Miyakogusa Predicted Gene

Lj1g3v2837040.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2837040.1 tr|A8IVH2|A8IVH2_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CGL52 PE=4 SV=1,29.12,1e-18,seg,NULL;
DUF2358,Protein of unknown function DUF2358,CUFF.29575.1
         (309 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65230.1 | Symbols:  | Uncharacterized conserved protein (DUF...   355   2e-98

>AT1G65230.1 | Symbols:  | Uncharacterized conserved protein
           (DUF2358) | chr1:24229167-24230764 FORWARD LENGTH=286
          Length = 286

 Score =  355 bits (910), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 171/263 (65%), Positives = 207/263 (78%), Gaps = 9/263 (3%)

Query: 47  HHHSFLLRVANDADRTELPSDAATETSYSDVDKIVDGLDFGELCNDFECISSPLVESTAR 106
           HH   L +V ND+ RTE+  D       S+VDK+VD +DFGELCNDFEC SSP VESTAR
Sbjct: 33  HHR--LPQVMNDSTRTEVSIDK------SEVDKLVDKIDFGELCNDFECTSSPQVESTAR 84

Query: 107 QLVRDILELREGNRALGTFAFSVRYKDPIRSFTGRDKYKRSLWATSALENPSVTVQEMVM 166
           QLVRDILE+REGNRA   +A SV+YKDP+RSFTGR+KYKR +W TS LENP+VTVQEMVM
Sbjct: 85  QLVRDILEIREGNRAFACYAVSVKYKDPVRSFTGREKYKRPMWITSGLENPTVTVQEMVM 144

Query: 167 LSTSVLSIKWTMKGKPKSFIARVGGDVILRITSKFTLNQISGQVIEHEEFWDLXXXXXXX 226
           LSTSVL IKWT+KGKPKS +A V GD+I+++ S+FTLNQISGQV EHEE WDL       
Sbjct: 145 LSTSVLRIKWTVKGKPKSILAAVSGDLIVKVKSEFTLNQISGQVFEHEESWDLSSSSPIA 204

Query: 227 XXFFWTSRALFATVESVKDLGDSAKNMSSNFESEKENLEIYPDPSGDPTKFFQRDDSFQQ 286
             +FWTSR LFA  ES KD+ D  K++++N  + KE+ +IY DP+ DP KFFQRD+SF++
Sbjct: 205 QAYFWTSRRLFAASESAKDVADVTKDLTANLTTRKEDTDIYRDPT-DPNKFFQRDNSFER 263

Query: 287 DVYQIALFLAILYFVVQFLRTTL 309
           DVYQIALFLAI+YFVVQFL+ T+
Sbjct: 264 DVYQIALFLAIVYFVVQFLKNTI 286