKCG I
Sbjct: 272 HPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSI 331
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
RA +F + +++ ++WN LI G A++ A+ ++E+FE M R PNE+T IGV+ AC
Sbjct: 332 DRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILAC 390
Query: 443 NHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGII 501
+H G VDEGR+ F M + + I P I+HYGCMVD+LGRAG L+EA +++M + N I+
Sbjct: 391 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV 450
Query: 502 LSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKM 561
+ L AC + +V + + + M K+ +GDYVLL N+YA+ +W V+ V+ M
Sbjct: 451 WRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDD 510
Query: 562 RGSYKEVACSVIEVD 576
K S+IE D
Sbjct: 511 TRVKKPTGVSLIEED 525
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 281/553 (50%), Gaps = 80/553 (14%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P H L K C A + G ++H V+ +G +D +V ++ MY++ G +G ARKV
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 194 FDEMSER-----------------------------------SRVSWTAVIVGYTRCGDM 218
FD MS++ + VSW ++ G+ R G
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 219 SEARKLFD----------------VMPE-----------------------RDVAAFNVM 239
EA +F V+P +D + M
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 240 IDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
ID Y K G + LF++ + ++G +NG V+ A MF+L E+ N+
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV 353
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+W ++I G +N + EAL+LFREM + A V+PN VT+ S+LPA ++ AL G G
Sbjct: 354 VSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTIPSMLPACGNIAALGHGRSTHG 412
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
FA R L +V V +ALIDMYAKCG I ++++F MP K WN+L+NGF+++G+AKE
Sbjct: 413 FAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMV 474
+ +FE ++R +P+ I+ +LSAC GL DEG + FK M E +GI P++EHY CMV
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMV 532
Query: 475 DLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAG 534
+LLGRAG L EA +LI+ MPF+ + + + L +C +V AE + +E E G
Sbjct: 533 NLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPG 592
Query: 535 DYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEV 594
YVLL N+YA + WT+V+ +++ M+ G K CS I+V R +AGD H ++
Sbjct: 593 TYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQ 652
Query: 595 IQLTLGQLWKHMK 607
I + ++ K M+
Sbjct: 653 ITEKMDEISKEMR 665
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 91/196 (46%), Gaps = 1/196 (0%)
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
+++ Y A L+ +P+ +++++++I K K +++ +F M S + P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF-SHGLIP 114
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ L ++ A+L A +G I + LD V ++ MY +CG +G AR +F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+ M +K+ + +AL+ +A G +E + + M G N ++ G+LS N G
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHK 234
Query: 450 EGRRCFKAMEGFGIAP 465
E F+ + G P
Sbjct: 235 EAVVMFQKIHHLGFCP 250
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 19/250 (7%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M + KP T +++ C A G HG AV+ +++V +AL+DMY K
Sbjct: 377 REMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC 436
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD-VMPER---DVAAFNVMI 240
G + ++ VF+ M ++ V W +++ G++ G E +F+ +M R D +F ++
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 241 DGYVKLGCMDMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMP-EKN 294
++G D F M ++ I ++ MV+ + G ++ A + MP E +
Sbjct: 497 SACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE-PNEVTLLSVLPAVADLGALDLGGWI 353
W A++ C+ + + ++ E L E P LLS + A G W
Sbjct: 557 SCVWGALLNS-CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK-------GMWT 608
Query: 354 QGFARRKKLD 363
+ + R K++
Sbjct: 609 EVDSIRNKME 618
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 305 bits (780), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 297/586 (50%), Gaps = 41/586 (6%)
Query: 36 QIHAFML------RNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHK 89
Q+H F+L RNSV N+L V+ +N+ V AR+ FD +
Sbjct: 216 QLHGFILKSGFGERNSVGNSL--------------VAFYLKNQRVD---SARKVFDEMTE 258
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
RD NS+I + + + ++F M ++ + T ++ GC
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQ---------MLVSGIEIDLATIVSVFAGCADS 309
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
G VH + VK F + L+DMY K G L SA+ VF EMS+RS VS+T++I
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 210 VGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKN-- 263
GY R G EA KLF+ M E DV +++ + +D + + + +++ +
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 264 --VISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
+ +++ Y + G ++ A L+F M K++ +WN +IGG+ KN +EAL LF +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
L P+E T+ VLPA A L A D G I G+ R V+ +L+DMYAKCG
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGA 549
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
+ A +LF+++ K+ SW +I G+ ++G KEA+ +F M + G +EI+ + +L A
Sbjct: 550 LLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYA 609
Query: 442 CNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGI 500
C+H GLVDEG R F M I P +EHY C+VD+L R G L +A I+ MP +
Sbjct: 610 CSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDAT 669
Query: 501 ILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMK 560
I + L C DV AE+V + ++E E G YVL+ N+YA ++W V+ ++ +
Sbjct: 670 IWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIG 729
Query: 561 MRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
RG K CS IE+ GR FVAGD + E I+ L ++ M
Sbjct: 730 QRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 13/239 (5%)
Query: 261 DKNVISWTSMVSGYCQNGDVESARLMFD-LMPEKNLFTWNAMIGGHCKNKQPHEALKLFR 319
D N+ S S++ Y GD++ A +FD + EK LF WN ++ K+ ++ LF+
Sbjct: 128 DSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFK 184
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
+M MS+ VE + T V + + L ++ G + GF + V +L+ Y K
Sbjct: 185 KM-MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 243
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
+ AR +F+EM E++ SWN++ING+ NG A++ L VF M+ G + T++ V
Sbjct: 244 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 303
Query: 440 SACNHCGLVDEGRRCFKAMEGFGI----APQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+ C L+ GR A+ G+ + + ++D+ + G LD A+ + + M
Sbjct: 304 AGCADSRLISLGR----AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMS 358
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 295/553 (53%), Gaps = 29/553 (5%)
Query: 67 TSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRT 126
T R E ++ R+ D T D F NS+I +E F ++ R
Sbjct: 19 TERHTERQNLTTLFNRYVDKT---DVFSWNSVIADLARSGDSAEALLAF------SSMRK 69
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
+++ P + +F +K C++ G + H A G+ D++V++AL+ MY G
Sbjct: 70 LSLYPTRS---SFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGK 126
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF-----DVMPERDVAAFNVMID 241
L ARKVFDE+ +R+ VSWT++I GY G+ +A LF D + D + M
Sbjct: 127 LEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGL 186
Query: 242 GYVKLGCMDM-AQDLFDKMR--------DKNVISWTSMVSGYCQNGD--VESARLMFDLM 290
V C + A+ L + + D+ V +++ Y + G+ V AR +FD +
Sbjct: 187 VSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI 246
Query: 291 PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
+K+ ++N+++ + ++ +EA ++FR ++ + V N +TL +VL AV+ GAL +G
Sbjct: 247 VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG 306
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVN 410
I R L+ V V T++IDMY KCG + AR F+ M K SW A+I G+ ++
Sbjct: 307 KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMH 366
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEH 469
G A +ALE+F MI G RPN IT + VL+AC+H GL EG R F AM+G FG+ P +EH
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEH 426
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
YGCMVDLLGRAG L +A +LIQ M + II SS L AC K+V AE + +++
Sbjct: 427 YGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
Query: 530 KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
G Y+LL ++YA RW DVE V+ +MK RG K S++E++G F+ GD H
Sbjct: 487 SSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEH 546
Query: 590 SNLEVIQLTLGQL 602
E I L +L
Sbjct: 547 PQREKIYEFLAEL 559
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 281/521 (53%), Gaps = 46/521 (8%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS---A 190
P + F +++K CT M R G VHG V+ G DLY AL++MY K +GS
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 191 RKVFDEMSERSRVSWTAVIVGYT--RCGDMSEARKLFDVMPERDVAAFNVMIDGYVK--- 245
VFDEM +R+ S + T + R++F+VMP +DV ++N +I GY +
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 246 ----------LGCMDMAQDLFD--------------------------KMRDKNVISWTS 269
+G D+ D F K D +V +S
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
+V Y ++ +E + +F + ++ +WN+++ G+ +N + +EAL+LFR+M+ +A V+P
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAKVKP 341
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
V SV+PA A L L LG + G+ R ++ +++AL+DMY+KCG I AR +F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+ M + SW A+I G A++G EA+ +FE M R+G +PN++ + VL+AC+H GLVD
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Query: 450 EGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
E F +M + +G+ ++EHY + DLLGRAG L+EA N I M + G + S+ L +
Sbjct: 462 EAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Query: 509 CGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEV 568
C K++ AE+V + ++ E G YVL+ N+YA+ RW ++ ++ M+ +G K+
Sbjct: 522 CSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKP 581
Query: 569 ACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
ACS IE+ + FV+GD H +++ I L + + M+ E
Sbjct: 582 ACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKE 622
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 204/443 (46%), Gaps = 49/443 (11%)
Query: 36 QIHAFMLRNSVDNNL-------NLLAKFITTCASIAV----------STSRRNEAVSI-- 76
+H F++R +D +L N+ AK + + I+V +++ +E V
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 77 ------VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMT 130
+ RR F+ ++D N++I + + + + R+ M T
Sbjct: 186 CIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVRE---------MGTT 236
Query: 131 PFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSA 190
KP T ++++ + + +G E+HG ++ G D+Y+ ++LVDMY K + +
Sbjct: 237 DLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296
Query: 191 RKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKL 246
+VF + R +SW +++ GY + G +EA +LF M V AF+ +I L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 247 GCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
+ + + L + N+ +++V Y + G++++AR +FD M + +W A+I
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKK 361
GH + HEA+ LF EM V+PN+V ++VL A + +G +D G+ +
Sbjct: 417 MGHALHGHGHEAVSLFEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 475
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVF 420
L+ + A+ D+ + G++ A +M + T S W+ L++ +V+ + LE+
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH----KNLELA 531
Query: 421 EMMIREGFRPNEITMIGVLSACN 443
E + + F + M + CN
Sbjct: 532 EKVAEKIFTVDSENMGAYVLMCN 554
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 163/441 (36%), Positives = 252/441 (57%), Gaps = 20/441 (4%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDM-SEARKLFDVM- 228
T+ +++ + G L A K F +M+ E + +++ A++ G CGD S + L D++
Sbjct: 40 TSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSEALGDLLH 96
Query: 229 --------PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDV 280
V +I Y K G A+ +FD M DKN ++W +M+ GY ++G V
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 281 ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
++A MFD MPE++L +W AMI G K EAL FREM +S V+P+ V +++ L A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG-VKPDYVAIIAALNA 215
Query: 341 VADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASW 400
+LGAL G W+ + + +VRVS +LID+Y +CG + AR +F M ++ SW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 401 NALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME- 459
N++I GFA NG A E+L F M +GF+P+ +T G L+AC+H GLV+EG R F+ M+
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 460 GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC-GHFKDVSRA 518
+ I+P+IEHYGC+VDL RAG L++A L+Q+MP N +++ S L AC H ++ A
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLA 395
Query: 519 ERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGR 578
ER+++ + + +YV+L N+YA + +W ++ MK G K+ S IE+D
Sbjct: 396 ERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDC 455
Query: 579 FREFVAGDYLHSNLEVIQLTL 599
F+AGD H I+ L
Sbjct: 456 MHVFMAGDNAHVETTYIREVL 476
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 44/312 (14%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLE--VHGVAVKNGFCLD-LYVATALVDMYVK 183
MT+ +P TF AL+ GC + E L +HG A K G + + V TA++ MY K
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 121
Query: 184 FGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGY 243
G AR VFD M +++ V+W +I GY R G + A K+FD MPERD+ ++ MI+G+
Sbjct: 122 RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGF 181
Query: 244 VKLGCMDMAQDLFDKMR---------------------------------------DKNV 264
VK G + A F +M+ NV
Sbjct: 182 VKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNV 241
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
S++ YC+ G VE AR +F M ++ + +WN++I G N HE+L FR+M
Sbjct: 242 RVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM-QE 300
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIG 383
+P+ VT L A + +G ++ G + Q ++ + L+D+Y++ G +
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 384 RARLLFEEMPEK 395
A L + MP K
Sbjct: 361 DALKLVQSMPMK 372
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 114/271 (42%), Gaps = 66/271 (24%)
Query: 257 DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALK 316
++ + +SWTS + NL T +N + EA K
Sbjct: 29 NQSTSETTVSWTSRI----------------------NLLT---------RNGRLAEAAK 57
Query: 317 LFREMLMSASVEPNEVTLLSVLPAVADL--GALDLGGWIQGFARRKKLD-GSVRVSTALI 373
F +M + A VEPN +T +++L D G+ LG + G+A + LD V V TA+I
Sbjct: 58 EFSDMTL-AGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAII 116
Query: 374 DMYAKCGEIGRARL-------------------------------LFEEMPEKETASWNA 402
MY+K G +ARL +F++MPE++ SW A
Sbjct: 117 GMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTA 176
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
+INGF G +EAL F M G +P+ + +I L+AC + G + G + +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ ++DL R GC++ A + M
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 101/247 (40%), Gaps = 31/247 (12%)
Query: 78 RHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-----RDLCRGTAT-------- 124
+ AR FD ++ N+MI + Q +F RDL TA
Sbjct: 126 KKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKG 185
Query: 125 ---------RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVAT 175
R M ++ KP A + CT A GL VH + F ++ V+
Sbjct: 186 YQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN 245
Query: 176 ALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER---- 231
+L+D+Y + G + AR+VF M +R+ VSW +VIVG+ G+ E+ F M E+
Sbjct: 246 SLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
Query: 232 DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLM 286
D F + +G ++ F M+ IS + +V Y + G +E A +
Sbjct: 306 DAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKL 365
Query: 287 FDLMPEK 293
MP K
Sbjct: 366 VQSMPMK 372
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 273/537 (50%), Gaps = 15/537 (2%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR+ FD ++D L N+MI+ + + E +FRDL + TR T T
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTT------ 223
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
++ R G+++H +A K G YV T + +Y K G + +F E
Sbjct: 224 --LLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFRE 281
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
+ V++ A+I GYT G+ + LF ++M + ++ G + + +
Sbjct: 282 FRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAI 341
Query: 256 FDKMRDKNVISW----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
N +S T++ + Y + ++ESAR +FD PEK+L +WNAMI G+ +N
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
+A+ LFREM + PN VT+ +L A A LGAL LG W+ R + S+ VSTA
Sbjct: 402 EDAISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
LI MYAKCG I AR LF+ M +K +WN +I+G+ ++G+ +EAL +F M+ G P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
+T + VL AC+H GLV EG F +M +G P ++HY CMVD+LGRAG L A I
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
+ M + + + L AC KD + A V + +++ + G +VLL N+++ ++ +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 551 DVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
V+ K R K ++IE+ F +GD H ++ I L +L M+
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 214/477 (44%), Gaps = 32/477 (6%)
Query: 26 KSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFD 85
K +I+ L Q HA ++ + N+++LL K ++R + + +AR F
Sbjct: 28 KRSTSISHLAQTHAQIILHGFRNDISLLTKL-----------TQRLSDLGAIYYARDIFL 76
Query: 86 ATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKG 145
+ + D FL N ++ ++F L + T KP T+ +
Sbjct: 77 SVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKST--------DLKPNSSTYAFAISA 128
Query: 146 CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSW 205
+ R G +HG AV +G +L + + +V MY KF + ARKVFD M E+ + W
Sbjct: 129 ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 206 TAVIVGYTRCGDMSEARKLF-DVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR 260
+I GY + E+ ++F D++ E D ++ +L + + +
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLAT 248
Query: 261 DKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALK 316
S T +S Y + G ++ +F + ++ +NAMI G+ N + +L
Sbjct: 249 KTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLS 308
Query: 317 LFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMY 376
LF+E+++S + TL+S++P G L L I G+ + VSTAL +Y
Sbjct: 309 LFKELMLSGA-RLRSSTLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 377 AKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
+K EI AR LF+E PEK SWNA+I+G+ NG ++A+ +F M + F PN +T+
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+LSAC G + G+ + I ++ + + G + EA L M
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 300/589 (50%), Gaps = 67/589 (11%)
Query: 24 QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
QC + K + + L A M++ S++ + L+ +FIT C S R + AVS + +
Sbjct: 782 QCSTPKLLESAL---AAMIKTSLNQDCRLMNQFITACTSF----KRLDLAVSTMTQMQ-- 832
Query: 84 FDATHKRDEFLCNSM----ITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
+ + F+ N++ +T IR + RD P +T+
Sbjct: 833 -----EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD-------------SVSPSSYTY 874
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++LVK + A+R G + K GF + + T L+D Y
Sbjct: 875 SSLVKASS--FASRFGESLQAHIWKFGFGFHVKIQTTLIDFY------------------ 914
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
+ G + EARK+FD MPERD A+ M+ Y ++ MD A L ++M
Sbjct: 915 -------------SATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM 961
Query: 260 RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFR 319
+KN + +++GY G++E A +F+ MP K++ +W MI G+ +NK+ EA+ +F
Sbjct: 962 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
+M M + P+EVT+ +V+ A A LG L++G + + + V + +AL+DMY+KC
Sbjct: 1022 KM-MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G + RA L+F +P+K WN++I G A +G A+EAL++F M E +PN +T + V
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVF 1140
Query: 440 SACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDAN 498
+AC H GLVDEGRR +++M + + I +EHYG MV L +AG + EA LI M F+ N
Sbjct: 1141 TACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN 1200
Query: 499 GIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHM 558
+I + L C K++ AE + + +E +G Y LL ++YA + RW DV +++
Sbjct: 1201 AVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR 1260
Query: 559 MKMRGSYKEV-ACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
M+ G K S I +D R F A D HS + + L L +++ M
Sbjct: 1261 MRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/386 (38%), Positives = 242/386 (62%), Gaps = 11/386 (2%)
Query: 233 VAAFNVMIDGYVKLGCMDM---------AQDLFDKMRDKNVISWTSMVSGYCQNGDVESA 283
V F + ID YV G +D+ AQ +FD+M +++++S T+M++ Y + G+VE+A
Sbjct: 152 VLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAA 211
Query: 284 RLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVAD 343
R +FD M E+++ +WN MI G+ ++ P++AL LF+++L +P+E+T+++ L A +
Sbjct: 212 RALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQ 271
Query: 344 LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNAL 403
+GAL+ G WI F + ++ +V+V T LIDMY+KCG + A L+F + P K+ +WNA+
Sbjct: 272 IGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAM 331
Query: 404 INGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGF 461
I G+A++G +++AL +F EM G +P +IT IG L AC H GLV+EG R F++M + +
Sbjct: 332 IAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEY 391
Query: 462 GIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERV 521
GI P+IEHYGC+V LLGRAG L A I+ M DA+ ++ SS L +C D + +
Sbjct: 392 GIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEI 451
Query: 522 LRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFRE 581
+ + + +G YVLL N+YA+ + V V+++MK +G KE S IE++ + E
Sbjct: 452 AEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHE 511
Query: 582 FVAGDYLHSNLEVIQLTLGQLWKHMK 607
F AGD HS + I L ++ + +K
Sbjct: 512 FRAGDREHSKSKEIYTMLRKISERIK 537
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 216/469 (46%), Gaps = 71/469 (15%)
Query: 5 SPPQRTLWSTAERKC-------LDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFI 57
S PQ L +TA + L +L KS+ ++ +LQIHA +LR+ NL L ++
Sbjct: 10 SLPQNQLSTTATARFRLPPPEKLAVLIDKSQ-SVDEVLQIHAAILRH----NLLLHPRY- 63
Query: 58 TTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRD 117
+ + R + +RH+ F T D FL + I T + F L+
Sbjct: 64 ---PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 120
Query: 118 LCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
L + P TF++L+K C+ T+ G +H +K G +D YVAT L
Sbjct: 121 LLS---------SEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGL 167
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN 237
VD+Y K G + SA+KVFD M ERS VS TA+I Y + G++ AR LFD M ERD+ ++N
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 238 VMIDGYVKLGCMDMAQDLFDKMRDK----------------------------------- 262
VMIDGY + G + A LF K+ +
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKS 287
Query: 263 -----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
NV T ++ Y + G +E A L+F+ P K++ WNAMI G+ + +AL+L
Sbjct: 288 SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRL 347
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMY 376
F EM ++P ++T + L A A G ++ G I + + + + L+ +
Sbjct: 348 FNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLL 407
Query: 377 AKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMI 424
+ G++ RA + M + ++ W++++ ++G E+ E +I
Sbjct: 408 GRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLI 456
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 291/576 (50%), Gaps = 53/576 (9%)
Query: 13 STAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNE 72
+ A CL LL S K + L QIH ++ VD + K I CA I++S +
Sbjct: 2 TIAIHHCLSLLN--SCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCA-ISISDA---- 54
Query: 73 AVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPF 132
+ +ARR + D F+ N+++ + + +F ++ R
Sbjct: 55 ----LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVF------- 103
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
P +F ++K + R G ++H A+K+G L+V T L+ MY
Sbjct: 104 -PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMY----------- 151
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMA 252
CG + ARK+FD M + ++ A+N +I + + A
Sbjct: 152 --------------------GGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGA 191
Query: 253 QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
+++FDKM +N SW M++GY + G++ESA+ +F MP ++ +W+ MI G N +
Sbjct: 192 REIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN 251
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
E+ FRE L A + PNEV+L VL A + G+ + G + GF + V V+ AL
Sbjct: 252 ESFLYFRE-LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 373 IDMYAKCGEIGRARLLFEEMPEKE-TASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
IDMY++CG + ARL+FE M EK SW ++I G A++G+ +EA+ +F M G P+
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
I+ I +L AC+H GL++EG F M+ + I P+IEHYGCMVDL GR+G L +A + I
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
MP I+ + L AC ++ AE+V + +++ +GD VLL N YAT +W
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 551 DVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
DV ++ M ++ K A S++EV +F AG+
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE 526
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/463 (36%), Positives = 256/463 (55%), Gaps = 14/463 (3%)
Query: 123 ATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYV 182
A +T F P TF + K C REG ++HG+ K GF D+YV +LV Y
Sbjct: 93 AYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFY- 151
Query: 183 KFGVLGSAR---KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP-ERDVAAFNV 238
GV G +R KVF EM R VSWT +I G+TR G EA F M E ++A +
Sbjct: 152 --GVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVC 209
Query: 239 MIDGYVKLGCMDMAQDLFDK-MRDKNVISW---TSMVSGYCQNGDVESARLMFDLMPEKN 294
++ ++GC+ + + + ++ ++IS +++ Y + + A +F + +K+
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKD 269
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+WN+MI G ++ EA+ LF M S+ ++P+ L SVL A A LGA+D G W+
Sbjct: 270 KVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVH 329
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
+ + + TA++DMYAKCG I A +F + K +WNAL+ G A++G
Sbjct: 330 EYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGL 389
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG--FGIAPQIEHYGC 472
E+L FE M++ GF+PN +T + L+AC H GLVDEGRR F M+ + + P++EHYGC
Sbjct: 390 ESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC 449
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAER-VLRETVKMEKE 531
M+DLL RAG LDEA L++ MP + I + L AC + + + +L + +E E
Sbjct: 450 MIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFE 509
Query: 532 CAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIE 574
+G YVLL N++A +RW DV ++ +MK++G K S IE
Sbjct: 510 DSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 45/274 (16%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A R F K+D+ NSMI+ + E LF + T + KP GH
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF--------SLMQTSSGIKPDGHIL 309
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
T+++ C + A G VH + G D ++ TA+VDMY K G + +A ++F+ +
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRS 369
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
++ +W A++ G G E+ + F+ M VKLG
Sbjct: 370 KNVFTWNALLGGLAIHGHGLESLRYFEEM---------------VKLGF----------- 403
Query: 260 RDKNVISWTSMVSGYCQNGDVESARLMFDLMP--EKNLFT----WNAMIGGHCKNKQPHE 313
N++++ + ++ C G V+ R F M E NLF + MI C+ E
Sbjct: 404 -KPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDE 462
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
AL+L + M V+P+ ++L A + G L
Sbjct: 463 ALELVKAM----PVKPDVRICGAILSACKNRGTL 492
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/479 (35%), Positives = 269/479 (56%), Gaps = 24/479 (5%)
Query: 147 TACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS---ARKVFDEMSERSRV 203
+ C + RE +++ A+K+ D+ L++ + S AR +F+ MSE V
Sbjct: 37 SKCNSLRELMQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIV 95
Query: 204 SWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK-------------LGCMD 250
+ ++ GY+R + E LF + E + N +K L C+
Sbjct: 96 IFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLS 155
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
M L D NV ++++ Y + DV+SAR +FD + E + +NAMI G+ + +
Sbjct: 156 MKLGL-----DDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
P+EAL LFREM ++PNE+TLLSVL + A LG+LDLG WI +A++ V+V+T
Sbjct: 211 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNT 269
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
ALIDM+AKCG + A +FE+M K+T +W+A+I +A +G+A++++ +FE M E +P
Sbjct: 270 ALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQP 329
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+EIT +G+L+AC+H G V+EGR+ F M FGI P I+HYG MVDLL RAG L++A
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEF 389
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
I +P ++ L AC ++ AE+V +++ GDYV+L NLYA K+W
Sbjct: 390 IDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKW 449
Query: 550 TDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
V+ ++ +MK R + K CS IEV+ EF +GD + S + L ++ K +K+
Sbjct: 450 EYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 185/385 (48%), Gaps = 29/385 (7%)
Query: 30 TITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHK 89
++ L+QI A+ +++ +++ ++ +AK I C +S + +AR F+A +
Sbjct: 41 SLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESS--------MSYARHLFEAMSE 91
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
D + NSM + E F+LF ++ P +TF +L+K C
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL---------PDNYTFPSLLKACAVA 142
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
A EG ++H +++K G ++YV L++MY + + SAR VFD + E V + A+I
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202
Query: 210 VGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMDMAQDLFDKMRDKNVI 265
GY R +EA LF M + + + + + LG +D+ + + + +
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 266 SW----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
+ T+++ + + G ++ A +F+ M K+ W+AMI + + + +++ +F E
Sbjct: 263 KYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF-ER 321
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
+ S +V+P+E+T L +L A + G ++ G + + + S++ +++D+ ++ G
Sbjct: 322 MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAG 381
Query: 381 EIGRARLLFEEMPEKETAS-WNALI 404
+ A +++P T W L+
Sbjct: 382 NLEDAYEFIDKLPISPTPMLWRILL 406
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 307/625 (49%), Gaps = 67/625 (10%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVR 78
L C + +QIH +++ +L N L F C +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL--------------D 186
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFS-EPFTLFRDLCRGTATRTMTMTPFKPGGH 137
AR+ FD +R+ SMI +A R F+ + LF + R P
Sbjct: 187 SARKVFDEMSERNVVSWTSMICG-YARRDFAKDAVDLFFRMVRDEEV--------TPNSV 237
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T ++ C G +V+ +G ++ + +ALVDMY+K + A+++FDE
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PERD--VAAF------------- 236
+ A+ Y R G EA +F++M P+R ++A
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 237 ------------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
N +ID Y+K D A +FD+M +K V++W S+V+GY +NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
+V++A F+ MPEKN+ +WN +I G + EA+++F M V + VT++S+
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
A LGALDL WI + + + VR+ T L+DM+++CG+ A +F + ++ +
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
+W A I A+ G A+ A+E+F+ MI +G +P+ + +G L+AC+H GLV +G+ F +M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 459 -EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR 517
+ G++P+ HYGCMVDLLGRAG L+EA LI+ MP + N +I +S L AC +V
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 518 AERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDG 577
A + + E G YVLL N+YA+ RW D+ V+ MK +G K S I++ G
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 578 RFREFVAGDYLHSNLEVIQLTLGQL 602
+ EF +GD H + I+ L ++
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 229/510 (44%), Gaps = 60/510 (11%)
Query: 26 KSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFD 85
K+ KTI L H + + +DN+++ + K + + S + A+ F+
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRES--------LSFAKEVFE 91
Query: 86 ATHKRDE-FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
+ F+ NS+I + + +E LF M + P +TF +
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFL---------RMMNSGISPDKYTFPFGLS 142
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
C A G+++HG+ VK G+ DL+V +LV Y + G L SARKVFDEMSER+ VS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN-----VMIDGYVKLGCMDMAQDLFDKM 259
WT++I GY R +A LF M + N +I KL ++ + ++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 260 RDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
R+ N + +++V Y + ++ A+ +FD NL NAM + + EAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+F ++M + V P+ +++LS + + + L + G G+ R + + ALIDM
Sbjct: 323 GVFN-LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 376 YAKC-------------------------------GEIGRARLLFEEMPEKETASWNALI 404
Y KC GE+ A FE MPEK SWN +I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 405 NGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
+G +EA+EVF M +EG + +TM+ + SAC H G +D + + +E GI
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI 501
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ +VD+ R G + A ++ ++
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 191/625 (30%), Positives = 307/625 (49%), Gaps = 67/625 (10%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVR 78
L C + +QIH +++ +L N L F C +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGEL--------------D 186
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFS-EPFTLFRDLCRGTATRTMTMTPFKPGGH 137
AR+ FD +R+ SMI +A R F+ + LF + R P
Sbjct: 187 SARKVFDEMSERNVVSWTSMICG-YARRDFAKDAVDLFFRMVRDEEV--------TPNSV 237
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T ++ C G +V+ +G ++ + +ALVDMY+K + A+++FDE
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PERD--VAAF------------- 236
+ A+ Y R G EA +F++M P+R ++A
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 237 ------------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
N +ID Y+K D A +FD+M +K V++W S+V+GY +NG
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
+V++A F+ MPEKN+ +WN +I G + EA+++F M V + VT++S+
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
A LGALDL WI + + + VR+ T L+DM+++CG+ A +F + ++ +
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVS 537
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
+W A I A+ G A+ A+E+F+ MI +G +P+ + +G L+AC+H GLV +G+ F +M
Sbjct: 538 AWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSM 597
Query: 459 -EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR 517
+ G++P+ HYGCMVDLLGRAG L+EA LI+ MP + N +I +S L AC +V
Sbjct: 598 LKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEM 657
Query: 518 AERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDG 577
A + + E G YVLL N+YA+ RW D+ V+ MK +G K S I++ G
Sbjct: 658 AAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRG 717
Query: 578 RFREFVAGDYLHSNLEVIQLTLGQL 602
+ EF +GD H + I+ L ++
Sbjct: 718 KTHEFTSGDESHPEMPNIEAMLDEV 742
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 229/510 (44%), Gaps = 60/510 (11%)
Query: 26 KSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFD 85
K+ KTI L H + + +DN+++ + K + + S + A+ F+
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRES--------LSFAKEVFE 91
Query: 86 ATHKRDE-FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
+ F+ NS+I + + +E LF M + P +TF +
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFL---------RMMNSGISPDKYTFPFGLS 142
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
C A G+++HG+ VK G+ DL+V +LV Y + G L SARKVFDEMSER+ VS
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVS 202
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN-----VMIDGYVKLGCMDMAQDLFDKM 259
WT++I GY R +A LF M + N +I KL ++ + ++ +
Sbjct: 203 WTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Query: 260 RDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
R+ N + +++V Y + ++ A+ +FD NL NAM + + EAL
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREAL 322
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+F ++M + V P+ +++LS + + + L + G G+ R + + ALIDM
Sbjct: 323 GVF-NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 376 YAKC-------------------------------GEIGRARLLFEEMPEKETASWNALI 404
Y KC GE+ A FE MPEK SWN +I
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 405 NGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
+G +EA+EVF M +EG + +TM+ + SAC H G +D + + +E GI
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI 501
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ +VD+ R G + A ++ ++
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/454 (35%), Positives = 264/454 (58%), Gaps = 15/454 (3%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM- 228
++Y+ TA++D +V G ++ M S + VI + D+ R++ +
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 229 -----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESA 283
R V M++ Y K G + A+ +FD+M D++ ++ T M++ Y + G ++ A
Sbjct: 151 KLGFGSSRSVGL--KMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 284 RLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVAD 343
+F + K+ W AMI G +NK+ ++AL+LFREM M +V NE T + VL A +D
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSACSD 267
Query: 344 LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNAL 403
LGAL+LG W+ F ++++ S V ALI+MY++CG+I AR +F M +K+ S+N +
Sbjct: 268 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 327
Query: 404 INGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FG 462
I+G A++G + EA+ F M+ GFRPN++T++ +L+AC+H GL+D G F +M+ F
Sbjct: 328 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFN 387
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVL 522
+ PQIEHYGC+VDLLGR G L+EA I+ +P + + I+L + L AC ++ E++
Sbjct: 388 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 447
Query: 523 RETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREF 582
+ + E +G YVLL NLYA+ +W + +++ M+ G KE CS IEVD + EF
Sbjct: 448 KRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEF 507
Query: 583 VAGDYLHSNLEVIQLTLGQL-----WKHMKVEII 611
+ GD H + E I L +L +K +++II
Sbjct: 508 LVGDIAHPHKEAIYQRLQELNRILRFKENQIDII 541
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/571 (31%), Positives = 297/571 (52%), Gaps = 36/571 (6%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L Q ++ +++ L Q+H M+++SV N+ L++ I C + + + + +AR
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMN--------LSYAR 61
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
F++ ++ NSMI + + ++++ R + P TF
Sbjct: 62 SVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR---------KGYSPDYFTFPY 112
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++K C+ + G VHG VK GF +++YV+T L+ MY+ G + +VF+++ + +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF-NVMIDGYVKLG-CMDMA------- 252
V+W ++I G+ S+A + F M V A +M+D V G C D+
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 253 -------QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
F NVI TS++ Y + GD+ +AR +FD MPE+ L +WN++I G+
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+N EAL +F +ML + P++VT LSV+ A G LG I + +
Sbjct: 293 SQNGDAEEALCMFLDML-DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD 351
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+ AL++MYAK G+ A+ FE++ +K+T +W +I G A +G EAL +F+ M
Sbjct: 352 AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 426 EG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQIEHYGCMVDLLGRAGCL 483
+G P+ IT +GVL AC+H GLV+EG+R F M G+ P +EHYGCMVD+L RAG
Sbjct: 412 KGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRF 471
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
+EAE L++TMP N I + L C +++ +R+ + E+ +G YVLL N+Y
Sbjct: 472 EEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIY 531
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIE 574
A RW DV+ ++ MK + K + S +E
Sbjct: 532 AKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 175/506 (34%), Positives = 272/506 (53%), Gaps = 21/506 (4%)
Query: 108 FSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGF 167
FSE +L+R + R ++ P +F ++K C + G ++H K G
Sbjct: 34 FSESISLYRSMLRSGSS---------PDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 168 CLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS--WTAVIVGYTRCGDMSEARKLF 225
+ +V TAL+ MY K G++ ARKVF+E + S++S + A+I GYT +++A +F
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMF 144
Query: 226 DVMPERDVAAFNVMIDGYVKLGCMD----MAQDLFDKM----RDKNVISWTSMVSGYCQN 277
M E V+ +V + G V L + + + L + D V S ++ Y +
Sbjct: 145 RRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC 204
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G VE+ R +FD MP K L TWNA+I G+ +N ++ L+L+ +M S+ V P+ TL+SV
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSSGVCPDPFTLVSV 263
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
L + A LGA +G + +V VS A I MYA+CG + +AR +F+ MP K
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SW A+I + ++G + L +F+ MI+ G RP+ + VLSAC+H GL D+G F+A
Sbjct: 324 VSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRA 383
Query: 458 ME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS 516
M+ + + P EHY C+VDLLGRAG LDEA I++MP + +G + + L AC K+V
Sbjct: 384 MKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVD 443
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVD 576
AE + ++ E G YVL+ N+Y+ K + ++ MM+ R K+ S +E
Sbjct: 444 MAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHK 503
Query: 577 GRFREFVAGDYLHSNLEVIQLTLGQL 602
GR F+AGD H E + L +L
Sbjct: 504 GRVHLFLAGDRSHEQTEEVHRMLDEL 529
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 296/575 (51%), Gaps = 62/575 (10%)
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTAL 142
F + T + F+ N+MI+ + + +E F L+ + R + P TF L
Sbjct: 91 FLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMIRHRVS---------PDRQTFLYL 139
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDL--YVATALVDMYVKFGVLGSARKVFDEMSER 200
+K + ++ +H + +G CL L Y+ +LV Y++ G G A KVF M
Sbjct: 140 MKASSFLSEVKQ---IHCHIIVSG-CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP 195
Query: 201 SRVSWTAVIVGYTRCGDMSEARKLF--------------------------DVMPERDVA 234
S+ +IVGY + G EA KL+ D+ + V
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVH 255
Query: 235 AF---------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGD 279
+ N ++D Y K +A+ FD M+ K++ SW +MV G+ + GD
Sbjct: 256 GWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGD 315
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALK-LFREMLMSASVEPNEVTLLSVL 338
+E+A+ +FD MP+++L +WN+++ G+ K ++ LF EM + V+P+ VT++S++
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
A+ G L G W+ G R +L G +S+ALIDMY KCG I RA ++F+ EK+ A
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVA 435
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
W ++I G A +G ++AL++F M EG PN +T++ VL+AC+H GLV+EG F M
Sbjct: 436 LWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHM 495
Query: 459 -EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ-TMPFDANGIILSSFLFACGHFKDVS 516
+ FG P+ EHYG +VDLL RAG ++EA++++Q MP + + S L AC +D+
Sbjct: 496 KDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIE 555
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVA-CSVIEV 575
AE L E +K+E E G YVLL N+YAT RW + + M+ RG K SV+ V
Sbjct: 556 TAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGV 615
Query: 576 DGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEI 610
+G R A H I+ L L+ MK ++
Sbjct: 616 EGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKL 650
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 34/193 (17%)
Query: 274 YCQNGDVESARLMF-DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
Y +N D+ A+L+F + P N+F +N MI +K +E L+ M+ V P+
Sbjct: 80 YPENLDL--AKLLFLNFTPNPNVFVYNTMISAVSSSK--NECFGLYSSMI-RHRVSPDRQ 134
Query: 333 TLLSVLPAVADL-------------GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
T L ++ A + L G L LG ++ +L+ Y +
Sbjct: 135 TFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLW---------------NSLVKFYMEL 179
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G G A +F MP + +S+N +I G+A G + EAL+++ M+ +G P+E T++ +L
Sbjct: 180 GNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL 239
Query: 440 SACNHCGLVDEGR 452
C H + G+
Sbjct: 240 VCCGHLSDIRLGK 252
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 33/238 (13%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-----RDLC-----------RGTA 123
A+R FDA K+D N+M+ + +F RDL +G
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 124 TRT-------MTMT-PFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVAT 175
RT MT+ KP T +L+ G G VHG+ ++ D ++++
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 176 ALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAA 235
AL+DMY K G++ A VF +E+ WT++I G G+ +A +LF M E V
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 236 FNVMIDGYVKL----GCMDMAQDLFDKMRDK-----NVISWTSMVSGYCQNGDVESAR 284
NV + + G ++ +F+ M+DK + S+V C+ G VE A+
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAK 525
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/492 (33%), Positives = 248/492 (50%), Gaps = 46/492 (9%)
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF---GVLGSARKVFDEMSERSRVSW 205
C E ++H +K G D Y T + + L A+ VFD W
Sbjct: 24 CSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLW 83
Query: 206 TAVIVGYTRCGDMSE------ARKLFDVMP------------------------------ 229
+I G++ C D E R L P
Sbjct: 84 NLMIRGFS-CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 230 ----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARL 285
E DV A N +I+ Y G +A LFD++ + + +SW S++ GY + G ++ A
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
+F M EKN +W MI G+ + EAL+LF EM ++ VEP+ V+L + L A A LG
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-QNSDVEPDNVSLANALSACAQLG 261
Query: 346 ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALIN 405
AL+ G WI + + ++ + LIDMYAKCGE+ A +F+ + +K +W ALI+
Sbjct: 262 ALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALIS 321
Query: 406 GFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIA 464
G+A +G +EA+ F M + G +PN IT VL+AC++ GLV+EG+ F +ME + +
Sbjct: 322 GYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLK 381
Query: 465 PQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
P IEHYGC+VDLLGRAG LDEA+ IQ MP N +I + L AC K++ E +
Sbjct: 382 PTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 525 TVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVA 584
+ ++ G YV N++A +K+W + + +MK +G K CS I ++G EF+A
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLA 501
Query: 585 GDYLHSNLEVIQ 596
GD H +E IQ
Sbjct: 502 GDRSHPEIEKIQ 513
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 187/432 (43%), Gaps = 59/432 (13%)
Query: 34 LLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEF 93
L QIHA ML+ + + + KF++ C S STS + +A+ FD + D F
Sbjct: 30 LKQIHARMLKTGLMQDSYAITKFLSFCIS---STSS-----DFLPYAQIVFDGFDRPDTF 81
Query: 94 LCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
L N MI + L++ + +A +TF +L+K C+ A
Sbjct: 82 LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHN---------AYTFPSLLKACSNLSAFE 132
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
E ++H K G+ D+Y +L++ Y G A +FD + E VSW +VI GY
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 214 RCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTS 269
+ G M A LF M E++ ++ MI GYV+ A LF +M++ +V +S +
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 270 MVSG-----------------------------------YCQNGDVESARLMFDLMPEKN 294
+S Y + G++E A +F + +K+
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI- 353
+ W A+I G+ + EA+ F EM ++PN +T +VL A + G ++ G I
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEM-QKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGR 412
R L ++ ++D+ + G + A+ +EMP K A W AL+ ++
Sbjct: 372 YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKN 431
Query: 413 AKEALEVFEMMI 424
+ E+ E++I
Sbjct: 432 IELGEEIGEILI 443
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 47/331 (14%)
Query: 8 QRTLWSTAERKCLD----LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASI 63
QR L S+A L C + QIHA + + +N++ + I S
Sbjct: 104 QRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLIN---SY 160
Query: 64 AVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
AV+ + + A FD + D+ NS+I + + TLFR + A
Sbjct: 161 AVTGN--------FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNA 212
Query: 124 TRTMTM----------------------TPFKPGGHTFTALVKGCTACMATREGLEVHGV 161
TM + +P + + C A +G +H
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSY 272
Query: 162 AVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEA 221
K +D + L+DMY K G + A +VF + ++S +WTA+I GY G EA
Sbjct: 273 LNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREA 332
Query: 222 RKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKM-RDKN----VISWTSMVS 272
F M + +V F ++ G ++ + +F M RD N + + +V
Sbjct: 333 ISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVD 392
Query: 273 GYCQNGDVESARLMFDLMPEK-NLFTWNAMI 302
+ G ++ A+ MP K N W A++
Sbjct: 393 LLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 223/358 (62%), Gaps = 2/358 (0%)
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
+ DV N ++ Y G + A +F +M ++V+SWTSMV+GYC+ G VE+AR MFD
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDE 208
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
MP +NLFTW+ MI G+ KN +A+ LF E + V NE ++SV+ + A LGAL+
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLF-EFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G + + + ++ + TAL+DM+ +CG+I +A +FE +PE ++ SW+++I G AV
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIE 468
+G A +A+ F MI GF P ++T VLSAC+H GLV++G ++ M+ GI P++E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKM 528
HYGC+VD+LGRAG L EAEN I M N IL + L AC +K+ AERV +K+
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 529 EKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
+ E +G YVLL N+YA +W +E ++ MMK + K S+IE+DG+ +F GD
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 57/447 (12%)
Query: 20 LDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH 79
L LLQ S + + L IH F+LR + +++ + ++ + C V S N+ +++ +
Sbjct: 16 LALLQ--SCSSFSDLKIIHGFLLRTHLISDVFVASRLLALC----VDDSTFNKPTNLLGY 69
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A F + F+ N +I + S+ F + + + + P TF
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLK---------SRIWPDNITF 120
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
L+K + G + H V+ GF D+YV +LV MY G + +A ++F +M
Sbjct: 121 PFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGF 180
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
R VSWT+++ GY +CG + AR++FD MP R++ +++MI+GY K C + A DLF+ M
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 260 RDK---------------------------------------NVISWTSMVSGYCQNGDV 280
+ + N+I T++V + + GD+
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 281 ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
E A +F+ +PE + +W+++I G + H+A+ F +M+ S P +VT +VL A
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI-SLGFIPRDVTFTAVLSA 359
Query: 341 VADLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
+ G ++ G I + + ++ + ++DM + G++ A +M K A
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAP 419
Query: 400 -WNALINGFAVNGRAKEALEVFEMMIR 425
AL+ + + A V M+I+
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIK 446
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 32/240 (13%)
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
+F + NLF +N +I +P +A + +ML S + P+ +T ++ A +++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKS-RIWPDNITFPFLIKASSEME 131
Query: 346 ALDLGGWIQGFARRKKLDGSVRVSTALIDMYA---------------------------- 377
+ +G R V V +L+ MYA
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 378 ---KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
KCG + AR +F+EMP + +W+ +ING+A N ++A+++FE M REG NE
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
M+ V+S+C H G ++ G R ++ + + + +VD+ R G +++A ++ + +P
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 295/612 (48%), Gaps = 66/612 (10%)
Query: 3 DESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCAS 62
D+ PQ T++ + LD + I TL +H+ ++ + N +L K + AS
Sbjct: 34 DQKSPQETVFLLGQ--VLD-----TYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYAS 86
Query: 63 IAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGT 122
+ S AR+ FD +R+ + N MI ++ + E +F +C G
Sbjct: 87 LKDVAS-----------ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC-GC 134
Query: 123 ATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYV 182
R P +TF ++K C+ G ++HG A K G L+V LV MY
Sbjct: 135 NVR--------PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYG 186
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
K CG +SEAR + D M RDV ++N ++ G
Sbjct: 187 K-------------------------------CGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 243 YVKLGCMDMAQDLFDKM------RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
Y + D A ++ +M D ++ +V + MF M +K+L
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV 275
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WN MIG + KN P EA++L+ M + EP+ V++ SVLPA D AL LG I G+
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGY 334
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
RKKL ++ + ALIDMYAKCG + +AR +FE M ++ SW A+I+ + +GR +A
Sbjct: 335 IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDA 394
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVD 475
+ +F + G P+ I + L+AC+H GL++EGR CFK M + + I P++EH CMVD
Sbjct: 395 VALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVD 454
Query: 476 LLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGD 535
LLGRAG + EA IQ M + N + + L AC D + ++ E +G
Sbjct: 455 LLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGY 514
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
YVLL N+YA RW +V +++++MK +G K S +EV+ F+ GD H + I
Sbjct: 515 YVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEI 574
Query: 596 QLTLGQLWKHMK 607
L L K MK
Sbjct: 575 YRELDVLVKKMK 586
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/512 (34%), Positives = 272/512 (53%), Gaps = 19/512 (3%)
Query: 114 LFRDLCR----GTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCL 169
L + LC+ A R ++ P T+ L+ C + + L VH + NG
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQES-SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQ 110
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D ++AT L+ MY G + ARKVFD+ +R+ W A+ T G E L+ M
Sbjct: 111 DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMN 170
Query: 230 ----ERDVAAFNVMIDGYVKLGCM--------DMAQDLFDKMRDKNVISWTSMVSGYCQN 277
E D + ++ V C ++ L + +V T++V Y +
Sbjct: 171 RIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF 230
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM-SASVEPNEVTLLS 336
G V+ A +F MP +N+ +W+AMI + KN + EAL+ FREM+ + PN VT++S
Sbjct: 231 GCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVS 290
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
VL A A L AL+ G I G+ R+ LD + V +AL+ MY +CG++ + +F+ M +++
Sbjct: 291 VLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRD 350
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
SWN+LI+ + V+G K+A+++FE M+ G P +T + VL AC+H GLV+EG+R F+
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 457 AM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDV 515
M GI PQIEHY CMVDLLGRA LDEA ++Q M + + S L +C +V
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 516 SRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEV 575
AER R +E + AG+YVLL ++YA + W +V+ VK +++ RG K +EV
Sbjct: 471 ELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEV 530
Query: 576 DGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
+ FV+ D + +E I L +L + MK
Sbjct: 531 RRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 192/432 (44%), Gaps = 43/432 (9%)
Query: 1 MGDESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTC 60
+ ES P + + L +L C + +++ L++H +L N D + L K I
Sbjct: 69 LSQESSPSQQTYE------LLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMY 122
Query: 61 ASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCR 120
+ + V +AR+ FD T KR ++ N++ E L+ + R
Sbjct: 123 SDLGS-----------VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 121 GTATRTMTMTPFKPGGHTFTALVKGCTACMAT----REGLEVHGVAVKNGFCLDLYVATA 176
+ T+T ++K C A T +G E+H + G+ +Y+ T
Sbjct: 172 ---------IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAA 235
LVDMY +FG + A VF M R+ VSW+A+I Y + G EA + F ++M E ++
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 236 FNVMIDGYVKLGCMDMAQ---------DLFDKMRDKNVISWTSMVSGYCQNGDVESARLM 286
N + V C +A + + D + +++V+ Y + G +E + +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 287 FDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGA 346
FD M ++++ +WN++I + + +A+++F EML + + P VT +SVL A + G
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVSVLGACSHEGL 401
Query: 347 LDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM-PEKETASWNALI 404
++ G + + R + + ++D+ + + A + ++M E W +L+
Sbjct: 402 VEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL 461
Query: 405 NGFAVNGRAKEA 416
++G + A
Sbjct: 462 GSCRIHGNVELA 473
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 256/451 (56%), Gaps = 17/451 (3%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+T+ L+ CT A +G HG VK+G L + T+L+DMYVK G + +AR+VF+E
Sbjct: 243 YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGC-----MDM 251
S V WTA+IVGYT G ++EA LF M ++ N + V GC +++
Sbjct: 303 HSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP-NCVTIASVLSGCGLIENLEL 361
Query: 252 AQDLFD-----KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
+ + + D NV + ++V Y + A+ +F++ EK++ WN++I G
Sbjct: 362 GRSVHGLSIKVGIWDTNVAN--ALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFS 419
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL--DG 364
+N HEAL LF M S SV PN VT+ S+ A A LG+L +G + ++ +
Sbjct: 420 QNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASS 478
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
SV V TAL+D YAKCG+ ARL+F+ + EK T +W+A+I G+ G +LE+FE M+
Sbjct: 479 SVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEML 538
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCL 483
++ +PNE T +LSAC H G+V+EG++ F +M + + P +HY CMVD+L RAG L
Sbjct: 539 KKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGEL 598
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
++A ++I+ MP + +FL CG E V+++ + + + A YVL+ NLY
Sbjct: 599 EQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLY 658
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIE 574
A++ RW ++V+++MK RG K S +E
Sbjct: 659 ASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 156/316 (49%), Gaps = 14/316 (4%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
L+ CT + R+ HGV NG D+ +AT LV +Y FG AR VFD++ E
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDL-- 255
W ++ Y + E KL+D++ + D F+ + +L +D + +
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 256 -FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEA 314
K+ + + T ++ Y + G+++SA +F+ + +N+ W +MI G+ KN E
Sbjct: 167 QLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
L LF M +V NE T +++ A L AL G W G + ++ S + T+L+D
Sbjct: 227 LVLFNRM-RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
MY KCG+I AR +F E + W A+I G+ NG EAL +F+ M +PN +T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 435 MIGVLSACNHCGLVDE 450
+ VLS CGL++
Sbjct: 346 IASVLSG---CGLIEN 358
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 164/348 (47%), Gaps = 23/348 (6%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +ARR F+ D + +MI + +E +LF+ M KP
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQK---------MKGVEIKPNC 343
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +++ GC G VHG+++K G D VA ALV MY K A+ VF+
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNV----MIDGYVKLGCMDMA 252
SE+ V+W ++I G+++ G + EA LF M V V + LG + +
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 253 QDL------FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
L + +V T+++ Y + GD +SARL+FD + EKN TW+AMIGG+
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGS 365
K +L+LF EML +PNE T S+L A G ++ G + + S
Sbjct: 523 KQGDTIGSLELFEEMLKKQQ-KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGR 412
+ T ++DM A+ GE+ +A + E+MP + + + A ++G ++ R
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSR 629
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 54/100 (54%)
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
G L G + ++T L+ +Y G ARL+F+++PE + W ++ + +N +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
E +++++++++ GFR ++I L AC +D G++
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK 163
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 284/535 (53%), Gaps = 21/535 (3%)
Query: 77 VRHARRFFDATHKRDEFLC-NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+R AR FD R + +M++ + +Q S LF+++
Sbjct: 93 MREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----------- 141
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
++ ++ G + LE+ + ++ ++V V+ G + A +F+
Sbjct: 142 --SWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
M R VSWTA++ G + G + EAR+LFD MPER++ ++N MI GY + +D A L
Sbjct: 196 RMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQL 255
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
F M +++ SW +M++G+ +N ++ A +FD MPEKN+ +W MI G+ +NK+ EAL
Sbjct: 256 FQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEAL 315
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+F +ML SV+PN T +S+L A +DL L G I + + V++AL++M
Sbjct: 316 NVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNM 375
Query: 376 YAKCGEIGRARLLFEE--MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
Y+K GE+ AR +F+ + +++ SWN++I +A +G KEA+E++ M + GF+P+ +
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAMEGFGIAP-QIEHYGCMVDLLGRAGCLDEAENLIQT 492
T + +L AC+H GLV++G FK + P + EHY C+VDL GRAG L + N I
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC 495
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
+ + L AC +VS A+ V+++ ++ + AG YVL+ N+YA + +
Sbjct: 496 DDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEA 555
Query: 553 EDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
+++ MK +G K+ CS ++V + FV GD H E + L L M+
Sbjct: 556 AEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMR 610
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 14/257 (5%)
Query: 198 SERSRVSWTAVIVG-YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
S R RV ++G + G ++EARKLFD +PERDV + +I GY+KLG M A++LF
Sbjct: 41 SSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF 100
Query: 257 DKMRD-KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
D++ KNV++WT+MVSGY ++ + A ++F MPE+N+ +WN MI G+ ++ + +AL
Sbjct: 101 DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+LF EM E N V+ S++ A+ G +D + F R + D V TA++D
Sbjct: 161 ELFDEM-----PERNIVSWNSMVKALVQRGRIDEA--MNLFERMPRRD--VVSWTAMVDG 211
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
AK G++ AR LF+ MPE+ SWNA+I G+A N R EA ++F++M F +
Sbjct: 212 LAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMI 271
Query: 436 IGVL---SACNHCGLVD 449
G + CGL D
Sbjct: 272 TGFIRNREMNKACGLFD 288
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 86/227 (37%), Gaps = 82/227 (36%)
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
++ C+ G + AR +FD +PE+++ TW +I G+ K EA RE+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREA----RELFDRVDSRK 107
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
N VT W TA++ Y + ++ A +LF
Sbjct: 108 NVVT------------------W-----------------TAMVSGYLRSKQLSIAEMLF 132
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+EMPE+ SWN +I+G+A +G
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSG-------------------------------------- 154
Query: 450 EGRRCFKAMEGFGIAPQ--IEHYGCMVDLLGRAGCLDEAENLIQTMP 494
R KA+E F P+ I + MV L + G +DEA NL + MP
Sbjct: 155 ---RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 167/495 (33%), Positives = 273/495 (55%), Gaps = 12/495 (2%)
Query: 116 RDLCRG-TATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVA 174
RDL R A ++ T++ L+K C + A EG + NG +++
Sbjct: 40 RDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV 99
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
L++MYVKF +L A ++FD+M +R+ +SWT +I Y++C +A +L V+ RD
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL-VLMLRDNV 158
Query: 235 AFNVMIDGYVKLGCMDMAQ------DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFD 288
NV V C M+ + + + +V ++++ + + G+ E A +FD
Sbjct: 159 RPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFD 218
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
M + WN++IGG +N + AL+LF+ M + + + TL SVL A L L+
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLE 277
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
LG +Q K D + ++ AL+DMY KCG + A +F +M E++ +W+ +I+G A
Sbjct: 278 LG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQI 467
NG ++EAL++FE M G +PN IT++GVL AC+H GL+++G F++M+ +GI P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
EHYGCM+DLLG+AG LD+A L+ M + + + + L AC +++ AE ++ +
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 528 MEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDY 587
++ E AG Y LL N+YA ++W VE+++ M+ RG KE CS IEV+ + F+ GD
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDN 515
Query: 588 LHSNLEVIQLTLGQL 602
H + + L QL
Sbjct: 516 SHPQIVEVSKKLNQL 530
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/614 (30%), Positives = 304/614 (49%), Gaps = 51/614 (8%)
Query: 41 MLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMIT 100
ML +V+ + L +T C+++ + E + + + + + + F+ N+++
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMP-----EGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 101 TH---------------FAIRQFSEPFTLFRDLCRGTAT-------RTMTMTPFKPGGHT 138
+ F R T+ LC+ R M + +P T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLD--LYVATALVDMYVKFGVLGSARKVFDE 196
++++ C+ R G E+H A+KNG LD +V +ALVDMY + S R+VFD
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-----DVAAFNVMIDGYVKLGCMDM 251
M +R W A+I GY++ EA LF M E + ++ V+ G
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 252 AQDL----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
+ + + D++ +++ Y + G ++ A +F M +++L TWN MI G+
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 308 NKQPHEALKLFREM----------LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
++ +AL L +M S++PN +TL+++LP+ A L AL G I +A
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
+ L V V +AL+DMYAKCG + +R +F+++P+K +WN +I + ++G +EA+
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 603
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDL 476
++ MM+ +G +PNE+T I V +AC+H G+VDEG R F M+ +G+ P +HY C+VDL
Sbjct: 604 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 663
Query: 477 LGRAGCLDEAENLIQTMPFDANGI-ILSSFLFACGHFKDVSRAERVLRETVKMEKECAGD 535
LGRAG + EA L+ MP D N SS L A ++ E + +++E A
Sbjct: 664 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 723
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
YVLL N+Y++ W +V+ MK +G KE CS IE +FVAGD H E +
Sbjct: 724 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 783
Query: 596 QLTLGQLWKHMKVE 609
L LW+ M+ E
Sbjct: 784 SGYLETLWERMRKE 797
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 187/384 (48%), Gaps = 22/384 (5%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLD-LYVATALVDMYVKFG 185
M + KP + F AL+K G ++H K G+ +D + VA LV++Y K G
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK 245
G+ KVFD +SER++VSW ++I A + F M + +V + + V
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 246 L--------GCMDMAQDLFDKMRDKNVISW--TSMVSGYCQNGDVESARLMFDLMPEKNL 295
G M Q +R + S+ ++V+ Y + G + S++++ ++L
Sbjct: 208 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
TWN ++ C+N+Q EAL+ REM++ VEP+E T+ SVLPA + L L G +
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 356 FA-RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
+A + LD + V +AL+DMY C ++ R +F+ M +++ WNA+I G++ N K
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 415 EALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH---- 469
EAL +F M G N TM GV+ AC G +A+ GF + ++
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK----EAIHGFVVKRGLDRDRFV 442
Query: 470 YGCMVDLLGRAGCLDEAENLIQTM 493
++D+ R G +D A + M
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
W ++ ++ EA+ + +M++ ++P+ ++L AVADL ++LG I
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 358 RRKKLD-GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
+ SV V+ L+++Y KCG+ G +F+ + E+ SWN+LI+ + + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
LE F M+ E P+ T++ V++AC++ + EG K + +G+
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGL 229
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 267/503 (53%), Gaps = 23/503 (4%)
Query: 129 MTPFKPGGHTFTALVKGCTACMAT------REGLEVHGVAVKNGFCL-DLYVATALVDMY 181
M+PF +V+ C + T + ++H ++++G + D + L+
Sbjct: 1 MSPFSETSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYL 60
Query: 182 VKFGV---LGSARKVFDEMSERSRV-SWTAVIVGYTRCGDMSEARKLFDVM-----PERD 232
V + A KVF ++ + V W +I GY G+ A L+ M E D
Sbjct: 61 VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 233 VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKN----VISWTSMVSGYCQNGDVESARLMFD 288
+ +I + + + + + + + S++ Y GDV SA +FD
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
MPEK+L WN++I G +N +P EAL L+ EM S ++P+ T++S+L A A +GAL
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
LG + + + L ++ S L+D+YA+CG + A+ LF+EM +K + SW +LI G A
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 409 VNGRAKEALEVFEMM-IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQ 466
VNG KEA+E+F+ M EG P EIT +G+L AC+HCG+V EG F+ M E + I P+
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETV 526
IEH+GCMVDLL RAG + +A I++MP N +I + L AC D AE + +
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 527 KMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
++E +GDYVLL N+YA+E+RW+DV+ ++ M G K S++EV R EF+ GD
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 587 YLHSNLEVIQLTLGQLWKHMKVE 609
H + I L ++ ++ E
Sbjct: 480 KSHPQSDAIYAKLKEMTGRLRSE 502
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 189/437 (43%), Gaps = 90/437 (20%)
Query: 18 KCLDLLQCKSKKTITTLLQIHAFMLRNSVD-NNLNLLAKFITTCASIAVSTSRRNEAVSI 76
KC++LLQ +IT L QIHAF +R+ V ++ L I S+
Sbjct: 17 KCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPP-------- 68
Query: 77 VRHARRFFDATHKR-DEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+ +A + F K + F+ N++I + I F+L+R++ R + +P
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREM------RVSGLV--EPD 120
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
HT+ L+K T R G +H V +++GF +YV +L+ +Y G + SA KVFD
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PE------------------- 230
+M E+ V+W +VI G+ G EA L+ M P+
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 231 --------------RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ 276
R++ + NV++D Y + G ++ A+ LFD+M DKN +SWTS++ G
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
NG G EA++LF+ M + + P E+T +
Sbjct: 301 NG-----------------------FG--------KEAIELFKYMESTEGLLPCEITFVG 329
Query: 337 VLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-E 394
+L A + G + G + + K++ + ++D+ A+ G++ +A + MP +
Sbjct: 330 ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ 389
Query: 395 KETASWNALINGFAVNG 411
W L+ V+G
Sbjct: 390 PNVVIWRTLLGACTVHG 406
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 293/579 (50%), Gaps = 58/579 (10%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
K +L +HA +LR V ++ +A + +C+S+ S + ++SI R+ +
Sbjct: 40 KDTASLRHVHAQILRRGVLSSR--VAAQLVSCSSLLKSP---DYSLSIFRN-------SE 87
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
+R+ F+ N++I +F F + R KP TF ++K +
Sbjct: 88 ERNPFVLNALIRGLTENARFESSVRHFILMLR---------LGVKPDRLTFPFVLKSNSK 138
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVS 204
G +H +KN D +V +LVDMY K G L A +VF+E +R S +
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV 264
W +I GY R DM A LF MPER+ +++ +I GYV G ++ A+ LF+ M +KNV
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
+SWT++++G+ Q GD E+A + M EK L
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEMLEKGL----------------------------- 289
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGR 384
+PNE T+ +VL A + GAL G I G+ + + TAL+DMYAKCGE+
Sbjct: 290 ---KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 385 ARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
A +F M K+ SW A+I G+AV+GR +A++ F M+ G +P+E+ + VL+AC +
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 445 CGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILS 503
VD G F +M + I P ++HY +VDLLGRAG L+EA L++ MP + + +
Sbjct: 407 SSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 504 SFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRG 563
+ AC K RAE V + ++++ E G Y+ L +A++ DVE + ++ R
Sbjct: 467 ALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRI 526
Query: 564 SYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
+ + S IE+DG+ +F AGDY H + I L L ++
Sbjct: 527 KERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEI 565
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 188/567 (33%), Positives = 283/567 (49%), Gaps = 35/567 (6%)
Query: 34 LLQIHAFMLRNSVDNNLN--LLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRD 91
L QIH +L + + L++ + C + A R+ARR
Sbjct: 17 LKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQ----------FRYARRLLCQLQTLS 66
Query: 92 EFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMA 151
L +S+I FS TL R L A R M P HTF L+K +
Sbjct: 67 IQLWDSLIG------HFSGGITLNRRLS-FLAYRHMRRNGVIPSRHTFPPLLKAVFK-LR 118
Query: 152 TREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG 211
+ H VK G D +V +L+ Y G+ A ++FD ++ V+WTA+I G
Sbjct: 119 DSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDG 178
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL----------FDKMRD 261
+ R G SEA F M + VAA + + +K +D+ + R
Sbjct: 179 FVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAA--GKVEDVRFGRSVHGLYLETGRV 236
Query: 262 K-NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFRE 320
K +V +S+V Y + + A+ +FD MP +N+ TW A+I G+ +++ + + +F E
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEE 296
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
ML S V PNE TL SVL A A +GAL G + + + ++ + T LID+Y KCG
Sbjct: 297 MLKS-DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCG 355
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
+ A L+FE + EK +W A+INGFA +G A++A ++F M+ PNE+T + VLS
Sbjct: 356 CLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
Query: 441 ACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG 499
AC H GLV+EGRR F +M+G F + P+ +HY CMVDL GR G L+EA+ LI+ MP +
Sbjct: 416 ACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTN 475
Query: 500 IILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMM 559
++ + +C KD + +K++ +G Y LL NLY+ + W +V V+ M
Sbjct: 476 VVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQM 535
Query: 560 KMRGSYKEVACSVIEVDGRFREFVAGD 586
K + K S IEV G+ EF+A D
Sbjct: 536 KDQQVVKSPGFSWIEVKGKLCEFIAFD 562
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 260/492 (52%), Gaps = 12/492 (2%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M M + G H + AL+ C A R+G VH +K + Y+ T L+ Y K
Sbjct: 43 MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDG 242
L ARKV DEM E++ VSWTA+I Y++ G SEA +F M D F ++
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 243 YVKLGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTW 298
++ + + + + + D ++ +S++ Y + G ++ AR +F+ +PE+++ +
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
A+I G+ + EAL++F L S + PN VT S+L A++ L LD G
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHR-LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALE 418
R++L + +LIDMY+KCG + AR LF+ MPE+ SWNA++ G++ +G +E LE
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341
Query: 419 VFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG--FGIAPQIEHYGCMVD 475
+F +M E +P+ +T++ VLS C+H + D G F M +G P EHYGC+VD
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
Query: 476 LLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGD 535
+LGRAG +DEA I+ MP +L S L AC V E V R +++E E AG+
Sbjct: 402 MLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGN 461
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
YV+L NLYA+ RW DV +V+ MM + KE S I+ + F A D H E +
Sbjct: 462 YVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 521
Query: 596 QLTLGQLWKHMK 607
+ ++ MK
Sbjct: 522 LAKMKEISIKMK 533
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 25/332 (7%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ D +++ +MI+ + SE T+F ++ R KP TF
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG---------KPNEFTF 156
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++ C G ++HG+ VK + ++V ++L+DMY K G + AR++F+ + E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDL 255
R VS TA+I GY + G EA ++F + + + ++ L +D +
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 256 FDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ + + + S++ Y + G++ AR +FD MPE+ +WNAM+ G+ K+
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVA-----DLGALDLGGWIQGFARRKKLDGSV 366
E L+LFR M V+P+ VTLL+VL + D G G + G K
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKP---GT 393
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
++DM + G I A + MP K TA
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 227/384 (59%), Gaps = 2/384 (0%)
Query: 229 PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFD 288
P V N +ID Y+K + A +FD+M +++VISW S++SGY + G ++ A+ +F
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
LM +K + +W AMI G+ EA+ FREM + A +EP+E++L+SVLP+ A LG+L+
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL-AGIEPDEISLISVLPSCAQLGSLE 258
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
LG WI +A R+ V ALI+MY+KCG I +A LF +M K+ SW+ +I+G+A
Sbjct: 259 LGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYA 318
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQI 467
+G A A+E F M R +PN IT +G+LSAC+H G+ EG R F M + + I P+I
Sbjct: 319 YHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKI 378
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
EHYGC++D+L RAG L+ A + +TMP + I S L +C ++ A + V+
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Query: 528 MEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDY 587
+E E G+YVLL N+YA +W DV ++ M++ K S+IEV+ +EFV+GD
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDN 498
Query: 588 LHSNLEVIQLTLGQLWKHMKVEII 611
I + L H ++I
Sbjct: 499 SKPFWTEISIVLQLFTSHQDQDVI 522
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 177/387 (45%), Gaps = 50/387 (12%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
+A R F+ + FL NS+I + + + +++ L R + P T
Sbjct: 60 YATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFEL--------PDRFT 111
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
F + K C + + G +VHG K G + AL+DMY+KF L A KVFDEM
Sbjct: 112 FPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMY 171
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK 258
ER +SW +++ GY R G M +A+ LF +M ++ + ++ MI GY +GC A D F +
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 259 MR-------DKNVIS---------------W-----------------TSMVSGYCQNGD 279
M+ + ++IS W +++ Y + G
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
+ A +F M K++ +W+ MI G+ + H A++ F EM A V+PN +T L +L
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEM-QRAKVKPNGITFLGLLS 350
Query: 340 AVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-ET 397
A + +G G + + +++ + LID+ A+ G++ RA + + MP K ++
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMI 424
W +L++ G AL + ++
Sbjct: 411 KIWGSLLSSCRTPGNLDVALVAMDHLV 437
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 260/518 (50%), Gaps = 42/518 (8%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
KP T+ L++ C+ A EG +VH +GF + + L+ MY K G L ARK
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMA 252
VFDEM R SW ++ GY G + EARKLFD M E+D ++ M+ GYVK + A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 253 QDLFDKMR----------------------------------------DKNVISWTSMVS 272
L+ M+ D + + W+S++
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 273 GYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
Y + G ++ AR +FD + EK++ +W +MI + K+ + E LF E++ S PNE
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEY 320
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM 392
T VL A ADL +LG + G+ R D S++L+DMY KCG I A+ + +
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 393 PEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGR 452
P+ + SW +LI G A NG+ EAL+ F+++++ G +P+ +T + VLSAC H GLV++G
Sbjct: 381 PKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL 440
Query: 453 RCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGH 511
F ++ E ++ +HY C+VDLL R+G ++ +++I MP + + +S L C
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 512 FKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
+ ++ AE +E K+E E YV + N+YA +W + ++ M+ G K S
Sbjct: 501 YGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSS 560
Query: 572 VIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
E+ + F+A D H I L +L K MK E
Sbjct: 561 WTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEE 598
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 191/401 (47%), Gaps = 22/401 (5%)
Query: 74 VSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFK 133
V ++ AR+ FD ++D + +M+T + Q E L+ + R +R
Sbjct: 164 VGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSR-------- 215
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T + V A R G E+HG V+ G D + ++L+DMY K G + AR +
Sbjct: 216 PNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNI 275
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP---ER-DVAAFNVMIDGYVKLGCM 249
FD++ E+ VSWT++I Y + E LF + ER + F +++ L
Sbjct: 276 FDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE 335
Query: 250 DMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
++ + + M D + +S+V Y + G++ESA+ + D P+ +L +W ++IGG
Sbjct: 336 ELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGC 395
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDG 364
+N QP EALK F ++L+ + +P+ VT ++VL A G ++ G + + +L
Sbjct: 396 AQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMM 423
+ T L+D+ A+ G + + + EMP K + W +++ G + G A E + +
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 424 IREGFRP-NEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
+ P N +T + + + G +E + K M+ G+
Sbjct: 515 FK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 111/270 (41%), Gaps = 45/270 (16%)
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG-----HCKNKQPHEAL------KL 317
+ + G+ ++ S +K F N GG C+ + EA+ KL
Sbjct: 10 TTLHGFILKRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKL 69
Query: 318 FRE--MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
RE L+ + +P T +++ + AL+ G + R + + L+ M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE--------- 426
YAKCG + AR +F+EMP ++ SWN ++NG+A G +EA ++F+ M +
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 427 -GF----------------------RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
G+ RPN T+ ++A + G+ + G+
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ ++D+ G+ GC+DEA N+ +
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 188/601 (31%), Positives = 297/601 (49%), Gaps = 40/601 (6%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVR 78
L C + + Q H+ +++ + NL N L C ++
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL--------------E 480
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
AR+ F+ RD N++I ++ SE F LF+ M + G
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK---------RMNLCGIVSDGAC 531
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+ +K CT +G +VH ++VK G DL+ ++L+DMY K G++ ARKVF +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDMAQD 254
E S VS A+I GY++ ++ EA LF M R V F +++ K + +
Sbjct: 592 EWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 255 LFDKMRDKNVIS-----WTSMVSGYCQN-GDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
++ + S S++ Y + G E+ L +L K++ W M+ GH +N
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
EALK ++EM V P++ T ++VL + L +L G I D
Sbjct: 711 GFYEEALKFYKEMRHDG-VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETA-SWNALINGFAVNGRAKEALEVFEMMIREG 427
S LIDMYAKCG++ + +F+EM + SWN+LING+A NG A++AL++F+ M +
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEA 486
P+EIT +GVL+AC+H G V +GR+ F+ M G +GI +++H CMVDLLGR G L EA
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 487 ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
++ I+ + + SS L AC D R E + +++E + + YVLL N+YA++
Sbjct: 890 DDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQ 949
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
W ++ +M+ RG K S I+V+ R F AGD HS + I++ L L+ M
Sbjct: 950 GCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLM 1009
Query: 607 K 607
K
Sbjct: 1010 K 1010
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 208/492 (42%), Gaps = 85/492 (17%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +A + FD K D NSM++ + +I +P + R ++ P
Sbjct: 111 VSYAEKQFDFLEK-DVTAWNSMLSMYSSI---GKPGKVLRSFV------SLFENQIFPNK 160
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
TF+ ++ C G ++H +K G + Y ALVDMY K + AR+VF+
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW 220
Query: 197 MSERSRVSWTAVIVGYT-----------------------------------RCGDMSEA 221
+ + + V WT + GY R G + +A
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDA 280
Query: 222 RKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK------------------- 262
R LF M DV A+NVMI G+ K GC +A + F MR
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 263 --------------------NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
N+ +S+VS Y + +E+A +F+ + EKN WNAMI
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
G+ N + H+ ++LF +M S+ ++ T S+L A L++G +KKL
Sbjct: 401 RGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
++ V AL+DMYAKCG + AR +FE M +++ +WN +I + + EA ++F+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGC 482
M G + + L AC H + +G++ G+ + ++D+ + G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 483 LDEAENLIQTMP 494
+ +A + ++P
Sbjct: 580 IKDARKVFSSLP 591
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 175/418 (41%), Gaps = 76/418 (18%)
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
+A R G VH ++ G + + A+VD+Y K + A K FD + E+ +W +++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 210 VGYTRCGDMSEARKLF------DVMP---------------------------------E 230
Y+ G + + F + P E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 231 RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN------------- 277
R+ ++D Y K + A+ +F+ + D N + WT + SGY +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 278 ----------------------GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
G ++ ARL+F M ++ WN MI GH K A+
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAI 312
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+ F M S SV+ TL SVL A+ + LDLG + A + L ++ V ++L+ M
Sbjct: 313 EYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
Y+KC ++ A +FE + EK WNA+I G+A NG + + +E+F M G+ ++ T
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 436 IGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+LS C ++ G + + +A + +VD+ + G L++A + + M
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 15/263 (5%)
Query: 220 EARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGD 279
++RK+FD MP+R A +++G ++ L + + + ++V Y +
Sbjct: 60 KSRKVFDEMPQRLALA--------LRIGKAVHSKSLILGIDSEGRLG-NAIVDLYAKCAQ 110
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
V A FD + EK++ WN+M+ + +P + L+ F L + PN+ T VL
Sbjct: 111 VSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVS-LFENQIFPNKFTFSIVLS 168
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
A ++ G I + L+ + AL+DMYAKC I AR +FE + + T
Sbjct: 169 TCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVC 228
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
W L +G+ G +EA+ VFE M EG RP+ + + V++ G + + R F M
Sbjct: 229 WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS 288
Query: 460 GFGIAPQIEHYGCMVDLLGRAGC 482
+P + + M+ G+ GC
Sbjct: 289 ----SPDVVAWNVMISGHGKRGC 307
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 269/558 (48%), Gaps = 45/558 (8%)
Query: 52 LLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEP 111
+ K + +C+S+ + V AR FD +R+ +MI +F F +
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVD----ARSLFDRMTERNVITWTAMIDGYFKAGFFEDG 258
Query: 112 FTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDL 171
F LF R K +T + K C + REG ++HG+ + DL
Sbjct: 259 FGLF--------LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 172 YVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER 231
++ +L+ MY K G +G EA+ +F VM +
Sbjct: 311 FLGNSLMSMYSKLGYMG-------------------------------EAKAVFGVMKNK 339
Query: 232 DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMP 291
D ++N +I G V+ + A +LF+KM K+++SWT M+ G+ G++ +F +MP
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMP 399
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
EK+ TW AMI N EAL F +ML V PN T SVL A A L L G
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKML-QKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNG 411
I G + + + V +L+ MY KCG A +F + E S+N +I+G++ NG
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHY 470
K+AL++F M+ G PN +T + +LSAC H G VD G + FK+M+ + I P +HY
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY 578
Query: 471 GCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK 530
CMVDLLGR+G LD+A NLI TMP + + S L A V AE ++ +++E
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Query: 531 ECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHS 590
+ A YV+L LY+ + D + + ++ K + K+ S I + G F+AGD
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 591 NLEVIQLTLGQLWKHMKV 608
NLE I TL + K M++
Sbjct: 699 NLEEIGFTLKMIRKEMEL 716
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 201/463 (43%), Gaps = 38/463 (8%)
Query: 76 IVRHARRFFDATHKRDE-FLCNSMITTHFAIRQFSEPFTLFRDLC-RGTATRTMTMTPFK 133
I + R F + T F CNS I+ H E +FR + R + ++ +
Sbjct: 33 ITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYA 92
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV-LGSARK 192
G A + + V V + A++ +K LG A +
Sbjct: 93 ENGKMSKAW-----------QVFDEMPVRVTTSY-------NAMITAMIKNKCDLGKAYE 134
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE--RDVAAFNVMIDGYVKLGCMD 250
+F ++ E++ VS+ +I G+ R G EA L+ P RD A NV++ GY++ G +
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
A +F M K V+S +SMV GYC+ G + AR +FD M E+N+ TW AMI G+ K
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
+ LF M V+ N TL + A D G I G R L+ + +
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
+L+ MY+K G +G A+ +F M K++ SWN+LI G + EA E+FE M +
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK---- 370
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH--YGCMVDLLGRAGCLDEAEN 488
+ ++ ++ + G + K +E FG+ P+ ++ + M+ G +EA
Sbjct: 371 DMVSWTDMIKGFSGKGEIS------KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALC 424
Query: 489 LIQTM---PFDANGIILSSFLFACGHFKDVSRAERVLRETVKM 528
M N SS L A D+ ++ VKM
Sbjct: 425 WFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 149/357 (41%), Gaps = 80/357 (22%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D + L+ Y++ G A +VF M+ + VS ++++ GY + G + +AR LFD M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR---DKNVISWT------------------ 268
ER+V + MIDGY K G + LF +MR D V S T
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 269 -------------------SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
S++S Y + G + A+ +F +M K+ +WN++I G + K
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRK 355
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
Q EA +LF +M P + D+ W
Sbjct: 356 QISEAYELFEKM-------PGK----------------DMVSW----------------- 375
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
T +I ++ GEI + LF MPEK+ +W A+I+ F NG +EAL F M+++
Sbjct: 376 TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC 435
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
PN T VLSA + EG + + I + +V + + G ++A
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 284/584 (48%), Gaps = 29/584 (4%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+HAF ++ D N L + + V RR + ++ F+ ++D
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEV---RRLDLACVL------FEEIPEKDSVTF 218
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N++IT + ++E LF M + +P TF+ ++K G
Sbjct: 219 NTLITGYEKDGLYTESIHLFL---------KMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
++H ++V GF D V ++D Y K + R +FDEM E VS+ VI Y++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 216 GDMSEARKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDK----MRDKNVISW 267
+ F M +R F M+ L + M + L + D +
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
S+V Y + E A L+F +P++ +W A+I G+ + LKLF +M +++
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGSNL 448
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
++ T +VL A A +L LG + F R +V + L+DMYAKCG I A
Sbjct: 449 RADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQ 508
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+FEEMP++ SWNALI+ A NG + A+ F MI G +P+ ++++GVL+AC+HCG
Sbjct: 509 VFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGF 568
Query: 448 VDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL 506
V++G F+AM +GI P+ +HY CM+DLLGR G EAE L+ MPF+ + I+ SS L
Sbjct: 569 VEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
Query: 507 FACGHFKDVSRAERVLRETVKMEK-ECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY 565
AC K+ S AER + MEK A YV + N+YA W V DVK M+ RG
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Query: 566 KEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
K A S +EV+ + F + D H N + I + +L ++ E
Sbjct: 689 KVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 197/444 (44%), Gaps = 23/444 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR FDA R ++ + F E F LFR +CR ++ P
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL-------PDH 147
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLD--LYVATALVDMYVKFGVLGSARKVF 194
TFT L+ GC + +VH AVK GF + L V+ L+ Y + L A +F
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK--LGCMDMA 252
+E+ E+ V++ +I GY + G +E+ LF M + + G +K +G D A
Sbjct: 208 EEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFA 267
Query: 253 --QDLFDK------MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
Q L RD +V ++ Y ++ V R++FD MPE + ++N +I
Sbjct: 268 LGQQLHALSVTTGFSRDASV--GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ + Q +L FREM + ++L A+L +L +G + A D
Sbjct: 326 YSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
+ V +L+DMYAKC A L+F+ +P++ T SW ALI+G+ G L++F M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLD 484
R ++ T VL A + G++ + G + +VD+ + G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 485 EAENLIQTMPFDANGIILSSFLFA 508
+A + + MP D N + ++ + A
Sbjct: 505 DAVQVFEEMP-DRNAVSWNALISA 527
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 149/286 (52%), Gaps = 14/286 (4%)
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
+ D N +++ ++ G + A+ ++D+M KN +S +M+SG+ + GDV SAR +FD
Sbjct: 45 DTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDA 104
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE-PNEVTLLSVLPAVADLGALD 348
MP++ + TW ++G + +N EA KLFR+M S+S P+ VT ++LP D +
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQN 164
Query: 349 LGGWIQGFARRKKLDGS--VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALING 406
G + FA + D + + VS L+ Y + + A +LFEE+PEK++ ++N LI G
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD----EGRRCFKAMEGFG 462
+ +G E++ +F M + G +P++ T GVL A GL D + GF
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFALGQQLHALSVTTGFS 282
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSF 505
+ + ++D + + E L MP F + +++SS+
Sbjct: 283 RDASVGNQ--ILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 173/376 (46%), Gaps = 46/376 (12%)
Query: 163 VKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEAR 222
+K GF D + +V+ ++ G + +ARKV+DEM ++ VS +I G+ + GD+S AR
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 223 KLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM-RDKNV-----ISWTSMVSG--- 273
LFD MP+R V + +++ Y + D A LF +M R + +++T+++ G
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 274 ----------------------------------YCQNGDVESARLMFDLMPEKNLFTWN 299
YC+ ++ A ++F+ +PEK+ T+N
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 300 AMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARR 359
+I G+ K+ E++ LF +M S +P++ T VL AV L LG + +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHALSVT 278
Query: 360 KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEV 419
V ++D Y+K + R+LF+EMPE + S+N +I+ ++ + + +L
Sbjct: 279 TGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 420 FEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG-CMVDLLG 478
F M GF +LS + + GR+ A I H G +VD+
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ-LHCQALLATADSILHVGNSLVDMYA 397
Query: 479 RAGCLDEAENLIQTMP 494
+ +EAE + +++P
Sbjct: 398 KCEMFEEAELIFKSLP 413
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 179/594 (30%), Positives = 283/594 (47%), Gaps = 53/594 (8%)
Query: 34 LLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEF 93
+LQ+HA ++ S+ + L +K I+ +R++ R A FD R+ F
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISF-------YTRQDR----FRQALHVFDEITVRNAF 89
Query: 94 LCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
N+++ + + + + F+LF + + P + GC
Sbjct: 90 SYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGS 149
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
+VHG ++ GF D++V ++ Y K + SARKVFDEMSER VSW ++I GY+
Sbjct: 150 LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 214 RCGDMSEARKLFDVM-------P---------------------------------ERDV 233
+ G + +K++ M P + D+
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 234 AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK 293
+ N +I Y K G +D A+ LFD+M +K+ +++ +++SGY +G V+ A +F M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
L TWNAMI G +N E + FREM+ S PN VTL S+LP++ L G I
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGS-RPNTVTLSSLLPSLTYSSNLKGGKEI 388
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
FA R D ++ V+T++ID YAK G + A+ +F+ ++ +W A+I +AV+G +
Sbjct: 389 HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS 448
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGC 472
A +F+ M G +P+++T+ VLSA H G D + F +M + I P +EHY C
Sbjct: 449 DSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
MV +L RAG L +A I MP D + + L D+ A +ME E
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
G+Y ++ NLY RW + E V++ MK G K S IE + R F+A D
Sbjct: 569 TGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKD 622
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 130/315 (41%), Gaps = 49/315 (15%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNL---LAKFITTCASIAVSTSRRNEAVSIVRHAR 81
C + L++H M+ N + +L+L + F C S+ +AR
Sbjct: 244 CGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSL--------------DYAR 289
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDL-CRGTAT---------------- 124
FD ++D ++I+ + A E LF ++ G +T
Sbjct: 290 ALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEE 349
Query: 125 -----RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVD 179
R M +P T ++L+ T + G E+H A++NG ++YV T+++D
Sbjct: 350 VINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIID 409
Query: 180 MYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAA 235
Y K G L A++VFD +RS ++WTA+I Y GD A LFD M + D
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 236 FNVMIDGYVKLGCMDMAQDLFDKMRDK-----NVISWTSMVSGYCQNGDVESARLMFDLM 290
++ + G DMAQ +FD M K V + MVS + G + A M
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKM 529
Query: 291 PEKNLF-TWNAMIGG 304
P + W A++ G
Sbjct: 530 PIDPIAKVWGALLNG 544
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 213/358 (59%), Gaps = 4/358 (1%)
Query: 249 MDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ +A+ LFD+M ++NV+SWT+M+SGY ++GD+ +A +F+ MPE+++ +WNA++ +N
Sbjct: 178 ITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQN 237
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
EA+ LFR M+ S+ PNEVT++ VL A A G L L I FA R+ L V V
Sbjct: 238 GLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFV 297
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR--- 425
S +L+D+Y KCG + A +F+ +K +WN++IN FA++GR++EA+ VFE M++
Sbjct: 298 SNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNI 357
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLD 484
+P+ IT IG+L+AC H GLV +GR F M FGI P+IEHYGC++DLLGRAG D
Sbjct: 358 NDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFD 417
Query: 485 EAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYA 544
EA ++ TM A+ I S L AC + AE ++ V + G ++ NLY
Sbjct: 418 EALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYG 477
Query: 545 TEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
W + + M+K + +YK S IE+D +F + D H E I + L L
Sbjct: 478 EMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 205/482 (42%), Gaps = 72/482 (14%)
Query: 28 KKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDAT 87
+ + L Q+ +FM+ + + ++ L K + C + S +AR FD
Sbjct: 34 SRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLS----------YARFIFDRF 83
Query: 88 HKRDEFLCNSMITTHFAIRQF--SEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKG 145
+ L +++T + + S F+ FR + + R P + ++K
Sbjct: 84 SFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPR--------PNHFIYPLVLKS 135
Query: 146 CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK-FGVLGSARKVFDEMSERSRVS 204
+ VH K+GF L + V TAL+ Y + AR++FDEMSER+ VS
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM----- 259
WTA++ GY R GD+S A LF+ MPERDV ++N ++ + G A LF +M
Sbjct: 196 WTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 260 ---------------------------------RD--KNVISWTSMVSGYCQNGDVESAR 284
RD +V S+V Y + G++E A
Sbjct: 256 IRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 285 LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM--LMSASVEPNEVTLLSVLPAVA 342
+F + +K+L WN+MI + + EA+ +F EM L ++P+ +T + +L A
Sbjct: 316 SVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACT 375
Query: 343 DLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-ETASW 400
G + G G+ R ++ + LID+ + G A + M K + A W
Sbjct: 376 HGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW 435
Query: 401 NALINGFAVNGRAKEALEVFEMMIRE--GFRPNEITMIGVLSAC-NHCGLVDEGRRCFKA 457
+L+N ++G L++ E+ ++ PN + +++ G +E RR K
Sbjct: 436 GSLLNACKIHGH----LDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 458 ME 459
++
Sbjct: 492 IK 493
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 222/384 (57%), Gaps = 10/384 (2%)
Query: 222 RKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVE 281
R+ FD P +I Y +LGC+D +F+ + + + T+MV+ + GDV
Sbjct: 136 RRGFDNDPHVQTG----LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 282 SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
AR +F+ MPE++ WNAMI G+ + + EAL +F M + V+ N V ++SVL A
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG-VKVNGVAMISVLSAC 250
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWN 401
LGALD G W + R K+ +VR++T L+D+YAKCG++ +A +F M EK +W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 402 ALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG- 460
+ +NG A+NG ++ LE+F +M ++G PN +T + VL C+ G VDEG+R F +M
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 461 FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAER 520
FGI PQ+EHYGC+VDL RAG L++A ++IQ MP + + SS L A +K++
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVL 430
Query: 521 VLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFR 580
++ +++E G YVLL N+YA W +V V+ MK +G K+ CSV+EV+G
Sbjct: 431 ASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 581 EFVAGDYLHSNLEVIQLTLGQLWK 604
EF GD H I +WK
Sbjct: 491 EFFVGDKSHPKYTQID----AVWK 510
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 195/418 (46%), Gaps = 58/418 (13%)
Query: 30 TITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHK 89
T + QIHA + + + +L+ F+ ++A+S + + +A + D + K
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVK---AVALSDHK------YLDYANQILDRSEK 68
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
F NSMI H + F +R + + KP +T LV+ CT
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILS-------SGNDLKPDNYTVNFLVQACTGL 121
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
GL+VHG+ ++ GF D +V T L+ +Y + G L S KVF+ + V TA++
Sbjct: 122 RMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMV 181
Query: 210 VGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----- 264
RCGD+ ARKLF+ MPERD A+N MI GY ++G A ++F M+ + V
Sbjct: 182 TACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGV 241
Query: 265 --IS---------------W-----------------TSMVSGYCQNGDVESARLMFDLM 290
IS W T++V Y + GD+E A +F M
Sbjct: 242 AMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM 301
Query: 291 PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
EKN++TW++ + G N + L+LF ++ V PN VT +SVL + +G +D G
Sbjct: 302 EEKNVYTWSSALNGLAMNGFGEKCLELF-SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG 360
Query: 351 GWIQGFARRK-KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALING 406
R + ++ + L+D+YA+ G + A + ++MP K A+ W++L++
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 127/308 (41%), Gaps = 39/308 (12%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSI-------- 76
C + T LQ+H +R DN+ ++ I+ A + S SI
Sbjct: 118 CTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCR 177
Query: 77 ------------VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTAT 124
V AR+ F+ +RD N+MI+ + + + E +F
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF--------- 228
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
M + K G +++ CT A +G H +N + + +AT LVD+Y K
Sbjct: 229 HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC 288
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMI 240
G + A +VF M E++ +W++ + G G + +LF +M + V F ++
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
Query: 241 DGYVKLGCMDMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMPEK-N 294
G +G +D Q FD MR++ I + +V Y + G +E A + MP K +
Sbjct: 349 RGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
Query: 295 LFTWNAMI 302
W++++
Sbjct: 409 AAVWSSLL 416
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 241/417 (57%), Gaps = 2/417 (0%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D+ +T ++ + G + AR +FDEM ER+ V+WT +I GY + + ARKLF+VMP
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP 230
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
E+ ++ M+ GY G ++ A++ F+ M K VI+ +M+ G+ + G++ AR +FDL
Sbjct: 231 EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
M +++ TW MI + + EAL LF +M V P+ +L+S+L A L +L
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQM-QKQGVRPSFPSLISILSVCATLASLQY 349
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G + R + D V V++ L+ MY KCGE+ +A+L+F+ K+ WN++I+G+A
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIE 468
+G +EAL++F M G PN++T+I +L+AC++ G ++EG F++ME F + P +E
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKM 528
HY C VD+LGRAG +D+A LI++M + + + L AC + AE ++ +
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Query: 529 EKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
E + AG YVLL ++ A+ +W DV V+ M+ K CS IEV + F G
Sbjct: 530 EPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRG 586
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 155/279 (55%), Gaps = 9/279 (3%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
LV Y+K ++ AR VF+ M ER+ VSWTA++ GY + G + EA LF MPER+
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
++ VM G + G +D A+ L+D M K+V++ T+M+ G C+ G V+ ARL+FD M E+N
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+ TW MI G+ +N + A KLF M E EV+ S+L G ++ +
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVM-----PEKTEVSWTSMLLGYTLSGRIEDA---E 254
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
F + V A+I + + GEI +AR +F+ M +++ A+W +I + G
Sbjct: 255 EFFEVMPMK-PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
EAL++F M ++G RP+ ++I +LS C + GR+
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQ 352
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 13/277 (4%)
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
+ G + ARK FD + ++ SW +++ GY G EAR+LFD M ER+V ++N ++ G
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSG 88
Query: 243 YVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
Y+K + A+++F+ M ++NV+SWT+MV GY Q G V A +F MPE+N +W M
Sbjct: 89 YIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMF 148
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
GG + + +A KL+ M + + V +++ + G +D I R +
Sbjct: 149 GGLIDDGRIDKARKLYDMMPVK-----DVVASTNMIGGLCREGRVDEARLIFDEMRER-- 201
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
+V T +I Y + + AR LFE MPEK SW +++ G+ ++GR ++A E FE+
Sbjct: 202 --NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
M + ++G G + + RR F ME
Sbjct: 260 MPMKPVIACNAMIVGF----GEVGEISKARRVFDLME 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 125/305 (40%), Gaps = 30/305 (9%)
Query: 17 RKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLA----KFITTCASIAVSTSRRNE 72
RK +++ K++ + T++L + L +++ K + C ++ V E
Sbjct: 223 RKLFEVMPEKTEVSWTSMLL--GYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGE 280
Query: 73 AVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPF 132
+ ARR FD RD MI + E LF M
Sbjct: 281 ----ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQ---------MQKQGV 327
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P + +++ C + + G +VH V+ F D+YVA+ L+ MYVK G L A+
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGC 248
VFD S + + W ++I GY G EA K+F MP V + + G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 249 MDMAQDLFDKMRDK-----NVISWTSMVSGYCQNGDVESARLMFDLMPEK-NLFTWNAMI 302
++ ++F+ M K V ++ V + G V+ A + + M K + W A++
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 303 GGHCK 307
G CK
Sbjct: 508 GA-CK 511
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 63/290 (21%)
Query: 271 VSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
+S + G + AR FD + K + +WN+++ G+ N P EA +LF EM
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------- 74
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKL-----------DGSVRVSTALIDMYAKC 379
++ + G + G+ + + + + +V TA++ Y +
Sbjct: 75 -----------SERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQE 123
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G +G A LF MPE+ SW + G +GR +A ++++MM + + MIG L
Sbjct: 124 GMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS-TNMIGGL 182
Query: 440 SACNHCGLVDEGRRCFKAMEG-------------------------FGIAPQIEHYGCMV 474
C G VDE R F M F + P+
Sbjct: 183 --CRE-GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 475 DLLGR--AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVL 522
LLG +G +++AE + MP I ++ + G ++S+A RV
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPV-IACNAMIVGFGEVGEISKARRVF 288
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 227/383 (59%), Gaps = 3/383 (0%)
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
E D +I Y KLG + A+ +FD+M ++V W +M++GY + GD+++A +FD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
MP KN+ +W +I G +N EALK+F M SV+PN +T++SVLPA A+LG L++
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM-PEKETASWNALINGFA 408
G ++G+AR ++ V A I+MY+KCG I A+ LFEE+ ++ SWN++I A
Sbjct: 234 GRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQI 467
+G+ EAL +F M+REG +P+ +T +G+L AC H G+V +G+ FK+ME I+P++
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
EHYGCM+DLLGR G L EA +LI+TMP + ++ + L AC +V AE K
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 528 MEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS-VIEVDGRFREFVAGD 586
+E G+ V++ N+YA ++W V ++ +MK K S +EV +F D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 587 YLHSNLEVIQLTLGQLWKHMKVE 609
H I L ++++ MK+E
Sbjct: 474 KSHPRSYEIYQVLEEIFRRMKLE 496
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 188/452 (41%), Gaps = 69/452 (15%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+HA LR VD +LL + + + + +AR+ FD FL
Sbjct: 6 QLHAHCLRTGVDETKDLLQRLLL---------------IPNLVYARKLFDHHQNSCTFLY 50
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N +I ++ Q E L+ ++ +P HTF + + + R
Sbjct: 51 NKLIQAYYVHHQPHESIVLYN---------LLSFDGLRPSHHTFNFIFAASASFSSARPL 101
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
+H ++GF D + T L+ Y K G L AR+VFDEMS+R W A+I GY R
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 216 GDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF-----DKMRDKNVISWTSM 270
GDM A +LFD MP ++V ++ +I G+ + G A +F DK N I+ S+
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 271 VSGYCQNGDVE------------------------------------SARLMFDLMPEKN 294
+ G++E + RL +L ++N
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI- 353
L +WN+MIG + + EAL LF +ML +P+ VT + +L A G + G +
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELF 340
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA-SWNALINGFAVNGR 412
+ K+ + +ID+ + G++ A L + MP K A W L+ + +G
Sbjct: 341 KSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
Query: 413 AKEALEVFEMMIR-EGFRPNEITMIGVLSACN 443
+ A E + + E P ++ + A N
Sbjct: 401 VEIAEIASEALFKLEPTNPGNCVIMSNIYAAN 432
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 274/539 (50%), Gaps = 39/539 (7%)
Query: 73 AVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC-RGTATRTMTMTP 131
+ + AR+ FD RD F N+MI+ + R+ E LF + R + + +T
Sbjct: 117 GIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITG 176
Query: 132 FKPGGHTFTALV-------KGCTACMATREGL-------EVHGVAVKNGFCLD-----LY 172
F G +A+V K + A GL E V + G + +Y
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVY 236
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSE---------------RSRVSWTAVIVGYTRCGD 217
L+ Y + G + +AR +FD++ + ++ VSW ++I Y + GD
Sbjct: 237 AYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGD 296
Query: 218 MSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN 277
+ AR LFD M +RD ++N MIDGYV + M+ A LF +M +++ SW MVSGY
Sbjct: 297 VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASV 356
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G+VE AR F+ PEK+ +WN++I + KNK EA+ LF M + +P+ TL S+
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE-KPDPHTLTSL 415
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKE 396
L A L L LG + K + V V ALI MY++CGEI +R +F+EM ++E
Sbjct: 416 LSASTGLVNLRLGMQMHQIV-VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKRE 474
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
+WNA+I G+A +G A EAL +F M G P+ IT + VL+AC H GLVDE + F
Sbjct: 475 VITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFV 534
Query: 457 AMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDV 515
+M + I PQ+EHY +V++ G +EA +I +MPF+ + + + L AC + +V
Sbjct: 535 SMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Query: 516 SRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIE 574
A ++E E + YVLL N+YA W + V+ M+ + KE S ++
Sbjct: 595 GLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 154/293 (52%), Gaps = 48/293 (16%)
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN 237
++ ++ G + AR +F+++ R+ V+W +I GY + +M++ARKLFDVMP+RDV +N
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWN 106
Query: 238 VMIDGYVKLG---CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
MI GYV G ++ A+ LFD+M ++ SW +M+SGY +N + A L+F+ MPE+N
Sbjct: 107 TMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREM---------LMSASVEPNEVTLLSVLPAVADLG 345
+W+AMI G C+N + A+ LFR+M + A + NE L + G
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE-RLSEAAWVLGQYG 225
Query: 346 ALDLG---------GWIQGFARRKKLDGS--------------------------VRVST 370
+L G I G+ +R +++ + V
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
++I Y K G++ ARLLF++M +++T SWN +I+G+ R ++A +F M
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 43/192 (22%)
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
A N ++ ++ G + A+D+F+K+ +N ++W +M+SGY + ++ AR +FD+MP+++
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRD 101
Query: 295 LFTWNAMIGGHCK---NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
+ TWN MI G+ + EA KLF EM P+ D
Sbjct: 102 VVTWNTMISGYVSCGGIRFLEEARKLFDEM-------PSR----------------DSFS 138
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNG 411
W +I YAK IG A LLFE+MPE+ SW+A+I GF NG
Sbjct: 139 W-----------------NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
Query: 412 RAKEALEVFEMM 423
A+ +F M
Sbjct: 182 EVDSAVVLFRKM 193
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 255/511 (49%), Gaps = 77/511 (15%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M + KP T+ + C G VH K G D+++ +L+ MY K
Sbjct: 121 RRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAK- 179
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV 244
CG + ARKLFD + ERD ++N MI GY
Sbjct: 180 ------------------------------CGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 245 KLGCMDMAQDLFDKMRD-------KNVISW------------------------------ 267
+ G A DLF KM + + ++S
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 268 --TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
+ ++S Y + GD++SAR +F+ M +K+ W AMI + +N + EA KLF EM
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKT 328
Query: 326 SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRA 385
V P+ TL +VL A +GAL+LG I+ A L ++ V+T L+DMY KCG + A
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 386 RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+FE MP K A+WNA+I +A G AKEAL +F+ M P++IT IGVLSAC H
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHA 445
Query: 446 GLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSS 504
GLV +G R F M FG+ P+IEHY ++DLL RAG LDEA ++ P + I+L++
Sbjct: 446 GLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAA 505
Query: 505 FLFACGHFKDVSRAERVLRETVKM-EKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRG 563
L AC KDV+ E+ +R ++M E + AG+YV+ N+ A K W + ++ +M+ RG
Sbjct: 506 ILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRG 565
Query: 564 SYKEVACSVIEVDGRFREFVAG-DYLHSNLE 593
K CS IE++G EF+AG DYL E
Sbjct: 566 VVKTPGCSWIEIEGELMEFLAGSDYLQCGRE 596
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 10/327 (3%)
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC-GDMSEARKLFDVMP----ER 231
L+ V+ G + +F E + S+ +I G T D A L+ M +
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 232 DVAAFNVMIDGYVKLGCMDMAQD----LFDKMRDKNVISWTSMVSGYCQNGDVESARLMF 287
D +N + KL + + + LF +++V S++ Y + G V AR +F
Sbjct: 131 DKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLF 190
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
D + E++ +WN+MI G+ + +A+ LFR+M EP+E TL+S+L A + LG L
Sbjct: 191 DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-EEEGFEPDERTLVSMLGACSHLGDL 249
Query: 348 DLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGF 407
G ++ A KK+ S + + LI MY KCG++ AR +F +M +K+ +W A+I +
Sbjct: 250 RTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVY 309
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQI 467
+ NG++ EA ++F M + G P+ T+ VLSAC G ++ G++ + I
Sbjct: 310 SQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNI 369
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMP 494
+VD+ G+ G ++EA + + MP
Sbjct: 370 YVATGLVDMYGKCGRVEEALRVFEAMP 396
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 152/328 (46%), Gaps = 22/328 (6%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +AR+ FD +RD NSMI+ + + LF R M F+P
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF---------RKMEEEGFEPDE 233
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +++ C+ R G + +A+ L ++ + L+ MY K G L SAR+VF++
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQ 293
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMA 252
M ++ RV+WTA+I Y++ G SEA KLF M + D + ++ +G +++
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELG 353
Query: 253 QDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ + + N+ T +V Y + G VE A +F+ MP KN TWNAMI +
Sbjct: 354 KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQ 413
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVR 367
EAL LF M SV P+++T + VL A G + G + + L +
Sbjct: 414 GHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIE 469
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEK 395
T +ID+ ++ G + A E P K
Sbjct: 470 HYTNIIDLLSRAGMLDEAWEFMERFPGK 497
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 252/479 (52%), Gaps = 9/479 (1%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
KP +T L+K A G ++H ++ G C + + T +V+MYVK G L A++
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPER---DVAAFNVMIDGYVKLGC 248
VFD+M+ + V+ T ++VGYT+ G +A KLF D++ E D F+V++ L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 249 MDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
+++ + + + + V T +V Y + ESA F + E N +W+A+I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+C+ Q EA+K F+ + + N T S+ A + L ++GG + A ++ L G
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
S +ALI MY+KCG + A +FE M + +W A I+G A G A EAL +FE M+
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCL 483
G +PN +T I VL+AC+H GLV++G+ C M + +AP I+HY CM+D+ R+G L
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLL 540
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
DEA ++ MPF+ + + FL C K++ E E +++ E YVL NLY
Sbjct: 541 DEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
+W + ++ +M R KE++CS I+ G+ F+ GD H + I L +
Sbjct: 601 TWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 197/436 (45%), Gaps = 32/436 (7%)
Query: 106 RQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHG---VA 162
R+ +E F +++ + + + +++ L + C + G +H +
Sbjct: 62 RKLNEAFEFLQEMDKAGVSVS---------SYSYQCLFEACRELRSLSHGRLLHDRMRMG 112
Query: 163 VKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEAR 222
++N L + ++ MY + L A K+FDEMSE + VS T +I Y G + +A
Sbjct: 113 IENPSVL---LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAV 169
Query: 223 KLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSG----Y 274
LF M + + + ++ V +D + + + + S TS+ +G Y
Sbjct: 170 GLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY 229
Query: 275 CQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
+ G + A+ +FD M K ++ G+ + + +ALKLF + L++ VE +
Sbjct: 230 VKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD-LVTEGVEWDSFVF 288
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE 394
VL A A L L+LG I + L+ V V T L+D Y KC A F+E+ E
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 395 KETASWNALINGFAVNGRAKEALEVFEMM-IREGFRPNEITMIGVLSACNHCGLVDEGRR 453
SW+A+I+G+ + +EA++ F+ + + N T + AC+ + G +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 454 CF-KAMEGFGIAPQIEHYG--CMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG 510
A++ I Q YG ++ + + GCLD+A + ++M + + + ++F+
Sbjct: 409 VHADAIKRSLIGSQ---YGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHA 464
Query: 511 HFKDVSRAERVLRETV 526
++ + S A R+ + V
Sbjct: 465 YYGNASEALRLFEKMV 480
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 17/322 (5%)
Query: 218 MSEARKL---FDVMPERDVAAFNVMIDGYV-------KLGCMDMAQDLFDKMR----DKN 263
+S+ RKL F+ + E D A +V Y +L + + L D+MR + +
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPS 117
Query: 264 VISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
V+ ++ YC+ +E A +FD M E N + MI + + +A+ LF ML
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 324 SASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIG 383
S P+ + ++L ++ + ALD G I R L + + T +++MY KCG +
Sbjct: 178 SGDKPPSSM-YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 384 RARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
A+ +F++M K+ + L+ G+ GRA++AL++F ++ EG + VL AC
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 444 HCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM--PFDANGII 501
++ G++ + G+ ++ +VD + + A Q + P D +
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 502 LSSFLFACGHFKDVSRAERVLR 523
+ S F++ + + LR
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLR 378
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/515 (32%), Positives = 265/515 (51%), Gaps = 47/515 (9%)
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVL--GSARKVFDEM 197
++L+ C+ + ++HG ++ G Y+ T L+ K GV AR+V + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF--------------------- 236
R+ WTAVI GY G EA ++ M + ++
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGR 169
Query: 237 ------------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
N MID YVK +D A+ +FD+M +++VISWT +++ Y + G
Sbjct: 170 QFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
++E A +F+ +P K++ W AM+ G +N +P EAL+ F M S + +EVT+ +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSG-IRADEVTVAGYI 288
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGS--VRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
A A LGA A++ S V + +ALIDMY+KCG + A +F M K
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCF 455
+++++I G A +GRA+EAL +F M+ + +PN +T +G L AC+H GLVD+GR+ F
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 456 KAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKD 514
+M + FG+ P +HY CMVDLLGR G L EA LI+TM + +G + + L AC +
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Query: 515 VSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS-VI 573
AE ++E + G+Y+LL N+YA+ W V V+ ++K +G K A S V+
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 574 EVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
+ +G+ +F G+ H IQ L +L + + V
Sbjct: 529 DKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTV 563
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 185/434 (42%), Gaps = 80/434 (18%)
Query: 19 CLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVR 78
C++L Q K QIH +LR +D + +L K I T + V
Sbjct: 59 CINLNQIK---------QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP--------- 100
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
+ARR + R+ FL ++I + +F E ++ M P T
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYG---------CMRKEEITPVSFT 151
Query: 139 FTALVKGCTACMATREGLEVHGVAVK-NGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
F+AL+K C G + H + GFC +YV ++DMYVK + ARKVFDEM
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
ER +SWT +I Y R G+M A +LF+ +P +D+ A+ M+ G+ + A + FD
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 258 KMRDK-----------------------------------------NVISWTSMVSGYCQ 276
+M +V+ ++++ Y +
Sbjct: 271 RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
G+VE A +F M KN+FT+++MI G + + EAL LF M+ ++PN VT +
Sbjct: 331 CGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVG 390
Query: 337 VLPAVADLGALDLGGWI-----QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE 391
L A + G +D G + Q F + D T ++D+ + G + A L +
Sbjct: 391 ALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH----YTCMVDLLGRTGRLQEALELIKT 446
Query: 392 MP-EKETASWNALI 404
M E W AL+
Sbjct: 447 MSVEPHGGVWGALL 460
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI--GRARLL 388
E+ + S++ + D L+ I G RK LD S + T LI K G AR +
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
E + + W A+I G+A+ G+ EA+ ++ M +E P T +L AC +
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 449 DEGRRCFKA----MEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+ GR+ F A + GF + M+D+ + +D A + MP
Sbjct: 166 NLGRQ-FHAQTFRLRGFCF---VYVGNTMIDMYVKCESIDCARKVFDEMP 211
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 277/579 (47%), Gaps = 64/579 (11%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ FD D NS+I ++ + + +F + R P T
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCR--------PDNITL 232
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++ C + G ++H AV + +++V LVDMY K G++ A VF MS
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLG----CMDM 251
+ VSW A++ GY++ G +A +LF+ M E DV ++ I GY + G + +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 252 AQDLFDKMRDKNVISWTSMVSG-------------------------------------- 273
+ + N ++ S++SG
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 274 ----YCQNGDVESARLMFD-LMP-EKNLFTWNAMIGGHCKNKQPHEALKLFREMLM-SAS 326
Y + V++AR MFD L P E+++ TW MIGG+ ++ ++AL+L EM
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG-SVRVSTALIDMYAKCGEIGRA 385
PN T+ L A A L AL +G I +A R + + + VS LIDMYAKCG I A
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 386 RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
RL+F+ M K +W +L+ G+ ++G +EAL +F+ M R GF+ + +T++ VL AC+H
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 446 GLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSS 504
G++D+G F M+ FG++P EHY C+VDLLGRAG L+ A LI+ MP + ++ +
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVA 652
Query: 505 FLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGS 564
FL C V E + ++ G Y LL NLYA RW DV ++ +M+ +G
Sbjct: 653 FLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGV 712
Query: 565 YKEVACSVIEVDGRFREFVAGDYLHSNL-EVIQLTLGQL 602
K CS +E F GD H + E+ Q+ L +
Sbjct: 713 KKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 241/521 (46%), Gaps = 76/521 (14%)
Query: 29 KTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
KTI+ + IH +L + LNL + I+T S+ + AVS++R RF
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLS----HAVSLLR---RF--PPS 88
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
+ NS+I ++ ++ LF M + P +TF + K C
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFG---------LMHSLSWTPDNYTFPFVFKACGE 139
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
+ R G H +++ GF +++V ALV MY + L ARKVFDEMS VSW ++
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 209 IVGYTRCGDMSEARKLF-----------------DVMPE--------------------- 230
I Y + G A ++F +V+P
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 231 --RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFD 288
+++ N ++D Y K G MD A +F M K+V+SW +MV+GY Q G E A +F+
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 289 LMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
M E+ ++ TW+A I G+ + +EAL + R+ML S+ ++PNEVTL+SVL A +
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML-SSGIKPNEVTLISVLSGCASV 378
Query: 345 GALDLGGWIQGFARRKKLD-------GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE- 396
GAL G I +A + +D V LIDMYAKC ++ AR +F+ + KE
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 397 -TASWNALINGFAVNGRAKEALEVFEMMIREG--FRPNEITMIGVLSACNHCGLVDEGRR 453
+W +I G++ +G A +ALE+ M E RPN T+ L AC + G++
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 454 CFK-AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
A+ A + C++D+ + G + +A + M
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM 539
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 214 RCGDMSEARKLFDVMPERDVAAFNV---MIDGYVKLGCMDMAQDLFDKM--RDKNVISWT 268
+C +S+ + + + + N+ +I Y+ +GC+ A L + D V W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
S++ Y NG C NK L LF ++ S S
Sbjct: 97 SLIRSYGDNG---------------------------CANK----CLYLF-GLMHSLSWT 124
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL 388
P+ T V A ++ ++ G + +V V AL+ MY++C + AR +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE-GFRPNEITMIGVLSACNHCGL 447
F+EM + SWN++I +A G+ K ALE+F M E G RP+ IT++ VL C G
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 448 VDEGRRCFKAMEGFGIAPQIEHY----GCMVDLLGRAGCLDEAENLIQTMPFDANGIILS 503
G K + F + ++ C+VD+ + G +DEA + M ++
Sbjct: 245 HSLG----KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNM--SVKDVVSW 298
Query: 504 SFLFA----CGHFKDVSRA-ERVLRETVKME 529
+ + A G F+D R E++ E +KM+
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 286/541 (52%), Gaps = 19/541 (3%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + F+ +RD NSMI+ + A+ LF+++ + FKP +
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK---------CGFKPDRFST 234
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGF-CLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+ + C+ + + G E+H AV++ D+ V T+++DMY K+G + A ++F+ M
Sbjct: 235 MSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMI 294
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD------VAAFNVMIDGYVKLGCMDMA 252
+R+ V+W +I Y R G +++A F M E++ + + N++ + G
Sbjct: 295 QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHG 354
Query: 253 QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
+ V+ T+++ Y + G ++SA ++FD M EKN+ +WN++I + +N + +
Sbjct: 355 YAMRRGFLPHMVLE-TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNY 413
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
AL+LF+E L +S+ P+ T+ S+LPA A+ +L G I + + + + + +L
Sbjct: 414 SALELFQE-LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
+ MYA CG++ AR F + K+ SWN++I +AV+G + ++ +F MI PN+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 433 ITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
T +L+AC+ G+VDEG F++M+ +GI P IEHYGCM+DL+GR G A+ ++
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 492 TMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTD 551
MPF I S L A + KD++ AE + KME + G YVLL N+YA RW D
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 552 VEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEII 611
V +K +M+ +G + + S +E G+ F GD H I L + + + E I
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDI 712
Query: 612 Y 612
Y
Sbjct: 713 Y 713
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 191/386 (49%), Gaps = 22/386 (5%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
++ A + FD +K D FL N MI + + E + M K
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYS---------RMVFAGVKAD 129
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
T+ ++K + EG ++H + +K GF D+YV +L+ +Y+K G A KVF+
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PER--DVAAFNVMIDGYV-KL 246
EM ER VSW ++I GY GD + LF M P+R ++A Y K+
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM 249
Query: 247 GCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
G + ++ +V+ TS++ Y + G+V A +F+ M ++N+ WN MIG +
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYA 309
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSV 366
+N + +A F++M ++P+ +T +++LPA A L G I G+A R+ +
Sbjct: 310 RNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHM 365
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE 426
+ TALIDMY +CG++ A ++F+ M EK SWN++I + NG+ ALE+F+ +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 427 GFRPNEITMIGVLSACNHCGLVDEGR 452
P+ T+ +L A + EGR
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGR 451
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 253 QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
+D + + N + T + G+ + +E A +FD M + + F WN MI G
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
EA++ + M+ A V+ + T V+ +VA + +L+ G I + V V +L
Sbjct: 113 EAVQFYSRMVF-AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL 171
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
I +Y K G A +FEEMPE++ SWN++I+G+ G +L +F+ M++ GF+P+
Sbjct: 172 ISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR 231
Query: 433 ITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMV-----DLLGRAGCLDEAE 487
+ + L AC+H G K + + +IE MV D+ + G + AE
Sbjct: 232 FSTMSALGACSHVYSPKMG----KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 488 NLIQTM 493
+ M
Sbjct: 288 RIFNGM 293
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%)
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
LF+EM + + WN +I GF G EA++ + M+ G + + T V+ +
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
++EG++ + G + ++ L + GC +AE + + MP
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP 192
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 271/544 (49%), Gaps = 74/544 (13%)
Query: 71 NEAVSIVRHARRFFDATH-KRDEFLCNSMI---TTHFAIRQFSEPFTLFRDLCRGTATRT 126
++ +I+ +A F H K + FL N +I + + Q P +++
Sbjct: 2 SKGAAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYL---------R 52
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M P HTF L+ + G H + G D +V T+L++MY G
Sbjct: 53 MRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGD 112
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
L SA++VFD+ + +W +V+ Y + G + +ARKLFD MPER+V +++ +I+GYV
Sbjct: 113 LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMC 172
Query: 247 GCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
G A DLF +M+ +P
Sbjct: 173 GKYKEALDLFREMQ-----------------------------LP--------------- 188
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSV 366
+P+EA V PNE T+ +VL A LGAL+ G W+ + + ++ +
Sbjct: 189 ---KPNEAF-----------VRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDI 234
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEM-PEKETASWNALINGFAVNGRAKEALEVF-EMMI 424
+ TALIDMYAKCG + RA+ +F + +K+ +++A+I A+ G E ++F EM
Sbjct: 235 VLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT 294
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCL 483
+ PN +T +G+L AC H GL++EG+ FK M E FGI P I+HYGCMVDL GR+G +
Sbjct: 295 SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLI 354
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
EAE+ I +MP + + +I S L D+ E L+ ++++ +G YVLL N+Y
Sbjct: 355 KEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVY 414
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
A RW +V+ ++H M+++G K CS +EV+G EFV GD E I L ++
Sbjct: 415 AKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIM 474
Query: 604 KHMK 607
+ ++
Sbjct: 475 QRLR 478
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 263/516 (50%), Gaps = 51/516 (9%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGF--CLDLYVATALVDMYVKFGVLGSARKVFDE--M 197
L++ C R G E+H V +G Y++ AL Y G + +A+K+FDE +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-------------------------- 231
SE+ V WT ++ ++R G + + KLF M +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 232 -------------DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
V N ++D Y K G + + +F+++ +K+V+SWT ++ +
Sbjct: 132 QGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWE 191
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
+E R +F MPE+N W M+ G+ E L+L EM+ N VTL S+L
Sbjct: 192 GLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 339 PAVADLGALDLGGWIQGFARRKKL-------DGSVRVSTALIDMYAKCGEIGRARLLFEE 391
A A G L +G W+ +A +K++ V V TAL+DMYAKCG I + +F
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 392 MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEG 451
M ++ +WNAL +G A++G+ + +++F MIRE +P+++T VLSAC+H G+VDEG
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEG 370
Query: 452 RRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGH 511
RCF ++ +G+ P+++HY CMVDLLGRAG ++EAE L++ MP N ++L S L +C
Sbjct: 371 WRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 512 FKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
V AER+ RE ++M +L+ N+Y E R + ++ ++ RG K S
Sbjct: 431 HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Query: 572 VIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
I V+ F +GD H + I L L ++ + ++
Sbjct: 491 SIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 26/248 (10%)
Query: 136 GHTFTALVKGCTACMATRE---GLEVHGVAVKNGFCL-------DLYVATALVDMYVKFG 185
G F L +AC + G VH A+K + D+ V TALVDMY K G
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE------RDVAAFNVM 239
+ S+ VF M +R+ V+W A+ G G + R + D+ P+ D F +
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHG---KGRMVIDMFPQMIREVKPDDLTFTAV 357
Query: 240 IDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMP-EKN 294
+ G +D F +R + V + MV + G +E A ++ MP N
Sbjct: 358 LSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPN 417
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+++G + + A ++ RE L+ S E +L VA+ G D+ ++
Sbjct: 418 EVVLGSLLGSCSVHGKVEIAERIKRE-LIQMSPGNTEYQILMSNMYVAE-GRSDIADGLR 475
Query: 355 GFARRKKL 362
G R++ +
Sbjct: 476 GSLRKRGI 483
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 210/344 (61%), Gaps = 3/344 (0%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
S++ Y GDV SA +FD MPEK+L WN++I G +N +P EAL L+ EM S +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGI 85
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
+P+ T++S+L A A +GAL LG + + + L ++ S L+D+YA+CG + A+
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM-IREGFRPNEITMIGVLSACNHCG 446
LF+EM +K + SW +LI G AVNG KEA+E+F+ M EG P EIT +G+L AC+HCG
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 447 LVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
+V EG F+ M E + I P+IEH+GCMVDLL RAG + +A I++MP N +I +
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 506 LFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY 565
L AC D AE + +++E +GDYVLL N+YA+E+RW+DV+ ++ M G
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 566 KEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
K S++EV R EF+ GD H + I L ++ ++ E
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSE 369
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 87/158 (55%), Gaps = 1/158 (0%)
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
LG I R + V +L+ +YA CG++ A +F++MPEK+ +WN++INGFA
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
NG+ +EAL ++ M +G +P+ T++ +LSAC G + G+R M G+ +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL 506
++DL R G ++EA+ L M D N + +S +
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 72/301 (23%)
Query: 152 TREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG 211
R G +H V +++GF +YV +L+ +Y G + SA KVFD+M E+ V+W +VI G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 212 YTRCGDMSEARKLFDVM------PE---------------------------------RD 232
+ G EA L+ M P+ R+
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 233 VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPE 292
+ + NV++D Y + G ++ A+ LFD+M DKN +SWTS++ G NG
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG-------------- 169
Query: 293 KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-G 351
G EA++LF+ M + + P E+T + +L A + G + G
Sbjct: 170 ---------FG--------KEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE 212
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVN 410
+ + K++ + ++D+ A+ G++ +A + MP + W L+ V+
Sbjct: 213 YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Query: 411 G 411
G
Sbjct: 273 G 273
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 20/239 (8%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V A + FD ++D NS+I + E L+ + M KP G
Sbjct: 39 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE---------MNSKGIKPDG 89
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +L+ C A G VH +K G +L+ + L+D+Y + G + A+ +FDE
Sbjct: 90 FTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE 149
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD-----VAAFNVMIDGYVKLGCMDM 251
M +++ VSWT++IVG G EA +LF M + F ++ G +
Sbjct: 150 MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 209
Query: 252 AQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGG 304
+ F +MR++ I + MV + G V+ A MP + N+ W ++G
Sbjct: 210 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 268
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 274/541 (50%), Gaps = 18/541 (3%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A R FD K D +SM++ + FR R + + P T
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR--------RMVMASDVTPDRVTL 166
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
LV CT +R G VHG ++ GF DL + +L++ Y K A +F ++E
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDL 255
+ +SW+ VI Y + G +EA +F+ M E +VA ++ ++ +
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 256 FD----KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ K + V T++V Y + E A +F +P K++ +W A+I G N
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
H +++ F ML+ + P+ + ++ VL + ++LG L+ + + D + + +
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG-FRP 430
L+++Y++CG +G A +F + K+T W +LI G+ ++G+ +ALE F M++ +P
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
NE+T + +LSAC+H GL+ EG R FK M + +AP +EHY +VDLLGR G LD A +
Sbjct: 467 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
+ MPF IL + L AC ++ AE V ++ ++E AG Y+L+ N+Y + W
Sbjct: 527 TKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEW 586
Query: 550 TDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
+VE +++ +K RG K +A S+IE+ + FVA D LH E + L +L HMK +
Sbjct: 587 ENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Query: 610 I 610
+
Sbjct: 647 L 647
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 213/493 (43%), Gaps = 90/493 (18%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ F KR + N+++ + +Q+ E F + R KP T
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE---------KPDNFTL 63
Query: 140 TALVKGCTACMATREGLEVHGVAVKN-GFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+K C G +HG K+ DLYV ++L+ MY+K G + A ++FDE+
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLF-------DVMPER-------------------- 231
+ V+W++++ G+ + G +A + F DV P+R
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 232 -------------DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
D++ N +++ Y K A +LF + +K+VISW+++++ Y QNG
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
A L+F+ M M EPN T+L VL
Sbjct: 244 AAAEALLVFNDM--------------------------------MDDGTEPNVATVLCVL 271
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
A A L+ G A RK L+ V+VSTAL+DMY KC A +F +P K+
Sbjct: 272 QACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVV 331
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIRE-GFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SW ALI+GF +NG A ++E F +M+ E RP+ I M+ VL +C+ G +++ +CF +
Sbjct: 332 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHS 390
Query: 458 M---EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKD 514
GF P I +V+L R G L A + + + ++ +S + G
Sbjct: 391 YVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSLITGYGIHGK 447
Query: 515 VSRAERVLRETVK 527
++A VK
Sbjct: 448 GTKALETFNHMVK 460
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 31/332 (9%)
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PE------ 230
KF AR++F EM++RS W ++ +R E F M P+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 231 --------RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVES 282
R+V + MI G+VK + + DL+ +S++ Y + G +
Sbjct: 66 ALKACGELREVN-YGEMIHGFVKKD-VTLGSDLY---------VGSSLIYMYIKCGRMIE 114
Query: 283 ARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
A MFD + + ++ TW++M+ G KN P++A++ FR M+M++ V P+ VTL++++ A
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNA 402
L LG + GF R+ + + +L++ YAK A LF+ + EK+ SW+
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWST 234
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
+I + NG A EAL VF M+ +G PN T++ VL AC +++GR+ + G
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+ +++ +VD+ + +EA + +P
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 179/408 (43%), Gaps = 38/408 (9%)
Query: 1 MGDESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTC 60
M + P R T C L + + + H F++R N+L+L+ +
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCV------HGFVIRRGFSNDLSLVNSLLNCY 208
Query: 61 ASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC- 119
A + EAV++ F ++D +++I + +E +F D+
Sbjct: 209 A----KSRAFKEAVNL-------FKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD 257
Query: 120 RGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVD 179
GT +P T +++ C A +G + H +A++ G ++ V+TALVD
Sbjct: 258 DGT----------EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVD 307
Query: 180 MYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAA 235
MY+K A VF + + VSW A+I G+T G + + F +M R A
Sbjct: 308 MYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAI 367
Query: 236 FNVMIDGYV-KLGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLM 290
V + G +LG ++ A+ + D N S+V Y + G + +A +F+ +
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 291 PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
K+ W ++I G+ + + +AL+ F M+ S+ V+PNEVT LS+L A + G + G
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 351 GWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
I + +L ++ L+D+ + G++ A + + MP T
Sbjct: 488 LRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPT 535
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 299/613 (48%), Gaps = 38/613 (6%)
Query: 1 MGDESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTC 60
M D P + ST C L + K QIHA +LR ++ + +L+ I +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGK------QIHAHILRYGLEMDASLMNVLIDS- 293
Query: 61 ASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCR 120
V R V A + F+ ++ ++++ + E LF
Sbjct: 294 ---YVKCGR-------VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT---- 339
Query: 121 GTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDM 180
+M+ KP + ++++ C + A G +VH +K D YV +L+DM
Sbjct: 340 -----SMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 181 YVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG---DMSEARKLFDVMPER----DV 233
Y K L ARKVFD + V + A+I GY+R G ++ EA +F M R +
Sbjct: 395 YAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSL 454
Query: 234 AAFNVMIDGYVKLGCMDMAQDL----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
F ++ L + +++ + F + ++ + ++++ Y ++ +RL+FD
Sbjct: 455 LTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDE 514
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
M K+L WN+M G+ + + EAL LF E+ +S P+E T +++ A +L ++ L
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQL 573
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G ++ L+ + ++ AL+DMYAKCG A F+ ++ WN++I+ +A
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
+G K+AL++ E M+ EG PN IT +GVLSAC+H GLV++G + F+ M FGI P+ EH
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH 693
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
Y CMV LLGRAG L++A LI+ MP I+ S L C +V AE + +
Sbjct: 694 YVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSD 753
Query: 530 KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
+ +G + +L N+YA++ WT+ + V+ MK+ G KE S I ++ F++ D H
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSH 813
Query: 590 SNLEVIQLTLGQL 602
I L L
Sbjct: 814 CKANQIYEVLDDL 826
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 173/369 (46%), Gaps = 40/369 (10%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
VHG + G LD Y++ L+++Y + G + ARKVF++M ER+ VSW+ ++ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 218 MSEARKLF--------DVMPERDVAAFNVM---IDGYVKLGCMDMAQDLFDKMRDKNVIS 266
E+ +F D E +++F +DG + + L D++V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
T ++ Y ++G+++ ARL+FD +PEK+ TW MI G K + + +L+LF + LM +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ-LMEDN 244
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
V P+ L +VL A + L L+ G I R L+ + LID Y KCG + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
LF MP K SW L++G+ N KEA+E+F M + G +P+ +L++C
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC---- 360
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHY-------------GCMVDLLGRAGCLDEAENLIQTM 493
++ G Q+ Y ++D+ + CL +A +
Sbjct: 361 ---------ASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDI- 410
Query: 494 PFDANGIIL 502
F A ++L
Sbjct: 411 -FAAADVVL 418
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 198/461 (42%), Gaps = 88/461 (19%)
Query: 79 HARRFFDATHKRDEFLCNSMIT--THFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+AR+ F+ +R+ ++M++ H I + E +F + R TR + P
Sbjct: 97 YARKVFEKMPERNLVSWSTMVSACNHHGI--YEESLVVFLEFWR---TRKDS-----PNE 146
Query: 137 HTFTALVKGCTACMATREGL--EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
+ ++ ++ C+ + ++ VK+GF D+YV T L+D Y+K G + AR VF
Sbjct: 147 YILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVF 206
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLF------DVMP------------------- 229
D + E+S V+WT +I G + G + +LF +V+P
Sbjct: 207 DALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLE 266
Query: 230 --------------ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYC 275
E D + NV+ID YVK G + A LF+ M +KN+ISWT+++SGY
Sbjct: 267 GGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 276 QNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLL 335
QN EA++LF M ++P+
Sbjct: 327 QNA-------------------------------LHKEAMELFTSM-SKFGLKPDMYACS 354
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
S+L + A L AL G + + + L V+ +LIDMYAKC + AR +F+
Sbjct: 355 SILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 396 ETASWNALINGFAVNG---RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGR 452
+ +NA+I G++ G EAL +F M RP+ +T + +L A + +
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSK 474
Query: 453 RCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ M +G+ I ++D+ CL ++ + M
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/584 (29%), Positives = 273/584 (46%), Gaps = 44/584 (7%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNN-------LNLLAKFITTCASIAVSTSRRNEAV 74
++ C + T+ Q+HA+ + +N LNL AK CA I
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK----CADIET--------- 442
Query: 75 SIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP 134
A +F T + L N M+ + + F +FR M + P
Sbjct: 443 -----ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ---------MQIEEIVP 488
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
+T+ +++K C G ++H +K F L+ YV + L+DMY K G L +A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMD 250
+ + VSWT +I GYT+ +A F M +R + + V + V L +
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 251 MAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
Q + + ++ ++V+ Y + G +E + L F+ + WNA++ G
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSV 366
++ EAL++F M ++ N T S + A ++ + G + + D
Sbjct: 669 QSGNNEEALRVFVRM-NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSET 727
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE 426
V ALI MYAKCG I A F E+ K SWNA+IN ++ +G EAL+ F+ MI
Sbjct: 728 EVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHS 787
Query: 427 GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDE 485
RPN +T++GVLSAC+H GLVD+G F++M +G++P+ EHY C+VD+L RAG L
Sbjct: 788 NVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSR 847
Query: 486 AENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYAT 545
A+ IQ MP + ++ + L AC K++ E +++E E + YVLL NLYA
Sbjct: 848 AKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAV 907
Query: 546 EKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
K+W + + MK +G KE S IEV F GD H
Sbjct: 908 SKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNH 951
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 191/403 (47%), Gaps = 14/403 (3%)
Query: 133 KPGGHTFTALVKGCTACMAT-REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+P T L++GC + EG ++H +K G + ++ L D Y+ G L A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMID----GY 243
KVFDEM ER+ +W +I + E LF M +V F+ +++ G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGS 200
Query: 244 VKLGCMDM--AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
V ++ A+ L+ +RD V+ ++ Y +NG V+ AR +FD + K+ +W AM
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
I G KN+ EA++LF +M + + P SVL A + +L++G + G +
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
V AL+ +Y G + A +F M +++ ++N LING + G ++A+E+F+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAG 481
M +G P+ T+ ++ AC+ G + G++ G A + G +++L +
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 482 CLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
++ A + + N ++ + L A G D+ + R+ R+
Sbjct: 439 DIETALDYFLETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 189/424 (44%), Gaps = 27/424 (6%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + FD +R F N MI + E F LF + T P TF
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVT---------PNEGTF 189
Query: 140 TALVKGCTACMATREGLE-VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+ +++ C + +E +H + G V L+D+Y + G + AR+VFD +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLF------DVMPERDVAAFNVMIDGYVKLGCMDMA 252
+ SW A+I G ++ +EA +LF +MP AF+ ++ K+ +++
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTP--YAFSSVLSACKKIESLEIG 307
Query: 253 QDLFDKMRDKNVISWT----SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ L + S T ++VS Y G++ SA +F M +++ T+N +I G +
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+A++LF+ M + +EP+ TL S++ A + G L G + + + + ++
Sbjct: 368 GYGEKAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKI 426
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
AL+++YAKC +I A F E + WN ++ + + + + +F M E
Sbjct: 427 EGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC--MVDLLGRAGCLDEA 486
PN+ T +L C G ++ G + + Q+ Y C ++D+ + G LD A
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQI--IKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 487 ENLI 490
+++
Sbjct: 545 WDIL 548
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/467 (32%), Positives = 246/467 (52%), Gaps = 12/467 (2%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+ FTA++ A + G ++H + +KNG + ++ ALV MY K L A K+FD
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMD------ 250
+R+ ++W+A++ GY++ G+ EA KLF M + I G + C D
Sbjct: 282 SGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN-ACSDICYLEE 340
Query: 251 ---MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
+ L ++++ + T++V Y + G + AR FD + E+++ W ++I G+ +
Sbjct: 341 GKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQ 400
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVR 367
N EAL L+R M +A + PN+ T+ SVL A + L L+LG + G + V
Sbjct: 401 NSDNEEALILYRRM-KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG 427
+ +AL MY+KCG + L+F P K+ SWNA+I+G + NG+ EALE+FE M+ EG
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
P+++T + ++SAC+H G V+ G F M + G+ P+++HY CMVDLL RAG L EA
Sbjct: 520 MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA 579
Query: 487 ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
+ I++ D + L AC + + + + + YV L +Y
Sbjct: 580 KEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTAL 639
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLE 593
R DVE V M+ G KEV CS IE+ ++ FV GD +H +E
Sbjct: 640 GRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/502 (24%), Positives = 214/502 (42%), Gaps = 96/502 (19%)
Query: 37 IHAFMLRNSVD---NNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEF 93
+H ++R + N+L F C +A A F+A +D
Sbjct: 36 VHGQIIRTGASTCIQHANVLVNFYAKCGKLA--------------KAHSIFNAIICKDVV 81
Query: 94 LCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
NS+IT + S +T+ + R M P +T + K ++ ++
Sbjct: 82 SWNSLITGYSQNGGISSSYTVMQLF------REMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
G + H + VK D+YV T+LV MY K G++ KVF M ER+ +W+ ++ GY
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 214 RCGDMSEARKLFDV-MPERD---------------------------------------- 232
G + EA K+F++ + E++
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 233 VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPE 292
VA N ++ Y K ++ A +FD D+N I+W++MV+GY QNG
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG-------------- 301
Query: 293 KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGW 352
+ EA+KLF M SA ++P+E T++ VL A +D+ L+ G
Sbjct: 302 -----------------ESLEAVKLFSRMF-SAGIKPSEYTIVGVLNACSDICYLEEGKQ 343
Query: 353 IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGR 412
+ F + + + +TAL+DMYAK G + AR F+ + E++ A W +LI+G+ N
Sbjct: 344 LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 403
Query: 413 AKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC 472
+EAL ++ M G PN+ TM VL AC+ ++ G++ G ++
Sbjct: 404 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 463
Query: 473 MVDLLGRAGCLDEAENLIQTMP 494
+ + + G L++ + + P
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTP 485
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 175/346 (50%), Gaps = 16/346 (4%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G VHG ++ G + A LV+ Y K G L A +F+ + + VSW ++I GY++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 215 CGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMD------------MAQDLFDKMRD- 261
G +S + + + R++ A +++ + Y G A L KM
Sbjct: 93 NGGISSSYTVMQLF--REMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSF 150
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
++ TS+V YC+ G VE +F MPE+N +TW+ M+ G+ + EA+K+F
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 322 LMSASV-EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
L ++ +VL ++A + LG I + L G V +S AL+ MY+KC
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
+ A +F+ ++ + +W+A++ G++ NG + EA+++F M G +P+E T++GVL+
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
AC+ ++EG++ + G + +VD+ +AGCL +A
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADA 376
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 203/453 (44%), Gaps = 47/453 (10%)
Query: 36 QIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
QIH ++N + + N L + C S+ NEA + FD++ R+
Sbjct: 242 QIHCITIKNGLLGFVALSNALVTMYSKCESL-------NEAC-------KMFDSSGDRNS 287
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMAT 152
++M+T + + E LF M KP +T ++ C+
Sbjct: 288 ITWSAMVTGYSQNGESLEAVKLFS---------RMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 153 REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGY 212
EG ++H +K GF L+ TALVDMY K G L ARK FD + ER WT++I GY
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 213 TRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW----- 267
+ D EA L+ M + + + +K C +A K + I
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLK-ACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 268 ----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
+++ + Y + G +E L+F P K++ +WNAMI G N Q EAL+LF EML
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML- 516
Query: 324 SASVEPNEVTLLSVLPAVADLGALDLGG-WIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
+ +EP++VT ++++ A + G ++ G + + + LD V ++D+ ++ G++
Sbjct: 517 AEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 383 GRARLLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE--ITMIGVL 439
A+ E + W L++ +G+ + + E ++ G R + + + G+
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIY 636
Query: 440 SACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC 472
+A G + + R +K M G++ ++ GC
Sbjct: 637 TA---LGRMRDVERVWKHMRANGVSKEV---GC 663
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 14/229 (6%)
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+ P+ TLL L + L G + G R ++ + L++ YAKCG++ +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 387 LLFEEMPEKETASWNALINGFAVNG---RAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
+F + K+ SWN+LI G++ NG + +++F M + PN T+ G+ A +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 444 HCGLVDEGRRCFK---AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGI 500
GR+ M FG I +V + +AG +++ + MP + N
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTY 185
Query: 501 ILSSFLFACGHFKDVSRAERVLRETVKMEKECA-GDYV---LLRNLYAT 545
S+ + V A +V ++ ++E + DYV +L +L AT
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 241/443 (54%), Gaps = 11/443 (2%)
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR 202
+K C G+ +HG+A+KNG D YVA +LV+MY + G + SA+KVFDE+ R+
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 203 VSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK---------LGCMDMAQ 253
V W ++ GY + E +LF +M + +A + + VK +G
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 254 DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHE 313
+ D++ S++ Y + +++AR +F+ ++N+ W +I G K ++ E
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALI 373
A LFR+ML S+ PN+ TL ++L + + LG+L G + G+ R ++ T+ I
Sbjct: 296 AFDLFRQML-RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFI 354
Query: 374 DMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
DMYA+CG I AR +F+ MPE+ SW+++IN F +NG +EAL+ F M + PN +
Sbjct: 355 DMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSV 414
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
T + +LSAC+H G V EG + F++M +G+ P+ EHY CMVDLLGRAG + EA++ I
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDN 474
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
MP + L AC K+V A + + + ME E + YVLL N+YA W V
Sbjct: 475 MPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMV 534
Query: 553 EDVKHMMKMRGSYKEVACSVIEV 575
V+ M ++G K V S EV
Sbjct: 535 NCVRRKMGIKGYRKHVGQSATEV 557
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 183/367 (49%), Gaps = 15/367 (4%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS--ERSRVSWTAVIVGYTR 214
+VH + +GF ++ + ++L + Y++ L A F+ + +R+R SW ++ GY++
Sbjct: 25 QVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSK 84
Query: 215 CGD--MSEARKLFDVMPER--DVAAFNVM--IDGYVKLGCMD---MAQDLFDKM-RDKNV 264
S+ L++ M V +FN++ I V LG ++ + L K DK+
Sbjct: 85 SKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDD 144
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
S+V Y Q G +ESA+ +FD +P +N W ++ G+ K + E +LF ++
Sbjct: 145 YVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC-LMRD 203
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA-RRKKLDGSVRVSTALIDMYAKCGEIG 383
+ + +TL+ ++ A ++ A +G + G + RR +D S + ++IDMY KC +
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 384 RARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
AR LFE ++ W LI+GFA RA EA ++F M+RE PN+ T+ +L +C+
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 444 HCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILS 503
G + G+ M GI ++ +D+ R G + A + MP + N I S
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWS 382
Query: 504 SFLFACG 510
S + A G
Sbjct: 383 SMINAFG 389
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 178/432 (41%), Gaps = 98/432 (22%)
Query: 37 IHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCN 96
IH ++N +D + + + A + S A++ FD R+ L
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES-----------AQKVFDEIPVRNSVLWG 179
Query: 97 SMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGL 156
++ + ++S+ +FR C M T T LVK C A + G
Sbjct: 180 VLMKGYL---KYSKDPEVFRLFC------LMRDTGLALDALTLICLVKACGNVFAGKVGK 230
Query: 157 EVHGVAVKNGFCLDL--YVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
VHGV+++ F +D Y+ +++DMYVK +L +ARK+F+ +R+ V WT +I G+ +
Sbjct: 231 CVHGVSIRRSF-IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 215 CGDMSEARKLF------DVMP---------------------------------ERDVAA 235
C EA LF ++P E D
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 236 FNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
F ID Y + G + MA+ +FD M ++NVISW+SM++ + NG E
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFE-------------- 395
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ- 354
EAL F +M S +V PN VT +S+L A + G + GW Q
Sbjct: 396 -----------------EALDCFHKM-KSQNVVPNSVTFVSLLSACSHSGNVK-EGWKQF 436
Query: 355 -GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGR 412
R + ++D+ + GEIG A+ + MP K AS W AL++ ++
Sbjct: 437 ESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKE 496
Query: 413 AKEALEVFEMMI 424
A E+ E ++
Sbjct: 497 VDLAGEIAEKLL 508
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 23/285 (8%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
++ +AR+ F+ + R+ + ++I+ + E F LFR + R + P
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES---------ILPN 311
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
T A++ C++ + R G VHG ++NG +D T+ +DMY + G + AR VFD
Sbjct: 312 QCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDM 251
M ER+ +SW+++I + G EA F M ++V F ++ G +
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 252 AQDLFDKM-RDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFT-WNAMIGGH 305
F+ M RD V+ + MV + G++ A+ D MP K + + W A++
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSAC 491
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV-ADLGALDL 349
+K+ A ++ ++L S+EP + ++ +L + AD G ++
Sbjct: 492 RIHKEVDLAGEIAEKLL---SMEPEKSSVYVLLSNIYADAGMWEM 533
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 272/553 (49%), Gaps = 45/553 (8%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +AR FD RD N+MI+ + E TL L R M
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL------RAMDSV------ 248
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +L+ CT G+ +H ++K+G +L+V+ L+D+Y +FG L +KVFD
Sbjct: 249 -TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ--D 254
M R +SW ++I Y + P R ++ F M ++ C+ +
Sbjct: 308 MYVRDLISWNSIIKAYE-----------LNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 255 LFDKMRD------------------KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
+ ++ D +++ ++V Y + G V+SAR +F+ +P ++
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVI 416
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WN +I G+ +N EA++++ M + N+ T +SVLPA + GAL G + G
Sbjct: 417 SWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
+ L V V T+L DMY KCG + A LF ++P + WN LI +G ++A
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 536
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVD 475
+ +F+ M+ EG +P+ IT + +LSAC+H GLVDEG+ CF+ M+ +GI P ++HYGCMVD
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVD 596
Query: 476 LLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGD 535
+ GRAG L+ A I++M + I + L AC +V + ++E E G
Sbjct: 597 MYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 656
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
+VLL N+YA+ +W V++++ + +G K S +EVD + F G+ H E +
Sbjct: 657 HVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 716
Query: 596 QLTLGQLWKHMKV 608
L L +K+
Sbjct: 717 YRELTALQAKLKM 729
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 232/463 (50%), Gaps = 33/463 (7%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEP---FTLFRDLCRGTATRTMTMTPFKPGG 136
AR FD RD + N MI+ + SE F+LF M + P
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF-----------MLSSGLTPDY 153
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
TF +++K AC +G ++H +A+K GF D+YVA +L+ +Y ++ +G+AR +FDE
Sbjct: 154 RTFPSVLK---ACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMID-----GYVKLGCMDM 251
M R SW A+I GY + G+ EA L + + D ++ G G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 252 AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ + + + +S ++ Y + G + + +FD M ++L +WN++I + N+QP
Sbjct: 271 SYSIKHGLESELFVS-NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK-LDGSVRVST 370
A+ LF+EM +S ++P+ +TL+S+ ++ LG + +QGF RK + +
Sbjct: 330 LRAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG-FR 429
A++ MYAK G + AR +F +P + SWN +I+G+A NG A EA+E++ +M EG
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
N+ T + VL AC+ G + +G + + G+ + + D+ G+ G L++A +L
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSL 508
Query: 490 IQTMPFDANGIILSSFLFACGHF-----KDVSRAERVLRETVK 527
+P N + ++ L AC F K V + +L E VK
Sbjct: 509 FYQIP-RVNSVPWNT-LIACHGFHGHGEKAVMLFKEMLDEGVK 549
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 168/342 (49%), Gaps = 38/342 (11%)
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM---- 228
++ LV++Y G + AR FD + R +W +I GY R G+ SE + F +
Sbjct: 88 ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 147
Query: 229 ---PERD-----VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDV 280
P+ + A +IDG K+ C+ + F M D V + S++ Y + V
Sbjct: 148 GLTPDYRTFPSVLKACRTVIDGN-KIHCLALK---FGFMWDVYVAA--SLIHLYSRYKAV 201
Query: 281 ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL---FREMLMSASVEPNEVTLLSV 337
+AR++FD MP +++ +WNAMI G+C++ EAL L R M + VT++S+
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM--------DSVTVVSL 253
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
L A + G + G I ++ + L+ + VS LID+YA+ G + + +F+ M ++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SWN++I + +N + A+ +F+ M +P+ +T+I + S + G + R ++
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI----RACRS 369
Query: 458 MEGFGI-----APQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
++GF + I +V + + G +D A + +P
Sbjct: 370 VQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 9/233 (3%)
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
+NV +V+ YC G+V AR FD + ++++ WN MI G+ + E ++ F
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
++S+ + P+ T SVL A + +D G I A + V V+ +LI +Y++
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTV--ID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP-NEITMIGVLS 440
+G AR+LF+EMP ++ SWNA+I+G+ +G AKEAL + G R + +T++ +LS
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL-----TLSNGLRAMDSVTVVSLLS 255
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
AC G + G G+ ++ ++DL G L + + + M
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 265/518 (51%), Gaps = 53/518 (10%)
Query: 102 HFAIRQFSEPFTLFRDLCRGTATRTMTMTP-------FKPGGHTFTALVKGCTACMATRE 154
H ++ +F + + RG+ + + + + PG + L+ AC+ R
Sbjct: 6 HLSLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPG---WVPLILRACACVVPRV 62
Query: 155 --GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGY 212
G +H ++K G C D+ V ++L+ MY K G + SARKVFDEM ER+ +W A+I GY
Sbjct: 63 VLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGY 122
Query: 213 TRCGD--------------------------------MSEARKLFDVMP--ERDVAAFNV 238
GD + +AR+LF+ MP ++V A++V
Sbjct: 123 MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV 182
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTW 298
M+ YV M+ A+ F+ + +KN W+ M+SGY + GDV AR +F + ++L W
Sbjct: 183 MLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N +I G+ +N +A+ F M EP+ VT+ S+L A A G LD+G +
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALE 418
+ ++ + VS ALIDMYAKCG++ A +FE + + A N++I+ A++G+ KEALE
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 419 VFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLG 478
+F M +P+EIT I VL+AC H G + EG + F M+ + P ++H+GC++ LLG
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 421
Query: 479 RAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDY-- 536
R+G L EA L++ M N +L + L AC D AE+V++ ++ Y
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSE 480
Query: 537 ---VLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
+ NLYA +RW E ++ M+ RG K S
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 32/259 (12%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAI-----------RQFSEPFTLFRDLCRGTATR--- 125
AR+FF+ +++ F+ + M++ +F I R F+ ++ L G A
Sbjct: 196 ARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYS 255
Query: 126 --------TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
M ++P T ++++ C G EVH + G L+ +V+ AL
Sbjct: 256 DDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNAL 315
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA--- 234
+DMY K G L +A VF+ +S RS ++I G EA ++F M D+
Sbjct: 316 IDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDE 375
Query: 235 -AFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDV-ESARLMFD 288
F ++ V G + +F +M+ + NV + ++ ++G + E+ RL+ +
Sbjct: 376 ITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 435
Query: 289 LMPEKNLFTWNAMIGGHCK 307
+ + N A++G CK
Sbjct: 436 MHVKPNDTVLGALLGA-CK 453
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 294/610 (48%), Gaps = 66/610 (10%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C + +Q+HA + + V+ + L+ K +T ++ + NEA SI+ ++
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNL----HNEAQSIIENS- 104
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
D H N +I ++ F E A + M +P T+ +
Sbjct: 105 ---DILHP---LPWNVLIASYAKNELFEEVIA---------AYKRMVSKGIRPDAFTYPS 149
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++K C + G VHG + + LYV AL+ MY +F +G AR++FD M ER
Sbjct: 150 VLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERD 209
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
VSW AVI Y G SEA +LFD M E V +N++ G ++ G A L
Sbjct: 210 AVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLIS 269
Query: 258 KMRD-KNVISWTSMVSG--------------------------------------YCQNG 278
+MR+ + +M+ G Y +
Sbjct: 270 RMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCK 329
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
D+ A ++F E +L TWN++I G+ + + EA L REML+ A +PN +TL S+L
Sbjct: 330 DLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV-AGFQPNSITLASIL 388
Query: 339 PAVADLGALDLGGWIQGFA-RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
P A + L G + RRK + +L+D+YAK G+I A+ + + M +++
Sbjct: 389 PLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDE 448
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
++ +LI+G+ G AL +F+ M R G +P+ +T++ VLSAC+H LV EG R F
Sbjct: 449 VTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMK 508
Query: 458 ME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS 516
M+ +GI P ++H+ CMVDL GRAG L +A+++I MP+ +G ++ L AC +
Sbjct: 509 MQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQ 568
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVD 576
+ + ++M+ E G YVL+ N+YA W+ + +V+ +M+ G K+ C+ I+ D
Sbjct: 569 IGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTD 628
Query: 577 GRFREFVAGD 586
F F GD
Sbjct: 629 SGFSLFSVGD 638
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/495 (33%), Positives = 249/495 (50%), Gaps = 17/495 (3%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M ++ F+ T +++ C G ++H A+++G D V +LVDMY K
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSA 317
Query: 187 LGSA---RKVFDEMSERSRVSWTAVIVGYTR-CGDMSEARKLFDVMPERDVAAFNVMIDG 242
GS RKVFD M + S +SWTA+I GY + C +EA LF M + N
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS 377
Query: 243 YVKLGCMDMAQ---------DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK 293
C +++ F + N S++S + ++ +E A+ F+ + EK
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
NL ++N + G C+N +A KL E + + + T S+L VA++G++ G I
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSE-ITERELGVSAFTFASLLSGVANVGSIRKGEQI 496
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
+ L + V ALI MY+KCG I A +F M + SW ++I GFA +G A
Sbjct: 497 HSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFA 556
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGC 472
LE F MI EG +PNE+T + +LSAC+H GLV EG R F +M E I P++EHY C
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYAC 616
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
MVDLL RAG L +A I TMPF A+ ++ +FL AC + + R+ ++++
Sbjct: 617 MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNE 676
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNL 592
Y+ L N+YA +W + +++ MK R KE CS IEV + +F GD H N
Sbjct: 677 PAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNA 736
Query: 593 EVIQLTLGQLWKHMK 607
I L +L +K
Sbjct: 737 HQIYDELDRLITEIK 751
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 186/410 (45%), Gaps = 22/410 (5%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TF++L+K C R G VH ++ D + +L+ +Y K G A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 198 ---SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAA----FNVMI-----DGYVK 245
+R VSW+A++ Y G +A K+F E + + +I +V
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 246 LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ-NGDVESARLMFDLMPEKNLFTWNAMIGG 304
+G + + + + +V S++ + + E+A +FD M E N+ TW MI
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ P EA++ F +M++S E ++ TL SV A A+L L LG + +A R L
Sbjct: 244 CMQMGFPREAIRFFLDMVLSG-FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD 302
Query: 365 SVRVSTALIDMYAKC---GEIGRARLLFEEMPEKETASWNALINGFAVN-GRAKEALEVF 420
V S L+DMYAKC G + R +F+ M + SW ALI G+ N A EA+ +F
Sbjct: 303 DVECS--LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLF 360
Query: 421 EMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGR 479
MI +G PN T AC + G++ G+A ++ + +
Sbjct: 361 SEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 480 AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
+ +++A+ +++ + N + ++FL + +A ++L E + E
Sbjct: 421 SDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 154/377 (40%), Gaps = 64/377 (16%)
Query: 208 VIVGYTRCGDMSEARKLFDVMPER-----DVAAFNVMIDGYVK-----LGCMDMAQDL-F 256
+I+ + GD+ A D+M D F+ ++ ++ LG + A+ + F
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 257 DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLM---PEKNLFTWNAMIGGHCKNKQPHE 313
D D + + S++S Y ++GD A +F+ M ++++ +W+AM+ + N + +
Sbjct: 92 DIEPDS--VLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK-KLDGSVRVSTAL 372
A+K+F E L V PN+ +V+ A ++ + +G GF + + V V +L
Sbjct: 150 AIKVFVEFLELGLV-PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 373 IDMYAKCGE--IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
IDM+ K GE A +F++M E +W +I G +EA+ F M+ GF
Sbjct: 209 IDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 431 NEITMIGVLSACNHC------------------------------------GLVDEGRRC 454
++ T+ V SAC G VD+ R+
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKV 327
Query: 455 FKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM----PFDANGIILSSFLFACG 510
F ME + + + + EA NL M + N SS ACG
Sbjct: 328 FDRMEDHSV---MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 511 HFKDVSRAERVLRETVK 527
+ D ++VL + K
Sbjct: 385 NLSDPRVGKQVLGQAFK 401
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 255/475 (53%), Gaps = 20/475 (4%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+++ C A E HG ++ D+ + L++ Y K G + AR+VFD M ERS
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERD-----------VAAFNVMIDGY--VKLGC 248
VSW +I YTR SEA +F M ++A V D KL C
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 249 MDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ + + D N+ T+++ Y + G ++ A +F+ M +K+ TW++M+ G+ +N
Sbjct: 187 LSVKTCI-----DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
K EAL L+R S+E N+ TL SV+ A ++L AL G + + +V V
Sbjct: 242 KNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+++ +DMYAKCG + + ++F E+ EK WN +I+GFA + R KE + +FE M ++G
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGM 360
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
PNE+T +LS C H GLV+EGRR FK M +G++P + HY CMVD+LGRAG L EA
Sbjct: 361 HPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAY 420
Query: 488 NLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEK 547
LI+++PFD I S L +C +K++ AE + ++E E AG++VLL N+YA K
Sbjct: 421 ELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANK 480
Query: 548 RWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
+W ++ + +++ K S I++ + F G+ H + I TL L
Sbjct: 481 QWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 22/339 (6%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR+ FD +R N+MI + R SE +F + M FK
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE---------MRNEGFKFSE 162
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T ++++ C E ++H ++VK L+LYV TAL+D+Y K G++ A +VF+
Sbjct: 163 FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 222
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
M ++S V+W++++ GY + + EA L+ +R N V C ++A +
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYR-RAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 257 DKMRD---------KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
K NV +S V Y + G + + ++F + EKNL WN +I G K
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK-LDGSV 366
+ +P E + LF +M + PNEVT S+L G ++ G R L +V
Sbjct: 342 HARPKEVMILFEKMQQDG-MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALI 404
+ ++D+ + G + A L + +P TAS W +L+
Sbjct: 401 VHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 272/544 (50%), Gaps = 34/544 (6%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +A + F+ +RD N+M++ + F+LFR+ M + P
Sbjct: 103 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFRE---------MRLNEITPDS 153
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T L++ + + + +H V ++ G + + VA + Y K G L SA+ VF+
Sbjct: 154 VTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEA 213
Query: 197 MS--ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
+ +R+ VSW ++ Y+ G+ +A L+ +M + F + ++ L +
Sbjct: 214 IDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE---FKPDLSTFINLAASCQNPE 270
Query: 255 LFDKMR-----------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
+ R D+++ + + +S Y ++ D SARL+FD+M + +W MI
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G+ + EAL LF M+ S +P+ VTLLS++ G+L+ G WI R +
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDA---RADIY 386
Query: 364 G----SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEV 419
G +V + ALIDMY+KCG I AR +F+ PEK +W +I G+A+NG EAL++
Sbjct: 387 GCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKL 446
Query: 420 FEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLG 478
F MI ++PN IT + VL AC H G +++G F M+ + I+P ++HY CMVDLLG
Sbjct: 447 FSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLG 506
Query: 479 RAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVL 538
R G L+EA LI+ M + I + L AC ++V AE+ +E + A YV
Sbjct: 507 RKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVE 566
Query: 539 LRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLT 598
+ N+YA W ++ +MK R K SVI+V+G+ F G++ H EVI T
Sbjct: 567 MANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFT 626
Query: 599 LGQL 602
L L
Sbjct: 627 LNGL 630
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 185/405 (45%), Gaps = 39/405 (9%)
Query: 110 EPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCL 169
E LFR++ RG F+P TF + K C VH +K+ F
Sbjct: 35 ESLLLFREMKRGG---------FEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWS 85
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP 229
D++V TA VDM+VK + A KVF+ M ER +W A++ G+ + G +A LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR--------DKNVISWTSMVSGYCQNGDVE 281
++ +V + ++ + + L + M D V + +S Y + GD++
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 282 SARLMFDLMP--EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
SA+L+F+ + ++ + +WN+M + + +A L+ ML +P+ T +++
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-EFKPDLSTFINLAA 264
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
+ + L G I A D + I MY+K + ARLLF+ M + S
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVS 324
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
W +I+G+A G EAL +F MI+ G +P+ +T++ ++S C G ++ G+
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK------- 377
Query: 460 GFGIAPQIEHYGC----------MVDLLGRAGCLDEAENLIQTMP 494
I + + YGC ++D+ + G + EA ++ P
Sbjct: 378 --WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 9/200 (4%)
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
WN I P E+L LFREM EPN T V A A L + +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
+ V V TA +DM+ KC + A +FE MPE++ +WNA+++GF +G +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI----APQIEHYGCM 473
+F M P+ +T++ ++ + + ++ + +AM GI Q+
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 474 VDLLGRAGCLDEAENLIQTM 493
+ G+ G LD A+ + + +
Sbjct: 195 ISTYGKCGDLDSAKLVFEAI 214
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 138/351 (39%), Gaps = 41/351 (11%)
Query: 24 QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
C++ +T+T IH+ + D ++ + FI+ S+ + S AR
Sbjct: 265 SCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM-------YSKSEDTCS----ARLL 313
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALV 143
FD R MI+ + E LF M + KP T +L+
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALF---------HAMIKSGEKPDLVTLLSLI 364
Query: 144 KGCTACMATREGLEVHGVAVKNGFCLD-LYVATALVDMYVKFGVLGSARKVFDEMSERSR 202
GC + G + A G D + + AL+DMY K G + AR +FD E++
Sbjct: 365 SGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTV 424
Query: 203 VSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLGCMDMAQDLFDK 258
V+WT +I GY G EA KLF M + D F ++ G ++ + F
Sbjct: 425 VTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHI 484
Query: 259 MRDKNVIS-----WTSMVSGYCQNGDVESA-RLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
M+ IS ++ MV + G +E A L+ ++ + + W A++ CK H
Sbjct: 485 MKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA-CK---IH 540
Query: 313 EALKLFREMLMSA-SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
+K+ + S ++EP P V G GFAR + +
Sbjct: 541 RNVKIAEQAAESLFNLEPQMAA-----PYVEMANIYAAAGMWDGFARIRSI 586
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 282/562 (50%), Gaps = 43/562 (7%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-RDLCRGTATRTMTMTPFKPG 135
++ A+ FD + + N+MIT + + LF R + G ++++ G
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS----G 387
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
ALVKG + EGL+++G+A+K+ LD+ VA A +DMY K L A +VFD
Sbjct: 388 VFRACALVKGLS------EGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMID----GYVKLG 247
EM R VSW A+I + + G E LF M E D F ++ G + G
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYG 501
Query: 248 CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLM----------------FDLMP 291
M++ + N S++ Y + G +E A + + M
Sbjct: 502 -MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 292 EKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
K L +WN++I G+ +Q +A LF M M + P++ T +VL A+L +
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM-MEMGITPDKFTYATVLDTCANLASA 619
Query: 348 DLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGF 407
LG I +K+L V + + L+DMY+KCG++ +RL+FE+ ++ +WNA+I G+
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQ 466
A +G+ +EA+++FE MI E +PN +T I +L AC H GL+D+G F M+ +G+ PQ
Sbjct: 680 AHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQ 739
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG-HFKDVSRAERVLRET 525
+ HY MVD+LG++G + A LI+ MPF+A+ +I + L C H +V AE
Sbjct: 740 LPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAAL 799
Query: 526 VKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
++++ + + Y LL N+YA W V D++ M+ KE CS +E+ F+ G
Sbjct: 800 LRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVG 859
Query: 586 DYLHSNLEVIQLTLGQLWKHMK 607
D H E I LG ++ MK
Sbjct: 860 DKAHPRWEEIYEELGLIYSEMK 881
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 200/420 (47%), Gaps = 23/420 (5%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A FF+ RD NSM++ + + + +F D+ R + G TF
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR---------EGIEFDGRTF 183
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++K C+ T G+++HG+ V+ G D+ A+AL+DMY K + +VF + E
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK---------LGCMD 250
++ VSW+A+I G + +S A K F M + + + ++ LG
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
A L ++ T+ + Y + +++ A+++FD N ++NAMI G+ + +
Sbjct: 304 HAHALKSDFAADGIVR-TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
+AL LF LMS+ + +E++L V A A + L G I G A + L V V+
Sbjct: 363 GFKALLLFHR-LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
A IDMY KC + A +F+EM ++ SWNA+I NG+ E L +F M+R P
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 481
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC-MVDLLGRAGCLDEAENL 489
+E T +L AC G + G ++ G+A GC ++D+ + G ++EAE +
Sbjct: 482 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASN-SSVGCSLIDMYSKCGMIEEAEKI 539
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 50/400 (12%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
F+ + K C A G + H + +GF +V L+ +Y SA VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
R VSW +I GY++ DM +A F++MP RDV ++N M+ GY++ G + ++F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 258 KMR---------------------------------------DKNVISWTSMVSGYCQNG 278
M D +V++ ++++ Y +
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 279 D-VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
VES R+ F +PEKN +W+A+I G +N ALK F+EM + ++ SV
Sbjct: 230 RFVESLRV-FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM-QKVNAGVSQSIYASV 287
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
L + A L L LGG + A + V TA +DMYAKC + A++LF+
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
S+NA+I G++ +AL +F ++ G +EI++ GV AC + EG + +
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-- 405
Query: 458 MEGFGIAPQIEHYGCM----VDLLGRAGCLDEAENLIQTM 493
G I + C+ +D+ G+ L EA + M
Sbjct: 406 --GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 189/411 (45%), Gaps = 54/411 (13%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTC-ASIAVSTSRRNEAVSIVRHARRF 83
C K ++ LQI+ +++S+ + C A+ A+ + +A++ A R
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLS---------LDVCVANAAIDMYGKCQALA---EAFRV 439
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALV 143
FD +RD N++I H + E LF + R + +P TF +++
Sbjct: 440 FDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLR---------SRIEPDEFTFGSIL 490
Query: 144 KGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR- 202
K CT + G+E+H VK+G + V +L+DMY K G++ A K+ +R+
Sbjct: 491 KACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 203 -------------------VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVM 239
VSW ++I GY +A+ LF M E D + +
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 240 IDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
+D L + + + ++ K +V +++V Y + GD+ +RLMF+ ++
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQ 354
TWNAMI G+ + + EA++LF M++ +++PN VT +S+L A A +G +D G +
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILE-NIKPNHVTFISILRACAHMGLIDKGLEYFY 728
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALI 404
R LD + + ++D+ K G++ RA L EMP E + W L+
Sbjct: 729 MMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 173/380 (45%), Gaps = 38/380 (10%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+ ++++ C A R G ++H A+K+ F D V TA +DMY K + A+ +FD
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSE 343
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK 258
+R S+ A+I GY++ +A LF + + + + G + C + + L +
Sbjct: 344 NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFR-ACA-LVKGLSEG 401
Query: 259 MRDKNVISWTSM------------VSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC 306
++ + +S+ + G CQ + A +FD M ++ +WNA+I H
Sbjct: 402 LQIYGLAIKSSLSLDVCVANAAIDMYGKCQA--LAEAFRVFDEMRRRDAVSWNAIIAAHE 459
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSV 366
+N + +E L LF ML S +EP+E T S+L A G+L G I + + +
Sbjct: 460 QNGKGYETLFLFVSMLRS-RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNS 517
Query: 367 RVSTALIDMYAKCGEIGRARLL----------------FEEMPEKET----ASWNALING 406
V +LIDMY+KCG I A + E+M K SWN++I+G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
+ + ++++A +F M+ G P++ T VL C + G++ + +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSD 637
Query: 467 IEHYGCMVDLLGRAGCLDEA 486
+ +VD+ + G L ++
Sbjct: 638 VYICSTLVDMYSKCGDLHDS 657
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 25/186 (13%)
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
+I+ Y+K ++ +A F MP ++ SWN++++G+ NG + +++EVF M REG +
Sbjct: 120 MINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFD 179
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLD------- 484
T +L C+ G M+ GI ++ GC D++ + LD
Sbjct: 180 GRTFAIILKVCSFLEDTSLG------MQIHGIVVRV---GCDTDVVAASALLDMYAKGKR 230
Query: 485 --EAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
E+ + Q +P + N + S+ + C +S A + +E M+K AG + +++
Sbjct: 231 FVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKE---MQKVNAG---VSQSI 283
Query: 543 YATEKR 548
YA+ R
Sbjct: 284 YASVLR 289
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 162/476 (34%), Positives = 251/476 (52%), Gaps = 44/476 (9%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD--- 226
+LY +V YVK G+L AR VFD M ER VSW +++GY + G++ EA +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 227 -----------------VMPERD------------VAAF--NV-----MIDGYVKLGCMD 250
+ R VA F NV +ID Y K G M+
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
A+ FD+M K++ WT+++SGY + GD+E+A +F MPEKN +W A+I G+ +
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
+ AL LFR+M+ + V+P + T S L A A + +L G I G+ R + + V +
Sbjct: 292 GNRALDLFRKMI-ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVIS 350
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEK-ETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
+LIDMY+K G + + +F +K + WN +I+ A +G +AL + + MI+ +
Sbjct: 351 SLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
PN T++ +L+AC+H GLV+EG R F++M GI P EHY C++DLLGRAGC E
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 489 LIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKR 548
I+ MPF+ + I ++ L C + ++ E +K++ E + Y+LL ++YA +
Sbjct: 471 KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGK 530
Query: 549 WTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD--YLHSNLEVIQLTLGQL 602
W VE ++ +MK R KE A S IE++ + F D + H+ E I L L
Sbjct: 531 WELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 149/322 (46%), Gaps = 32/322 (9%)
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
N +I Y+K G A +FD+M +N+ SW +MVSGY ++G + AR++FD MPE+++
Sbjct: 86 NHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WN M+ G+ ++ HEAL ++E S ++ NE + +L A L L G
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSG-IKFNEFSFAGLLTACVKSRQLQLNRQAHGQ 204
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEI-----------------------GRARL------ 387
+V +S ++ID YAKCG++ G A+L
Sbjct: 205 VLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAA 264
Query: 388 --LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
LF EMPEK SW ALI G+ G AL++F MI G +P + T L A
Sbjct: 265 EKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASI 324
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
+ G+ M + P ++D+ ++G L+ +E + + + + ++
Sbjct: 325 ASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTM 384
Query: 506 LFACGHFKDVSRAERVLRETVK 527
+ A +A R+L + +K
Sbjct: 385 ISALAQHGLGHKALRMLDDMIK 406
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 52/374 (13%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR FD+ +RD N+M+ + E +++ R + K +F
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR---------SGIKFNEFSF 182
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
L+ C + + HG + GF ++ ++ +++D Y K G + SA++ FDEM+
Sbjct: 183 AGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
+ WT +I GY + GDM A KLF MPE++ ++ +I GYV+ G + A DLF KM
Sbjct: 243 KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM 302
Query: 260 ---------------------------------------RDKNVISWTSMVSGYCQNGDV 280
N I +S++ Y ++G +
Sbjct: 303 IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 281 ESARLMFDLMPEK-NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
E++ +F + +K + WN MI ++ H+AL++ +M+ V+PN TL+ +L
Sbjct: 363 EASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI-KFRVQPNRTTLVVILN 421
Query: 340 AVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKET 397
A + G ++ G W + + + LID+ + G EEMP E +
Sbjct: 422 ACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDK 481
Query: 398 ASWNALINGFAVNG 411
WNA++ ++G
Sbjct: 482 HIWNAILGVCRIHG 495
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 257/492 (52%), Gaps = 46/492 (9%)
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALV--------DMYVKFGVL 187
G+T+ L+ T C RE ++H +K G D A+ ++ DM + V
Sbjct: 24 GNTYLRLID--TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVF 81
Query: 188 ----------------GSARKVFDEMS--------------ERSRVSWTAVIVGYTRCGD 217
G +R F EM+ + R+++ +V Y R G
Sbjct: 82 TRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQ 141
Query: 218 MSEARKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSG 273
+ R+L ++ E D N M+ YV GC+ A +F M +V++W SM+ G
Sbjct: 142 ARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMG 201
Query: 274 YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
+ + G ++ A+ +FD MP++N +WN+MI G +N + +AL +FREM V+P+ T
Sbjct: 202 FAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM-QEKDVKPDGFT 260
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
++S+L A A LGA + G WI + R + + + V TALIDMY KCG I +FE P
Sbjct: 261 MVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAP 320
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+K+ + WN++I G A NG + A+++F + R G P+ ++ IGVL+AC H G V
Sbjct: 321 KKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADE 380
Query: 454 CFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHF 512
F+ M E + I P I+HY MV++LG AG L+EAE LI+ MP + + +I SS L AC
Sbjct: 381 FFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKI 440
Query: 513 KDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSV 572
+V A+R + K++ + YVLL N YA+ + + + + +MK R KEV CS
Sbjct: 441 GNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSS 500
Query: 573 IEVDGRFREFVA 584
IEVD EF++
Sbjct: 501 IEVDFEVHEFIS 512
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 199/426 (46%), Gaps = 66/426 (15%)
Query: 24 QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
QC T+ L QIHA +++ + ++ ++ + C + + S + +A
Sbjct: 34 QCS---TMRELKQIHASLIKTGLISDTVTASRVLAFCCA----------SPSDMNYAYLV 80
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSE-PFTLFRD-LCRGTATRTMTMTPFKPGGHTFTA 141
F + ++ F+ N++I F+ F E ++F D LC + KP T+ +
Sbjct: 81 FTRINHKNPFVWNTIIRG-FSRSSFPEMAISIFIDMLCSSPSV--------KPQRLTYPS 131
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+ K R+G ++HG+ +K G D ++ ++ MYV G L A ++F M
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD 191
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
V+W ++I+G+ +CG + +A+ LFD MP+R+ ++N MI G+V+ G A D+F +M++
Sbjct: 192 VVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 262 KNV---------------------------------------ISWTSMVSGYCQNGDVES 282
K+V I T+++ YC+ G +E
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 283 ARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
+F+ P+K L WN+MI G N A+ LF E L + +EP+ V+ + VL A A
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSE-LERSGLEPDSVSFIGVLTACA 370
Query: 343 DLGALDLGG-WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASW 400
G + + + + ++ S++ T ++++ G + A L + MP E++T W
Sbjct: 371 HSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIW 430
Query: 401 NALING 406
++L++
Sbjct: 431 SSLLSA 436
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/493 (32%), Positives = 251/493 (50%), Gaps = 42/493 (8%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC-- 215
+H VK G +A LV++Y K G A +VFDEM R ++W +V+ +
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANL 84
Query: 216 ----------------------------------GDMSEARKL---FDVMP-ERDVAAFN 237
G + R++ F V D +
Sbjct: 85 SGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKS 144
Query: 238 VMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFT 297
++D Y K G ++ A+ +FD +R KN ISWT+MVSGY ++G E A +F ++P KNL++
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYS 204
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
W A+I G ++ + EA +F EM + + L S++ A A+L A G + G
Sbjct: 205 WTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLV 264
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
D V +S ALIDMYAKC ++ A+ +F M ++ SW +LI G A +G+A++AL
Sbjct: 265 IALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDL 476
+++ M+ G +PNE+T +G++ AC+H G V++GR F++M + +GI P ++HY C++DL
Sbjct: 325 ALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDL 384
Query: 477 LGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK-ECAGD 535
LGR+G LDEAENLI TMPF + ++ L AC R+ V K +
Sbjct: 385 LGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST 444
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
Y+LL N+YA+ W V + + + K+ S +EV F AG+ H E I
Sbjct: 445 YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDI 504
Query: 596 QLTLGQLWKHMKV 608
L +L + M++
Sbjct: 505 FRLLKKLEEEMRI 517
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 214/481 (44%), Gaps = 67/481 (13%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFF 84
C +T+TT +HA +++ I C +A + HA + F
Sbjct: 13 CARNRTLTTAKALHAHIVKLG-----------IVQCCPLANTLVNVYGKCGAASHALQVF 61
Query: 85 DATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
D RD S++T A+ Q + + + + +P F+ALVK
Sbjct: 62 DEMPHRDHIAWASVLT---ALNQAN-----LSGKTLSVFSSVGSSSGLRPDDFVFSALVK 113
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
C + G +VH + + + D V ++LVDMY K G+L SA+ VFD + ++ +S
Sbjct: 114 ACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS 173
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR---- 260
WTA++ GY + G EA +LF ++P +++ ++ +I G+V+ G A +F +MR
Sbjct: 174 WTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
Query: 261 ------------------------------------DKNVISWTSMVSGYCQNGDVESAR 284
D V +++ Y + DV +A+
Sbjct: 234 DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAK 293
Query: 285 LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
+F M +++ +W ++I G ++ Q +AL L+ +M+ S V+PNEVT + ++ A + +
Sbjct: 294 DIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMV-SHGVKPNEVTFVGLIYACSHV 352
Query: 345 GALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNA 402
G ++ G + Q + + S++ T L+D+ + G + A L MP + +W A
Sbjct: 353 GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAA 412
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNE----ITMIGVLSACNHCGLVDEGRRCFKAM 458
L++ GR + + + + ++ F+ + I + + ++ + G V E RR M
Sbjct: 413 LLSACKRQGRGQMGIRIADHLV-SSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Query: 459 E 459
E
Sbjct: 472 E 472
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/624 (29%), Positives = 291/624 (46%), Gaps = 79/624 (12%)
Query: 20 LDLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVR 78
+ LLQ C +K+ QIH ++LR +++N ++ C S+ V SR + +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESN-------VSMCNSLIVMYSRNGK----LE 141
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTL---------------FRDLCRGTA 123
+R+ F++ R+ NS+++++ + + L + L G A
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYA 201
Query: 124 TR-----------TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLY 172
++ M + KP + ++L++ + G +HG ++N D+Y
Sbjct: 202 SKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVY 261
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD 232
V T L+DMY+K G L AR +FD+M ++
Sbjct: 262 VETTLIDMYIKTGYL-------------------------------PYARMVFDMMDAKN 290
Query: 233 VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFD 288
+ A+N ++ G + A+ L +M + + I+W S+ SGY G E A +
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 289 LMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
M EK N+ +W A+ G KN ALK+F +M V PN T+ ++L + L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEEGVGPNAATMSTLLKILGCL 409
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
L G + GF RK L V+TAL+DMY K G++ A +F + K ASWN ++
Sbjct: 410 SLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCML 469
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGI 463
G+A+ GR +E + F +M+ G P+ IT VLS C + GLV EG + F M +GI
Sbjct: 470 MGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGI 529
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLR 523
P IEH CMVDLLGR+G LDEA + IQTM + I +FL +C +D+ AE +
Sbjct: 530 IPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWK 589
Query: 524 ETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFV 583
+E + +Y+++ NLY+ RW DVE ++++M+ + S I++D F
Sbjct: 590 RLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFY 649
Query: 584 AGDYLHSNLEVIQLTLGQLWKHMK 607
A H + I L +L MK
Sbjct: 650 AEGKTHPDEGDIYFELYKLVSEMK 673
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 283 ARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
A +FD MP+++ WN ++ + ++ +A++LFREM S + + + T++ +L +
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGA-KAYDSTMVKLLQVCS 100
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNA 402
+ G I G+ R L+ +V + +LI MY++ G++ +R +F M ++ +SWN+
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNS 160
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
+++ + G +A+ + + M G +P+ +T +LS GL + K M+ G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 463 IAPQIEHYGCMVDLLGRAGCL 483
+ P ++ + G L
Sbjct: 221 LKPSTSSISSLLQAVAEPGHL 241
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 349 LGGWIQGFARRKKLDGS-VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGF 407
LG I G ++ LD S RV +A + Y +C +G A LF+EMP+++ +WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQI 467
+G ++A+E+F M G + + TM+ +L C++ EGR+ + G+ +
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSF 505
++ + R G L+ + + +M + ILSS+
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 282/595 (47%), Gaps = 88/595 (14%)
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
RD + N+MIT ++ ++ C+ M FKP TF +++ G A
Sbjct: 111 RDTVMYNAMIT---GFSHNNDGYSAINLFCK------MKHEGFKPDNFTFASVLAG-LAL 160
Query: 150 MATREG--LEVHGVAVKNGFCLDLYVATALVDMYVKFG----VLGSARKVFDEMSERSR- 202
+A E ++ H A+K+G V+ ALV +Y K +L SARKVFDE+ E+
Sbjct: 161 VADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDER 220
Query: 203 -------------------------------VSWTAVIVGYTRCGDMSEARKLFDVMPE- 230
V++ A+I GY G EA ++ M
Sbjct: 221 SWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS 280
Query: 231 -------------------------RDVAAF------------NVMIDGYVKLGCMDMAQ 253
+ V A+ N ++ Y K G D A+
Sbjct: 281 GIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEAR 340
Query: 254 DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHE 313
+F+KM K+++SW +++SGY +G + A+L+F M EKN+ +W MI G +N E
Sbjct: 341 AIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEE 400
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALI 373
LKLF M EP + + + A LGA G + D S+ ALI
Sbjct: 401 GLKLFSCM-KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 374 DMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
MYAKCG + AR +F MP ++ SWNALI +G EA++V+E M+++G RP+ I
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRI 519
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
T++ VL+AC+H GLVD+GR+ F +ME + I P +HY ++DLL R+G +AE++I++
Sbjct: 520 TLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
+PF I + L C ++ + + E G Y+LL N++A +W +V
Sbjct: 580 LPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEV 639
Query: 553 EDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
V+ +M+ RG KEVACS IE++ + F+ D H E + + L L K M+
Sbjct: 640 ARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMR 694
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 199/479 (41%), Gaps = 112/479 (23%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
VHG + GF ++ L+D+Y K L AR++FDE+SE +++ T ++ GY GD
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 218 MSEARKLFDVMP--ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMV 271
++ AR +F+ P RD +N MI G+ A +LF KM+ + ++ S++
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 272 SGYCQNGDVE----------------------------------------SARLMFDLMP 291
+G D E SAR +FD +
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 292 EKNLFTW--------------------------------NAMIGGHCKNKQPHEALKLFR 319
EK+ +W NAMI G+ EAL++ R
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
M+ S+ +E +E T SV+ A A G L LG + + R++ D S +L+ +Y KC
Sbjct: 276 RMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKC 333
Query: 380 GEIGRARLLFEEMPEKETASWNALINGF-------------------------------A 408
G+ AR +FE+MP K+ SWNAL++G+ A
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
NG +E L++F M REGF P + G + +C G G++ + G +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
++ + + G ++EA + +TMP + + ++ + A G + A V E +K
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+HA++LR + F + S+ + +EA R F+ +D
Sbjct: 307 QVHAYVLRRE-----DFSFHFDNSLVSLYYKCGKFDEA-------RAIFEKMPAKDLVSW 354
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTP----------------------FK 133
N++++ + + E +F+++ M M F+
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P + F+ +K C A G + H +K GF L AL+ MY K GV+ AR+V
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCM 249
F M VSW A+I + G +EA +++ M ++ D ++ G +
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 250 DMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMPEK-NLFTWNAMIG 303
D + FD M I + ++ C++G A + + +P K W A++
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 304 G 304
G
Sbjct: 595 G 595
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 286/568 (50%), Gaps = 40/568 (7%)
Query: 21 DLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH 79
LLQ C + +Q HA ++++ ++ + N+ ++ + +R
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG----------MRE 115
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
RR FD +D SM++ + ++ + +F + M F + F
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVF-----------VEMVSFGLDANEF 164
Query: 140 T--ALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T + VK C+ R G HGV + +GF + ++++ L +Y AR+VFDEM
Sbjct: 165 TLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM 224
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE-----RDVAAFNVMIDGYVKLGCMDMA 252
E + WTAV+ +++ EA LF M D + F ++ L +
Sbjct: 225 PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQG 284
Query: 253 QDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+++ K+ NV+ +S++ Y + G V AR +F+ M +KN +W+A++GG+C+N
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+ +A+++FREM E + +VL A A L A+ LG I G R+ G+V V
Sbjct: 345 GEHEKAIEIFREM-----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ALID+Y K G I A ++ +M + +WNA+++ A NGR +EA+ F M+++G
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
+P+ I+ I +L+AC H G+VDEGR F M + +GI P EHY CM+DLLGRAG +EAE
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 488 NLIQTMPFDANGIILSSFLFACGHFKDVSR-AERVLRETVKMEKECAGDYVLLRNLYATE 546
NL++ + + L C D SR AER+ + +++E + YVLL N+Y
Sbjct: 520 NLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAI 579
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIE 574
R D +++ +M RG K V S I+
Sbjct: 580 GRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 169/366 (46%), Gaps = 17/366 (4%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV-LGSARKVFDEM 197
+ +L++ C + G++ H VK+G D V +L+ +Y K G + R+VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
+ +SWT+++ GY + +A ++F M + A + VK C ++ +
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK-ACSELGEVRLG 182
Query: 258 KMRDKNVIS----WTSMVSG-----YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ VI+ W +S Y N + AR +FD MPE ++ W A++ KN
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
EAL LF M + P+ T +VL A +L L G I G + +V V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
++L+DMY KCG + AR +F M +K + SW+AL+ G+ NG ++A+E+F M
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----- 357
Query: 429 RPNEITMIG-VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
++ G VL AC V G+ G + ++DL G++GC+D A
Sbjct: 358 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 488 NLIQTM 493
+ M
Sbjct: 418 RVYSKM 423
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 284/583 (48%), Gaps = 34/583 (5%)
Query: 35 LQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRD 91
LQ+H +++N +D + N L C + VR AR FD T +
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGN--------------VRKARILFDKTEVKS 259
Query: 92 EFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMA 151
NSMI+ + A E +F +M + + +F +++K C
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFY---------SMRLNYVRLSESSFASVIKLCANLKE 310
Query: 152 TREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS-ERSRVSWTAVIV 210
R ++H VK GF D + TAL+ Y K + A ++F E+ + VSWTA+I
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 211 GYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS 266
G+ + EA LF M + V ++V++ + ++ + +++
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTV 430
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
T+++ Y + G VE A +F + +K++ W+AM+ G+ + + A+K+F E L
Sbjct: 431 GTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE-LTKGG 489
Query: 327 VEPNEVTLLSVLPAVADLGA-LDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRA 385
++PNE T S+L A A + G GFA + +LD S+ VS+AL+ MYAK G I A
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 386 RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+F+ EK+ SWN++I+G+A +G+A +AL+VF+ M + + + +T IGV +AC H
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 446 GLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSS 504
GLV+EG + F M IAP EH CMVDL RAG L++A +I+ MP A I +
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRT 669
Query: 505 FLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGS 564
L AC K + + M+ E + YVLL N+YA W + V+ +M R
Sbjct: 670 ILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNV 729
Query: 565 YKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
KE S IEV + F+AGD H + I + L L +K
Sbjct: 730 KKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 147/296 (49%), Gaps = 10/296 (3%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G ++H +K GF D+ V T+LVD Y+K RKVFDEM ER+ V+WT +I GY R
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 215 CGDMSEARKLFDVMPERDV--------AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS 266
E LF M AA V+ + V + + + DK +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
S+++ Y + G+V AR++FD K++ TWN+MI G+ N EAL +F M ++
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY- 290
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
V +E + SV+ A+L L + + + TAL+ Y+KC + A
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 387 LLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
LF+E+ SW A+I+GF N +EA+++F M R+G RPNE T +L+A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 142/297 (47%), Gaps = 35/297 (11%)
Query: 184 FGVLGSAR-----KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF----DVMPERDVA 234
FG + S+R +FD+ R R S+ +++ G++R G EA++LF + E D +
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW---------TSMVSGYCQNGDVESARL 285
F+ ++ L +LF + I + TS+V Y + + + R
Sbjct: 95 IFSSVLKVSATL-----CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
+FD M E+N+ TW +I G+ +N E L LF M + +PN T + L +A+ G
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM-QNEGTQPNSFTFAAALGVLAEEG 208
Query: 346 ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALIN 405
G + + LD ++ VS +LI++Y KCG + +AR+LF++ K +WN++I+
Sbjct: 209 VGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS 268
Query: 406 GFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN-----------HCGLVDEG 451
G+A NG EAL +F M R +E + V+ C HC +V G
Sbjct: 269 GYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 274 YCQNGDVESARL-----MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
YC G V S+RL +FD P ++ ++ +++ G ++ + EA +LF + +E
Sbjct: 33 YC-FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLN-IHRLGME 90
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL 388
+ SVL A L G + + V V T+L+D Y K R +
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
F+EM E+ +W LI+G+A N E L +F M EG +PN T L G+
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
G + + G+ I +++L + G + +A L
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 193/676 (28%), Positives = 312/676 (46%), Gaps = 119/676 (17%)
Query: 19 CLDLLQCKSKKTITTLLQIHA-FMLRNSVDNNLNLLAKFITTCASIAVSTSRRN--EAVS 75
CL QC+ Q+HA +L + + + +L A I+ A + + RN E VS
Sbjct: 66 CLTAQQCR---------QVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVS 116
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+V + D L NS++ + + + L+R G R +T
Sbjct: 117 LVLLS----------DLRLWNSILKANVSHGLYENALELYR----GMRQRGLT-----GD 157
Query: 136 GHTFTALVKGCTACMATREGL--EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
G+ +++ C R GL H ++ G +L+V L+ +Y K G +G A +
Sbjct: 158 GYILPLILRACR--YLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNL 215
Query: 194 FDEMSERSRVSWTAVIVG-----------------------------------YTRCGDM 218
F EM R+R+SW +I G +++CG
Sbjct: 216 FVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKF 275
Query: 219 SEARKLFDVMP---------------------------------------ERDVAAFNVM 239
+ K F +M E + + N +
Sbjct: 276 EDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNAL 335
Query: 240 IDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPE------- 292
I Y K G + A+ LF ++R+K + SW S+++ + G ++ A +F + E
Sbjct: 336 IHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 293 -KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
N+ TW ++I G + ++L+ FR+M S V N VT+ +L A+L AL+LG
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFS-KVLANSVTICCILSICAELPALNLGR 454
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNG 411
I G R + ++ V AL++MYAKCG + L+FE + +K+ SWN++I G+ ++G
Sbjct: 455 EIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHG 514
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHY 470
A++AL +F+ MI GF P+ I ++ VLSAC+H GLV++GR F +M FG+ PQ EHY
Sbjct: 515 FAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHY 574
Query: 471 GCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK 530
C+VDLLGR G L EA +++ MP + +L + L +C K+V AE + + +E
Sbjct: 575 ACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEP 634
Query: 531 ECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHS 590
E G Y+LL N+Y+ RW + +V+ + K + K S IEV + +F +G + S
Sbjct: 635 ERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQS 694
Query: 591 NLEVIQLTLGQLWKHM 606
E I L L HM
Sbjct: 695 EFETIYPVLEDLVSHM 710
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 269/544 (49%), Gaps = 22/544 (4%)
Query: 75 SIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP 134
++ ++ + FD +RD N++I+ + + + LF M + F+P
Sbjct: 156 NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFG---------RMESSGFEP 206
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
+ T + C+ + G E+H VK GF LD YV +ALVDMY K L AR+VF
Sbjct: 207 NSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVF 266
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
+M +S V+W ++I GY GD ++ + M + + + C
Sbjct: 267 QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTS-ILMACSRSRNL 325
Query: 255 LFDKMRDKNVISWT---------SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
L K VI S++ Y + G+ A +F + +WN MI +
Sbjct: 326 LHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSY 385
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+A++++ +M+ S V+P+ VT SVLPA + L AL+ G I +L+
Sbjct: 386 ISVGNWFKAVEVYDQMV-SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+ +AL+DMY+KCG A +F +P+K+ SW +I+ + +G+ +EAL F+ M +
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQK 504
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLD 484
G +P+ +T++ VLSAC H GL+DEG + F M +GI P IEHY CM+D+LGRAG L
Sbjct: 505 FGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLL 564
Query: 485 EAENLIQTMPFDA-NGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
EA +IQ P + N +LS+ AC + S +R+ R V+ + A Y++L NLY
Sbjct: 565 EAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLY 624
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
A+ + W V+ MK G K+ CS IE+ + F A D H E + L L
Sbjct: 625 ASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLS 684
Query: 604 KHMK 607
HM+
Sbjct: 685 GHME 688
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 95/477 (19%)
Query: 81 RRFFDATHKRDEFLCNSMITTHF------AIRQFSEPFTLFRD------LCRGTATRTM- 127
+R +RD LC S+I +F + R E F + D L G + +M
Sbjct: 28 QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMF 87
Query: 128 --TMTPFK---------PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
T+ FK P TF ++K A G +H + VK+G+ D+ VA++
Sbjct: 88 HDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASS 147
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP------- 229
LV MY KF + ++ +VFDEM ER SW VI + + G+ +A +LF M
Sbjct: 148 LVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPN 207
Query: 230 --------------------------------ERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
E D + ++D Y K C+++A+++F
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 258 KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
KM K++++W SM+ GY GD +S +++
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKS-------------------------------CVEI 296
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
M++ + P++ TL S+L A + L G +I G+ R ++ + V+ +LID+Y
Sbjct: 297 LNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 378 KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
KCGE A +F + + SWN +I+ + G +A+EV++ M+ G +P+ +T
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
VL AC+ +++G++ ++ + ++D+ + G EA + ++P
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 300/596 (50%), Gaps = 33/596 (5%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L QC +++I+ + I A ML++ ++ S V S + + +AR
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAEIS---------GSKLVDASLK---CGDIDYAR 119
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ FD +R NS+I R+ E ++R M P +T ++
Sbjct: 120 QVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYR---------LMITNNVLPDEYTLSS 170
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCL-DLYVATALVDMYVKFGVLGSARKVFDEMSER 200
+ K + +E HG+AV G + +++V +ALVDMYVKFG A+ V D + E+
Sbjct: 171 VFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEK 230
Query: 201 SRVSWTAVIVGYTRCGDMSEARKLFD------VMPERDVAAFNVMIDGYVK-LGCMDMAQ 253
V TA+IVGY++ G+ +EA K F V P A ++ G +K +G +
Sbjct: 231 DVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 254 DLFDKMR-DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
L K + + S TS+++ Y + V+ + +F + N +W ++I G +N +
Sbjct: 291 GLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREE 350
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
AL FR+M M S++PN TL S L ++L + G I G + D + L
Sbjct: 351 MALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGL 409
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
ID+Y KCG ARL+F+ + E + S N +I +A NG +EAL++FE MI G +PN+
Sbjct: 410 IDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPND 469
Query: 433 ITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
+T++ VL ACN+ LV+EG F + I +HY CMVDLLGRAG L+EAE ++ T
Sbjct: 470 VTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAE-MLTT 528
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
+ + ++ + L AC + V AER+ R+ +++E G +L+ NLYA+ +W V
Sbjct: 529 EVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRV 588
Query: 553 EDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD-YLHSNLEVIQLTLGQLWKHMK 607
++K MK K A S +E++ F+AGD + H N E I L +L K K
Sbjct: 589 IEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSK 644
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 183/617 (29%), Positives = 290/617 (47%), Gaps = 36/617 (5%)
Query: 4 ESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASI 63
E P+R L +C +K + QIH FM+R F+
Sbjct: 49 EENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKG----------FLDDSPRA 98
Query: 64 AVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
S ++R A F + +RD F N++I+ F + P
Sbjct: 99 GTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISG-FVVN--GSPLDAME------T 148
Query: 124 TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK 183
R M P +TF +L+KG A M + +VHG+A K GF D YV + LV Y K
Sbjct: 149 YREMRANGILPDKYTFPSLLKGSDA-MELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 184 FGVLGSARKVFDEMSERS-RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNV 238
F + A+KVFDE+ +R V W A++ GY++ +A +F M E V
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 239 MIDGYVKLGCMDMAQDL----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
++ + G +D + + +++ +++ Y ++ +E A +F+ M E++
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
LFTWN+++ H L LF ML S + P+ VTL +VLP L +L G I
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPDIVTLTTVLPTCGRLASLRQGREIH 386
Query: 355 GFARRKKL----DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVN 410
G+ L + + +L+DMY KCG++ AR++F+ M K++ASWN +ING+ V
Sbjct: 387 GYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQ 446
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEH 469
+ AL++F M R G +P+EIT +G+L AC+H G ++EGR ME + I P +H
Sbjct: 447 SCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDH 506
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
Y C++D+LGRA L+EA L + P N ++ S L +C + A + ++E
Sbjct: 507 YACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELE 566
Query: 530 KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
E G YVL+ N+Y ++ +V DV+ M+ + K CS I + F G+ H
Sbjct: 567 PEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Query: 590 SNLEVIQLTLGQLWKHM 606
+ I L + HM
Sbjct: 627 PEFKSIHDWLSLVISHM 643
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 288/590 (48%), Gaps = 34/590 (5%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+H ++L++ NL IT+ I + R + A + FD+ +R+
Sbjct: 27 QVHCYLLKSGSGLNL------ITSNYLIDMYCKCREPLM-----AYKVFDSMPERNVVSW 75
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
+++++ H +LF ++ R P TF+ +K C A +G
Sbjct: 76 SALMSGHVLNGDLKGSLSLFSEMGR---------QGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
L++HG +K GF + + V +LVDMY K G + A KVF + +RS +SW A+I G+
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 216 GDMSEARKLFDVMPERDVA------AFNVMIDGYVKLGCMDMAQDLFDKMR------DKN 263
G S+A F +M E ++ ++ G + + + + +
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 264 VISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
S+V Y + G + SAR FD + EK + +W+++I G+ + + EA+ LF+ L
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR-LQ 305
Query: 324 SASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIG 383
+ + + L S++ AD L G +Q A + V +++DMY KCG +
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 384 RARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
A F EM K+ SW +I G+ +G K+++ +F M+R P+E+ + VLSAC+
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACS 425
Query: 444 HCGLVDEGRRCF-KAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIIL 502
H G++ EG F K +E GI P++EHY C+VDLLGRAG L EA++LI TMP N I
Sbjct: 426 HSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIW 485
Query: 503 SSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
+ L C D+ + V + ++++ + +YV++ NLY W + + + + ++
Sbjct: 486 QTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIK 545
Query: 563 GSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEIIY 612
G KE S +E++ F +G+ H VIQ TL + + ++ E+ Y
Sbjct: 546 GLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGY 595
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 1/166 (0%)
Query: 329 PNE-VTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
PN+ L+S+L G D GG + + + ++ S LIDMY KC E A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+F+ MPE+ SW+AL++G +NG K +L +F M R+G PNE T L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+++G + G +E +VD+ + G ++EAE + + +
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 35/309 (11%)
Query: 4 ESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASI 63
E P + TL S L C S I QIH F++R+ + A+I
Sbjct: 206 ERPDEFTLTSL-------LKACSSTGMIYAGKQIHGFLVRSGFH---------CPSSATI 249
Query: 64 AVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
S + AR+ FD ++ +S+I + +F E LF+ L
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL----Q 305
Query: 124 TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK 183
+ F ++++ R+G ++ +AVK L+ V ++VDMY+K
Sbjct: 306 ELNSQIDSF-----ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 184 FGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVM 239
G++ A K F EM + +SWT VI GY + G ++ ++F M E D + +
Sbjct: 361 CGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 420
Query: 240 IDGYVKLGCMDMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMPEK- 293
+ G + ++LF K+ + + I + +V + G ++ A+ + D MP K
Sbjct: 421 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 480
Query: 294 NLFTWNAMI 302
N+ W ++
Sbjct: 481 NVGIWQTLL 489
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 184/642 (28%), Positives = 289/642 (45%), Gaps = 108/642 (16%)
Query: 50 LNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFS 109
+++L + + AS+A S + AR+ FD + D N+M+T++ +
Sbjct: 1 MSVLVRLTSKIASLAKSGR--------IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQ 52
Query: 110 EPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCL 169
E LF L + KP ++FTA++ C + + G ++ + +++GFC
Sbjct: 53 EAIALFTQL---------RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCA 103
Query: 170 DLYVATALVDMYVKFGVLGSARKVFD---------------------------------E 196
L V +L+DMY K SA KVF E
Sbjct: 104 SLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE 163
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD------------------------ 232
M +R +W +I G+ CG + LF M E +
Sbjct: 164 MPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVY 223
Query: 233 ----------------VAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ 276
V A N ++ Y KLG D A + + +SW S++ +
Sbjct: 224 GRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMK 283
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
G+ E A +F L PEKN+ TW MI G+ +N +AL+ F EM M + V+ + +
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM-MKSGVDSDHFAYGA 342
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
VL A + L L G I G G V AL+++YAKCG+I A F ++ K+
Sbjct: 343 VLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKD 402
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
SWN ++ F V+G A +AL++++ MI G +P+ +T IG+L+ C+H GLV+EG F+
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 457 AM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPF----DANGIILSSFLFACG- 510
+M + + I +++H CM+D+ GR G L EA++L T +N + L AC
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACST 522
Query: 511 HF-----KDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY 565
H+ ++VS+ ++ + +M +VLL NLY + RW + EDV+ M RG
Sbjct: 523 HWHTELGREVSKVLKIAEPSEEMS------FVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
Query: 566 KEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
K CS IEV + FV GD H LE + TL L M+
Sbjct: 577 KTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 260/509 (51%), Gaps = 24/509 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + FD KRD N+MI+ ++ LF D+ R + P T
Sbjct: 157 AIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR--------IDGLSPNLSTI 208
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+ A REG VHG + GF DL V T ++D+Y K + AR+VFD +
Sbjct: 209 VGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFK 268
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD-VAAFNVMIDGYVKLGCMDMAQDLFD- 257
++ V+W+A+I GY + EA ++F M D VA + G + +GC DL
Sbjct: 269 KNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFG-DLSGG 327
Query: 258 ------KMRDKNVISWT---SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
++ ++ T +++S Y + G + A F + K++ ++N++I G N
Sbjct: 328 RCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVN 387
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+P E+ +LF EM S + P+ TLL VL A + L AL G G+ + +
Sbjct: 388 CRPEESFRLFHEMRTSG-IRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSI 446
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
AL+DMY KCG++ A+ +F+ M +++ SWN ++ GF ++G KEAL +F M G
Sbjct: 447 CNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGV 506
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAME--GFGIAPQIEHYGCMVDLLGRAGCLDEA 486
P+E+T++ +LSAC+H GLVDEG++ F +M F + P+I+HY CM DLL RAG LDEA
Sbjct: 507 NPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEA 566
Query: 487 ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
+ + MPF+ + +L + L AC +K+ V ++ + E VLL N Y+
Sbjct: 567 YDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSNTYSAA 625
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIEV 575
+RW D ++ + K RG K S ++V
Sbjct: 626 ERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 217/457 (47%), Gaps = 24/457 (5%)
Query: 51 NLLAKFITTCAS-IAVSTSRRNEAVSIVRHARRFFDAT-HKRDEFLCNSMITTHFAIRQF 108
+LL + +T +S + V+ +R + + V AR FD H R + ++ +A F
Sbjct: 24 HLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDF 83
Query: 109 SEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFC 168
+E DL M + +P +T+ ++K C A +G +H + F
Sbjct: 84 AEKAL---DL-----YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFA 135
Query: 169 LDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
D+YV TALVD Y K G L A KVFDEM +R V+W A+I G++ +++ LF M
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
Query: 229 PERDVAAFNV-----MIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGD 279
D + N+ M + G + + + +++ T ++ Y ++
Sbjct: 196 RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC 255
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS---ASVEPNEVTLLS 336
+ AR +FDL +KN TW+AMIGG+ +N+ EA ++F +ML++ A V P + L
Sbjct: 256 IIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL-- 313
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
+L A G L G + +A + + V +I YAK G + A F E+ K+
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
S+N+LI G VN R +E+ +F M G RP+ T++GVL+AC+H + G C
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 457 AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G A ++D+ + G LD A+ + TM
Sbjct: 434 YCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 37/349 (10%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDM---YVKFGVLGSARKVFD 195
F +L++ C G +H +K L L +T LV++ Y + AR VFD
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRS--LTLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 196 EMSER--SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV--------------AAFNVM 239
E+ + ++W +I Y +A L+ M V A +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 240 IDG---YVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
DG + + C D A D++ T++V Y + G++E A +FD MP++++
Sbjct: 120 DDGKLIHSHVNCSDFATDMY---------VCTALVDFYAKCGELEMAIKVFDEMPKRDMV 170
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
WNAMI G + + + LF +M + PN T++ + PA+ GAL G + G+
Sbjct: 171 AWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGY 230
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
R + V T ++D+YAK I AR +F+ +K +W+A+I G+ N KEA
Sbjct: 231 CTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 417 LEV-FEMMIREGFRPNEITMIG-VLSACNHCGLVDEGR--RCFKAMEGF 461
EV F+M++ + IG +L C G + GR C+ GF
Sbjct: 291 GEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 274/540 (50%), Gaps = 31/540 (5%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
A FD +RD+ NS+I+ + + EP L + R + +T + G
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG----LNLTTYALG--- 253
Query: 139 FTALVKGCTACMATREG-----LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
+++K C C+ EG + +H K G D+ V TAL+DMY K G L A K+
Sbjct: 254 --SVLKAC--CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDM-----SEARKLFDVMPERDV----AAFNVMIDGYV 244
F M ++ V++ A+I G+ + ++ SEA KLF M R + + F+V++
Sbjct: 310 FSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACS 369
Query: 245 KLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNA 300
++ + + + N S ++++ Y G E F ++++ +W +
Sbjct: 370 AAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTS 429
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
MI H +N+Q A LFR+ L S+ + P E T+ ++ A AD AL G IQG+A +
Sbjct: 430 MIDCHVQNEQLESAFDLFRQ-LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS 488
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF 420
+D V T+ I MYAK G + A +F E+ + A+++A+I+ A +G A EAL +F
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 421 EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGR 479
E M G +PN+ +GVL AC H GLV +G + F+ M+ + I P +H+ C+VDLLGR
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 480 AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLL 539
G L +AENLI + F + + + L +C +KD +RV +++E E +G YVLL
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Query: 540 RNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTL 599
N+Y + E+V+ +M+ RG KE A S I + + F D H + ++I L
Sbjct: 669 HNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 198/482 (41%), Gaps = 60/482 (12%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ FD +R+ NS+I+ + + + + LF + K T+
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREAN---------LKLDKFTY 151
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+ C G +HG+ V NG +++ L+DMY K G L A +FD E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK- 258
R +VSW ++I GY R G E L M + + +K C+++ + +K
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 259 ----------MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK- 307
+ +++ T+++ Y +NG ++ A +F LMP KN+ T+NAMI G +
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 308 ----NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
++ EA KLF +M +EP+ T VL A + L+ G I +
Sbjct: 332 DEITDEASSEAFKLFMDM-QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
+ +ALI++YA G F +++ ASW ++I+ N + + A ++F +
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRR-----------CFKAMEGFGIA-------- 464
RP E T+ ++SAC + G + F +++ I+
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 465 ------------PQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFAC 509
P + Y M+ L + G +EA N+ ++M N L AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 510 GH 511
H
Sbjct: 571 CH 572
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 147/343 (42%), Gaps = 73/343 (21%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G HG +K+ LY+ L++MY K LG AR++FD M ER+ +S+ ++I GYT+
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 215 CGDMSEARKLFDVMPE---------------------------------------RDVAA 235
G +A +LF E + V
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 236 FNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
NV+ID Y K G +D A LFD+ +++ +SW S++SGY + G E + M L
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+G +L + + NE G ++ G I
Sbjct: 246 NLTTYALG----------------SVLKACCINLNE-------------GFIEKGMAIHC 276
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGF-----AVN 410
+ + ++ + V TAL+DMYAK G + A LF MP K ++NA+I+GF +
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ EA ++F M R G P+ T VL AC+ ++ GR+
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQ 379
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 117/228 (51%), Gaps = 12/228 (5%)
Query: 274 YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
YC+ ++ AR +FD MPE+N+ ++N++I G+ + +A++LF E A+++ ++ T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEA-REANLKLDKFT 150
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
L + LDLG + G L V + LIDMY+KCG++ +A LF+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC-----GLV 448
E++ SWN+LI+G+ G A+E L + M R+G + VL AC C G +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFI 268
Query: 449 DEGR--RCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
++G C+ A G+ I ++D+ + G L EA L MP
Sbjct: 269 EKGMAIHCYTA--KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 322 LMSASVEPNEVTLLS-----VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMY 376
+S+ +P L S + A G++ LG G + L+ + + L++MY
Sbjct: 33 FLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMY 92
Query: 377 AKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
KC E+G AR LF+ MPE+ S+N+LI+G+ G ++A+E+F + ++ T
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
G L C +D G + G++ Q+ ++D+ + G LD+A +L
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 20/212 (9%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C + KT+ QIHA + +N+ ++ + + I A + +
Sbjct: 365 LKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST-----------EDGM 413
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ F +T K+D SMI H Q F LFR L + +P +T +
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS---------SHIRPEEYTVSL 464
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++ C A G ++ G A+K+G V T+ + MY K G + A +VF E+
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDV 233
+++A+I + G +EA +F+ M +
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGI 556
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 160/524 (30%), Positives = 262/524 (50%), Gaps = 21/524 (4%)
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
R F R+ ++IT ++ E T F ++ R + ++ T +TF
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR---SEELSDT------YTFAI 214
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+K C + G +H + GF L VA +L MY + G + +F+ MSER
Sbjct: 215 ALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERD 274
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
VSWT++IV Y R G +A + F M V N + C +++ ++ +
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP-NEQTFASMFSACASLSRLVWGEQLH 333
Query: 262 KNVISW---------TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
NV+S SM+ Y G++ SA ++F M +++ +W+ +IGG+C+
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
E K F M S + +P + L S+L ++ ++ G + A L+ + V ++L
Sbjct: 394 EGFKYFSWMRQSGT-KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSL 452
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
I+MY+KCG I A ++F E + S A+ING+A +G++KEA+++FE ++ GFRP+
Sbjct: 453 INMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDS 512
Query: 433 ITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
+T I VL+AC H G +D G F M E + + P EHYGCMVDLL RAG L +AE +I
Sbjct: 513 VTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 492 TMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTD 551
M + + ++ ++ L AC D+ R R ++++ CA V L N+Y++ +
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEE 632
Query: 552 VEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
+V+ MK +G KE S I++ FV+GD H E I
Sbjct: 633 AANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDI 676
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 187/423 (44%), Gaps = 26/423 (6%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+R AR+ FD D S+I + E LF +A R + P
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILF------SAMRVVDH-AVSPDT 108
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+ ++K C G +H AVK +YV ++L+DMY + G + + +VF E
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE----RDVAAFNVMIDGYVKLGCMDMA 252
M R+ V+WTA+I G G E F M D F + + C +
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK-----ACAGLR 223
Query: 253 QDLFDKMRDKNVI---------SWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
Q + K +VI S+ + Y + G+++ +F+ M E+++ +W ++I
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIV 283
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
+ + Q +A++ F +M ++ V PNE T S+ A A L L G + L+
Sbjct: 284 AYKRIGQEVKAVETFIKM-RNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
S+ VS +++ MY+ CG + A +LF+ M ++ SW+ +I G+ G +E + F M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCL 483
+ G +P + + +LS + +++ GR+ FG+ ++++ + G +
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 484 DEA 486
EA
Sbjct: 463 KEA 465
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 138/322 (42%), Gaps = 11/322 (3%)
Query: 182 VKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PERDVAA 235
+ G L +AR+VFD+M VSWT++I Y + EA LF M D +
Sbjct: 51 INAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 236 FNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMP 291
+V++ + + + L +++S +S++ Y + G ++ + +F MP
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
+N TW A+I G + E L F EM S + + T L A A L + G
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGK 229
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNG 411
I + ++ V+ +L MY +CGE+ LFE M E++ SW +LI + G
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
+ +A+E F M PNE T + SAC + G + + G+ +
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
M+ + G L A L Q M
Sbjct: 350 SMMKMYSTCGNLVSASVLFQGM 371
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 225/384 (58%), Gaps = 4/384 (1%)
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
E D+ N +I Y A+ LFD+M KN+++W S++ Y ++GDV SARL+FD
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
M E+++ TW++MI G+ K + ++AL++F +M+ S + NEVT++SV+ A A LGAL+
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS--WNALINGF 407
G + + L +V + T+LIDMYAKCG IG A +F KET + WNA+I G
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQI 467
A +G +E+L++F M P+EIT + +L+AC+H GLV E FK+++ G P+
Sbjct: 320 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKS 379
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
EHY CMVD+L RAG + +A + I MP G +L + L C + ++ AE V ++ ++
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 528 MEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD- 586
++ G YV L N+YA K++ ++ M+ +G K S++++DG F+A D
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDK 499
Query: 587 -YLHSNLEVIQLTLGQLWKHMKVE 609
+ HS+ L L W ++ V+
Sbjct: 500 THFHSDKIYAVLQLTGAWMNLDVD 523
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 216/502 (43%), Gaps = 76/502 (15%)
Query: 24 QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
QCKS ++ L +IH ++ + F++ S + +S + V +A +F
Sbjct: 17 QCKS---MSELYKIHTLLITLGLSEE----EPFVSQTLSFSALSSSGD-----VDYAYKF 64
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALV 143
+ N F IR FS + + + M P T+ L+
Sbjct: 65 LSKLSDPPNYGWN------FVIRGFSNSRNPEKSI---SVYIQMLRFGLLPDHMTYPFLM 115
Query: 144 KGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV 203
K + + G +H VK+G DL++ L+ MY F SARK+FDEM ++ V
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 204 SWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM---- 259
+W +++ Y + GD+ AR +FD M ERDV ++ MIDGYVK G + A ++FD+M
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMG 235
Query: 260 -----------------------RDK-------------NVISWTSMVSGYCQNGDVESA 283
R K VI TS++ Y + G + A
Sbjct: 236 SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA 295
Query: 284 RLMF--DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
+F + E + WNA+IGG + E+L+LF +M S ++P+E+T L +L A
Sbjct: 296 WSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES-KIDPDEITFLCLLAAC 354
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVS---TALIDMYAKCGEIGRARLLFEEMPEKETA 398
+ G L W F + K G+ S ++D+ ++ G + A EMP K T
Sbjct: 355 SH-GGLVKEAW--HFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTG 411
Query: 399 S-WNALINGFAVNGRAKEALEVFEMMIREGFRP-NEITMIGVLSACNHCGLVDEGRRCFK 456
S AL+NG +G + A V + +I +P N+ +G+ + R +
Sbjct: 412 SMLGALLNGCINHGNLELAETVGKKLIE--LQPHNDGRYVGLANVYAINKQFRAARSMRE 469
Query: 457 AMEGFGIAPQIEHYGCMVDLLG 478
AME G+ H ++DL G
Sbjct: 470 AMEKKGVKKIAGH--SILDLDG 489
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/645 (25%), Positives = 307/645 (47%), Gaps = 81/645 (12%)
Query: 40 FMLRNSVDNNLNLLAKFITTCAS----IAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
ML+ + N +A + CAS IA + R+ + + +R + TH F+C
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV----QRSWLQTHV---FVC 266
Query: 96 NSMITTHFAIRQFSEPFTLF-----RDLCR------GTATRTMTMTPFK----------- 133
NS+++ + + + E +LF +DL G A+ F+
Sbjct: 267 NSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDV 326
Query: 134 -PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCL-DLYVATALVDMYVKFGVLGSAR 191
P T +++ C G E+H +++ + L D V AL+ Y +FG +A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 192 KVFDEMSERSRVSWTAVIVGYTR--------------------------------CGDMS 219
F MS + +SW A++ + C ++
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 220 EARKLFDVM----------PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK-NVISWT 268
K+ +V E + N ++D Y K G ++ A +F + ++ ++S+
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYN 506
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
S++SGY +G + A+++F M +L TW+ M+ + ++ P+EA+ +FRE + + +
Sbjct: 507 SLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE-IQARGMR 565
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL 388
PN VT++++LP A L +L L G+ R L G +R+ L+D+YAKCG + A +
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSV 624
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
F+ ++ + A++ G+AV+GR KEAL ++ M +P+ + + +L+AC H GL+
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLI 684
Query: 449 DEGRRCFKAMEGF-GIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLF 507
+G + + ++ G+ P +E Y C VDL+ R G LD+A + + MP + N I + L
Sbjct: 685 QDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLR 744
Query: 508 ACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKE 567
AC + + V ++ E + G++VL+ N+YA + +W V +++++MK + K
Sbjct: 745 ACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKP 804
Query: 568 VACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEIIY 612
CS +EVDG+ FV+GD H + I + L+ MK +++
Sbjct: 805 AGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKEPVVF 849
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 20/352 (5%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFG-VLGSAR 191
KP TF ++ C + G +H +K G D V ALV MY KFG + A
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
FD ++++ VSW A+I G++ M++A + F +M + I + + C M
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPV-CASM 237
Query: 252 AQDLF---DKMRDKNVI--SW--------TSMVSGYCQNGDVESARLMFDLMPEKNLFTW 298
+++ + V+ SW S+VS Y + G +E A +F M K+L +W
Sbjct: 238 DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSW 297
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA- 357
N +I G+ N + +A +LF ++ V P+ VT++S+LP A L L G I +
Sbjct: 298 NVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
R L V ALI YA+ G+ A F M K+ SWNA+++ FA + + + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
+ ++ E + +T++ +L C + +G K + G+ + + H
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFCINV----QGIGKVKEVHGYSVKAGLLH 465
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 158/354 (44%), Gaps = 33/354 (9%)
Query: 105 IRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVK 164
+RQF + F L ++ F F +VK C + G +HG K
Sbjct: 4 LRQFVQNFRL--------------LSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFK 49
Query: 165 NGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT-RCGDMSEARK 223
G V+ ++++MY K + +K+F +M V W V+ G + CG E +
Sbjct: 50 LGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMR 107
Query: 224 LFDVM-----PERDVAAFNVMIDGYVKLG----CMDMAQDLFDKMRDKNVISWTSMVSGY 274
F M P+ F +++ V+LG M + +K+ + ++VS Y
Sbjct: 108 FFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMY 167
Query: 275 CQNGDV-ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
+ G + A FD + +K++ +WNA+I G +N +A + F ML + EPN T
Sbjct: 168 AKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT-EPNYAT 226
Query: 334 LLSVLPAVADLG---ALDLGGWIQGF-ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ +VLP A + A G I + +R L V V +L+ Y + G I A LF
Sbjct: 227 IANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLF 286
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG-FRPNEITMIGVLSAC 442
M K+ SWN +I G+A N +A ++F ++ +G P+ +T+I +L C
Sbjct: 287 TRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 200/467 (42%), Gaps = 70/467 (14%)
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTL---FRDLCRGTATRTMTMTPFKPGGHTF 139
F DA D +++ + I FSE + FR C M P +P T
Sbjct: 174 FPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC------LMLKEPTEPNYATI 227
Query: 140 TALVKGCTAC---MATREGLEVHGVAVKNGFC-LDLYVATALVDMYVKFGVLGSARKVFD 195
++ C + +A R G ++H V+ + ++V +LV Y++ G + A +F
Sbjct: 228 ANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFT 287
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
M + VSW VI GY + +A +LF +++ + DV+ +V I + + +
Sbjct: 288 RMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI-----ISILPVCAQ 342
Query: 255 LFDKMRDKNVISW--------------TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNA 300
L D K + S+ +++S Y + GD +A F LM K++ +WNA
Sbjct: 343 LTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNA 402
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
++ + + + L L +L A + + VT+LS+L ++ + + G++ +
Sbjct: 403 ILDAFADSPKQFQFLNLLHHLLNEA-ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 361 KL---DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET-ASWNALINGFAVNGR---- 412
L + ++ AL+D YAKCG + A +F + E+ T S+N+L++G+ +G
Sbjct: 462 GLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDA 521
Query: 413 ---------------------------AKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
EA+ VF + G RPN +T++ +L C
Sbjct: 522 QMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQL 581
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
+ R+C + G+ I G ++D+ + G L A ++ Q+
Sbjct: 582 ASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQS 627
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 256/561 (45%), Gaps = 88/561 (15%)
Query: 16 ERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVS 75
ERK L LL T T L +IHA +LR+ + + LLA FI+
Sbjct: 4 ERKLLRLLH--GHNTRTRLPEIHAHLLRHFLHGSNLLLAHFIS----------------- 44
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+C S+ + +A R FS P
Sbjct: 45 ------------------ICGSLSNSDYANRVFSHIQN--------------------PN 66
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
F A++K + E L G D Y L+ L + V
Sbjct: 67 VLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHG 126
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
E+ + G+ R G + +++ Y G M AQ +
Sbjct: 127 EL----------IRTGFHRLGKIRIG-----------------VVELYTSGGRMGDAQKV 159
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
FD+M ++NV+ W M+ G+C +GDVE +F M E+++ +WN+MI K + EAL
Sbjct: 160 FDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREAL 219
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL-DGSVRVSTALID 374
+LF EM+ +P+E T+++VLP A LG LD G WI A L + V AL+D
Sbjct: 220 ELFCEMI-DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG-FRPNEI 433
Y K G++ A +F +M + SWN LI+G AVNG+ + +++F+ MI EG PNE
Sbjct: 279 FYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEA 338
Query: 434 TMIGVLSACNHCGLVDEGRRCFK-AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
T +GVL+ C++ G V+ G F ME F + + EHYG MVDL+ R+G + EA ++
Sbjct: 339 TFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKN 398
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
MP +AN + S L AC DV AE E VK+E +G+YVLL NLYA E RW DV
Sbjct: 399 MPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDV 458
Query: 553 EDVKHMMKMRGSYKEVACSVI 573
E V+ +MK K S I
Sbjct: 459 EKVRTLMKKNRLRKSTGQSTI 479
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 193/629 (30%), Positives = 290/629 (46%), Gaps = 53/629 (8%)
Query: 11 LWSTAER-----KCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITT------ 59
L S AER K L L KS +T L H L + A F +T
Sbjct: 16 LKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVF 75
Query: 60 CASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC 119
++ V ++ + I AR+ FD + D N++I+ + R+ LF+
Sbjct: 76 SYNVIVKAYAKDSKIHI---ARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK--- 129
Query: 120 RGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVD 179
M F+ G T + L+ C C ++H +V GF V A V
Sbjct: 130 ------RMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 180 MYVKFGVLGSARKVFDEMSE-RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNV 238
Y K G+L A VF M E R VSW ++IV Y G E K + E F
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAY---GQHKEGAKALALYKEMIFKGFK- 237
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARL------------- 285
ID + ++ L D + + +G+ QN V S +
Sbjct: 238 -IDMFTLASVLNALTSL-DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 286 ----MFDLMPEKNLFTWNAMIGGHCKNKQ-PHEALKLFREMLMSASVEPNEVTLLSVLPA 340
+F + +L WN MI G+ N++ EA+K FR+M P++ + + V A
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM-QRIGHRPDDCSFVCVTSA 354
Query: 341 VADLGALDLGGWIQGFARRKKLDGS-VRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
++L + I G A + + + + V+ ALI +Y K G + AR +F+ MPE S
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM- 458
+N +I G+A +G EAL +++ M+ G PN+IT + VLSAC HCG VDEG+ F M
Sbjct: 415 FNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMK 474
Query: 459 EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRA 518
E F I P+ EHY CM+DLLGRAG L+EAE I MP+ + ++ L AC K+++ A
Sbjct: 475 ETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALA 534
Query: 519 ERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGR 578
ER E + M+ A YV+L N+YA ++W ++ V+ M+ + K+ CS IEV +
Sbjct: 535 ERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKK 594
Query: 579 FREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
FVA D+ H + + L ++ K MK
Sbjct: 595 KHVFVAEDWSHPMIREVNEYLEEMMKKMK 623
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 275/543 (50%), Gaps = 25/543 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ FD +RD + +I ++ ++ LF+++ T +P T
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT--------EPDCVTV 229
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCL-DLYVATALVDMYVKFGVLGSARKVFDEMS 198
T+++K CT G VHG +++ GF L D++V +L+DMY K + SA +VFDE +
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK--------LGCMD 250
R+ VSW +++ G+ EA ++F +M + V V + ++ L C
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
+ + + + N ++ +S++ Y V+ A + D M K++ + + MI G +
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD-GSVRVS 369
EA+ +F M + PN +T++S+L A + L W G A R+ L + V
Sbjct: 410 SDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG 465
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
T+++D YAKCG I AR F+++ EK SW +I+ +A+NG +AL +F+ M ++G+
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT 525
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
PN +T + LSACNH GLV +G FK+M P ++HY C+VD+L RAG +D A L
Sbjct: 526 PNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVEL 585
Query: 490 IQTMPFD--ANGIILSSFLFAC-GHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
I+ +P D A + L C FK + V+ E +++E C+ Y+L + +A E
Sbjct: 586 IKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAE 645
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
K W DV ++ ++K R S++ + F+AGD L + + + L + M
Sbjct: 646 KSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCM 705
Query: 607 KVE 609
K++
Sbjct: 706 KLD 708
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 165/376 (43%), Gaps = 76/376 (20%)
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR----------- 260
Y +CGD+ + FD M RD ++NV++ G + G + F K+R
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 261 ------------DKNVISWTSMVSGYC-----QN--------GDVESARLMFDLMPEKNL 295
D I + SG+C QN D SAR +FD M E+++
Sbjct: 131 VLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDV 190
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+W+ +I + ++K+P LKLF+EM+ A EP+ VT+ SVL A + +D+G + G
Sbjct: 191 ISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHG 250
Query: 356 FARRKKLD-GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
F+ R+ D V V +LIDMY+K ++ A +F+E + SWN+++ GF N R
Sbjct: 251 FSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD 310
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSAC-------------------------------- 442
EALE+F +M++E +E+T++ +L C
Sbjct: 311 EALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLI 370
Query: 443 ---NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG 499
C LVD+ +M + M+ L AG DEA ++ M N
Sbjct: 371 DAYTSCSLVDDAGTVLDSM----TYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNA 426
Query: 500 IILSSFLFACGHFKDV 515
I + S L AC D+
Sbjct: 427 ITVISLLNACSVSADL 442
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 162/322 (50%), Gaps = 17/322 (5%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F+P T ++ C + +G ++HG +++GFC V +++ MY L SAR
Sbjct: 123 FEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SAR 179
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM-----PERDVAAFNVMIDGYVKL 246
K+FDEMSER +SW+ VI Y + + KLF M E D ++ +
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 247 GCMDMAQDL--FDKMRD---KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
+D+ + + F R +V S++ Y + DV+SA +FD +N+ +WN++
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
+ G N++ EAL++F M+ A VE +EVT++S+L I G R+
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEA-VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
+ + ++LID Y C + A + + M K+ S + +I+G A GR+ EA+ +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 422 MMIREGFRPNEITMIGVLSACN 443
M R+ PN IT+I +L+AC+
Sbjct: 419 HM-RD--TPNAITVISLLNACS 437
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 263/468 (56%), Gaps = 23/468 (4%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG 216
E+H ++K F + VA A V Y K G L A++VF + ++ SW A+I G+ +
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 217 DMSEA------RKLFDVMPERDVAAFNV--MIDGYVKLGCMDMAQD----LFDKMRDKNV 264
D + K+ ++P+ +F V ++ KL + + ++ + ++++
Sbjct: 476 DPRLSLDAHLQMKISGLLPD----SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
+ S++S Y G++ + + +FD M +K+L +WN +I G+ +N P AL +FR+M++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLY 591
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGR 384
++ ++++ V A + L +L LG +A + L+ ++ +LIDMYAK G I +
Sbjct: 592 G-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 650
Query: 385 ARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
+ +F + EK TASWNA+I G+ ++G AKEA+++FE M R G P+++T +GVL+ACNH
Sbjct: 651 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710
Query: 445 CGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLI-QTMPFDANGIIL 502
GL+ EG R M+ FG+ P ++HY C++D+LGRAG LD+A ++ + M +A+ I
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIW 770
Query: 503 SSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
S L +C +++ E+V + ++E E +YVLL NLYA +W DV V+ M
Sbjct: 771 KSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEM 830
Query: 563 GSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEI 610
K+ CS IE++ + FV G+ E I+ LW ++++I
Sbjct: 831 SLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK----SLWSILEMKI 874
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 180/433 (41%), Gaps = 87/433 (20%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
+R FDA ++ F N++I+++ + E F ++ ++ T P T+
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM--------ISTTDLLPDHFTY 190
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++K C GL VHG+ VK G D++V ALV Y G + A ++FD M E
Sbjct: 191 PCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPE 250
Query: 200 RSRVSWTAVIVGYT-----------------RCGD---MSEARKLFDVMP---------- 229
R+ VSW ++I ++ GD M + L V+P
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 230 -------------ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ 276
++++ N ++D Y K GC+ AQ +F +KNV+SW +MV G+
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA-SVEPNEVTLL 335
GD H + R+ML V+ +EVT+L
Sbjct: 371 EGDT-------------------------------HGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
+ +P L + ++ +++ + V+ A + YAKCG + A+ +F + K
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
SWNALI G A + + +L+ M G P+ T+ +LSAC+ + R
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL----KSLRLG 515
Query: 456 KAMEGFGIAPQIE 468
K + GF I +E
Sbjct: 516 KEVHGFIIRNWLE 528
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 18/291 (6%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF---- 225
D + T ++ MY G +R VFD + ++ W AVI Y+R E + F
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 226 ---DVMPERDVAAFNVMID---GYVKLGCMDMAQDLFDKM-RDKNVISWTSMVSGYCQNG 278
D++P D + +I G +G L K ++V ++VS Y +G
Sbjct: 179 STTDLLP--DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG 236
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM---SASVEPNEVTLL 335
V A +FD+MPE+NL +WN+MI N E+ L EM+ + P+ TL+
Sbjct: 237 FVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
+VLP A + LG + G+A + +LD + ++ AL+DMY+KCG I A+++F+ K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREG--FRPNEITMIGVLSACNH 444
SWN ++ GF+ G +V M+ G + +E+T++ + C H
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 199/441 (45%), Gaps = 57/441 (12%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITT---CASIAVSTSRRNEAVSIVRHAR 81
C + + +L ++H + L+ N + F+ + C S++ +A+
Sbjct: 405 CFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS--------------YAQ 450
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
R F + N++I H Q ++P L D A M ++ P T +
Sbjct: 451 RVFHGIRSKTVNSWNALIGGH---AQSNDP-RLSLD-----AHLQMKISGLLPDSFTVCS 501
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
L+ C+ + R G EVHG ++N DL+V +++ +Y+ G L + + +FD M ++S
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGY--------------VKLG 247
VSW VI GY + G A +F R + + + + G ++LG
Sbjct: 562 LVSWNTVITGYLQNGFPDRALGVF-----RQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 248 CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
A L + D I+ S++ Y +NG + + +F+ + EK+ +WNAMI G+
Sbjct: 617 REAHAYALKHLLEDDAFIA-CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSV 366
+ EA+KLF EM + P+++T L VL A G + G ++ L ++
Sbjct: 676 HGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 367 RVSTALIDMYAKCGEIGRA-RLLFEEMPEK-ETASWNALINGFAVNGR----AKEALEVF 420
+ +IDM + G++ +A R++ EEM E+ + W +L++ ++ K A ++F
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 421 EMMIREGFRPNEITMIGVLSA 441
E+ E +P ++ L A
Sbjct: 795 EL---EPEKPENYVLLSNLYA 812
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 162/352 (46%), Gaps = 24/352 (6%)
Query: 258 KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
++R+ +V+ T +++ Y G + +R +FD + KNLF WNA+I + +N+ E L+
Sbjct: 115 RLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLET 173
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
F EM+ + + P+ T V+ A A + + +G + G + L V V AL+ Y
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 378 KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF-EMMIREG---FRPNEI 433
G + A LF+ MPE+ SWN++I F+ NG ++E+ + EMM G F P+
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH----YGCMVDLLGRAGCLDEAENL 489
T++ VL C + G K + G+ + +++ ++D+ + GC+ A+ +
Sbjct: 294 TLVTVLPVCAREREIGLG----KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ-M 348
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
I M + N + ++ + D VLR+ + ++ D V + N
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVP----- 403
Query: 550 TDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQ 601
V S KE+ C ++ + + E VA ++ S + L+ Q
Sbjct: 404 -----VCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 19 CLDLLQCKSKKTITTLLQIHAFMLRNSVDNN----LNLLAKFITTCASIAVSTSRRNEAV 74
C L C K++ ++H F++RN ++ + L++L+ +I C +
Sbjct: 500 CSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI-HCGELCT--------- 549
Query: 75 SIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP 134
+ FDA + N++IT + F D G R M + +
Sbjct: 550 -----VQALFDAMEDKSLVSWNTVITGYLQ--------NGFPDRALGV-FRQMVLYGIQL 595
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
G + + C+ + R G E H A+K+ D ++A +L+DMY K G + + KVF
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
+ + E+S SW A+I+GY G EA KLF+ M
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 165/540 (30%), Positives = 270/540 (50%), Gaps = 25/540 (4%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCR-GTATRTMTMTPFKP 134
+V AR FD RD +MIT + + + + F ++ + GT+ P
Sbjct: 60 LVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS----------P 109
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV-LGSARKV 193
T ++++K C G VHGV VK G LYV A+++MY V + +A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCM 249
F ++ ++ V+WT +I G+T GD K++ M E + + + +
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 250 DMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
+ + + + N+ S++ YC+ G + A+ F M +K+L TWN +I
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-E 288
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+ EAL +F+ S PN T S++ A A++ AL+ G + G R+ + +
Sbjct: 289 LERSDSSEALLMFQR-FESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKET-ASWNALINGFAVNGRAKEALEVFEMMI 424
V ++ ALIDMYAKCG I ++ +F E+ ++ SW +++ G+ +G EA+E+F+ M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCL 483
G RP+ I + VLSAC H GLV++G + F ME +GI P + Y C+VDLLGRAG +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERV-LRETVKMEKECAGDYVLLRNL 542
EA L++ MPF + + L AC K R+ R+ ++++ + G YV+L +
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
YA E +W D V+ MM+M G+ KE S I V+ + F D + N + LG L
Sbjct: 528 YAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 44/346 (12%)
Query: 206 TAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM------ 259
T +IV Y G + EAR LFD MP+RDV A+ MI GY A + F +M
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 260 -------------RDKNVISWTSMVSG-----------YCQNG----------DVESARL 285
R+ V+++ ++V G Y N +E+A L
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM-SASVEPNEVTLLSVLPAVADL 344
+F + KN TW +I G LK++++ML+ +A V P +T+ + A A +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASI 226
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
++ G I ++ ++ V +++D+Y +CG + A+ F EM +K+ +WN LI
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIA 464
+ + EAL +F+ +GF PN T +++AC + ++ G++ + G
Sbjct: 287 SELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 465 PQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG 510
+E ++D+ + G + +++ + + N + +S + G
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG 391
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 2/233 (0%)
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
K+ I T+++ Y + G VE AR +FD MP++++ W AMI G+ + A + F EM
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG- 380
+ + PNE TL SVL + ++ L G + G + ++GS+ V A+++MYA C
Sbjct: 103 VKQGT-SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
+ A L+F ++ K +W LI GF G L++++ M+ E + +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
A V G++ ++ G + ++DL R G L EA++ M
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 43/297 (14%)
Query: 27 SKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRF 83
S ++TT QIHA +++ +NL N + C ++ A+ +
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLS--------------EAKHY 270
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALV 143
F +D N++I + SE +F+ F P +TFT+LV
Sbjct: 271 FHEMEDKDLITWNTLI-SELERSDSSEALLMFQRF---------ESQGFVPNCYTFTSLV 320
Query: 144 KGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR- 202
C A G ++HG + GF ++ +A AL+DMY K G + +++VF E+ +R
Sbjct: 321 AACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNL 380
Query: 203 VSWTAVIVGYTRCGDMSEARKLFDVM------PERDVAAFNVMIDGYVKLGCMDMAQDLF 256
VSWT++++GY G +EA +LFD M P+R V F ++ G ++ F
Sbjct: 381 VSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV--FMAVLSACRHAGLVEKGLKYF 438
Query: 257 DKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMPEK-NLFTWNAMIGGHCK 307
+ M + I+ + +V + G + A + + MP K + TW A++G CK
Sbjct: 439 NVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGA-CK 494
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 244/464 (52%), Gaps = 37/464 (7%)
Query: 171 LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMS---EARKLFDV 227
L++ ++ + F + A +VFD + S W +I D+S EA L+
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAH--DVSRKEEAFMLYRK 140
Query: 228 MPERDVAAFNVMIDGYVKLGCM---------DMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
M ER ++ + +V C + + +V ++ Y G
Sbjct: 141 MLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG 200
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
++ AR +FD MPE++L +WN+MI + + AL+LFREM S EP+ T+ SVL
Sbjct: 201 CLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM--QRSFEPDGYTMQSVL 258
Query: 339 PAVADLGALDLGGWIQGFARRK---KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
A A LG+L LG W F RK + V V +LI+MY KCG + A +F+ M ++
Sbjct: 259 SACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKR 318
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMI--REGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ ASWNA+I GFA +GRA+EA+ F+ M+ RE RPN +T +G+L ACNH G V++GR+
Sbjct: 319 DLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ 378
Query: 454 CFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA-CGH 511
F M + I P +EHYGC+VDL+ RAG + EA +++ +MP + +I S L A C
Sbjct: 379 YFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKK 438
Query: 512 FKDVSRAERVLRETVKMEKE-------CAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGS 564
V +E + R + +++ C+G YVLL +YA+ RW DV V+ +M G
Sbjct: 439 GASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGI 498
Query: 565 YKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
KE CS IE++G EF AGD H + Q+++ +KV
Sbjct: 499 RKEPGCSSIEINGISHEFFAGDTSHPQTK-------QIYQQLKV 535
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/430 (29%), Positives = 193/430 (44%), Gaps = 50/430 (11%)
Query: 8 QRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDN---NLNLLAKFITTCASIA 64
+ ++S AE C D+ Q K Q+HAF LR + L L K + +S
Sbjct: 48 HQRIFSLAE-TCSDMSQLK---------QLHAFTLRTTYPEEPATLFLYGKILQLSSSF- 96
Query: 65 VSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMI--TTHFAIRQFSEPFTLFRDLC-RG 121
S V +A R FD+ F+ N++I H R+ E F L+R + RG
Sbjct: 97 ----------SDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRK-EEAFMLYRKMLERG 145
Query: 122 TATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMY 181
++ P HTF ++K C EG +VH VK+GF D+YV L+ +Y
Sbjct: 146 ESS---------PDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY 196
Query: 182 VKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP---ERDVAAFNV 238
G L ARKVFDEM ERS VSW ++I R G+ A +LF M E D
Sbjct: 197 GSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQS 256
Query: 239 MIDGYVKLGCMDM---AQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMP 291
++ LG + + A + D +V+ S++ YC+ G + A +F M
Sbjct: 257 VLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ 316
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREML-MSASVEPNEVTLLSVLPAVADLGALDLG 350
+++L +WNAMI G + + EA+ F M+ +V PN VT + +L A G ++ G
Sbjct: 317 KRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKG 376
Query: 351 -GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFA 408
+ R ++ ++ ++D+ A+ G I A + MP K A W +L++
Sbjct: 377 RQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 436
Query: 409 VNGRAKEALE 418
G + E E
Sbjct: 437 KKGASVELSE 446
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 279/555 (50%), Gaps = 44/555 (7%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ ARR F +D NSMIT F E ++ +M PG
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK---------SMRRHDILPGS 415
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T + + C + + G ++HG ++K G L++ V+ AL+ +Y + G L RK+F
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG-------------- 242
M E +VSW ++I G ++ + + +PE V N G
Sbjct: 476 MPEHDQVSWNSII------GALARSER---SLPEAVVCFLNAQRAGQKLNRITFSSVLSA 526
Query: 243 -----YVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK-NLF 296
+ +LG L + + D+ ++++ Y + G+++ +F M E+ +
Sbjct: 527 VSSLSFGELGKQIHGLALKNNIADEATTE-NALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
TWN+MI G+ N+ +AL L ML + + +VL A A + L+ G +
Sbjct: 586 TWNSMISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHAC 644
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
+ R L+ V V +AL+DMY+KCG + A F MP + + SWN++I+G+A +G+ +EA
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEA 704
Query: 417 LEVFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMV 474
L++FE M +G P+ +T +GVLSAC+H GL++EG + F++M + +G+AP+IEH+ CM
Sbjct: 705 LKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMA 764
Query: 475 DLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC--GHFKDVSRAERVLRETVKMEKEC 532
D+LGRAG LD+ E+ I+ MP N +I + L AC + + ++ ++E E
Sbjct: 765 DVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPEN 824
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNL 592
A +YVLL N+YA RW D+ + MK KE S + + FVAGD H +
Sbjct: 825 AVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDA 884
Query: 593 EVIQLTLGQLWKHMK 607
+VI L +L + M+
Sbjct: 885 DVIYKKLKELNRKMR 899
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/506 (24%), Positives = 217/506 (42%), Gaps = 44/506 (8%)
Query: 38 HAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNS 97
H+ + +N +D ++ L I S S AR+ FD R+
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVS-----------ARKVFDEMPLRNCVSWAC 72
Query: 98 MITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCT--ACMATREG 155
+++ + + E RD M + F ++++ C + G
Sbjct: 73 IVSGYSRNGEHKEALVFLRD---------MVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVK-FGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
++HG+ K + +D V+ L+ MY K G +G A F ++ ++ VSW ++I Y++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 215 CGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGC------MDMAQDLFDKMRDKNVIS-- 266
GD A ++F M V C + + + + ++ +++
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 267 --WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS 324
+ +VS + ++G + AR +F+ M +N T N ++ G + K EA KLF +M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 325 ASVEPNE-VTLLSVLP--AVADLGALDLGGWIQGFARRKKL-DGSVRVSTALIDMYAKCG 380
V P V LLS P ++A+ L G + G L D V + L++MYAKCG
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
I AR +F M +K++ SWN++I G NG EA+E ++ M R P T+I LS
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGI 500
+C G++ GI + ++ L G L+E + +MP + + +
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQV 482
Query: 501 ILSSFLFACGHFKDVSRAERVLRETV 526
+S + A ++R+ER L E V
Sbjct: 483 SWNSIIGA------LARSERSLPEAV 502
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 168/442 (38%), Gaps = 103/442 (23%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C S K QIH L+ +D N+++ +T A T NE R
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA----ETGYLNE-------CR 470
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ F + + D+ NS+I A + S P + +C A R K TF++
Sbjct: 471 KIFSSMPEHDQVSWNSIIGA-LARSERSLPEAV---VCFLNAQRAGQ----KLNRITFSS 522
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE-R 200
++ ++ G ++HG+A+KN + AL+ Y K G + K+F M+E R
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 201 SRVSWTAVIVGYTRCGDMSEARKLFDVM-------------------------------- 228
V+W ++I GY +++A L M
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 229 -------PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVE 281
E DV + ++D Y K G +D A F+ M +N SW SM+SGY ++G
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG--- 699
Query: 282 SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
Q EALKLF M + P+ VT + VL A
Sbjct: 700 ----------------------------QGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVS------TALIDMYAKCGEIGRARLLFEEMPEK 395
+ G L+ +GF + + S ++ + + D+ + GE+ + E+MP K
Sbjct: 732 SHAGLLE-----EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMK 786
Query: 396 ETA-SWNALINGFA-VNGRAKE 415
W ++ NGR E
Sbjct: 787 PNVLIWRTVLGACCRANGRKAE 808
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/462 (32%), Positives = 252/462 (54%), Gaps = 18/462 (3%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKN-GFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
+T L+ C + + G+++ + + N + + + L+ ++ L ARK+FD++
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDV 193
Query: 198 SERSRVS---WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM--- 251
++ S ++ W A+ +GY+R G +A ++ M + N I +K C+D+
Sbjct: 194 TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALK-ACVDLKDL 252
Query: 252 -------AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
AQ + K + V+ + ++ Y ++G + AR +FD M E+N+ TWN++I
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVV-YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
K + HE LFR+M + + TL ++LPA + + AL G I + K
Sbjct: 312 LSKKVRVHEMFNLFRKM-QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
V + +L+DMY KCGE+ +R +F+ M K+ ASWN ++N +A+NG +E + +FE MI
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCL 483
G P+ IT + +LS C+ GL + G F+ M+ F ++P +EHY C+VD+LGRAG +
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKI 490
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
EA +I+TMPF + I S L +C +VS E +E +E G+YV++ N+Y
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
A K W +V+ ++ MMK RG KE CS ++V + + FVAG
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 200/444 (45%), Gaps = 51/444 (11%)
Query: 21 DLLQ-CKSKKTITTLLQIHAFMLRN-SVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVR 78
DLL C S K++ ++I + +L N S+ +N LL+K IT S RR +
Sbjct: 136 DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITL-----FSVCRRLDL----- 185
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAI---RQFS--EPFTLFRDLCRGTATRTMTMTPFK 133
AR+ FD D L + AI R S + ++ D M + +
Sbjct: 186 -ARKIFDDV--TDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVD---------MLCSFIE 233
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
PG + + +K C R G +H VK +D V L+ +Y++ G+ ARKV
Sbjct: 234 PGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKV 293
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCM 249
FD MSER+ V+W ++I ++ + E LF M E + A ++ ++ +
Sbjct: 294 FDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAAL 353
Query: 250 ----DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
++ + +V S++ Y + G+VE +R +FD+M K+L +WN M+ +
Sbjct: 354 LTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
N E + LF E ++ + V P+ +T +++L +D G + G + F R K
Sbjct: 414 AINGNIEEVINLF-EWMIESGVAPDGITFVALLSGCSDTGLTEYG--LSLFERMKT---E 467
Query: 366 VRVSTA------LIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEA-L 417
RVS A L+D+ + G+I A + E MP K +AS W +L+N ++G +
Sbjct: 468 FRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEI 527
Query: 418 EVFEMMIREGFRPNEITMIGVLSA 441
E+ + E P M+ + A
Sbjct: 528 AAKELFVLEPHNPGNYVMVSNIYA 551
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 243/473 (51%), Gaps = 42/473 (8%)
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN 237
+ MY K G SA V+ M +++ +S +I GY R GD+ ARK+FD MP+R + +N
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 238 VMIDGYVKLGCMDMAQDLFDKMR------------------------------------- 260
MI G ++ + LF +M
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 261 --DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLF 318
+ +++ +S+ Y +NG ++ ++ MP +NL WN +I G+ +N P L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
+ M +S PN++T ++VL + +DL G I A + V V ++LI MY+K
Sbjct: 181 KMMKISG-CRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 379 CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE-GFRPNEITMIG 437
CG +G A F E +++ W+++I+ + +G+ EA+E+F M + NE+ +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 438 VLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFD 496
+L AC+H GL D+G F M E +G P ++HY C+VDLLGRAGCLD+AE +I++MP
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 497 ANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVK 556
+ +I + L AC K+ A+RV +E ++++ + YVLL N++A+ KRW DV +V+
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVR 419
Query: 557 HMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
M+ + KE S E G +F GD S + I L +L MK++
Sbjct: 420 KSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLK 472
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 152/395 (38%), Gaps = 83/395 (21%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
+AR+ FD R N+MI E +LFR+ M F P +T
Sbjct: 43 NARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE---------MHGLGFSPDEYT 93
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
++ G + G ++HG +K G LDL V ++L MY++ G L V M
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP 153
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PER-----------DVA------- 234
R+ V+W +I+G + G L+ +M P + D+A
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 235 ---------------AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGD 279
+ +I Y K GC+ A F + D++ + W+SM+S Y +G
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHG- 272
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
Q EA++LF M ++E NEV L++L
Sbjct: 273 ------------------------------QGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 340 AVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-ET 397
A + G D G + ++ T ++D+ + G + +A + MP K +
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 362
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
W L++ ++ A+ A VF+ +++ PN+
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 395
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 265/549 (48%), Gaps = 42/549 (7%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V+ AR FD +RD N+MI+ +F E LF A R +++ P
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF------FAMRGLSV---DPDL 297
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T T+++ C R G ++H + GF +D+ V +L MY+ G A K+F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----------- 245
M + VSWT +I GY ++ +P++ + + +M VK
Sbjct: 358 MERKDIVSWTTMISGYE-----------YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLS 406
Query: 246 ----LGCMDMAQDLFDKMRDKNVISW----TSMVSGYCQNGDVESARLMFDLMPEKNLFT 297
LG +D +L +IS+ ++++ Y + ++ A +F +P KN+ +
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
W ++I G N + EAL R+M M+ ++PN +TL + L A A +GAL G I
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
R + + AL+DMY +CG + A F +K+ SWN L+ G++ G+ +
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVV 583
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLL 477
E+F+ M++ RP+EIT I +L C+ +V +G F ME +G+ P ++HY C+VDLL
Sbjct: 584 ELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLL 643
Query: 478 GRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYV 537
GRAG L EA IQ MP + + + L AC + E + +++K+ G Y+
Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 538 LLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQL 597
LL NLYA +W +V V+ MMK G + CS +EV G+ F++ D H + I
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 598 TLGQLWKHM 606
L ++ M
Sbjct: 764 VLEGFYEKM 772
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 171/397 (43%), Gaps = 72/397 (18%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
F ALV+ C A EG +V+ +A+ + L + + A + M+V+FG L A VF +M
Sbjct: 96 VFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKM 155
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVM----------------------------- 228
SER+ SW ++ GY + G EA L+ M
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 229 -----------PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN 277
E D+ N +I YVK G + A+ LFD+M +++ISW +M+SGY +N
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G HE L+LF M SV+P+ +TL SV
Sbjct: 276 G-------------------------------MCHEGLELFFAM-RGLSVDPDLMTLTSV 303
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
+ A LG LG I + + V +L MY G A LF M K+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SW +I+G+ N +A++ + MM ++ +P+EIT+ VLSAC G +D G K
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 458 MEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+ + ++++ + C+D+A ++ +P
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 80/387 (20%)
Query: 84 FDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALV 143
F +R+ F N ++ + F E L+ R + + KP +TF ++
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH--------RMLWVGGVKPDVYTFPCVL 203
Query: 144 KGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV 203
+ C G EVH V+ G+ LD+ V AL+ MYVK G + SAR +FD M R +
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 263
Query: 204 SWTAVIVGYTRCGDMSEARKLFDVM------PE--------------------RDVAAF- 236
SW A+I GY G E +LF M P+ RD+ A+
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323
Query: 237 ------------NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESAR 284
N + Y+ G A+ LF +M K+++SWT+M+SGY
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY---------- 373
Query: 285 LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
++ +P+K + T+ M+ SV+P+E+T+ +VL A A L
Sbjct: 374 -EYNFLPDKAIDTY---------------------RMMDQDSVKPDEITVAAVLSACATL 411
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
G LD G + A + +L V V+ LI+MY+KC I +A +F +P K SW ++I
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPN 431
G +N R EAL +F ++ +PN
Sbjct: 472 AGLRLNNRCFEAL-IFLRQMKMTLQPN 497
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 216 GDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSM----- 270
G + EA KL + M E VA + V+L AQ+ K+ + S +S+
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 271 ---VSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
++ + + G++ A +F M E+NLF+WN ++GG+ K EA+ L+ ML V
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
+P+ T VL + L G + R + + V ALI MY KCG++ ARL
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
LF+ MP ++ SWNA+I+G+ NG E LE+F M P+ +T+ V+SAC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
GR + G A I + + AG EAE L M
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 2/192 (1%)
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G C N + EA+KL M V +E ++++ A + G + A
Sbjct: 68 GLCANGKLEEAMKLLNSM-QELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
V + A + M+ + G + A +F +M E+ SWN L+ G+A G EA+ ++ M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 424 IR-EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGC 482
+ G +P+ T VL C + G+ + +G I+ ++ + + G
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 483 LDEAENLIQTMP 494
+ A L MP
Sbjct: 247 VKSARLLFDRMP 258
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 245/462 (53%), Gaps = 12/462 (2%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG 216
++H + ++ GF + T L++ V G + AR+VFDEM + W + GY R
Sbjct: 29 KIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 217 DMSEA----RKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWT 268
E+ +K+ D+ D + ++ +LG L + I T
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
+V Y + G++ SA +F+ M K+L WNA + + AL+ F +M A V+
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA-VQ 207
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL 388
+ T++S+L A LG+L++G I AR++++D ++ V A +DM+ KCG AR+L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 389 FEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
FEEM ++ SW+ +I G+A+NG ++EAL +F M EG RPN +T +GVLSAC+H GLV
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 449 DEGRRCFKAM---EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
+EG+R F M + P+ EHY CMVDLLGR+G L+EA I+ MP + + I +
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 506 LFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY 565
L AC +D+ ++V V+ + +VLL N+YA +W V+ V+ M+ G+
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 566 KEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
K A S +E +G+ F GD H + I L ++ K ++
Sbjct: 448 KVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIR 489
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 189/403 (46%), Gaps = 36/403 (8%)
Query: 21 DLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHA 80
+LL+ S K L +IHA +LR +LL + + I +A
Sbjct: 15 ELLRASSSKP-KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMC-----------YA 62
Query: 81 RRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFT 140
R+ FD HK FL N++ + + E L++ + R R P T+
Sbjct: 63 RQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM-RDLGVR--------PDEFTYP 113
Query: 141 ALVKGCTACMATREGLEVHGVAVKNGF-CLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+VK + G +H VK GF CL + VAT LV MY+KFG L SA +F+ M
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGI-VATELVMMYMKFGELSSAEFLFESMQV 172
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA--AFNV--MIDGYVKLGCMDMAQDL 255
+ V+W A + + G+ + A + F+ M V +F V M+ +LG +++ +++
Sbjct: 173 KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI 232
Query: 256 FDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+D+ R D N+I + + + + G+ E+AR++F+ M ++N+ +W+ MI G+ N
Sbjct: 233 YDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDS 292
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF---ARRKKLDGSVRV 368
EAL LF M + + PN VT L VL A + G ++ G + K L+
Sbjct: 293 REALTLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 369 STALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVN 410
++D+ + G + A ++MP E +T W AL+ AV+
Sbjct: 352 YACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/415 (34%), Positives = 229/415 (55%), Gaps = 9/415 (2%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
+H + VK G D+ V T+LV Y + G L SA +++ + S V T+++ Y GD
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 218 MSEARKLFD----VMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSG 273
M A F + + D A ++ G K +D+ L + + T +V+G
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 274 ----YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
Y + DVE+ +F+ + E L +WN++I G ++ + A ++F +M+++ + P
Sbjct: 388 LITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLP 447
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ +T+ S+L + L L+LG + G+ R + V TALIDMYAKCG +A +F
Sbjct: 448 DAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVF 507
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+ + TA+WN++I+G++++G AL + M +G +P+EIT +GVLSACNH G VD
Sbjct: 508 KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVD 567
Query: 450 EGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
EG+ CF+AM + FGI+P ++HY MV LLGRA EA LI M + + + L A
Sbjct: 568 EGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSA 627
Query: 509 CGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRG 563
C +++ E V R+ ++ + G YVL+ NLYATE W DV V++MMK G
Sbjct: 628 CIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 196/455 (43%), Gaps = 83/455 (18%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V A+ FD +RD + N++I + + + LF M F P
Sbjct: 101 VTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFI---------VMLQQGFSPSA 151
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T L+ C C +G VHGVA K+G LD V AL+ Y K LGSA +F E
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER------------------------- 231
M ++S VSW +I Y++ G EA +F M E+
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCL 271
Query: 232 --------DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESA 283
D++ ++ Y + GC+ A+ L+ + +++ TS+VS Y + GD++ A
Sbjct: 272 VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIA 331
Query: 284 RLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVAD 343
+ F K +Q ++ + V L+ +L
Sbjct: 332 VVYFS------------------KTRQ--------------LCMKIDAVALVGILHGCKK 359
Query: 344 LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNAL 403
+D+G + G+A + L V LI MY+K ++ LFE++ E SWN++
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 404 INGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
I+G +GRA A EVF +MM+ G P+ IT+ +L+ C+ ++ G K + G+
Sbjct: 420 ISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG----KELHGYT 475
Query: 463 IAPQI--EHYGC--MVDLLGRAGCLDEAENLIQTM 493
+ E++ C ++D+ + G +AE++ +++
Sbjct: 476 LRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 7/237 (2%)
Query: 261 DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFRE 320
D+ V TS+++ Y + G V SA+++FD MPE++ WNA+I G+ +N +A KLF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIV 141
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
ML P+ TL+++LP G + G + G A + L+ +V ALI Y+KC
Sbjct: 142 MLQQG-FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCA 200
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
E+G A +LF EM +K T SWN +I ++ +G +EA+ VF+ M + + +T+I +LS
Sbjct: 201 ELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLS 260
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
A + E C + G+ I +V R GCL AE L + D+
Sbjct: 261 A----HVSHEPLHCL--VVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDS 311
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 100/183 (54%), Gaps = 7/183 (3%)
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVA-DLGALDLG-GWIQGFARRKKLDGSVRVSTAL 372
+ +FR++L S S+ PN T+ L A + L +Q + LD V V T+L
Sbjct: 33 ITIFRDLLRS-SLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSL 91
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
+++Y K G + A++LF+EMPE++T WNALI G++ NG +A ++F +M+++GF P+
Sbjct: 92 LNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA 151
Query: 433 ITMIGVLSACNHCGLVDEGRRC--FKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
T++ +L C CG V +GR A G + Q+++ ++ + L AE L
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN--ALISFYSKCAELGSAEVLF 209
Query: 491 QTM 493
+ M
Sbjct: 210 REM 212
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T +L+ GC+ G E+HG ++N F + +V TAL+DMY K G A V
Sbjct: 447 PDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESV 506
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
F + +W ++I GY+ G A + M E+ + D LG +
Sbjct: 507 FKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKP-----DEITFLGVLSACN 561
Query: 254 DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFT 297
D+ I + +M+ + + ++ LM L+ LFT
Sbjct: 562 H--GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFT 603
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 272/543 (50%), Gaps = 27/543 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR FD +RD NS+I E LF L R KP +T
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR---------CGLKPDQYTM 419
Query: 140 TALVKGCTACMATREGL----EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
T+++K A + EGL +VH A+K D +V+TAL+D Y + + A +F
Sbjct: 420 TSVLK---AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF- 475
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
E V+W A++ GYT+ D + KLF +M ++ + + + K A +
Sbjct: 476 ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 256 FDKMRDKNVIS------WTS--MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
++ + S W S ++ Y + GD+ +A+ FD +P + W MI G +
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVR 367
N + A +F +M + V P+E T+ ++ A + L AL+ G I A +
Sbjct: 596 NGEEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG 427
V T+L+DMYAKCG I A LF+ + +WNA++ G A +G KE L++F+ M G
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEA 486
+P+++T IGVLSAC+H GLV E + ++M G +GI P+IEHY C+ D LGRAG + +A
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 487 ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
ENLI++M +A+ + + L AC D +RV + +++E + YVLL N+YA
Sbjct: 775 ENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 834
Query: 547 KRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
+W +++ + MMK K+ S IEV + FV D + E+I + + + +
Sbjct: 835 SKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894
Query: 607 KVE 609
K E
Sbjct: 895 KQE 897
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 190/444 (42%), Gaps = 80/444 (18%)
Query: 79 HARRFFDATHKRDEFLCNSMI-----TTHFAIRQFSEPFTLFRDLCRGTA-TRTMTMTPF 132
+ARR FD RD NS++ ++ + + F LFR L + T MT++P
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSP- 150
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
++K C HG A K G D +VA ALV++Y+KFG
Sbjct: 151 ---------MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG------- 194
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMA 252
+ E + LF+ MP RDV +N+M+ Y+++G + A
Sbjct: 195 ------------------------KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 253 QDLFDKMRDKNV------ISWTSMVSGYCQN-GDVESARLMFDLMPEKNLFTWNAMIGGH 305
DL + + + +SG + G V+S D + N + +
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEY 290
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+ Q LK F +M+ S VE ++VT + +L + +L LG + A + LD
Sbjct: 291 LHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+ VS +LI+MY K + G AR +F+ M E++ SWN++I G A NG EA+ +F ++R
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG-------------C 472
G +P++ TM VL A + EG ++ Q+ +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLP------------EGLSLSKQVHVHAIKINNVSDSFVSTA 457
Query: 473 MVDLLGRAGCLDEAENLIQTMPFD 496
++D R C+ EAE L + FD
Sbjct: 458 LIDAYSRNRCMKEAEILFERHNFD 481
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH-----CKNKQPHEALKLFREML 322
+++S Y + G + AR +FD MP+++L +WN+++ + C + +A LFR +L
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR-IL 136
Query: 323 MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
V + +TL +L G + G+A + LDG V+ AL+++Y K G++
Sbjct: 137 RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
++LFEEMP ++ WN ++ + G +EA+++ G PNEIT+
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 16/177 (9%)
Query: 172 YVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG-----DMSEARKLFD 226
++ L+ MY K G L AR+VFD+M +R VSW +++ Y + ++ +A LF
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 227 VMPERDVAAFNVMIDGYVKLGCMD----MAQDLFDKMRDKNVISWTSMVSG-----YCQN 277
++ + V + + +KL C+ A + F K + V+G Y +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKL-CLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF 193
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
G V+ +++F+ MP +++ WN M+ + + EA+ L S+ + PNE+TL
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL-SSAFHSSGLNPNEITL 249
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 272/571 (47%), Gaps = 83/571 (14%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR F+ +D + +++ + F + L M M F P
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS---------CMRMAGFMPNN 247
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+TF +K A VHG +K + LD V L+ +Y
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLY--------------- 292
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
T+ GDMS+A K+F+ MP+ DV ++ MI + + G + A DLF
Sbjct: 293 ----------------TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 257 DKMRDKNVI----SWTSMVSG-----------------------------------YCQN 277
+MR+ V+ + +S+++G Y +
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
+++A +F + KN +WN +I G+ + +A +FRE L + V EVT S
Sbjct: 397 EKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRN-QVSVTEVTFSSA 455
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
L A A L ++DLG + G A + V VS +LIDMYAKCG+I A+ +F EM +
Sbjct: 456 LGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDV 515
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
ASWNALI+G++ +G ++AL + ++M +PN +T +GVLS C++ GL+D+G+ CF++
Sbjct: 516 ASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFES 575
Query: 458 M-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS 516
M GI P +EHY CMV LLGR+G LD+A LI+ +P++ + +I + L A + +
Sbjct: 576 MIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE 635
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVD 576
A R E +K+ + YVL+ N+YA K+W +V ++ MK G KE S IE
Sbjct: 636 FARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQ 695
Query: 577 GRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
G F G H ++++I L W +MK
Sbjct: 696 GDVHYFSVGLSDHPDMKLINGMLE--WLNMK 724
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 145/316 (45%), Gaps = 9/316 (2%)
Query: 134 PG--GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
PG H + A+++ C +H +K G CLDL+ L++ YVK G A
Sbjct: 45 PGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL 104
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLG---- 247
+FDEM ER+ VS+ + GY + +L E + F + +V L
Sbjct: 105 NLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI 164
Query: 248 CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
C + + D N ++++ Y G V+SAR +F+ + K++ W ++ + +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVR 367
N ++LKL M M A PN T + L A LGA D + G + R
Sbjct: 225 NGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREG 427
V L+ +Y + G++ A +F EMP+ + W+ +I F NG EA+++F M RE
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM-REA 342
Query: 428 F-RPNEITMIGVLSAC 442
F PNE T+ +L+ C
Sbjct: 343 FVVPNEFTLSSILNGC 358
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 27/294 (9%)
Query: 227 VMPERDVAAFNVMIDGYVK----LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVES 282
++P D A+ M+ ++ + + D+ K ++ + +++ Y + G +
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 283 ARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
A +FD MPE+N ++ + G+ +L RE E N S L
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHRE-----GHELNPHVFTSFLKLFV 157
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNA 402
L ++ W+ + D + V ALI+ Y+ CG + AR +FE + K+ W
Sbjct: 158 SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEG--------RRC 454
+++ + NG +++L++ M GF PN T L A G D + C
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 455 FKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
+ G+ ++ L + G + +A + MP N ++ SF+ A
Sbjct: 278 YVLDPRVGVG--------LLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIA 321
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 258/513 (50%), Gaps = 18/513 (3%)
Query: 107 QFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNG 166
+F E F LF L FK G T+ ALV+ C + R V+G + NG
Sbjct: 102 RFREAFELFEIL--------EIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 167 FCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD 226
F + Y+ ++ M+VK G++ AR++FDE+ ER+ S+ ++I G+ G+ EA +LF
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 227 VMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT----SMVSGYCQNG 278
+M E + F VM+ LG + + + L V+ T ++ Y + G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
D+E AR F+ MPEK WN +I G+ + EAL L +M + V ++ TL ++
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDM-RDSGVSIDQFTLSIMI 332
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
L L+L R + + +TAL+D Y+K G + AR +F+++P K
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
SWNAL+ G+A +GR +A+++FE MI PN +T + VLSAC + GL ++G F +M
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSM 452
Query: 459 -EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR 517
E GI P+ HY CM++LLGR G LDEA I+ P + ++ L AC +++
Sbjct: 453 SEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLEL 512
Query: 518 AERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDG 577
V + M E G+YV++ N+Y + + + V ++ +G AC+ +EV
Sbjct: 513 GRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGD 572
Query: 578 RFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEI 610
+ F++GD S E ++ + Q + EI
Sbjct: 573 QTHSFLSGDRFDSYNETVKRQIYQKVDELMEEI 605
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 211/455 (46%), Gaps = 42/455 (9%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFF 84
C K+I + +++ FM+ N + ++ + + + ++ ARR F
Sbjct: 133 CIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLM-----------HVKCGMIIDARRLF 181
Query: 85 DATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
D +R+ + S+I+ + E F LF+ + + HTF +++
Sbjct: 182 DEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET---------HTFAVMLR 232
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
+ G ++H A+K G + +V+ L+DMY K G + AR F+ M E++ V+
Sbjct: 233 ASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA 292
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLGCMDMAQD----LF 256
W VI GY G EA L M + V+ ++MI KL +++ + L
Sbjct: 293 WNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLI 352
Query: 257 DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALK 316
+ +++ T++V Y + G V++AR +FD +P KN+ +WNA++GG+ + + +A+K
Sbjct: 353 RNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVK 412
Query: 317 LFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG---SVRVSTALI 373
LF +M+ +A+V PN VT L+VL A A G L GW + F ++ G +I
Sbjct: 413 LFEKMI-AANVAPNHVTFLAVLSACAYSG-LSEQGW-EIFLSMSEVHGIKPRAMHYACMI 469
Query: 374 DMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMIRE--GFRP 430
++ + G + A P K T + W AL+N R +E LE+ ++ + G P
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA----CRMQENLELGRVVAEKLYGMGP 525
Query: 431 NEI-TMIGVLSACNHCGLVDEGRRCFKAMEGFGIA 464
++ + + + N G E + +E G++
Sbjct: 526 EKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLS 560
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 259/539 (48%), Gaps = 20/539 (3%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
ARR FD RD N+MI + + E +F + + FKP T
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE----------NLDQFKPDLLTV 310
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+++++ C ++ +K GF L+ V L+D+Y K G + +AR VF+ M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDL 255
+ VSW ++I GY + GD+ EA KLF +M + D + ++I +L + + L
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 256 F-DKMRDKNVISWT---SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ ++ I + +++ Y + G+V + +F M + TWN +I +
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
L++ +M S V P+ T L LP A L A LG I R + +++ A
Sbjct: 491 ATGLQVTTQMRKSEVV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNA 549
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
LI+MY+KCG + + +FE M ++ +W +I + + G ++ALE F M + G P+
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPD 609
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
+ I ++ AC+H GLVDEG CF+ M+ + I P IEHY C+VDLL R+ + +AE I
Sbjct: 610 SVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFI 669
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
Q MP + I +S L AC D+ AERV R +++ + G +L N YA ++W
Sbjct: 670 QAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWD 729
Query: 551 DVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
V ++ +K + K S IEV F +GD E I +L L+ M E
Sbjct: 730 KVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 233/511 (45%), Gaps = 30/511 (5%)
Query: 27 SKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDA 86
S + L +IHA ++ +D++ K I S E S + RR A
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLID-------KYSHFREPASSLSVFRRVSPA 68
Query: 87 THKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGC 146
++ +L NS+I F E + L R ++P K +TF +++K C
Sbjct: 69 ---KNVYLWNSIIRAFSKNGLFPEALEFYGKL------RESKVSPDK---YTFPSVIKAC 116
Query: 147 TACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWT 206
G V+ + GF DL+V ALVDMY + G+L AR+VFDEM R VSW
Sbjct: 117 AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 207 AVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDL----FDK 258
++I GY+ G EA +++ + D + ++ + L + Q L
Sbjct: 177 SLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKS 236
Query: 259 MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLF 318
+ V+ +V+ Y + AR +FD M ++ ++N MI G+ K + E++++F
Sbjct: 237 GVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF 296
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
E L +P+ +T+ SVL A L L L +I + + V LID+YAK
Sbjct: 297 LENL--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAK 354
Query: 379 CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGV 438
CG++ AR +F M K+T SWN++I+G+ +G EA+++F+MM+ + + IT + +
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 439 LSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDAN 498
+S + G+ GI + ++D+ + G + ++ + +M +
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGD 473
Query: 499 GIILSSFLFACGHFKDVSRAERVLRETVKME 529
+ ++ + AC F D + +V + K E
Sbjct: 474 TVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/488 (29%), Positives = 250/488 (51%), Gaps = 42/488 (8%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G ++HG +K GF L V + L+ MY G + A+KVF + +R+ V + +++ G
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 215 CGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR-------------- 260
CG + +A +LF M E+D ++ MI G + G A + F +M+
Sbjct: 218 CGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 261 -------------------------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
++ ++++ YC+ + A+ +FD M +KN+
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+W AM+ G+ + + EA+K+F +M S ++P+ TL + A A++ +L+ G G
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSG-IDPDHYTLGQAISACANVSSLEEGSQFHG 395
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
A L V VS +L+ +Y KCG+I + LF EM ++ SW A+++ +A GRA E
Sbjct: 396 KAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVE 455
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMV 474
+++F+ M++ G +P+ +T+ GV+SAC+ GLV++G+R FK M +GI P I HY CM+
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 475 DLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAG 534
DL R+G L+EA I MPF + I ++ L AC + ++ + ++++
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 535 DYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEV 594
Y LL ++YA++ +W V ++ M+ + KE S I+ G+ F A D L+
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 635
Query: 595 IQLTLGQL 602
I L +L
Sbjct: 636 IYAKLEEL 643
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 82/432 (18%)
Query: 139 FTALVKGCTACMATREGLEV---HGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
++ +K C A + V HG ++ + ++ +V Y AR+VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
+ + + SW +++ Y++ G +SE F+ +P+RD +NV+I+GY G + A
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 256 FDK-MRDKNV-------------------ISWTSMVSG--------------------YC 275
++ MRD + +S + G Y
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 276 QNGDVESARLMFDLMPEKNLFTWNAMIG------------------------------GH 305
G + A+ +F + ++N +N+++G G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+N EA++ FREM + ++ ++ SVLPA LGA++ G I R
Sbjct: 246 AQNGLAKEAIECFREMKVQG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+ V +ALIDMY KC + A+ +F+ M +K SW A++ G+ GRA+EA+++F M R
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHY----GCMVDLLGRAG 481
G P+ T+ +SAC + ++EG + G I + HY +V L G+ G
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQ----FHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 482 CLDEAENLIQTM 493
+D++ L M
Sbjct: 421 DIDDSTRLFNEM 432
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 200/487 (41%), Gaps = 96/487 (19%)
Query: 74 VSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTAT--------- 124
V + A++ F R+ + NS++ A + LFR + + + +
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 125 ------------RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLY 172
R M + K + F +++ C A EG ++H ++ F +Y
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP--- 229
V +AL+DMY K L A+ VFD M +++ VSWTA++VGY + G EA K+F M
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 230 -ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW----TSMVSGYCQNGDVESAR 284
+ D I + ++ K +I + S+V+ Y + GD++ +
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 285 LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
+F+ M ++ +W AM+ + + + E ++LF +M+ ++P+ VTL V+ A +
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRA 485
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
G ++ G R KL + Y IG ++ +I
Sbjct: 486 GLVEKG------QRYFKL---------MTSEYGIVPSIGH---------------YSCMI 515
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIA 464
+ F+ +GR +EA+ M F P+ I +LSAC + G ++ G+
Sbjct: 516 DLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWA---------- 562
Query: 465 PQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC-GHFKDVSRAERVLR 523
AE+LI+ P G L S ++A G + V++ R +R
Sbjct: 563 ---------------------AESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMR 601
Query: 524 E-TVKME 529
E VK E
Sbjct: 602 EKNVKKE 608
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 228 MPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMF 287
+P + +N ++ Y + A+ +FD++ N+ SW +++ Y + G + F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
+ +P+++ TWN +I G+ + A+K + M+ S VTL+++L + G +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 348 DLGGWIQGFARRKKLDGSVRVSTALIDMYAK----------------------------- 378
LG I G + + + V + L+ MYA
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 379 --CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
CG I A LF M EK++ SW A+I G A NG AKEA+E F M +G + ++
Sbjct: 216 LACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFD 496
VL AC G ++EG++ + I ++D+ + CL A+ + M
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK-Q 333
Query: 497 ANGIILSSFLFACGHFKDVSRAERVLRETVKMEKE 531
N + ++ + G RAE ++ + M++
Sbjct: 334 KNVVSWTAMVVGYGQ---TGRAEEAVKIFLDMQRS 365
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 177/600 (29%), Positives = 278/600 (46%), Gaps = 85/600 (14%)
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTAL 142
FFD +RD +MI + I Q+ + + D+ + +P T T +
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK---------EGIEPTQFTLTNV 152
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD------- 195
+ A G +VH VK G ++ V+ +L++MY K G A+ VFD
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 196 ------------------------EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM--- 228
+M+ER V+W ++I G+ + G A +F M
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 229 ----PER-------------------------------DVAA--FNVMIDGYVKLGCMDM 251
P+R D++ N +I Y + G ++
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 252 AQDLFDK--MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
A+ L ++ +D + +T+++ GY + GD+ A+ +F + ++++ W AMI G+ ++
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
EA+ LFR M+ PN TL ++L + L +L G I G A + SV VS
Sbjct: 393 SYGEAINLFRSMV-GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 370 TALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
ALI MYAK G I A F+ + E++T SW ++I A +G A+EALE+FE M+ EG
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG-IAPQIEHYGCMVDLLGRAGCLDEAE 487
RP+ IT +GV SAC H GLV++GR+ F M+ I P + HY CMVDL GRAG L EA+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 488 NLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEK 547
I+ MP + + + S L AC K++ + + +E E +G Y L NLY+
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 548 RWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
+W + ++ MK KE S IEV + F D H I +T+ ++W +K
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 188/475 (39%), Gaps = 104/475 (21%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
VH +K+G +Y+ L+++Y K G ARK+FDEM R+ SW V+ Y++ GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 218 MSEARKLFDVMPERDVAAFNVMIDGYVKLG------------------------------ 247
M + FD +P+RD ++ MI GY +G
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 248 -----CMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFD---------- 288
CM+ + + + NV S+++ Y + GD A+ +FD
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 289 ---------------------LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
M E+++ TWN+MI G + AL +F +ML + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
P+ TL SVL A A+L L +G I D S V ALI MY++CG + AR
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 388 LFEE---------------------------------MPEKETASWNALINGFAVNGRAK 414
L E+ + +++ +W A+I G+ +G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMV 474
EA+ +F M+ G RPN T+ +LS + + G++ + G + ++
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 475 DLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
+ +AG + A + + + + +S + A A + ET+ ME
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF-ETMLME 509
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 169/400 (42%), Gaps = 72/400 (18%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-----RDLC-----------RGTA 123
A+ FD RD N+MI H + Q F RD+ RG
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 124 TRTMTM-------TPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
R + + + P T +++ C G ++H V GF + V A
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRV--SWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
L+ MY + G + +AR++ ++ + +TA++ GY + GDM++A+ +F + +RDV
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSM-------------------- 270
A+ MI GY + G A +LF M + N + +M
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 271 ---------------VSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGGHCKNKQPHEA 314
++ Y + G++ SA FDL+ E++ +W +MI ++ EA
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST---A 371
L+LF MLM + P+ +T + V A G ++ G Q F K +D + +
Sbjct: 500 LELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGR--QYFDMMKDVDKIIPTLSHYAC 556
Query: 372 LIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVN 410
++D++ + G + A+ E+MP E + +W +L++ V+
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 28/303 (9%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ A+ F + RD +MI + + E LFR + G +P
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ---------RPNS 413
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+T A++ ++ + G ++HG AVK+G + V+ AL+ MY K G + SA + FD
Sbjct: 414 YTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDL 473
Query: 197 MS-ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGY----VKLGCMDM 251
+ ER VSWT++I+ + G EA +LF+ M + ++ G G ++
Sbjct: 474 IRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQ 533
Query: 252 AQDLFDKMRDKNVI-----SWTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGGH 305
+ FD M+D + I + MV + + G ++ A+ + MP E ++ TW +++
Sbjct: 534 GRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA- 592
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL-DG 364
C+ + + K+ E L+ +EP S A+A+L + G W + RK + DG
Sbjct: 593 CRVHKNIDLGKVAAERLL--LLEPENSGAYS---ALANLYSA-CGKWEEAAKIRKSMKDG 646
Query: 365 SVR 367
V+
Sbjct: 647 RVK 649
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 206/367 (56%), Gaps = 4/367 (1%)
Query: 246 LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
LG + + +F + + T+++ Y + A +FD +P+++ +WN + +
Sbjct: 130 LGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCY 189
Query: 306 CKNKQPHEALKLFREML--MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
+NK+ + L LF +M + V+P+ VT L L A A+LGALD G + F L
Sbjct: 190 LRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLS 249
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
G++ +S L+ MY++CG + +A +F M E+ SW ALI+G A+NG KEA+E F M
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG--FGIAPQIEHYGCMVDLLGRAG 481
++ G P E T+ G+LSAC+H GLV EG F M F I P + HYGC+VDLLGRA
Sbjct: 310 LKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRAR 369
Query: 482 CLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRN 541
LD+A +LI++M + I + L AC DV ERV+ ++++ E AGDYVLL N
Sbjct: 370 LLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLN 429
Query: 542 LYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQ 601
Y+T +W V +++ +MK + + + CS IE+ G EF+ D H E I L +
Sbjct: 430 TYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAE 489
Query: 602 LWKHMKV 608
+ + +K+
Sbjct: 490 INQQLKI 496
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 37/408 (9%)
Query: 34 LLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEF 93
L QIHA +LR S+ N ++ F++ +A+S R+ + ++ R F
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLS---RLALSLIPRD-----INYSCRVFSQRLNPTLS 78
Query: 94 LCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
CN+MI + E F LFR L R ++ P P +F +K C
Sbjct: 79 HCNTMIRAFSLSQTPCEGFRLFRSLRRNSSL------PANPLSSSFA--LKCCIKSGDLL 130
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
GL++HG +GF D + T L+D+Y A KVFDE+ +R VSW + Y
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 214 RCGDMSEARKLFDVMP-------ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS 266
R + LFD M + D + + LG +D + + D + D+N +S
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI-DENGLS 249
Query: 267 W-----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
++VS Y + G ++ A +F M E+N+ +W A+I G N EA++ F EM
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM 309
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK----KLDGSVRVSTALIDMYA 377
L + P E TL +L A + G + G + F R + K+ ++ ++D+
Sbjct: 310 L-KFGISPEEQTLTGLLSACSHSGLVAEG--MMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 378 KCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMI 424
+ + +A L + M K ++ W L+ V+G + V +I
Sbjct: 367 RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLI 414
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N MI ++ P E +LFR + ++S+ N ++ L G L G I G
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALE 418
+ T L+D+Y+ C A +F+E+P+++T SWN L + + N R ++ L
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 419 VFEMM---IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
+F+ M + +P+ +T + L AC + G +D G++ ++ G++ + +V
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 476 LLGRAGCLDEAENLIQTM 493
+ R G +D+A + M
Sbjct: 261 MYSRCGSMDKAYQVFYGM 278
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 26/262 (9%)
Query: 3 DESPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCAS 62
+ S P L S+ KC C + LQIH + + ++ L+ + ++
Sbjct: 106 NSSLPANPLSSSFALKC-----CIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYST 160
Query: 63 IAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGT 122
ST A + FD KRD N + + + ++ + LF +
Sbjct: 161 CENSTD-----------ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM---- 205
Query: 123 ATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYV 182
+ KP G T ++ C A G +VH +NG L ++ LV MY
Sbjct: 206 --KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYS 263
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
+ G + A +VF M ER+ VSWTA+I G G EA + F+ M + ++ + G
Sbjct: 264 RCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTG 323
Query: 243 YVKL----GCMDMAQDLFDKMR 260
+ G + FD+MR
Sbjct: 324 LLSACSHSGLVAEGMMFFDRMR 345
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 169/601 (28%), Positives = 292/601 (48%), Gaps = 43/601 (7%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFF 84
C SK I +Q+H ++ + VD S +N +S+ RF
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVD-----------------FEGSIKNSLLSMYSKCGRFD 291
Query: 85 DATH------KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
DA+ + D N MI+ + E T F + M + P T
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE---------MISSGVLPDAIT 342
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
F++L+ + ++H +++ LD+++ +AL+D Y K + A+ +F + +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL--- 255
V +TA+I GY G ++ ++F + + ++ + + + + + +A L
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 256 -----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
K D +++ Y + G + A +F+ + ++++ +WN+MI ++
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
P A+ +FR+M +S + + V++ + L A A+L + G I GF + L V +
Sbjct: 523 PSAAIDIFRQMGVSG-ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSES 581
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF-EMMIREGFR 429
LIDMYAKCG + A +F+ M EK SWN++I +G+ K++L +F EM+ + G R
Sbjct: 582 TLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIR 641
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
P++IT + ++S+C H G VDEG R F++M E +GI PQ EHY C+VDL GRAG L EA
Sbjct: 642 PDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYE 701
Query: 489 LIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKR 548
+++MPF + + + L AC K+V AE + + ++ +G YVL+ N +A +
Sbjct: 702 TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANARE 761
Query: 549 WTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKV 608
W V V+ +MK R K S IE++ R FV+GD H I L L +++
Sbjct: 762 WESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Query: 609 E 609
E
Sbjct: 822 E 822
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 197/412 (47%), Gaps = 14/412 (3%)
Query: 126 TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFG 185
M M P TF ++ C + + G+++HG+ V +G + + +L+ MY K G
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF------DVMPERDVAAFNVM 239
A K+F MS V+W +I GY + G M E+ F V+P D F+ +
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP--DAITFSSL 346
Query: 240 IDGYVKLGCMDMAQDLFDK-MRDK---NVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
+ K ++ + + MR ++ ++++ Y + V A+ +F ++
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+ AMI G+ N ++L++FR L+ + PNE+TL+S+LP + L AL LG + G
Sbjct: 407 VVFTAMISGYLHNGLYIDSLEMFR-WLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
F +K D + A+IDMYAKCG + A +FE + +++ SWN++I A +
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSA 525
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
A+++F M G + +++ LSAC + G+ M +A + ++D
Sbjct: 526 AIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLID 585
Query: 476 LLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
+ + G L A N+ +TM + N + +S + ACG+ + + + E V+
Sbjct: 586 MYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/534 (23%), Positives = 243/534 (45%), Gaps = 45/534 (8%)
Query: 8 QRTLWSTAERKCLDLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFI---TTCASI 63
R L T R+ LLQ C + + Q+HAF++ NS+ + + + C S
Sbjct: 27 SRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSF 86
Query: 64 AVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
+ + + + R + R +++ F+ N ++ A F+ LC G +
Sbjct: 87 S-DCGKMFYRLDLRRSSIRPWNSI--ISSFVRNGLLNQALAF--------YFKMLCFGVS 135
Query: 124 TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKN-GFCLDLYVATALVDMYV 182
P TF LVK C A + +G++ V + G + +VA++L+ Y+
Sbjct: 136 ----------PDVSTFPCLVKACVA-LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYL 184
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
++G + K+FD + ++ V W ++ GY +CG + K F VM ++ V D
Sbjct: 185 EYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDC 244
Query: 243 YVKLGCMDMAQDLFDKMRDKNVISW--------TSMVSGYCQNGDVESARLMFDLMPEKN 294
+ + + DL ++ V+S S++S Y + G + A +F +M +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
TWN MI G+ ++ E+L F EM+ S+ V P+ +T S+LP+V+ L+ I
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMI-SSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
+ R + + +++ALID Y KC + A+ +F + + + A+I+G+ NG
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE---HYG 471
++LE+F +++ PNEIT++ +L + GR + GF I + + G
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE----LHGFIIKKGFDNRCNIG 479
Query: 472 C-MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
C ++D+ + G ++ A + + + + + +S + C + S A + R+
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDIFRQ 532
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/518 (29%), Positives = 239/518 (46%), Gaps = 71/518 (13%)
Query: 117 DLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
DL T++ + + + L+K CT +G VH +++ F D+ +
Sbjct: 41 DLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNT 100
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF 236
L++MY K CG + EARK+F+ MP+RD +
Sbjct: 101 LLNMYAK-------------------------------CGSLEEARKVFEKMPQRDFVTW 129
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMR------------------------------------ 260
+I GY + A F++M
Sbjct: 130 TTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK 189
Query: 261 ---DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
D NV ++++ Y + G ++ A+L+FD + +N +WNA+I GH + +AL+L
Sbjct: 190 CGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALEL 249
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
F+ ML P+ + S+ A + G L+ G W+ + + L+DMYA
Sbjct: 250 FQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYA 308
Query: 378 KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
K G I AR +F+ + +++ SWN+L+ +A +G KEA+ FE M R G RPNEI+ +
Sbjct: 309 KSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLS 368
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
VL+AC+H GL+DEG ++ M+ GI P+ HY +VDLLGRAG L+ A I+ MP +
Sbjct: 369 VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEP 428
Query: 498 NGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKH 557
I + L AC K+ +++ + G +V+L N+YA+ RW D V+
Sbjct: 429 TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRK 488
Query: 558 MMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVI 595
MK G KE ACS +E++ FVA D H E I
Sbjct: 489 KMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 29/278 (10%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+H F ++ D+N+++ + + ++ A+ FDA R++
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYG-----------LMDDAQLVFDALESRNDVSW 230
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N++I H + LF+ + R F+P ++ +L C++ +G
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDG---------FRPSHFSYASLFGACSSTGFLEQG 281
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
VH +K+G L + L+DMY K G + ARK+FD +++R VSW +++ Y +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH 341
Query: 216 GDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS----W 267
G EA F+ M + +F ++ G +D ++ M+ ++ +
Sbjct: 342 GFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHY 401
Query: 268 TSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGG 304
++V + GD+ A + MP E W A++
Sbjct: 402 VTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 291/596 (48%), Gaps = 77/596 (12%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+HA + + ++ + L+ K +T + A +++ A+ + +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYS-----------AFNLLDEAQTITENSEILHPLPW 152
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N +I ++ ++F E ++++ M + T+ +++K C A + G
Sbjct: 153 NVLIGSYIRNKRFQESVSVYK---------RMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 156 LEVHG-VAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
VHG + V + C +LYV AL+ MY +FG + AR++FD MSER VSW A+I YT
Sbjct: 204 RVVHGSIEVSSHRC-NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 215 CGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV------ 264
+ EA KL D M E + +N + G ++ G A + MR+ NV
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 265 -------------ISW----------------------TSMVSGYCQNGDVESARLMFDL 289
+ W S+++ Y + D+ A ++F
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
+ +L TWN++I G N++ E L +EML+S PN +TL S+LP A +G L
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQH 441
Query: 350 GGWIQGFA-RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
G + RR+ + + +L+DMYAK GEI A+ +F+ M +++ ++ +LI+G+
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQI 467
G+ + AL F+ M R G +P+ +TM+ VLSAC+H LV EG F ME FGI ++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS----RAERVLR 523
EHY CMVDL RAG LD+A ++ T+P++ + + ++ L AC + + A+++L
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 524 ETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRF 579
ET + E G Y+LL ++YA W+ + VK ++ G K +++E D
Sbjct: 622 ET---KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 176/426 (41%), Gaps = 60/426 (14%)
Query: 123 ATRTMTMTPFKPGGHTFT-----ALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
A RT ++ ++ G H F +L+ C G ++H + +G D + L
Sbjct: 65 AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKL 124
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN 237
V Y F +L A+ + + + W +I Y R E+ ++ M + + A
Sbjct: 125 VTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADE 184
Query: 238 VMIDGYVKLGCMDMAQDLFDKMRDK---------NVISWTSMVSGYCQNGDVESARLMFD 288
+K C + + ++ N+ +++S Y + G V+ AR +FD
Sbjct: 185 FTYPSVIK-ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA----------------------- 325
M E++ +WNA+I + ++ EA KL M +S
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 326 -----------SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK-----KLDGSVRVS 369
+V V +++ L A + +GAL G R +D V
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---VR 360
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
+LI MY++C ++ A ++F+++ ++WN++I+GFA N R++E + + M+ GF
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 430 PNEITMIGVLSACNHCGLVDEGR--RCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
PN IT+ +L G + G+ C+ + + + +VD+ ++G + A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCY-ILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 488 NLIQTM 493
+ +M
Sbjct: 480 RVFDSM 485
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 33/267 (12%)
Query: 35 LQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFL 94
L I + + +DN N L + C+ + RHA F
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDL--------------RHAFIVFQQVEANSLST 390
Query: 95 CNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATRE 154
NS+I+ FA + SE + + M ++ F P T +++ +
Sbjct: 391 WNSIISG-FAYNERSEETSFL--------LKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 155 GLEVHGVAVKNGFCLD-LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
G E H ++ D L + +LVDMY K G + +A++VFD M +R +V++T++I GY
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 214 RCGDMSEARKLFDVMPERDVAAFNV-MIDGYVKLGCMDMAQD---LFDKMRDKNVI---- 265
R G A F M + +V M+ ++ ++ LF KM I
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 266 -SWTSMVSGYCQNGDVESARLMFDLMP 291
++ MV YC+ G ++ AR +F +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 291/596 (48%), Gaps = 77/596 (12%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
Q+HA + + ++ + L+ K +T + A +++ A+ + +
Sbjct: 104 QLHAHCISSGLEFDSVLVPKLVTFYS-----------AFNLLDEAQTITENSEILHPLPW 152
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N +I ++ ++F E ++++ M + T+ +++K C A + G
Sbjct: 153 NVLIGSYIRNKRFQESVSVYK---------RMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 156 LEVHG-VAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
VHG + V + C +LYV AL+ MY +FG + AR++FD MSER VSW A+I YT
Sbjct: 204 RVVHGSIEVSSHRC-NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 215 CGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV------ 264
+ EA KL D M E + +N + G ++ G A + MR+ NV
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 265 -------------ISW----------------------TSMVSGYCQNGDVESARLMFDL 289
+ W S+++ Y + D+ A ++F
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
+ +L TWN++I G N++ E L +EML+S PN +TL S+LP A +G L
Sbjct: 383 VEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQH 441
Query: 350 GGWIQGFA-RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
G + RR+ + + +L+DMYAK GEI A+ +F+ M +++ ++ +LI+G+
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQI 467
G+ + AL F+ M R G +P+ +TM+ VLSAC+H LV EG F ME FGI ++
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS----RAERVLR 523
EHY CMVDL RAG LD+A ++ T+P++ + + ++ L AC + + A+++L
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLL 621
Query: 524 ETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRF 579
ET + E G Y+LL ++YA W+ + VK ++ G K +++E D
Sbjct: 622 ET---KPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 176/426 (41%), Gaps = 60/426 (14%)
Query: 123 ATRTMTMTPFKPGGHTFT-----ALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
A RT ++ ++ G H F +L+ C G ++H + +G D + L
Sbjct: 65 AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKL 124
Query: 178 VDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN 237
V Y F +L A+ + + + W +I Y R E+ ++ M + + A
Sbjct: 125 VTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADE 184
Query: 238 VMIDGYVKLGCMDMAQDLFDKMRDK---------NVISWTSMVSGYCQNGDVESARLMFD 288
+K C + + ++ N+ +++S Y + G V+ AR +FD
Sbjct: 185 FTYPSVIK-ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA----------------------- 325
M E++ +WNA+I + ++ EA KL M +S
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 326 -----------SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK-----KLDGSVRVS 369
+V V +++ L A + +GAL G R +D V
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---VR 360
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
+LI MY++C ++ A ++F+++ ++WN++I+GFA N R++E + + M+ GF
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 430 PNEITMIGVLSACNHCGLVDEGR--RCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
PN IT+ +L G + G+ C+ + + + +VD+ ++G + A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCY-ILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 488 NLIQTM 493
+ +M
Sbjct: 480 RVFDSM 485
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 111/267 (41%), Gaps = 33/267 (12%)
Query: 35 LQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFL 94
L I + + +DN N L + C+ + RHA F
Sbjct: 345 LVIRSCSFSHDIDNVRNSLITMYSRCSDL--------------RHAFIVFQQVEANSLST 390
Query: 95 CNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATRE 154
NS+I+ FA + SE + + M ++ F P T +++ +
Sbjct: 391 WNSIISG-FAYNERSEETSFL--------LKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 155 GLEVHGVAVKNGFCLD-LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
G E H ++ D L + +LVDMY K G + +A++VFD M +R +V++T++I GY
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 214 RCGDMSEARKLFDVMPERDVAAFNV-MIDGYVKLGCMDMAQD---LFDKMRDKNVI---- 265
R G A F M + +V M+ ++ ++ LF KM I
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 266 -SWTSMVSGYCQNGDVESARLMFDLMP 291
++ MV YC+ G ++ AR +F +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 43/463 (9%)
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
KV +S R ++ Y R G A KLFD MPERD+ ++N +I GY G +
Sbjct: 56 KVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGK 115
Query: 252 AQDLFDKMR------DKNVISWTSMVSG-------------------------------- 273
++ +M N +++ SM+S
Sbjct: 116 CFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF 175
Query: 274 ---YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
Y + GD+ S+ +F+ + KNL +WN MI H +N + L F M EP+
Sbjct: 176 INWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPD 234
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
+ T L+VL + D+G + L I G G+ ++TAL+D+Y+K G + + +F
Sbjct: 235 QATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFH 294
Query: 391 EMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDE 450
E+ ++ +W A++ +A +G ++A++ FE+M+ G P+ +T +L+AC+H GLV+E
Sbjct: 295 EITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEE 354
Query: 451 GRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC 509
G+ F+ M + I P+++HY CMVDLLGR+G L +A LI+ MP + + + + L AC
Sbjct: 355 GKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGAC 414
Query: 510 GHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVA 569
+KD + ++E +YV+L N+Y+ W D ++++MK +G +
Sbjct: 415 RVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASG 474
Query: 570 CSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVEIIY 612
CS IE + +FV GD+ H E IQ L ++ K MK E+ Y
Sbjct: 475 CSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGY 517
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 205/467 (43%), Gaps = 55/467 (11%)
Query: 44 NSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIV--RH-------------------ARR 82
+S+D N++ L + +C SI + + V V RH A +
Sbjct: 28 HSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEK 87
Query: 83 FFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTAL 142
FD +RD NS+I+ + + F + + ++ F+P TF ++
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRM-------MISEVGFRPNEVTFLSM 140
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR 202
+ C + EG +HG+ +K G ++ V A ++ Y K G L S+ K+F+++S ++
Sbjct: 141 ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 203 VSWTAVIVGYTRCGDMSEARKLFD----VMPERDVAAFNVMIDGYVKLGCMDMAQDL--- 255
VSW +IV + + G + F+ V E D A F ++ +G + +AQ +
Sbjct: 201 VSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 256 --FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHE 313
F I+ T+++ Y + G +E + +F + + W AM+ + + +
Sbjct: 261 IMFGGFSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRD 319
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG-WIQGFARRKKLDGSVRVSTAL 372
A+K F E+++ + P+ VT +L A + G ++ G + + ++R ++D + + +
Sbjct: 320 AIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 373 IDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGR----AKEALEVFEMMIREG 427
+D+ + G + A L +EMP E + W AL+ V K A +FE+ R+G
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIA-----PQIEH 469
N + + + SA GL + R M+ G+ IEH
Sbjct: 439 --RNYVMLSNIYSA---SGLWKDASRIRNLMKQKGLVRASGCSYIEH 480
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 240/461 (52%), Gaps = 52/461 (11%)
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIV 210
A + G ++H +K GF DL ++ L+ +++K G L AR+VFDE+ + + ++ +I
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 211 GYTRCG----------------------------DMSEARKLFDVMP------------- 229
GY + G S +R ++P
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 230 ---ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLM 286
E D ++D YVK G ++ A+ +F+ M+D+NV+ TSM+SGY G VE A +
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 287 FDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS---ASVEPNEVTLLSVLPAVAD 343
F+ K++ +NAM+ G ++ E K +M +S A PN T SV+ A +
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSG---ETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 344 LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNAL 403
L + ++G + + + +++ ++L+DMYAKCG I AR +F++M EK SW ++
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSM 345
Query: 404 INGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFG 462
I+G+ NG +EALE+F M PN +T +G LSAC+H GLVD+G F++M+ +
Sbjct: 346 IDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYS 405
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVL 522
+ P++EHY C+VDL+GRAG L++A + MP + I ++ L +C +V A
Sbjct: 406 MKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAA 465
Query: 523 RETVKMEKEC-AGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
E K+ + G Y+ L N+YA+ +W +V ++ +MK R
Sbjct: 466 SELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRR 506
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 192/441 (43%), Gaps = 78/441 (17%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFIT---TCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
+IHA +++ +LN+ K + C ++ +AR+ FD K
Sbjct: 55 KIHADIIKTGFQPDLNISIKLLILHLKCGCLS--------------YARQVFDELPKPTL 100
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK-----GCT 147
N MI+ + E L + M+ + K G+T + ++K G T
Sbjct: 101 SAYNYMISGYLKHGLVKELLLL---------VQRMSYSGEKADGYTLSMVLKASNSRGST 151
Query: 148 ACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTA 207
+ VH +K LD + TALVD YVK G L SAR VF+ M + + V T+
Sbjct: 152 MILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTS 211
Query: 208 VIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLG-CMDMAQDLFDKMR----DK 262
+I GY G + +A ++F+ +D+ +N M++G+ + G + D++ M+
Sbjct: 212 MISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP 271
Query: 263 NVISWTSMVSG-----------------------------------YCQNGDVESARLMF 287
N+ ++ S++ Y + G + AR +F
Sbjct: 272 NISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVF 331
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
D M EKN+F+W +MI G+ KN P EAL+LF M +EPN VT L L A + G +
Sbjct: 332 DQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM-KEFRIEPNYVTFLGALSACSHSGLV 390
Query: 348 DLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALIN 405
D G I + R + + ++D+ + G++ +A MPE+ + W AL++
Sbjct: 391 DKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLS 450
Query: 406 GFAVNGRAK----EALEVFEM 422
++G + A E+F++
Sbjct: 451 SCNLHGNVELASIAASELFKL 471
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 194/659 (29%), Positives = 309/659 (46%), Gaps = 110/659 (16%)
Query: 5 SPPQRTLW------STAERKCLDLL-QCKSKKTITTLLQIHAFMLRNSVDNN-------L 50
S P RT + S ER + L C S +T QIH +L++ +D+N L
Sbjct: 24 SAPSRTHFDFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVL 83
Query: 51 NLLAK--FITTCASIAVSTSRRNEAV------SIVRHAR-----RFFDATHKRDEFLCNS 97
N+ AK + S+ ++ + A VR R + FD +R +
Sbjct: 84 NMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTT 143
Query: 98 MITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLE 157
+I + Q+SE LFR++ R + + + T ++ C+ +
Sbjct: 144 LIKGYAQNNQWSEAMELFREM------RNLGIMLNEV---TLATVISACSHLGGIWDCRM 194
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV-------------- 203
+ +A+K ++V+T L+ MY L ARK+FDEM ER+ V
Sbjct: 195 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 254
Query: 204 -----------------SWTAVIVG-------------YT---RCG---------DM--- 218
SW +I G YT RCG D+
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 219 -------SEARKLFDVMPERDVAAFN----VMIDGYVKLGCMDMAQDLFDKMRDKNVISW 267
S+ +L + +R ++ +I Y + +A F+ ++ S
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
++++G+ +NG VE AR +FD +K++F+WNAMI G+ ++ P AL LFREM+ S+ V
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
+P+ +T++SV A++ LG+L+ G + + + ++ A+IDMYAKCG I A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 388 LFEE---MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
+F + + + WNA+I G A +G AK AL+++ + +PN IT +GVLSAC H
Sbjct: 495 IFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCH 554
Query: 445 CGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILS 503
GLV+ G+ F++M+ GI P I+HYGCMVDLLG+AG L+EA+ +I+ MP A+ +I
Sbjct: 555 AGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWG 614
Query: 504 SFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
L A +V AE E ++ G V+L N+YA RW DV V+ M+ R
Sbjct: 615 MLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 180/632 (28%), Positives = 293/632 (46%), Gaps = 55/632 (8%)
Query: 7 PQRTL--WSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIA 64
P R L WST CL+ + L++ M+ + V+ + + + CA +
Sbjct: 163 PVRDLVAWSTLVSSCLE------NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 65 VSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTAT 124
R+ I R+ FD DE LCNS++T + +F + + A
Sbjct: 217 CLRIARSVHGQI---TRKMFDL----DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 125 R----------------------TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVA 162
M + +P T +++ C REG VHG A
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 163 VKNGFCLDL-YVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEA 221
V+ + ++ ALV++Y + G L V +S+R+ V+W ++I Y G + +A
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 222 RKLFDVMPERDVA--AFNVMID-------GYVKLGCMDMAQDLFDKMRDKNVISWTSMVS 272
LF M + + AF + G V LG + + D+ V S++
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV--QNSLID 447
Query: 273 GYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
Y ++G V+SA +F+ + +++ TWN+M+ G +N EA+ LF M S +E NEV
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEV 506
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDG--SVRVSTALIDMYAKCGEIGRARLLFE 390
T L+V+ A + +G+L+ G W+ + + G + TALIDMYAKCG++ A +F
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVH---HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 391 EMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDE 450
M + SW+++IN + ++GR A+ F M+ G +PNE+ + VLSAC H G V+E
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 451 GRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG 510
G+ F M+ FG++P EH+ C +DLL R+G L EA I+ MPF A+ + S + C
Sbjct: 624 GKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Query: 511 HFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVAC 570
+ + + + + + + G Y LL N+YA E W + ++ MK K
Sbjct: 684 IHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGY 743
Query: 571 SVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
S IE+D + F AG+ + I LG L
Sbjct: 744 SAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 217/427 (50%), Gaps = 27/427 (6%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
+R F+A D F+ +I + L+ L + T ++ F F
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL----VSETTQISKF-----VF 103
Query: 140 TALVKGCTACMATRE----GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
++++ AC +RE G +VHG +K G D + T+L+ MY + G L A KVFD
Sbjct: 104 PSVLR---ACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFD 160
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDM 251
M R V+W+ ++ G++ +A ++F M E D +++G +LGC+ +
Sbjct: 161 GMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRI 220
Query: 252 AQDLFD----KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
A+ + KM D + S+++ Y + GD+ S+ +F+ + +KN +W AMI + +
Sbjct: 221 ARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVR 367
+ +AL+ F EM+ S +EPN VTL SVL + +G + G + GFA R++LD +
Sbjct: 281 GEFSEKALRSFSEMIKSG-IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 368 -VSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE 426
+S AL+++YA+CG++ + + ++ +WN+LI+ +A G +AL +F M+ +
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 427 GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
+P+ T+ +SAC + GLV G++ + ++ + ++D+ ++G +D A
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQ-NSLIDMYSKSGSVDSA 458
Query: 487 ENLIQTM 493
+ +
Sbjct: 459 STVFNQI 465
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 2/180 (1%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
T ++ Y G +S+RL+F+ P + F + +I + A+ L+ L+S +
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHR-LVSETT 96
Query: 328 EPNEVTLLSVLPAVA-DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+ ++ SVL A A L +GG + G + +D + T+L+ MY + G + A
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAE 156
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
+F+ MP ++ +W+ L++ NG +AL +F+ M+ +G P+ +TMI V+ C G
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 5/342 (1%)
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
E V ++ Y+ G M A +FD+M ++N ++W M++G GD E A +
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
MP + + +W +I G+ + +P EA+ LF M+ +++PNE+T+L++LPAV +LG L +
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 350 GGWIQGF-ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE--KETASWNALING 406
G + + +R + +RV+ +LID YAKCG I A F E+P K SW +I+
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF--KAMEGFGIA 464
FA++G KEA+ +F+ M R G +PN +TMI VL+AC+H GL +E F + + I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 465 PQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
P ++HYGC+VD+L R G L+EAE + +P + ++ L AC + D AERV R+
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 525 TVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYK 566
+++E+ GDYVL+ N++ R+ D + + M +RG K
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAK 496
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 49/303 (16%)
Query: 164 KNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARK 223
K GF +YV TALV MY+ G + A KVFDEM ER+ V+W +I G T GD +A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 224 LFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS-------------W--- 267
+ MP R V ++ +IDGY ++ A LF +M + I W
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 268 -------------------------TSMVSGYCQNGDVESARLMFDLMPE--KNLFTWNA 300
S++ Y + G ++SA F +P KNL +W
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF---A 357
MI + EA+ +F++M ++PN VT++SVL A + G L +++ F
Sbjct: 331 MISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMV 388
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGRAKEA 416
K+ V+ L+DM + G + A + E+P E++ W L+ +V A+ A
Sbjct: 389 NEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Query: 417 LEV 419
V
Sbjct: 449 ERV 451
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 241/451 (53%), Gaps = 15/451 (3%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P G + L+ M +G HG +++ F LD V +L+ MY KF +L A K+
Sbjct: 329 PDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 194 FDEMSER-SRVSWTAVIVGY------TRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
F +SE ++ +W ++ GY +C ++ RK+ ++ E D A+ +I +
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIEL--FRKIQNLGIEIDSASATSVISSCSHI 446
Query: 247 GCMDMAQDL----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
G + + + L D + S++ Y + GD+ A MF + N+ TWNAMI
Sbjct: 447 GAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMI 505
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
+ +Q +A+ LF M+ S + +P+ +TL+++L A + G+L+ G I + +
Sbjct: 506 ASYVHCEQSEKAIALFDRMV-SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
+ ++ +S ALIDMYAKCG + ++R LF+ +K+ WN +I+G+ ++G + A+ +F+
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQ 624
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGC 482
M +P T + +LSAC H GLV++G++ F M + + P ++HY C+VDLL R+G
Sbjct: 625 MEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGN 684
Query: 483 LDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
L+EAE+ + +MPF +G+I + L +C + R+ V + + G Y++L N+
Sbjct: 685 LEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANM 744
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVI 573
Y+ +W + E + MM+ G K SV+
Sbjct: 745 YSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 184/374 (49%), Gaps = 16/374 (4%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
KP T + C+ A +EG +HG AVKNG +V +++ Y K G A
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV-KLGCMDM 251
F E+ + SWT++I R GDM E+ +F M + + V+I + +LG M +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 252 AQD--LFDKMRDKNVISW-----TSMVSGYCQNGDVESARLMF-DLMPEKNLFTWNAMIG 303
F ++ S S++S YC+ + A +F + E N WN M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G+ K K + ++LFR+ + + +E + + SV+ + + +GA+ LG + + + LD
Sbjct: 407 GYGKMKCHVKCIELFRK-IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
++ V +LID+Y K G++ A +F E + +WNA+I + ++++A+ +F+ M
Sbjct: 466 LTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRM 524
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCL 483
+ E F+P+ IT++ +L AC + G ++ G+ + + + ++D+ + G L
Sbjct: 525 VSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHL 584
Query: 484 DEAENLIQTMPFDA 497
+++ L FDA
Sbjct: 585 EKSREL-----FDA 593
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 204/480 (42%), Gaps = 34/480 (7%)
Query: 20 LDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH 79
+ ++ C ++ +L + +A ++ + N+ + +K I++ AS
Sbjct: 29 ISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL----------- 77
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
+ R F +RD FL NS+I HF+ ++ F +M ++ P T
Sbjct: 78 SSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF---------FSMLLSGQSPDHFTA 128
Query: 140 TALVKGCTACMATREGLEVHGVAVKN-GFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+V C + G VHG+ +K+ GF + V + V Y K G L A VFDEM
Sbjct: 129 PMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188
Query: 199 ERSRVSWTAVIVGYTRCGD----MSEARKLFDVMPERDVAAFNVMIDGY---VKLGCMDM 251
+R V+WTA+I G+ + G+ + K+ + D + G+ LG +
Sbjct: 189 DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKE 248
Query: 252 AQDLFDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
+ L + S +SM S Y ++G+ A L F + ++++F+W ++I +
Sbjct: 249 GRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLAR 308
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVR 367
+ E+ +F EM + + P+ V + ++ + + + G GF R
Sbjct: 309 SGDMEESFDMFWEM-QNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDST 367
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEK-ETASWNALINGFAVNGRAKEALEVFEMMIRE 426
V +L+ MY K + A LF + E+ +WN ++ G+ + +E+F +
Sbjct: 368 VCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNL 427
Query: 427 GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
G + + V+S+C+H G V G+ + + I ++DL G+ G L A
Sbjct: 428 GIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVA 487
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N+MI ++ Q + LF M FKP T L+ C + G
Sbjct: 502 NAMIASYVHCEQSEKAIALFD---------RMVSENFKPSSITLVTLLMACVNTGSLERG 552
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
+H + ++L ++ AL+DMY K G L +R++FD +++ V W +I GY
Sbjct: 553 QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMH 612
Query: 216 GDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISW 267
GD+ A LFD M E DV F ++ G ++ + LF KM N+ +
Sbjct: 613 GDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHY 672
Query: 268 TSMVSGYCQNGDVESARLMFDLMP 291
+ +V ++G++E A MP
Sbjct: 673 SCLVDLLSRSGNLEEAESTVMSMP 696
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 258/551 (46%), Gaps = 83/551 (15%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
ARR F+A ++D NS++ + E LF++L F T
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL------------NFSADAITL 190
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGF----------------CLDLYVAT-------- 175
T ++K C A + G ++H + G C DL +A+
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 176 -------ALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
AL+ Y G + +R +FD S R + W ++I GY EA LF+ M
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 229 PER--------------------------------------DVAAFNVMIDGYVKLGCMD 250
D+ + ++D Y K G
Sbjct: 311 RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
A LF ++ + I SM+ Y G ++ A+ +F+ + K+L +WN+M G +N
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
E L+ F +M + +EV+L SV+ A A + +L+LG + A LD VS+
Sbjct: 431 TVETLEYFHQM-HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
+LID+Y KCG + R +F+ M + + WN++I+G+A NG+ EA+++F+ M G RP
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRP 549
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+IT + VL+ACN+CGLV+EGR+ F++M+ G P EH+ CMVDLL RAG ++EA NL
Sbjct: 550 TQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINL 609
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
++ MPFD +G + SS L C + ++ + +++E E + YV L ++AT W
Sbjct: 610 VEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Query: 550 TDVEDVKHMMK 560
V+ +M+
Sbjct: 670 ESSALVRKLMR 680
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 202/421 (47%), Gaps = 77/421 (18%)
Query: 139 FTALVKGCTACMATREGL--EVHGVAVKNGFCLDLY-VATALVDMYVKFGVLGSARKVFD 195
+ L++ C++ RE L + +G+ +K GF + VA L+ MY + G +G AR +FD
Sbjct: 29 YVRLLQSCSS--RNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFD 86
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
EM +R+ SW +I GY G+ + + FD+MPERD ++NV++ G+ K G + +A+ L
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
F+ M +K+V++ S++ GY NG E EAL
Sbjct: 147 FNAMPEKDVVTLNSLLHGYILNGYAE-------------------------------EAL 175
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+LF+E+ SA + +TL +VL A A+L AL G I ++ +++++L+++
Sbjct: 176 RLFKELNFSA----DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNV 231
Query: 376 YAKCGEIGRARLLFEEMPEKETAS-------------------------------WNALI 404
YAKCG++ A + E++ E + S WN++I
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIA 464
+G+ N EAL +F M R R + T+ V++AC G ++ G++ FG+
Sbjct: 292 SGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLI 350
Query: 465 PQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL---FACGHFKDVSRA-ER 520
I ++D+ + G EA L + + I+L+S + F+CG D R ER
Sbjct: 351 DDIVVASTLLDMYSKCGSPMEACKLFSEVE-SYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 521 V 521
+
Sbjct: 410 I 410
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 168/385 (43%), Gaps = 70/385 (18%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +R FD R L NSMI+ + A E LF ++ T +
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET----------REDS 318
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T A++ C G ++H A K G D+ VA+ L+DMY K G A K+F E
Sbjct: 319 RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE 378
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
+ + ++I Y CG + +A+++F+ + + + ++N M +G+ + GC + F
Sbjct: 379 VESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYF 438
Query: 257 DKMR---------------------------------------DKNVISWTSMVSGYCQN 277
+M D + + +S++ YC+
Sbjct: 439 HQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKC 498
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G VE R +FD M + + WN+MI G+ N Q EA+ LF++M + A + P ++T + V
Sbjct: 499 GFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSV-AGIRPTQITFMVV 557
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVS----------TALIDMYAKCGEIGRARL 387
L A G ++ G +KL S++V + ++D+ A+ G + A
Sbjct: 558 LTACNYCGLVEEG---------RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 388 LFEEMP-EKETASWNALINGFAVNG 411
L EEMP + + + W++++ G NG
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANG 633
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
L V V+ L+ MY++ G++G AR LF+EMP++ SWN +I G+ +G +L F+
Sbjct: 58 LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFD 117
Query: 422 MMI-REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGR 479
MM R+G+ N V+S G + RR F AM E + +G +++
Sbjct: 118 MMPERDGYSWNV-----VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN---- 168
Query: 480 AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
G +EA L + + F A+ I L++ L AC + + +++ + + EC
Sbjct: 169 -GYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 49/226 (21%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V H RR FD K DE NSMI+ + Q E LF + M++ +P
Sbjct: 501 VEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLF---------KKMSVAGIRPTQ 551
Query: 137 HTFTALVKGCTACMATREGLEV-HGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
TF ++ C C EG ++ + V +GF D + +VD+ + G + A + +
Sbjct: 552 ITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVE 611
Query: 196 EM------SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCM 249
EM S S + V GY G + A K+ ++ PE VA YV+L +
Sbjct: 612 EMPFDVDGSMWSSILRGCVANGYKAMGKKA-AEKIIELEPENSVA--------YVQLSAI 662
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
+ +GD ES+ L+ LM E N+
Sbjct: 663 ------------------------FATSGDWESSALVRKLMRENNV 684
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 295/618 (47%), Gaps = 50/618 (8%)
Query: 8 QRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRN-SVDNNLNLLAKFITTCASIAVS 66
RTL K L + K K+ IT QIHAF++ ++ N ++ I +C I
Sbjct: 11 HRTLLCPKRIKFLQSIS-KLKRHIT---QIHAFVISTGNLLNGSSISRDLIASCGRIGE- 65
Query: 67 TSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRT 126
+ +AR+ FD +R + NSMI + + E L+
Sbjct: 66 ----------ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQ--------- 106
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M +P TFT +K C + + +G V AV G+ D++V ++++++Y+K G
Sbjct: 107 MIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGK 166
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
+ A +F +M++R + WT ++ G+ + G +A + + M D V L
Sbjct: 167 MDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGR-----DRVVML 221
Query: 247 GCMDMAQDLFDKMRDK-------------NVISWTSMVSGYCQNGDVESARLMFDLMPEK 293
G + + DL D + NV+ TS+V Y + G +E A +F M K
Sbjct: 222 GLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK 281
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
+W ++I G +N ++A + EM S +P+ VTL+ VL A + +G+L G +
Sbjct: 282 TAVSWGSLISGFAQNGLANKAFEAVVEM-QSLGFQPDLVTLVGVLVACSQVGSLKTGRLV 340
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
+ ++ + V +TAL+DMY+KCG + +R +FE + K+ WN +I+ + ++G
Sbjct: 341 HCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG 399
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGC 472
+E + +F M P+ T +LSA +H GLV++G+ F M + I P +HY C
Sbjct: 400 QEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC 459
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
++DLL RAG ++EA ++I + D I + L C + +++S + + +++ +
Sbjct: 460 LIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDS 519
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNL 592
G L+ N +AT +W +V V+ +M+ K S IEV+G R F+ D H
Sbjct: 520 IGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHE- 578
Query: 593 EVIQLTLGQLWKHMKVEI 610
+ Q+ +++K EI
Sbjct: 579 ---HYHMLQVLRNLKTEI 593
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 225/472 (47%), Gaps = 42/472 (8%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M + P T + V C+ +G EVH +AVK GF D+ V +LVDMY
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMY--- 397
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV 244
++CG + +ARK+FD + +DV +N MI GY
Sbjct: 398 ----------------------------SKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 245 KLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMP-----EKNL 295
+ G A +LF +M+D N+I+W +M+SGY +NGD A +F M ++N
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNT 489
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
TWN +I G+ +N + EAL+LFR+M S + PN VT+LS+LPA A+L + I G
Sbjct: 490 ATWNLIIAGYIQNGKKDEALELFRKMQFSRFM-PNSVTILSLLPACANLLGAKMVREIHG 548
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
R+ LD V AL D YAK G+I +R +F M K+ +WN+LI G+ ++G
Sbjct: 549 CVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGP 608
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMV 474
AL +F M +G PN T+ ++ A G VDEG++ F ++ + I P +EH MV
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 475 DLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAG 534
L GRA L+EA IQ M + I SFL C D+ A +E E
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTA 728
Query: 535 DYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
++ +YA + + + K + S IEV F GD
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD 780
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 203/448 (45%), Gaps = 53/448 (11%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ AR+ FD+ +R+ F ++MI + ++ E LFR M P
Sbjct: 131 IADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR---------LMMKDGVLPDD 181
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
F +++GC C G +H V +K G L V+ +++ +Y K G L A K F
Sbjct: 182 FLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRR 241
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLGCMDMA 252
M ER ++W +V++ Y + G EA +L M + ++ +N++I GY +LG D A
Sbjct: 242 MRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA 301
Query: 253 QDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
DL KM +V +WT+M+SG NG
Sbjct: 302 MDLMQKMETFGITADVFTWTAMISGLIHNG------------------------------ 331
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
++AL +FR+M + A V PN VT++S + A + L ++ G + A + V V
Sbjct: 332 -MRYQALDMFRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+L+DMY+KCG++ AR +F+ + K+ +WN++I G+ G +A E+F M
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG-IAPQIEHYGCMVDLLGRAGCLDEAE 487
RPN IT ++S G E F+ ME G + + ++ + G DEA
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 488 NLIQTMPFD---ANGIILSSFLFACGHF 512
L + M F N + + S L AC +
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPACANL 537
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 160/325 (49%), Gaps = 11/325 (3%)
Query: 214 RCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDMAQDL---FDKMRDKNVIS 266
R G + EA K D + ++ + + +++ + G + + + L F + +V
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFV 117
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
T ++S Y + G + AR +FD M E+NLFTW+AMIG + + + E KLFR ++M
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFR-LMMKDG 176
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
V P++ +L A+ G ++ G I + + +RVS +++ +YAKCGE+ A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
F M E++ +WN+++ + NG+ +EA+E+ + M +EG P +T ++ N G
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLG 296
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA---NGIILS 503
D + ME FGI + + M+ L G +A ++ + M N + +
Sbjct: 297 KCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 504 SFLFACGHFKDVSRAERVLRETVKM 528
S + AC K +++ V VKM
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKM 381
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 237/479 (49%), Gaps = 52/479 (10%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
++ ARR FD + N ++ + + E +F M +P
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK---------MLELNVRPL 262
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
HT ++++ C+ +A G +H +AVK D V+T++ DMYVK L SAR+VFD
Sbjct: 263 NHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD 322
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
+ + SWT+ + GY G EAR+LFD+MPER++ ++N M+ GYV D A D
Sbjct: 323 QTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDF 382
Query: 256 FDKMR---------------------------------------DKNVISWTSMVSGYCQ 276
MR D NVI +++ Y +
Sbjct: 383 LTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGK 442
Query: 277 NGDVESARLMFDLMPE-KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLL 335
G ++SA + F M E ++ +WNA++ G + + +AL F M + A +P++ TL
Sbjct: 443 CGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLA 500
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
++L A++ AL+LG I GF R V + A++DMY+KC A +F+E +
Sbjct: 501 TLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR 560
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
+ WN++I G NGR+KE E+F ++ EG +P+ +T +G+L AC G V+ G + F
Sbjct: 561 DLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYF 620
Query: 456 KAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFK 513
+M + I+PQ+EHY CM++L + GCL + E + MPFD +L+ AC ++
Sbjct: 621 SSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYR 679
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 220/455 (48%), Gaps = 61/455 (13%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR F+ +RD N++IT E F +FR + R T T
Sbjct: 112 VDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATET-------- 163
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+F ++K C + R ++H VK G+ ++ + T++VD+Y K V+ AR+VFDE
Sbjct: 164 -SFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFN-----VMI----------- 240
+ S VSW ++ Y G EA +F M E +V N VM+
Sbjct: 223 IVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
Query: 241 -----------------------DGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN 277
D YVK ++ A+ +FD+ R K++ SWTS +SGY +
Sbjct: 283 KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMS 342
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP-NEVTLLS 336
G AR +FDLMPE+N+ +WNAM+GG+ + EAL LM +E + VTL+
Sbjct: 343 GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFL--TLMRQEIENIDNVTLVW 400
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE-K 395
+L + + + +G GF R D +V V+ AL+DMY KCG + A + F +M E +
Sbjct: 401 ILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELR 460
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
+ SWNAL+ G A GR+++AL FE M E +P++ T+ +L+ C + ++ G
Sbjct: 461 DEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG---- 515
Query: 456 KAMEGF----GIAPQIEHYGCMVDLLGRAGCLDEA 486
KA+ GF G + G MVD+ + C D A
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYA 550
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 170/410 (41%), Gaps = 40/410 (9%)
Query: 123 ATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYV 182
A + +P + L + C++ + +V V +++ ++ Y
Sbjct: 48 AVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYG 107
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
K G + AR++F+EM ER SW AVI + G E ++F M V A G
Sbjct: 108 KCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAG 167
Query: 243 YVKLGCMDMAQDLFDKMR--------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
+K + + L ++ NV TS+V Y + + AR +FD + +
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPS 227
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+WN ++ + + EA+ +F +ML +V P T+ SV+ A + AL++G I
Sbjct: 228 DVSWNVIVRRYLEMGFNDEAVVMFFKML-ELNVRPLNHTVSSVMLACSRSLALEVGKVIH 286
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE----------------------- 391
A + + VST++ DMY KC + AR +F++
Sbjct: 287 AIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 392 --------MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
MPE+ SWNA++ G+ EAL+ +M +E + +T++ +L+ C+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 444 HCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
V G++ + G + ++D+ G+ G L A + M
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 273/549 (49%), Gaps = 32/549 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +RR FD+ +R+ + N+MI + E LF + ++ +
Sbjct: 267 IESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE---AIGSKEIVSDEV---- 319
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T+ +A G + HG KN L + + +L+ MY + G + + VF
Sbjct: 320 -TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLS 378
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
M ER VSW +I + + G E L M ++ ID + A +L
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK-----IDYITVTALLSAASNLR 433
Query: 257 DKMRDKNVISW------------TSMVSGYCQNGDVESARLMFDL--MPEKNLFTWNAMI 302
+K K ++ + ++ Y ++G + ++ +F+ E++ TWN+MI
Sbjct: 434 NKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
G+ +N + +FR+ML ++ PN VT+ S+LPA + +G++DLG + GF+ R+ L
Sbjct: 494 SGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
D +V V++AL+DMY+K G I A +F + E+ + ++ +I G+ +G + A+ +F
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLS 612
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAG 481
M G +P+ IT + VLSAC++ GL+DEG + F+ M E + I P EHY C+ D+LGR G
Sbjct: 613 MQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVG 672
Query: 482 CLDEAENLIQTMPFDAN-GIILSSFLFACGHFKDVSRAERVLRETVKME--KECAGDYVL 538
++EA ++ + + N + S L +C ++ AE V K + K +G VL
Sbjct: 673 RVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVL 732
Query: 539 LRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLT 598
L N+YA E++W V+ V+ M+ +G KEV S IE+ G FV+ D H + I
Sbjct: 733 LSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDV 792
Query: 599 LGQLWKHMK 607
+ L K M+
Sbjct: 793 IDGLAKDMR 801
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 64/448 (14%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP-GGHT 138
AR+ FDA K L N++I F LF + TA PF +T
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIG-FICNNLPHEALLFYSRMKKTA-------PFTNCDAYT 109
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLD---LYVATALVDMYV---------KFGV 186
+++ +K C + G VH ++ CL V +L++MYV ++ V
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIR---CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDV 166
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----------------P- 229
+ RKVFD M ++ V+W +I Y + G +EA + F +M P
Sbjct: 167 V---RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 230 ---ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLM 286
R + NV +KLG + +DLF V+S S +S Y + GD+ES+R +
Sbjct: 224 VSISRSIKKANVFYGLMLKLGD-EYVKDLF-------VVS--SAISMYAELGDIESSRRV 273
Query: 287 FDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGA 346
FD E+N+ WN MIG + +N E+++LF E + S + +EVT L AV+ L
Sbjct: 274 FDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQ 333
Query: 347 LDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALING 406
++LG GF + + + + +L+ MY++CG + ++ +F M E++ SWN +I+
Sbjct: 334 VELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISA 393
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
F NG E L + M ++GF+ + IT+ +LSA ++ + K F I
Sbjct: 394 FVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL----RNKEIGKQTHAFLIRQG 449
Query: 467 IEHYGC---MVDLLGRAGCLDEAENLIQ 491
I+ G ++D+ ++G + ++ L +
Sbjct: 450 IQFEGMNSYLIDMYSKSGLIRISQKLFE 477
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 266 SWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
S S +S CQ+G+ + AR +FD +P+ WN +I G N PHEAL + M +A
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 326 S-VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK------ 378
+ T S L A A+ L G + R + S V +L++MY
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 379 CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGV 438
C E R +F+ M K +WN LI+ + GR EA F +M+R +P+ ++ + V
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 439 LSACN 443
A +
Sbjct: 221 FPAVS 225
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 238 bits (608), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 209/409 (51%), Gaps = 41/409 (10%)
Query: 206 TAVIVGYTRCGDMSEARKLF----DVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
+ + Y RC AR+L + P V N++I+ +K+G +A+ + D
Sbjct: 69 VSTVAAYRRCNRSYLARRLLLWFLSLSP--GVCNINLIIESLMKIGESGLAKKVLRNASD 126
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
+NVI TWN MIGG+ +N Q EALK + M
Sbjct: 127 QNVI-------------------------------TWNLMIGGYVRNVQYEEALKALKNM 155
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
L ++PN+ + S L A A LG L W+ ++ + +S+AL+D+YAKCG+
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGD 215
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
IG +R +F + + + WNA+I GFA +G A EA+ VF M E P+ IT +G+L+
Sbjct: 216 IGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTT 275
Query: 442 CNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGI 500
C+HCGL++EG+ F M F I P++EHYG MVDLLGRAG + EA LI++MP + + +
Sbjct: 276 CSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 501 ILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMK 560
I S L + +K+ E ++ + K +GDYVLL N+Y++ K+W + V+ +M
Sbjct: 336 IWRSLLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMS 392
Query: 561 MRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
G K S +E G F AGD H + I L L + K +
Sbjct: 393 KEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQ 441
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 16/242 (6%)
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF-------DVMP 229
+++ +K G G A+KV S+++ ++W +I GY R EA K D+ P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARL 285
+ +F + +LG + A+ + M D N I +++V Y + GD+ ++R
Sbjct: 164 NK--FSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
+F + ++ WNAMI G + EA+++F EM + V P+ +T L +L + G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM-EAEHVSPDSITFLGLLTTCSHCG 280
Query: 346 ALDLGGWIQGF-ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNAL 403
L+ G G +RR + + A++D+ + G + A L E MP E + W +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 404 IN 405
++
Sbjct: 341 LS 342
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 18/242 (7%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A++ ++ N MI + Q+ E +++ ++ T KP +F
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM--------LSFTDIKPNKFSF 168
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+ + C VH + + +G L+ +++ALVD+Y K G +G++R+VF +
Sbjct: 169 ASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR 228
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL----GCMDMAQDL 255
W A+I G+ G +EA ++F M V+ ++ G + G ++ ++
Sbjct: 229 NDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEY 288
Query: 256 FDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGGHCKNK 309
F M + I + +MV + G V+ A + + MP E ++ W +++ K
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYK 348
Query: 310 QP 311
P
Sbjct: 349 NP 350
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 236/469 (50%), Gaps = 23/469 (4%)
Query: 158 VHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
+H + +K GF D + LV YVK + +ARK+FDEM E + VSWT+VI GY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 218 MSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK----------MRDKNVISW 267
A +F M E N V C +A+ K +R +N++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR-RNIVVS 169
Query: 268 TSMVSGYCQNGDVESARLMFDLM--PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS- 324
+S+V Y + DVE+AR +FD M +N+ +W +MI + +N + HEA++LFR +
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAAL 229
Query: 325 ASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGR 384
S N+ L SV+ A + LG L G G R + + V+T+L+DMYAKCG +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 385 ARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
A +F + S+ ++I A +G + A+++F+ M+ PN +T++GVL AC+H
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 445 CGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA-NGIIL 502
GLV+EG M E +G+ P HY C+VD+LGR G +DEA L +T+ A G +L
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 503 SSFLFACGHFKD----VSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHM 558
L + G VS A + L ++ ++ Y+ L N YA W D E ++
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRL---IQSNQQVTSAYIALSNAYAVSGGWEDSESLRLE 466
Query: 559 MKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
MK G+ KE ACS IE F AGD I+ L L K MK
Sbjct: 467 MKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMK 515
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 44/376 (11%)
Query: 91 DEFLCNSMITTHFAIRQFSEPFTLFRDLCR----------------GTATRTMTM----- 129
D F N ++ ++ +++ + LF ++C G ++M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 130 --TPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVL 187
P P +TF ++ K C+A +R G +H +G ++ V+++LVDMY K +
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 188 GSARKVFDEM--SERSRVSWTAVIVGYTRCGDMSEARKL---FDVMPERDVAAFNVMIDG 242
+AR+VFD M R+ VSWT++I Y + EA +L F+ D A N +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRA--NQFMLA 240
Query: 243 YVKLGCMDMAQDLFDKM---------RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK 293
V C + + + K+ + N + TS++ Y + G + A +F +
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH 300
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GW 352
++ ++ +MI K+ A+KLF EM+ + + PN VTLL VL A + G ++ G +
Sbjct: 301 SVISYTSMIMAKAKHGLGEAAVKLFDEMV-AGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 353 IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLL---FEEMPEKETASWNALINGFAV 409
+ A + + R T ++DM + G + A L E E+ W AL++ +
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 410 NGRAKEALEVFEMMIR 425
+GR + E + +I+
Sbjct: 420 HGRVEIVSEASKRLIQ 435
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 6 PPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAV 65
PP +++ + C L + + K I L+I L + I +S+
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISG-------------LRRNIVVSSSLVD 174
Query: 66 STSRRNEAVSIVRHARRFFDAT--HKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
+ N+ V ARR FD+ + R+ SMIT + + E LFR
Sbjct: 175 MYGKCND----VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF----- 225
Query: 124 TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK 183
+T + +++ C++ + G HG+ + G+ + VAT+L+DMY K
Sbjct: 226 --NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAK 283
Query: 184 FGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
G L A K+F + S +S+T++I+ + G A KLFD M
Sbjct: 284 CGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 238/484 (49%), Gaps = 19/484 (3%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TFT+ + C +G +HG+ V +G + + ALV MY K G + +R+V +M
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 423
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
R V+W A+I GY D +A F M V++ N + V C+ + DL +
Sbjct: 424 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACL-LPGDLLE 481
Query: 258 KMR-------------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
+ + D++V + S+++ Y + GD+ S++ +F+ + +N+ TWNAM+
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ + E LKL +M S V ++ + L A A L L+ G + G A + +
Sbjct: 540 NAHHGHGEEVLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
+ A DMY+KCGEIG + + SWN LI+ +G +E F M+
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCL 483
G +P +T + +L+AC+H GLVD+G + + FG+ P IEH C++DLLGR+G L
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
EAE I MP N ++ S L +C ++ R + K+E E YVL N++
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 778
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
AT RW DVE+V+ M + K+ ACS +++ + F GD H I L +
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 838
Query: 604 KHMK 607
K +K
Sbjct: 839 KLIK 842
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 202/461 (43%), Gaps = 87/461 (18%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V+ AR FD R+E N+M++ + + E FR +C KP
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD---------LGIKPSS 58
Query: 137 HTFTALVKGCTACMAT-REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
+LV C + REG++VHG K+G D+YV+TA++ +Y +G++ +RKVF+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP-------------------------- 229
EM +R+ VSWT+++VGY+ G+ E ++ M
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 230 -------------ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ 276
E +A N +I +G +D A +FD+M +++ ISW S+ + Y Q
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
NG +E + +F LM + F + + S +V TLLS
Sbjct: 239 NGHIEESFRIFSLM-------------------------RRFHDEVNSTTVS----TLLS 269
Query: 337 VLPAVADLGALDLGGW---IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
V LG +D W I G + D V V L+ MYA G A L+F++MP
Sbjct: 270 V------LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
K+ SWN+L+ F +GR+ +AL + MI G N +T L+AC ++GR
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383
Query: 454 CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+ G+ +V + G+ G + E+ ++ MP
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 142/359 (39%), Gaps = 80/359 (22%)
Query: 180 MYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM------PERDV 233
MY KFG + AR +FD M R+ VSW ++ G R G E + F M P V
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 234 AAF--------------NVMIDGYVK--------------------LGCMDMAQDLFDKM 259
A V + G+V G + ++ +F++M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 260 RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFR 319
D+NV+SWTS++ GY G +P E + +++
Sbjct: 121 PDRNVVSWTSLMVGYSDKG-------------------------------EPEEVIDIYK 149
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
M V NE ++ V+ + L LG I G + L+ + V +LI M
Sbjct: 150 GM-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSM 208
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G + A +F++M E++T SWN++ +A NG +E+ +F +M R N T+ +L
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 440 SACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGR----AGCLDEAENLIQTMP 494
S H GR + G + + C+ + L R AG EA + + MP
Sbjct: 269 SVLGHVDHQKWGR----GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
MY K G + AR LF+ MP + SWN +++G G E +E F M G +P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 435 MIGVLSACNHCG-LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ +++AC G + EG + + G+ + ++ L G G + + + + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 494 PFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAG 534
P D N + +S + + D E V+ M E G
Sbjct: 121 P-DRNVVSWTSLMVG---YSDKGEPEEVIDIYKGMRGEGVG 157
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/458 (31%), Positives = 237/458 (51%), Gaps = 15/458 (3%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M +P TF +++ C+ C A G +VHG+A+K G+ V+ A + MY F
Sbjct: 280 RKMLEASLRPTDLTFVSVMGSCS-CAAM--GHQVHGLAIKTGYEKYTLVSNATMTMYSSF 336
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRC----GDMSEARKLFDVMPERDVAAFNVMI 240
G+A KVF+ + E+ V+W +I Y + MS +++ + + D F ++
Sbjct: 337 EDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL 396
Query: 241 DGYVKLGCMDMAQDLFDK--MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTW 298
+ L ++M Q K + K IS +++S Y +NG +E A L+F+ KNL +W
Sbjct: 397 ATSLDLDVLEMVQACIIKFGLSSKIEIS-NALISAYSKNGQIEKADLLFERSLRKNLISW 455
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMS-ASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
NA+I G N P E L+ F +L S + P+ TL ++L +L LG +
Sbjct: 456 NAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
R + ALI+MY++CG I + +F +M EK+ SWN+LI+ ++ +G + A+
Sbjct: 516 LRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAV 575
Query: 418 EVFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQIEHYGCMVD 475
++ M EG P+ T VLSAC+H GLV+EG F +M F G+ ++H+ C+VD
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVD 635
Query: 476 LLGRAGCLDEAENLIQT--MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECA 533
LLGRAG LDEAE+L++ + + + AC D+ + V + ++ EK+
Sbjct: 636 LLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDP 695
Query: 534 GDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
YV L N+YA W + E+ + + M G+ K+ CS
Sbjct: 696 SVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 186/404 (46%), Gaps = 51/404 (12%)
Query: 130 TPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
T +P ++ + + T G +VH A+++G +V+ L+ +Y + G L S
Sbjct: 51 TTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLAS 110
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-DVAAFNVMIDGYVKLGC 248
+K FDE+ E SWT ++ + GD+ A ++FD MPER DVA +N MI G + G
Sbjct: 111 LKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGY 170
Query: 249 MDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEKNLF-------- 296
+ + +LF +M V + +++S C G ++ + + L+ + F
Sbjct: 171 HETSVELFREMHKLGVRHDKFGFATILS-MCDYGSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 297 -----------------------------TWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
T+N +I G K+ E+L +FR+ML AS+
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKML-EASL 287
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
P ++T +SV+ + + +G + G A + + VS A + MY+ + G A
Sbjct: 288 RPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+FE + EK+ +WN +I+ + K A+ V++ M G +P+E T +L+ +
Sbjct: 345 VFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDV 404
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
++ + C FG++ +IE ++ + G +++A+ L +
Sbjct: 405 LEMVQACIIK---FGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 3/169 (1%)
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
L N + G ++ + ALKLF ++ ++ P++ ++ + L GG +
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
+A R L VS L+ +Y + G + + F+E+ E + SW L++ G +
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
A EVF+ M R + +++ C G + F+ M G+
Sbjct: 141 YAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/484 (30%), Positives = 238/484 (49%), Gaps = 19/484 (3%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TFT+ + C +G +HG+ V +G + + ALV MY K G + +R+V +M
Sbjct: 347 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM 406
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
R V+W A+I GY D +A F M V++ N + V C+ + DL +
Sbjct: 407 PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACL-LPGDLLE 464
Query: 258 KMR-------------DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
+ + D++V + S+++ Y + GD+ S++ +F+ + +N+ TWNAM+
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ + E LKL +M S V ++ + L A A L L+ G + G A + +
Sbjct: 523 NAHHGHGEEVLKLVSKM-RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
+ A DMY+KCGEIG + + SWN LI+ +G +E F M+
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCL 483
G +P +T + +L+AC+H GLVD+G + + FG+ P IEH C++DLLGR+G L
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
EAE I MP N ++ S L +C ++ R + K+E E YVL N++
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 761
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
AT RW DVE+V+ M + K+ ACS +++ + F GD H I L +
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 821
Query: 604 KHMK 607
K +K
Sbjct: 822 KLIK 825
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 196/448 (43%), Gaps = 87/448 (19%)
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
R+E N+M++ + + E FR +C KP +LV C
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCD---------LGIKPSSFVIASLVTACGRS 54
Query: 150 MAT-REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
+ REG++VHG K+G D+YV+TA++ +Y +G++ +RKVF+EM +R+ VSWT++
Sbjct: 55 GSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSL 114
Query: 209 IVGYTRCGDMSEARKLFDVMP--------------------------------------- 229
+VGY+ G+ E ++ M
Sbjct: 115 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 174
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDL 289
E +A N +I +G +D A +FD+M +++ ISW S+ + Y QNG +E + +F L
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
M + F + + S +V TLLSV LG +D
Sbjct: 235 M-------------------------RRFHDEVNSTTVS----TLLSV------LGHVDH 259
Query: 350 GGW---IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALING 406
W I G + D V V L+ MYA G A L+F++MP K+ SWN+L+
Sbjct: 260 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 319
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
F +GR+ +AL + MI G N +T L+AC ++GR + G+
Sbjct: 320 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 379
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+V + G+ G + E+ ++ MP
Sbjct: 380 QIIGNALVSMYGKIGEMSESRRVLLQMP 407
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 197/460 (42%), Gaps = 41/460 (8%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +A FD +RD NS+ + E F +F + R T
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST-------- 245
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T + L+ + G +HG+ VK GF + V L+ MY G A VF +
Sbjct: 246 -TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 304
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
M + +SW +++ + G +A L M + V + C D F
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA-AC--FTPDFF 361
Query: 257 DKMRD-----------KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
+K R N I ++VS Y + G++ +R + MP +++ WNA+IGG+
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 421
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG-ALDLGGWIQGFARRKKLDG 364
+++ P +AL F+ M + V N +T++SVL A G L+ G + + +
Sbjct: 422 AEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
V +LI MYAKCG++ ++ LF + + +WNA++ A +G +E L++ M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH----YGCMVDLLGRA 480
G ++ + LSA +++EG++ + G + EH + D+ +
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQ----LHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 481 GCLDEAENLIQTMPFDANGI-----ILSSFLFACGHFKDV 515
G + E +++ +P N IL S L G+F++V
Sbjct: 597 GEIGE---VVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 2/205 (0%)
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL-D 348
MP +N +WN M+ G + E ++ FR+M ++P+ + S++ A G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
G + GF + L V VSTA++ +Y G + +R +FEEMP++ SW +L+ G++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
G +E +++++ M EG NE +M V+S+C GR+ + G+ ++
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTM 493
++ +LG G +D A + M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQM 204
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 194/341 (56%), Gaps = 2/341 (0%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
+S+V Y +G+VE+A +F+ MPE+N+ +W AMI G + + LKL+ +M S S
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS- 217
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
+PN+ T ++L A GAL G + L + +S +LI MY KCG++ A
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI-REGFRPNEITMIGVLSACNHCG 446
+F++ K+ SWN++I G+A +G A +A+E+FE+M+ + G +P+ IT +GVLS+C H G
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL 506
LV EGR+ F M G+ P++ HY C+VDLLGR G L EA LI+ MP N +I S L
Sbjct: 338 LVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 507 FACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYK 566
F+C DV R E + +E +CA +V L NLYA+ W + V+ +MK +G
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 567 EVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
CS IE++ F A D + + I L L HM+
Sbjct: 458 NPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHME 498
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 139/284 (48%), Gaps = 9/284 (3%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+ ++ V+ C R G H +A+K GF D+Y+ ++LV +Y G + +A KVF+E
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMA 252
M ER+ VSWTA+I G+ + + KL+ M + + F ++ G +
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 253 QDLFDKMRDKNVISW----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ + + + S+ S++S YC+ GD++ A +FD K++ +WN+MI G+ ++
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+A++LF M+ + +P+ +T L VL + G + G L +
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNG 411
+ L+D+ + G + A L E MP K + W +L+ V+G
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 43/266 (16%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +A + F+ +R+ +MI+ F++ + + D+C ++ M + P
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISG------FAQEWRV--DICLKLYSK-MRKSTSDPND 221
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+TFTAL+ CT A +G VH + G L+++ +L+ MY K G L A ++FD+
Sbjct: 222 YTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQ 281
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
S + VSW ++I GY + G +A +LF++M +
Sbjct: 282 FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT---------------------- 319
Query: 257 DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFT----WNAMIGGHCKNKQPH 312
+ I++ ++S G V+ R F+LM E L ++ ++ +
Sbjct: 320 ----KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ 375
Query: 313 EALKLFREMLMSASVEPNEVTLLSVL 338
EAL+L M M +PN V S+L
Sbjct: 376 EALELIENMPM----KPNSVIWGSLL 397
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
V + ++L+ +Y GE+ A +FEEMPE+ SW A+I+GFA R L+++ M +
Sbjct: 155 VYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRK 214
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDE 485
PN+ T +LSAC G + +GR G+ + ++ + + G L +
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 486 A 486
A
Sbjct: 275 A 275
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/571 (28%), Positives = 272/571 (47%), Gaps = 84/571 (14%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC-RGTATRTMTMTPFKP 134
IV + R F++ + +E ++I + E +FR +C +G ++ ++
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL- 247
Query: 135 GGHTFTALVKGC---TACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+ +A +GC + G ++H +A++ GF DL++ +L+++Y K + A
Sbjct: 248 ---SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAE 304
Query: 192 KVFDEMSERSRVSWTAVIVGYT-----------------------------------RCG 216
+F EM E + VSW +IVG+ R G
Sbjct: 305 LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 217 DMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV------------ 264
D+ R++F +P+ V+A+N M+ GY + A F +M+ +N+
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 265 ----------------------ISWTS-MVSG----YCQNGDVESARLMFD-LMPEKNLF 296
IS S +VSG Y + +E + +FD + E ++
Sbjct: 425 SCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIA 484
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
WN+MI G N +AL LFR M +A + PNE + +VL + + L +L G G
Sbjct: 485 CWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
+ V TAL DMY KCGEI AR F+ + K T WN +I+G+ NGR EA
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQIEHYGCMVD 475
+ ++ MI G +P+ IT + VL+AC+H GLV+ G +M+ GI P+++HY C+VD
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 476 LLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGD 535
LGRAG L++AE L + P+ ++ ++ L +C DVS A RV + ++++ + +
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 536 YVLLRNLYATEKRWTDVEDVKHMMKMRGSYK 566
YVLL N Y++ ++W D ++ +M +K
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHK 755
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 211/450 (46%), Gaps = 58/450 (12%)
Query: 133 KPGGHTFTALVKGCTACMATR-EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+ GG+ + A + C + G +HG V+ G D Y+ L+D+Y++ G AR
Sbjct: 2 RSGGNKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR 61
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
KVFDEMS R SW A + + GD+ EA ++FD MPERDV ++N MI V+ G +
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 252 AQDLFDKM---------------------------------------RDKNVISWTSMVS 272
A ++ +M DKN+ +++S
Sbjct: 122 ALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 273 GYCQNG-DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNE 331
Y + G V+ +F+ + + N ++ A+IGG + + EA+++FR ++ V+ +
Sbjct: 182 MYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-LMCEKGVQVDS 240
Query: 332 VTLLSVLP---------AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
V L ++L +++++ +LG I A R G + ++ +L+++YAK ++
Sbjct: 241 VCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDM 300
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
A L+F EMPE SWN +I GF R+ +++E M GF+PNE+T I VL AC
Sbjct: 301 NGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC 360
Query: 443 NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFD---ANG 499
G V+ GRR F ++ P + + M+ +EA + + M F +
Sbjct: 361 FRSGDVETGRRIFSSIP----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDK 416
Query: 500 IILSSFLFACGHFKDVSRAERVLRETVKME 529
LS L +C + + +++ ++ E
Sbjct: 417 TTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/541 (23%), Positives = 228/541 (42%), Gaps = 110/541 (20%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-----RDLC-----------RG- 121
+AR+ FD RD + N+ +T + E +F RD+ +G
Sbjct: 59 YARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGF 118
Query: 122 -----TATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
+ M F P T +++ C+ + G+ HGVAVK G +++V A
Sbjct: 119 EEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNA 178
Query: 177 LVDMYVKFG-VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER---- 231
L+ MY K G ++ +VF+ +S+ + VS+TAVI G R + EA ++F +M E+
Sbjct: 179 LLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQV 238
Query: 232 --------------------------------------------DVAAFNVMIDGYVKLG 247
D+ N +++ Y K
Sbjct: 239 DSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNK 298
Query: 248 CMDMAQDLFDKMRDKNVISWTSMVSGYCQ------------------------------- 276
M+ A+ +F +M + NV+SW M+ G+ Q
Sbjct: 299 DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG 358
Query: 277 ----NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
+GDVE+ R +F +P+ ++ WNAM+ G+ + EA+ FR+M +++P++
Sbjct: 359 ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ-NLKPDKT 417
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE- 391
TL +L + A L L+ G I G R ++ + + + LI +Y++C ++ + +F++
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDC 477
Query: 392 MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR-PNEITMIGVLSACNHCGLVDE 450
+ E + A WN++I+GF N +AL +F M + PNE + VLS+C+ +
Sbjct: 478 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 537
Query: 451 GRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG 510
GR+ + G + D+ + G +D A + N +I + + G
Sbjct: 538 GRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNEMIHGYG 596
Query: 511 H 511
H
Sbjct: 597 H 597
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 162/380 (42%), Gaps = 26/380 (6%)
Query: 58 TTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRD 117
TC S+ + R + V RR F + + N+M++ + + E + FR
Sbjct: 351 VTCISVLGACFRSGD----VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 118 LCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATAL 177
M KP T + ++ C G ++HGV ++ + ++ + L
Sbjct: 407 ---------MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 178 VDMYVKFGVLGSARKVFDE-MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAF 236
+ +Y + + + +FD+ ++E W ++I G+ ++A LF M + V
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISW---------TSMVSGYCQNGDVESARLMF 287
N V C + L + V+ T++ YC+ G+++SAR F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
D + KN WN MI G+ N + EA+ L+R+M+ S +P+ +T +SVL A + G +
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLV 636
Query: 348 DLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALIN 405
+ G I R ++ + ++D + G + A L E P K ++ W L++
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Query: 406 GFAVNGRAKEALEVFEMMIR 425
V+G A V E ++R
Sbjct: 697 SCRVHGDVSLARRVAEKLMR 716
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 30/225 (13%)
Query: 7 PQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFI---TTCASI 63
P +T S C L + K QIH ++R + N ++++ I + C +
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGK------QIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 64 AVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTA 123
+S E + F D ++ D NSMI+ ++ LFR
Sbjct: 468 EIS-----ECI--------FDDCINELDIACWNSMISGFRHNMLDTKALILFR------- 507
Query: 124 TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK 183
R P +F ++ C+ + G + HG+ VK+G+ D +V TAL DMY K
Sbjct: 508 -RMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCK 566
Query: 184 FGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
G + SAR+ FD + ++ V W +I GY G EA L+ M
Sbjct: 567 CGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKM 611
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 244/516 (47%), Gaps = 73/516 (14%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F P + F + +K C++ + G ++HG+ +K+ + +L DMY
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY---------- 315
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
RCG ++ AR++FD + D A++NV+I G G D
Sbjct: 316 ---------------------ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 252 AQDLFDKMRDKN------------------------------VISW---------TSMVS 272
A +F +MR +I W S+++
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLT 414
Query: 273 GYCQNGDVESARLMF-DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNE 331
Y D+ +F D + +WN ++ +++QP E L+LF+ ML+S EP+
Sbjct: 415 MYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVS-ECEPDH 473
Query: 332 VTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE 391
+T+ ++L ++ +L LG + ++ + L + LIDMYAKCG +G+AR +F+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS 533
Query: 392 MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEG 451
M ++ SW+ LI G+A +G +EAL +F+ M G PN +T +GVL+AC+H GLV+EG
Sbjct: 534 MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEG 593
Query: 452 RRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACG 510
+ + M+ GI+P EH C+VDLL RAG L+EAE I M + + ++ + L AC
Sbjct: 594 LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACK 653
Query: 511 HFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVAC 570
+V A++ +K++ + +VLL +++A+ W + ++ MK K
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQ 713
Query: 571 SVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHM 606
S IE++ + F A D H + I L +W M
Sbjct: 714 SWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 205/421 (48%), Gaps = 10/421 (2%)
Query: 130 TPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
+ FK T+ +L+ C++ + +G ++H + + D + ++ MY K G L
Sbjct: 61 SSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRD 120
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVK 245
AR+VFD M ER+ VS+T+VI GY++ G +EA +L+ M + D+ AF +I
Sbjct: 121 AREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS 180
Query: 246 LGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
+ + + L ++ ++I+ ++++ Y + + A +F +P K+L +W+++
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
I G + EAL +EML PNE S L A + L D G I G + +
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
L G+ +L DMYA+CG + AR +F+++ +TASWN +I G A NG A EA+ VF
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAG 481
M GF P+ I++ +L A + +G + + +G + ++ +
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 482 CLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRN 541
L NL + +A+ + ++ L AC + R+ + + + EC D++ + N
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFK--LMLVSECEPDHITMGN 478
Query: 542 L 542
L
Sbjct: 479 L 479
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 155/392 (39%), Gaps = 91/392 (23%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
ARR FD + D N +I E ++F M + F P +
Sbjct: 324 ARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQ---------MRSSGFIPDAISL 374
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+L+ T MA +G+++H +K GF DL V +L+ MY L +F++
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 200 RS-RVSWTAVIVGYTRCGDMSEARKLFDVM------------------------------ 228
+ VSW ++ + E +LF +M
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ 494
Query: 229 -----------PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN 277
PE+ + N +ID Y K G + A+ +FD M +++V+SW++++ GY Q+
Sbjct: 495 VHCYSLKTGLAPEQFIK--NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQS 552
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
G E EAL LF+EM SA +EPN VT + V
Sbjct: 553 GFGE-------------------------------EALILFKEM-KSAGIEPNHVTFVGV 580
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDG---SVRVSTALIDMYAKCGEIGRARLLFEEMP- 393
L A + +G ++ G ++ +A + G + + ++D+ A+ G + A +EM
Sbjct: 581 LTACSHVGLVEEG--LKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKL 638
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIR 425
E + W L++ G A + E +++
Sbjct: 639 EPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%)
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N I CK+ EAL+ F ++S + T +S++ A + +L G I
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALE 418
++ ++ MY KCG + AR +F+ MPE+ S+ ++I G++ NG+ EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 419 VFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
++ M++E P++ ++ AC V G++
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 261/545 (47%), Gaps = 53/545 (9%)
Query: 74 VSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFK 133
V ++ +A FD ++D N +I+ + ++Q ++ +C+ M + K
Sbjct: 322 VGLIEYAEMVFDRMFEKDVVTWNLIISGY--VQQGLVEDAIY--MCQ-----LMRLEKLK 372
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
T L+ + G EV +++ F D+ +A+ ++DMY K
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK---------- 422
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
CG + +A+K+FD E+D+ +N ++ Y + G A
Sbjct: 423 ---------------------CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 254 DLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGH 305
LF M+ NVI+W ++ +NG V+ A+ MF M NL +W M+ G
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGM 521
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+N EA+ R+M + + PN ++ L A A L +L +G I G+ R S
Sbjct: 522 VQNGCSEEAILFLRKM-QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 366 -VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
V + T+L+DMYAKCG+I +A +F E NA+I+ +A+ G KEA+ ++ +
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLE 640
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCFK-AMEGFGIAPQIEHYGCMVDLLGRAGCL 483
G +P+ IT+ VLSACNH G +++ F + + P +EHYG MVDLL AG
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGET 700
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
++A LI+ MPF + ++ S + +C + + + R+ ++ E E +G+YV + N Y
Sbjct: 701 EKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAY 760
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGR--FREFVAGDYLHSNLEVIQLTLGQ 601
A E W +V ++ MMK +G K+ CS I++ G FVA D H+ + IQ+ L
Sbjct: 761 AVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLAL 820
Query: 602 LWKHM 606
L M
Sbjct: 821 LLYDM 825
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 250/507 (49%), Gaps = 37/507 (7%)
Query: 21 DLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH 79
++LQ C ++ ++T QIHA +L+N + ++I T I + + +A+ I
Sbjct: 75 EILQGCVYERDLSTGKQIHARILKNG---DFYARNEYIETKLVIFYA---KCDALEI--- 125
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTM--TPFKPGGH 137
A F R+ F ++I I LC G + M P
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRI-----------GLCEGALMGFVEMLENEIFPDNF 174
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
+ K C A +R G VHG VK+G ++VA++L DMY K GVL A KVFDE+
Sbjct: 175 VVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEI 234
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMID---------GYVKLGC 248
+R+ V+W A++VGY + G EA +LF M ++ V V + G V+ G
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 249 MDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
A + + M N++ TS+++ YC+ G +E A ++FD M EK++ TWN +I G+ +
Sbjct: 295 QSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+A+ + + M + ++ + VTL +++ A A L LG +Q + R + + +
Sbjct: 354 GLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
++ ++DMYAKCG I A+ +F+ EK+ WN L+ +A +G + EAL +F M EG
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
PN IT ++ + G VDE + F M+ GI P + + M++ + + GC +EA
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 489 LIQTMP---FDANGIILSSFLFACGHF 512
++ M N ++ L AC H
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHL 559
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 230/427 (53%), Gaps = 44/427 (10%)
Query: 191 RKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMD 250
R++ S ++T+VI C D+S R V V+ F +D YV+
Sbjct: 96 RRMLSSNVSPSNYTFTSVI---KSCADLSALRIGKGVHCHAVVSGFG--LDTYVQ----- 145
Query: 251 MAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
++V+ Y + GD+E AR +FD MPEK++ WN+++ G +N
Sbjct: 146 -----------------AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
EA+++F +M S EP+ T +S+L A A GA+ LG W+ + + LD +V++ T
Sbjct: 189 ADEAIQVFYQMRESG-FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGT 247
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE-GFR 429
ALI++Y++CG++G+AR +F++M E A+W A+I+ + +G ++A+E+F M + G
Sbjct: 248 ALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPI 307
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
PN +T + VLSAC H GLV+EGR +K M + + + P +EH+ CMVD+LGRAG LDEA
Sbjct: 308 PNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYK 367
Query: 489 LIQTMPFDANG-----IILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
I + DA G + ++ L AC ++ + + + +E + G +V+L N+Y
Sbjct: 368 FIHQL--DATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
A + +V ++ M K+V SVIEV+ + F GD H G+++
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQE-------TGEIY 478
Query: 604 KHMKVEI 610
++++ I
Sbjct: 479 RYLETLI 485
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 199/435 (45%), Gaps = 38/435 (8%)
Query: 31 ITTLLQIHAFMLRNSVDNNLNLLAKFIT-TCASIAVSTSRRNEAVSIVRHARRFFDATHK 89
+ L Q+HA ++ + +LL K IT C++ A++ + F +
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIA------------YTHLLFLSVPL 69
Query: 90 RDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTAC 149
D+FL NS+I + +R +R M + P +TFT+++K C
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYR---------RMLSSNVSPSNYTFTSVIKSCADL 120
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
A R G VH AV +GF LD YV ALV Y K G + AR+VFD M E+S V+W +++
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 210 VGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMA----QDLFDKMRD 261
G+ + G EA ++F M E D A F ++ + G + + Q + + D
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
NV T++++ Y + GDV AR +FD M E N+ W AMI + + +A++LF +M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCG 380
PN VT ++VL A A G ++ G + + + +L V ++DM + G
Sbjct: 301 EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAG 360
Query: 381 EIGRARLLFEEMPEKETAS----WNALINGFAVNGRAKEALEVFEMMIR-EGFRPNEITM 435
+ A ++ A+ W A++ ++ +E+ + +I E P M
Sbjct: 361 FLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVM 420
Query: 436 IGVLSACNHCGLVDE 450
+ + A + G DE
Sbjct: 421 LSNIYALS--GKTDE 433
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
T +++ C + L+F +P + F +N++I K + P + +R ML S++V
Sbjct: 45 TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRML-SSNV 103
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
P+ T SV+ + ADL AL +G + A V AL+ Y+KCG++ AR
Sbjct: 104 SPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQ 163
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+F+ MPEK +WN+L++GF NG A EA++VF M GF P+ T + +LSAC G
Sbjct: 164 VFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGA 223
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLF 507
V G + + G+ ++ +++L R G + +A + M + N ++ +
Sbjct: 224 VSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMIS 282
Query: 508 ACGHFKDVSRAERVLRETVKMEKECA 533
A G +A + KME +C
Sbjct: 283 AYGTHGYGQQAVELFN---KMEDDCG 305
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 262/536 (48%), Gaps = 56/536 (10%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
VR A R F +R+ +MI+ + E LF ++ + + P G
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK-------DVDAVSPNG 299
Query: 137 HTFTALVKGCTACMAT--REGLEVHGVAVKNGFCL---DLYVATALVDMYVKFGVLGSAR 191
T +L C R G ++H + NG+ D +A +LV MY G++ SA+
Sbjct: 300 ETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQ 359
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
+ +E D+ + N++I+ Y+K G ++
Sbjct: 360 SLLNE---------------------------------SFDLQSCNIIINRYLKNGDLER 386
Query: 252 AQDLFDKMRD-KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ 310
A+ LF++++ + +SWTSM+ GY + GDV A +F + +K+ TW MI G +N+
Sbjct: 387 AETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNEL 446
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK--LDGSVRV 368
EA L +M+ ++P T +L + LD G I + D + +
Sbjct: 447 FAEAASLLSDMV-RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 505
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+L+ MYAKCG I A +F +M +K+T SWN++I G + +G A +AL +F+ M+ G
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
+PN +T +GVLSAC+H GL+ G FKAM E + I P I+HY M+DLLGRAG L EAE
Sbjct: 566 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 625
Query: 488 NLIQTMPFDANGIILSSFLFACG-HFKDVSR---AERVLRETVKMEKECAGDYVLLRNLY 543
I +PF + + + L CG +++D AER ++++ A +V L N+Y
Sbjct: 626 EFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVY 685
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTL 599
A R ++++ M ++G K CS + V+GR F++GD S E Q+ L
Sbjct: 686 AGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGD--KSASEAAQMVL 739
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 217/500 (43%), Gaps = 113/500 (22%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR F+ +R+ CN+M+T + R+ +E +TLFR++ + + T+ +T G +
Sbjct: 96 ARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSE 155
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
A+ ++FDEM E
Sbjct: 156 DAV-------------------------------------------------ELFDEMPE 166
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
R+ VSW ++ G R GDM +A+++FD MP RDV ++N MI GY++ M+ A+ LF M
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDM 226
Query: 260 RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFR 319
+KNV++WTSMV GYC+ GDV A +F MPE+N+ +W AMI G N+ EAL LF
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 320 EMLMSA-SVEPNEVTLLSVLPAVADLGA------------LDLGGWIQGFARRKKLDGSV 366
EM +V PN TL+S+ A LG + GW + +D
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGW-------ETVDHDG 339
Query: 367 RVSTALIDMYA-----------------------------KCGEIGRARLLFEEMPE-KE 396
R++ +L+ MYA K G++ RA LFE + +
Sbjct: 340 RLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHD 399
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
SW ++I+G+ G A +F+ + + +T ++S L E
Sbjct: 400 KVSWTSMIDGYLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLS 455
Query: 457 AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL-----IQTMPFDANGII---LSSFLFA 508
M G+ P Y ++ G LD+ +++ T +D + I+ L S
Sbjct: 456 DMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAK 515
Query: 509 CGHFKDVSR--AERVLRETV 526
CG +D A+ V ++TV
Sbjct: 516 CGAIEDAYEIFAKMVQKDTV 535
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 186/363 (51%), Gaps = 58/363 (15%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
T+L+ Y K G L AR +F+ M ER+ V+ A++ GY +C M+EA LF MP ++V
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
++ VM+ G + A +LFD+M ++NV+SW ++V+G +NGD+E A+ +FD MP ++
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+ +WNAMI G+ +N EA LF +M E N VT W
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDM-----SEKNVVT------------------W-- 234
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
T+++ Y + G++ A LF EMPE+ SW A+I+GFA N +
Sbjct: 235 ---------------TSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYR 279
Query: 415 EALEVFEMMIR--EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIA---PQIEH 469
EAL +F M + + PN T+I + AC GL E RR + + I+ ++H
Sbjct: 280 EALMLFLEMKKDVDAVSPNGETLISLAYACG--GLGVEFRRLGEQLHAQVISNGWETVDH 337
Query: 470 YG----CMVDLLGRAGCLDEAENLI-QTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
G +V + +G + A++L+ ++ + II++ +L D+ RAE L E
Sbjct: 338 DGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYL----KNGDLERAE-TLFE 392
Query: 525 TVK 527
VK
Sbjct: 393 RVK 395
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 172/600 (28%), Positives = 286/600 (47%), Gaps = 64/600 (10%)
Query: 36 QIHAFMLRNSVDNN----LNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRD 91
+IHA +L++S ++ N L T C + A R + D
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMP--------------QAERILRQMNNAD 350
Query: 92 EFLCNSMITTHFAIRQFSEPFTLFRDL-CRGTATRTMTMTPFKPGGHTFTALVKGCTACM 150
NS+I + + E F D+ G + ++MT + L+ G
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAG----- 405
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIV 210
+E+H +K+G+ +L V L+DMY K + + F M ++ +SWT VI
Sbjct: 406 -----MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 211 GYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV------------------KLGCMDMA 252
GY + EA +LF RDVA + ID + ++ C +
Sbjct: 461 GYAQNDCHVEALELF-----RDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 253 QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
+ L D + ++ V G C+N + A +F+ + K++ +W +MI N
Sbjct: 516 KGLLDTVIQNELVD----VYGKCRN--MGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK--LDGSVRVST 370
EA++LFR M+ + + + V LL +L A A L AL+ G I + RK L+GS+ V
Sbjct: 570 EAVELFRRMVETG-LSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV-- 626
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
A++DMYA CG++ A+ +F+ + K + ++IN + ++G K A+E+F+ M E P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+ I+ + +L AC+H GL+DEGR K ME + + P EHY C+VD+LGRA C+ EA
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
++ M + + + L AC + E + +++E + G+ VL+ N++A + RW
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 550 TDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMKVE 609
DVE V+ MK G K CS IE+DG+ +F A D H + I L ++ + ++ E
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 37/396 (9%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + FD R F N+MI + + + + L+ + M + G +F
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN---------MRVEGVPLGLSSF 185
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
AL+K C R G E+H + VK G+ ++ ALV MY K L +AR++FD E
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 200 R-SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMI-------DG--YVKLGCM 249
+ V W +++ Y+ G E +LF M A + I DG Y KLG
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
A L + ++++ Y + G + A + M ++ TWN++I G+ +N
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
EAL+ F +M+ +A + +EV++ S++ A L L G + + + D +++V
Sbjct: 366 MYKEALEFFSDMI-AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 370 TALIDMYAKCG---EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE 426
LIDMY+KC +GRA F M +K+ SW +I G+A N EALE+F + ++
Sbjct: 425 NTLIDMYSKCNLTCYMGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 427 GFRPNEITMIGVLSACN-----------HCGLVDEG 451
+E+ + +L A + HC ++ +G
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 14/316 (4%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKN--GFCLDLYVATALVDMYVKFGVLGSARKVFD 195
F +++ C A +G ++H K F LD ++A LV MY K G L A KVFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDM 251
EM +R+ +W +I Y G+ + A L+ M V ++F ++ KL +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 252 AQDLFDKMRDKNVISW----TSMVSGYCQNGDVESARLMFDLMPEK-NLFTWNAMIGGHC 306
+L + S ++VS Y +N D+ +AR +FD EK + WN+++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 307 KNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS- 365
+ + E L+LFREM M+ PN T++S L A LG I + S
Sbjct: 261 TSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+ V ALI MY +CG++ +A + +M + +WN+LI G+ N KEALE F MI
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 379
Query: 426 EGFRPNEITMIGVLSA 441
G + +E++M +++A
Sbjct: 380 AGHKSDEVSMTSIIAA 395
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 111/227 (48%), Gaps = 5/227 (2%)
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
+V Y + G ++ A +FD MP++ F WN MIG + N +P AL L+ M + V
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-VPL 180
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ ++L A A L + G + + + + AL+ MYAK ++ AR LF
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 390 EEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
+ EK A WN++++ ++ +G++ E LE+F M G PN T++ L+AC+
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGC--MVDLLGRAGCLDEAENLIQTM 493
G+ ++ E Y C ++ + R G + +AE +++ M
Sbjct: 301 KLGKEIHASVLKSSTHSS-ELYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 168/389 (43%), Gaps = 50/389 (12%)
Query: 35 LQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRD 91
+++HA+++++ D+NL N L + C ++ + R F H +D
Sbjct: 406 MELHAYVIKHGWDSNLQVGNTLIDMYSKC--------------NLTCYMGRAFLRMHDKD 451
Query: 92 EFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMA 151
++I + E LFRD+ A + M + G ++++ + +
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDV----AKKRMEIDEMILG-----SILRASSVLKS 502
Query: 152 TREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG 211
E+H ++ G LD + LVD+Y K +G A +VF+ + + VSWT++I
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMV 271
G+ SEA +LF M E ++A + V L C+ A + I +
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADS------VALLCILSAAASLSALNKGREIHCYLLR 615
Query: 272 SGYCQN--------------GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
G+C GD++SA+ +FD + K L + +MI + + A++L
Sbjct: 616 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 675
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMY 376
F +M +V P+ ++ L++L A + G LD G G+++ +L+ L+DM
Sbjct: 676 FDKM-RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 734
Query: 377 AKCGEIGRARLLFEEMPEKETAS-WNALI 404
+ + A + M + TA W AL+
Sbjct: 735 GRANCVVEAFEFVKMMKTEPTAEVWCALL 763
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/437 (32%), Positives = 239/437 (54%), Gaps = 19/437 (4%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
F +L++ C + A G+ VH + +L +++ LV +Y G A +VFD MS
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 199 ER--SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLGCMDMA 252
+R S +W ++I GY G +A L+ M E V F ++ +G + +
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 253 Q----DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ DL + +V ++V Y + GD+ AR +FD++P K+ +WN+M+ G+ +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
HEAL +FR M+ + +EP++V + SVL V + G + G+ R+ ++ + V
Sbjct: 275 GLLHEALDIFRLMVQNG-IEPDKVAISSVLARVL---SFKHGRQLHGWVIRRGMEWELSV 330
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ ALI +Y+K G++G+A +F++M E++T SWNA+I+ + N L+ FE M R
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYFEQMHRANA 387
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
+P+ IT + VLS C + G+V++G R F M + +GI P++EHY CMV+L GRAG ++EA
Sbjct: 388 KPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
Query: 488 NLI-QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATE 546
++I Q M +A + + L+AC + E + ++E + ++ LL +Y+
Sbjct: 448 SMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKA 507
Query: 547 KRWTDVEDVKHMMKMRG 563
KR DVE V+ MM RG
Sbjct: 508 KRAEDVERVRQMMVDRG 524
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 188/420 (44%), Gaps = 37/420 (8%)
Query: 4 ESPPQRTLWSTAERKCLDLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCAS 62
E+ Q+ + T LL+ C S + I +++H + + NNL + +K + AS
Sbjct: 80 ETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYAS 139
Query: 63 IAVSTSRRNEAVSIVRHARRFFDATHKRDE--FLCNSMITTHFAIRQFSEPFTLFRDLCR 120
+ A FD KRD F NS+I+ + + Q+ + L+
Sbjct: 140 CGYAEV-----------AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ--- 185
Query: 121 GTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDM 180
M KP TF ++K C + + G +H VK GF D+YV ALV M
Sbjct: 186 ------MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVM 239
Query: 181 YVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMI 240
Y K G + AR VFD + + VSW +++ GY G + EA +F +M + + V I
Sbjct: 240 YAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 241 DGYV-KLGCMDMAQDLFDKMRDKNVISW-----TSMVSGYCQNGDVESARLMFDLMPEKN 294
+ ++ + L + + + W +++ Y + G + A +FD M E++
Sbjct: 300 SSVLARVLSFKHGRQLHGWVIRRG-MEWELSVANALIVLYSKRGQLGQACFIFDQMLERD 358
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+WNA+I H KN LK F +M A+ +P+ +T +SVL A+ G ++ G +
Sbjct: 359 TVSWNAIISAHSKNSN---GLKYFEQM-HRANAKPDGITFVSVLSLCANTGMVEDGERLF 414
Query: 355 GF-ARRKKLDGSVRVSTALIDMYAKCGEIGRA-RLLFEEMP-EKETASWNALINGFAVNG 411
++ +D + ++++Y + G + A ++ +EM E W AL+ ++G
Sbjct: 415 SLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 249/544 (45%), Gaps = 87/544 (15%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR FD RD N+MI+ ++ ++ +F M
Sbjct: 168 VEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD---------WMVNESVDLDH 218
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T +++ C G VH + + + V ALV+MY+K
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK------------- 265
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL- 255
CG M EAR +FD M RDV + MI+GY + G ++ A +L
Sbjct: 266 ------------------CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 256 ----FDKMRDKNVISWTSMVS----------GYCQNGDVESARLMFDLMPEKNLFT---- 297
F+ +R N ++ S+VS G C +G ++ D++ E +L +
Sbjct: 308 RLMQFEGVR-PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAK 366
Query: 298 ---------------------WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
W+A+I G +N+ +AL LF+ M VEPN TL S
Sbjct: 367 CKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM-RREDVEPNIATLNS 425
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
+LPA A L L I + + S+ +T L+ +Y+KCG + A +F + EK
Sbjct: 426 LLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 397 TAS----WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGR 452
+ W ALI+G+ ++G AL+VF M+R G PNEIT L+AC+H GLV+EG
Sbjct: 486 KSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGL 545
Query: 453 RCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGH 511
F+ M E + + HY C+VDLLGRAG LDEA NLI T+PF+ + + L AC
Sbjct: 546 TLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVT 605
Query: 512 FKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
++V E + ++E E G+YVLL N+YA RW D+E V+ MM+ G K+ S
Sbjct: 606 HENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
Query: 572 VIEV 575
IE+
Sbjct: 666 TIEI 669
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 211/497 (42%), Gaps = 89/497 (17%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +AR+ F+ E +S+++ + IR + L+ D P G
Sbjct: 65 ITYARKLFE------EMPQSSLLSYNIVIRMYVRE-GLYHDAISVFIRMVSEGVKCVPDG 117
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+T+ + K + + GL VHG +++ F D YV AL+ MY+ FG + AR VFD
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----------------------- 233
M R +SW +I GY R G M++A +FD M V
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 234 ----------------AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQN 277
N +++ Y+K G MD A+ +FD+M ++VI+WT M++GY ++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 278 GDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
GDVE+ AL+L R M V PN VT+ S+
Sbjct: 298 GDVEN-------------------------------ALELCRLMQFEG-VRPNAVTIASL 325
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
+ D ++ G + G+A R+++ + + T+LI MYAKC + +F + T
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGR----R 453
W+A+I G N +AL +F+ M RE PN T+ +L A + L D +
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIH 443
Query: 454 CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE---NLIQTMPFDANGIILSSFLFACG 510
C+ GF ++ +V + + G L+ A N IQ + ++ + + G
Sbjct: 444 CYLTKTGF--MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 511 HFKDVSRAERVLRETVK 527
D A +V E V+
Sbjct: 502 MHGDGHNALQVFMEMVR 518
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 151/299 (50%), Gaps = 46/299 (15%)
Query: 210 VGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVI---- 265
V Y CG ++ ARKLF+ MP+ + ++N++I YV+ G A +F +M + V
Sbjct: 57 VTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPD 116
Query: 266 -----------------------------SW--------TSMVSGYCQNGDVESARLMFD 288
SW ++++ Y G VE AR +FD
Sbjct: 117 GYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
+M +++ +WN MI G+ +N ++AL +F + +++ SV+ + T++S+LP L L+
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMF-DWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
+G + K+L + V AL++MY KCG + AR +F+ M ++ +W +ING+
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQI 467
+G + ALE+ +M EG RPN +T+ ++S C V++G K + G+ + Q+
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG----KCLHGWAVRQQV 350
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 5/233 (2%)
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML 322
+++S S+ C G + AR +F+ MP+ +L ++N +I + + H+A+ +F M+
Sbjct: 50 HILSTLSVTYALC--GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMV 107
Query: 323 MSASVE--PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
S V+ P+ T V A +L ++ LG + G R V AL+ MY G
Sbjct: 108 -SEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFG 166
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
++ AR +F+ M ++ SWN +I+G+ NG +AL +F+ M+ E + T++ +L
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 441 ACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
C H ++ GR K +E + +IE +V++ + G +DEA + M
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/481 (29%), Positives = 241/481 (50%), Gaps = 42/481 (8%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V AR+ FD KRD C MI + E FR++ + + P
Sbjct: 67 VLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVP----- 121
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+L+K + G +H + +K + D ++ ++L+DMY KFG +G+ARKVF +
Sbjct: 122 ----SLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSD 177
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
+ E+ V + A+I GY EA L +D+ + D
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADEALNLV-----KDMKLLGIKPD--------------- 217
Query: 257 DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLM----PEKNLFTWNAMIGGHCKNKQPH 312
VI+W +++SG+ + E + +LM + ++ +W ++I G N Q
Sbjct: 218 -------VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNE 270
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
+A F++ML + + PN T++++LPA L + G I G++ L+ V +AL
Sbjct: 271 KAFDAFKQML-THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSAL 329
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNE 432
+DMY KCG I A +LF + P+K T ++N++I +A +G A +A+E+F+ M G + +
Sbjct: 330 LDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDH 389
Query: 433 ITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
+T +L+AC+H GL D G+ F M+ + I P++EHY CMVDLLGRAG L EA +I+
Sbjct: 390 LTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Query: 492 TMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTD 551
M + + + + L AC + ++ A + ++E E +G+ +LL +LYA W
Sbjct: 450 AMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWES 509
Query: 552 V 552
V
Sbjct: 510 V 510
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
+V+ Y + G V AR +FD MP++++ MIG +N E+L FREM ++
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG-LKL 115
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ + S+L A +L + G I + + + ++LIDMY+K GE+G AR +F
Sbjct: 116 DAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVF 175
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
++ E++ +NA+I+G+A N +A EAL + + M G +P+ IT ++S +H
Sbjct: 176 SDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE 426
R++ L+ Y +CG++ AR +F+EMP+++ + +I A NG +E+L+ F M ++
Sbjct: 52 RIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD 111
Query: 427 GFRPNEITMIGVLSA 441
G + + + +L A
Sbjct: 112 GLKLDAFIVPSLLKA 126
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/577 (27%), Positives = 267/577 (46%), Gaps = 67/577 (11%)
Query: 62 SIAVSTSRRNEAVSIVRH--------ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFT 113
S +V+ +N V I H AR F+ L MIT + + +
Sbjct: 28 SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 114 LFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYV 173
LF ++ R + ++ +++ GC C +++ + +
Sbjct: 88 LFDEM----PVRDVV---------SWNSMISGCVECGDMNTAVKLFDEMPER----SVVS 130
Query: 174 ATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDV 233
TA+V+ + G + A ++F +M + +W +++ GY + G + +A KLF MP ++V
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
Query: 234 AAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT------------------------- 268
++ MI G + A DLF M + S +
Sbjct: 191 ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
Query: 269 --------------SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEA 314
S+++ Y + +R +FD + + W A++ G+ NK+ +A
Sbjct: 251 IIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDA 310
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
L +F ML + S+ PN+ T S L + + LG LD G + G A + L+ V +L+
Sbjct: 311 LSIFSGMLRN-SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
MY+ G + A +F ++ +K SWN++I G A +GR K A +F MIR P+EIT
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEG--FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
G+LSAC+HCG +++GR+ F M I +I+HY CMVD+LGR G L EAE LI+
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
M N ++ + L AC DV R E+ ++ + + YVLL N+YA+ RW++V
Sbjct: 490 MVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNV 549
Query: 553 EDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
++ MK G K+ S + + G+ EF +GD H
Sbjct: 550 SKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH 586
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 172/601 (28%), Positives = 278/601 (46%), Gaps = 107/601 (17%)
Query: 21 DLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHA 80
DL C+ ++ +IH +M++ +D + AVS +V +R+A
Sbjct: 34 DLRSCRDTVEVS---RIHGYMVKTGLDKD------------DFAVSKLLAFSSVLDIRYA 78
Query: 81 RRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFT 140
F+ + F+ N+MI + + F++F L + +T+ F +F
Sbjct: 79 SSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQL----RAKGLTLDRF-----SFI 129
Query: 141 ALVKGCT--ACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+K C+ C++ EGL HG+A+++GF VF ++
Sbjct: 130 TTLKSCSRELCVSIGEGL--HGIALRSGF------------------------MVFTDLR 163
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-DVAAFNVMIDGYVKLGCMDMAQDLFD 257
A+I Y CG +S+ARK+FD MP+ D F+ +++GY+++ +A DLF
Sbjct: 164 -------NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR 216
Query: 258 KMRDKNVIS---------------------------------------WTSMVSGYCQNG 278
MR V+ T+++ Y + G
Sbjct: 217 IMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTG 276
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
+ SAR +FD K++ TWN MI + K E + L R+M ++PN T + +L
Sbjct: 277 GISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFVGLL 335
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA 398
+ A A +G + +++ + TAL+DMYAK G + +A +F M +K+
Sbjct: 336 SSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVK 395
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREG--FRPNEITMIGVLSACNHCGLVDEGRRCFK 456
SW A+I+G+ +G A+EA+ +F M E RPNEIT + VL+AC+H GLV EG RCFK
Sbjct: 396 SWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFK 455
Query: 457 AM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDV 515
M E + P++EHYGC+VDLLGRAG L+EA LI+ +P ++ + L AC + +
Sbjct: 456 RMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNA 515
Query: 516 SRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEV 575
E V+ +M + D +LL +A D + K R KE S IE+
Sbjct: 516 DLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD-NELNKGR---KEAGYSAIEI 571
Query: 576 D 576
+
Sbjct: 572 E 572
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 174/628 (27%), Positives = 277/628 (44%), Gaps = 106/628 (16%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFR-DLC-RGTATRTMTMTPF- 132
++R AR FD +R+ + N++I + E LF D C R T ++ F
Sbjct: 38 LLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFA 97
Query: 133 KPGG------------------------HTFTALVKGCTACMATREGLEVHGVAVKNGFC 168
K G T T +VK G ++HGV VK G
Sbjct: 98 KTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGND 157
Query: 169 LDLYVATALVDMYVKFGVL--------GSARKVFDEMSERS------------------- 201
+ ++L+ MY K G GS + D ++ +
Sbjct: 158 GTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFW 217
Query: 202 -------RVSWTAVIVGYTRCGDMSEARKLFDVMPERDV--------AAFNVM------- 239
+SW +I GY + G EA K+ M E + A NV+
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK 277
Query: 240 ------------------------IDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYC 275
+D Y K G M A+ N+ S +SM+ GY
Sbjct: 278 IGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYS 337
Query: 276 QNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLL 335
G + A+ +FD + EKNL W AM G+ +QP L+L R + + + P+ + ++
Sbjct: 338 SQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMV 397
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
SVL A + ++ G I G + R + ++ TA +DMY+KCG + A +F+ E+
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
+T +NA+I G A +G ++ + FE M GF+P+EIT + +LSAC H GLV EG + F
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 456 KAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM-PFDANGIILSSFLFACGHFK 513
K+M E + I+P+ HY CM+DL G+A LD+A L++ + + + +IL +FL AC K
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNK 577
Query: 514 DVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEV--ACS 571
+ + V + + +E Y+ + N YA+ RW +++ ++H +MRG E+ CS
Sbjct: 578 NTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRH--QMRGKELEIFSGCS 635
Query: 572 VIEVDGRFREFVAGDYLHSNLEVIQLTL 599
+D +F F + D H E I L
Sbjct: 636 WANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 30/291 (10%)
Query: 153 REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGY 212
++G H ++K+G L + LV++Y K G+L AR VFDEM ER+ SW AVI Y
Sbjct: 5 KDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAY 64
Query: 213 TRCGDMSEARKLFDVMP-ERDVAAFNVMIDGYVKL-GCMDMAQDLFDKMRDKNVISWTSM 270
+ ++ EAR+LF+ ERD+ +N ++ G+ K GC A ++F +M K
Sbjct: 65 VKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRK-------- 116
Query: 271 VSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
E + D + +A + +Q H +L+ +
Sbjct: 117 ----------EKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH-------GVLVKTGNDGT 159
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
+ + S++ + G I + + +D R A+I Y + G+I +A +F
Sbjct: 160 KFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVAR--NAMIAAYCREGDIDKALSVFW 217
Query: 391 EMPE-KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLS 440
PE +T SWN LI G+A NG +EAL++ M G + +E + VL+
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN 268
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 57 ITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFR 116
+ + +S+ V S + + V A+R FD+ +++ + +M + +RQ L R
Sbjct: 326 LYSASSMIVGYSSQGKMVE----AKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELAR 381
Query: 117 DLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
A T T P +++ C+ G E+HG +++ G +D + TA
Sbjct: 382 AF---IANETNT-----PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTA 433
Query: 177 LVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE 230
VDMY K G + A ++FD ER V + A+I G G +++ + F+ M E
Sbjct: 434 FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 228/429 (53%), Gaps = 9/429 (2%)
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
A +F + + + +I GY EA ++ M +R D + ++ +
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 246 LGCMDMAQDL----FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
L + + + F + +V S+++ Y + G++E + +F+ + K +W++M
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
+ E L LFR M +++ E ++S L A A+ GAL+LG I GF R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
+ ++ V T+L+DMY KCG + +A +F++M ++ +++A+I+G A++G + AL +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG-IAPQIEHYGCMVDLLGRA 480
MI+EG P+ + + VL+AC+H GLV EGRR F M G + P EHYGC+VDLLGRA
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 481 GCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLR 540
G L+EA IQ++P + N +I +FL C +++ + +E +K+ GDY+L+
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 541 NLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLG 600
NLY+ + W DV + + ++G + S++E+ G+ FV+ D H + I L
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLH 504
Query: 601 QLWKHMKVE 609
Q+ +K E
Sbjct: 505 QMEWQLKFE 513
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 192/436 (44%), Gaps = 44/436 (10%)
Query: 7 PQRTLWSTAERKCLDLLQCKSKKTITTLLQIHA-FMLRNSVDNNLNLLAKFITTCASIAV 65
P+ + E++CL LL K I Q+HA F+ + ++ + + CA
Sbjct: 21 PEVNNFGGKEQECLYLL--KRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGW 78
Query: 66 STSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC-RGTAT 124
S + +A F F N+MI + + F E + ++ RG
Sbjct: 79 ENS--------MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGN-- 128
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+P T+ L+K CT + REG ++HG K G D++V +L++MY +
Sbjct: 129 --------EPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC 180
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM-PERDVAA-------- 235
G + + VF+++ ++ SW++++ G SE LF M E ++ A
Sbjct: 181 GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSA 240
Query: 236 -FNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
G + LG M + L + + N+I TS+V Y + G ++ A +F M ++N
Sbjct: 241 LLACANTGALNLG-MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRN 299
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
T++AMI G + + AL++F +M+ +EP+ V +SVL A + G + G +
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMI-KEGLEPDHVVYVSVLNACSHSGLVKEGRRV- 357
Query: 355 GFA---RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVN 410
FA + K++ + L+D+ + G + A + +P EK W F
Sbjct: 358 -FAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRT----FLSQ 412
Query: 411 GRAKEALEVFEMMIRE 426
R ++ +E+ ++ +E
Sbjct: 413 CRVRQNIELGQIAAQE 428
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 263/537 (48%), Gaps = 28/537 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V A+ FD +RD N+MI+ + ++ SE L + RG R P
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRM-RGDGLR--------PDQ 245
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
TF A + G +H VK GF +D+++ TAL+ MY+K G ++ +V +
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER--DVA--AFNVMIDGYVKLGCMDMA 252
+ + V WT +I G R G +A +F M + D++ A ++ +LG D+
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 253 QDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ + + + S+++ Y + G ++ + ++F+ M E++L +WNA+I G+ +N
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+AL LF EM + + T++S+L A + GAL +G I R + V
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
TAL+DMY+KCG + A+ F+ + K+ SW LI G+ +G+ ALE++ + G
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM 545
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEA- 486
PN + + VLS+C+H G+V +G + F +M FG+ P EH C+VDLL RA +++A
Sbjct: 546 EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAF 605
Query: 487 ----ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
EN + D GIIL AC + + + ++++ AG YV L +
Sbjct: 606 KFYKENFTRP-SIDVLGIILD----ACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHS 660
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTL 599
+A KRW DV + + M+ G K S IE++G+ F HS+ V L L
Sbjct: 661 FAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHSDDTVSLLKL 717
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 183/374 (48%), Gaps = 8/374 (2%)
Query: 126 TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFG 185
+M P TF +L+K C + GL +H + NGF D Y++++LV++Y KFG
Sbjct: 36 SMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFG 95
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNV----MID 241
+L ARKVF+EM ER V WTA+I Y+R G + EA L + M + + V M+
Sbjct: 96 LLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS 155
Query: 242 GYVKLGCMDMAQDLFDKMR--DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWN 299
G +++ + D F + D ++ SM++ YC+ V A+ +FD M ++++ +WN
Sbjct: 156 GVLEITQLQCLHD-FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWN 214
Query: 300 AMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARR 359
MI G+ E LKL M + P++ T + L + L++G + +
Sbjct: 215 TMISGYASVGNMSEILKLLYRM-RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVK 273
Query: 360 KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEV 419
D + + TALI MY KCG+ + + E +P K+ W +I+G GRA++AL V
Sbjct: 274 TGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIV 333
Query: 420 FEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGR 479
F M++ G + + V+++C G D G + G ++ + +
Sbjct: 334 FSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAK 393
Query: 480 AGCLDEAENLIQTM 493
G LD++ + + M
Sbjct: 394 CGHLDKSLVIFERM 407
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 235/499 (47%), Gaps = 38/499 (7%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C S + ++ L IH +L N ++ + + + A ++ HAR
Sbjct: 53 LKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFG-----------LLAHAR 101
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ F+ +RD +MI + E +L + M KPG T
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE---------MRFQGIKPGPVTLLE 152
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
++ G + + +H AV GF D+ V +++++Y K +G A+ +FD+M +R
Sbjct: 153 MLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVM------PERDVAAFNVMIDGY---VKLGCMDMA 252
VSW +I GY G+MSE KL M P++ ++ + G +++G M
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 253 QDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPH 312
Q + D ++ T++++ Y + G E++ + + +P K++ W MI G + +
Sbjct: 270 Q-IVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
+AL +F EML S S +E + SV+ + A LG+ DLG + G+ R +L
Sbjct: 329 KALIVFSEMLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL 387
Query: 373 IDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF-EMMIREGFRPN 431
I MYAKCG + ++ ++FE M E++ SWNA+I+G+A N +AL +F EM + + +
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVD 447
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
T++ +L AC+ G + G+ + I P +VD+ + G L+ A+
Sbjct: 448 SFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFD 507
Query: 492 TMPFD---ANGIILSSFLF 507
++ + + GI+++ + F
Sbjct: 508 SISWKDVVSWGILIAGYGF 526
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 182/296 (61%), Gaps = 8/296 (2%)
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQ---PHEALKLFREMLMSA 325
++V Y G + AR +F+ + E +L TWN ++ + +++ E L LF M
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---- 210
Query: 326 SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRA 385
V PNE++L++++ + A+LG G W + + L + V T+LID+Y+KCG + A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 386 RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
R +F+EM +++ + +NA+I G AV+G +E +E+++ +I +G P+ T + +SAC+H
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 446 GLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSS 504
GLVDEG + F +M+ +GI P++EHYGC+VDLLGR+G L+EAE I+ MP N + S
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 505 FLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMK 560
FL + D R E L+ + +E E +G+YVLL N+YA RWTDVE + +MK
Sbjct: 391 FLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMK 446
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/420 (21%), Positives = 178/420 (42%), Gaps = 47/420 (11%)
Query: 13 STAERKCLDLL-QCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFI----TTCASIAVST 67
++ +CL+L+ +CKS + L QIHA ++ + ++ L+K + T C S A+S
Sbjct: 6 TSKNHRCLNLISKCKS---LQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSI 62
Query: 68 SRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTM 127
R+ S+ FL N++I++ + ++ F + ++R+
Sbjct: 63 LRQIPNPSV----------------FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSN 106
Query: 128 TMTPFKPGGHTFTALVKGCT-ACMATREGLEVHGVAVK--NGFCLDLYVATALVDMYVKF 184
+ +P T+ +L K R G +H +K D +V ALV Y
Sbjct: 107 FV---RPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANC 163
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV 244
G L AR +F+ + E +W ++ Y ++ ++ + V + + +
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 245 KLGCMDMAQ---------DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
K C ++ + + N TS++ Y + G + AR +FD M ++++
Sbjct: 224 K-SCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+NAMI G + E ++L++ L+S + P+ T + + A + G +D G +Q
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKS-LISQGLVPDSATFVVTISACSHSGLVDEG--LQI 339
Query: 356 FARRKKLDG---SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNG 411
F K + G V L+D+ + G + A ++MP K A+ W + + +G
Sbjct: 340 FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 290 MPEKNLFTWNAMIGGHCKNK---QPHEALKLFREMLMSAS--VEPNEVTLLSVLPAVA-D 343
+P ++F +N +I N Q H A L+ ++L S S V PNE T S+ A D
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 344 LGALDLGGWIQGFARR--KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWN 401
G + + + ++ V AL+ YA CG++ AR LFE + E + A+WN
Sbjct: 126 AQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWN 185
Query: 402 ALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF 461
L+ +A + EV + +R RPNE++++ ++ +C + G G +
Sbjct: 186 TLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 462 GIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ ++DL + GCL A + M
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM 277
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 232/454 (51%), Gaps = 50/454 (11%)
Query: 181 YVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD------VMPE---- 230
++ ++ +A KVFDE+ E +S TAVI + + EA + F + P
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 231 ----------RDVA--------------AFNVMIDG-----YVKLGCMDMAQDLFDKMRD 261
RDV A NV + YVKL + A+ FD RD
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
NV+S T+++SGY + + E A +F MPE+++ TWNA+IGG + + EA+ F +M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARR---KKLDGSVRVSTALIDMYAK 378
L V PNE T + A++++ + G I A + K+ + V V +LI Y+K
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFN--VFVWNSLISFYSK 274
Query: 379 CGEIGRARLLFEEMPEKE--TASWNALINGFAVNGRAKEALEVFEMMIRE-GFRPNEITM 435
CG + + L F ++ E++ SWN++I G+A NGR +EA+ +FE M+++ RPN +T+
Sbjct: 275 CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTI 334
Query: 436 IGVLSACNHCGLVDEGRRCF-KAMEGFGIAP--QIEHYGCMVDLLGRAGCLDEAENLIQT 492
+GVL ACNH GL+ EG F KA+ + ++EHY CMVD+L R+G EAE LI++
Sbjct: 335 LGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKS 394
Query: 493 MPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDV 552
MP D + L C + A+ + ++++ YV+L N Y+ + W +V
Sbjct: 395 MPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNV 454
Query: 553 EDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
++ MK G + CS IEV + R FV D
Sbjct: 455 SLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNAD 488
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 171/389 (43%), Gaps = 58/389 (14%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-RDLCRGTATRTMTMTPFKP 134
++R+A + FD + D ++I + E F R LC G +P
Sbjct: 42 LIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG----------IRP 91
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
TF ++ T + G ++H A+K G +++V +A+++ YVK L AR+ F
Sbjct: 92 NEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCF 151
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
D+ + + VS T +I GY + + EA LF MPER V +N +I G+ + G + A +
Sbjct: 152 DDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVN 211
Query: 255 LF-DKMRDK----------------------------------------NVISWTSMVSG 273
F D +R+ NV W S++S
Sbjct: 212 TFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISF 271
Query: 274 YCQNGDVESARLMFDLMPE--KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNE 331
Y + G++E + L F+ + E +N+ +WN+MI G+ N + EA+ +F +M+ ++ PN
Sbjct: 272 YSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNN 331
Query: 332 VTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS---VRVSTALIDMYAKCGEIGRARLL 388
VT+L VL A G + G A D + + ++DM ++ G A L
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 389 FEEMP-EKETASWNALINGFAVNGRAKEA 416
+ MP + W AL+ G ++ + A
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIHSNKRLA 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 41/271 (15%)
Query: 74 VSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLC-RGTATRTMTMTPF 132
+S + ARR FD T + ++I+ + +F E +LFR + R T + F
Sbjct: 141 LSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGF 200
Query: 133 K----------------------PGGHTFTALVKGCTACMATREGLEVHGVAVKN-GFCL 169
P TF + + + G +H A+K G
Sbjct: 201 SQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF 260
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSR--VSWTAVIVGYTRCGDMSEARKLFDV 227
+++V +L+ Y K G + + F+++ E R VSW ++I GY G EA +F+
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 228 M-PERDVAAFNVMI---------DGYVKLGCMDMAQDLFDKMRDKNVIS---WTSMVSGY 274
M + ++ NV I G ++ G M + + D D N++ + MV
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVND-YDDPNLLELEHYACMVDML 379
Query: 275 CQNGDVESARLMFDLMP-EKNLFTWNAMIGG 304
++G + A + MP + + W A++GG
Sbjct: 380 SRSGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/465 (31%), Positives = 226/465 (48%), Gaps = 16/465 (3%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T + ++ C+ G VH K + +AL+ +Y K G A V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM--------PERDVAAFNVMIDGYVK 245
F M E+ V+W ++I G + G EA K+F M P+ D+ + +
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI--MTSVTNACAG 488
Query: 246 LGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
L + + M NV +S++ Y + G E A +F M +N+ WN+M
Sbjct: 489 LEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSM 548
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
I + +N P ++ LF ML S + P+ V++ SVL A++ +L G + G+ R
Sbjct: 549 ISCYSRNNLPELSIDLFNLML-SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
+ + ALIDMY KCG A +F++M K +WN +I G+ +G AL +F+
Sbjct: 608 IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRA 480
M + G P+++T + ++SACNH G V+EG+ F+ M + +GI P +EHY MVDLLGRA
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 481 GCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLR 540
G L+EA + I+ MP +A+ I L A +V + ++ME E YV L
Sbjct: 728 GLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 787
Query: 541 NLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
NLY + + +MK +G +K+ CS IEV R F +G
Sbjct: 788 NLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSG 832
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 211/467 (45%), Gaps = 28/467 (5%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
QIH FMLRNS+D + L I +S + R F + K + L
Sbjct: 191 QIHGFMLRNSLDTDSFLKTALIDMYFKFGLS----------IDAWRVFVEIEDKSNVVLW 240
Query: 96 NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREG 155
N MI F E L + + + ++ +FT + C+ + G
Sbjct: 241 NVMIVG-FGGSGICESSLDLYMLAKNNSVKLVST--------SFTGALGACSQSENSGFG 291
Query: 156 LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRC 215
++H VK G D YV T+L+ MY K G++G A VF + ++ W A++ Y
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 216 GDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMDMAQDLFDKMRDKNVISWTSMV 271
A LF M ++ V + + + LG + + + ++ + + S +++
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 272 SG----YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML-MSAS 326
S Y + G A L+F M EK++ W ++I G CKN + EALK+F +M S
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
++P+ + SV A A L AL G + G + L +V V ++LID+Y+KCG A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
+F M + +WN++I+ ++ N + ++++F +M+ +G P+ +++ VL A +
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ +G+ GI ++D+ + G AEN+ + M
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 204/450 (45%), Gaps = 25/450 (5%)
Query: 58 TTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRD 117
T+ ++ V + AV + + RD + NSMI +F R+F E FR
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFR- 157
Query: 118 LCRGTATRTMTMTPFKPGGHTFTALVK-GCTACMATRE-GLEVHGVAVKNGFCLDLYVAT 175
M + +P + + +V C RE G ++HG ++N D ++ T
Sbjct: 158 --------RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKT 209
Query: 176 ALVDMYVKFGVLGSARKVFDEMSERSRVS-WTAVIVGYTRCGDMSEARKLFDVMPERDVA 234
AL+DMY KFG+ A +VF E+ ++S V W +IVG+ G + L+ + V
Sbjct: 210 ALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVK 269
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW---------TSMVSGYCQNGDVESARL 285
+ G + C F + +V+ TS++S Y + G V A
Sbjct: 270 LVSTSFTGALG-ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
+F + +K L WNAM+ + +N + AL LF M SV P+ TL +V+ + LG
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM-RQKSVLPDSFTLSNVISCCSVLG 387
Query: 346 ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALIN 405
+ G + ++ + + + +AL+ +Y+KCG A L+F+ M EK+ +W +LI+
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLIS 447
Query: 406 GFAVNGRAKEALEVFEMMI--REGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
G NG+ KEAL+VF M + +P+ M V +AC + G + +M G+
Sbjct: 448 GLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ ++DL + G + A + +M
Sbjct: 508 VLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 171/384 (44%), Gaps = 23/384 (5%)
Query: 130 TPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
+PF TF +L+K C+A G +HG V G+ D ++AT+LV+MYVK G L
Sbjct: 54 SPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDY 113
Query: 190 ARKVFDEMSE-------RSRVSWTAVIVGYTRCGDMSEA----RKL--FDVMPERDVAAF 236
A +VFD S+ R W ++I GY + E R++ F V P D +
Sbjct: 114 AVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRP--DAFSL 171
Query: 237 NVMIDGYVKLGCMDMAQD------LFDKMRDKNVISWTSMVSGYCQNG-DVESARLMFDL 289
++++ K G + + D + T+++ Y + G +++ R+ ++
Sbjct: 172 SIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEI 231
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
+ N+ WN MI G + +L L+ + + SV+ + L A +
Sbjct: 232 EDKSNVVLWNVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGF 290
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
G I + L V T+L+ MY+KCG +G A +F + +K WNA++ +A
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
N AL++F M ++ P+ T+ V+S C+ GL + G+ + I
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 470 YGCMVDLLGRAGCLDEAENLIQTM 493
++ L + GC +A + ++M
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSM 434
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 176/429 (41%), Gaps = 83/429 (19%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A F + ++D S+I+ +F E +F D+ + KP
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS-------LKPDSDIM 479
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
T++ C A R GL+VHG +K G L+++V ++L+D+Y K G+ A KVF MS
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVM------PE----------------------- 230
+ V+W ++I Y+R + LF++M P+
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Query: 231 ----------RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDV 280
D N +ID YVK G A+++F KM+ K++I+W M+ GY +GD
Sbjct: 600 HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDC 659
Query: 281 ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
+A +FD M + A P++VT LS++ A
Sbjct: 660 ITALSLFDEMKK--------------------------------AGESPDDVTFLSLISA 687
Query: 341 VADLGALDLGGWIQGFARRK-KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETA 398
G ++ G I F ++ ++ ++ ++D+ + G + A + MP E +++
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNE-ITMIGVLSACNHCGLVDEGRRCFKA 457
W L++ + + + E ++R P T + +++ GL +E +
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLLGL 805
Query: 458 MEGFGIAPQ 466
M+ G+ Q
Sbjct: 806 MKEKGLHKQ 814
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 235/475 (49%), Gaps = 49/475 (10%)
Query: 112 FTLFRDLCRGTATRTMTMTPFKPGGHT--FTALVKGCTACMATREGLEVHGVAVKNGFCL 169
FT+F L T + ++TP P L+ CT+ R +HG
Sbjct: 21 FTIFHRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRR---IHG--------- 68
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF---- 225
D++ + L + F W ++ Y R +A +++
Sbjct: 69 DIFRSRILDQYPIAF-------------------LWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 226 --DVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGD 279
V+P+R + ++I V++ + ++L + + ++ YC+ G+
Sbjct: 110 RSTVLPDR--YSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGE 167
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
E+AR +FD PE+ L +WNA+IGG + +EA+++F +M S +EP++ T++SV
Sbjct: 168 FENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSG-LEPDDFTMVSVTA 226
Query: 340 AVADLGALDLGGWIQGFARRKKLD--GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
+ LG L L + + K + + + +LIDMY KCG + A +FEEM ++
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV 286
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
SW+++I G+A NG EALE F M G RPN+IT +GVLSAC H GLV+EG+ F
Sbjct: 287 VSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAM 346
Query: 458 MEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS 516
M+ F + P + HYGC+VDLL R G L EA+ +++ MP N ++ + C F DV
Sbjct: 347 MKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVE 406
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACS 571
AE V V++E G YV+L N+YA W DVE V+ +MK + K A S
Sbjct: 407 MAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS----ARK 192
++ +L+ C ++ H + + +G + Y + L+ ++ L A
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM---PERDVA----AFNVMIDGYVK 245
+FD + + + +I +R + F +M E D+A F+ +I +K
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 246 ---------LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
+ C + +F + D +V T ++ Y ++ + AR +FD +P+ ++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVF--LSDSHV--QTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
W+ ++ G+ + E L++FREML+ +EP+E ++ + L A A +GAL G WI F
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKG-LEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 357 ARRKK-LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
++K ++ V V TAL+DMYAKCG I A +F+++ + SW ALI G+A G AK+
Sbjct: 244 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 416 ALEVFEMMIRE-GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCM 473
A+ E + RE G +P+ + ++GVL+AC H G ++EGR + ME + I P+ EHY C+
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCI 363
Query: 474 VDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK--- 530
VDL+ RAG LD+A NLI+ MP + + L C K+V E ++ + +EK
Sbjct: 364 VDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNV 423
Query: 531 -ECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
E V L N+Y + +R + V+ M++ RG K SV+EVDG +FV+GD H
Sbjct: 424 EEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSH 483
Query: 590 SNLEVIQLTLGQL 602
NL I + L
Sbjct: 484 PNLLQIHTVIHLL 496
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 187/416 (44%), Gaps = 29/416 (6%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
+L + T+ + H+ + + + N ++K +T + + A SI
Sbjct: 15 ILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSI----- 69
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
FD+ + F+ ++MI + S+P R + P TF
Sbjct: 70 --FDSIEIPNSFVYDTMIRI---CSRSSQPHLGLRYFLLMVKEEEEDIAP---SYLTFHF 121
Query: 142 LVKGCTACMATREGLEVHGVAVKNG-FCLDLYVATALVDMYVKFGVLGSARKVFDEMSER 200
L+ C G ++H VKNG F D +V T ++ +YV+ +L ARKVFDE+ +
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQP 181
Query: 201 SRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLF 256
V W ++ GY RCG SE ++F M E D + + ++G + + +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 257 DKMRDK-----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ ++ K +V T++V Y + G +E+A +F + +N+F+W A+IGG+
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYA 301
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVST 370
+A+ + ++P+ V LL VL A A G L+ G ++ R ++ +
Sbjct: 302 KKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYS 361
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMIR 425
++D+ + G + A L E+MP K AS W AL+NG R + +E+ E+ ++
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG----CRTHKNVELGELAVK 413
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 279/577 (48%), Gaps = 54/577 (9%)
Query: 35 LQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFL 94
LQ+ + +++ ++++L + FIT SR R ARR FD +D
Sbjct: 194 LQLQSTVVKTGLESDLVVGNSFITM-------YSRSGS----FRGARRVFDEMSFKDMIS 242
Query: 95 CNSMITTHFAIRQFS-EPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR 153
NS+++ F E +FRD+ R +FT+++ C +
Sbjct: 243 WNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHV---------SFTSVITTCCHETDLK 293
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYT 213
++HG+ +K G+ L V L+ Y K GVL + + VF +MSER+ VSWT +I
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI---- 349
Query: 214 RCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSG 273
+ +A +F M V V G + + + + + ++ + T VS
Sbjct: 350 -SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN--AVKCNEQIKEGLKIHGLCIKTGFVSE 406
Query: 274 ----------YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
Y + +E A+ F+ + + + +WNAMI G +N HEALK+F +
Sbjct: 407 PSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF----L 462
Query: 324 SASVE--PNEVTLLSVLPAVA---DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
SA+ E PNE T SVL A+A D+ ++ G + L+ VS+AL+DMYAK
Sbjct: 463 SAAAETMPNEYTFGSVLNAIAFAEDI-SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAK 521
Query: 379 CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGV 438
G I + +F EM +K W ++I+ ++ +G + + +F MI+E P+ +T + V
Sbjct: 522 RGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSV 581
Query: 439 LSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
L+ACN G+VD+G F M E + + P EHY CMVD+LGRAG L EAE L+ +P
Sbjct: 582 LTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGP 641
Query: 498 NGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKH 557
+L S L +C +V +V ++M+ E +G YV + N+YA ++ W +++
Sbjct: 642 GESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRK 701
Query: 558 MMKMRGSYKEVACSVIEV---DGRF--REFVAGDYLH 589
M+ + KE S I+V +G + F +GD H
Sbjct: 702 AMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 738
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 180/401 (44%), Gaps = 19/401 (4%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T++ + C GL++ VK G DL V + + MY + G AR+VFDEM
Sbjct: 176 TYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 198 SERSRVSWTAVIVGYTRCGDMS-EARKLFDVMPERDVAAFNVMIDGYVKLGC----MDMA 252
S + +SW +++ G ++ G EA +F M V +V + C + +A
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 253 QDLFDKMRDKNVISWTS----MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ + + S ++S Y + G +E+ + +F M E+N+ +W MI N
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS---SN 352
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
K +A+ +F M V PNEVT + ++ AV + G I G + V
Sbjct: 353 KD--DAVSIFLNMRFDG-VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ I +YAK + A+ FE++ +E SWNA+I+GFA NG + EAL++F E
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM 469
Query: 429 RPNEITMIGVLSACNHCG--LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
PNE T VL+A V +G+RC + G+ ++D+ + G +DE+
Sbjct: 470 -PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 487 ENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
E + M N + +S + A D + + +K
Sbjct: 529 EKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 194/435 (44%), Gaps = 35/435 (8%)
Query: 75 SIVRHARRFFDATHKRDEFLC-NSMITTHFAIRQFSEPFTLFR-DLCRGTATRTMTMTPF 132
S R A + FD + +R+ N I+ + ++F+ +L G R M
Sbjct: 22 SPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEV-- 79
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
T +K C + + G ++HG + +GF + V+ A++ MY K G +A
Sbjct: 80 -----TLCLALKACRGDL--KRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALC 132
Query: 193 VFDEMSERSRVSWTAVIVGY-------TRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK 245
+F+ + + VSW ++ G+ M A +FD +F V +G++
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL- 191
Query: 246 LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
LG + + + + +++ S ++ Y ++G AR +FD M K++ +WN+++ G
Sbjct: 192 LG-LQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 306 CKNKQ-PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ EA+ +FR+M M VE + V+ SV+ L L I G ++ +
Sbjct: 251 SQEGTFGFEAVVIFRDM-MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
+ V L+ Y+KCG + + +F +M E+ SW +I + +A+ +F M
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMR 364
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRR----CFKAMEGFGIAPQIEHYGCMVDLLGRA 480
+G PNE+T +G+++A + EG + C K GF P + + + L +
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT--GFVSEPSVGN--SFITLYAKF 420
Query: 481 GCLDEAENLIQTMPF 495
L++A+ + + F
Sbjct: 421 EALEDAKKAFEDITF 435
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 150/529 (28%), Positives = 263/529 (49%), Gaps = 28/529 (5%)
Query: 31 ITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKR 90
++ + Q H FM++ + N+L L K + I R F DA
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKI-----------------REFDDADKLF 94
Query: 91 DEFLCNSMITTHFAIRQF--SEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
DE +++T + I + T R + T +F L++ CT
Sbjct: 95 DEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTD 154
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
+ G+++H + VK G + +T+LV Y K G++ AR+VF+ + +R V W A+
Sbjct: 155 STNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNAL 214
Query: 209 IVGYTRCGDMSEARKLFDVMPER------DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK 262
+ Y G + EA L +M D F+ ++ + LF
Sbjct: 215 VSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQF 274
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML 322
++ T++++ Y ++ + AR F+ M +N+ +WNAMI G +N + EA++LF +ML
Sbjct: 275 DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML 334
Query: 323 MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
+ +++P+E+T SVL + A A+ +Q +K + V+ +LI Y++ G +
Sbjct: 335 LE-NLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNL 393
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
A L F + E + SW ++I A +G A+E+L++FE M+++ +P++IT + VLSAC
Sbjct: 394 SEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSAC 452
Query: 443 NHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGII 501
+H GLV EG RCFK M E + I + EHY C++DLLGRAG +DEA +++ +MP + +
Sbjct: 453 SHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHA 512
Query: 502 LSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
L++F C + + ++ +++E +Y +L N Y +E W
Sbjct: 513 LAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWN 561
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 189/417 (45%), Gaps = 51/417 (12%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
C + +Q+H M++ ++++ L F C ++ AR
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG--------------LIVEAR 197
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
R F+A RD L N++++++ E F L + L R F+ TF++
Sbjct: 198 RVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK-LMGSDKNR------FRGDYFTFSS 250
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
L+ C +G ++H + K + D+ VATAL++MY K L AR+ F+ M R+
Sbjct: 251 LLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGC---MDMAQD 254
VSW A+IVG+ + G+ EA +LF M + D F ++ K + Q
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 255 LFDKMRDKNVIS-WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHE 313
+ K + +S S++S Y +NG++ A L F + E +L +W ++IG + E
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK---KLDGSVRVST 370
+L++F ML ++P+++T L VL A + G + G ++ F R K++ T
Sbjct: 427 SLQMFESMLQ--KLQPDKITFLEVLSACSHGGLVQEG--LRCFKRMTEFYKIEAEDEHYT 482
Query: 371 ALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGR-------AKEALEV 419
LID+ + G I A + MP E T + A G ++ + AK+ LE+
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEI 539
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 238/463 (51%), Gaps = 50/463 (10%)
Query: 148 ACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTA 207
C G+++H +A+K+GF +++YV T+LV MY + G A ++F+++ +S V++ A
Sbjct: 141 GCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNA 200
Query: 208 VIVGYTRCGDMSEARKLFDVMPE------RDVAAFNV----------------------- 238
I G G M+ +F++M + DV N
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKK 260
Query: 239 -----------MIDGYVKLGCMDMAQDLFDKMRD-KNVISWTSMVSGYCQNGDVESARLM 286
+ID Y K C A +F +++D +N+ISW S++SG NG E+A +
Sbjct: 261 EFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVEL 320
Query: 287 FDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
F+ + + L TWN++I G + + EA K F ML S + P+ L S+L A +
Sbjct: 321 FEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSACS 379
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE--EMPEKETASW 400
D+ L G I G + + + V T+LIDMY KCG AR +F+ E K+ W
Sbjct: 380 DIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 401 NALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-E 459
N +I+G+ +G + A+E+FE++ E P+ T VLSAC+HCG V++G + F+ M E
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 460 GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAE 519
+G P EH GCM+DLLGR+G L EA+ +I M + + + SS L +C D E
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSSVYSSLLGSCRQHLDPVLGE 558
Query: 520 RVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
+ ++E E +V+L ++YA +RW DVE ++ ++ +
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQK 601
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 181/362 (50%), Gaps = 21/362 (5%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P TF L+K C +G +H VK GF +D++ ATALV MY+K + A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPE----RDVAAFNVM-----IDGY 243
DEM ER S A + G G +A ++F D V +V+ I+G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 244 VKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
++L C+ M + V TS+VS Y + G+ A MF+ +P K++ T+NA I
Sbjct: 149 MQLHCLAMKSGF-----EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFIS 203
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G +N + +F M +S EPN+VT ++ + A A L L G + G +K+
Sbjct: 204 GLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPE-KETASWNALINGFAVNGRAKEALEVFEM 422
V TALIDMY+KC A ++F E+ + + SWN++I+G +NG+ + A+E+FE
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGC 482
+ EG +P+ T ++S + G V E + F+ M + P ++ C+ LL + C
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK---CLTSLL--SAC 378
Query: 483 LD 484
D
Sbjct: 379 SD 380
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 56/311 (18%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P TF + C + + + G ++HG+ +K F + V TAL+DMY K SA
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 193 VFDEMSE-RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLG 247
VF E+ + R+ +SW +VI G G A +LF+ + D A +N +I G+ +LG
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 248 CMDMAQDLFDKM---------------------------------------RDKNVISWT 268
+ A F++M ++++ T
Sbjct: 348 KVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLT 407
Query: 269 SMVSGYCQNGDVESARLMFDLM---PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
S++ Y + G AR +FD P+ +F WN MI G+ K+ + A+++F E+L
Sbjct: 408 SLIDMYMKCGLSSWARRIFDRFEPKPKDPVF-WNVMISGYGKHGECESAIEIF-ELLREE 465
Query: 326 SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST----ALIDMYAKCGE 381
VEP+ T +VL A + G ++ G I R + + + ST +ID+ + G
Sbjct: 466 KVEPSLATFTAVLSACSHCGNVEKGSQI---FRLMQEEYGYKPSTEHIGCMIDLLGRSGR 522
Query: 382 IGRARLLFEEM 392
+ A+ + ++M
Sbjct: 523 LREAKEVIDQM 533
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 15/180 (8%)
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
K D NS+I+ + + E F F M P T+L+ C+
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFE---------RMLSVVMVPSLKCLTSLLSACSD 380
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR--VSWT 206
+ G E+HG +K D++V T+L+DMY+K G+ AR++FD + + V W
Sbjct: 381 IWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWN 440
Query: 207 AVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGCMDMAQDLFDKMRDK 262
+I GY + G+ A ++F+++ E V A F ++ G ++ +F M+++
Sbjct: 441 VMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEE 500
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 178/311 (57%), Gaps = 16/311 (5%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHC--KNKQPHEALK---LFREML 322
T+++ Y +NGD+ AR +FD MPE+ TWNAMIGG+C K+K H A K LFR
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 323 MSAS-VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV--STALIDMYAKC 379
S V P + T++ VL A++ G L++G + G+ + V V TAL+DMY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G + A +FE M K +W ++ G A+NGR E + M G +PNEIT +L
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 440 SACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDAN 498
SA H GLV+EG FK+M+ FG+ P IEHYGC+VDLLG+AG + EA I MP +
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPD 390
Query: 499 GIILSSFLFACGHFKDVSRAERVLRETVKMEKE---CAG----DYVLLRNLYATEKRWTD 551
I+L S AC + + E + + +++E+E +G DYV L N+ A + +W +
Sbjct: 391 AILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVE 450
Query: 552 VEDVKHMMKMR 562
VE ++ MK R
Sbjct: 451 VEKLRKEMKER 461
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 167/434 (38%), Gaps = 108/434 (24%)
Query: 20 LDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH 79
L LLQ ++ KT+ QIHA ++ N +N +L K I S E+ S + H
Sbjct: 11 LSLLQ-QNSKTLIQAKQIHAQLVINGCHDN-SLFGKLIGHYCS-----KPSTESSSKLAH 63
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
F H D+FL N+++ + S+P D R A + TF
Sbjct: 64 LLVFPRFGHP-DKFLFNTLL-------KCSKP----EDSIRIFANYASKSSLLYLNERTF 111
Query: 140 TALVKGCTACMAT---REGLEVHGVAVKNGFCLDL-YVATALVDMYVKFGVLGSARKVFD 195
++ C ++ R G VHG+ K GF + + T L+ Y K G L ARKVFD
Sbjct: 112 VFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFD 171
Query: 196 EMSERSRVSWTAVIVGYTRCGDMS--EARK------------------------------ 223
EM ER+ V+W A+I GY D ARK
Sbjct: 172 EMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAIS 231
Query: 224 ---LFDV-------------MPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW 267
L ++ PE DV ++D Y K GC++ A +F+ M+ KNV +W
Sbjct: 232 QTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTW 291
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
TSM +G NG + + M E + +
Sbjct: 292 TSMATGLALNGRGNETPNLLNRMAE--------------------------------SGI 319
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV---STALIDMYAKCGEIGR 384
+PNE+T S+L A +G ++ G I+ F K G V ++D+ K G I
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEG--IELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQE 377
Query: 385 ARLLFEEMPEKETA 398
A MP K A
Sbjct: 378 AYQFILAMPIKPDA 391
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 25/261 (9%)
Query: 252 AQDLFDKMRDKNVISWTSMVSGYCQNGDVESAR-----LMFDLMPEKNLFTWNAMIGGHC 306
AQ + + D ++ + ++ YC ES+ L+F + F +N ++
Sbjct: 29 AQLVINGCHDNSL--FGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFLFNTLL---- 82
Query: 307 KNKQPHEALKLFREMLMSASV-EPNEVTLLSVL---PAVADLGALDLGGWIQGFARRKK- 361
K +P +++++F +S+ NE T + VL A AL +G + G ++
Sbjct: 83 KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGF 142
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV-----NGRAKEA 416
L S + T L+ YAK G++ AR +F+EMPE+ + +WNA+I G+ N A++A
Sbjct: 143 LYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKA 202
Query: 417 LEVFEMM--IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHY--GC 472
+ +F G RP + TM+ VLSA + GL++ G +E G P+++ +
Sbjct: 203 MVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTA 262
Query: 473 MVDLLGRAGCLDEAENLIQTM 493
+VD+ + GCL+ A ++ + M
Sbjct: 263 LVDMYSKCGCLNNAFSVFELM 283
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 164/596 (27%), Positives = 287/596 (48%), Gaps = 28/596 (4%)
Query: 27 SKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSI--VRHARRFF 84
+ T T+L+Q+ A + + ++LN + ++ V TS S + ARR F
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 85 DATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVK 144
D + RD N+MI + + FR+ M M+ P T++ ++
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRN---------MLMSGVDPTQFTYSIVLN 308
Query: 145 GCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVS 204
GC+ + G +H + + DL + AL+DMY G + A VF + + VS
Sbjct: 309 GCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVS 368
Query: 205 WTAVIVGYTRCGDMSEA----RKLFDV-MPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
W ++I G + G +A R+L + P D F+ I + + L ++
Sbjct: 369 WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQV 428
Query: 260 R----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
+++V T+++S Y +N + ESA+ +FD+M E+++ W MI GH + A+
Sbjct: 429 TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAV 488
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+ F EM + + +L SV+ A +D+ L G A R D + V AL+DM
Sbjct: 489 QFFIEMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
Y K G+ A +F + WN+++ ++ +G ++AL FE ++ GF P+ +T
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 436 IGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI-QTMP 494
+ +L+AC+H G +G+ + M+ GI +HY CMV+L+ +AG +DEA LI Q+ P
Sbjct: 608 LSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPP 667
Query: 495 FDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVED 554
+ + + L AC + +++ + +K++ E ++LL NLYA RW DV +
Sbjct: 668 GNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAE 727
Query: 555 VKHMMKMRGSYKEVACSVIEVDGRFRE-FVAGDYLHSNLEVI---QLTLGQLWKHM 606
++ ++ S K+ S IEV+ + F +GD SN EV+ Q L +L ++M
Sbjct: 728 MRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD--QSNPEVVSQAQDELNRLKRNM 781
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 221/491 (45%), Gaps = 50/491 (10%)
Query: 17 RKCLDLLQCKSKKTITTLLQIHAFMLR-------NSVDNNLNLLAKFITTCASIAVSTSR 69
RKC+ + K + QIHA +L S N NL++ ++ C S+
Sbjct: 102 RKCVSITVLKRAR------QIHALVLTAGAGAATESPYANNNLISMYVR-CGSL------ 148
Query: 70 RNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQF-SEPFTLFRDLCRGTATRTMT 128
AR+ FD R+ N++ + + F S F L T M
Sbjct: 149 --------EQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPL---------TTHMA 191
Query: 129 MTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLG 188
KP TFT+LV+ C G ++ +K G+ ++ V T+++ MY G L
Sbjct: 192 FEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLE 251
Query: 189 SARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYV 244
SAR++FD ++ R V+W +IVG + + + F M V ++++++G
Sbjct: 252 SARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCS 311
Query: 245 KLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNA 300
KLG + + + ++ + ++ +++ YC GD+ A +F + NL +WN+
Sbjct: 312 KLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNS 371
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I G +N +A+ ++R +L ++ P+E T + + A A+ G + G +
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF 420
+ SV V T L+ MY K E A+ +F+ M E++ W +I G + G ++ A++ F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 421 EMMIREGFRPNEITMIGVLSACNHCGLVDEGR--RCFKAMEGFGIAPQIEHYGCMVDLLG 478
M RE R + ++ V+ AC+ ++ +G C GF + G +VD+ G
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSV--CGALVDMYG 549
Query: 479 RAGCLDEAENL 489
+ G + AE +
Sbjct: 550 KNGKYETAETI 560
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/484 (29%), Positives = 236/484 (48%), Gaps = 10/484 (2%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P T + K C+ EG + HG +K G +V LV MY G A +
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGC---- 248
V D++ +++ + GY CG E + D N+ ++L
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 249 MDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
+++A + +M + V + ++++ Y + G V A+ +FD +N+F ++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ ++K EAL LF +M + V PNE T +L ++A+L L G + G +
Sbjct: 313 YFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
V V AL++MYAK G I AR F M ++ +WN +I+G + +G +EALE F+ MI
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 425 REGFRPNEITMIGVLSACNHCGLVDEGRRCF-KAMEGFGIAPQIEHYGCMVDLLGRAGCL 483
G PN IT IGVL AC+H G V++G F + M+ F + P I+HY C+V LL +AG
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 484 DEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLY 543
+AE+ ++T P + + + + L AC ++ ++V ++ +G YVLL N++
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 544 ATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLW 603
A + W V V+ +M RG KE S I + + F+A D H + +I + ++
Sbjct: 552 AKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVM 611
Query: 604 KHMK 607
+K
Sbjct: 612 SKIK 615
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 260 RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFR 319
R ++ S+++ Y + + AR +FDLMPE+N+ +W AM+ G+ + E LKLF+
Sbjct: 65 RAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFK 124
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
M S PNE V + ++ G ++ G G + L V L+ MY+ C
Sbjct: 125 SMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLC 184
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
G A + +++P + + +++ ++G+ G KE L+V E F N +T + L
Sbjct: 185 SGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244
Query: 440 SACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG 499
++ ++ + M FG ++E G ++++ G+ G + A+ + A
Sbjct: 245 RLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT--HAQN 302
Query: 500 IILSSFLFACGHFKDVSRAE 519
I L++ + +F+D S E
Sbjct: 303 IFLNTTIMD-AYFQDKSFEE 321
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 169/395 (42%), Gaps = 18/395 (4%)
Query: 130 TPFKPGGHTFTALVKGCTACMATREGLEVHG---VAVKNGFCLDLYVATALVDMYVKFGV 186
TPF L+K C R G +H V ++ D Y +L+++YVK
Sbjct: 27 TPFPID--RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRE 84
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
ARK+FD M ER+ VSW A++ GY G E KLF M + N + V
Sbjct: 85 TVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFK 144
Query: 247 GCMDMAQDLFDKMRDKNVISWTSMVSGYCQN----------GDVESARLMFDLMPEKNLF 296
C + + K + + + + +N G+ E+ R++ DL P +L
Sbjct: 145 SCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDL-PYCDLS 203
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+++ + G+ + E L + R+ V N +T LS L ++L L+L +
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
R + V ALI+MY KCG++ A+ +F++ + +++ + + +EA
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
L +F M + PNE T +L++ L+ +G + G + +V++
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNM 382
Query: 477 LGRAGCLDEAENLIQTMPFDANGIILSSFLFACGH 511
++G +++A M F + + ++ + C H
Sbjct: 383 YAKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSH 416
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V +A+R FD TH ++ FL +++ +F + F E LF M P
Sbjct: 288 VLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFS---------KMDTKEVPPNE 338
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+TF L+ ++G +HG+ +K+G+ + V ALV+MY K G + ARK F
Sbjct: 339 YTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG 398
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
M+ R V+W +I G + G EA + FD M
Sbjct: 399 MTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 249/483 (51%), Gaps = 32/483 (6%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS----ARK 192
++ +L+ C ++ H + + +G + Y + L+ ++ L A
Sbjct: 9 QSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASS 68
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM---PERDVA----AFNVMIDGYVK 245
+FD + + + +I +R + F +M E D+ F+ +I +K
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 246 ---------LGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
+ C + +F + D +V T ++ Y ++ + AR +FD +P+ ++
Sbjct: 129 ACFFSVGKQIHCWVVKNGVF--LSDGHV--QTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
W+ ++ G+ + E L++F+EML+ +EP+E ++ + L A A +GAL G WI F
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRG-IEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 357 ARRKK-LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKE 415
++K+ ++ V V TAL+DMYAKCG I A +FE++ + SW ALI G+A G AK+
Sbjct: 244 VKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 416 ALEVFEMMIRE-GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCM 473
A + + RE G +P+ + ++GVL+AC H G ++EGR + ME +GI P+ EHY C+
Sbjct: 304 ATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCI 363
Query: 474 VDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK--- 530
VDL+ RAG LD+A +LI+ MP + + L C K+V E ++ + +EK
Sbjct: 364 VDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNV 423
Query: 531 -ECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLH 589
E V L N+Y + +R + V+ M++ RG K S++EVDG +FV+GD H
Sbjct: 424 EEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSH 483
Query: 590 SNL 592
NL
Sbjct: 484 PNL 486
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 178/397 (44%), Gaps = 25/397 (6%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
+L + T+ + H+ + + + N ++K +T + + A SI
Sbjct: 15 ILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSI----- 69
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
FD+ + F+ ++MI + S+P R +TP TF
Sbjct: 70 --FDSIEIPNSFVYDTMIRI---CSRSSQPHLGLRYFLLMVKEEEEDITP---SYLTFHF 121
Query: 142 LVKGCTACMATREGLEVHGVAVKNG-FCLDLYVATALVDMYVKFGVLGSARKVFDEMSER 200
L+ C G ++H VKNG F D +V T ++ +YV+ +L ARKVFDE+ +
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQP 181
Query: 201 SRVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLF 256
V W ++ GY RCG SE ++F M E D + + ++G + + +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 257 DKMRDK-----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
+ ++ K +V T++V Y + G +E+A +F+ + +N+F+W A+IGG+
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVST 370
+A + ++P+ V LL VL A A G L+ G ++ R + +
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 371 ALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALING 406
++D+ + G + A L E+MP K AS W AL+NG
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRD-LCRGTATRTMTMTPFKPGGHT 138
AR+ FD + D + ++ + SE +F++ L RG +P +
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG----------IEPDEFS 220
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFC-LDLYVATALVDMYVKFGVLGSARKVFDEM 197
T + C A +G +H K + D++V TALVDMY K G + +A +VF+++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL 280
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD-VAAFNVMIDGYVKL----GCMDMA 252
+ R+ SW A+I GY G +A D + D + +V++ G + G ++
Sbjct: 281 TRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEG 340
Query: 253 QDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMPEKNLFT-WNAMIGGHC 306
+ + + M + I+ ++ +V C+ G ++ A + + MP K L + W A++ G C
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG-C 399
Query: 307 KNKQPHEALKLFREMLM---SASVEPNEVTLLSV 337
+ + E +L + L+ +VE E L+ +
Sbjct: 400 RTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 254/532 (47%), Gaps = 84/532 (15%)
Query: 47 DNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIR 106
++ L+LL +F+ + S + + + V A+ + + + N++I ++
Sbjct: 14 EDALHLLQRFLYS--------SNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTG 65
Query: 107 QFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNG 166
++ LF M + +P TF +L+K + + G+ +HG A+K G
Sbjct: 66 EYKTSLALFTH---------MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 167 FCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD 226
F D +V T+ +V+F Y GD+ +RK+F
Sbjct: 117 FLWDPFVQTS----FVRF---------------------------YGEVGDLESSRKMF- 144
Query: 227 VMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLM 286
D + + V++ S++ +NG+++ A
Sbjct: 145 ------------------------------DDILNPCVVACNSLLDACGRNGEMDYAFEY 174
Query: 287 FDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMS--ASVEPNEVTLLSVLPAVA-- 342
F MP ++ +W +I G K +AL +F EM+ + A + PNE T +SVL + A
Sbjct: 175 FQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANF 234
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNA 402
D G + LG I G+ K++ + + TAL+DMY K G++ A +F+++ +K+ +WNA
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 403 LINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGF 461
+I+ A NGR K+ALE+FEMM PN IT++ +L+AC LVD G + F ++ +
Sbjct: 295 IISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEY 354
Query: 462 GIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERV 521
I P EHYGC+VDL+GRAG L +A N IQ++PF+ + +L + L AC ++ V
Sbjct: 355 KIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTV 414
Query: 522 LRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVI 573
++ + ++ + G YV L A + W++ E ++ M G K A SV+
Sbjct: 415 GKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 265/549 (48%), Gaps = 32/549 (5%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V A F + + N++I +R F L L A TM F P
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLL-GLMEMKAAVTMDAGTFAP-- 208
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
L+ C ++ VH +K G ++ + A++ Y G + A++VFD
Sbjct: 209 --LLTLLDDPMFCNLLKQ---VHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 197 MS-ERSRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVKLGCMDM 251
+ + +SW ++I G+++ A +LF M E D+ + ++ C
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA-----CSGE 318
Query: 252 AQDLFDKMRDKNVI---------SWTSMVSGYCQ--NGDVESARLMFDLMPEKNLFTWNA 300
+F K VI + +++S Y Q G +E A +F+ + K+L +WN+
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I G + +A+K F L S+ ++ ++ ++L + +DL L LG I A +
Sbjct: 379 IITGFAQKGLSEDAVKFF-SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS 437
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE-TASWNALINGFAVNGRAKEALEV 419
+ V ++LI MY+KCG I AR F+++ K T +WNA+I G+A +G + +L++
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDL 497
Query: 420 FEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLG 478
F M + + + +T +L+AC+H GL+ EG ME + I P++EHY VDLLG
Sbjct: 498 FSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLG 557
Query: 479 RAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVL 538
RAG +++A+ LI++MP + + ++L +FL C ++ A +V +++E E YV
Sbjct: 558 RAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVS 617
Query: 539 LRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLT 598
L ++Y+ K+W + VK MMK RG K S IE+ + + F A D + + I +
Sbjct: 618 LSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMM 677
Query: 599 LGQLWKHMK 607
+ L + M+
Sbjct: 678 IKDLTQEMQ 686
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 193/427 (45%), Gaps = 57/427 (13%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
+A FD KRD N+MI+ + + + + + LF + R + G++
Sbjct: 53 YANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS---------DVDGYS 103
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
F+ L+KG + G +VHG+ +K G+ ++YV ++LVDMY K + A + F E+S
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS 163
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER-----DVAAFN---VMIDGYVKLGCMD 250
E + VSW A+I G+ + D+ A L +M + D F ++D + +
Sbjct: 164 EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLK 223
Query: 251 MAQDLFDKMRDKNVISW-TSMVSGYCQNGDVESARLMFD-LMPEKNLFTWNAMIGGHCKN 308
K+ ++ I+ +M+S Y G V A+ +FD L K+L +WN+MI G K+
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+ A +LF +M VE + T +L A + G + G +K L+
Sbjct: 284 ELKESAFELFIQM-QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 342
Query: 369 STALIDMYAK--CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM--- 423
+ ALI MY + G + A LFE + K+ SWN++I GFA G +++A++ F +
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 424 --------------------------------IREGFRPNEITMIGVLSACNHCGLVDEG 451
+ GF NE + ++ + CG+++
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 452 RRCFKAM 458
R+CF+ +
Sbjct: 463 RKCFQQI 469
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 9/294 (3%)
Query: 159 HGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDM 218
H A+K G D+YV+ ++D Y+KFG LG A +FDEM +R VSW +I GYT CG +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 219 SEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSM 270
+A LF M + D +F+ ++ G + D+ + + + + NV +S+
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 271 VSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
V Y + VE A F + E N +WNA+I G + + A L M M A+V +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
T +L + D +L + + L + + A+I YA CG + A+ +F+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 391 EM-PEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
+ K+ SWN++I GF+ + + A E+F M R + T G+LSAC+
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 245/511 (47%), Gaps = 33/511 (6%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
HA FD +RD NS +++H ++ LF + R + + HT
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLS---------SHT 86
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
FT ++ C+ G +VH + +K G TAL+DMY K+G L + +VF+ +
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVE 146
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMDMAQD 254
E+ VSW A++ G+ R G EA +F M V + VK L + +
Sbjct: 147 EKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQ 206
Query: 255 LFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFD-LMPEKNLFTWNAMIGGHCKNK 309
+ + RD V+ T+M+S Y G + A +++ L + N++I G +N+
Sbjct: 207 VHAMVVVTGRDLVVLG-TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR 265
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
EA +LMS PN L S L +D L +G I A R ++
Sbjct: 266 NYKEAF-----LLMSRQ-RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIRE--G 427
L+DMY KCG+I +AR +F +P K SW ++I+ +AVNG +ALE+F M E G
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
PN +T + V+SAC H GLV EG+ CF M E + + P EHY C +D+L +AG +E
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEI 439
Query: 487 ENLIQTMPFDANG----IILSSFLFACGHFKDVSRAERVLRETV-KMEKECAGDYVLLRN 541
L++ M + N I + L AC D++R E V R + + E A YVL+ N
Sbjct: 440 WRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSN 499
Query: 542 LYATEKRWTDVEDVKHMMKMRGSYKEVACSV 572
YA +W VE+++ +K +G K S+
Sbjct: 500 FYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 241/487 (49%), Gaps = 20/487 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ FD +R FL NS+I + QF+ +LF + R +P T+
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDT---------RPDNFTY 109
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
L +G + T+ +HG+A+ +G D +A+V Y K G++ A K+F + +
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD--------VAAFNVMIDGYVKLGCMDM 251
W +I+GY CG + LF++M R VA + +ID + L +
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 252 AQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
D + ++V+ Y + + SA +F+ + E +L +++I G+ +
Sbjct: 230 HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNH 289
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
EAL LF E+ MS +P+ V + VL + A+L G + + R L+ ++V +A
Sbjct: 290 KEALHLFAELRMSGK-KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSA 348
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
LIDMY+KCG + A LF +PEK S+N+LI G ++G A A E F ++ G P+
Sbjct: 349 LIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPD 408
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
EIT +L C H GL+++G+ F+ M+ FGI PQ EHY MV L+G AG L+EA +
Sbjct: 409 EITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFV 468
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDY-VLLRNLYATEKRW 549
++ + IL + L C ++ AE V K +E Y V+L N+YA RW
Sbjct: 469 MSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRW 528
Query: 550 TDVEDVK 556
+VE ++
Sbjct: 529 DEVERLR 535
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 14/382 (3%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG 216
++H K+ D Y AT L Y L SARK+FD ERS W ++I Y +
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAH 85
Query: 217 DMSEARKLFDVMPERDVAAFNV----MIDGYVK------LGCMDMAQDLFDKMRDKNVIS 266
+ LF + D N + G+ + L C+ + D+ I
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQ--IC 143
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
+++V Y + G + A +F +P+ +L WN MI G+ + + LF ++
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF-NLMQHRG 202
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+PN T++++ + D L + + F + LD V AL++MY++C I A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
+F + E + + ++LI G++ G KEAL +F + G +P+ + + VL +C
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELS 322
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL 506
G+ + G+ I+ ++D+ + G L A +L +P + N + +S +
Sbjct: 323 DSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLI 381
Query: 507 FACGHFKDVSRAERVLRETVKM 528
G S A E ++M
Sbjct: 382 LGLGLHGFASTAFEKFTEILEM 403
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 236/484 (48%), Gaps = 22/484 (4%)
Query: 138 TFTALVKGCTA---CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF 194
T T ++ C C+ T+ +H +A+ +G+ ++ V L+ Y K G S R VF
Sbjct: 157 TLTIVLSVCDTPEFCLVTKM---IHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
D MS R+ ++ TAVI G + +LF +M V +V L +Q
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY--LSALAACSGSQR 271
Query: 255 LFDKMRDKNVISW-----------TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
+ + + ++ W ++++ Y + G +E A +F+ E + + ++
Sbjct: 272 IVEGQQIHALL-WKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G +N EA++ F ML A VE + + +VL +L LG + ++K
Sbjct: 331 GLAQNGSEEEAIQFFIRML-QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
G+ V+ LI+MY+KCG++ ++ +F MP++ SWN++I FA +G AL+++E M
Sbjct: 390 GNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM 449
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGC 482
+P ++T + +L AC+H GL+D+GR M E GI P+ EHY C++D+LGRAG
Sbjct: 450 TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGL 509
Query: 483 LDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNL 542
L EA++ I ++P + I + L AC D E + + + + ++L+ N+
Sbjct: 510 LKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANI 569
Query: 543 YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
Y++ +W + MK G KE S IE++ + FV D LH E I L L
Sbjct: 570 YSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGL 629
Query: 603 WKHM 606
+ M
Sbjct: 630 FPVM 633
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 166/385 (43%), Gaps = 31/385 (8%)
Query: 37 IHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCN 96
IHA + + D +++ K IT+ S S R FD R+
Sbjct: 177 IHALAILSGYDKEISVGNKLITSYFKCGCSVS-----------GRGVFDGMSHRNVITLT 225
Query: 97 SMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGL 156
++I+ + LF + RG P T+ + + C+ EG
Sbjct: 226 AVISGLIENELHEDGLRLFSLMRRGLV---------HPNSVTYLSALAACSGSQRIVEGQ 276
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG 216
++H + K G +L + +AL+DMY K G + A +F+ +E VS T ++VG + G
Sbjct: 277 QIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNG 336
Query: 217 DMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR--------DKNVISWT 268
EA + F M + V ++ + + +D + L ++ N
Sbjct: 337 SEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNN 396
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
+++ Y + GD+ ++ +F MP++N +WN+MI ++ ALKL+ EM + V+
Sbjct: 397 GLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM-TTLEVK 455
Query: 329 PNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARL 387
P +VT LS+L A + +G +D G + ++ T +IDM + G + A+
Sbjct: 456 PTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKS 515
Query: 388 LFEEMPEK-ETASWNALINGFAVNG 411
+ +P K + W AL+ + +G
Sbjct: 516 FIDSLPLKPDCKIWQALLGACSFHG 540
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 4/230 (1%)
Query: 264 VISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
++ W S++S Y + G + A +FD MP +++ + N + G +N++ L + ML
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 324 SASVEPNEVTLLSVLPAVADLGALDL-GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
S + L+++ +V D L I A D + V LI Y KCG
Sbjct: 150 SGGFDH---ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
R +F+ M + + A+I+G N ++ L +F +M R PN +T + L+AC
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 443 NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQT 492
+ + EG++ + +GI ++ ++D+ + G +++A + ++
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 232/486 (47%), Gaps = 14/486 (2%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P TF K + G ++H +AVK G LD++V + DMY K + ARK+
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLF------DVMPERDV--AAFNVMIDG-YV 244
FDE+ ER+ +W A I G EA + F D P A N D ++
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 245 KLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
LG M + + D +V ++ Y + + S+ ++F M KN +W +++
Sbjct: 226 NLG-MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAA 284
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+ +N + +A L+ VE ++ + SVL A A + L+LG I A + ++
Sbjct: 285 YVQNHEDEKASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 343
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMI 424
++ V +AL+DMY KCG I + F+EMPEK + N+LI G+A G+ AL +FE M
Sbjct: 344 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 425 REGF--RPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAG 481
G PN +T + +LSAC+ G V+ G + F +M +GI P EHY C+VD+LGRAG
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 463
Query: 482 CLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRN 541
++ A I+ MP + + AC K++ + +G++VLL N
Sbjct: 464 MVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSN 523
Query: 542 LYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQ 601
+A RW + V+ +K G K S I V + F A D H + IQ TL +
Sbjct: 524 TFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAK 583
Query: 602 LWKHMK 607
L M+
Sbjct: 584 LRNEME 589
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 186/437 (42%), Gaps = 18/437 (4%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLD----LYVATALVDMYVKFGVLGSARKVFDEM 197
L+K + + R G VH VK LD ++A L++MY K SAR V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA--------AFNVMIDGYVKLGCM 249
R+ VSWT++I G + G S A F M V AF + + +
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
+ R +V S YC+ + AR +FD +PE+NL TWNA I +
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
+P EA++ F E PN +T + L A +D L+LG + G R D V V
Sbjct: 189 RPREAIEAFIE-FRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 247
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
LID Y KC +I + ++F EM K SW +L+ + N ++A ++ ++
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 307
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
++ + VLSAC ++ GR + I +VD+ G+ GC++++E
Sbjct: 308 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 490 IQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRW 549
MP + N + +S + H V A + E +Y+ +L + R
Sbjct: 368 FDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 550 TDVED-VKHMMKMRGSY 565
VE+ +K MR +Y
Sbjct: 427 GAVENGMKIFDSMRSTY 443
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 238/479 (49%), Gaps = 37/479 (7%)
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER---------- 200
+T +GL++HG VK+G L VA L++ Y K + +R+ F++ ++
Sbjct: 30 STIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIIS 89
Query: 201 ----SRVSWTAV------IVGYTRCGD--MSEARKLFDVMPERDVAAFNVMIDGYVKLGC 248
+ + W ++ + G R D + A K ++ D+ + C
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGR---------SVHC 140
Query: 249 MDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKN 308
+ M D +V +S+V Y + G++ AR MFD MP++N+ TW+ M+ G+ +
Sbjct: 141 LSMKTGY-----DADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 195
Query: 309 KQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRV 368
+ EAL LF+E L ++ N+ + SV+ A+ L+LG I G + + D S V
Sbjct: 196 GENEEALWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFV 254
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
++L+ +Y+KCG A +F E+P K WNA++ +A + ++ +E+F+ M G
Sbjct: 255 GSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGM 314
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
+PN IT + VL+AC+H GLVDEGR F M+ I P +HY +VD+LGRAG L EA
Sbjct: 315 KPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALE 374
Query: 489 LIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKR 548
+I MP D + + L +C K+ A + ++ +G ++ L N YA + R
Sbjct: 375 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 434
Query: 549 WTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQLWKHMK 607
+ D + +++ RG KE S +E + F AG+ H + I L +L + M+
Sbjct: 435 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEME 493
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+ M +P H + K C G VH +++K G+ D++V ++LVDMY K
Sbjct: 105 KKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC 164
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMI 240
G + ARK+FDEM +R+ V+W+ ++ GY + G+ EA LF ++A +F+ +I
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 241 DGYVKLGCMDMAQDLF----DKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
+++ + + D + +S+VS Y + G E A +F+ +P KNL
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
WNAM+ + ++ + ++LF+ M +S ++PN +T L+VL A + G +D G +
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFITFLNVLNACSHAGLVDEGRYYFDQ 343
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKE 415
+ +++ + + +L+DM + G + A + MP T S W AL+ V+ +
Sbjct: 344 MKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTEL 403
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
A F +++ +G +S+ H L +
Sbjct: 404 A----------AFAADKVFELGPVSSGMHISLSN 427
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 193/328 (58%), Gaps = 14/328 (4%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEK-NLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
TS+V Y GDV+ AR +FD PEK N+ W AMI + +N+ EA++LF+ M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEK 162
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWI--QGFARRKKLDGSVRVSTALIDMYAKCGEIGR 384
+E + V + L A ADLGA+ +G I + R+++L + + +L++MY K GE +
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 385 ARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM--IREG----FRPNEITMIGV 438
AR LF+E K+ ++ ++I G+A+NG+A+E+LE+F+ M I + PN++T IGV
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 439 LSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
L AC+H GLV+EG+R FK+M + + P+ H+GCMVDL R+G L +A I MP
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 498 NGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKH 557
N +I + L AC +V E V R +++++ GDYV L N+YA++ W + ++
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402
Query: 558 MMKMRGSYKEVACSVIEVDGRFREFVAG 585
++ R + S IE+ EFV+G
Sbjct: 403 RVRKR---RMPGKSWIELGSIINEFVSG 427
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 39/373 (10%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMT------- 128
I+RH +K D FL HF + TL + L G + +
Sbjct: 4 ILRHLHSL-GVINKFDSFLL------HFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFR 56
Query: 129 MTPFKPGGHTFTALVKGCTACMATR-EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVL 187
+P + +K +A A+ +G ++H + K GF + + T+LV Y G +
Sbjct: 57 QSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDV 116
Query: 188 GSARKVFDEMSERSR-VSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDG 242
AR+VFDE E+ V WTA+I YT + EA +LF M E D V +
Sbjct: 117 DYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSA 176
Query: 243 YVKLGCMDMAQDLFDK-MRDKNVISW-----TSMVSGYCQNGDVESARLMFDLMPEKNLF 296
LG + M ++++ + ++ K ++ S+++ Y ++G+ E AR +FD K++
Sbjct: 177 CADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVT 236
Query: 297 TWNAMIGGHCKNKQPHEALKLFREML-----MSASVEPNEVTLLSVLPAVADLGALDLGG 351
T+ +MI G+ N Q E+L+LF++M + PN+VT + VL A + G ++ G
Sbjct: 237 TYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEG- 295
Query: 352 WIQGFARRKKLDGSVRVSTA----LIDMYAKCGEIGRARLLFEEMPEK-ETASWNALING 406
+ + +D +++ A ++D++ + G + A +MP K T W L+
Sbjct: 296 --KRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
Query: 407 FAVNGRAKEALEV 419
+++G + EV
Sbjct: 354 CSLHGNVELGEEV 366
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 148/351 (42%), Gaps = 54/351 (15%)
Query: 73 AVSIVRHARRFFDAT-HKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTP 131
+V V +AR+ FD T K++ L +MI+ + E LF+ M
Sbjct: 112 SVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFK---------RMEAEK 162
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNG--FCLDLYVATALVDMYVKFGVLGS 189
+ G T + C A + G E++ ++K +DL + +L++MYVK G
Sbjct: 163 IELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCM 249
ARK+FDE + ++T++I GY G E+ +LF K+ +
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK------------------KMKTI 264
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMF-------DLMPEKNLFTWNAMI 302
D +Q D + N +++ ++ +G VE + F +L P + F M+
Sbjct: 265 DQSQ---DTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF--GCMV 319
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
C++ +A + +M ++PN V ++L A + G ++LG +Q R +L
Sbjct: 320 DLFCRSGHLKDAHEFINQM----PIKPNTVIWRTLLGACSLHGNVELGEEVQ--RRIFEL 373
Query: 363 D-GSVRVSTALIDMYAKCG-----EIGRARLLFEEMPEKETASWNALINGF 407
D V AL ++YA G R R+ MP K ++IN F
Sbjct: 374 DRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEF 424
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 153/570 (26%), Positives = 260/570 (45%), Gaps = 71/570 (12%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLC 95
QIH ++ D ++N++ + A +R + A F+ +
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQ-----CKR------ISEAEYLFETMEGEKNNVT 194
Query: 96 NSMITTHFAIRQFS-EPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATRE 154
+ + T ++ F+ + FRDL R + +TF +++ C + A R
Sbjct: 195 WTSMLTGYSQNGFAFKAIECFRDLRREGN---------QSNQYTFPSVLTACASVSACRV 245
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G++VH VK+GF ++YV +AL+DMY K + SAR + + M VSW ++IVG R
Sbjct: 246 GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 215 CGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGC-------MDMAQDLFDKMRDKNVISW 267
G + EA +F M ERD+ + I L C M +A + ++
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSI--LNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 268 ----TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM 323
++V Y + G ++SA +F+ M EK++ +W A++ G+ N EALKLF M +
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRV 423
Query: 324 SASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIG 383
+ P+++ SVL A A+L L+ G + G + S+ V+ +L+ MY KCG +
Sbjct: 424 GG-ITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 384 RARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACN 443
A ++F M ++ +W LI G+A NG
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNG-------------------------------- 510
Query: 444 HCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIIL 502
L+++ +R F +M +GI P EHY CM+DL GR+G + E L+ M + + +
Sbjct: 511 ---LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVW 567
Query: 503 SSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
+ L A ++ ER + +++E A YV L N+Y+ R + +V+ +MK R
Sbjct: 568 KAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSR 627
Query: 563 GSYKEVACSVIEVDGRFREFVAGDYLHSNL 592
KE CS +E G+ F++ D H +
Sbjct: 628 NISKEPGCSWVEEKGKVHSFMSEDRRHPRM 657
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 131/261 (50%), Gaps = 2/261 (0%)
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
N+++ K G +D A+ +FDKM +++ +W +M+ Y + + A +F P KN
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WNA+I G+CK+ EA LF EM S ++PNE TL SVL L L G I G
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH 150
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGRAKE 415
+ D V V L+ MYA+C I A LFE M EK +W +++ G++ NG A +
Sbjct: 151 TIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFK 210
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
A+E F + REG + N+ T VL+AC G + + G I ++D
Sbjct: 211 AIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALID 270
Query: 476 LLGRAGCLDEAENLIQTMPFD 496
+ + ++ A L++ M D
Sbjct: 271 MYAKCREMESARALLEGMEVD 291
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 162/365 (44%), Gaps = 68/365 (18%)
Query: 183 KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDG 242
K G + AR++FD+M ER +W +IV Y+ +S+A KLF P ++ ++N +I G
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 243 YVKLGCMDMAQDLFDKMR-----------------------------------------D 261
Y K G A +LF +M+ D
Sbjct: 100 YCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD 159
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGGHCKNKQPHEALKLFRE 320
NV++ +++ Y Q + A +F+ M EKN TW +M+ G+ +N +A++ FR+
Sbjct: 160 VNVVN--GLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
+ + + N+ T SVL A A + A +G + + ++ V +ALIDMYAKC
Sbjct: 218 LRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCR 276
Query: 381 EIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL- 439
E+ AR L E M + SWN++I G G EAL +F M + ++ T+ +L
Sbjct: 277 EMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN 336
Query: 440 -----------SACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
++ HC +V G +K + +VD+ + G +D A
Sbjct: 337 CFALSRTEMKIASSAHCLIVKTGYATYKLVN-----------NALVDMYAKRGIMDSALK 385
Query: 489 LIQTM 493
+ + M
Sbjct: 386 VFEGM 390
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 76/189 (40%), Gaps = 36/189 (19%)
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE-------------- 394
G I +A R KL S L+ +K G + AR +F++MPE
Sbjct: 16 FGSCIHSYADRTKLH-----SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 395 -----------------KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
K T SWNALI+G+ +G EA +F M +G +PNE T+
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
VL C L+ G + G + ++ + + + EAE L +TM +
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 498 NGIILSSFL 506
N + +S L
Sbjct: 191 NNVTWTSML 199
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 32/439 (7%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
G +VHG +K+G LDL V ++L +Y K G L + K+F + + W ++I G+
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 215 CGDMSEARKLFDVM-------PERDVAAFNVM------------IDGYVKLGCMDMAQDL 255
G + EA LF M E +AA + I GY +D DL
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
+++V+ Y + G ++ AR ++D +PE + + +++I G+ ++ +
Sbjct: 589 -----------GSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGF 637
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
LFR+M+MS + + S+L A A LG + + + L V ++L+ M
Sbjct: 638 LLFRDMVMSG-FTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTM 696
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
Y+K G I F ++ + +W ALI +A +G+A EAL+V+ +M +GF+P+++T
Sbjct: 697 YSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTF 756
Query: 436 IGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+GVLSAC+H GLV+E +M + +GI P+ HY CMVD LGR+G L EAE+ I M
Sbjct: 757 VGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMH 816
Query: 495 FDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVED 554
+ ++ + L AC +V + ++ +++E AG Y+ L N+ A W +VE+
Sbjct: 817 IKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEE 876
Query: 555 VKHMMKMRGSYKEVACSVI 573
+ +MK G KE S +
Sbjct: 877 TRKLMKGTGVQKEPGWSSV 895
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 202/432 (46%), Gaps = 39/432 (9%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + F + + + N++I + + F LF ++C G KP +T+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ---------KPDSYTY 254
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
++++ C + R G V +K G D++V TA+VD+Y K G + A +VF +
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL-GCMDMAQDLFDK 258
S VSWT ++ GYT+ D A ++F M V N + + G M +
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA--- 370
Query: 259 MRDKNVISWT-------------SMVSGYCQNGDVESARLMF---DLMPEKNLFTWNAMI 302
V +W +++S Y ++GD++ + +F D + +N+ N MI
Sbjct: 371 ---SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMI 425
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL 362
++K+P +A++LF ML + +E ++ S+L L L+LG + G+ + L
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGL 481
Query: 363 DGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
+ V ++L +Y+KCG + + LF+ +P K+ A W ++I+GF G +EA+ +F
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 423 MIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGC 482
M+ +G P+E T+ VL+ C+ + G+ GI ++ +V++ + G
Sbjct: 542 MLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGS 601
Query: 483 LDEAENLIQTMP 494
L A + +P
Sbjct: 602 LKLARQVYDRLP 613
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 153/344 (44%), Gaps = 57/344 (16%)
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
FD +S +SW Y+ G M++A KLFD +P+ DV + N+MI GY + + +
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 254 DLFDKMR----DKNVISWTSMVSG-----------------------------------Y 274
F KM + N IS+ S++S +
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVF 195
Query: 275 CQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
+N E A +F N++ WN +I G +N+ LF EM + +P+ T
Sbjct: 196 SKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTY 254
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDG-SVRVSTALIDMYAKCGEIGRARLLFEEMP 393
SVL A A L L G +Q AR K V V TA++D+YAKCG + A +F +P
Sbjct: 255 SSVLAACASLEKLRFGKVVQ--ARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
SW +++G+ + A ALE+F+ M G N T+ V+SAC +V E +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 454 ----CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
FK+ GF + + ++ + ++G +D +E + + +
Sbjct: 373 VHAWVFKS--GFYLDSSVA--AALISMYSKSGDIDLSEQVFEDL 412
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 184/463 (39%), Gaps = 91/463 (19%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + FD + D CN MI+ + R F E F M F+ ++
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSK---------MHFLGFEANEISY 153
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+++ C+A A V +K G+ V +AL+D++ K A KVF +
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS 213
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVM------PE----------------------- 230
+ W +I G R + LF M P+
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVV 273
Query: 231 ---------RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVE 281
DV ++D Y K G M A ++F ++ + +V+SWT M+SGY ++ D
Sbjct: 274 QARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 282 SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
S AL++F+EM S VE N T+ SV+ A
Sbjct: 334 S-------------------------------ALEIFKEMRHSG-VEINNCTVTSVISAC 361
Query: 342 ADLG----ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
A + W+ F LD S V+ ALI MY+K G+I + +FE++ + +
Sbjct: 362 GRPSMVCEASQVHAWV--FKSGFYLDSS--VAAALISMYSKSGDIDLSEQVFEDLDDIQR 417
Query: 398 ASW-NALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
+ N +I F+ + + +A+ +F M++EG R +E ++ +LS + L G++
Sbjct: 418 QNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL---GKQVHG 474
Query: 457 AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG 499
G+ + + L + G L+E+ L Q +PF N
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 33/230 (14%)
Query: 5 SPPQRTLWSTAERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNL---LAKFITTCA 61
SP + TL + L C S ++ +IH + LR +D ++L L + C
Sbjct: 548 SPDESTLAAV-------LTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 62 SIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRG 121
S+ + AR+ +D + D C+S+I+ + + F LFRD
Sbjct: 601 SLKL--------------ARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRD---- 642
Query: 122 TATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMY 181
M M+ F ++++K + G +VH K G C + V ++L+ MY
Sbjct: 643 -----MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMY 697
Query: 182 VKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER 231
KFG + K F +++ ++WTA+I Y + G +EA +++++M E+
Sbjct: 698 SKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEK 747
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/458 (20%), Positives = 190/458 (41%), Gaps = 72/458 (15%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFIT---TCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
Q+H + L++ + +L + + T C S+ + + F +D
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSL--------------EESYKLFQGIPFKDN 516
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCR-GTATRTMTMTPFKPGGHTFTALVKGCTACMA 151
SMI+ E LF ++ GT+ P T A++ C++ +
Sbjct: 517 ACWASMISGFNEYGYLREAIGLFSEMLDDGTS----------PDESTLAAVLTVCSSHPS 566
Query: 152 TREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG 211
G E+HG ++ G + + +ALV+MY K G L AR+V+D + E VS +++I G
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW---- 267
Y++ G + + LF RD+ +D + + A + V ++
Sbjct: 627 YSQHGLIQDGFLLF-----RDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKI 681
Query: 268 ---------TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLF 318
+S+++ Y + G ++ F + +L W A+I + ++ + +EAL+++
Sbjct: 682 GLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVY 741
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGW-IQGFARRKKLDGSVRVSTALIDMYA 377
++ +P++VT + VL A + G ++ + + + ++ R ++D
Sbjct: 742 N-LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALG 800
Query: 378 KCGEIGRARLLFEEMPEKETA-SWNALINGFAVNGR-------AKEALEVFEMMIREGFR 429
+ G + A M K A W L+ ++G AK+A+E+
Sbjct: 801 RSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIEL---------E 851
Query: 430 PNE----ITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
P++ I++ +L+ V+E R K M+G G+
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETR---KLMKGTGV 886
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEAL 417
RR L V ++ +L+ Y+ G + A LF+ +P+ + S N +I+G+ + +E+L
Sbjct: 76 RRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 418 EVFEMMIREGFRPNEITMIGVLSACN 443
F M GF NEI+ V+SAC+
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISACS 161
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 190/337 (56%), Gaps = 8/337 (2%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
T+++ Y +NGD+ SA +FD MP +++ +WNA+I G + EA++L++ M + +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGI 206
Query: 328 EPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+EVT+++ L A + LG + G I G++ + +V VS A IDMY+KCG + +A
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAY 261
Query: 387 LLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+FE+ +K +WN +I GFAV+G A ALE+F+ + G +P++++ + L+AC H
Sbjct: 262 QVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHA 321
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
GLV+ G F M G+ ++HYGC+VDLL RAG L EA ++I +M + ++ S
Sbjct: 322 GLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 506 LFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY 565
L A + DV AE RE +M GD+VLL N+YA + RW DV V+ M+ +
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 566 KEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
K S IE G EF D H I + ++
Sbjct: 442 KIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 7/273 (2%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T + +K C + + ++H + G D + T L+D Y K G L SA K+FDEM
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV----KLGCMDMAQ 253
R SW A+I G SEA +L+ M + V + + LG + +
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 254 DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFD-LMPEKNLFTWNAMIGGHCKNKQPH 312
++F + NVI + + Y + G V+ A +F+ +K++ TWN MI G + + H
Sbjct: 231 NIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAH 290
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
AL++F + L ++P++V+ L+ L A G ++ G + K ++ +++ +
Sbjct: 291 RALEIF-DKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCV 349
Query: 373 IDMYAKCGEIGRARLLFEEMPE-KETASWNALI 404
+D+ ++ G + A + M + W +L+
Sbjct: 350 VDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 245/543 (45%), Gaps = 87/543 (16%)
Query: 29 KTITTLLQIHA-FMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFF 84
+T+ L Q HA F+ + N+ ++ A + SI+ S S E VS RF
Sbjct: 15 RTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFI 74
Query: 85 DATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATR---TMTMTPFKPGGHTFTA 141
F N++I I EP +L ++ R M P HTF
Sbjct: 75 T---NPSTFCFNTIIR----ICTLHEPSSL-------SSKRFFVEMRRRSVPPDFHTFPF 120
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+ K C A KNG DL + L ++FG+L
Sbjct: 121 VFKACAA--------------KKNG---DLTLVKTLHCQALRFGLLS------------- 150
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
D+ N +I Y + +D A LFD+
Sbjct: 151 ------------------------------DLFTLNTLIRVYSLIAPIDSALQLFDENPQ 180
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREM 321
++V+++ ++ G + ++ AR +FD MP ++L +WN++I G+ + EA+KLF EM
Sbjct: 181 RDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEM 240
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
+ + ++P+ V ++S L A A G G I + +RK+L ++T L+D YAKCG
Sbjct: 241 V-ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
I A +FE +K +WNA+I G A++G + ++ F M+ G +P+ +T I VL
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVG 359
Query: 442 CNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG- 499
C+H GLVDE R F M + + +++HYGCM DLLGRAG ++EA +I+ MP D
Sbjct: 360 CSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNR 419
Query: 500 ---IILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVK 556
+ S L C ++ AE+ + E G Y ++ +YA +RW +V V+
Sbjct: 420 EKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Query: 557 HMM 559
++
Sbjct: 480 EII 482
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 250/511 (48%), Gaps = 43/511 (8%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A + F RD ++MI ++ Q E +LFRD+ R KP T
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR---------IHIKPNAVTL 404
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
T++++GC A+R G +H A+K +L ATA++ MY K G A K F+ +
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLG-------CMDMA 252
+ V++ A+ GYT+ GD A K FDV +++ V D +G C D A
Sbjct: 465 KDAVAFNALAQGYTQIGD---ANKAFDVY--KNMKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 253 Q------DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWNAMIGGH 305
+ + D ++++ + + + +A ++FD EK+ +WN M+ G+
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
+ Q EA+ FR+M + +PN VT ++++ A A+L AL +G + +
Sbjct: 580 LLHGQAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
V +L+DMYAKCG I + F E+ K SWN +++ +A +G A A+ +F M
Sbjct: 639 TPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQE 698
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLD 484
+P+ ++ + VLSAC H GLV+EG+R F+ M E I ++EHY CMVDLLG+AG
Sbjct: 699 NELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFG 758
Query: 485 EAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYA 544
EA +++ M + + + L + ++ + L + VK+E L + Y+
Sbjct: 759 EAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYS 811
Query: 545 TEKRWTDVEDVKHMMKMRGSYKEVACSVIEV 575
++R +V +V + K+ ACS IEV
Sbjct: 812 QDRRLGEVNNVSRIKKVP------ACSWIEV 836
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 197/429 (45%), Gaps = 20/429 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
AR+ FD H +D N+M++ S LF D+ R ++ +
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM-RSCCVDIDHVSLYN------ 206
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
L+ + + +HG+ +K GF ++ L+DMY L +A VF+E+
Sbjct: 207 --LIPAVSKLEKSDVCRCLHGLVIKKGFIFAF--SSGLIDMYCNCADLYAAESVFEEVWR 262
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMDMAQDL 255
+ SW ++ Y G E +LFD+M DV V ++ +G + +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 256 FDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQP 311
D + +I TS++S Y + G++E A +F + ++++ +W+AMI + + Q
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
EA+ LFR+M M ++PN VTL SVL A + A LG I +A + ++ + +TA
Sbjct: 383 DEAISLFRDM-MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATA 441
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
+I MYAKCG A FE +P K+ ++NAL G+ G A +A +V++ M G P+
Sbjct: 442 VISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPD 501
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
TM+G+L C C G + + G + ++++ + L A L
Sbjct: 502 SRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD 561
Query: 492 TMPFDANGI 500
F+ + +
Sbjct: 562 KCGFEKSTV 570
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 214/453 (47%), Gaps = 34/453 (7%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
LL + K LLQ+H ++ + + + L+ A S +R + +R
Sbjct: 9 LLMLRECKNFRCLLQVHGSLIVSGLKPHNQLIN---------AYSLFQRQDL------SR 53
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
FD+ L NSMI + E F G + + P K ++FT
Sbjct: 54 VIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFF-----GYMSEEKGIDPDK---YSFTF 105
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+K C M ++GL +H + + G D+Y+ TALV+MY K L SAR+VFD+M +
Sbjct: 106 ALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKD 165
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
V+W ++ G + G S A LF M + D + +I KL D+ + L
Sbjct: 166 VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG 225
Query: 258 KMRDKNVI-SWTS-MVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
+ K I +++S ++ YC D+ +A +F+ + K+ +W M+ + N E L
Sbjct: 226 LVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVL 285
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
+LF +++ + V N+V S L A A +G L G I +A ++ L G V V+T+L+ M
Sbjct: 286 ELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSM 344
Query: 376 YAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
Y+KCGE+ A LF + +++ SW+A+I + G+ EA+ +F M+R +PN +T+
Sbjct: 345 YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTL 404
Query: 436 IGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
VL C R K++ + I IE
Sbjct: 405 TSVLQGCAGVA----ASRLGKSIHCYAIKADIE 433
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 199/384 (51%), Gaps = 43/384 (11%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCG 216
++H +K+ D + L+ + FG A VF+++ S +W +I +
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 217 DMSEARKLFDVMPERDVAAF---------------------------------------- 236
EA LF +M + F
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
N ++D Y K G D + +FDKM ++++SWT+M+ G N ++SA ++F+ MP +N+
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+W AMI + KN++P EA +LFR M + V+PNE T++++L A LG+L +G W+ +
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
A + + TALIDMY+KCG + AR +F+ M K A+WN++I V+G +EA
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 417 LEVFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMV 474
L +FE M E P+ IT +GVLSAC + G V +G R F M + +GI+P EH CM+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMI 396
Query: 475 DLLGRAGCLDEAENLIQTMPFDAN 498
LL +A +++A NL+++M D +
Sbjct: 397 QLLEQALEVEKASNLVESMDSDPD 420
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 189/421 (44%), Gaps = 66/421 (15%)
Query: 31 ITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKR 90
+ L QIH ++++++ N+ L+ + I+ +S + ++A F+
Sbjct: 33 FSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGET-----------QYASLVFNQLQSP 81
Query: 91 DEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACM 150
F N MI + + E LF M + TF ++K C A
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLF--------ILMMISHQSQFDKFTFPFVIKACLASS 133
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIV 210
+ R G +VHG+A+K GF D++ L+D+Y K G S RKVFD+M RS VSWT ++
Sbjct: 134 SIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLY 193
Query: 211 GYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVIS---- 266
G + A +F+ MP R+V ++ MI YVK D A LF +M+ +V
Sbjct: 194 GLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFT 253
Query: 267 ------------------W-----------------TSMVSGYCQNGDVESARLMFDLMP 291
W T+++ Y + G ++ AR +FD+M
Sbjct: 254 IVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
K+L TWN+MI + EAL LF EM ASVEP+ +T + VL A A+ G + G
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG- 372
Query: 352 WIQGFARRKKLDG--SVRVSTA-LIDMYAKCGEIGRARLLFEEM---PEKETASWNALIN 405
++ F R ++ G +R A +I + + E+ +A L E M P+ ++ N +
Sbjct: 373 -LRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNSSFGNEYTD 431
Query: 406 G 406
G
Sbjct: 432 G 432
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 238/478 (49%), Gaps = 22/478 (4%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF------GVLGSARKVFD 195
+V+ C + ++ ++H + NG L ++ + ++F G L A+ +FD
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIING----LQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 196 EM-SERSRVSWTAVIVGYTRCGDMSEA-----RKLFDVMPERDVAAFNVMIDGYVKLG-- 247
S+ S W +I G++ + R L + D+ FN + ++
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 248 --CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
C+++ + + I TS+V Y NG VE A +FD MP ++L +WN MI
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
++AL +++ M + V + TL+++L + A + AL++G + A + +
Sbjct: 184 SHVGLHNQALSMYKRM-GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESC 242
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
V VS ALIDMYAKCG + A +F M +++ +WN++I G+ V+G EA+ F M+
Sbjct: 243 VFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVA 302
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLD 484
G RPN IT +G+L C+H GLV EG F+ M F + P ++HYGCMVDL GRAG L+
Sbjct: 303 SGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 485 EAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYA 544
+ +I + ++ + L +C +++ E +++ V++E AGDYVL+ ++Y+
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYS 422
Query: 545 TEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQL 602
++ +++ S IE+ + +FV D +H VI LG++
Sbjct: 423 AANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 195/474 (41%), Gaps = 101/474 (21%)
Query: 17 RKCLDLLQ-CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVS 75
R + +LQ C S K L +IH+ ++ N + ++ ++ + CA ++V+ S
Sbjct: 6 RVIVRMLQGCNSMKK---LRKIHSHVIINGLQHHPSIFNHLLRFCA-VSVTGS------- 54
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+ HA+ FD S ++ IR FS + + R + + +P
Sbjct: 55 -LSHAQLLFDHFDSDP-----STSDWNYLIRGFSNSSSPLNSIL--FYNRMLLSSVSRPD 106
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
TF +K C + + LE+HG +++GF D VAT+LV Y G + A KVFD
Sbjct: 107 LFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFD 166
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLF------------------------------ 225
EM R VSW +I ++ G ++A ++
Sbjct: 167 EMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 226 ---------DVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQ 276
D+ E V N +ID Y K G ++ A +F+ MR ++V++W SM+ GY
Sbjct: 227 GVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGV 286
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
+G EA+ FR+M+ S V PN +T L
Sbjct: 287 HG-------------------------------HGVEAISFFRKMVASG-VRPNAITFLG 314
Query: 337 VLPAVADLGALDLGGWIQGF---ARRKKLDGSVRVSTALIDMYAKCGEIGRA-RLLFEEM 392
+L + G + G ++ F + + L +V+ ++D+Y + G++ + +++
Sbjct: 315 LLLGCSHQGLVKEG--VEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 393 PEKETASWNALINGFAVNGRAKEALEVF--EMMIREGFRPNE-ITMIGVLSACN 443
++ W L+ ++ R E EV +++ E F + + M + SA N
Sbjct: 373 CHEDPVLWRTLLGSCKIH-RNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 425
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 223/449 (49%), Gaps = 26/449 (5%)
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVF--DEMSER 200
+K C+ G ++H VK+G + +AL+DMY G L A VF ++++
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 201 SRVS-WTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
S V+ W +++ G+ + A L + + D+ + + G +K+ C++ + +
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKI-CIN-----YVNL 358
Query: 260 RDKNVISWTSMVSGY--------------CQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
R + +VSGY G+++ A +F +P K++ ++ +I G
Sbjct: 359 RLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGC 418
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
K+ A LFRE L+ ++ ++ + ++L + L +L G I G +K +
Sbjct: 419 VKSGFNSLAFYLFRE-LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR 425
+TAL+DMY KCGEI +LF+ M E++ SW +I GF NGR +EA F MI
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLD 484
G PN++T +G+LSAC H GL++E R + M+ +G+ P +EHY C+VDLLG+AG
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 485 EAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYA 544
EA LI MP + + I +S L ACG K+ + + +K + Y L N YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 545 TEKRWTDVEDVKHMMKMRGSYKEVACSVI 573
T W + V+ K G+ KE S I
Sbjct: 658 TLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 185/433 (42%), Gaps = 46/433 (10%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
A ++ C A + G + +K G ++++A ++ MYV F +L A KVFDEMS
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER--------------------------- 231
ER+ V+WT ++ GYT G ++A +L+ M +
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 232 -------------DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
DV N ++D YVK G + A F ++ + SW +++SGYC+ G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
++ A +F MP+ N+ +WN +I G P AL+ M V + L L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLV-LDGFALPCGL 245
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE---MPEK 395
A + G L +G + + L+ S +ALIDMY+ CG + A +F +
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNS 305
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
A WN++++GF +N + AL + + + + T+ G L C + + G +
Sbjct: 306 SVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVH 365
Query: 456 KAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDV 515
+ G +VDL G + +A L +P + + I S + C
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFN 424
Query: 516 SRAERVLRETVKM 528
S A + RE +K+
Sbjct: 425 SLAFYLFRELIKL 437
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 202/513 (39%), Gaps = 80/513 (15%)
Query: 49 NLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQF 108
+L L+A + C V +R E SI H + ++ F+ N++I+ + R
Sbjct: 4 DLKLIAAGLRHCGK--VQAFKRGE--SIQAHVIK---QGISQNVFIANNVISMYVDFRLL 56
Query: 109 SEPFTLFRDLC-RGTATRTMTMTPFKPGGHT----------------------FTALVKG 145
S+ +F ++ R T T ++ + G ++A++K
Sbjct: 57 SDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKA 116
Query: 146 CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSW 205
C + G+ V+ K D+ + ++VDMYVK G L A F E+ S SW
Sbjct: 117 CGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSW 176
Query: 206 TAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVI 265
+I GY + G M EA LF MP+ +V ++N +I G+V G + L R+ V+
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 266 --------------------------------------SWTSMVSGYCQNGDVESARLMF 287
+ ++++ Y G + A +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 288 ---DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
L ++ WN+M+ G N++ AL L ++ S + + TL L +
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS-DLCFDSYTLSGALKICINY 355
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
L LG + + V + L+D++A G I A LF +P K+ +++ LI
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLI 415
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR----CFKAMEG 460
G +G A +F +I+ G ++ + +L C+ + G++ C K +G
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIK--KG 473
Query: 461 FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ P +VD+ + G +D L M
Sbjct: 474 YESEPVTAT--ALVDMYVKCGEIDNGVVLFDGM 504
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+T + +K C + R GL+VH + V +G+ LD V + LVD++ G + A K+F
Sbjct: 343 YTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR 402
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
+ + ++++ +I G + G S A LF + + + A ++ +K+ C +A +
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKV-CSSLASLGW 461
Query: 257 DKM---------RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCK 307
K + ++ T++V Y + G++++ ++FD M E+++ +W +I G +
Sbjct: 462 GKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 308 NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSV 366
N + EA + F +M+ + +EPN+VT L +L A G L+ ++ L+ +
Sbjct: 522 NGRVEEAFRYFHKMI-NIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYL 580
Query: 367 RVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALINGFAVNGRAKEALEVFEMMIR 425
++D+ + G A L +MP E + W +L+ + A + E +++
Sbjct: 581 EHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK 640
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG 462
GF + + +A G+ D+ + +A + G
Sbjct: 641 -GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG 676
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 239/469 (50%), Gaps = 21/469 (4%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV--LGS 189
FK H +K C++ + L++HG + D ++ + LV + L
Sbjct: 9 FKSRKHQCLIFLKLCSS---IKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAF 65
Query: 190 ARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK---- 245
AR + S+ + +W + GY+ E+ ++ M R + + +K
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 246 -LGCMDMAQDLFDKMR---DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
LG Q + ++ D +V +++ Y AR +FD M E+N+ +WN++
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
+ +N + + + F EM+ P+E T++ +L A G L LG + ++
Sbjct: 186 MTALVENGKLNLVFECFCEMI-GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE 242
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFE 421
L+ + R+ TAL+DMYAK G + ARL+FE M +K +W+A+I G A G A+EAL++F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 422 MMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF-GIAPQIEHYGCMVDLLGR 479
M++E RPN +T +GVL AC+H GLVD+G + F ME I P + HYG MVD+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 480 AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR---AERVLRETVKMEKECAGDY 536
AG L+EA + I+ MPF+ + ++ + L AC D E+V + +++E + +G+
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNL 422
Query: 537 VLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
V++ N +A + W + +V+ +MK K S +E+ G F F +G
Sbjct: 423 VIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 46/305 (15%)
Query: 35 LQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRH--------------- 79
+ +++ M R + N + CAS T+ R V +++H
Sbjct: 98 IWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHL 157
Query: 80 ---------ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMT 130
AR+ FD +R+ NS++T A+ + + +F C R
Sbjct: 158 YGTCKKTSDARKVFDEMTERNVVSWNSIMT---ALVENGKLNLVFECFCEMIGKR----- 209
Query: 131 PFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSA 190
F P T L+ C ++ G VH + L+ + TALVDMY K G L A
Sbjct: 210 -FCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYA 266
Query: 191 RKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD-VMPERDVAAFNVMIDGYV----K 245
R VF+ M +++ +W+A+IVG + G EA +LF +M E V V G +
Sbjct: 267 RLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSH 326
Query: 246 LGCMDMAQDLFDKMRDKN-----VISWTSMVSGYCQNGDVESARLMFDLMP-EKNLFTWN 299
G +D F +M + +I + +MV + G + A MP E + W
Sbjct: 327 TGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWR 386
Query: 300 AMIGG 304
++
Sbjct: 387 TLLSA 391
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 219/423 (51%), Gaps = 17/423 (4%)
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD 232
++TALVDMY+KF +A VFD+M ++ VSWTA+I G + LF M +
Sbjct: 187 LSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN 246
Query: 233 VAAFNVMIDGYVKLGCMDM--AQDLFDKMR----------DKNVISWTSMVSGYCQNGDV 280
+ V + + C+++ L ++ D+ + + + ++ YC+ G+V
Sbjct: 247 LRPNRVTLLSVLP-ACVELNYGSSLVKEIHGFSFRHGCHADERLTA--AFMTMYCRCGNV 303
Query: 281 ESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
+R++F+ +++ W++MI G+ + E + L +M +E N VTLL+++ A
Sbjct: 304 SLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM-RKEGIEANSVTLLAIVSA 362
Query: 341 VADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASW 400
+ L + + + + ALIDMYAKCG + AR +F E+ EK+ SW
Sbjct: 363 CTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSW 422
Query: 401 NALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG 460
+++IN + ++G EALE+F+ MI+ G +++ + +LSACNH GLV+E + F
Sbjct: 423 SSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK 482
Query: 461 FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAER 520
+ + +EHY C ++LLGR G +D+A + MP + I SS L AC + A +
Sbjct: 483 YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGK 542
Query: 521 VL-RETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRF 579
++ E +K E + +YVLL ++ + E+V+ +M+ R K S IE + +
Sbjct: 543 IIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQI 602
Query: 580 REF 582
++
Sbjct: 603 EDY 605
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 220/488 (45%), Gaps = 27/488 (5%)
Query: 114 LFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCT-ACMATRE----GLEVHGVAVKNGFC 168
L D A R + G + FTA++ AC +E G ++H + +K G
Sbjct: 20 LVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGAD 79
Query: 169 LDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKL---- 224
D V+ +L+ MY KF + RKVFDEM R VS+ ++I + G + EA KL
Sbjct: 80 CDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM 139
Query: 225 --FDVMPERDVA----AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNG 278
+ +P+ ++ A + K+ M A L D+ ++V+ T++V Y +
Sbjct: 140 YFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFD 199
Query: 279 DVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
D +A +FD M KN +W AMI G N+ + LFR M ++ PN VTLLSVL
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAM-QRENLRPNRVTLLSVL 258
Query: 339 PAVADLG-ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
PA +L L I GF+ R R++ A + MY +CG + +R+LFE ++
Sbjct: 259 PACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 398 ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKA 457
W+++I+G+A G E + + M +EG N +T++ ++SAC + L+
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 458 MEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSR 517
+ G I ++D+ + G L A + + + + + SS + A G S
Sbjct: 379 ILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGHGSE 437
Query: 518 AERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSY------KEVACS 571
A + + +K E D L L A VE+ + + G Y + AC
Sbjct: 438 ALEIFKGMIKGGHE-VDDMAFLAILSACNHAGL-VEEAQTIFTQAGKYHMPVTLEHYAC- 494
Query: 572 VIEVDGRF 579
I + GRF
Sbjct: 495 YINLLGRF 502
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 36 QIHAFMLRNSVDNNLNLLAKFITT---CASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
+IH F R+ + L A F+T C ++++S R F+ + RD
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLS--------------RVLFETSKVRDV 318
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMAT 152
+ +SMI+ + SE L M + T A+V CT
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQ---------MRKEGIEANSVTLLAIVSACTNSTLL 369
Query: 153 REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGY 212
VH +K GF + + AL+DMY K G L +AR+VF E++E+ VSW+++I Y
Sbjct: 370 SFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAY 429
Query: 213 TRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDK 258
G SEA ++F M E D AF ++ G ++ AQ +F +
Sbjct: 430 GLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 254/548 (46%), Gaps = 64/548 (11%)
Query: 36 QIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
Q+H ++ ++ +N N L +F T S+ A + FD D
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSL--------------EDAHKVFDEMPDPDV 121
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMAT 152
NS+++ + +F E LF +L R P +FTA + C +
Sbjct: 122 ISWNSLVSGYVQSGRFQEGICLFLELHRSDVF---------PNEFSFTAALAACARLHLS 172
Query: 153 REGLEVHGVAVKNGFCL-DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG 211
G +H VK G ++ V L+DMY K G + A VF M E+ VSW A++
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMV 271
+R G + F MP D +N +ID +VK G + A + M + N SW +++
Sbjct: 233 CSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTIL 292
Query: 272 SGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNE 331
+GY +++ EA + F +M S+ V +E
Sbjct: 293 TGYVN-------------------------------SEKSGEATEFFTKM-HSSGVRFDE 320
Query: 332 VTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE 391
+L VL AVA L + G I A + LD V V++ALIDMY+KCG + A L+F
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 392 MPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF-RPNEITMIGVLSACNHCGLVDE 450
MP K WN +I+G+A NG + EA+++F + +E F +P+ T + +L+ C+HC + E
Sbjct: 381 MPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPME 440
Query: 451 GRRCFKAM--EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
+ M + I P +EH ++ +G+ G + +A+ +IQ F +G+ + L A
Sbjct: 441 VMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGA 500
Query: 509 CGHFKDVSRAERVLRETVKMEKECAGD--YVLLRNLYATEKRWTDVEDVKHMMKMRGSYK 566
C KD+ A+ V + +++ + Y+++ NLYA +RW +V ++ +M+ G K
Sbjct: 501 CSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLK 560
Query: 567 EVACSVIE 574
EV S I+
Sbjct: 561 EVGSSWID 568
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
L++ +P+ L+ +L + G + L + G+ + + R+S +L+ Y
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
+ A +F+EMP+ + SWN+L++G+ +GR +E + +F + R PNE + L+A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 442 CNHCGLVDEGRRCFKAMEGFGIAPQIEHYG-CMVDLLGRAGCLDEAENLIQTM 493
C L G + G+ G C++D+ G+ G +D+A + Q M
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 188/353 (53%), Gaps = 9/353 (2%)
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF 296
N ++ Y G +D+A+ LF ++ ++++SW S+++G +NGDV +A +FD MP+KN+
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
+WN MI + P ++ LFREM+ A + NE TL+ +L A L G +
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMV-RAGFQGNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
R L+ SV + TALIDMY KC E+G AR +F+ + + +WN +I ++GR +
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGG 335
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVD 475
LE+FE MI RP+E+T +GVL C GLV +G+ + M + F I P H CM +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 476 LLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKEC 532
L AG +EAE ++ +P ++ L + + + E + + ++ +
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLN 455
Query: 533 AGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAG 585
Y LL N+Y+ RW DV V+ M+K R + C ++++ +E V G
Sbjct: 456 YKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL----KEIVHG 504
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 45/324 (13%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F P +TF +L+ G HG A+K+G L V +L+ MY G L A+
Sbjct: 114 FVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAK 173
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM 251
K+F E+ +R VSW ++I G R GD+ A KLFD MP++++ ++N+MI Y+ +
Sbjct: 174 KLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGV 233
Query: 252 AQDLFDKM---------------------------------------RDKNVISWTSMVS 272
+ LF +M + +V+ T+++
Sbjct: 234 SISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALID 293
Query: 273 GYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
Y + +V AR +FD + +N TWN MI HC + +P L+LF E +++ + P+EV
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF-EAMINGMLRPDEV 352
Query: 333 TLLSVLPAVADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE 391
T + VL A G + G + ++ + + ++Y+ G A +
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKN 412
Query: 392 MPEK----ETASWNALINGFAVNG 411
+P++ E+ W L++ G
Sbjct: 413 LPDEDVTPESTKWANLLSSSRFTG 436
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 32/189 (16%)
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
L+ N + + + P +AL + ++L V P+ T +S++ + +D G
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFV-PDSYTFVSLISCIEKTCCVDSGKMCH 141
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAK 414
G A + D + V +L+ MY CG + A+ LF E+P+++ SWN++I G NG
Sbjct: 142 GQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVL 201
Query: 415 EA-------------------------------LEVFEMMIREGFRPNEITMIGVLSACN 443
A + +F M+R GF+ NE T++ +L+AC
Sbjct: 202 AAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 444 HCGLVDEGR 452
+ EGR
Sbjct: 262 RSARLKEGR 270
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 20/229 (8%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V A + FD ++ N MI+ + +LFR++ R F+
Sbjct: 200 VLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAG---------FQGNE 250
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T L+ C +EG VH ++ + + TAL+DMY K +G AR++FD
Sbjct: 251 STLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS 310
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPE----RDVAAFNVMIDGYVKLGCMDMA 252
+S R++V+W +I+ + G +LF+ M D F ++ G + G +
Sbjct: 311 LSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQG 370
Query: 253 QDLFDKMRDKNVI------SWTSMVSGYCQNGDVESARLMFDLMPEKNL 295
Q + M D+ I W M + Y G E A +P++++
Sbjct: 371 QSYYSLMVDEFQIKPNFGHQWC-MANLYSSAGFPEEAEEALKNLPDEDV 418
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 247/538 (45%), Gaps = 97/538 (18%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
V+HAR+ FD KRD +MI+ + LF+++ R K
Sbjct: 63 VKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR---------EDVKANQ 113
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
T+ +++K C +EG+++HG K +L V +AL+ +Y
Sbjct: 114 FTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYA-------------- 159
Query: 197 MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF 256
RCG M EAR FD M ERD+ ++N MIDGY C D + LF
Sbjct: 160 -----------------RCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLF 202
Query: 257 DKM-----------------------------------------RDKNVISWTSMVSGYC 275
M R +I S+V+ Y
Sbjct: 203 QLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIR--SLVNAYV 260
Query: 276 QNGDVESARLMFDLMPEKNLFTWNAMIGGHCK-NKQPHEALKLFREMLMSASVEPNEVTL 334
+ G + +A + + +++L + A+I G + N +A +F++M+ + +EV +
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI-RMKTKMDEVVV 319
Query: 335 LSVLPAVADLGALDLGGWIQGFA-RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
S+L + ++ +G I GFA + ++ V + +LIDMYAK GEI A L FEEM
Sbjct: 320 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 379
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
EK+ SW +LI G+ +G ++A++++ M E +PN++T + +LSAC+H G + G +
Sbjct: 380 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWK 439
Query: 454 CFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGII-LSS-----FL 506
+ M GI + EH C++D+L R+G L+EA LI++ GI+ LSS FL
Sbjct: 440 IYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS----KEGIVSLSSSTWGAFL 495
Query: 507 FACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGS 564
AC +V ++ + + ME +Y+ L ++YA W + + + +MK GS
Sbjct: 496 DACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGS 553
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 182/354 (51%), Gaps = 11/354 (3%)
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR 202
+K C+ ++ L +HG ++ NGFC +L + L+D+Y+K G + ARK+FD +S+R
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 203 VSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LGCMDMAQDLFDK 258
VSWTA+I ++RCG +A LF M DV A +K LGC+ +
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 259 MRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEA 314
+ N+I ++++S Y + G +E ARL FD M E++L +WNAMI G+ N +
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTS 198
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
LF+ ML +P+ T S+L A + L++ + G A + S + +L++
Sbjct: 199 FSLFQLMLTEGK-KPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 375 MYAKCGEIGRARLLFEEMPEKETASWNALINGFA-VNGRAKEALEVFEMMIREGFRPNEI 433
Y KCG + A L E +++ S ALI GF+ N +A ++F+ MIR + +E+
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEV 317
Query: 434 TMIGVLSACNHCGLVDEGRRCFK-AMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
+ +L C V GR+ A++ I + ++D+ ++G +++A
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDA 371
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 257/518 (49%), Gaps = 22/518 (4%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A R +++ ++D FL S+++ + E F ++ R++ + +P T+
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM------RSLGL---QPNNFTY 328
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLG-SARKVFDEMS 198
+A++ C+A + G ++H +K GF V ALVDMY+K A +VF M
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGC---------M 249
+ VSWT +I+G G + + L M +R+V V + G ++ C +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLR-ACSKLRHVRRVL 447
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
++ L + D ++ S+V Y + V+ A + M ++ T+ +++ +
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
+ AL + M + ++++L + A A+LGAL+ G + ++ + G+ V
Sbjct: 508 KHEMALSVINYM-YGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
+L+DMY+KCG + A+ +FEE+ + SWN L++G A NG AL FE M +
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
P+ +T + +LSAC++ L D G F+ M+ + I PQ+EHY +V +LGRAG L+EA
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATG 686
Query: 489 LIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKR 548
+++TM N +I + L AC + ++S E + + + + Y+LL +LY +
Sbjct: 687 VVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Query: 549 WTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVAGD 586
+ +++M + K++ S +EV G+ FV+ D
Sbjct: 747 PELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 191/441 (43%), Gaps = 39/441 (8%)
Query: 16 ERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNL----NLLAKFITTCASIAVSTSRRN 71
++ C+ +L + L IH +++ + NL NLL+ ++ T
Sbjct: 24 QKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDG---------- 73
Query: 72 EAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTP 131
+ +AR+ FD R F MI+ ++F+ +LF + M +
Sbjct: 74 -----IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEE---------MMASG 119
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
P TF+++V+ C G VHG +K GF + V ++L D+Y K G A
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA----AFNVMIDGYVKLG 247
++F + +SWT +I EA + + M + V F ++ LG
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG 239
Query: 248 C---MDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGG 304
+ ++ + NV+ TS+V Y Q +E A + + E+++F W +++ G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
+N + EA+ F EM S ++PN T ++L + + +LD G I + +
Sbjct: 300 FVRNLRAKEAVGTFLEM-RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 365 SVRVSTALIDMYAKC--GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEM 422
S V AL+DMY KC E+ +R +F M SW LI G +G ++ +
Sbjct: 359 STDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 423 MIREGFRPNEITMIGVLSACN 443
M++ PN +T+ GVL AC+
Sbjct: 418 MVKREVEPNVVTLSGVLRACS 438
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 157/334 (47%), Gaps = 10/334 (2%)
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIV 210
++R GL +H +K G +L + L+ +Y+K + +ARK+FDEMS R+ +WT +I
Sbjct: 38 SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMIS 97
Query: 211 GYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK--LGCMDMAQ------DLFDKMRDK 262
+T+ + + A LF+ M V+ G D++ + +
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML 322
N + +S+ Y + G + A +F + + +W MI ++ EAL+ + EM+
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMV 217
Query: 323 MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
A V PNE T + +L A + LG L+ G I + + +V + T+L+D Y++ ++
Sbjct: 218 -KAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKM 275
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
A + E++ W ++++GF N RAKEA+ F M G +PN T +LS C
Sbjct: 276 EDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLC 335
Query: 443 NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
+ +D G++ G + +VD+
Sbjct: 336 SAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 33/290 (11%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C + + +L+IHA++LR VD + + + A S+ + + A +++R +
Sbjct: 434 LRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA----SSRKVDYAWNVIRSMK 489
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
R RD S++T + + ++ + G R ++ PG
Sbjct: 490 R-------RDNITYTSLVTRFNELGKHEMALSVI-NYMYGDGIRMDQLSL--PG------ 533
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+ A G +H +VK+GF V +LVDMY K G L A+KVF+E++
Sbjct: 534 FISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPD 593
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
VSW ++ G G +S A F+ M E D F +++ D+ + F
Sbjct: 594 VVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQ 653
Query: 258 KMR-----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMI 302
M+ + V + +V + G +E A + + M K NAMI
Sbjct: 654 VMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKP----NAMI 699
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 226/498 (45%), Gaps = 90/498 (18%)
Query: 30 TITTLLQIHA-FMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATH 88
T L QIHA ++ NS+ ++ I+ C + + + R FD+
Sbjct: 18 TFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSY----------YTRLIFDSVT 67
Query: 89 KRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
+ F+ NSM + ++ L+ R P +F ++K
Sbjct: 68 FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSR---------CGIMPDAFSFPVVIKS--- 115
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
A R G+ + K GF D YV ++DMYVK + SARKVFD++S+R W +
Sbjct: 116 --AGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 209 IVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT 268
I GY + G+ EA KLFD+MPE DV ++ VMI G+ K+ ++ A+ FD+M +K+V+SW
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWN 233
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
+M+SGY QNG E +AL+LF +ML V
Sbjct: 234 AMLSGYAQNGFTE-------------------------------DALRLFNDML-RLGVR 261
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC--------- 379
PNE T + V+ A + L + K++ + V TAL+DM+AKC
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 380 -----------------------GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEA 416
G++ AR LF+ MP++ SWN+LI G+A NG+A A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 417 LEVFEMMIREG-FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
+E FE MI G +P+E+TMI VLSAC H ++ G + I Y ++
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 476 LLGRAGCLDEAENLIQTM 493
+ R G L EA+ + M
Sbjct: 442 MYARGGNLWEAKRVFDEM 459
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 186/348 (53%), Gaps = 45/348 (12%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM- 228
D+ T ++ + K L +ARK FD M E+S VSW A++ GY + G +A +LF+ M
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 229 -----------------------PERDVAAFNVMIDGYVKLGC------MDM-------- 251
P + ++ + V+L C +DM
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 252 -AQDLFDKM-RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
A+ +F+++ +N+++W +M+SGY + GD+ SAR +FD MP++N+ +WN++I G+ N
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
Q A++ F +M+ +P+EVT++SVL A + L+LG I + R+ ++ +
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGY 436
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
+LI MYA+ G + A+ +F+EM E++ S+N L FA NG E L + M EG
Sbjct: 437 RSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE 496
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLL 477
P+ +T VL+ACN GL+ EG+R FK++ P +HY CM DLL
Sbjct: 497 PDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLADHYACM-DLL 539
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 206/428 (48%), Gaps = 37/428 (8%)
Query: 126 TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFG 185
+M F P T+ +++ + G ++HG+ +KNG + + AL+D Y K G
Sbjct: 306 SMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCG 365
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTR-----CGDM---------------------- 218
L +R FD + +++ V W A++ GY C +
Sbjct: 366 NLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKS 425
Query: 219 ---SEARKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMV 271
+E ++L V+ E + + ++ Y K M+ A L D + ++V
Sbjct: 426 CCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIV 485
Query: 272 SG-YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
+G Y + G + + + + + +WN I ++ E ++LF+ ML S ++ P+
Sbjct: 486 AGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS-NIRPD 544
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLD-GSVRVSTALIDMYAKCGEIGRARLLF 389
+ T +S+L + L L LG I G + V LIDMY KCG I +F
Sbjct: 545 KYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVF 604
Query: 390 EEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
EE EK +W ALI+ ++G +EALE F+ + GF+P+ ++ I +L+AC H G+V
Sbjct: 605 EETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVK 664
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC 509
EG F+ M+ +G+ P+++HY C VDLL R G L EAE+LI+ MPF A+ + +FL C
Sbjct: 665 EGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Query: 510 GHFKDVSR 517
F + R
Sbjct: 725 NRFAEEQR 732
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 28/406 (6%)
Query: 52 LLAKFITTCASIAVSTSRRNEAVSI------VRHARRFFDATHKRDEFLCNSMITTHFAI 105
L A IT C+ + N +S+ V A + FD +R++ N++I +
Sbjct: 34 LHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKY 93
Query: 106 RQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKN 165
+ + +F + M + P T + L+ A + R G ++HG+++K
Sbjct: 94 GDVDKAWGVFSE---------MRYFGYLPNQSTVSGLLS--CASLDVRAGTQLHGLSLKY 142
Query: 166 G-FCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEA--- 221
G F D +V T L+ +Y + +L A +VF++M +S +W ++ G + E
Sbjct: 143 GLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 222 -RKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLF----DKMRDKNVISWTSMVSGYCQ 276
R+L + ++F ++ G + +D+++ L K D + S++S Y +
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGK 262
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLS 336
G+ A MF ++ +WNA+I K++ P +ALKLF M PN+ T +S
Sbjct: 263 CGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSM-PEHGFSPNQGTYVS 321
Query: 337 VLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE 396
VL + + L G I G + + + + ALID YAKCG + +RL F+ + +K
Sbjct: 322 VLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKN 381
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
WNAL++G+A N L +F M++ GFRP E T L +C
Sbjct: 382 IVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 144/318 (45%), Gaps = 41/318 (12%)
Query: 208 VIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISW 267
+I Y + G++S A K+FD MPER+ +FN +I GY K G +D A +F +MR +
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 268 TSMVSGY--CQNGDV------------------------------------ESARLMFDL 289
S VSG C + DV E A +F+
Sbjct: 115 QSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFED 174
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREML-MSASVEPNEVTLLSVLPAVADLGALD 348
MP K+L TWN M+ E + FRE++ M AS+ E + L VL V+ + LD
Sbjct: 175 MPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL--TESSFLGVLKGVSCVKDLD 232
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
+ + A +K LD + V +LI Y KCG A +F++ + SWNA+I A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
+ +AL++F M GF PN+ T + VL + L+ GR+ + G I
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 469 HYGCMVDLLGRAGCLDEA 486
++D + G L+++
Sbjct: 353 LGNALIDFYAKCGNLEDS 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 163/416 (39%), Gaps = 74/416 (17%)
Query: 36 QIHAFMLRNSVDNNL---NLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDE 92
QIH +++N + + N L F C ++ +R FD ++
Sbjct: 337 QIHGMLIKNGCETGIVLGNALIDFYAKCGNL--------------EDSRLCFDYIRDKN- 381
Query: 93 FLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMAT 152
+C + + + +A + +LF M F+P +TF+ +K C
Sbjct: 382 IVCWNALLSGYANKDGPICLSLFLQ---------MLQMGFRPTEYTFSTALKSC----CV 428
Query: 153 REGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG- 211
E ++H V V+ G+ + YV ++L+ Y K ++ A + D S + V ++ G
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 212 YTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV------- 264
Y+R G E+ KL + + D ++N+ I + + +LF M N+
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 265 ISWTSMVSGYC---------------------------------QNGDVESARLMFDLMP 291
+S S+ S C + G + S +F+
Sbjct: 549 VSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR 608
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
EKNL TW A+I + EAL+ F+E L S +P+ V+ +S+L A G + G
Sbjct: 609 EKNLITWTALISCLGIHGYGQEALEKFKETL-SLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP-EKETASWNALING 406
+ + ++ + +D+ A+ G + A L EMP + W ++G
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 8/227 (3%)
Query: 268 TSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASV 327
+++S Y + G+V A +FD MPE+N ++N +I G+ K +A +F EM +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 328 EPNEVTLLSVLPAVADLGALDL--GGWIQGFARRKKL-DGSVRVSTALIDMYAKCGEIGR 384
PN+ T+ +L +LD+ G + G + + L V T L+ +Y + +
Sbjct: 113 -PNQSTVSGLLSC----ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 385 ARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH 444
A +FE+MP K +WN +++ G KE + F ++R G E + +GVL +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 445 CGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
+D ++ + G+ +I ++ G+ G AE + Q
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 356 FARRKKLDG-----------SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALI 404
FAR K L V V +I +Y K GE+ A +F++MPE+ S+N +I
Sbjct: 28 FARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTII 87
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD--EGRRCFKAMEGFG 462
G++ G +A VF M G+ PN+ T+ G+LS C +D G + +G
Sbjct: 88 KGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS----CASLDVRAGTQLHGLSLKYG 143
Query: 463 IAPQIEHYG-CMVDLLGRAGCLDEAENLIQTMPFDA 497
+ G C++ L GR L+ AE + + MPF +
Sbjct: 144 LFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKS 179
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 209/433 (48%), Gaps = 70/433 (16%)
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFD 195
H F+ +K C A G VH +VK+ F + +V AL+DM
Sbjct: 48 AHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDM--------------- 92
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
Y +C +S ARKL
Sbjct: 93 ----------------YGKCLSVSHARKL------------------------------- 105
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMF---DLMPEKNLFTWNAMIGGHCKNKQ-P 311
FD++ +N + W +M+S Y G V+ A ++ D+MP ++ F NA+I G +
Sbjct: 106 FDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSF--NAIIKGLVGTEDGS 163
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
+ A++ +R+M+ +PN +TLL+++ A + +GA L I +A R ++ ++ +
Sbjct: 164 YRAIEFYRKMI-EFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSG 222
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
L++ Y +CG I +L+F+ M +++ +W++LI+ +A++G A+ AL+ F+ M P+
Sbjct: 223 LVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD 282
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
+I + VL AC+H GL DE FK M+G +G+ +HY C+VD+L R G +EA +I
Sbjct: 283 DIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVI 342
Query: 491 QTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWT 550
Q MP + L AC ++ ++ AE RE + +E E +YVLL +Y + R
Sbjct: 343 QAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQE 402
Query: 551 DVEDVKHMMKMRG 563
+ E ++ MK G
Sbjct: 403 EAERLRLKMKESG 415
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 123/296 (41%), Gaps = 40/296 (13%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTL------------FRDLCRGTA- 123
V HAR+ FD +R+ + N+MI+ + + E L F + +G
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 124 -----------TRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLY 172
R M FKP T ALV C+A A R E+H A +N
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD------ 226
+ + LV+ Y + G + + VFD M +R V+W+++I Y GD A K F
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 227 VMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVI-----SWTSMVSGYCQNGDVE 281
V P+ D+A NV+ G D A F +M+ + ++ +V + G E
Sbjct: 279 VTPD-DIAFLNVL-KACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFE 336
Query: 282 SARLMFDLMPEK-NLFTWNAMIGGHCKNKQPHEALKL-FREMLMSASVEPNEVTLL 335
A + MPEK TW A++G C+N E ++ RE+LM P LL
Sbjct: 337 EAYKVIQAMPEKPTAKTWGALLGA-CRNYGEIELAEIAARELLMVEPENPANYVLL 391
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 209/414 (50%), Gaps = 11/414 (2%)
Query: 170 DLYVATALVDMYVKFG-VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
++ +++ LV Y K + ++ VF M R+ SW +I ++R G S++ LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 229 PERDVAAFNVMIDGYVKLGCM--------DMAQDLFDKMR-DKNVISWTSMVSGYCQNGD 279
+ + C D+ L K+ ++ +++V Y G
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 280 VESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
+ AR +FD MP ++ + AM GG+ + + L +FREM S + V ++S+L
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSG-FALDSVVMVSLLM 243
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
A LGAL G + G+ R+ + + A+ DMY KC + A +F M ++ S
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
W++LI G+ ++G + ++F+ M++EG PN +T +GVLSAC H GLV++ F+ M+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 460 GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAE 519
+ I P+++HY + D + RAG L+EAE ++ MP + ++ + L C + +V E
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 520 RVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVI 573
RV RE ++++ A YV L LY+ R+ + E ++ MK + K CS I
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 152/401 (37%), Gaps = 108/401 (26%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P T +++ C+A + G +H + +K GF L+V++ALV MYV G L ARK
Sbjct: 131 RPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARK 190
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVA------------------ 234
+FD+M R V +TA+ GY + G+ +F M A
Sbjct: 191 LFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGA 250
Query: 235 ---------------------AFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSG 273
N + D YVK +D A +F M ++VISW+S++ G
Sbjct: 251 LKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILG 310
Query: 274 YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
Y +GDV + KLF EML +EPN VT
Sbjct: 311 YGLDGDVV-------------------------------MSFKLFDEML-KEGIEPNAVT 338
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
L VL A A G ++ + + ++ ++ D ++ G + A E+MP
Sbjct: 339 FLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP 398
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
K P+E M VLS C G V+ G R
Sbjct: 399 VK----------------------------------PDEAVMGAVLSGCKVYGNVEVGER 424
Query: 454 CFKAMEGFGIAP-QIEHYGCMVDLLGRAGCLDEAENLIQTM 493
A E + P + +Y + L AG DEAE+L Q M
Sbjct: 425 V--ARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWM 463
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 47/325 (14%)
Query: 79 HARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHT 138
HAR+ FD RD L +M + + +FR+ M + F
Sbjct: 187 HARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFRE---------MGYSGFALDSVV 237
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+L+ C A + G VHG ++ CL L + A+ DMYVK +L A VF MS
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDK 258
R +SW+++I+GY GD+ + KLFD M + +
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI------------------------- 332
Query: 259 MRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFT----WNAMIGGHCKNKQPHEA 314
+ N +++ ++S G VE + L F LM E N+ + ++ + EA
Sbjct: 333 --EPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEA 390
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKLDGSVRVSTALI 373
K +M V+P+E + +VL G +++G + + + K S V+ A
Sbjct: 391 EKFLEDM----PVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA-- 444
Query: 374 DMYAKCGEIGRARLLFEEMPEKETA 398
+Y+ G A L + M EK+ +
Sbjct: 445 GLYSAAGRFDEAESLRQWMKEKQIS 469
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/319 (35%), Positives = 173/319 (54%), Gaps = 9/319 (2%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F P T +++K C+ A R G +VH + VK D++V T+L+DMY K G + R
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVK----LG 247
KVFD MS R+ V+WT++I + R G EA LF +M R + A N+ + ++ +G
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 248 CMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
+ + ++L ++ +KNV +++V YC+ G+ A + +P +++ +W AMI
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMIS 459
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLD 363
G EAL +EM+ VEPN T S L A A+ +L +G I A++
Sbjct: 460 GCSSLGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL 518
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMM 423
+V V +ALI MYAKCG + A +F+ MPEK SW A+I G+A NG +EAL++ M
Sbjct: 519 SNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRM 578
Query: 424 IREGFRPNEITMIGVLSAC 442
EGF ++ +LS C
Sbjct: 579 EAEGFEVDDYIFATILSTC 597
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 188/381 (49%), Gaps = 16/381 (4%)
Query: 158 VHGVAVKNGFCLD---LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTR 214
+H +A+K C D +Y L+ V+ G L ARKVFD M E++ V+WTA+I GY +
Sbjct: 104 IHAMALK---CFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLK 160
Query: 215 CGDMSEARKLFDVMPERDV-----AAFNVMIDGYVKLGCMDMAQDLFDKMRD---KNVIS 266
G EA LF+ + + F +++ + ++ + + M N+I
Sbjct: 161 YGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIV 220
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
+S+V Y Q G++ SA FD+M EK++ +W A+I + +A+ +F ML
Sbjct: 221 ESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF 280
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+ PNE T+ S+L A ++ AL G + ++ + V V T+L+DMYAKCGEI R
Sbjct: 281 L-PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCR 339
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
+F+ M + T +W ++I A G +EA+ +F +M R N +T++ +L AC G
Sbjct: 340 KVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL 506
+ G+ + I + +V L + G +A N++Q +P + + ++ +
Sbjct: 400 ALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMI 458
Query: 507 FACGHFKDVSRAERVLRETVK 527
C S A L+E ++
Sbjct: 459 SGCSSLGHESEALDFLKEMIQ 479
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 223/531 (41%), Gaps = 71/531 (13%)
Query: 26 KSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHARRFFD 85
+S + + +IHA L+ D + I++C R + V +AR+ FD
Sbjct: 93 QSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCV-------RLGDLV----YARKVFD 141
Query: 86 ATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKG 145
+ +++ +MI + E F LF D + T F L+
Sbjct: 142 SMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT--------NERMFVCLLNL 193
Query: 146 CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSW 205
C+ G +VHG VK G +L V ++LV Y + G L SA + FD M E+ +SW
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 206 TAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMA--------QDLFD 257
TAVI +R G +A +F M + +K + A +
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 258 KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKL 317
+M +V TS++ Y + G++ R +FD M +N TW ++I H + EA+ L
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
FR ++ + N +T++S+L A +GAL LG + + ++ +V + + L+ +Y
Sbjct: 373 FR-IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431
Query: 378 KCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
KCGE A + +++P ++ SW A+I+G + G EAL+ + MI+EG PN T
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 438 VLSAC------------------NH-----------------CGLVDEGRRCFKAMEGFG 462
L AC NH CG V E R F +M
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP--- 548
Query: 463 IAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACG 510
+ + M+ R G EA L+ M F+ + I ++ L CG
Sbjct: 549 -EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 22 LLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAVSTSRRNEAVSIVRHAR 81
L C S + ++HA +++NS++ N+ + + + S R A
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGES-----------RDAF 440
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
RD +MI+ ++ SE ++ M +P T+++
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE---------MIQEGVEPNPFTYSS 491
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
+K C + G +H +A KN +++V +AL+ MY K G + A +VFD M E++
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKN 551
Query: 202 RVSWTAVIVGYTRCGDMSEARKL 224
VSW A+I+GY R G EA KL
Sbjct: 552 LVSWKAMIMGYARNGFCREALKL 574
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 248/553 (44%), Gaps = 54/553 (9%)
Query: 82 RFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTA 141
+ FD +RD N+++++ + + F LF ++ R + F T +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNR--------VEGFGVDSFTLST 290
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS 201
L+ CT G E+HG A++ G +L V AL+ Y KF + +++ M +
Sbjct: 291 LLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQD 350
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD 261
V++T +I Y G + A ++F + E++ +N ++ G+ + G A LF M
Sbjct: 351 AVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQ 410
Query: 262 KNV----ISWTSMVS---------------GYCQ------NGDVESARL----------- 285
+ V S TS V G+C N +++A L
Sbjct: 411 RGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMAD 470
Query: 286 ---MFDLMPEKNLFTWNA---MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
MFD P NL + A +IGG+ +N P +A+ LF L + +EV+L +L
Sbjct: 471 AEEMFDQWP-SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILA 529
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS 399
LG ++G I +A + + + +LI MYAKC + A +F M E + S
Sbjct: 530 VCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVIS 589
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNH--CGLVDEGRRCFKA 457
WN+LI+ + + EAL ++ M + +P+ IT+ V+SA + + R F +
Sbjct: 590 WNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLS 649
Query: 458 MEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVS 516
M+ + I P EHY V +LG G L+EAE+ I +MP +L + L +C + S
Sbjct: 650 MKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTS 709
Query: 517 RAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVD 576
A+RV + + + E +Y+L N+Y+ W E ++ M+ RG K A S I +
Sbjct: 710 VAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHE 769
Query: 577 GRFREFVAGDYLH 589
+ F A D H
Sbjct: 770 NKIHSFHARDTSH 782
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 120/244 (49%), Gaps = 9/244 (3%)
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEAL 315
F K+R++ +++S Y + G A L+F + + ++ A+I G + EAL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 316 KLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDM 375
K+F M + V+PNE T +++L A + LG I G + SV VS +L+ +
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 376 YAK-----CGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIR-EGFR 429
Y K C ++ + LF+E+P+++ ASWN +++ G++ +A ++F M R EGF
Sbjct: 226 YDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFG 282
Query: 430 PNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+ T+ +LS+C ++ GR G+ ++ ++ + + + E+L
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 490 IQTM 493
+ M
Sbjct: 343 YEMM 346
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 50/368 (13%)
Query: 173 VATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD 232
+ AL+ Y+K G A VF +S + VS+TA+I G++R EA K+F M +
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 233 VA-----AFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNG--DVE 281
+ F ++ V++ + + + +V S++S Y ++ +
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 282 SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
+FD +P++++ +WN ++ K + H+A LF EM + TL ++L +
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM--------- 392
D L G + G A R L + V+ ALI Y+K ++ + L+E M
Sbjct: 296 TDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 393 ----------------------PEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
EK T ++NAL+ GF NG +AL++F M++ G
Sbjct: 356 EMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV-- 413
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC----MVDLLGRAGCLDEA 486
E+T + SA + CGLV E ++ + + GF I C ++D+ R + +A
Sbjct: 414 -ELTDFSLTSAVDACGLVSE-KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA 471
Query: 487 ENLIQTMP 494
E + P
Sbjct: 472 EEMFDQWP 479
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 218/468 (46%), Gaps = 36/468 (7%)
Query: 35 LQIHAFMLRNSVDNNLNL---LAKFITTCASIAVSTSRRNEAVSIVRHARRFFDATHKRD 91
L+ HA ++N + N++ L L C + + ARR FD +RD
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGL--------------ARRVFDEIVERD 279
Query: 92 EFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMA 151
+ +MI ++ E LFR + ++ P T ++ A
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTM--------ISEEKIYPNSVILTTILPVLGDVKA 331
Query: 152 TREGLEVHGVAVKN-GFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIV 210
+ G EVH +K+ + +V + L+D+Y K G + S R+VF +R+ +SWTA++
Sbjct: 332 LKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMS 391
Query: 211 GYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDL----FDKMRDK 262
GY G +A + M + DV ++ +L + +++ +
Sbjct: 392 GYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP 451
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML 322
NV TS++ Y + G E +FD + ++N+ W AMI + +N +++FR ML
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 323 MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEI 382
+S P+ VT+ VL +DL AL LG + G +K+ + VS +I MY KCG++
Sbjct: 512 LSKH-RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDL 570
Query: 383 GRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
A F+ + K + +W A+I + N ++A+ FE M+ GF PN T VLS C
Sbjct: 571 RSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSIC 630
Query: 443 NHCGLVDEGRRCFKAM-EGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+ G VDE R F M + + P EHY +++LL R G ++EA+ L
Sbjct: 631 SQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 23/332 (6%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TF+AL++ C + G +VH NG + ++ T LV MY G + A+KVFDE
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 198 SERSRVSWTA-----VIVGYTRCGDM----SEARKL---FDVMPERDV----AAFNVMID 241
+ + SW A VI G R D+ +E R+L +V +V A + +
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 242 GYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAM 301
G +K + + LF+ +V TS+V Y + G V AR +FD + E+++ W AM
Sbjct: 233 G-LKTHALAIKNGLFN-----SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAM 286
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA-RRK 360
I G NK+ EAL LFR M+ + PN V L ++LP + D+ AL LG + + K
Sbjct: 287 IAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK 346
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF 420
V + LID+Y KCG++ R +F ++ SW AL++G+A NGR +AL
Sbjct: 347 NYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSI 406
Query: 421 EMMIREGFRPNEITMIGVLSACNHCGLVDEGR 452
M +EGFRP+ +T+ VL C + +G+
Sbjct: 407 VWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 206/443 (46%), Gaps = 39/443 (8%)
Query: 25 CKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFI---TTCASIAVSTSRRNEAVSIVRHAR 81
C +K++ Q+H + N +++N L K + T C S V+ A+
Sbjct: 121 CVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS--------------VKDAQ 166
Query: 82 RFFDATHKRDEFLCNSMI--TTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
+ FD + + + N+++ T +++ + + F + M ++
Sbjct: 167 KVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE---------MRELGVDLNVYSL 217
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE 199
+ + K A R+GL+ H +A+KNG +++ T+LVDMY K G +G AR+VFDE+ E
Sbjct: 218 SNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVE 277
Query: 200 RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYV----------KLGCM 249
R V W A+I G EA LF M + N +I + KLG
Sbjct: 278 RDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKE 337
Query: 250 DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
A L K + + ++ YC+ GD+ S R +F ++N +W A++ G+ N
Sbjct: 338 VHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANG 397
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
+ +AL+ M P+ VT+ +VLP A+L A+ G I +A + +V +
Sbjct: 398 RFDQALRSIVWM-QQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 370 TALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFR 429
T+L+ MY+KCG LF+ + ++ +W A+I+ + N + +EVF +M+ R
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHR 516
Query: 430 PNEITMIGVLSACNHCGLVDEGR 452
P+ +TM VL+ C+ + G+
Sbjct: 517 PDSVTMGRVLTVCSDLKALKLGK 539
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 245/525 (46%), Gaps = 37/525 (7%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +A FD +RD N+MI+ + +F D+ R +P
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRW---------EIRPTE 136
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFC-LDLYVATALVDMYVKFGVLGSARKVFD 195
TF+ L T R G ++HG A+ +G +L V +++DMY + GV A VF
Sbjct: 137 FTFSILASLVTC---VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFL 193
Query: 196 EMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDL 255
M +R VSW +I+ + G+ A F +M E ++ D Y + + DL
Sbjct: 194 TMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP-----DEYTVSMVVSICSDL 248
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESA---------RLMFDLMPEKNLFTW-----NAM 301
+ + K ++ + G+ N V A RL + + L W N+M
Sbjct: 249 RELSKGKQALA-LCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSM 307
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
IG + + +AL+LF + M+ SV P++ T SVL ++ + LD G + +
Sbjct: 308 IGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLG 365
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVF- 420
D V+T+L++MY K G + A +F + K+ WN +I G A N RA E+L +F
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 421 EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME-GFGIAPQIEHYGCMVDLLGR 479
++++ + +P+ +T++G+L AC + G V+EG + F +ME G+ P EHY C+++LL R
Sbjct: 426 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 485
Query: 480 AGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLL 539
G ++EA+++ +PF+ + I L A D AE V + ++ E + + Y++L
Sbjct: 486 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 545
Query: 540 RNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFREFVA 584
+Y RW + +++ M S I ++ F A
Sbjct: 546 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 168/393 (42%), Gaps = 45/393 (11%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P F+ LV + VH ++ GF Y + +Y K G + +A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
FD++ +++ ++W + G + G ++ A LFD MPERDV ++N MI G V G +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 254 DLFDKMR-------------------------------------DKNVISWTSMVSGYCQ 276
+F M+ N++ W S++ Y +
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRR 181
Query: 277 NGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLF---REMLMSASVEPNEVT 333
G + A +F M ++++ +WN +I + AL F REM ++P+E T
Sbjct: 182 LGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM----EIQPDEYT 237
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
+ V+ +DL L G + + V A IDM++KC + + LF E+
Sbjct: 238 VSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE 297
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ ++ N++I ++ + ++AL +F + + + RP++ T VLS+ N ++D G
Sbjct: 298 KWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGAD 356
Query: 454 CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
+ G ++++ + G +D A
Sbjct: 357 VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLA 389
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 2/323 (0%)
Query: 274 YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
Y +GD+++A ++F + ++L WNAMI G+ + E L ++ +M + V P++ T
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-PDQYT 211
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
SV A + L L+ G ++ + ++ V +AL+DMY KC +F+++
Sbjct: 212 FASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 394 EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ +W +LI+G+ +G+ E L+ FE M EG RPN +T + VL+ACNH GLVD+G
Sbjct: 272 TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE 331
Query: 454 CFKAME-GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHF 512
F +M+ +GI P+ +HY MVD LGRAG L EA + P + + S L AC
Sbjct: 332 HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIH 391
Query: 513 KDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSV 572
+V E + ++++ G+YV+ N YA+ V+ M+ G K+ S
Sbjct: 392 GNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQ 451
Query: 573 IEVDGRFREFVAGDYLHSNLEVI 595
IE+ G F+ D H E I
Sbjct: 452 IELQGEVHRFMKDDTSHRLSEKI 474
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 138/337 (40%), Gaps = 14/337 (4%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T+ L++ C +G +H GF L+ Y+ L+ +Y G L +A +F +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 198 SERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAAFNVMIDGYVKLGCMDMAQD-- 254
R + W A+I GY + G E ++ D+ R V + +D +
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 255 -----LFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNK 309
+ + N+I +++V Y + +FD + +N+ TW ++I G+ +
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK--LDGSVR 367
+ E LK F +M PN VT L VL A G +D GW ++ ++ ++ +
Sbjct: 290 KVSEVLKCFEKM-KEEGCRPNPVTFLVVLTACNHGGLVD-KGWEHFYSMKRDYGIEPEGQ 347
Query: 368 VSTALIDMYAKCGEIGRARLLFEEMPEKETAS-WNALINGFAVNGRAKEALEVFEMMIRE 426
A++D + G + A + P KE W +L+ ++G K LE+ E
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVK-LLELAATKFLE 406
Query: 427 GFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
N + + CGL + + + ME G+
Sbjct: 407 LDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGV 443
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 11 LWSTA-----ERKCLDLLQCKSKKTITTLLQIHAFMLRNSVDNNLNLLAKFITTCASIAV 65
LWS+ E + L +CK +K T +IHA M N L K + A+
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLIL---YAL 155
Query: 66 STSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATR 125
S + + F + RD N+MI+ + E ++ D
Sbjct: 156 SGDLQTAGI--------LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD-------- 199
Query: 126 TMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFG 185
M P +TF ++ + C+A G H V +K ++ V +ALVDMY K
Sbjct: 200 -MRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCS 258
Query: 186 VLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMID 241
+VFD++S R+ ++WT++I GY G +SE K F+ M E + F V++
Sbjct: 259 SFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLT 318
Query: 242 GYVKLGCMDMAQDLFDKMRDKNVIS-----WTSMVSGYCQNGDVESARLMFDLMP-EKNL 295
G +D + F M+ I + +MV + G ++ A P +++
Sbjct: 319 ACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP 378
Query: 296 FTWNAMIGG 304
W +++G
Sbjct: 379 PVWGSLLGA 387
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 372 LIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPN 431
L+ +YA G++ A +LF + ++ WNA+I+G+ G +E L ++ M + P+
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPD 208
Query: 432 EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQ 491
+ T V AC+ ++ G+R M I I +VD+ + + +
Sbjct: 209 QYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFD 268
Query: 492 TMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKE 531
+ N I +S + G+ VS VL+ KM++E
Sbjct: 269 QLS-TRNVITWTSLISGYGYHGKVS---EVLKCFEKMKEE 304
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 190/409 (46%), Gaps = 24/409 (5%)
Query: 183 KFGVLGSARKVFDEMSE-RSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMID 241
K G L SA + MSE R SW +VI G G E+ + F M + D
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG----KIRHD 580
Query: 242 GYVKLGCMDMAQDL-------------FDKMRDKNVISWTSMVSGYCQNGDVESARLMFD 288
LG + + +L +R+ + ++++ Y + D+ESA +F
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
L+ + NL +WN +I +NK E +LFR + +EPNE+T + +L A LG+
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLSASTQLGSTS 696
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
G R+ + VS AL+DMY+ CG + +F ++WN++I+
Sbjct: 697 YGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 409 VNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQ 466
+G ++A+E+F E+ PN+ + I +LSAC+H G +DEG +K M E FG+ P
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETV 526
EH +VD+LGRAG L EA I + + + L AC + D + V
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLF 876
Query: 527 KMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEV 575
+ME + A Y+ L N Y W + ++ M++ K SVI+V
Sbjct: 877 EMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 180/410 (43%), Gaps = 28/410 (6%)
Query: 80 ARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTF 139
A F+ RD N+++ A F E F G + ++ +P T
Sbjct: 345 AETVFEELVCRDVISSNAILNGFAANGMFEEAF--------GILNQMQSVDKIQPDIATV 396
Query: 140 TALVKGCTACMATREGLEVHGVAVKNGF-CLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
++ C +REG VHG V+ L V +++DMY K G+ A +F +
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTT 456
Query: 199 ERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
R VSW ++I +++ G +A+ LF +V+ E + F++ + C +F
Sbjct: 457 HRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 258 KMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPE-KNLFTWNAMIGGHCKNKQPHEALK 316
K +V W + GD+ SA L + M E ++L +WN++I G + E+L+
Sbjct: 517 K----SVHCWLQKL------GDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLR 566
Query: 317 LFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMY 376
F+ M + + +TLL + A +LG + G G A + + ++ LI MY
Sbjct: 567 AFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMY 626
Query: 377 AKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
+C +I A +F + + SWN +I+ + N +E ++F + E PNEIT +
Sbjct: 627 GRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFV 683
Query: 437 GVLSACNHCGLVDEGRR--CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLD 484
G+LSA G G + C GF P + +VD+ G L+
Sbjct: 684 GLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLE 731
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 174/408 (42%), Gaps = 55/408 (13%)
Query: 106 RQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKN 165
R F RD+ R RT T TP VH A+K
Sbjct: 81 RTMESSFMFLRDVLRSFMMRTETETP------------------------RSVHCFALKC 116
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLF 225
G DL ++ L+ Y + G L S+ +FDE+ E+ + W ++I + G A LF
Sbjct: 117 GLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLF 176
Query: 226 DVM----PERDVAAFNVMIDGYVK---------LGCMDMAQDLFDKMRDKNVISWTSMVS 272
M E D + L C+ + L N ++++
Sbjct: 177 IEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN-----ALMN 231
Query: 273 GYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
Y + ++ SA +F M +++ +WN ++ N P ++L+ F+ M S E + V
Sbjct: 232 LYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ-EADTV 290
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKL--DGSVRVSTALIDMYAKCGEIGRARLLFE 390
T V+ A + + L LG + G + + V V ++I MY+KCG+ A +FE
Sbjct: 291 TFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFE 350
Query: 391 EMPEKETASWNALINGFAVNGRAKEALEVF-EMMIREGFRPNEITMIGVLSACNHCGLVD 449
E+ ++ S NA++NGFA NG +EA + +M + +P+ T++ + S C
Sbjct: 351 ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSR 410
Query: 450 EGRRCFKAMEGFGI-----APQIEHYGCMVDLLGRAGCLDEAENLIQT 492
EGR A+ G+ + + +E ++D+ G+ G +AE L +T
Sbjct: 411 EGR----AVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 19/179 (10%)
Query: 91 DEFLC--NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTA 148
D LC N +I+ + E F LFR+L +P TF L+ T
Sbjct: 644 DPNLCSWNCVISALSQNKAGREVFQLFRNL------------KLEPNEITFVGLLSASTQ 691
Query: 149 CMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
+T G++ H ++ GF + +V+ ALVDMY G+L + KVF S +W +V
Sbjct: 692 LGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSV 751
Query: 209 IVGYTRCGDMSEARKLFDVMP-----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK 262
I + G +A +LF + E + ++F ++ G +D + +M +K
Sbjct: 752 ISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEK 810
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 246/563 (43%), Gaps = 62/563 (11%)
Query: 77 VRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGG 136
+ +AR+ FD +R+ ++IT + E F LF + ++ P
Sbjct: 112 ILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM----------LSHCFPNE 161
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF---GVLGSARKV 193
T ++++ C G +VHG+A+K G +YVA A++ MY + A V
Sbjct: 162 FTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTV 217
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDM-- 251
F+ + ++ V+W ++I + C +A +F M V G+ + +++
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGV--------GFDRATLLNICS 269
Query: 252 ----AQDLFDKMRDKNVISWTSMV--SGYCQNGDVESA----------------RLMFDL 289
+ DL K + S+ SG +V +A +L ++
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
+++ WN +I P A+ LF + L + P+ T SVL A A L
Sbjct: 330 SHCRDIVAWNGIITAFAV-YDPERAIHLFGQ-LRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAV 409
I + ++ +LI YAKCG + +F++M ++ SWN+++ +++
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM-EGFGIAPQIE 468
+G+ L VF+ M P+ T I +LSAC+H G V+EG R F++M E PQ+
Sbjct: 448 HGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN 504
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC---GHFKDVSRAERVLRET 525
HY C++D+L RA EAE +I+ MP D + ++ + L +C G+ + A L+E
Sbjct: 505 HYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL 564
Query: 526 VKMEKECAGDYVLLRNLYATEKRWTDVE-DVKHMMKMRGSYKEVACSVIEVDGRFREFVA 584
V E + Y+ + N+Y E + + +K M R KE S E+ + EF +
Sbjct: 565 V--EPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVR-KEPDLSWTEIGNKVHEFAS 621
Query: 585 GDYLHSNLEVIQLTLGQLWKHMK 607
G + E + L +L +K
Sbjct: 622 GGRHRPDKEAVYRELKRLISWLK 644
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 122/517 (23%), Positives = 206/517 (39%), Gaps = 73/517 (14%)
Query: 106 RQFSEPF-TLFRDLCRGTATRTMTMTPFKP----GGHTFTALVKGCTACMATREGLEVHG 160
R+F E TL R G R +++ P + AL + C +G+ +H
Sbjct: 27 REFVEGLRTLVRS---GDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHH 83
Query: 161 VAVKNGFCL--DLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDM 218
+ + +C ++ +A L++MY K G + AR+VFD M ER+ VSWTA+I GY + G+
Sbjct: 84 HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNE 143
Query: 219 SEARKLFDVMPER----DVAAFNVMIDGYVKLG----CMDMAQDLFDKMRDKNVISWTSM 270
E LF M + +V+ + G + + L + N + SM
Sbjct: 144 QEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAV--ISM 201
Query: 271 VSGYCQNGDVE-SARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
G C +G A +F+ + KNL TWN+MI +A+ +F M S V
Sbjct: 202 Y-GRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM-HSDGVGF 259
Query: 330 NEVTLLSVLPAV---ADLGALDLGG---WIQGFARRKKLDGSVRVSTALIDMYAKCGE-I 382
+ TLL++ ++ +DL ++ + + L V+TALI +Y++ E
Sbjct: 260 DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDY 319
Query: 383 GRARLLFEEMPE-KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
LF EM ++ +WN +I FAV + A+ +F + +E P+ T VL A
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 442 C-----------------------------------NHCGLVDEGRRCFKAMEGFGIAPQ 466
C CG +D R F M+ +
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS- 437
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETV 526
+ M+ G +D + Q M + + + L AC H V R+ R
Sbjct: 438 ---WNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMF 494
Query: 527 KMEKECA--GDYVLLRNLYATEKRWTDVEDVKHMMKM 561
+ + Y + ++ + +R+ + E+V M M
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPM 531
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 244/546 (44%), Gaps = 89/546 (16%)
Query: 76 IVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPG 135
+V A + FD R+ +CN ++ Q E LF R M +
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLR---CFCQTGESKRLFEVYLR------MELEGVAKN 212
Query: 136 GHTFTALVKGCTACMATREGLEVHGVAVKNGFCL-DLYVATALVDMYVKFGVLGSARKVF 194
G T+ +++GC+ EG ++H + VK+G+ + +++VA LVD Y
Sbjct: 213 GLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYY------------- 259
Query: 195 DEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQD 254
+ CGD+S + + F+ +PE+DV ++N ++ G + + D
Sbjct: 260 ------------------SACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 255 LFDKM--------------------RDKNVIS--------------------WTSMVSGY 274
LF KM R+ ++ S ++++ Y
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 275 CQNGDVESARLMFDLMPEKNLFTWNAMIGG--HCKNKQPHEALKLFREMLMSASVEPNEV 332
+ +E++ L++ +P NL N+++ HC + + +++F +++ +EV
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK--DIIEMF-GLMIDEGTGIDEV 418
Query: 333 TLLSVLPAVADL--GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
TL +VL A++ +L + A + V VS +LID Y K G+ +R +F+
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 391 EMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDE 450
E+ ++ING+A NG + +++ M R P+E+T++ VLS C+H GLV+E
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEE 538
Query: 451 GRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC 509
G F ++E +GI+P + Y CMVDLLGRAG +++AE L+ DA+ + SS L +C
Sbjct: 539 GELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSC 598
Query: 510 GHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVA 569
++ + R + +E E Y+ + Y + ++ + R +E+
Sbjct: 599 RIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Query: 570 CSVIEV 575
S + V
Sbjct: 659 YSSVVV 664
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 17/328 (5%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M + TF +++ C+ + REG++VH + GF +++V +ALV +Y +
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRL 162
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP--ERDVAAFNVMIDGYV 244
+ A K+FDEM +R+ ++ + + G E+++LF+V E + A N + Y+
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYM 219
Query: 245 KLGCM--------DMAQDLFDKM--RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
GC L K N+ +V Y GD+ + F+ +PEK+
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD 279
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+ +WN+++ ++L LF +M P+ +S L + + G I
Sbjct: 280 VISWNSIVSVCADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 355 GFARRKKLD-GSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
+ + D S+ V +ALIDMY KC I + LL++ +P N+L+ G
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSA 441
K+ +E+F +MI EG +E+T+ VL A
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/430 (19%), Positives = 181/430 (42%), Gaps = 44/430 (10%)
Query: 19 CLDLLQCKSKKTITTLLQIHAFMLRN--SVDNNL--NLLAKFITTCASIAVSTSRRNEAV 74
C + C + + Q+H+ ++++ ++ N N+L + + C ++ S
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM------- 269
Query: 75 SIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKP 134
R F+A ++D NS+++ + LF M +P
Sbjct: 270 -------RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFS---------KMQFWGKRP 313
Query: 135 GGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLD-LYVATALVDMYVKFGVLGSARKV 193
F + + C+ + G ++H +K GF + L+V +AL+DMY K + ++ +
Sbjct: 314 SIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALL 373
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
+ + + +++ CG + ++F +M + V + +K + + +
Sbjct: 374 YQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPE 433
Query: 254 DL----------FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIG 303
L +V S++ Y ++G E +R +FD + N+F ++I
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 304 GHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKL 362
G+ +N + +K+ REM ++ P+EVT+LSVL + G ++ G I + +
Sbjct: 494 GYARNGMGTDCVKMLREM-DRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGI 552
Query: 363 DGSVRVSTALIDMYAKCGEIGRA-RLLFEEMPEKETASWNALINGFAVNGR---AKEALE 418
++ ++D+ + G + +A RLL + + + +W++L+ ++ + A E
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAE 612
Query: 419 VFEMMIREGF 428
V + E F
Sbjct: 613 VLMNLEPENF 622
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 50/348 (14%)
Query: 214 RCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTS 269
+ G++ A + FD M RDV +N++I G + GC A +L+ +M ++ ++ S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 270 MVSG-----YCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREML-- 322
++S +C+ G R++ L N+F +A++G + + ALKLF EML
Sbjct: 118 VLSVCSDELFCREGIQVHCRVI-SLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 323 --------------MSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR-RKKLDG--- 364
S EV L L VA G L I+G + R +G
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG-LTYCYMIRGCSHDRLVYEGKQL 235
Query: 365 ------------SVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGR 412
++ V+ L+D Y+ CG++ + F +PEK+ SWN++++ A G
Sbjct: 236 HSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGS 295
Query: 413 AKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR--CFKAMEGFGIAPQIEHY 470
++L++F M G RP+ + L+ C+ + G++ C+ GF ++ +
Sbjct: 296 VLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS-SLHVQ 354
Query: 471 GCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACGHFKDV 515
++D+ G+ ++ + L Q++P + +++S L CG KD+
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTS-LMHCGITKDI 401
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 185/391 (47%), Gaps = 28/391 (7%)
Query: 132 FKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
F+P TFT+L+ G C+ R E + + V+ G D+ + T ++D K G +
Sbjct: 138 FEPDIVTFTSLING--FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 190 ARKVFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMID 241
A +FD+M V +T+++ G G +A L M +R DV FN +ID
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 242 GYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF- 296
+VK G A++L+++M N+ ++TS+++G+C G V+ AR MF LM K F
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 297 ---TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
+ ++I G CK K+ +A+K+F EM + N +T +++ +G ++ +
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEM-SQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA-------SWNALING 406
+ + ++R L+ G++ +A ++FE+M ++E ++N L++G
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
NG+ ++AL VFE M + IT ++ G V F ++ G+ P
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
+ Y M+ L R G EA L + M D
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 139/341 (40%), Gaps = 56/341 (16%)
Query: 209 IVGYTRCGDMSEARKLFDVM-----------PERDVAAFNVMIDGYVKLGCMDMAQDLFD 257
I+ +T+ ++ K FDV+ D+ N++++ + + +A
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 258 KMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFTWNAMIGGHCKNK 309
KM + +++++TS+++G+C +E A M + M E ++ + +I CKN
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL-DLGGWIQGFARRKKLDGSVRV 368
+ AL LF +M + + P+ V S++ + + G D ++G +RK
Sbjct: 192 HVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK-------- 242
Query: 369 STALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ + ++NALI+ F G+ +A E++ MIR
Sbjct: 243 ------------------------IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
PN T +++ G VDE R+ F ME G P + Y +++ + +D+A
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 489 LIQTMP---FDANGIILSSFLFACGHFKDVSRAERVLRETV 526
+ M N I ++ + G + A+ V V
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 122/279 (43%), Gaps = 15/279 (5%)
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
Q +EAL LF M+ S + P+ + +L +A + D+ + + + +
Sbjct: 52 QFNEALDLFTHMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTC 110
Query: 370 TALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIR 425
L++ + + + A +M E + ++ +LINGF + R +EA+ + M+
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDE 485
G +P+ + ++ + G V+ F ME +GI P + Y +V+ L +G +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 486 AENLIQTM---PFDANGIILSSFLFAC---GHFKDVSRAERVLRETVKME-KECAGDYVL 538
A++L++ M + I ++ + A G F D AE + E ++M Y
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD---AEELYNEMIRMSIAPNIFTYTS 287
Query: 539 LRNLYATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDG 577
L N + E + + ++M+ +G + +V ++G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 160/346 (46%), Gaps = 32/346 (9%)
Query: 164 KNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE----RSRVSWTAVIVGYTRCGDMS 219
+ G D+Y T +VD + K G++ ARK F+EM E + V++TA+I Y + +S
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570
Query: 220 EARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYC 275
A +LF+ M ++ ++ +IDG+ K G ++ A +F++M C
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM---------------C 615
Query: 276 QNGDVESARLMF----DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNE 331
+ DV + F D N+ T+ A++ G CK+ + EA KL M M EPN+
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CEPNQ 674
Query: 332 VTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEE 391
+ +++ + +G LD ++ ++ ++LID Y K A + +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734
Query: 392 MPEKETAS----WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
M E A + +I+G G+ EA ++ +MM +G +PN +T ++ G
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
++ + M G+AP Y ++D + G LD A NL++ M
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 140/326 (42%), Gaps = 39/326 (11%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M+M +P + AL+ G E EV ++GF LY ++L+D Y K
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 187 LGSARKVFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNV 238
A KV +M E S V +T +I G + G EA KL +M E+ +V +
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
MIDG+ +G ++ +L ++M K N +++ ++ C+NG ++ A + + M + +
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTH 844
Query: 295 LFTWNAMIGGHCK-----NKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVAD------ 343
W G+ K NK+ E+L L E+ + + LSV + D
Sbjct: 845 ---WPTHTAGYRKVIEGFNKEFIESLGLLDEI-----GQDDTAPFLSVYRLLIDNLIKAQ 896
Query: 344 --LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ET 397
AL L + F+ L +LI+ ++ A LF EM +K E
Sbjct: 897 RLEMALRLLEEVATFS--ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEM 954
Query: 398 ASWNALINGFAVNGRAKEALEVFEMM 423
S+ +LI G N + EAL + + +
Sbjct: 955 QSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 37/310 (11%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+TAL+ E+ + G ++ +AL+D + K G + A ++
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 194 FDEM-------------------SERSR-VSWTAVIVGYTRCGDMSEARKLFDVMP---- 229
F+ M SER V++ A++ G+ + + EARKL D M
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 230 ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGY--CQNGDVESA 283
E + ++ +IDG K+G +D AQ++ +M + + +++S++ Y + D+ S
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 284 RL--MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
L M + N+ + MI G CK + EA KL +M+ +PN VT +++
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGF 789
Query: 342 ADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KET 397
+G ++ + K + + LID K G + A L EEM + T
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 398 ASWNALINGF 407
A + +I GF
Sbjct: 850 AGYRKVIEGF 859
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 162/430 (37%), Gaps = 55/430 (12%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M++ + G T RE L + V +N F D T L+ +
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTL--VETEN-FVPDTVFYTKLISGLCEA 315
Query: 185 GVLGSARKVFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVM------PERDVA 234
+ A + M S V+++ ++ G + +++ ++M P +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI- 374
Query: 235 AFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLM 290
FN ++ Y G A L KM + + ++ C + D + L+ DL
Sbjct: 375 -FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL-DLA 432
Query: 291 PEK-----------NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
+ N ++ C + +A + REM+ + P+ T VL
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI-PDTSTYSKVLN 491
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----K 395
+ + ++L + +R L V T ++D + K G I +AR F EM E
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
++ ALI+ + + A E+FE M+ EG PN +T ++ G V++ + F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 456 KAMEGFGIAPQIE----------------HYGCMVDLLGRAGCLDEAENLIQTMPFDA-- 497
+ M G P ++ YG ++D ++ ++EA L+ M +
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 498 -NGIILSSFL 506
N I+ + +
Sbjct: 672 PNQIVYDALI 681
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 175/399 (43%), Gaps = 56/399 (14%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M KP + + +++ E E ++ G D V T L+D + K G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 187 LGSARKVFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNV 238
+ +A K F EM R +++TA+I G+ + GDM EA KLF M E D F
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 239 MIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESA----RLMFDLM 290
+I+GY K G M A + + M NV+++T+++ G C+ GD++SA M+ +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 291 PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
+ N+FT+N+++ G CK+ EA+KL +G +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKL--------------------------VGEFEAA 520
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALING 406
G L+ T L+D Y K GE+ +A+ + +EM K ++N L+NG
Sbjct: 521 G----------LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
F ++G ++ ++ M+ +G PN T ++ + +K M G+ P
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
+ Y +V +A + EA L Q M + +S++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 177/379 (46%), Gaps = 25/379 (6%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRV-SWTAVIVGYTR----CGDMSEARKL 224
D V + V FG+L AR+VF++M V S + V TR C + A +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 225 FDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQ 276
F PE +VA++N++I +LG + A L M K +VIS++++V+GYC+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 277 NGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
G+++ + ++M K L + + ++IG C+ + EA + F EM+ + P+ V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTV 352
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM 392
+++ G + + + V TA+I + + G++ A LF EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 393 ----PEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
E ++ ++ LING+ G K+A V MI+ G PN +T ++ G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI---QTMPFDANGIILSSF 505
D M G+ P I Y +V+ L ++G ++EA L+ + +A+ + ++
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 506 LFACGHFKDVSRAERVLRE 524
+ A ++ +A+ +L+E
Sbjct: 533 MDAYCKSGEMDKAQEILKE 551
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 157/377 (41%), Gaps = 71/377 (18%)
Query: 77 VRHARRFFDATHKRD---EFLCNSMITTHF-AIRQFSEPFTLFRDL-CRGTATRTMTMTP 131
+R A +FF H RD + L + I + F I E LF ++ C+G
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---------- 416
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+P TFT L+ G ++ VH ++ G ++ T L+D K G L SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 192 KVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
++ EM + + ++ +++ G + G++ EA KL D + ++D Y
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
K G MD AQ++ +M K ++++ +++G+C +G +E + + M K N
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+N+++ +C A ++++M S V P
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMC-SRGVGP-------------------------- 629
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNG 411
DG + L+ + K + A LF+EM K ++++ LI GF
Sbjct: 630 -------DG--KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 412 RAKEALEVFEMMIREGF 428
+ EA EVF+ M REG
Sbjct: 681 KFLEAREVFDQMRREGL 697
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 175/399 (43%), Gaps = 56/399 (14%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M KP + + +++ E E ++ G D V T L+D + K G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 187 LGSARKVFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVM----PERDVAAFNV 238
+ +A K F EM R +++TA+I G+ + GDM EA KLF M E D F
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 239 MIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESA----RLMFDLM 290
+I+GY K G M A + + M NV+++T+++ G C+ GD++SA M+ +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 291 PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
+ N+FT+N+++ G CK+ EA+KL +G +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKL--------------------------VGEFEAA 520
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALING 406
G L+ T L+D Y K GE+ +A+ + +EM K ++N L+NG
Sbjct: 521 G----------LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
F ++G ++ ++ M+ +G PN T ++ + +K M G+ P
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF 505
+ Y +V +A + EA L Q M + +S++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 177/379 (46%), Gaps = 25/379 (6%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSERSRV-SWTAVIVGYTR----CGDMSEARKL 224
D V + V FG+L AR+VF++M V S + V TR C + A +
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 225 FDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQ 276
F PE +VA++N++I +LG + A L M K +VIS++++V+GYC+
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 277 NGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
G+++ + ++M K L + + ++IG C+ + EA + F EM+ + P+ V
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG-ILPDTV 352
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM 392
+++ G + + + V TA+I + + G++ A LF EM
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 393 ----PEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
E ++ ++ LING+ G K+A V MI+ G PN +T ++ G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI---QTMPFDANGIILSSF 505
D M G+ P I Y +V+ L ++G ++EA L+ + +A+ + ++
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 506 LFACGHFKDVSRAERVLRE 524
+ A ++ +A+ +L+E
Sbjct: 533 MDAYCKSGEMDKAQEILKE 551
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 157/377 (41%), Gaps = 71/377 (18%)
Query: 77 VRHARRFFDATHKRD---EFLCNSMITTHF-AIRQFSEPFTLFRDL-CRGTATRTMTMTP 131
+R A +FF H RD + L + I + F I E LF ++ C+G
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG---------- 416
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+P TFT L+ G ++ VH ++ G ++ T L+D K G L SA
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 192 KVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
++ EM + + ++ +++ G + G++ EA KL D + ++D Y
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
K G MD AQ++ +M K ++++ +++G+C +G +E + + M K N
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+N+++ +C A ++++M S V P
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMC-SRGVGP-------------------------- 629
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNG 411
DG + L+ + K + A LF+EM K ++++ LI GF
Sbjct: 630 -------DG--KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 412 RAKEALEVFEMMIREGF 428
+ EA EVF+ M REG
Sbjct: 681 KFLEAREVFDQMRREGL 697
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 195/445 (43%), Gaps = 40/445 (8%)
Query: 61 ASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCR 120
+S+ +R + + +R D + F+ N++I + R+F E LF
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFD---- 391
Query: 121 GTATRTMTMTPFKPGGHTFTALVKGCTACMATREG-----LEVHGVAVKNGFCLDLYVAT 175
M +P T++ L+ M R G L G V G L +Y
Sbjct: 392 -----RMGKIGLRPNDVTYSILID-----MFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 176 ALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER 231
+L++ + KFG + +A EM E + V++T+++ GY G +++A +L+ M +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 232 DVA----AFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESA 283
+A F ++ G + G + A LF++M + NV +++ M+ GYC+ GD+ A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 284 RLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
M EK + +++ +I G C Q EA K+F + L + E NE+ +L
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLH 620
Query: 340 AVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK---- 395
G L+ + ++ +D + LID K + L +EM ++
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 396 ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
+ + ++I+ + G KEA ++++MI EG PNE+T V++ G V+E
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 456 KAMEGFGIAPQIEHYGCMVDLLGRA 480
M+ P YGC +D+L +
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKG 765
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 156/364 (42%), Gaps = 56/364 (15%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F P ++LV+G E L + V G +L+V AL+D K A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 192 KVFDEMSE----RSRVSWTAVIVGYTRCGDMSEAR----KLFDVMPERDVAAFNVMIDGY 243
+FD M + + V+++ +I + R G + A ++ D + V +N +I+G+
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 244 VKLGCMDMAQ----DLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
K G + A+ ++ +K + V+++TS++ GYC G + A ++ M K ++
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+T+ ++ G + +A+KLF EM +V+PN VT
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTY--------------------- 545
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNG 411
+I+ Y + G++ +A +EM EK +T S+ LI+G + G
Sbjct: 546 --------------NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
+A EA + + + NEI G+L G ++E + M G+ + YG
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 472 CMVD 475
++D
Sbjct: 652 VLID 655
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
+T P T +AL+ G +E+ V G D+Y+ T ++ +
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 187 LGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLF------DVMPERDVAAF 236
L A+++ M + + V + +I G + + EA + D+ P DV +
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP--DVVTY 300
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESA----RLMFD 288
++ G K+ ++ ++ D+M + + +S+V G + G +E A + + D
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 289 LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
NLF +NA+I CK ++ HEA LF M + PN+VT S+L
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM-GKIGLRPNDVTY-SIL---------- 408
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFA 408
I F RR KLD ++ ++D K +N+LING
Sbjct: 409 ----IDMFCRRGKLDTALSFLGEMVDTGLKL----------------SVYPYNSLINGHC 448
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
G A MI + P +T ++ G +++ R + M G GIAP I
Sbjct: 449 KFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIY 508
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTM 493
+ ++ L RAG + +A L M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEM 533
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 147/355 (41%), Gaps = 23/355 (6%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
KP T+ +++G + E + G D Y L+ G A+
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 193 VFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYV 244
D + E + + +T ++ G+ R G + EA + M +R D+ + V+IDG +
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 245 KLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEK----NLF 296
K + L +M D+ + + +TSM+ + GD + A ++DLM + N
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
T+ A+I G CK +EA L +M +SV PN+VT L + G +D+ ++
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTK-GEVDMQKAVELH 776
Query: 357 -ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM----PEKETASWNALINGFAVNG 411
A K L + LI + + G I A L M + ++ +IN
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
K+A+E++ M +G RP+ + ++ C G + + M G+ P
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
KP +T+++ + +E + + + G + TA+++ K G + A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 192 KVFDEMSERS----RVSWTAVIVGYTRCG-DMSEARKLFDVMPE---RDVAAFNVMIDGY 243
+ +M S +V++ + T+ DM +A +L + + + + A +N++I G+
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 244 VKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEKNL---- 295
+ G ++ A +L +M V I++T+M++ C+ DV+ A +++ M EK +
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
+N +I G C + +A +L EML + N+ +
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 182/394 (46%), Gaps = 26/394 (6%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P TF ++ G E ++ + GF D L++ K G + +A+ +
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 194 FDEMSERSRVSWTAVIVGYTRCGDMSEARKL-------FDVMPERDVAAFNVMIDGYVKL 246
F + + V + +I G+ G + +A+ + + ++P DV +N +I GY K
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP--DVCTYNSLIYGYWKE 402
Query: 247 GCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMP----EKNLFTW 298
G + +A ++ MR+K NV S+T +V G+C+ G ++ A + + M + N +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N +I CK + EA+++FREM +P+ T S++ + ++ + W+
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREM-PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM-----PEKETASWNALINGFAVNGRA 413
+ + + LI+ + + GEI AR L EM P E ++N+LI G G
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEV 580
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCM 473
+A +FE M+R+G P+ I+ +++ G+V+E K M G P I + +
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 474 VDLLGRAGCLDEAENLIQTMPFDANGIILSSFLF 507
++ L RAG +++ + + + A GI + F
Sbjct: 641 INGLCRAGRIEDGLTMFRKL--QAEGIPPDTVTF 672
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 168/359 (46%), Gaps = 21/359 (5%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F+P TFT+L+ G + + + + GF ++ T L+ K L A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 192 KVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLF-DVMPER---DVAAFNVMIDGY 243
++F++M S + V++ A++ G G +A L D+M R +V F +ID +
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 244 VKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
VK+G + A++L++ M +V ++ S+++G C G ++ AR MF LM N
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+ +I G CK+K+ + +K+F EM V N +T ++ +G D+ +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNG 411
++ +R L+D G++ +A ++FE M ++E ++ +I G G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHY 470
+ ++A ++F + +G +PN IT ++S GL+ E FK M+ G P Y
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 119/239 (49%), Gaps = 17/239 (7%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M +P TFTAL+ E E++ V ++ D++ +L++ +
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAA----F 236
G+L AR++F M + V +T +I G+ + + + K+F M ++ V A +
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPE 292
V+I GY +G D+AQ++F++M + ++ ++ ++ G C NG VE A ++F+ M +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 293 K----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
+ N+ T+ +I G CK + +A LF L S ++PN +T +++ G +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCS-LFSKGMKPNVITYTTMISGFCRRGLI 484
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 186/411 (45%), Gaps = 35/411 (8%)
Query: 114 LFRDLCRGTATRT-------MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNG 166
L + LCR R M P TFT +++G L + V+ G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 167 FCLDLYVATALVDMYVKFGVLGSARKVFDEMSERS-----RVSWTAVIVGYTRCGDMSEA 221
+V + K G + A EMS + + ++ ++ G + G + A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 222 RKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKM--RD--KNVISWTSMVSG 273
++ DVM + DV +N +I G KLG + A ++ D+M RD N +++ +++S
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 274 YCQNGDVESARLMFDLMPEKNLF----TWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C+ VE A + ++ K + T+N++I G C + A++LF EM S EP
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEP 433
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG---SVRVSTALIDMYAKCGEIGRAR 386
+E T ++ ++ G LD ++ +L G SV LID + K + A
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEA---LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 387 LLFEEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
+F+EM + + ++N LI+G + R ++A ++ + MI EG +P++ T +L+
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 443 NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G + + +AM G P I YG ++ L +AG ++ A L++++
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 109/279 (39%), Gaps = 58/279 (20%)
Query: 113 TLFRDLCRGTAT-------RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKN 165
TL LC+ R +T P TF +L++G R +E+
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEA 221
G D + L+D G L A + +M RS +++ +I G+ + EA
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 222 RKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSMVSG 273
++FD M R+ +N +IDG K ++ A L D+M + + ++ S+++
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 274 YCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCK-------------------NKQ 310
+C+ GD++ A + M E ++ T+ +I G CK N
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLT 609
Query: 311 PH----------------EALKLFREMLMSASVEPNEVT 333
PH EA+ LFREML P+ V+
Sbjct: 610 PHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 648
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 185/402 (46%), Gaps = 27/402 (6%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
+ ++ G T ++GL V + GF + L+++Y K G + A +V M
Sbjct: 452 YHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMK 511
Query: 199 E----RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMD 250
E + +++ +I G+ + D + A +F+ M + DV +N +I + +G MD
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 251 MAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFTWNAMI 302
A +M+ ++ ++ GY ++GD+ + +FD+M + T+N +I
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 303 GGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK- 361
G + +Q +A+++ EM + A V NE T ++ A +G D G + F R +
Sbjct: 632 NGLVEKRQMEKAVEILDEMTL-AGVSANEHTYTKIMQGYASVG--DTGKAFEYFTRLQNE 688
Query: 362 -LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETAS----WNALINGFAVNGRAKEA 416
LD + AL+ K G + A + +EM + +N LI+G+A G EA
Sbjct: 689 GLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEA 748
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
++ + M +EG +P+ T +SAC+ G ++ + + ME G+ P I+ Y ++
Sbjct: 749 ADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG 808
Query: 477 LGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRA 518
RA ++A + + M A GI ++ C +SRA
Sbjct: 809 WARASLPEKALSCYEEM--KAMGIKPDKAVYHCLLTSLLSRA 848
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 181/452 (40%), Gaps = 65/452 (14%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P +T+L+ E L + G + L + +V + K G +A
Sbjct: 342 PTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYW 401
Query: 194 FDEMSERSRVSWTAVIVG---YTRCG--DMSEARKLFDVMPER----DVAAFNVMIDGYV 244
FDE ++R + A I G Y C +M A L M E +A ++ M+DGY
Sbjct: 402 FDE-AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 460
Query: 245 KLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDV----ESARLMFDLMPEKNLF 296
+ +F ++++ V+++ +++ Y + G + E +R+M + + NL
Sbjct: 461 MVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLK 520
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
T++ MI G K K A +F +M+ ++P+ + +++ A +G +D IQ
Sbjct: 521 TYSMMINGFVKLKDWANAFAVFEDMVKEG-MKPDVILYNNIISAFCGMGNMDRA--IQTV 577
Query: 357 ARRKKLD--GSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALINGFAVN 410
+KL + R +I YAK G++ R+ +F+ M ++N LING
Sbjct: 578 KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK 637
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGV-------------------------------- 438
+ ++A+E+ + M G NE T +
Sbjct: 638 RQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 439 ---LSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPF 495
L AC G + K M I Y ++D R G + EA +LIQ M
Sbjct: 698 EALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKK 757
Query: 496 DA---NGIILSSFLFACGHFKDVSRAERVLRE 524
+ + +SF+ AC D++RA + + E
Sbjct: 758 EGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 136/322 (42%), Gaps = 50/322 (15%)
Query: 177 LVDMYVKFGVLGSARKVFDEMSER-----SRVSWTAVIVGYTRCGDMSEA----RKLFDV 227
+V Y + G + AR+ F+ M R SR+ +T++I Y DM EA RK+ +
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRI-YTSLIHAYAVGRDMDEALSCVRKMKEE 373
Query: 228 MPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMF 287
E + ++V++ G+ K G + A FD E+ R+
Sbjct: 374 GIEMSLVTYSVIVGGFSKAGHAEAADYWFD-----------------------EAKRIHK 410
Query: 288 DLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV--TLLSVLPAVADLG 345
L N + +I HC+ A L REM P + T++ VAD
Sbjct: 411 TL----NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD-- 464
Query: 346 ALDLGGWIQGFARRKKLDGSVRVST--ALIDMYAKCGEIGRA----RLLFEEMPEKETAS 399
+ G + F R K+ + V T LI++Y K G+I +A R++ EE + +
Sbjct: 465 --EKKGLVV-FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
++ +INGF A VFE M++EG +P+ I ++SA G +D + K M+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 460 GFGIAPQIEHYGCMVDLLGRAG 481
P + ++ ++G
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSG 603
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
MT+ HT+T +++G + T + E G +D++ AL+ K G
Sbjct: 650 MTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 187 LGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
+ SA V EMS R+ +P R+ +N++IDG+ +
Sbjct: 710 MQSALAVTKEMSARN--------------------------IP-RNSFVYNILIDGWARR 742
Query: 247 GCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMP----EKNLFTW 298
G + A DL +M+ + ++ ++TS +S + GD+ A + M + N+ T+
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAV 341
+I G + P +AL + EM + ++P++ +L ++
Sbjct: 803 TTLIKGWARASLPEKALSCYEEM-KAMGIKPDKAVYHCLLTSL 844
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 256 FDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLM------PEKNLFTWNAMIGGHCKNK 309
F+K+ + + MV Y + GD+ AR F+ M P ++T ++I + +
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT--SLIHAYAVGR 358
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
EAL R+M +E + VT ++ + G + + F K++ ++ S
Sbjct: 359 DMDEALSCVRKM-KEEGIEMSLVTYSVIVGGFSKAGHAEAADYW--FDEAKRIHKTLNAS 415
Query: 370 TALIDMYAKCG--EIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMM 423
+YA C + RA L EM E+ A ++ +++G+ + K+ L VF+ +
Sbjct: 416 IYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL 475
Query: 424 IREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
GF P +T +++ G + + + M+ G+ ++ Y M++
Sbjct: 476 KECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 189/426 (44%), Gaps = 64/426 (15%)
Query: 127 MTMTPFKPGGHTFTALVKGC---------------TACMATREGLEVHGVAVKNGFC--- 168
M + ++P TF L+ G + L +G V NG C
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV-NGLCKRG 234
Query: 169 ------------------LDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWT 206
D+ + T ++D + + A +F EM + + V++
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 207 AVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKM--- 259
++I G S+A +L M ER +V F+ +ID +VK G + A+ L+D+M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 260 -RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEA 314
D ++ +++S+++G+C + ++ A+ MF+LM K N+ T+N +I G CK K+ E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG---SVRVSTA 371
++LFREM V N VT +++ + G D+ Q ++ DG + +
Sbjct: 415 MELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMA---QKIFKKMVSDGVPPDIITYSI 470
Query: 372 LIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIREG 427
L+D K G++ +A ++FE + E + ++N +I G G+ ++ ++F + +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
+PN I ++S GL +E F+ M+ G P Y ++ R G +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 488 NLIQTM 493
LI+ M
Sbjct: 591 ELIKEM 596
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 21/348 (6%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLF 225
DLY L++ + + L A V +M E V+ ++++ GY +SEA L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 226 DVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQN 277
D M + + FN +I G A L D+M + ++ ++ ++V+G C+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 278 GDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
GD++ A + M E ++ + +I C K ++AL LF EM + + PN VT
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVT 292
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
S++ + + G + +K++ +V +ALID + K G++ A L++EM
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 394 EK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
++ + ++++LINGF ++ R EA +FE+MI + PN +T ++ V+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
EG F+ M G+ Y ++ L +AG D A+ + + M D
Sbjct: 413 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 162/352 (46%), Gaps = 21/352 (5%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIV 210
L V G +K G+ D+ ++L++ Y + A + D+M + + V++ +I
Sbjct: 134 ALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIH 193
Query: 211 GYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DK 262
G SEA L D M R D+ + +++G K G +D+A L KM +
Sbjct: 194 GLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLF 318
+V+ +T+++ C +V A +F M K N+ T+N++I C + +A +L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
+M+ + PN VT +++ A G L + ++ +D + ++LI+ +
Sbjct: 314 SDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 379 CGEIGRARLLFEEMPEKE----TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
+ A+ +FE M K+ ++N LI GF R +E +E+F M + G N +T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
++ G D ++ FK M G+ P I Y ++D L + G L++A
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 181/421 (42%), Gaps = 68/421 (16%)
Query: 69 RRNEAVSIVRHARRFFDATHKRDEFLCNSMITTHFAIRQFSEPFTLF-RDLCRGTATRTM 127
R +EAV++V + F ++ + N++I F + SE L R + RG
Sbjct: 165 RISEAVALVD---QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGC----- 216
Query: 128 TMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVL 187
+P T+ +V G L + K D+ + T ++D + +
Sbjct: 217 -----QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 188 GSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVM 239
A +F EM + + V++ ++I G S+A +L M ER +V F+ +
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 240 IDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK-- 293
ID +VK G + A+ L+D+M D ++ +++S+++G+C + ++ A+ MF+LM K
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 294 --NLFTWNAMIGGHCKNKQPHEALKLFREM------------------------------ 321
N+ T+N +I G CK K+ E ++LFREM
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 322 ----LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
++S V P+ +T +L + G L+ + + ++ K++ + +I+
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 378 KCGEIGRARLLFEEMPEKETAS----WNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
K G++ LF + K + +I+GF G +EA +F M +G PN
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 434 T 434
T
Sbjct: 572 T 572
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 212/492 (43%), Gaps = 79/492 (16%)
Query: 37 IHAFMLRNSVDNNLNLLAKF--------ITTCASIA---VSTSRRNEAVSIVRHARRFFD 85
I+ F R+ + L +LAK I T +S+ + R ++AV++V + +
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD---QMVE 181
Query: 86 ATHKRDEFLCNSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKG 145
+K D F ++I F + SE L M +P T+ +V G
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVAL---------VDQMVQRGCQPDLVTYGTVVNG 232
Query: 146 CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----S 201
L + K D+ + ++D K+ + A +F EM +
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 202 RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFD 257
+++++I G S+A +L M ER +V F+ +ID +VK G + A+ L+D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 258 KMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNK 309
+M D ++ +++S+++G+C + ++ A+ MF+LM K N+ T++ +I G CK K
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 310 QPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVS 369
+ E ++LFREM ++ L G+
Sbjct: 413 RVEEGMELFREM------------------------------------SQRGLVGNTVTY 436
Query: 370 TALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIR 425
T LI + + + A+++F++M ++N L++G NG+ +A+ VFE + R
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 426 EGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDE 485
P+ T ++ G V++G F + G++P + Y M+ R G +E
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 486 AENLIQTMPFDA 497
A++L++ M D
Sbjct: 557 ADSLLKKMKEDG 568
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 175/397 (44%), Gaps = 72/397 (18%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGV---AVKNGFCLDLYVATALVDMY 181
+ ++ KP +T+ ++ A + R+ V GV K+G + T L+++
Sbjct: 248 KEFSVKGIKPEAYTYNTII---NAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 182 VKFGVLGSARKVFDEMSERSRVS----WTAVIVGYTRCGDMSEARKLFDVMPERDVA--- 234
VK G + A K+FDEM ER S +T++I R G+M A LFD + E+ ++
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 235 -AFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDL 289
+ +IDG K+G M A+ L ++M+ K V + + +++ GYC+ G V+ A +++D+
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 290 MPEK----NLFTWNAMIGGHCKNKQPHEALK-LFREMLMSASVEPNEVTLLSVLPAVADL 344
M +K ++FT N + + K+ EA + LFR M
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM----------------------- 461
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTA----LIDMYAKCGEIGRARLLFEEMPEK----E 396
+G V++ST LID+Y K G + A+ LF EM K
Sbjct: 462 ------------------EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503
Query: 397 TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFK 456
++N +I + G+ KEA ++ M G P+ T ++ VDE R F
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 563
Query: 457 AMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
M G+ Y M+ L +AG DEA L M
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 156/382 (40%), Gaps = 67/382 (17%)
Query: 154 EGLEVHGVAVKNGFCLD-----LYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAV 208
EGL V VK G +D +++ A + L R++ D + + S T V
Sbjct: 172 EGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDL-CLEIFRRMVDSGVKITVYSLTIV 230
Query: 209 IVGYTRCGDMSEARKLFD------VMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK 262
+ G R G++ +++KL + PE +N +I+ YVK + + M+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPE--AYTYNTIINAYVKQRDFSGVEGVLKVMKKD 288
Query: 263 ----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEA 314
N +++T ++ +NG + A +FD M E+ ++ + ++I +C+ A
Sbjct: 289 GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA 348
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
LF E+ K L S ALID
Sbjct: 349 FLLFDELT------------------------------------EKGLSPSSYTYGALID 372
Query: 375 MYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
K GE+G A +L EM K +N LI+G+ G EA ++++M ++GF+
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 431 NEITMIGVLSACNHCGLVDEGRR-CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENL 489
+ T + S N DE ++ F+ MEG G+ Y ++D+ + G ++EA+ L
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 490 IQTMP---FDANGIILSSFLFA 508
M N I + ++A
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYA 513
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 179/365 (49%), Gaps = 39/365 (10%)
Query: 132 FKPGGHTFTALVKGCTACMATREG--LEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
++P TF +L+ G C+ R G + + VK+G+ ++ V L+D K G L
Sbjct: 137 YEPSIVTFGSLLHG--FCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNI 194
Query: 190 ARKVFDEMSERSR----VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMID 241
A ++ +EM ++ V++ ++ G G S+A ++ M +R DV F +ID
Sbjct: 195 ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALID 254
Query: 242 GYVKLGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK---- 293
+VK G +D AQ+L+ +M D N +++ S+++G C +G + A+ FDLM K
Sbjct: 255 VFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG----ALDL 349
N+ T+N +I G CK + E +KLF+ M + T +++ +G ALD+
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRM-SCEGFNADIFTYNTLIHGYCQVGKLRVALDI 373
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKC--GEIGRARLLFEEMPEKE----TASWNAL 403
W+ +RR D + T I ++ C GEI A + F++M E E ++N +
Sbjct: 374 FCWM--VSRRVTPD----IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIM 427
Query: 404 INGFAVNGRAKEALEVFEMMIREGFRPNEITM-IGVLSACNHCGLVDEGRRCFKAMEGFG 462
I+G + ++A E+F + EG +P+ T I +L C + G E + M+ G
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN-GPRREADELIRRMKEEG 486
Query: 463 IAPQI 467
I Q+
Sbjct: 487 IICQM 491
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 161/352 (45%), Gaps = 21/352 (5%)
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEA 221
G DLY T L+ + + L A V +M E S V++ +++ G+ + +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 222 RKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSG 273
L +M E +V +N +IDG K G +++A +L ++M K +V+++ ++++G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 274 YCQNGD-VESARLMFDLMPEK---NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C +G ++AR++ D+M ++ T+ A+I K EA +L++EM+ S SV+P
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-SVDP 279
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
N VT S++ + G L K +V LI + K + LF
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 390 EEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+ M + ++N LI+G+ G+ + AL++F M+ P+ IT +L
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
G ++ F M I Y M+ L +A +++A L +P +
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 131/268 (48%), Gaps = 15/268 (5%)
Query: 219 SEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSMVSGY 274
S+ +L+ + D+ +F ++I + + + A + KM + +++++ S++ G+
Sbjct: 94 SQKMELYGI--SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 275 CQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
C + A + LM E N+ +N +I G CKN + + AL+L EM + +
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGAD 210
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
VT ++L + G + ++ ++ V TALID++ K G + A+ L++
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 391 EMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
EM + ++N++ING ++GR +A + F++M +G PN +T ++S
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMV 474
+VDEG + F+ M G I Y ++
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLI 358
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 196/447 (43%), Gaps = 36/447 (8%)
Query: 82 RFFDATHKRDEF-----LCNSMITTHFAIRQFS-----EPFTLFRDLCRG-TATRTMTMT 130
R F A K ++ LC M A ++ F R LC +A +
Sbjct: 93 RLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL 152
Query: 131 PFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLG 188
++P TF+ L+ G C+ R E LE+ V+ G DL LV+ G
Sbjct: 153 GYEPNTITFSTLING--LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 189 SARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMI 240
A + D+M E + V++ V+ + G + A +L M ER D ++++I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 241 DGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK-- 293
DG K G +D A +LF++M K N+I++ ++ G+C G + A+L+ D++ K
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 294 -NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGW 352
N+ T++ +I K + EA +L +EM+ + P+ +T S++ LD
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 353 IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFA 408
+ K D ++R LI+ Y K I LF +M + +T ++N LI GF
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 409 VNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIE 468
G+ A E+F+ M+ PN +T +L G ++ F+ +E + I
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 469 HYGCMVDLLGRAGCLDEAENLIQTMPF 495
Y ++ + A +D+A +L ++P
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPL 536
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 121/308 (39%), Gaps = 73/308 (23%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
R M P TF+ L+ RE E+H + G D T+L+D + K
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAA----F 236
L A ++ D M + + ++ +I GY + + + +LF M R V A +
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPE 292
N +I G+ +LG +++A++LF +M + N++++ ++ G C NG+ E A +F+ + +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 293 K--------------------------NLF-------------TWNAMIGGHCKNKQPHE 313
+LF T+N MIGG CK E
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 314 ALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL-DGSVRVSTAL 372
A LFR+M D A D GW R L DG S L
Sbjct: 562 AELLFRKM-------------------EEDGHAPD--GWTYNILIRAHLGDGDATKSVKL 600
Query: 373 IDMYAKCG 380
I+ +CG
Sbjct: 601 IEELKRCG 608
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 144/371 (38%), Gaps = 51/371 (13%)
Query: 230 ERDVAAF---NVMIDGYVKLGCMDM-AQDLFDKMRD-------KNVISWTSMVSGYCQNG 278
ER +AF N+ ++ G +D+ A D D RD VI ++ + S +
Sbjct: 43 ERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTK 102
Query: 279 DVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
+ + M K NL+T + MI C+ ++ A +++ EPN +T
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII-KLGYEPNTITF 161
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE 394
+++ + L+G V + L+D + G +
Sbjct: 162 STLINGLC-------------------LEGRVSEALELVDRMVEMGH------------K 190
Query: 395 KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRC 454
+ + N L+NG ++G+ EA+ + + M+ G +PN +T VL+ G
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 455 FKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKD 514
+ ME I Y ++D L + G LD A NL M + ++ G F +
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 515 VSR---AERVLRETVKME-KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMRGSYKEVAC 570
R ++LR+ +K + + +L + + E + + E++ M RG +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 571 SVIEVDGRFRE 581
+DG +E
Sbjct: 371 YTSLIDGFCKE 381
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 172/358 (48%), Gaps = 32/358 (8%)
Query: 132 FKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
++P T ++L+ G C R + +++ + GF D+ + ++D K G++
Sbjct: 135 YEPDVVTVSSLING--FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 190 ARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD----VAAFNVMID 241
A ++FD M V++ +++ G G S+A +L M RD V F +ID
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 242 GYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK---- 293
+VK G A L+++M D +V ++ S+++G C +G V+ A+ M DLM K
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
++ T+N +I G CK+K+ E KLFREM V + +T +++ G D I
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV-GDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKC--GEIGRARLLFEEMPEKE----TASWNALINGF 407
F+R +D + T I +Y C + +A +LFE M + E ++N +I+G
Sbjct: 372 --FSR---MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAP 465
G ++A ++F + +G +P+ ++ ++S D+ ++ M+ G+ P
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 52/321 (16%)
Query: 204 SWTAVIVGYTRCGD----MSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKM 259
S+ VI RC +S K+ E DV + +I+G+ + + A DL KM
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 260 RD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQP 311
+ +V+ + +++ G C+ G V A +FD M + T+N+++ G C + +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 312 HEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTA 371
+A +L R+M+M + PN +T TA
Sbjct: 226 SDAARLMRDMVMR-DIVPNVITF-----------------------------------TA 249
Query: 372 LIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREG 427
+ID++ K G+ A L+EEM + + ++N+LING ++GR EA ++ ++M+ +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 428 FRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAE 487
P+ +T +++ VDEG + F+ M G+ Y ++ +AG D A+
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 488 NLIQTMPFDANGIILSSFLFA 508
+ M N S L+
Sbjct: 370 EIFSRMDSRPNIRTYSILLYG 390
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 61/266 (22%)
Query: 107 QFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVK 164
+FSE L+ + MT P T+ +L+ G CM R E ++ + V
Sbjct: 259 KFSEAMKLYEE---------MTRRCVDPDVFTYNSLING--LCMHGRVDEAKQMLDLMVT 307
Query: 165 NGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKL 224
G D+ L++ + K + K+F EM++R V
Sbjct: 308 KGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG-------------------- 347
Query: 225 FDVMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK-NVISWTSMVSGYCQNGDVESA 283
D +N +I GY + G D AQ++F +M + N+ +++ ++ G C N VE A
Sbjct: 348 -------DTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 284 RLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLP 339
++F+ M E ++ T+N +I G CK +A LFR L ++P+ V+ ++
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS-LSCKGLKPDVVSYTTM-- 457
Query: 340 AVADLGALDLGGWIQGFARRKKLDGS 365
I GF R+++ D S
Sbjct: 458 -------------ISGFCRKRQWDKS 470
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 189/422 (44%), Gaps = 61/422 (14%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
M T F+P T+ ++K T +E+ + LD + ++D K G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 187 LGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNV 238
L +A +F+EM + + +T +I G+ G + KL M +R DV AF+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEK- 293
+ID +VK G + A++L +M + + +++TS++ G+C+ ++ A M DLM K
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 294 ---NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
N+ T+N +I G+CK + L+LFR+M S+ VAD +
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKM--------------SLRGVVAD--TVTYN 426
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALING 406
IQGF KL+ A+ LF+EM + + S+ L++G
Sbjct: 427 TLIQGFCELGKLE--------------------VAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 407 FAVNGRAKEALEVFEMMIREGFRPN-EITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAP 465
NG ++ALE+FE + + + I I + CN VD+ F ++ G+ P
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK-VDDAWDLFCSLPLKGVKP 525
Query: 466 QIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA---NGIILSSFLFACGHFKDVSRAERVL 522
++ Y M+ L + G L EA+ L + M D NG + + A D +++ +++
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 523 RE 524
E
Sbjct: 586 EE 587
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 179/386 (46%), Gaps = 25/386 (6%)
Query: 132 FKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGS 189
++P TF+ L+ G C+ R E LE+ V+ G L ALV+ G +
Sbjct: 138 YEPDTVTFSTLING--LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 190 ARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMID 241
A + D M E + V++ V+ + G + A +L M ER D ++++ID
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 242 GYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK--- 293
G K G +D A +LF++M K ++I +T+++ G+C G + A+L+ D++ K
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
++ ++A+I K + EA +L +EM+ + P+ VT S++ LD +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAV 409
K ++R LI+ Y K I LF +M + +T ++N LI GF
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 434
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
G+ + A E+F+ M+ RP+ ++ +L G ++ F+ +E + I
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPF 495
Y ++ + A +D+A +L ++P
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPL 520
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 163/346 (47%), Gaps = 55/346 (15%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
M + FK +T L++G C A R +G ++ +K D+ +AL+D +VK
Sbjct: 273 MEIKGFKADIIIYTTLIRG--FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAF 236
G L A ++ EM +R V++T++I G+ + + +A + D+M + ++ F
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPE 292
N++I+GY K +D +LF KM + V +++ +++ G+C+ G +E A+ +F M
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 293 K----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
+ ++ ++ ++ G C N +P +AL++F + +E +++ L D+G +
Sbjct: 451 RRVRPDIVSYKILLDGLCDNGEPEKALEIFEK------IEKSKMEL--------DIGIYN 496
Query: 349 LGGWIQGFARRKKLDGS---------------VRVSTALIDMYAKCGEIGRARLLFEEMP 393
+ I G K+D + V+ +I K G + A LLF +M
Sbjct: 497 I--IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
Query: 394 E----KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
E ++N LI G A ++ ++ E + R GF + T+
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 170/411 (41%), Gaps = 61/411 (14%)
Query: 103 FAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVA 162
F++ ++ + L DLC+ M + +T + ++ C C G
Sbjct: 79 FSVVARTKQYDLVLDLCK-----QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 163 VKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR----VSWTAVIVGYTRCGDM 218
+K G+ D + L++ G + A ++ D M E ++ A++ G G +
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 219 SEARKLFDVMPERDVAAFNVMIDGYVKLGCMD----MAQDLFDKMRDKNV----ISWTSM 270
S+A L D M E V +K+ C +A +L KM ++ + + ++ +
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 271 VSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
+ G C++G +++A +F+ M K ++ + +I G C + + KL R+M+
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI---- 309
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
++K+ V +ALID + K G++ A
Sbjct: 310 --------------------------------KRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 387 LLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSAC 442
L +EM ++ +T ++ +LI+GF + +A + ++M+ +G PN T +++
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 443 NHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
L+D+G F+ M G+ Y ++ G L+ A+ L Q M
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 42/295 (14%)
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
NL+T + MI C+ ++ A +++ EP+ VT +++ +
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKII-KLGYEPDTVTFSTLINGLC----------- 153
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET-ASWNALINGFAVNGR 412
L+G V + L+D EM K T + NAL+NG +NG+
Sbjct: 154 --------LEGRVSEALELVDRMV-------------EMGHKPTLITLNALVNGLCLNGK 192
Query: 413 AKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC 472
+A+ + + M+ GF+PNE+T VL G + ME I Y
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 473 MVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
++D L + G LD A NL M F A+ II ++ + + ++LR+ +K
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK-- 310
Query: 530 KECAGDYVLLRNL---YATEKRWTDVEDVKHMMKMRGSYKEVACSVIEVDGRFRE 581
++ D V L + E + + E++ M RG + +DG +E
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/459 (23%), Positives = 199/459 (43%), Gaps = 33/459 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ L+ ++ E E+ GF +Y +++ K G A++V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 194 FDEMSERSRVS-----WTAVIVGYTRCGDMSEARKLFDVMPERDVAA----FNVMIDGYV 244
F EM RS +S + ++++ + GD+ E K+F M RDV F+ M+ +
Sbjct: 328 FAEML-RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 245 KLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGDVESARLMFDLMPEK----NLF 296
+ G +D A F+ +++ +I +T ++ GYC+ G + A + + M ++ ++
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
T+N ++ G CK K EA KLF EM A + P+ TL ++ LG L +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET----ASWNALINGFAVNGR 412
+ K++ V L+D + K G+I A+ ++ +M KE S++ L+N G
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 413 AKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC 472
EA V++ MI + +P + ++ G +G + M G P Y
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNT 625
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGII-----LSSFLFACGHFKDVSRAERVLRETVK 527
++ R + +A L++ M + G++ +S L + AE VLR+ +
Sbjct: 626 LIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI- 684
Query: 528 MEKECAGD---YVLLRNLYATEKRWTDVEDVKHMMKMRG 563
E+ D Y + N + ++ T+ + M RG
Sbjct: 685 -ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 156/326 (47%), Gaps = 33/326 (10%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P +T L++G + + ++ G +D+ ++ K +LG A K+
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 467
Query: 194 FDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
F+EM+ER+ + T +I G+ + G++ A +LF M E+ DV +N ++DG+ K
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 246 LGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEKNL----FT 297
+G +D A++++ M K + IS++ +V+ C G + A ++D M KN+
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
N+MI G+C++ + + F E ++S P+ ++ +++ G + + F
Sbjct: 588 CNSMIKGYCRSGNASDG-ESFLEKMISEGFVPDCISYNTLI-----YGFVREENMSKAFG 641
Query: 358 RRKKLD-------GSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALING 406
KK++ V +++ + + ++ A ++ +M E+ + +++ +ING
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNE 432
F EA + + M++ GF P++
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 167/407 (41%), Gaps = 29/407 (7%)
Query: 139 FTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS 198
F L++ RE E + GF + + AL+ V+ G + A V+ E+S
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 199 ERSRVS---WTAVIVGYTRC--GDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCM 249
RS V +T I+ C G M + + E+ D+ +N +I Y G M
Sbjct: 228 -RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 250 DMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNL----FTWNAM 301
+ A +L + M K V ++ ++++G C++G E A+ +F M L T+ ++
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
+ CK E K+F +M S V P+ V S++ G LD +
Sbjct: 347 LMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEAL 417
L + T LI Y + G I A L EM ++ + ++N +++G EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLL 477
++F M P+ T+ ++ G + F+ M+ I + Y ++D
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 478 GRAGCLDEAENL------IQTMPFDANGIILSSFLFACGHFKDVSRA 518
G+ G +D A+ + + +P + IL + L + GH + R
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 129/328 (39%), Gaps = 66/328 (20%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVG----YTRCGDMSEARKLFDVMPE 230
+A++ + V+ G L A+ M RS VS ++ ++ CG
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGS------------- 163
Query: 231 RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLM 286
+ + F+++I YV+ + A + F +R K ++ + +++ + G VE A +
Sbjct: 164 -NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 287 FDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVA 342
+ + N++T N M+ CK+ + E + F + V P+ VT
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVYPDIVTY-------- 273
Query: 343 DLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA---- 398
LI Y+ G + A L MP K +
Sbjct: 274 ---------------------------NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
++N +ING +G+ + A EVF M+R G P+ T +L G V E + F M
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 459 EGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
+ P + + M+ L R+G LD+A
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 182/427 (42%), Gaps = 93/427 (21%)
Query: 127 MTMTPFKPGGHTFTALVKG------CTACMAT---------REGLEVHGVAVKNGFC--- 168
M +T ++P TF L+ G + MA + L +GV V NG C
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV-NGLCKRG 235
Query: 169 -LDL-----------------YVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWT 206
DL + ++D K+ + A +F EM + + V+++
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 207 AVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR-- 260
++I G S+A +L M ER DV F+ +ID +VK G + A+ L+D+M
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 261 --DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF----TWNAMIGGHCKNKQPHEA 314
D ++++++S+++G+C + ++ A+ MF+ M K+ F T+N +I G CK K+ E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALID 374
+++FREM ++ L G+ LI
Sbjct: 416 MEVFREM------------------------------------SQRGLVGNTVTYNILIQ 439
Query: 375 MYAKCGEIGRARLLFEEMPE----KETASWNALINGFAVNGRAKEALEVFEMMIREGFRP 430
+ G+ A+ +F+EM ++N L++G NG+ ++A+ VFE + R P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 431 NEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLI 490
T ++ G V++G F + G+ P + Y M+ R G +EA+ L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 491 QTMPFDA 497
+ M D
Sbjct: 560 KEMKEDG 566
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 158/370 (42%), Gaps = 56/370 (15%)
Query: 172 YVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDV 227
Y + L++ + + L A V +M E + V+ ++++ GY +SEA L D
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 228 M----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD 279
M + + FN +I G A L D+M K +++++ +V+G C+ GD
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 280 VESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLL 335
+ A + + M E + +N +I G CK K +AL LF+EM + + PN VT
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYS 295
Query: 336 SVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK 395
S++ + + G + +K++ V +ALID + K G++ A L++EM ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 396 ---------------------------------------ETASWNALINGFAVNGRAKEA 416
+ ++N LI GF R +E
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
+EVF M + G N +T ++ G D + FK M G+ P I Y ++D
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 477 LGRAGCLDEA 486
L + G L++A
Sbjct: 476 LCKNGKLEKA 485
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 174/387 (44%), Gaps = 72/387 (18%)
Query: 142 LVKGCTACMATREGLEVHGVAVKNGFCLDL---------------YVATALVDMYVKFGV 186
+VKGC + T G+ V+G+ + L L + ++D +
Sbjct: 213 VVKGCQPDLVTY-GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 187 LGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNV 238
+ A +F EM + + V++ ++I G S+A +L M ER +V F+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 239 MIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK- 293
+ID +VK G + A+ L+D+M D ++ +++S+++G+C + ++ A+ MF+LM K
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 294 ---NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
N+ T+N +I G CK K+ E ++LFREM
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREM----------------------------- 422
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALING 406
++ L G+ T LI + + E A+++F++M + +++ L++G
Sbjct: 423 -------SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
NG+ + AL VFE + R P+ T ++ G V++G F ++ G+ P
Sbjct: 476 LCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 467 IEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ Y M+ R G +EA+ L + M
Sbjct: 536 VVTYTTMMSGFCRKGLKEEADALFREM 562
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 163/352 (46%), Gaps = 21/352 (5%)
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEA 221
G +LY + L++ + + L A V +M E V+ +++ G+ +S+A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 222 RKLFDVMPE----RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSG 273
L M E D FN +I G + A L D+M K +++++ +V+G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 274 YCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C+ GD++ A + M E + +N +I C K ++AL LF EM + + P
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRP 289
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
N VT S++ + + G + +K++ +V +ALID + K G++ A L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 390 EEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+EM ++ + ++++LINGF ++ R EA +FE+MI + PN +T ++
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
VDEG F+ M G+ Y ++ +A D A+ + + M D
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ L+KG EG+E+ + G + T L+ + + +A+ V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 194 FDEMSERSRV----SWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVK 245
F +M + +++ ++ G G + A +F+ + E D+ +N+MI+G K
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 246 LGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF----T 297
G ++ DLF + K NV+++T+M+SG+C+ G E A +F M E+ T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 298 WNAMIGGHCKNKQPHEALKLFREM 321
+N +I H ++ + +L REM
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREM 597
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 165/357 (46%), Gaps = 18/357 (5%)
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV----SWTAVI 209
EG + V +G D+ T L+ + + G A K+ + + V ++ +I
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 210 VGYTRCGDMSEARKLFDVMP-ERDVAAFNVMIDGYVKLGCMDMAQDLFDKM--RD--KNV 264
GY + G+++ A + D M DV +N ++ G + A ++ D+M RD +V
Sbjct: 180 SGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFRE 320
I++T ++ C++ V A + D M ++ ++ T+N ++ G CK + EA+K +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
M S+ +PN +T +L ++ G + RK SV LI+ + G
Sbjct: 300 M-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 381 EIGRARLLFEEMPE----KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
+GRA + E+MP+ + S+N L++GF + A+E E M+ G P+ +T
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+L+A G V++ + G +P + Y ++D L +AG +A L+ M
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 168/380 (44%), Gaps = 21/380 (5%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ +++ ++ +EV ++ D+ T L++ + +G A K+
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 194 FDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVK 245
DEM +R V++ ++ G + G + EA K + MP + +V N+++
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 246 LG-CMDMAQDLFDKMR---DKNVISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFT 297
G MD + L D +R +V+++ +++ C+ G + A + + MP+ N +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 298 WNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFA 357
+N ++ G CK K+ A++ + E ++S P+ VT ++L A+ G ++ I
Sbjct: 382 YNPLLHGFCKEKKMDRAIE-YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 358 RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNGRA 413
K + +ID AK G+ G+A L +EM K+ T ++++L+ G + G+
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCM 473
EA++ F R G RPN +T ++ D M G P Y +
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 474 VDLLGRAGCLDEAENLIQTM 493
++ L G EA L+ +
Sbjct: 561 IEGLAYEGMAKEALELLNEL 580
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 135/313 (43%), Gaps = 17/313 (5%)
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLF 318
++I T+++ G+C+ G A + +++ ++ T+N MI G+CK + + AL +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
M SV P+ VT ++L ++ D G L + ++ V T LI+ +
Sbjct: 196 DRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 379 CGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
+G A L +EM ++ + ++N L+NG GR EA++ M G +PN IT
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+L + G + + M G +P + + +++ L R G L A ++++ MP
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 495 ---FDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKECAGDYVLLRNLYATEKRWTD 551
N + + L K + RA L V + C D V + +
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV--SRGCYPDIVTYNTMLTALCKDGK 429
Query: 552 VEDVKHMMKMRGS 564
VED ++ S
Sbjct: 430 VEDAVEILNQLSS 442
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 48/282 (17%)
Query: 163 VKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDM 218
++ GF + L++ + G+LG A + ++M + + +S+ ++ G+ + M
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 219 SEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKN----VISWTSM 270
A + + M R D+ +N M+ K G ++ A ++ +++ K +I++ ++
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 455
Query: 271 VSGYCQNGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSAS 326
+ G + G A + D M K+L T+++++GG + + EA+K F E
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMG 514
Query: 327 VEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRAR 386
+ PN VT S++ G + ++ D ++ +I+ K E
Sbjct: 515 IRPNAVTFNSIM---------------LGLCKSRQTDRAIDFLVFMINRGCKPNE----- 554
Query: 387 LLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
S+ LI G A G AKEALE+ + +G
Sbjct: 555 -----------TSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 163/348 (46%), Gaps = 21/348 (6%)
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEA 221
G DLY + ++ + + L A V +M E V+ ++++ GY +S+A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 222 RKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSG 273
L D M E D F +I G A L D+M + +++++ ++V+G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 274 YCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C+ GD++ A + + M + N+ +N +I CK + A+ LF EM + + P
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRP 291
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
N VT S++ + + G + KK++ +V ALID + K G++ A L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 390 EEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
EEM ++ +T ++N LINGF ++ R EA ++F+ M+ + PN T +++ C
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
V++G F+ M G+ Y ++ +AG D A+ + + M
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 188/415 (45%), Gaps = 25/415 (6%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
++P T ++L+ G + + + V+ G+ D + T L+ A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 192 KVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
+ D+M +R V++ V+ G + GD+ A L + M + +V FN +ID
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---NL 295
K +++A DLF +M K NV+++ S+++ C G +++RL+ +++ +K N+
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+NA+I K + EA KL EM+ S++P+ +T ++ LD +
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMI-QRSIDPDTITYNLLINGFCMHNRLDEAKQMFK 387
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNG 411
F K +++ LI+ + KC + LF EM ++ T ++ +I GF G
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVL--SACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
A VF+ M+ P +I +L C++ G +D FK ++ + I
Sbjct: 448 DCDSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSY-GKLDTALVIFKYLQKSEMELNIFI 505
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRE 524
Y M++ + +AG + EA +L ++ + + ++ + + + A+ + R+
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 153/352 (43%), Gaps = 21/352 (5%)
Query: 155 GLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIV 210
L V +K G+ D+ ++L++ Y + A + D+M E ++T +I
Sbjct: 137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIH 196
Query: 211 GYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DK 262
G SEA L D M +R D+ + +++G K G +D+A +L +KM
Sbjct: 197 GLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLF 318
NV+ + +++ C+ VE A +F M K N+ T+N++I C + +A +L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
ML + PN VT +++ A G L + ++ +D LI+ +
Sbjct: 317 SNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCM 375
Query: 379 CGEIGRARLLFEEMPEKE----TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
+ A+ +F+ M K+ ++N LINGF R ++ +E+F M + G N +T
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
++ G D + FK M + I Y ++ L G LD A
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 144/316 (45%), Gaps = 51/316 (16%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLF 225
++ + ++D K+ + A +F EM + + V++ ++I G S+A +L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 226 DVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQN 277
M E+ +V FN +ID + K G + A+ L ++M D + I++ +++G+C +
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 278 GDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREM------------ 321
++ A+ MF M K N+ T+N +I G CK K+ + ++LFREM
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 322 ----------------------LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARR 359
++S V + +T +L + G LD I + ++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 360 KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-ETASWNALINGFAVNGRAKEALE 418
+++ ++ + +I+ K G++G A LF + K + ++N +I+G +EA +
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 419 VFEMMIREGFRPNEIT 434
+F M +G PN T
Sbjct: 557 LFRKMKEDGTLPNSGT 572
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
M P T+ L+ G CM R E ++ V ++ L++ + K
Sbjct: 354 MIQRSIDPDTITYNLLING--FCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAF 236
+ ++F EMS+R + V++T +I G+ + GD A+ +F M D+ +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMF-DLMP 291
++++ G G +D A +F ++ N+ + +M+ G C+ G V A +F L
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI 531
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
+ ++ T+N MI G C + EA LFR+M ++ PN T +++ A
Sbjct: 532 KPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL-PNSGTYNTLIRA 579
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 56/348 (16%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLF 225
++ + + ++D K+ A +F EM + + ++++++I S+A +L
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 226 DVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQN 277
M ER +V FN +ID +VK G + A+ L+D+M D ++ +++S+++G+C +
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 278 GDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
++ A+ MF+LM K N+ T+N +I G CK K+ E ++LFREM
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM------------ 426
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
++ L G+ T LI + + + A+++F++M
Sbjct: 427 ------------------------SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 394 ----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
++N L++G NG+ ++A+ VFE + R P T ++ G V+
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
+G F ++ G+ P + Y M+ R G +EA+ L + M D
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 35/237 (14%)
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
NL+T+N +I C+ Q AL L +M M EP+ VTL S+L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLL--------------- 162
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
G+ K++ +V AL+D + G +T ++ LI+G ++ +A
Sbjct: 163 NGYCHGKRISDAV----ALVDQMVEMGY------------RPDTITFTTLIHGLFLHNKA 206
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCM 473
EA+ + + M++ G +PN +T V++ G +D ME I + Y +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 474 VDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACGHFKDVSRAERVLRETVK 527
+D L + D+A NL M N I SS + +++ S A R+L + ++
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 9/247 (3%)
Query: 313 EALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTAL 372
+A+ LF M+ S + P+ +L A+A + DL + +R + ++ L
Sbjct: 68 DAIGLFGGMVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 373 IDMYAKCGEIGRARLLFEEM----PEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
I+ + + +I A L +M E + ++L+NG+ R +A+ + + M+ G+
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
RP+ IT ++ E M G P + YG +V+ L + G +D A N
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 489 LIQTM---PFDANGIILSSFLFACGHFKDVSRAERVLRETV-KMEKECAGDYVLLRNLYA 544
L+ M +AN +I S+ + + ++ A + E K + Y L +
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 545 TEKRWTD 551
+RW+D
Sbjct: 307 NYERWSD 313
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 195/464 (42%), Gaps = 100/464 (21%)
Query: 132 FKPGGHTFTALVKG------CTACMATREGLEVHGV--------AVKNGFC--------- 168
++P TFT LV G + +A E + V G AV NG C
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 169 ------------LDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGY 212
D+ + + ++D K+ + A +F EM + +++++I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 213 TRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNV 264
G S+A +L M ER +V FN +ID + K G + A+ LFD+M D N+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPEKN----LFTWNAMIGGHCKNKQPHEALKLFRE 320
+++ S+++G+C + ++ A+ +F LM K+ + T+N +I G CK K+ + ++LFR+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
M R+ L G+ T LI + +
Sbjct: 406 M------------------------------------SRRGLVGNTVTYTTLIHGFFQAS 429
Query: 381 EIGRARLLFEEMP----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
+ A+++F++M ++N L++G NG+ ++A+ VFE + + P+ T
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFD 496
+ G V++G F ++ G+ P + Y M+ + G +EA L M D
Sbjct: 490 IMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 497 ANGIILSSFLFAC---GHFKDVSRAERVLRETVKMEKEC--AGD 535
G + S + H +D +A E +K + C AGD
Sbjct: 550 --GPLPDSGTYNTLIRAHLRDGDKAASA--ELIKEMRSCRFAGD 589
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 156/340 (45%), Gaps = 31/340 (9%)
Query: 165 NGFCLDLYV--ATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEAR 222
NGFC + A ALVD V+ G + V++T ++ G + SEA
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGY------------QPDTVTFTTLVHGLFQHNKASEAV 190
Query: 223 KLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGY 274
L + M + D+ + +I+G K G D+A +L +KM + +V+ +++++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 275 CQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
C+ V+ A +F M K ++FT++++I C + +A +L +ML + PN
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML-ERKINPN 309
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
VT S++ A A G L + ++ +D ++ +LI+ + + A+ +F
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 391 EMPEKE----TASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCG 446
M K+ ++N LINGF + + +E+F M R G N +T ++
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 447 LVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
D + FK M G+ P I Y ++D L + G L++A
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 168/364 (46%), Gaps = 27/364 (7%)
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSE----RSRVSWTAVI 209
E +E+ GV+ +LY +++ + L A + +M + S V+ +++
Sbjct: 89 EKMEILGVS------HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLL 142
Query: 210 VGYTRCGDMSEARKLFDVMPE----RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK--- 262
G+ +SEA L D M E D F ++ G + A L ++M K
Sbjct: 143 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ 202
Query: 263 -NVISWTSMVSGYCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKL 317
+++++ ++++G C+ G+ + A + + M E ++ ++ +I CK + +AL L
Sbjct: 203 PDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL 262
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
F EM + + P+ T S++ + + G + +K++ +V +LID +A
Sbjct: 263 FTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 378 KCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
K G++ A LF+EM ++ ++N+LINGF ++ R EA ++F +M+ + P+ +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
T +++ V +G F+ M G+ Y ++ +A D A+ + + M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 494 PFDA 497
D
Sbjct: 442 VSDG 445
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 31/382 (8%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
++F L+KGC + ++ + GF ++ + T L+D K G + A+ +F E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 197 MSERSRV----SWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGC 248
M + V ++T +I G + G + ++++ M E V +N +++ K G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 249 MDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMP----EKNLFTWNA 300
A +FD+MR++ N++++ +++ G C+ + A + D M NL T+N
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I G C + +AL L R+ L S + P+ VT ++ G + +
Sbjct: 344 LIDGFCGVGKLGKALSLCRD-LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRA---RLLFEEM---PEKETASWNALINGFAVNGRAK 414
+ S T LID +A+ + +A RL EE+ P+ T ++ LI+GF + G+
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT--YSVLIHGFCIKGQMN 460
Query: 415 EALEVFEMMIREGFRPNEI---TMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
EA +F+ M+ + PNE+ TMI L C G + K ME +AP + Y
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMI--LGYCKE-GSSYRALKLLKEMEEKELAPNVASYR 517
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
M+++L + EAE L++ M
Sbjct: 518 YMIEVLCKERKSKEAERLVEKM 539
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 21/314 (6%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T+T L+ G ++G E++ ++G +LY +++ K G A +VFDEM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 198 SER----SRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVKLG-- 247
ER + V++ +I G R ++EA K+ D M ++ +N +IDG+ +G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 248 --CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNL----FTWNAM 301
+ + +DL + +++++ +VSG+C+ GD A M M E+ + T+ +
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 302 IGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK 361
I ++ +A++L R + + P+ T ++ G ++ + K
Sbjct: 415 IDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 362 LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNGRAKEAL 417
+ + + +I Y K G RA L +EM EKE AS+ +I ++KEA
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 418 EVFEMMIREGFRPN 431
+ E MI G P+
Sbjct: 534 RLVEKMIDSGIDPS 547
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 130/312 (41%), Gaps = 32/312 (10%)
Query: 205 WTAVIVGYTRCGDMSEARKLFDVMPERDVAA----FNVMIDGYVKLGCMDMAQDLFDKMR 260
+ +I Y + ++ + F+ M + FN ++ V + F++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 261 DK---NVISWTSMVSGYCQNGDVESARLMFDLMPE-------KNLFTWNAMIGGHCKNKQ 310
K +V S+ ++ G C+ G++E + FDL+ E N+ + +I G CK +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKS---FDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 311 PHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKL--DG---S 365
+A LF EM V NE T ++ G G QGF +K+ DG +
Sbjct: 214 IEKAKDLFFEMGKLGLV-ANERTYTVLIN-----GLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFE 421
+ +++ K G A +F+EM E+ ++N LI G + EA +V +
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAG 481
M +G PN IT ++ G + + + ++ G++P + Y +V R G
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 482 CLDEAENLIQTM 493
A +++ M
Sbjct: 388 DTSGAAKMVKEM 399
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 169/384 (44%), Gaps = 63/384 (16%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVA-------VKNGFCLDLYVATALVDMYVKFGVLGS 189
H F ++GC + L G + GF L++YV L++ + K G +
Sbjct: 199 HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISD 258
Query: 190 ARKVFDEMSERSR----VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMID 241
A+KVFDE+++RS VS+ +I GY + G++ E +L M + DV ++ +I+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 242 GYVKLGCMDMAQDLFDKMRDKNVIS----WTSMVSGYCQNGDV----ESARLMFDLMPEK 293
K MD A LFD+M + +I +T+++ G+ +NG++ ES + M +
Sbjct: 319 ALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQP 378
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
++ +N ++ G CKN A + M+ + P+++T
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKITY------------------- 418
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAV 409
T LID + + G++ A + +EM E + ++AL+ G
Sbjct: 419 ----------------TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 410 NGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEH 469
GR +A M+R G +P+++T ++ A G G + K M+ G P +
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 470 YGCMVDLLGRAGCLDEAENLIQTM 493
Y +++ L + G + A+ L+ M
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAM 546
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 166/374 (44%), Gaps = 59/374 (15%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGV 186
+T +P +F L+ G EG + K+ D++ +AL++ K
Sbjct: 266 ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK 325
Query: 187 LGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNV 238
+ A +FDEM +R + V +T +I G++R G++ ++ + M + D+ +N
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESARLMFDLMPEKN 294
+++G+ K G + A+++ D M + + I++T+++ G+C+ GDVE+A + M +
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 295 L----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLG 350
+ ++A++ G CK + +A + REML A ++P++VT
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREML-RAGIKPDDVTY---------------- 488
Query: 351 GWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALING 406
T ++D + K G+ L +EM ++N L+NG
Sbjct: 489 -------------------TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNG 529
Query: 407 FAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQ 466
G+ K A + + M+ G P++IT +L H + +R + E GI
Sbjct: 530 LCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRHANSSKRYIQKPE-IGIVAD 586
Query: 467 IEHYGCMVDLLGRA 480
+ Y +V+ L RA
Sbjct: 587 LASYKSIVNELDRA 600
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 175/352 (49%), Gaps = 27/352 (7%)
Query: 165 NGFCLDLYVATALVDMYVK-------FGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGD 217
NG D+Y T +++ Y + F VLG A K+ E ++++ ++ G+ G
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLG---YEPDTITFSTLVNGFCLEGR 155
Query: 218 MSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTS 269
+SEA L D M E D+ + +I+G G + A L D+M + + +++
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
+++ C++G+ A +F M E+N+ ++ +I CK+ +AL LF EM M
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 326 SVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRA 385
++ + VT S++ + + G D G + + + V +ALID++ K G++ A
Sbjct: 276 -IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 386 RLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
+ L+ EM + +T ++N+LI+GF EA ++F++M+ +G P+ +T ++++
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 442 CNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
VD+G R F+ + G+ P Y +V ++G L+ A+ L Q M
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 64/347 (18%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPE 230
+ ++D K G A +F+EM + V+++++I G G + K+ M
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 231 R----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVES 282
R DV F+ +ID +VK G + A++L+++M + + I++ S++ G+C+ +
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 283 ARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
A MFDLM K ++ T++ +I +CK K+ + ++LFRE + S + PN +T ++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE-ISSKGLIPNTITYNTL- 426
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK--- 395
+ GF + KL+ A+ LF+EM +
Sbjct: 427 --------------VLGFCQSGKLNA--------------------AKELFQEMVSRGVP 452
Query: 396 -ETASWNALINGFAVNGRAKEALEVFEMMIRE----GFRPNEITMIGVLSACNHCGLVDE 450
++ L++G NG +ALE+FE M + G I + G+ +A VD+
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK----VDD 508
Query: 451 GRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
F ++ G+ P + Y M+ L + G L EA+ L + M D
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 160/348 (45%), Gaps = 33/348 (9%)
Query: 165 NGFCLDLYV--ATALVDMYVKFGVLGSARKVFDEMSERSR-VSWTAVIVGYTRCGDMSEA 221
NGFCL+ V A ALVD V EM +R V+ + +I G G +SEA
Sbjct: 148 NGFCLEGRVSEAVALVDRMV-------------EMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 222 RKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKN----VISWTSMVSG 273
L D M E D + +++ K G +A DLF KM ++N V+ ++ ++
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 274 YCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C++G + A +F+ M K ++ T++++IGG C + + + K+ REM+ ++ P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI-GRNIIP 313
Query: 330 NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLF 389
+ VT +++ G L + + + +LID + K + A +F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 390 EEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHC 445
+ M K + +++ LIN + R + + +F + +G PN IT ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 446 GLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G ++ + F+ M G+ P + YG ++D L G L++A + + M
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ +L+ G E ++ + V G D+ + L++ Y K + ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 194 FDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
F E+S + + +++ +++G+ + G ++ A++LF M R V + +++DG
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 246 LGCMDMAQDLFDKMRDKNVI----SWTSMVSGYCQNGDVESARLMFDLMPEK----NLFT 297
G ++ A ++F+KM+ + + ++ G C V+ A +F + +K ++ T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 298 WNAMIGGHCKNKQPHEALKLFREM 321
+N MIGG CK EA LFR+M
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKM 551
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 168/359 (46%), Gaps = 21/359 (5%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
F+P T +L+ G +E + + GF ++ + +++ K L +A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 192 KVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGY 243
+VF M ++ V++ +I G + G ++A +L M +R +V F +ID +
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF--- 296
VK G + A++L+ +M + NV ++ S+++G+C +G + A+ MFDLM K F
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 297 -TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+N +I G CK+K+ + +KLF EM V + T +++ G L++ +
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV-GDAFTYNTLIHGYCQAGKLNVAQKVFN 383
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNG 411
+ + L+D G+I +A ++ E++ + E ++N +I G
Sbjct: 384 RMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTD 443
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHY 470
+ KEA +F + R+G +P+ I I ++S GL E + + M+ G P Y
Sbjct: 444 KLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 121/239 (50%), Gaps = 9/239 (3%)
Query: 263 NVISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFTWNAMIGGHCKNKQPHEALKLF 318
++++ S+++G+CQ + A + D M N+ +N +I G CKN+ + AL++F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 319 REMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAK 378
M + + VT +++ +++ G + ++K+D +V TALID + K
Sbjct: 208 YCM-EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 379 CGEIGRARLLFEEMPEKETA----SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
G + AR L++EM + ++N+LINGF ++G +A +F++M+ +G P+ +T
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 435 MIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+++ V++G + F M G+ Y ++ +AG L+ A+ + M
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 162/377 (42%), Gaps = 56/377 (14%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
++FT L+ C L + G +K GF + +L++ + + A + D
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 197 MSE----RSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLG- 247
M + V + VI G + D++ A ++F M ++ D +N +I G G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 248 ---CMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNA 300
+ +D+ + D NVI +T+++ + + G++ AR ++ M + N+FT+N+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I G C + +A +F ++++S P+ VT ++ I GF + K
Sbjct: 295 LINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTL---------------ITGFCKSK 338
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEA 416
+++ ++ LF EM + + ++N LI+G+ G+ A
Sbjct: 339 RVEDGMK--------------------LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
+VF M+ G P+ +T +L + G +++ + ++ + I Y ++
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 477 LGRAGCLDEAENLIQTM 493
L R L EA L +++
Sbjct: 439 LCRTDKLKEAWCLFRSL 455
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 193/457 (42%), Gaps = 34/457 (7%)
Query: 98 MITTHFAIRQFSEPFTLFRDLCRG-------TATRTMTMTPFKPGGHTFTALVKGCTACM 150
M+ FA ++ L + LCR + R M P ++ +++G
Sbjct: 133 MLKRGFAFNVYNHNI-LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 151 ATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS----ERSRVSWT 206
+ LE+ +G L L+D + K G + A EM E V +T
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 207 AVIVGYTRCGDMSEARKLFDVMPERD----VAAFNVMIDGYVKLGCMDMAQDLFDKMRDK 262
++I G+ CG++ + LFD + ER +N +I G+ KLG + A ++F+ M ++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 263 ----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEA 314
NV ++T ++ G C G + A + +LM EK N T+N +I CK+ +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 315 LKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKK--LDGSVRVSTAL 372
+++ E++ P+ +T +L + G LD + + D V AL
Sbjct: 372 VEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 373 IDMYAKCGEIGRA----RLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGF 428
I K + +A LL E++ + + N L+N G +A+E+++ +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 429 RPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAEN 488
N T ++ G+++ + M + P + Y C++ L + G LD+A
Sbjct: 491 VRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWR 550
Query: 489 LIQTMPFDANGIILSSF-LFACGHFK--DVSRAERVL 522
L + M D N + SF + G K D+ AE +L
Sbjct: 551 LFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 181/425 (42%), Gaps = 31/425 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ L++G +E E+ ++ G ++Y T L+D G A ++
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 194 FDEMSERSR----VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
+ M E+ V++ +I + G +++A ++ ++M +R D +N+++ G
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 246 LGCMDMAQDLFDKM------RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
G +D A L M D +VIS+ +++ G C+ + A ++DL+ EK +
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDR 459
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T N ++ K ++A++L++++ S V N T +++ G L++ +
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVR-NSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNG 411
R +L SV L+ K G + +A LFEEM + S+N +I+G G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
K A + M R G P+ T +++ G +DE F M G P
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 472 CMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFL------FACGHFKDVSRAERVLRET 525
++ G D+ L++ + I+L L + C ++ A+R+LR T
Sbjct: 639 SVLKYCISQGETDKLTELVKKLV--DKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVT 696
Query: 526 VKMEK 530
E+
Sbjct: 697 DDKEE 701
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 188/450 (41%), Gaps = 40/450 (8%)
Query: 31 ITTLLQIHAFMLRNSVDNNLNLLA--KFITTCASIAVSTS--RRNEAVSIVRHARRFFDA 86
+T + I AF +D + L KF+ A + V TS R + + FD
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 87 THKRDEFLC----NSMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTAL 142
+R + C N++I + Q E +F M +P +T+T L
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE---------FMIERGVRPNVYTYTGL 323
Query: 143 VKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER-- 200
+ G T+E L++ + ++ + +++ K G++ A ++ + M +R
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 201 --SRVSWTAVIVGYTRCGDMSEARKLFDVM------PERDVAAFNVMIDGYVKLGCMDMA 252
+++ ++ G GD+ EA KL +M + DV ++N +I G K + A
Sbjct: 384 RPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQA 443
Query: 253 QDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFTWNAMIGG 304
D++D + +K + ++ +++ + GDV A ++ + + +N T+ AMI G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 305 HCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDG 364
CK + A L +M +S ++P+ +L ++ G+LD + +R
Sbjct: 504 FCKTGMLNVAKGLLCKMRVS-ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562
Query: 365 SVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAKEALEVF 420
V +ID K G+I A L M + +++ LIN F G EA+ F
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622
Query: 421 EMMIREGFRPNEITMIGVLSACNHCGLVDE 450
+ M+ GF P+ VL C G D+
Sbjct: 623 DKMVDSGFEPDAHICDSVLKYCISQGETDK 652
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 170/371 (45%), Gaps = 28/371 (7%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T+ L+ G + E HG ++GF + Y L++ Y K G+ A V DEM
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 198 SER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKLGCMDMAQ 253
+ ++ I G + +AR+L M DV ++N ++ GY+K+G A
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 254 DLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF----TWNAMIGGH 305
LFD +R +++++ +++ G C++G++E A+ + + M + +F T+ ++ G
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
KN A +++ EML ++P+ +G L LG + F +++ +
Sbjct: 455 VKNGNLSMATEVYDEMLRKG-IKPDGYAY-----TTRAVGELRLGDSDKAFRLHEEMVAT 508
Query: 366 ------VRVSTALIDMYAKCGEIGRA----RLLFEEMPEKETASWNALINGFAVNGRAKE 415
+ + ID K G + +A R +F + ++ +I G+ NG+ K
Sbjct: 509 DHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
A +++ M+R+ P+ IT ++ G +++ + M+ G+ P + + ++
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 476 LLGRAGCLDEA 486
+ +AG +DEA
Sbjct: 629 GMCKAGNIDEA 639
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 146/351 (41%), Gaps = 57/351 (16%)
Query: 171 LYVATALVDMYV----KFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD 226
+Y T+ ++Y+ FG + AR++ M+ VS+ ++ GY + G EA LFD
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFD 398
Query: 227 VMPERDV----AAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNG 278
+ D+ +N +IDG + G ++ AQ L ++M + +VI++T++V G+ +NG
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNG 458
Query: 279 DVESARLMFDLMPEK----------------------------------------NLFTW 298
++ A ++D M K +L +
Sbjct: 459 NLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIY 518
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N I G CK +A++ F+ + + P+ VT +V+ + G + +
Sbjct: 519 NVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAK 414
RK+L SV LI +AK G + +A EM ++ + NAL+ G G
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAP 465
EA M EG PN+ + ++S +E + +K M I P
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 67/374 (17%)
Query: 218 MSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTS 269
M++A +++ M E V FN M+D K G ++ ++ +M+ +N+ +++
Sbjct: 219 MNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 278
Query: 270 MVSGYCQNGDVESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
+++G+ +NG +E AR M +++N +I G+CK +A + EML +A
Sbjct: 279 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML-NA 337
Query: 326 SVEPNEVTLLSVLPAVADLGALD--------------------LGGWIQ--GFA------ 357
+ P T + A+ D G +D + G+I+ F
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 358 ---RRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVN 410
R + S+ LID + G + A+ L EEM + + ++ L+ GF N
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFG-IAPQIEH 469
G A EV++ M+R+G +P+ G D+ R + M AP +
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 470 YGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVLRETVKME 529
Y +D L + G NL++ + F +F G D V+R ++
Sbjct: 518 YNVRIDGLCKVG------NLVKAIEFQRK-------IFRVGLVPDHVTYTTVIRGYLE-- 562
Query: 530 KECAGDYVLLRNLY 543
G + + RNLY
Sbjct: 563 ---NGQFKMARNLY 573
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 18/218 (8%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAV-KNGFCLDLYVATALVDMYVKFGVLGSA- 190
KP G+ +T G + + +H V + DL + +D K G L A
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535
Query: 191 ---RKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGY 243
RK+F V++T VI GY G AR L+D M + V + V+I G+
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
K G ++ A +M+ + NV++ +++ G C+ G+++ A M E+ N
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
+++ +I +C ++ E +KL++EML +EP+ T
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEML-DKEIEPDGYT 692
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 56/382 (14%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
++P T +LV G + + + V+ G+ D+ A++D K + A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 192 KVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGY 243
F E+ + + V++TA++ G S+A +L M ++ +V ++ ++D +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 244 VKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NL 295
VK G + A++LF++M D ++++++S+++G C + ++ A MFDLM K ++
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
++N +I G CK K+ + +KLFREM V N VT ++ IQG
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS-NTVTYNTL---------------IQG 374
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNG 411
F + G++ +A+ F +M + ++N L+ G NG
Sbjct: 375 FF--------------------QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
++AL +FE M + + +T V+ G V+E F ++ G+ P I Y
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
M+ L G L E E L M
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKM 496
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 165/360 (45%), Gaps = 63/360 (17%)
Query: 150 MATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVI 209
+ R L + + N FC V+ AL +LG K+ E RV+ +++
Sbjct: 114 LGIRNDLYTFNIVI-NCFCCCFQVSLAL-------SILGKMLKL---GYEPDRVTIGSLV 162
Query: 210 VGYTRCGDMSEARKLFDVMPE----RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK--- 262
G+ R +S+A L D M E D+ A+N +ID K ++ A D F ++ K
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Query: 263 -NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---NLFTWNAMIGGHCKNKQPHEALKL 317
NV+++T++V+G C + ++ARL+ D++ +K N+ T++A++ KN + EA +L
Sbjct: 223 PNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 318 FREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYA 377
F EM+ S++P+ VT S+ I G ++D
Sbjct: 283 FEEMV-RMSIDPDIVTYSSL---------------INGLCLHDRID-------------- 312
Query: 378 KCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEI 433
A +F+ M K + S+N LINGF R ++ +++F M + G N +
Sbjct: 313 ------EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 434 TMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
T ++ G VD+ + F M+ FGI+P I Y ++ L G L++A + + M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 138/276 (50%), Gaps = 13/276 (4%)
Query: 232 DVAAFNVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMF 287
D+ FN++I+ + + +A + KM + + ++ S+V+G+C+ V A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 288 DLMPE----KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVAD 343
D M E ++ +NA+I CK K+ ++A F+E + + PN VT +++ + +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCN 237
Query: 344 LGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETAS 399
+ +KK+ +V +AL+D + K G++ A+ LFEEM + + +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 400 WNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAME 459
+++LING ++ R EA ++F++M+ +G + ++ +++ V++G + F+ M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 460 GFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPF 495
G+ Y ++ +AG +D+A+ M F
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF 393
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
M P T+++L+ G C+ R E ++ + V G D+ L++ + K
Sbjct: 286 MVRMSIDPDIVTYSSLING--LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 185 GVLGSARKVFDEMSERSRVS----WTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAF 236
+ K+F EMS+R VS + +I G+ + GD+ +A++ F M D+ +
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTY 403
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPE 292
N+++ G G ++ A +F+ M+ D +++++T+++ G C+ G VE A +F +
Sbjct: 404 NILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Query: 293 KNL----FTWNAMIGGHCKNKQPHEALKLFREM 321
K L T+ M+ G C HE L+ +M
Sbjct: 464 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 193/465 (41%), Gaps = 94/465 (20%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P +T+ +V G E + V+ G D + T+L+ Y + L SA KV
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 194 FDEMS----ERSRVSWTAVIVG----------------------------YT-----RCG 216
F+EM R+ V++T +I G YT CG
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 217 D--MSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVIS 266
SEA L M E ++ + V+ID + A++L +M +K NVI+
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 267 WTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREML 322
+ ++++GYC+ G +E A + +LM + N T+N +I G+CK+ H+A+ + +ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKML 454
Query: 323 MSASVEPNEVTLLSVLPAVADLGALDLG---------------GW-----IQGFARRKK- 361
V P+ VT S++ G D W I + K+
Sbjct: 455 -ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 362 --------------LDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNAL 403
++ +V + TALID Y K G++ A L+ E+M K + ++NAL
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 404 INGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
I+G +G+ KEA + E M++ G +P T ++ G D F+ M G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFA 508
P Y + R G L +AE+++ M NG+ F ++
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYS 676
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 161/362 (44%), Gaps = 24/362 (6%)
Query: 125 RTMTMTPFKPGGHTFTALVKG-CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVK 183
+ M T KP HT+T L+ C+ C + E+ G ++ G ++ AL++ Y K
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 184 FGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAA 235
G++ A V + M R + ++ +I GY + ++ +A + + M ER DV
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVT 464
Query: 236 FNVMIDGYVKLGCMDMAQDLFDKMRDKNVI----SWTSMVSGYCQNGDVESARLMFDLMP 291
+N +IDG + G D A L M D+ ++ ++TSM+ C++ VE A +FD +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 292 EK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
+K N+ + A+I G+CK + EA L E ++S + PN +T +++ + G L
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEA-HLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 348 DLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM----PEKETASWNAL 403
++ + L +V T LI K G+ A F++M + + ++
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTF 643
Query: 404 INGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGI 463
I + GR +A ++ M G P+ T ++ G + K M G
Sbjct: 644 IQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC 703
Query: 464 AP 465
P
Sbjct: 704 EP 705
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 163/357 (45%), Gaps = 22/357 (6%)
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSR----VSWTAVIVGY 212
+V+ +++ C ++Y +V+ Y K G + A + ++ E ++T++I+GY
Sbjct: 204 QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGY 263
Query: 213 TRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNV 264
+ D+ A K+F+ MP R+ A+ +I G +D A DLF KM+D V
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 265 ISWTSMVSGYCQNGDVESARLMFDLMPE----KNLFTWNAMIGGHCKNKQPHEALKLFRE 320
++T ++ C + A + M E N+ T+ +I C + +A +L +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 321 MLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCG 380
ML + PN +T +++ G ++ + +KL + R LI Y K
Sbjct: 384 ML-EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-S 441
Query: 381 EIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
+ +A + +M E+ + ++N+LI+G +G A + +M G P++ T
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYT 501
Query: 437 GVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
++ + V+E F ++E G+ P + Y ++D +AG +DEA +++ M
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/418 (19%), Positives = 159/418 (38%), Gaps = 79/418 (18%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+T+++ E ++ + G ++ + TAL+D Y K G + A +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 194 FDEMSERS----RVSWTAVIVGYTRCGDMSEA----RKLFDVMPERDVAAFNVMIDGYVK 245
++M ++ +++ A+I G G + EA K+ + + V+ ++I +K
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 246 LGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFT 297
G D A F +M + ++T+ + YC+ G + A M M E +LFT
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 298 WNAMIGGH--------------------CKNKQPHEALKLFREML--------------- 322
++++I G+ C+ Q H L L + +L
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ-HTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 323 ------------------MSASVEPNEVTLLSVLPAVADLGALDLGGWI-QGFARRKKLD 363
+ SV PN + ++ + ++G L + + R + +
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 364 GSVRVSTALIDMYAKCGEIGRARLLFEEM------PEKETASWNALINGFAVNGRAKEAL 417
S V AL+ K + A + ++M P+ E S LI G G +
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE--SCKVLICGLYKKGEKERGT 851
Query: 418 EVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
VF+ +++ G+ +E+ ++ GLV+ F ME G + Y +++
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 168/386 (43%), Gaps = 20/386 (5%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+ P T +L+ G E + + V+ G+ D T LV + A
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 192 KVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
+ + M + V++ AVI G + G+ A L + M E DV +N +IDG
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKN----L 295
K MD A DLF+KM K +V ++ ++S C G A + M EKN L
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
+NA+I K + EA KL+ EM+ S P+ V +++ ++ G +
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNG 411
++ L G+ T LI + + + A+++F++M + ++N L++G NG
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
+ AL VFE M + + + +T ++ A G V++G F ++ G+ P + Y
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 472 CMVDLLGRAGCLDEAENLIQTMPFDA 497
M+ R G +EA+ L M D
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 173/411 (42%), Gaps = 58/411 (14%)
Query: 132 FKPGGHTFTALVKG------CTACMATREGLEVHGV--------AVKNGFC--------- 168
++P TFT LV G + +A E + V G AV NG C
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 169 ------------LDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGY 212
D+ + ++D K+ + A +F++M + ++ +I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 213 TRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK-----N 263
G S+A +L M E+ D+ FN +ID +VK G + A+ L+D+M +
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 264 VISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFR 319
V+++ +++ G+C+ VE +F M ++ N T+ +I G + + A +F+
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
+M+ S V P+ +T +L + + G ++ + + +++ + + T +I+ K
Sbjct: 416 QMV-SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 380 GEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITM 435
G++ LF + K ++ +++GF G +EA +F M +G PN T
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 436 IGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEA 486
++ A G K M G A +G + ++L G LD++
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 45/293 (15%)
Query: 286 MFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLG 345
M +L NL+T++ I C+ Q AL + +M M P+ VTL S+L
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM-MKLGYGPSIVTLNSLL------- 152
Query: 346 ALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALIN 405
GF ++ +V AL+D + G + +T ++ L++
Sbjct: 153 --------NGFCHGNRISEAV----ALVDQMVEMGY------------QPDTVTFTTLVH 188
Query: 406 GFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAP 465
G + +A EA+ + E M+ +G +P+ +T V++ G D ME I
Sbjct: 189 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 248
Query: 466 QIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF----LFAC-GHFKDVSRAER 520
+ Y ++D L + +D+A +L M + GI F L +C ++ S A R
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKM--ETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 521 VLRETVKMEKECAGDYVLLRNL---YATEKRWTDVEDV-KHMMKMRGSYKEVA 569
+L + +EK D V L + E + + E + M+K + + +V
Sbjct: 307 LLSDM--LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 167/370 (45%), Gaps = 21/370 (5%)
Query: 137 HTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDE 196
+T+ L+ C L + G +K G+ D+ +L++ + + A + D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 197 MSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGC 248
M E V++T +I G SEA L D M +R D+ + +++G K G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 249 MDMAQDLFDKMR----DKNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNA 300
D+A +L +KM + NV+ +++++ C+ + A +F M K N+ T+++
Sbjct: 234 TDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 293
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I C + +A +L +M+ + PN VT +++ A G L + ++
Sbjct: 294 LISCLCNYGRWSDASRLLSDMI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR 352
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNGRAKEA 416
+D ++ ++LI+ + +G A+ + E M K+ ++N LINGF R +
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDL 476
+E+F M + G N +T ++ D + FK M G+ P I Y ++D
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 477 LGRAGCLDEA 486
L + G L +A
Sbjct: 473 LCKNGKLAKA 482
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 163/366 (44%), Gaps = 48/366 (13%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
+KP TFT L+ GL +H A + A AL+D V+ G
Sbjct: 179 YKPDTVTFTTLI----------HGLFLHNKASE---------AVALIDRMVQRGC----- 214
Query: 192 KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGYVKLG 247
+ V++ AV+ G + GD A L + M E +V ++ +ID K
Sbjct: 215 -------QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 248 CMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---NLFTWN 299
D A +LF +M +K NVI+++S++S C G +++RL+ D++ K NL T++
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 327
Query: 300 AMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARR 359
A+I K + +A KL+ EM+ S++PN T S++ L L + R
Sbjct: 328 ALIDAFVKKGKLVKAEKLYEEMI-KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 360 KKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKE 415
K +V LI+ + K + + LF EM ++ T ++ LI+GF
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 416 ALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVD 475
A VF+ M+ G PN +T +L G + + F+ ++ + P I Y M++
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 506
Query: 476 LLGRAG 481
+ +AG
Sbjct: 507 GMCKAG 512
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 175/385 (45%), Gaps = 23/385 (5%)
Query: 132 FKPGGHTFTALVKG-CTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSA 190
++P F L+ G C C + E LE+ V+ G L LV+ G + A
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVS-EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 191 RKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDG 242
+ D M E + V++ V+ + G + A +L M ER D ++++IDG
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 243 YVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---N 294
K G +D A +LF++M K ++I++ +++ G+C G + A+L+ D++ K N
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 295 LFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQ 354
+ T++ +I K + EA +L +EM M + PN +T S++ L+ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 355 GFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVN 410
K D + LI+ Y K I LF EM + T ++N L+ GF +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 411 GRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHY 470
G+ + A ++F+ M+ RP+ ++ +L G +++ F +E + I Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 471 GCMVDLLGRAGCLDEAENLIQTMPF 495
++ + A +D+A +L ++P
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPL 536
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 165/339 (48%), Gaps = 40/339 (11%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
M + FK T+ L+ G C A R +G ++ +K ++ + L+D +VK
Sbjct: 289 MEIKGFKADIITYNTLIGG--FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAF 236
G L A ++ EM +R + +++ ++I G+ + + EA ++ D+M + D+ F
Sbjct: 347 GKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTF 406
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPE 292
N++I+GY K +D +LF +M + N +++ ++V G+CQ+G +E A+ +F M
Sbjct: 407 NILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS 466
Query: 293 K----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
+ ++ ++ ++ G C N + +AL++F + + + +E + + ++ + + +D
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 349 LGGW-------IQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETA--- 398
W ++G KLD R +I + + +A +LF +M E+ A
Sbjct: 526 -DAWDLFCSLPLKGV----KLDA--RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 399 -SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMI 436
++N LI + A A E+ E M GF P +++ +
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGF-PADVSTV 616
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+ M P T+ +L+ G E +++ + + G D+ L++ Y K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 185 GVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAF 236
+ ++F EMS R + V++ ++ G+ + G + A+KLF M R D+ ++
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 237 NVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPE 292
+++DG G ++ A ++F K+ ++ + ++ G C V+ A +F +P
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 293 KNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
K + +N MI C+ +A LFR+M P+E+T
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA-PDELT 580
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 391 EMPEKET-ASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
EM K T + N L+NG +NG+ +A+ + + M+ GF+PNE+T VL+ G
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFL 506
+ ME I Y ++D L + G LD A NL M F A+ I ++ +
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 507 FACGHFKDVSR---AERVLRETVKME-KECAGDYVLLRNLYATEKRWTDVEDVKHMMKMR 562
G F + R ++LR+ +K + + +L + + E + + + + M R
Sbjct: 306 ---GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 563 GSYKEVACSVIEVDGRFREFVAGDYLHSNLEVIQLTLGQ 601
G +A + I + F + L ++++ L + +
Sbjct: 363 G----IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 160/372 (43%), Gaps = 52/372 (13%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T+ +V G T+ L + + D+ + +A++D K G A+ +F EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 198 SER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCM 249
E+ + ++ +I G+ G S+A++L M ER DV FN +I VK G +
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 250 DMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
A+ L D+M + + +++ SM+ G+C++ + A+ MFDLM ++ T+N +I +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
C+ K+ E ++L RE+ R+ L +
Sbjct: 443 CRAKRVDEGMQLLREI------------------------------------SRRGLVAN 466
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFE 421
LI + + + A+ LF+EM +T + N L+ GF N + +EALE+FE
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAG 481
++ + + ++ VDE F ++ G+ P ++ Y M+
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 482 CLDEAENLIQTM 493
+ +A L M
Sbjct: 587 AISDANVLFHKM 598
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 172/417 (41%), Gaps = 68/417 (16%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+T F+P TF L+ G C+ R E L + G V+ GF A AL D V+
Sbjct: 167 LTKLGFQPDVVTFNTLLHG--LCLEDRISEALALFGYMVETGF----LEAVALFDQMVEI 220
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMI 240
G+ +++ +I G G + EA L + M + DV + ++
Sbjct: 221 GLTPVV------------ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 241 DGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEK--- 293
+G K+G A +L KM + +V+ +++++ C++G A+ +F M EK
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 294 -NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL----- 347
N+FT+N MI G C + +A +L R+M+ + P+ +T +++ A G L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 348 ---------------DLGGWIQGFARRKKLDGS-----------VRVSTALIDMYAKCGE 381
I GF + + D + V +ID+Y +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 382 IGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
+ L E+ + T ++N LI+GF A ++F+ MI G P+ IT
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+L ++E F+ ++ I Y ++ + + +DEA +L ++P
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 37/292 (12%)
Query: 218 MSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTS 269
+ +A FD M P N +I +V++ D+A L+ KM + N+ S+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 270 MVSGYCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
++ +C + + F + + ++ T+N ++ G C + EAL LF M+ +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 326 SVEP----NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
+E +++ + + P V L I G L+G V + AL++
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTL-----INGLC----LEGRVLEAAALVNKM----- 252
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
+G+ + + ++ ++NG G K AL + M +P+ + ++
Sbjct: 253 VGKGLHI-------DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 442 CNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G + + F M GIAP + Y CM+D G +A+ L++ M
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 160/372 (43%), Gaps = 52/372 (13%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
T+ +V G T+ L + + D+ + +A++D K G A+ +F EM
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 198 SER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCM 249
E+ + ++ +I G+ G S+A++L M ER DV FN +I VK G +
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 250 DMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGH 305
A+ L D+M + + +++ SM+ G+C++ + A+ MFDLM ++ T+N +I +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 306 CKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGS 365
C+ K+ E ++L RE+ R+ L +
Sbjct: 443 CRAKRVDEGMQLLREI------------------------------------SRRGLVAN 466
Query: 366 VRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFE 421
LI + + + A+ LF+EM +T + N L+ GF N + +EALE+FE
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 422 MMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAG 481
++ + + ++ VDE F ++ G+ P ++ Y M+
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 482 CLDEAENLIQTM 493
+ +A L M
Sbjct: 587 AISDANVLFHKM 598
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 172/417 (41%), Gaps = 68/417 (16%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATR--EGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+T F+P TF L+ G C+ R E L + G V+ GF A AL D V+
Sbjct: 167 LTKLGFQPDVVTFNTLLHG--LCLEDRISEALALFGYMVETGF----LEAVALFDQMVEI 220
Query: 185 GVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMI 240
G+ +++ +I G G + EA L + M + DV + ++
Sbjct: 221 GLTPVV------------ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 241 DGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEK--- 293
+G K+G A +L KM + +V+ +++++ C++G A+ +F M EK
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 294 -NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL----- 347
N+FT+N MI G C + +A +L R+M+ + P+ +T +++ A G L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 348 ---------------DLGGWIQGFARRKKLDGS-----------VRVSTALIDMYAKCGE 381
I GF + + D + V +ID+Y +
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKR 447
Query: 382 IGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIG 437
+ L E+ + T ++N LI+GF A ++F+ MI G P+ IT
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 438 VLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
+L ++E F+ ++ I Y ++ + + +DEA +L ++P
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 120/292 (41%), Gaps = 37/292 (12%)
Query: 218 MSEARKLFDVM----PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTS 269
+ +A FD M P N +I +V++ D+A L+ KM + N+ S+
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 270 MVSGYCQNGDVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSA 325
++ +C + + F + + ++ T+N ++ G C + EAL LF M+ +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 326 SVEP----NEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
+E +++ + + P V L I G L+G V + AL++
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTL-----INGLC----LEGRVLEAAALVNKM----- 252
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
+G+ + + ++ ++NG G K AL + M +P+ + ++
Sbjct: 253 VGKGLHI-------DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 442 CNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G + + F M GIAP + Y CM+D G +A+ L++ M
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 155/348 (44%), Gaps = 56/348 (16%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLF 225
D+ + ++D K+ + A +F EM + + V+++++I G S+A +L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 226 DVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQN 277
M E+ ++ FN +ID +VK G A+ L+D M D ++ ++ S+V+G+C +
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 278 GDVESARLMFDLMPEKNLF----TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
++ A+ MF+ M K+ F T+N +I G CK+K+ + +LFREM
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM------------ 426
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
+ L G T LI G+ A+ +F++M
Sbjct: 427 ------------------------SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 394 E----KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+ +++ L++G NG+ ++ALEVF+ M + + + ++ G VD
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
+G F ++ G+ P + Y M+ L L EA L++ M D
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 167/382 (43%), Gaps = 56/382 (14%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
++P T ++L+ G + + + V+ G+ D T L+ A
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 192 KVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
+ D M +R + V++ V+ G + GD A L + M E DV FN +ID
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---NL 295
K +D A +LF +M K NV++++S++S C G ++++L+ D++ +K NL
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+NA+I K + EA KL+ +M+ S++P+ T S+ + G
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMI-KRSIDPDIFTYNSL---------------VNG 374
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNG 411
F +LD +A+ +FE M K+ ++N LI GF +
Sbjct: 375 FCMHDRLD--------------------KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
R ++ E+F M G + +T ++ H G D ++ FK M G+ P I Y
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
++D L G L++A + M
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYM 496
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 21/347 (6%)
Query: 171 LYVATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFD 226
LY L++ + + + A + +M E S V+ ++++ GY +S+A L D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 227 VMPE----RDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNG 278
M E D F +I G A L D+M + N++++ +V+G C+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 279 DVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
D + A + + M E ++ +N +I CK + +AL LF+EM + + PN VT
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTY 298
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE 394
S++ + G + KK++ ++ ALID + K G+ A L+++M +
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 395 K----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDE 450
+ + ++N+L+NGF ++ R +A ++FE M+ + P+ +T ++ V++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 451 GRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
G F+ M G+ Y ++ L G D A+ + + M D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ L+KG +G E+ G D T L+ G +A+KV
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 194 FDEMSERSR----VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
F +M ++++ ++ G G + +A ++FD M + D+ + MI+G K
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 246 LGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLM----PEKNLFT 297
G +D DLF + K NV+++ +M+SG C ++ A + M P N T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 298 WNAMIGGHCKNKQPHEALKLFREM 321
+N +I H ++ + +L REM
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREM 601
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 176/373 (47%), Gaps = 31/373 (8%)
Query: 173 VATALVDMYVKFGVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDVM 228
+A+A++ ++G + A+++F+ + +++A+I Y R G EA +F+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 229 PE----RDVAAFNVMIDGYVKLGCMDMAQ--DLFDKMRDKNV----ISWTSMVSGYCQNG 278
E ++ +N +ID K G M+ Q FD+M+ V I++ S+++ + G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 279 DVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
E+AR +FD M E+++F++N ++ CK Q A ++ +M + + PN V+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSY 412
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSV-RVS-TALIDMYAKCGEIGRARLLFEEM 392
+V+ A G D + F + L ++ RVS L+ +Y K G A + EM
Sbjct: 413 STVIDGFAKAGRFDEA--LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 393 P----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
+K+ ++NAL+ G+ G+ E +VF M RE PN +T ++ + GL
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSF 505
E F+ + G+ + Y ++D L + G + A +LI M N + +S
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 506 LFACGHFKDVSRA 518
+ A G + R+
Sbjct: 591 IDAFGRSATMDRS 603
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 149/344 (43%), Gaps = 67/344 (19%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVA------VKNGFCLDLYVATALVDMYVKFG 185
+P T+ A++ C + G+E VA +NG D +L+ + + G
Sbjct: 299 LRPNLVTYNAVIDACG-----KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 186 VLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFN 237
+ +AR +FDEM+ E+ S+ ++ + G M A ++ MP + +V +++
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 238 VMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNGDVESA----RLMFDL 289
+IDG+ K G D A +LF +MR + +S+ +++S Y + G E A R M +
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 290 MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDL 349
+K++ T+NA++GG+ K + E K+F EM V PN +T
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM-KREHVLPNLLTY--------------- 517
Query: 350 GGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALIN 405
+ LID Y+K G A +F E + ++ALI+
Sbjct: 518 --------------------STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 406 GFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
NG A+ + + M +EG PN +T ++ A +D
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 33/290 (11%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEA----RKLFD 226
+ ++D + K G A +F EM RVS+ ++ YT+ G EA R++
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 227 VMPERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVES 282
V ++DV +N ++ GY K G D + +F +M+ + N++++++++ GY + G +
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 283 ARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
A +F L ++A+I CKN A+ L EM + PN VT S++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYNSII 591
Query: 339 PAVADLGALDLGG-WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKET 397
A +D + G GS+ S++ + + E R LF ++ T
Sbjct: 592 DAFGRSATMDRSADYSNG--------GSLPFSSSALSALTET-EGNRVIQLFGQL----T 638
Query: 398 ASWNALINGFAVNGRAKEA--LEVFEMMIREGFRPNEITMIGVLSACNHC 445
N G + + LEVF M + +PN +T +L+AC+ C
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRC 688
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 187/419 (44%), Gaps = 51/419 (12%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGV---AVKNGFCLDLYVATALVDMY 181
R M + F P +T A++ + + + E + V +K C D+ L+++
Sbjct: 187 RLMGLYGFNPSVYTCNAILG---SVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 243
Query: 182 VKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DV 233
G + + +M + + V++ V+ Y + G A +L D M + DV
Sbjct: 244 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 234 AAFNVMI----------DGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGYCQNGDVESA 283
+N++I GY+ L +D+ +M N +++ ++++G+ G V A
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLL------RDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 284 R------LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
L F L P N T+NA+I GH EALK+F M+ + + P+EV+ +
Sbjct: 358 SQLLNEMLSFGLSP--NHVTFNALIDGHISEGNFKEALKMFY-MMEAKGLTPSEVSYGVL 414
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSV--RVS-TALIDMYAKCGEIGRARLLFEEMP- 393
L + DL +GF R K +G R++ T +ID K G + A +L EM
Sbjct: 415 LDGLCKNAEFDLA---RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 394 ---EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDE 450
+ + +++ALINGF GR K A E+ + R G PN I ++ C G + E
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 451 GRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFAC 509
R ++AM G + +V L +AG + EAE ++ M D GI+ ++ F C
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD--GILPNTVSFDC 588
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 168/406 (41%), Gaps = 61/406 (15%)
Query: 114 LFRDLCRGTAT-------RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNG 166
L DLCR R M P T+ L+ G + EG
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING-----FSNEG----------- 352
Query: 167 FCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFD 226
+ +A+ L++ + FG+ + V++ A+I G+ G+ EA K+F
Sbjct: 353 ---KVLIASQLLNEMLSFGL------------SPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 227 VMPERDVA----AFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGYCQNG 278
+M + + ++ V++DG K D+A+ + +M+ V I++T M+ G C+NG
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 279 DVESARLMFDLMP----EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTL 334
++ A ++ + M + ++ T++A+I G CK + A ++ + + PN +
Sbjct: 458 FLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR-IYRVGLSPNGIIY 516
Query: 335 LSVLPAVADLGALDLGGWIQGFARRKKLDGSVR---VSTALIDMYAKCGEIGRA----RL 387
+++ +G L I L+G R L+ K G++ A R
Sbjct: 517 STLIYNCCRMGCLKEAIRIY---EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 573
Query: 388 LFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGL 447
+ + T S++ LING+ +G +A VF+ M + G P T +L G
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 448 VDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ E + K++ A Y ++ + ++G L +A +L M
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 171/404 (42%), Gaps = 54/404 (13%)
Query: 127 MTMTPFKPGGHTFTALVKGCTACMATREGLE----VHGVAVKNGFCLDLYVATALVDMYV 182
MT P T+ +L+KG RE + +H V +D + L+
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA----AVDTVMYNTLLTAMC 664
Query: 183 KFGVLGSARKVFDEMSERS----RVSWTAVIVGYTRCGDM-------SEARKLFDVMPER 231
K G L A +F EM +RS ++T++I G R G EA +V+P +
Sbjct: 665 KSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Query: 232 DVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMF 287
+ +DG K G ++M + ++++ +M+ GY + G +E
Sbjct: 725 --VMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN--- 779
Query: 288 DLMPE-------KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
DL+PE NL T+N ++ G+ K K + L+R ++++ + P+++T S++
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG-ILPDKLTCHSLVLG 838
Query: 341 VADLGALDLG-GWIQGFARRKKLDGSVRVSTALIDMY-AKC---GEIGRARLLFEEMP-- 393
+ + L++G ++ F R V V +M +KC GEI A L + M
Sbjct: 839 ICESNMLEIGLKILKAFICR-----GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893
Query: 394 ----EKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+K+T +A+++ N R +E+ V M ++G P IG+++ G +
Sbjct: 894 GISLDKDTC--DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
+ M I P MV L + G DEA L++ M
Sbjct: 952 TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 995
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 172/434 (39%), Gaps = 61/434 (14%)
Query: 117 DLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
DL RG R M G T+T ++ G E + + K+G D+ +A
Sbjct: 425 DLARGFYMR-MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 177 LVDMYVKFGVLGSAR----KVFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVM---- 228
L++ + K G +A+ +++ + + ++ +I R G + EA ++++ M
Sbjct: 484 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 229 PERDVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESAR 284
RD FNV++ K G + A++ M N +S+ +++GY +G+ A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 285 LMFDLMPE----KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPA 340
+FD M + FT+ +++ G CK EA K + L +PA
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS--------------LHAVPA 649
Query: 341 VADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----E 396
D +V +T L M K G + +A LF EM ++ +
Sbjct: 650 AVD---------------------TVMYNTLLTAM-CKSGNLAKAVSLFGEMVQRSILPD 687
Query: 397 TASWNALINGFAVNGRAKEA-LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCF 455
+ ++ +LI+G G+ A L E R PN++ + G G
Sbjct: 688 SYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFR 747
Query: 456 KAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSF---LFACGHF 512
+ M+ G P I M+D R G +++ +L+ M G L+++ L
Sbjct: 748 EQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKR 807
Query: 513 KDVSRAERVLRETV 526
KDVS + + R +
Sbjct: 808 KDVSTSFLLYRSII 821
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 129/319 (40%), Gaps = 30/319 (9%)
Query: 190 ARKVFDE---MSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERDVAAFNVMIDGYVKL 246
AR + E MS +S + A++ Y C + + ++++I Y++
Sbjct: 131 ARHILKELSLMSGKSSFVFGALMTTYRLCNS--------------NPSVYDILIRVYLRE 176
Query: 247 GCMDMAQDLFDKMR----DKNVISWTSMVSGYCQNG-DVESARLMFDLMPEK---NLFTW 298
G + + ++F M + +V + +++ ++G DV + +++ K ++ T+
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 299 NAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFAR 358
N +I C ++ L ++M S P VT +VL G + +
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSG-YAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAK 414
K +D V LI + I + LL +M ++ ++N LINGF+ G+
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMV 474
A ++ M+ G PN +T ++ G E + F ME G+ P YG ++
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 475 DLLGRAGCLDEAENLIQTM 493
D L + D A M
Sbjct: 416 DGLCKNAEFDLARGFYMRM 434
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 176/406 (43%), Gaps = 26/406 (6%)
Query: 109 SEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFC 168
++ F L D C+ + + +T ++ C T V G +K G+
Sbjct: 101 TKQFNLVLDFCK-----QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 169 LDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKL 224
D L+ G + A + D M E V++ +++ G R GD S A L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 225 FDVMPERDVAA----FNVMIDGYVKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQ 276
M ER+V A ++ +ID + GC+D A LF +M K +V+++ S+V G C+
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 277 NGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
G L+ M + N+ T+N ++ K + EA +L++EM+ + + PN +
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI-TRGISPNII 334
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM 392
T +++ L + R K + T+LI Y + +F +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 393 PEK----ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLV 448
++ +++ L+ GF +G+ K A E+F+ M+ G P+ +T +L G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 449 DEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP 494
++ F+ ++ + I Y +++ + + G +++A NL ++P
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 178/410 (43%), Gaps = 34/410 (8%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P T+ ++V G T L++ + D++ + ++D + G + +A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 193 VFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYV 244
+F EM + S V++ +++ G + G ++ L M R +V FNV++D +V
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 245 KLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLF 296
K G + A +L+ +M + N+I++ +++ GYC + A M DLM ++
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 297 TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGF 356
T+ ++I G+C K+ + +K+FR + V N VT ++ G + L +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 357 ARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNGR 412
+ V L+D G++ +A +FE++ + + + +I G G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 413 AKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGC 472
++A +F + +G +PN +T ++S G + E + ME G AP Y
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 473 MVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFKDVSRAERVL 522
++ R G L + LI+ M +CG D S + V+
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMK-------------SCGFSADASSIKMVI 585
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 154/348 (44%), Gaps = 56/348 (16%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLF 225
D+ + ++D K+ + A +F EM + + V+++++I G S+A +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 226 DVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVISWTSMVSGYCQN 277
M E+ ++ FN +ID +VK G A+ L D M D ++ ++ S+++G+C +
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 278 GDVESARLMFDLMPEKNLF----TWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVT 333
++ A+ MF+ M K+ F T+N +I G CK+K+ + +LFREM
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM------------ 351
Query: 334 LLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP 393
+ L G T LI G+ A+ +F++M
Sbjct: 352 ------------------------SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 394 E----KETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVD 449
+ +++ L++G NG+ ++ALEVF+ M + + + ++ G VD
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
+G F ++ G+ P + Y M+ L L EA L++ M D
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 167/382 (43%), Gaps = 56/382 (14%)
Query: 132 FKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSAR 191
++P T ++L+ G + + + V+ G+ D T L+ A
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 192 KVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAFNVMIDGY 243
+ D M +R + V++ V+ G + GD+ A L + M E DV FN +ID
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 244 VKLGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGD-VESARLMFDLMPEK---NL 295
K +D A +LF +M K NV++++S++S C G ++++L+ D++ +K NL
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 296 FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQG 355
T+NA+I K + EA KL +M+ S++P+ T S+ I G
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSL---------------ING 299
Query: 356 FARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKE----TASWNALINGFAVNG 411
F +LD +A+ +FE M K+ ++N LI GF +
Sbjct: 300 FCMHDRLD--------------------KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
R ++ E+F M G + +T ++ H G D ++ FK M G+ P I Y
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 399
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
++D L G L++A + M
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYM 421
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 134 PGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKV 193
P T+ L+KG +G E+ G D T L+ G +A+KV
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 194 FDEMSERSR----VSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVK 245
F +M ++++ ++ G G + +A ++FD M + D+ + MI+G K
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 246 LGCMDMAQDLFDKMRDK----NVISWTSMVSGYCQNGDVESARLMFDLMPEKNLF----T 297
G +D DLF + K NV+++ +M+SG C ++ A + M E T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 298 WNAMIGGHCKNKQPHEALKLFREM 321
+N +I H ++ + +L REM
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREM 526
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 40/275 (14%)
Query: 294 NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI 353
NL+T+N +I C+ Q AL L +M M EP+ VTL S+L
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLL--------------- 87
Query: 354 QGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEKETASWNALINGFAVNGRA 413
G+ K++ +V AL+D + G +T ++ LI+G ++ +A
Sbjct: 88 NGYCHGKRISDAV----ALVDQMVEMGY------------RPDTITFTTLIHGLFLHNKA 131
Query: 414 KEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCM 473
EA+ + + M++ G +PN +T V++ G +D ME I + + +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 474 VDLLGRAGCLDEAENLIQTMP---FDANGIILSSFLFACGHFKDVSRAERVLRETVKMEK 530
+D L + +D+A NL + M N + SS + + S A ++L + + EK
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI--EK 249
Query: 531 ECAGDYVLLRNL---YATEKRWTDVEDVKHMMKMR 562
+ + V L + E ++ + E + M R
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 23/287 (8%)
Query: 170 DLYVATALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCG---DMSEAR 222
+++ +++ K G + AR V ++M + VS+ +I GY + G M +A
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 223 KLFDVMPERDVA----AFNVMIDGYVK----LGCMDMAQDLFDKMRDKNVISWTSMVSGY 274
+ M E DV+ FN++IDG+ K G M + +++ D+ NVIS+ S+++G
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 275 CQNGDVESARLMFDLM----PEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
C G + A M D M + NL T+NA+I G CKN EAL +F + +V P
Sbjct: 342 CNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PT 400
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
++ A LG +D G ++ R+ + V LI + G I A+ LF+
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 391 EMPEK---ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEIT 434
++ K + +++ L+ G+ G +++A + + M + G +P +T
Sbjct: 461 QLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT 507
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 53/391 (13%)
Query: 159 HGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTR 214
H +++ + C++ +A LV Y + F + S +S +++ +
Sbjct: 141 HAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLK 200
Query: 215 CGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMR----DKNVIS 266
++ ++ M R +V FNV+I+ K G M+ A+D+ + M+ NV+S
Sbjct: 201 ENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVS 260
Query: 267 WTSMVSGYCQ---NGDVESARLMFDLMPEK----NLFTWNAMIGGHCKNKQPHEALKLFR 319
+ +++ GYC+ NG + A + M E NL T+N +I G K+ ++K+F+
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 320 EMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKC 379
EML V+PN ++ S++ + + G + + + R K+ S V LI
Sbjct: 321 EML-DQDVKPNVISYNSLINGLCNGGKIS-----EAISMRDKM-VSAGVQPNLI------ 367
Query: 380 GEIGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVL 439
++NALINGF N KEAL++F + +G P ++
Sbjct: 368 -------------------TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 440 SACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANG 499
A G +D+G + ME GI P + Y C++ L R G ++ A+ L +
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP 468
Query: 500 IILSSFLFACGHFK--DVSRAERVLRETVKM 528
+++ + G+ + + +A +L+E KM
Sbjct: 469 DLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 24/256 (9%)
Query: 113 TLFRDLCRG-------TATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKN 165
+L LC G + M +P T+ AL+ G +E L++ G
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 166 GFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV----SWTAVIVGYTRCGDMSEA 221
G + L+D Y K G + + +EM V ++ +I G R G++ A
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 222 RKLFDVMPER---DVAAFNVMIDGYVKLGCMDMAQDLFDKMRDKNV----ISWTSMVSGY 274
+KLFD + + D+ F+++++GY + G A L +M + +++ ++ GY
Sbjct: 456 KKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 275 CQNGDVESARLMFDLMPEK-----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEP 329
C+ G++++A M M ++ N+ ++N ++ G+ + + +A L EML V P
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV-P 574
Query: 330 NEVTLLSVLPAVADLG 345
N +T V + D G
Sbjct: 575 NRITYEIVKEEMVDQG 590
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TF L++G + LE+ GV G D+ L+ + K L A ++F ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 198 SERS-----RVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGC 248
S V++T++I GY + G M EA L D M + FNV++DGY K G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 249 MDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNA 300
M A+++ KM +V+++TS++ GYC+ G V +++ M + N FT++
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I C NE LL + L + D+ Q F
Sbjct: 388 LINALC-----------------------NENRLLKARELLGQLASKDI--IPQPFMYNP 422
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEA 416
+DG + K G++ A ++ EEM +K + ++ LI G + GR EA
Sbjct: 423 VIDG-----------FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEG 451
+ +F M+ G P++IT+ +LS G+ E
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 237 NVMIDGYVKLGCMDMAQDLFDK----MRDKNVISWTSMVSGYCQNGDVESARLMFDLMP- 291
N +++ VKL ++ A LFD+ + ++ ++ G C G E A + +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 292 ---EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
E ++ T+N +I G CK+ + ++A ++F+++ + P+ VT S++ G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALI 404
+ R + + L+D YAK GE+ A + +M + ++ +LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA-CNHCGLVDEGRRCFKAMEGFGI 463
+G+ G+ + ++E M G PN T +++A CN L+ + R + I
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL-KARELLGQLASKDI 413
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
PQ Y ++D +AG ++EA +++ M
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 97 SMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGL 156
SMI+ + + E +L D+ R P TF LV G
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLR---------LGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV--SWTAVIVGYTR 214
E+ G + G D+ T+L+D Y + G + ++++EM+ R ++T I+
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 215 CGD--MSEARKLFDVMPERDVAA----FNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT 268
C + + +AR+L + +D+ +N +IDG+ K G ++ A + ++M K
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK----- 447
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
C+ P+K FT +I GHC + EA+ +F +M+ +
Sbjct: 448 ------CK--------------PDKITFT--ILIIGHCMKGRMFEAVSIFHKMV-AIGCS 484
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
P+++T+ S+L + G + AR+ + + V + T
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 146/335 (43%), Gaps = 57/335 (17%)
Query: 138 TFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEM 197
TF L++G + LE+ GV G D+ L+ + K L A ++F ++
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 198 SERS-----RVSWTAVIVGYTRCGDMSEARKLFDVMPERDV----AAFNVMIDGYVKLGC 248
S V++T++I GY + G M EA L D M + FNV++DGY K G
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 249 MDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLMPEK----NLFTWNA 300
M A+++ KM +V+++TS++ GYC+ G V +++ M + N FT++
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRK 360
+I C NE LL + L + D+ Q F
Sbjct: 388 LINALC-----------------------NENRLLKARELLGQLASKDI--IPQPFMYNP 422
Query: 361 KLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGFAVNGRAKEA 416
+DG + K G++ A ++ EEM +K + ++ LI G + GR EA
Sbjct: 423 VIDG-----------FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471
Query: 417 LEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEG 451
+ +F M+ G P++IT+ +LS G+ E
Sbjct: 472 VSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 237 NVMIDGYVKLGCMDMAQDLFDK----MRDKNVISWTSMVSGYCQNGDVESARLMFDLMP- 291
N +++ VKL ++ A LFD+ + ++ ++ G C G E A + +M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 292 ---EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALD 348
E ++ T+N +I G CK+ + ++A ++F+++ + P+ VT S++ G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 349 LGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPE----KETASWNALI 404
+ R + + L+D YAK GE+ A + +M + ++ +LI
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 405 NGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA-CNHCGLVDEGRRCFKAMEGFGI 463
+G+ G+ + ++E M G PN T +++A CN L+ + R + I
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLL-KARELLGQLASKDI 413
Query: 464 APQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
PQ Y ++D +AG ++EA +++ M
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 97 SMITTHFAIRQFSEPFTLFRDLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGL 156
SMI+ + + E +L D+ R P TF LV G
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLR---------LGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 157 EVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSERSRV--SWTAVIVGYTR 214
E+ G + G D+ T+L+D Y + G + ++++EM+ R ++T I+
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 215 CGD--MSEARKLFDVMPERDVAA----FNVMIDGYVKLGCMDMAQDLFDKMRDKNVISWT 268
C + + +AR+L + +D+ +N +IDG+ K G ++ A + ++M K
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK----- 447
Query: 269 SMVSGYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVE 328
C+ P+K FT +I GHC + EA+ +F +M+ +
Sbjct: 448 ------CK--------------PDKITFT--ILIIGHCMKGRMFEAVSIFHKMV-AIGCS 484
Query: 329 PNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST 370
P+++T+ S+L + G + AR+ + + V + T
Sbjct: 485 PDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLET 526
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 210/500 (42%), Gaps = 51/500 (10%)
Query: 58 TTCASIAVSTSRRNEAVSIVRHARRFFDATHKRDEFLCN-SMITTHFAIRQFSEPFTLFR 116
T+ S ++ R EAV++ + K +E C ++IT + + F + T +
Sbjct: 212 TSLISAFANSGRYREAVNVFK----------KMEEDGCKPTLITYNVILNVFGKMGTPWN 261
Query: 117 DLCRGTATRTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATA 176
+ + M P +T+ L+ C +E +V GF D A
Sbjct: 262 KIT--SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 177 LVDMYVKFGVLGSARKVFDEMS----ERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER- 231
L+D+Y K A KV +EM S V++ ++I Y R G + EA +L + M E+
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 232 ---DVAAFNVMIDGYVKLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESAR 284
DV + ++ G+ + G ++ A +F++MR+ N+ ++ + + Y G
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 285 LMFD------LMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVL 338
+FD L P+ + TWN ++ +N E +F+EM + V P T +++
Sbjct: 440 KIFDEINVCGLSPD--IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLI 496
Query: 339 PAVADLGALDLGGWIQGFARRKKLDGSV----RVSTALIDMYAKCGEIGRARLLFEEMPE 394
A + G+ + + R+ LD V ++ A+ G ++ + EM +
Sbjct: 497 SAYSRCGSFEQAMTVY----RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 395 ----KETASWNALINGFAVNGRAKEALEVFEMMIREG-FRPNEITMIGVLSACNHCGLVD 449
++ +L++ +A NG+ + + G P + + ++ C+ C L+
Sbjct: 553 GRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 450 EGRRCFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMP---FDANGIILSSFL 506
E R F ++ G +P I MV + GR + +A ++ M F + +S +
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 507 FACGHFKDVSRAERVLRETV 526
+ D ++E +LRE +
Sbjct: 672 YMHSRSADFGKSEEILREIL 691
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 166/382 (43%), Gaps = 59/382 (15%)
Query: 169 LDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVIVGYTRCGDMSEARKL 224
LD V ++ M K G + SA +F+ + E S+T++I + G EA +
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 225 FDVMPE----RDVAAFNVMIDGYVKLGCM-DMAQDLFDKMRDKNV----ISWTSMVSGYC 275
F M E + +NV+++ + K+G + L +KM+ + ++ ++++ C
Sbjct: 231 FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-C 289
Query: 276 QNGDV-ESARLMFDLMPEKNL----FTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPN 330
+ G + + A +F+ M T+NA++ + K+ +P EA+K+ EM+++ P+
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPS 348
Query: 331 EVTLLSVLPAVADLGALD--------------------LGGWIQGFARRKKLDGSVRVS- 369
VT S++ A A G LD + GF R K++ ++ +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 370 --------------TALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNG 411
A I MY G+ +F+E+ + +WN L+ F NG
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNG 468
Query: 412 RAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYG 471
E VF+ M R GF P T ++SA + CG ++ ++ M G+ P + Y
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 472 CMVDLLGRAGCLDEAENLIQTM 493
++ L R G +++E ++ M
Sbjct: 529 TVLAALARGGMWEQSEKVLAEM 550
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 153/386 (39%), Gaps = 31/386 (8%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
KP TF A +K E +++ G D+ L+ ++ + G+
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 193 VFDEMSE----RSRVSWTAVIVGYTRCGDMSEA----RKLFDVMPERDVAAFNVMIDGYV 244
VF EM R ++ +I Y+RCG +A R++ D D++ +N ++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 245 KLGCMDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDVESARLMFDLM---------P 291
+ G + ++ + +M D N +++ S++ Y ++ LM L P
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG---LMHSLAEEVYSGVIEP 592
Query: 292 EKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGG 351
L ++ C + P EA + F E L P+ TL S++ +
Sbjct: 593 RAVLLKTLVLVCSKC-DLLP-EAERAFSE-LKERGFSPDITTLNSMVSIYGRRQMVAKAN 649
Query: 352 WIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK----ETASWNALINGF 407
+ + + + S+ +L+ M+++ + G++ + E+ K + S+N +I +
Sbjct: 650 GVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY 709
Query: 408 AVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQI 467
N R ++A +F M G P+ IT + + + +E + M G P
Sbjct: 710 CRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Query: 468 EHYGCMVDLLGRAGCLDEAENLIQTM 493
Y +VD + DEA+ ++ +
Sbjct: 770 NTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 173/379 (45%), Gaps = 31/379 (8%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSE----RSRVSWTAVIVGYTRCGDMSEARKLFDVMP- 229
+++ Y K G + A+ F + + S S +I G G ++EA +L M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 230 ---ERDVAAFNVMIDGYVKLGCM----DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVES 282
E D +N++ G+ LG + ++ +D+ DK +VI++T ++ G CQ G+++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 283 ARLMFDLMPEK-----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
++ M + ++ + M+ G CK + EAL LF +M + + P+ V V
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIV 404
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-- 395
+ + LG D+ W+ K++ + R AL+ + G + AR L + +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 396 --ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ +N +I+G+A +G +EALE+F+++I G P+ T ++ + E R+
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 454 CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFK 513
++ +G+AP + Y ++D G + L + M A GI ++ ++ FK
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK--AEGIPPTNVTYSVI-FK 581
Query: 514 DVSRA------ERVLRETV 526
+ R VLRE +
Sbjct: 582 GLCRGWKHENCNHVLRERI 600
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 173/394 (43%), Gaps = 26/394 (6%)
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD----VAAFNVMIDGYVKLGC 248
V+ E+ +++ +++ V+ G R + +A +D V +FN ++ GY KLG
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 249 MDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDV-ESARLMFDLMP---EKNLFTWNA 300
+DMA+ F + +V S +++G C G + E+ L D+ E + T+N
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI--QGFAR 358
+ G A ++ R+ML + P+ +T +L LG +D+G + +R
Sbjct: 298 LAKGFHLLGMISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAK 414
+L+ + S L + K G I A LF +M + +++ +I+G G+
Sbjct: 357 GFELNSIIPCSVMLSGL-CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMV 474
AL +++ M + PN T +L G++ E R ++ G I Y ++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 475 DLLGRAGCLDEAENLIQTM---PFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKE 531
D ++GC++EA L + + + +S ++ ++++ A ++L + +K+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGL 534
Query: 532 CAG--DYVLLRNLYATEKRWTDVEDVKHMMKMRG 563
Y L + YA +++++ MK G
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 68/342 (19%)
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVI 209
E L + +G DL + ++ K G A ++DEM ++ + + A++
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 210 VGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRD---- 261
+G + G + EAR L D + D+ +N++IDGY K GC++ A +LF + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDL-------------------------------- 289
+V ++ S++ GYC+ ++ AR + D+
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 290 --------MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM-----------SASVEPN 330
+P N+ T++ + G C+ + + RE + S + P+
Sbjct: 561 RREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
++T +++ + + L + + LD S LID G I +A
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 391 EMPEKETA----SWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ E+ + ++ LI V G + A+++F ++ GF
Sbjct: 680 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 1/177 (0%)
Query: 322 LMSASVEPNEVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGE 381
L+ P+ + + + A+L +L+ + + K G +++ +I M+ +C
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 382 IGRARLLFEEMPEKETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSA 441
I A+ +F+ M +K+ SW+ ++ ++ NG +AL +FE M + G +PNE T + V A
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 346
Query: 442 CNHCGLVDEGRRCFKAMEG-FGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDA 497
C G ++E F +M+ GI+P+ EHY ++ +LG+ G L EAE I+ +PF+
Sbjct: 347 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEP 403
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 220 EARKLFD--VMPERDVAAFNVMIDGYVKLGCMDMAQDLFD-----KMRDKNVISWTSMVS 272
+A +L D MP+R+ F ++ + L ++ ++ + D K R ++ ++S
Sbjct: 223 DAIELLDKGAMPDRE--CFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN-NMVIS 279
Query: 273 GYCQNGDVESARLMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEV 332
+ + + A+ +FD M +K++ +W+ M+ + N +AL LF EM ++PNE
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-LKPNEE 338
Query: 333 TLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVST------ALIDMYAKCGEIGRAR 386
T L+V A A +G ++ + F + +S ++ + KCG + A
Sbjct: 339 TFLTVFLACATVGGIE-----EAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 387 LLFEEMPEKETAS-WNALINGFAVNG 411
++P + TA W A+ N ++G
Sbjct: 394 QYIRDLPFEPTADFWEAMRNYARLHG 419
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 173/379 (45%), Gaps = 31/379 (8%)
Query: 175 TALVDMYVKFGVLGSARKVFDEMSE----RSRVSWTAVIVGYTRCGDMSEARKLFDVMP- 229
+++ Y K G + A+ F + + S S +I G G ++EA +L M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 230 ---ERDVAAFNVMIDGYVKLGCM----DMAQDLFDKMRDKNVISWTSMVSGYCQNGDVES 282
E D +N++ G+ LG + ++ +D+ DK +VI++T ++ G CQ G+++
Sbjct: 286 HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDM 345
Query: 283 ARLMFDLMPEK-----NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSV 337
++ M + ++ + M+ G CK + EAL LF +M + + P+ V V
Sbjct: 346 GLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM-KADGLSPDLVAYSIV 404
Query: 338 LPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMPEK-- 395
+ + LG D+ W+ K++ + R AL+ + G + AR L + +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 464
Query: 396 --ETASWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRR 453
+ +N +I+G+A +G +EALE+F+++I G P+ T ++ + E R+
Sbjct: 465 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 524
Query: 454 CFKAMEGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTMPFDANGIILSSFLFACGHFK 513
++ +G+AP + Y ++D G + L + M A GI ++ ++ FK
Sbjct: 525 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK--AEGIPPTNVTYSV-IFK 581
Query: 514 DVSRA------ERVLRETV 526
+ R VLRE +
Sbjct: 582 GLCRGWKHENCNHVLRERI 600
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 173/394 (43%), Gaps = 26/394 (6%)
Query: 193 VFDEMSERSRVSWTAVIVGYTRCGDMSEARKLFDVMPERD----VAAFNVMIDGYVKLGC 248
V+ E+ +++ +++ V+ G R + +A +D V +FN ++ GY KLG
Sbjct: 178 VYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 249 MDMAQDLFDKMRD----KNVISWTSMVSGYCQNGDV-ESARLMFDLMP---EKNLFTWNA 300
+DMA+ F + +V S +++G C G + E+ L D+ E + T+N
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 301 MIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGALDLGGWI--QGFAR 358
+ G A ++ R+ML + P+ +T +L LG +D+G + +R
Sbjct: 298 LAKGFHLLGMISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 359 RKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETASWNALINGFAVNGRAK 414
+L+ + S L + K G I A LF +M + +++ +I+G G+
Sbjct: 357 GFELNSIIPCSVMLSGL-CKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 415 EALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGFGIAPQIEHYGCMV 474
AL +++ M + PN T +L G++ E R ++ G I Y ++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 475 DLLGRAGCLDEAENLIQTM---PFDANGIILSSFLFACGHFKDVSRAERVLRETVKMEKE 531
D ++GC++EA L + + + +S ++ ++++ A ++L + +K+
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL-DVIKLYGL 534
Query: 532 CAG--DYVLLRNLYATEKRWTDVEDVKHMMKMRG 563
Y L + YA +++++ MK G
Sbjct: 535 APSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/342 (19%), Positives = 136/342 (39%), Gaps = 68/342 (19%)
Query: 154 EGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARKVFDEMSER----SRVSWTAVI 209
E L + +G DL + ++ K G A ++DEM ++ + + A++
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 210 VGYTRCGDMSEARKLFDVMPER----DVAAFNVMIDGYVKLGCMDMAQDLFDKMRD---- 261
+G + G + EAR L D + D+ +N++IDGY K GC++ A +LF + +
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 262 KNVISWTSMVSGYCQNGDVESARLMFDL-------------------------------- 289
+V ++ S++ GYC+ ++ AR + D+
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 290 --------MPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLM-----------SASVEPN 330
+P N+ T++ + G C+ + + RE + S + P+
Sbjct: 561 RREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 331 EVTLLSVLPAVADLGALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFE 390
++T +++ + + L + + LD S LID G I +A
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 391 EMPEKETA----SWNALINGFAVNGRAKEALEVFEMMIREGF 428
+ E+ + ++ LI V G + A+++F ++ GF
Sbjct: 680 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 175/395 (44%), Gaps = 27/395 (6%)
Query: 125 RTMTMTPFKPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKF 184
+ M +P ++ L+ G G ++ A+ G LD+ V ++ +D+YVK
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369
Query: 185 GVLGSARKVFDEM----SERSRVSWTAVIVGYTRCGDMSEARKLFDVMPER----DVAAF 236
G L +A V+ M + V++T +I G + G + EA ++ + +R + +
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 237 NVMIDGYVKLGCMDMAQDLFDKM----RDKNVISWTSMVSGYCQNG-DVESARLMFDLMP 291
+ +IDG+ K G + L++ M +V+ + +V G + G + + R ++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 292 EK---NLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL- 347
+ N+ +N++I G C+ + EALK+FR M + ++P+ T +V+ A
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEDAFC 548
Query: 348 -----DLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEMP----EKETA 398
+G + +R K+ + V +I + KC I A F + E +
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 399 SWNALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAM 458
++N +I G+ R EA +FE++ F PN +T+ ++ +D R F M
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 459 EGFGIAPQIEHYGCMVDLLGRAGCLDEAENLIQTM 493
G P YGC++D ++ ++ + L + M
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 165/379 (43%), Gaps = 45/379 (11%)
Query: 133 KPGGHTFTALVKGCTACMATREGLEVHGVAVKNGFCLDLYVATALVDMYVKFGVLGSARK 192
+P T+++L+ G C R G ++ +K G+ D+ + LVD K G++ A +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 193 VFDEMSERS----RVSWTAVIVGYTRCGDMSEARKLFDVMP----ERDVAAF------NV 238
+M +S V + ++I G+ R EA K+F +M + DVA F ++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 239 MIDGYVKLGCMDMAQDLFDKMRDKNVISWTSMVSGY-------CQNGDVESARLMFDLMP 291
M D + K + LFD M+ +N IS V C +E A F+ +
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLFKCHR--IEDASKFFNNLI 599
Query: 292 E----KNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADLGAL 347
E ++ T+N MI G+C ++ EA ++F E+L PN VTL ++ +
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNN-- 656
Query: 348 DLGGWIQGFARRKKLDGSVRVST--ALIDMYAKCGEIGRARLLFEEMPEK----ETASWN 401
D+ G I+ F+ + T L+D ++K +I + LFEEM EK S++
Sbjct: 657 DMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYS 716
Query: 402 ALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEGF 461
+I+G GR EA +F I P+ + ++ G + E ++ M
Sbjct: 717 IIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Query: 462 GIAPQIEHYGCMVDLLGRA 480
G+ P DLL RA
Sbjct: 777 GVKPD--------DLLQRA 787
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 5/206 (2%)
Query: 285 LMFDLMPEKNLFTWNAMIGGHCKNKQPHEALKLFREMLMSASVEPNEVTLLSVLPAVADL 344
L+ D P N+ T+ +I G CK + A LF+ M +EP+ + +++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVM-EQRGIEPDLIAYSTLIDGYFKA 334
Query: 345 GALDLGGWIQGFARRKKLDGSVRVSTALIDMYAKCGEIGRARLLFEEM----PEKETASW 400
G L +G + A K + V V ++ ID+Y K G++ A ++++ M ++
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 401 NALINGFAVNGRAKEALEVFEMMIREGFRPNEITMIGVLSACNHCGLVDEGRRCFKAMEG 460
LI G +GR EA ++ +++ G P+ +T ++ CG + G ++ M
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 461 FGIAPQIEHYGCMVDLLGRAGCLDEA 486
G P + YG +VD L + G + A
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHA 480