Miyakogusa Predicted Gene

Lj1g3v2835980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2835980.1 Non Chatacterized Hit- tr|I1N3Z5|I1N3Z5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49977
PE,82.87,0,eubact_ribD: riboflavin biosynthesis protein
RibD,Riboflavin biosynthesis protein RibD; ribD_Cterm: ,CUFF.29568.1
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47390.2 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase...   888   0.0  
AT3G47390.1 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase...   827   0.0  
AT4G20960.1 | Symbols:  | Cytidine/deoxycytidylate deaminase fam...    97   3e-20

>AT3G47390.2 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase
           family protein | chr3:17462094-17464655 FORWARD
           LENGTH=596
          Length = 596

 Score =  888 bits (2294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/579 (73%), Positives = 501/579 (86%), Gaps = 8/579 (1%)

Query: 16  SSIICKCTKPSTN-----HALDAAYIKRAALIADKSAGFTAPHPNFGCVIATPSGDVAGE 70
           S +IC+ T  + +     H  DAA+I+RAA +++ SAG T+PHPNFGCVIAT SG VAGE
Sbjct: 11  SPLICRATLSNGDNSRNYHTTDAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGE 70

Query: 71  GYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALLQGGVKRVVIGMR 130
           GYLYA+GT PAE  AV AAGE  RGATAYLNMEPGDCH D  AVSAL+Q G++RVV+G+R
Sbjct: 71  GYLYAQGTKPAEALAVEAAGEFSRGATAYLNMEPGDCHGDHTAVSALVQAGIERVVVGIR 130

Query: 131 HPLQHHRGNAVRALRGEGLQVDLLGEDLTSKLVEDAQKECLLVNAPLICRATSRIPFSVL 190
           HPLQH RG+A+R LR  G++V++LGED  SK++EDA+K CLLVNAPLI RA SR+PFSVL
Sbjct: 131 HPLQHLRGSAIRELRSHGIEVNVLGEDFESKVLEDARKSCLLVNAPLIHRACSRVPFSVL 190

Query: 191 KYAMTLDGKIAASSGHASWISSKESRNLVFDLRGRSDAVIVGGNTVRKDNPRLTVRHGGG 250
           KYAMTLDGKIAASSGHA+WISSK SR  VF+LRG SDAVIVGGNTVR+D+PRLT RHG G
Sbjct: 191 KYAMTLDGKIAASSGHAAWISSKLSRTRVFELRGGSDAVIVGGNTVRQDDPRLTARHGQG 250

Query: 251 RMPVRIVMSQTLNLPDEAHLWDTSEVSTMVVTQRGARRSFQKLLASKGVEVVEFDMLNSQ 310
             P RIVM+Q+L+LP++A+LWD SEVST+VVTQRGAR+SFQKLLASKGVEVVEFDMLN +
Sbjct: 251 HTPTRIVMTQSLDLPEKANLWDVSEVSTIVVTQRGARKSFQKLLASKGVEVVEFDMLNPR 310

Query: 311 DVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVFAFIAPKIIGGKNAPSPVGELGMVE 370
           +VMEYFH RGYLSILWECGGTLAASAISS VIHKV AF+APKIIGG  APSPVG+LGMVE
Sbjct: 311 EVMEYFHLRGYLSILWECGGTLAASAISSSVIHKVVAFVAPKIIGGSKAPSPVGDLGMVE 370

Query: 371 MSQALNLIDVRYEQVGPDMLVSGFLQPLPDMVPVIPSLEETFVVDPTISRYESSIIFFYK 430
           M+QALNLIDV YEQVGPDMLVSGFLQP+PD++PVIPS + T  +DP++  +E SIIFFYK
Sbjct: 371 MTQALNLIDVCYEQVGPDMLVSGFLQPIPDLLPVIPSEDATVEIDPSVDPFEPSIIFFYK 430

Query: 431 TWDPYGAFSNFSPHAIQMP--DENGDYVTWSSVEHFYQAHKFVGADDACA-DCVERIKSA 487
           TWD YG+FSNFSPH I+MP  +EN DY+TWSSVEH+YQA+KFVG ++  A DCVE+I++A
Sbjct: 431 TWDLYGSFSNFSPHPIRMPYGEENDDYMTWSSVEHYYQANKFVGVENPKAYDCVEKIRTA 490

Query: 488 KSPEEAAKIGRSMQRKRPDLVRPGWDNMKIDVMYRALKCKFSMYPHLKSMLLATAGCVLV 547
           +SPEEAA IGRS  R++P+LVR  W+++KI+VMY+ALKCKFS YPHLKSMLL+T G VLV
Sbjct: 491 RSPEEAALIGRSTLRQKPELVRNDWEDVKIEVMYKALKCKFSTYPHLKSMLLSTIGTVLV 550

Query: 548 EASPHDLFWGGGRQGDGLNYLGQLLMKLRSEFLGESSSS 586
           EASPHDLFWGGGR+G+GLNYLG+LLM+LRSE+LGESS S
Sbjct: 551 EASPHDLFWGGGREGEGLNYLGRLLMQLRSEYLGESSVS 589


>AT3G47390.1 | Symbols: PHS1 | cytidine/deoxycytidylate deaminase
           family protein | chr3:17462094-17464655 FORWARD
           LENGTH=599
          Length = 599

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/588 (69%), Positives = 484/588 (82%), Gaps = 23/588 (3%)

Query: 16  SSIICKCTKPSTN-----HALDAAYIKRAALIADKSAGFTAPHPNFGCVIATPSGDVAGE 70
           S +IC+ T  + +     H  DAA+I+RAA +++ SAG T+PHPNFGCVIAT SG VAGE
Sbjct: 11  SPLICRATLSNGDNSRNYHTTDAAFIRRAADLSEMSAGLTSPHPNFGCVIATSSGKVAGE 70

Query: 71  GYLYAEGTTPAEVQAVTAAGERCRGATAYLNMEPGDCHADSAAVSALLQGGVKRVVIGMR 130
           GYLYA+GT PAE  AV AAGE  RGATAYLNMEPGDCH D  AVSAL+Q G++RVV+G+R
Sbjct: 71  GYLYAQGTKPAEALAVEAAGEFSRGATAYLNMEPGDCHGDHTAVSALVQAGIERVVVGIR 130

Query: 131 HPLQHHRGNAVRALRGEGLQVDLLGEDLTSKLVEDAQKECLLVNAPLICRATSRIPFSVL 190
           HPLQH RG+A+R LR  G++V++LGED  SK++EDA+K CLLVNAPLI RA SR+PFSVL
Sbjct: 131 HPLQHLRGSAIRELRSHGIEVNVLGEDFESKVLEDARKSCLLVNAPLIHRACSRVPFSVL 190

Query: 191 KYAMTLDGKIAASSGHASWISSKESRNLVFDLRGRSDAVIVGGNTVRKDNPRLTVRHGGG 250
           KYAMTLDGKIAASSGHA+WISSK SR  VF+LRG SDAVIVGGNTVR+D+PRLT RHG G
Sbjct: 191 KYAMTLDGKIAASSGHAAWISSKLSRTRVFELRGGSDAVIVGGNTVRQDDPRLTARHGQG 250

Query: 251 RMPVRIVMSQTLNLPDEAHLWDTSEVSTMVVTQRGARRSFQKLLASKGVEVVEFDMLNSQ 310
             P RIVM+Q+L+LP++A+LWD SEVST+VVTQRGAR+SFQKLLASKGVEVVEFDMLN +
Sbjct: 251 HTPTRIVMTQSLDLPEKANLWDVSEVSTIVVTQRGARKSFQKLLASKGVEVVEFDMLNPR 310

Query: 311 DVMEYFHDRGYLSILWECGGTLAASAISSGVIHKVFAFIAPKIIGGKNAPSPVGELGMVE 370
           +VMEYFH RGYLSILWECGGTLAASAISS VIHKV AF+APKIIGG  APSPVG+LGMVE
Sbjct: 311 EVMEYFHLRGYLSILWECGGTLAASAISSSVIHKVVAFVAPKIIGGSKAPSPVGDLGMVE 370

Query: 371 MSQALNLIDVRYEQVGPDMLVSGFLQPLPDMVPVIPSLEETFVVDPTISRYESSIIFFYK 430
           M+QALNLIDV YEQVGPDMLVSGFLQP+PD++PVIPS + T  +DP++  +E SIIFFYK
Sbjct: 371 MTQALNLIDVCYEQVGPDMLVSGFLQPIPDLLPVIPSEDATVEIDPSVDPFEPSIIFFYK 430

Query: 431 TWDPYGAFSNFSPHAIQMPDENGDYVTWS---SVEH--------FYQAHKFVGADDACA- 478
           TWD YG ++      I +      +V W    S +H          +A+KFVG ++  A 
Sbjct: 431 TWDLYGMWN------ITIRYHTTVHVKWYLALSKKHNLLILHPKTLKANKFVGVENPKAY 484

Query: 479 DCVERIKSAKSPEEAAKIGRSMQRKRPDLVRPGWDNMKIDVMYRALKCKFSMYPHLKSML 538
           DCVE+I++A+SPEEAA IGRS  R++P+LVR  W+++KI+VMY+ALKCKFS YPHLKSML
Sbjct: 485 DCVEKIRTARSPEEAALIGRSTLRQKPELVRNDWEDVKIEVMYKALKCKFSTYPHLKSML 544

Query: 539 LATAGCVLVEASPHDLFWGGGRQGDGLNYLGQLLMKLRSEFLGESSSS 586
           L+T G VLVEASPHDLFWGGGR+G+GLNYLG+LLM+LRSE+LGESS S
Sbjct: 545 LSTIGTVLVEASPHDLFWGGGREGEGLNYLGRLLMQLRSEYLGESSVS 592


>AT4G20960.1 | Symbols:  | Cytidine/deoxycytidylate deaminase family
           protein | chr4:11212077-11213530 FORWARD LENGTH=426
          Length = 426

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 179/376 (47%), Gaps = 35/376 (9%)

Query: 32  DAAYIKRAALIADKSAGFTAPHPNFGCVIATPSGDVAGEGYLYAEGTTPAEVQAVTAAGE 91
           D+ Y+++   +A ++ G T+P+P  GCVI    GD+ G+G+    G   AEV A+  AGE
Sbjct: 74  DSFYMRKCVELAKRAIGCTSPNPMVGCVIVK-DGDIVGQGFHPKAGQPHAEVFALRDAGE 132

Query: 92  RCRGATAYLNMEPGDCHADS-AAVSALLQGGVKRVVIGMRHPLQHHRGNAVRALRGEGLQ 150
               ATAY+++EP + +  +     AL++  V+RVVIGM  P      + +  L+  G+ 
Sbjct: 133 LAENATAYVSLEPCNHYGRTPPCTEALIKAKVRRVVIGMVDPNPIVFSSGISRLKDAGI- 191

Query: 151 VDLLGEDLTSKLVEDAQKECLLVNAPLICRATSRIPFSVLKYAMTLDGKIAASSGHASWI 210
                 D+T  + E+    C  +N   I R  +  PF  L+Y+M+++G +    G     
Sbjct: 192 ------DVTVSVEEEL---CKKMNEGFIHRMLTGKPFLALRYSMSVNGCLLDKIGQG--- 239

Query: 211 SSKESRNLVFDLRGRSDAVIVGGNTVRKDNPRLTVRHGGGRM-PVRIVM---SQTLNLPD 266
            + +S      L    DA+I+  +   + +   +       + P++I++   +Q  ++  
Sbjct: 240 -ASDSGGYYSKLLQEYDAIILSSSLSDELSSISSQEAINVSIQPIQIIVASNAQQSHILA 298

Query: 267 EAHLWDTSEVSTMVVTQRGARRSF-QKLLASKGVEVVEFDMLNSQDVMEYFHDRGYLSIL 325
            +H  + S    +V T   A+ S  +  ++S GVE V  + +N   +++Y ++RG  S+L
Sbjct: 299 SSHTVEESGPKVVVFT---AKESVAESGISSSGVETVVLEKINLDSILDYCYNRGLCSVL 355

Query: 326 WECGGT------LAASAISSGVIHKVFAFIAPKIIGGKNAPSPVGELGMVEMSQALNLID 379
            +  G       L        ++ KV   + P+      +     ++  ++  ++ ++ D
Sbjct: 356 LDLRGNVKDLEVLLRDGFEQKLLQKVIIEVLPEW-----STKDERQIASMKWLESKHVKD 410

Query: 380 VRYEQVGPDMLVSGFL 395
           ++ +Q+G  +L+ G+ 
Sbjct: 411 LQSKQLGGSVLLEGYF 426