Miyakogusa Predicted Gene

Lj1g3v2926310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2926310.1 tr|B9GRZ9|B9GRZ9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_756443 PE=4
SV=1,61.64,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
DUF620,Protein of unknown function DUF620,gene.g33766.t1.1
         (123 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05840.1 | Symbols:  | Protein of unknown function (DUF620) |...   154   2e-38
AT3G55720.1 | Symbols:  | Protein of unknown function (DUF620) |...   120   2e-28
AT3G19540.1 | Symbols:  | Protein of unknown function (DUF620) |...   103   3e-23
AT1G49840.1 | Symbols:  | Protein of unknown function (DUF620) |...   102   7e-23
AT5G66740.1 | Symbols:  | Protein of unknown function (DUF620) |...    88   1e-18
AT1G27690.1 | Symbols:  | Protein of unknown function (DUF620) |...    87   2e-18
AT1G79420.1 | Symbols:  | Protein of unknown function (DUF620) |...    86   7e-18
AT1G75160.1 | Symbols:  | Protein of unknown function (DUF620) |...    80   4e-16
AT5G06610.1 | Symbols:  | Protein of unknown function (DUF620) |...    76   6e-15

>AT5G05840.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr5:1757268-1760458 REVERSE LENGTH=439
          Length = 439

 Score =  154 bits (388), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 90/109 (82%), Gaps = 1/109 (0%)

Query: 1   MESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSID 60
           MESLIQDYRTVDGI VAH+GK+ VSLFRFGE  + HSRTRMEE WEIEE+DFN+KGLS+D
Sbjct: 319 MESLIQDYRTVDGILVAHAGKSSVSLFRFGENSDNHSRTRMEETWEIEEMDFNIKGLSMD 378

Query: 61  CFLPPSDLKREQEKEGCDNGVVVETNNAKLPYKIRSASFRISASKVAAV 109
           CFLPPSDLK++ ++E  +    +  NN KLP KIRSAS RIS+SKV A+
Sbjct: 379 CFLPPSDLKKDDDEEE-EIECGLAANNEKLPMKIRSASLRISSSKVLAI 426


>AT3G55720.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr3:20679893-20681338 FORWARD LENGTH=438
          Length = 438

 Score =  120 bits (301), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/109 (56%), Positives = 79/109 (72%), Gaps = 3/109 (2%)

Query: 2   ESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSIDC 61
           E+LIQDY+++DGIQ+AH GKTRVSL R  E  E+HS+T MEE WEIEEV FNVKGLS D 
Sbjct: 324 ETLIQDYKSIDGIQIAHRGKTRVSLLRLDESLESHSKTTMEESWEIEEVGFNVKGLSSDF 383

Query: 62  FLPPSDL-KREQEKEGCDNGVVVETNNAKLPYKIRSASFRISASKVAAV 109
           FLPP DL  +E+E+ G   G    T+   LP K+ + S++I +SKV A+
Sbjct: 384 FLPPGDLCIKEEEETGFSFGDY--TSPMLLPLKVSTTSWKIKSSKVTAI 430


>AT3G19540.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr3:6780762-6782633 FORWARD LENGTH=485
          Length = 485

 Score =  103 bits (256), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 57/76 (75%)

Query: 3   SLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSIDCF 62
           S + DYR V+GI +AHSG + V+LFRFGE   +H+RT+MEE W IEEV FNV GLS+DCF
Sbjct: 369 SSLDDYRQVEGIMIAHSGHSVVTLFRFGEVATSHTRTKMEESWTIEEVAFNVPGLSLDCF 428

Query: 63  LPPSDLKREQEKEGCD 78
           +PP+DLK     E C+
Sbjct: 429 IPPADLKTGSLTESCE 444


>AT1G49840.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr1:18452243-18454157 FORWARD LENGTH=494
          Length = 494

 Score =  102 bits (253), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 51/109 (46%), Positives = 70/109 (64%), Gaps = 4/109 (3%)

Query: 1   MESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSID 60
           + S + DY+ V+GI +AHSG++ V+LFRFGE   +H+RT+MEE W IEEV FNV GLS+D
Sbjct: 375 INSSLDDYKQVEGIMIAHSGRSVVTLFRFGEVAMSHTRTKMEERWTIEEVAFNVPGLSLD 434

Query: 61  CFLPPSDLKREQEKEGCDNGVVVETNNAKLPYKIRSASFRISASKVAAV 109
           CF+PP+DL+     E C+     E   + L      AS     +KVAA+
Sbjct: 435 CFIPPADLRSGSLTEACEYSGQEEKGKSSLAL----ASTTAHRAKVAAL 479


>AT5G66740.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr5:26647114-26648558 FORWARD LENGTH=370
          Length = 370

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 2   ESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSIDC 61
           ES++ DYR VD + +AH GKT V++FR+GE    H R +M E W IEEVDFNV GLS+D 
Sbjct: 301 ESVMDDYRYVDNVNIAHGGKTSVTVFRYGEASANHRR-QMTEKWRIEEVDFNVWGLSVDH 359

Query: 62  FLPPSDLKREQ 72
           FLPP++L+ E+
Sbjct: 360 FLPPANLQIEK 370


>AT1G27690.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr1:9636681-9638307 FORWARD LENGTH=433
          Length = 433

 Score = 87.4 bits (215), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 1   MESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETH-SRTRMEEVWEIEEVDFNVKGLSI 59
           + S ++DY+ V+GI +AHSG++  +L RFG+    H ++T M+E W I+E+ FNV GLSI
Sbjct: 341 INSYLEDYKPVEGIMIAHSGRSVATLLRFGDMSSGHNTKTTMQEAWVIDEISFNVPGLSI 400

Query: 60  DCFLPPSDLKREQEKEGCDNGVVVET 85
           DCF+PPS+L+ +   E    G  + T
Sbjct: 401 DCFIPPSELRFDSHVEDLSQGPKIRT 426


>AT1G79420.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr1:29871537-29874166 FORWARD LENGTH=417
          Length = 417

 Score = 85.5 bits (210), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 49/64 (76%)

Query: 5   IQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSIDCFLP 64
           I DYR VDG+ VAH G+   ++FRFGE    +SRTRMEE+W I++V F+V GLS+D F+P
Sbjct: 336 IGDYRDVDGVAVAHCGRAVATVFRFGETSLQYSRTRMEEIWRIDDVVFDVPGLSLDSFIP 395

Query: 65  PSDL 68
           P+D+
Sbjct: 396 PADI 399


>AT1G75160.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr1:28209534-28211624 FORWARD LENGTH=395
          Length = 395

 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 2/72 (2%)

Query: 1   MESLIQDYRTVDGIQVAHSGKTRVSLFRFGEGPETHSRTRMEEVWEIEEVDFNVKGLSID 60
           MES+I DY  VD + +AH G+T  +L+R+G G   H R R+EE W IEEVDFN+ GL ++
Sbjct: 326 MESIIDDYIFVDAVNIAHGGQTVTTLYRYG-GAVNHRR-RIEEKWRIEEVDFNICGLCLE 383

Query: 61  CFLPPSDLKREQ 72
            FLPPSD+  + 
Sbjct: 384 SFLPPSDINNDH 395


>AT5G06610.1 | Symbols:  | Protein of unknown function (DUF620) |
           chr5:2029953-2033620 FORWARD LENGTH=368
          Length = 368

 Score = 75.9 bits (185), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 3/74 (4%)

Query: 1   MESLIQDYRTVDG--IQVAHSGKTRVSLFRFGEGPETH-SRTRMEEVWEIEEVDFNVKGL 57
           M S ++DYR ++G  + +AHSGKT V + RFGE  +   S TRMEE W I++V F+V GL
Sbjct: 280 MSSWMEDYRAIEGSEVVIAHSGKTDVLISRFGETLKGGISVTRMEEKWTIDDVAFDVPGL 339

Query: 58  SIDCFLPPSDLKRE 71
           S+DCF+PP ++K +
Sbjct: 340 SVDCFIPPKEMKMD 353