Miyakogusa Predicted Gene

Lj1g3v2839210.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2839210.2 Non Chatacterized Hit- tr|C0HG02|C0HG02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,58.9,9e-19,PROKAR_LIPOPROTEIN,NULL; seg,NULL,CUFF.29603.2
         (245 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65270.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   286   7e-78
AT1G65270.3 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   286   7e-78
AT1G65270.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   286   7e-78

>AT1G65270.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endoplasmic
           reticulum, plasma membrane; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 149
           Blast hits to 149 proteins in 49 species: Archae - 0;
           Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47;
           Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
           | chr1:24241855-24244504 FORWARD LENGTH=292
          Length = 292

 Score =  286 bits (733), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 154/176 (87%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           K+QF L+HAFGDSDF+ AG FSARLKTWSHG +TLTKLRF+R+ F+  EK+ F+ LL+GD
Sbjct: 75  KVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAFKNLLKGD 134

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY+IRLPSNV+SPPGR+++++SV+ARCLP DGL+EHF+IH EG NILAV+YG+ GAC Y
Sbjct: 135 DFYRIRLPSNVVSPPGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVSYGSPGACQY 194

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PRQLKLPAKWSF SHT+LK+SEQAPRTPIF EE+LG E ++GE   P ERSFWAKY
Sbjct: 195 PRQLKLPAKWSFNSHTILKSSEQAPRTPIFTEEILGSENVEGEVEPPPERSFWAKY 250


>AT1G65270.3 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endoplasmic
           reticulum, plasma membrane; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 13 growth stages; Has
           35333 Blast hits to 34131 proteins in 2444 species:
           Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi -
           991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610
           (source: NCBI BLink). | chr1:24241855-24244504 FORWARD
           LENGTH=292
          Length = 292

 Score =  286 bits (733), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 154/176 (87%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           K+QF L+HAFGDSDF+ AG FSARLKTWSHG +TLTKLRF+R+ F+  EK+ F+ LL+GD
Sbjct: 75  KVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAFKNLLKGD 134

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY+IRLPSNV+SPPGR+++++SV+ARCLP DGL+EHF+IH EG NILAV+YG+ GAC Y
Sbjct: 135 DFYRIRLPSNVVSPPGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVSYGSPGACQY 194

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PRQLKLPAKWSF SHT+LK+SEQAPRTPIF EE+LG E ++GE   P ERSFWAKY
Sbjct: 195 PRQLKLPAKWSFNSHTILKSSEQAPRTPIFTEEILGSENVEGEVEPPPERSFWAKY 250


>AT1G65270.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endoplasmic
           reticulum, plasma membrane; EXPRESSED IN: 24 plant
           structures; EXPRESSED DURING: 13 growth stages; Has 149
           Blast hits to 149 proteins in 49 species: Archae - 0;
           Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47;
           Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
           | chr1:24241855-24244504 FORWARD LENGTH=292
          Length = 292

 Score =  286 bits (733), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 127/176 (72%), Positives = 154/176 (87%)

Query: 69  KIQFILQHAFGDSDFTDAGNFSARLKTWSHGAQTLTKLRFTRDTFTDVEKNKFQELLQGD 128
           K+QF L+HAFGDSDF+ AG FSARLKTWSHG +TLTKLRF+R+ F+  EK+ F+ LL+GD
Sbjct: 75  KVQFTLEHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAFKNLLKGD 134

Query: 129 DFYKIRLPSNVLSPPGRDYIVSSVKARCLPGDGLEEHFVIHTEGVNILAVNYGAHGACPY 188
           DFY+IRLPSNV+SPPGR+++++SV+ARCLP DGL+EHF+IH EG NILAV+YG+ GAC Y
Sbjct: 135 DFYRIRLPSNVVSPPGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVSYGSPGACQY 194

Query: 189 PRQLKLPAKWSFKSHTVLKNSEQAPRTPIFAEEVLGGEGIDGETIKPIERSFWAKY 244
           PRQLKLPAKWSF SHT+LK+SEQAPRTPIF EE+LG E ++GE   P ERSFWAKY
Sbjct: 195 PRQLKLPAKWSFNSHTILKSSEQAPRTPIFTEEILGSENVEGEVEPPPERSFWAKY 250