Miyakogusa Predicted Gene

Lj1g3v2894990.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2894990.2 Non Chatacterized Hit- tr|B7FNA7|B7FNA7_MEDTR
Putative uncharacterized protein (Fragment)
OS=Medicag,33.33,3e-18,seg,NULL; CHITINASE,NULL,CUFF.29638.2
         (334 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25480.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...   238   5e-63
AT4G01050.1 | Symbols: TROL | thylakoid rhodanese-like | chr4:45...    95   6e-20

>AT3G25480.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr3:9235591-9236598 REVERSE
           LENGTH=264
          Length = 264

 Score =  238 bits (606), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 133/263 (50%), Positives = 167/263 (63%), Gaps = 18/263 (6%)

Query: 1   MDSLSILLSSYPLCNQNHFKTHKPFSPLSNHTPHHSATQPLASSSSTKKNLFKNPILSLS 60
           M SL I+L+S PL N       KP S      P  ++T+       TK NL      S++
Sbjct: 1   MTSLPIILASSPLRNLT-----KPCSTSQIPKPIQNSTKQPPIHLLTKTNL------SVT 49

Query: 61  LINLFTPFPSLAVEPSAPTLVDSEAGKISLETVLVTIDDFFNRYPFFVAGCTFIWLIAIP 120
           +  L    P LA E       D  +GKI LE++LVTID+FFN+YPFFVAGCTF +L+  P
Sbjct: 50  ISQLIITSPVLASESFDSISSDPSSGKIDLESILVTIDNFFNKYPFFVAGCTFTYLVVYP 109

Query: 121 LAEEYFKKCKFVSAIDAFRKLRDDPDSQL-------SVRFLASPNLKMLKKEVVQVEFSE 173
               Y +K K +SA++AFRKL+++ DSQL       ++  LASPNLK L K  VQV FSE
Sbjct: 110 AVMFYLRKYKPISAMNAFRKLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSE 169

Query: 174 GNEDGFVRKVLERFKDAPNTVVCVLDSFDGNSMKAAELLFKNGFKEAYAIKGGVRGQQGW 233
            +E+GF+ KV   F DA NTVVCVLD+FDGNS K AELL KNGFKEAY I+GG RG+ GW
Sbjct: 170 NDEEGFLTKVKGSFSDAENTVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGW 229

Query: 234 MAIQDTLLPPSLHMYRRKKTKAS 256
           +AIQ+ LLPP +HMY  K  K+S
Sbjct: 230 LAIQEELLPPPVHMYTAKNVKSS 252


>AT4G01050.1 | Symbols: TROL | thylakoid rhodanese-like |
           chr4:455874-458175 FORWARD LENGTH=466
          Length = 466

 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 10/148 (6%)

Query: 97  IDDFFNRYPFFVAGCTFIWLIAIPLAEEYFKKCK---FVSAIDAFRKLRDDPDSQL---- 149
           I +F    P  +AG      +   L++   KK K     SA +A+ KL  D ++QL    
Sbjct: 95  ISNFVTDNPLVIAGGVAALAVPFVLSQVLNKKPKSWGVESAKNAYTKLGTDDNAQLLDIR 154

Query: 150 ---SVRFLASPNLKMLKKEVVQVEFSEGNEDGFVRKVLERFKDAPNTVVCVLDSFDGNSM 206
                R + SPN+K L K+ V   ++  ++ GF++K+  +FKD  NT + +LD FDGNS 
Sbjct: 155 ATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYILDKFDGNSE 214

Query: 207 KAAELLFKNGFKEAYAIKGGVRGQQGWM 234
             AEL+  NGFK AYAIK G  G +GW+
Sbjct: 215 LVAELVALNGFKSAYAIKDGAEGPRGWL 242