Miyakogusa Predicted Gene

Lj1g3v2838150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2838150.1 Non Chatacterized Hit- tr|I3RZK7|I3RZK7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.71,0,BIOTIN,Biotin-binding site; Single hybrid motif,Single
hybrid motif; seg,NULL; BIOTINYL_LIPOYL,Bioti,CUFF.29588.1
         (131 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier p...   117   2e-27
AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic ...   115   1e-26
AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 ...    69   6e-13

>AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier
           protein 2 | chr5:5038955-5040437 FORWARD LENGTH=255
          Length = 255

 Score =  117 bits (293), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/80 (70%), Positives = 64/80 (80%)

Query: 52  SSHPPLKSPMAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIEADQSGTVVD 111
           SSHPPLKSPMAGTFYRSP PGEP F            +CIIEAMKLMNEIEA++SGT+++
Sbjct: 176 SSHPPLKSPMAGTFYRSPGPGEPPFVKVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIME 235

Query: 112 VIAEDGKSVSVDTPLFVIEP 131
           ++AEDGK VSVDTPLFVI P
Sbjct: 236 LLAEDGKPVSVDTPLFVIAP 255


>AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic
           acetylcoenzyme A carboxylase 1 | chr5:5361098-5363020
           REVERSE LENGTH=280
          Length = 280

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 61/77 (79%)

Query: 55  PPLKSPMAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIEADQSGTVVDVIA 114
           P +KSPMAGTFYRSPAPGEP F            LCI+EAMKLMNEIE+D +GTVVD++A
Sbjct: 204 PTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIVA 263

Query: 115 EDGKSVSVDTPLFVIEP 131
           EDGK VS+DTPLFV++P
Sbjct: 264 EDGKPVSLDTPLFVVQP 280


>AT5G16390.2 | Symbols: CAC1, CAC1A, BCCP, BCCP1, CAC1-A, BCCP-1 |
           chloroplastic acetylcoenzyme A carboxylase 1 |
           chr5:5361554-5363020 REVERSE LENGTH=254
          Length = 254

 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 34/48 (70%)

Query: 55  PPLKSPMAGTFYRSPAPGEPAFXXXXXXXXXXXXLCIIEAMKLMNEIE 102
           P +KSPMAGTFYRSPAPGEP F            LCI+EAMKLMNEIE
Sbjct: 204 PTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIE 251