Miyakogusa Predicted Gene

Lj1g3v2840270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2840270.1 tr|I4I0E1|I4I0E1_MICAE Peptide chain release
factor 2 OS=Microcystis aeruginosa PCC 9808 GN=prfB
PE=,51.43,4e-19,seg,NULL; coiled-coil,NULL; PCRF,Peptide chain release
factor; PEPTIDE CHAIN RELEASE FACTOR 2,Peptid,CUFF.29595.1
         (238 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G36170.2 | Symbols: HCF109, ATPRFB | high chlorophyll fluores...   209   1e-54
AT5G36170.1 | Symbols: HCF109, ATPRFB | high chlorophyll fluores...   209   1e-54
AT5G36170.3 | Symbols: HCF109, ATPRFB | high chlorophyll fluores...   207   5e-54
AT3G57190.1 | Symbols:  | peptide chain release factor, putative...    64   1e-10

>AT5G36170.2 | Symbols: HCF109, ATPRFB | high chlorophyll
           fluorescent 109 | chr5:14236083-14237974 REVERSE
           LENGTH=455
          Length = 455

 Score =  209 bits (532), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 3/163 (1%)

Query: 64  ENQLSVGEGEDTDTTEWALQAFYSLRKDVEITSQRVEEIRESSGIXXXXXXXXXXXXKAS 123
           E+ LSV    + +T+EW +Q FY+LRKDVEI S RVEEIR S+ +            KA+
Sbjct: 61  ESNLSVSN--ENETSEWLMQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKAT 118

Query: 124 ATSFWDNRAKAQETLSTLSDVKDKINLLAEFKTQVEDAETIVKLTEEMESSIDRALLEEA 183
            TSFWD+R KAQETLS+L+D+KD++ LL+EFKT VEDAETIVKLTEEM+S+ D +LLEEA
Sbjct: 119 DTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMDST-DVSLLEEA 177

Query: 184 TSLIKELNKSLDRFELTQLLSGPYDKEGAVISITAGAGGTDAQ 226
             +IKELNKSLD+FELTQLLSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 178 MGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQ 220


>AT5G36170.1 | Symbols: HCF109, ATPRFB | high chlorophyll
           fluorescent 109 | chr5:14236083-14237974 REVERSE
           LENGTH=456
          Length = 456

 Score =  209 bits (532), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 3/163 (1%)

Query: 64  ENQLSVGEGEDTDTTEWALQAFYSLRKDVEITSQRVEEIRESSGIXXXXXXXXXXXXKAS 123
           E+ LSV    + +T+EW +Q FY+LRKDVEI S RVEEIR S+ +            KA+
Sbjct: 62  ESNLSVSN--ENETSEWLMQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKAT 119

Query: 124 ATSFWDNRAKAQETLSTLSDVKDKINLLAEFKTQVEDAETIVKLTEEMESSIDRALLEEA 183
            TSFWD+R KAQETLS+L+D+KD++ LL+EFKT VEDAETIVKLTEEM+S+ D +LLEEA
Sbjct: 120 DTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMDST-DVSLLEEA 178

Query: 184 TSLIKELNKSLDRFELTQLLSGPYDKEGAVISITAGAGGTDAQ 226
             +IKELNKSLD+FELTQLLSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 179 MGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQ 221


>AT5G36170.3 | Symbols: HCF109, ATPRFB | high chlorophyll
           fluorescent 109 | chr5:14236297-14237974 REVERSE
           LENGTH=391
          Length = 391

 Score =  207 bits (527), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 3/163 (1%)

Query: 64  ENQLSVGEGEDTDTTEWALQAFYSLRKDVEITSQRVEEIRESSGIXXXXXXXXXXXXKAS 123
           E+ LSV    + +T+EW +Q FY+LRKDVEI S RVEEIR S+ +            KA+
Sbjct: 62  ESNLSVSN--ENETSEWLMQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKAT 119

Query: 124 ATSFWDNRAKAQETLSTLSDVKDKINLLAEFKTQVEDAETIVKLTEEMESSIDRALLEEA 183
            TSFWD+R KAQETLS+L+D+KD++ LL+EFKT VEDAETIVKLTEEM+S+ D +LLEEA
Sbjct: 120 DTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKLTEEMDST-DVSLLEEA 178

Query: 184 TSLIKELNKSLDRFELTQLLSGPYDKEGAVISITAGAGGTDAQ 226
             +IKELNKSLD+FELTQLLSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 179 MGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQ 221


>AT3G57190.1 | Symbols:  | peptide chain release factor, putative |
           chr3:21166468-21168198 FORWARD LENGTH=406
          Length = 406

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 2/100 (2%)

Query: 127 FWDNRAKAQETLSTLSDVKDKINLLAEFKTQVEDAETIVKLTEEMESSIDRALLEEATSL 186
            WD+ AK+ E L  L+D    ++ L + K + E+A+ I++L E    +ID +L E+A   
Sbjct: 88  LWDDPAKSDEILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEM--DAIDYSLFEQAYDS 145

Query: 187 IKELNKSLDRFELTQLLSGPYDKEGAVISITAGAGGTDAQ 226
             ++++SL  +E+++LL   YD EGA + I +G+ G  +Q
Sbjct: 146 SLDVSRSLHHYEMSKLLRDQYDAEGACMIIKSGSPGAKSQ 185