Miyakogusa Predicted Gene
- Lj1g3v2822810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2822810.1 tr|Q769D0|Q769D0_ORYSI Fertility restorer
OS=Oryza sativa subsp. indica GN=Rf-1B PE=2
SV=1,22.77,2e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; PPR_2,P,CUFF.29559.1
(449 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 1e-93
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 2e-48
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 2e-47
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 5e-47
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 184 9e-47
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 182 5e-46
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 181 6e-46
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 181 8e-46
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 2e-45
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 3e-45
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 177 1e-44
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 8e-44
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 4e-43
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 9e-43
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 9e-43
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 170 2e-42
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 6e-42
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 6e-42
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 8e-42
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 1e-41
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 167 1e-41
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 165 6e-41
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 1e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 164 1e-40
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 3e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 6e-40
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 8e-40
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 161 8e-40
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 159 3e-39
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 159 5e-39
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 7e-39
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 152 3e-37
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 8e-36
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 145 5e-35
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 2e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 143 3e-34
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 3e-34
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 9e-34
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 4e-33
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 132 4e-31
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 127 2e-29
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 126 3e-29
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 124 1e-28
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 122 7e-28
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 120 2e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 3e-27
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 116 4e-26
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 9e-26
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 112 4e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 112 5e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 3e-23
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 5e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 1e-20
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 96 5e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 8e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 93 5e-19
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 92 5e-19
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 91 1e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 4e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 4e-18
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 87 2e-17
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 9e-17
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 84 2e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 84 3e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 83 3e-16
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 80 2e-15
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 3e-15
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 80 3e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 77 2e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 77 3e-14
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 77 3e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 75 1e-13
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 75 1e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 74 1e-13
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 74 2e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 74 2e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 72 6e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 72 7e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 71 1e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 71 2e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 70 3e-12
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 70 3e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 69 5e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 5e-12
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 5e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 9e-12
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 67 2e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 66 6e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 65 9e-11
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 61 1e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 61 1e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 60 3e-09
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 60 4e-09
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 4e-09
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 4e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 59 5e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 59 9e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 57 2e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 3e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 56 4e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 54 3e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/461 (40%), Positives = 269/461 (58%), Gaps = 39/461 (8%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
M M + ++KFKEF++ +FLD V YN+ FDAL KLG+V++A E+ +E++ + I D+ +
Sbjct: 366 MDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVIN 425
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
YTTLI GYCLQG ++DA + +EM G PD++TYNVL +G+ RN + ++ M+
Sbjct: 426 YTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMK 485
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
++G +PN+ T+ +IIEGLC KV EAE F+ L+ K E ++ V GYCEA
Sbjct: 486 AEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAG------- 538
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
L +KAY+ F+ L ++ KL LC+ G + KA +
Sbjct: 539 -----------------LSKKAYKAFVRLEYP---LRKSVYIKLFFSLCIEGYLEKAHDV 578
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
L+ M + VEP + M ++ A C + + A+ LFD+ V RG PD+ TYT MI++YCR
Sbjct: 579 LKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCR 638
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLL------------YGSFKNAAALDVINTIWR 348
+N L++A LF+DMK+RGIKPDV+TYTVLL S + + + R
Sbjct: 639 LNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLR 698
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+ I LDVVCY+VLI+ K +N E A LF+ MID GLEPD V YT +IS Y++KG
Sbjct: 699 EFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
+ A L+ E+S K PS +AV + LKA++ Q+ E
Sbjct: 759 YIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQYGE 799
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 172/380 (45%), Gaps = 17/380 (4%)
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
I+ L+K Y G +A + + K DI N L + + + + F
Sbjct: 146 IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFK 205
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYC------- 170
+++ G+ N T+ ++++ LC G + EA ++++SV Y +NG C
Sbjct: 206 QLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL--IENESVFGYKTFINGLCVTGETEK 263
Query: 171 ------EASNNNNNYGDD-KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK 223
E + GDD ++ + G+C ++ A + +E+ G +C
Sbjct: 264 AVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLA 323
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ + C ++ +A+ L+ M ++ + ++ S++L C + A F F
Sbjct: 324 VIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMN 383
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
D V Y ++ ++ ++EA +L Q+MK RGI PDVI YT L+ G +D +
Sbjct: 384 IFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDAL 443
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ I +M +S D++ Y+VL++GL + + E+ + ++E M +G +P+ VT + +I
Sbjct: 444 DLI-DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEG 502
Query: 404 YYKKGLMKEASELLDEMSSK 423
+KEA + + K
Sbjct: 503 LCFARKVKEAEDFFSSLEQK 522
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 183/421 (43%), Gaps = 44/421 (10%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+GM + D + K +D A N + + + + GK+ + + ++L+ + +
Sbjct: 159 LGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYT 218
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM- 119
Y ++K C +GNL +A + E + Y G+C E A+ E+
Sbjct: 219 YAIVVKALCRKGNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELI 272
Query: 120 --ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK--SVEIYS--AMVNGYCEAS 173
+ + M++ G C+ K+ AE+ +++ +++Y+ A+++ YC+
Sbjct: 273 DRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNM 332
Query: 174 NNNNNYGD-DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
N G DK +V V L+ + Y K + C + L K
Sbjct: 333 NLPEALGFLDKMLGKGLKVNCVIVSLILQCY------------CKMDMCLEALEK----- 375
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ R +N+ ++ Y++ DAL +G+ + A L RG PDV+ YT
Sbjct: 376 --------FKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
T+I+ YC + +ALDL +M G+ PD+ITY VL+ G +N +V+ I+ MK
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE-IYERMKA 486
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+ V SV+I GL ++A F + K E +K ++ + Y + GL K+
Sbjct: 487 EGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPE-NKASF---VKGYCEAGLSKK 542
Query: 413 A 413
A
Sbjct: 543 A 543
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 256/507 (50%), Gaps = 89/507 (17%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG S+ D FKEF+E+ + LD V YN+ FDAL KLGKV++AIE+ E+ K I D+ +
Sbjct: 374 MGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVIN 433
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
YTTLI G CLQG DAF + EM G PDIV YNVLA G+ N A+ A ME
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
+ GV+P TH M+IEGL G++ +AEA + L+ KS E ++MV G+C A
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAG------- 546
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD-IGKAMK 239
++ A+E F+ L + F L T LC D I KA
Sbjct: 547 -----------------CLDHAFERFIRLEFP---LPKSVYFTLFTSLCAEKDYISKAQD 586
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
LL+ M L VEP + MY ++ A C V + AR F+ V + PD+ TYT MIN+YC
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF-----KNAAALDVIN---------- 344
R+N K+A LF+DMKRR +KPDV+TY+VLL + A DVI
Sbjct: 647 RLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMIN 706
Query: 345 ------------TIWRDMKQTEISLDVVC----------------------------YSV 364
+++DMK+ EI DVV Y+V
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTV 766
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI+ K + +A R+F+ MI+ G++PD YT +I+ K G +KEA + D M G
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 425 ----MTPSSHIISAVNRS--ILKARKV 445
+ P + +I+ R+ +LKA K+
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKL 853
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 168/411 (40%), Gaps = 60/411 (14%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + + K + G+ V +N+V + L G++D A E L K+ + D
Sbjct: 480 GLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND---- 535
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+++KG+C G L AF F ++ P V + + + D A + D M
Sbjct: 536 ASMVKGFCAAGCLDHAFERFIRLEFP--LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWK 593
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
GVEP + + +I C V V +A F L K + Y+ M+N YC +
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQ 653
Query: 178 NYG-------DDKSPTPISEV--------------------------------GYCKVDL 198
Y D P ++ YC ++
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLND 713
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
++K Y LF D+ + E ++T L+ + L M++ +V+P Y++
Sbjct: 714 LKKVYALF------KDMKRREIVPDVVTYTVLLKN-KPERNLSREMKAFDVKPDVFYYTV 766
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++D C +G A+ +FD + G PD YT +I C+M LKEA +F M G
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTI----WRDMKQTEISLDVVCYSVL 365
+KPDV+ YT L+ G +N L + + + +K T+ SL V Y+ L
Sbjct: 827 VKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKL 877
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 179/457 (39%), Gaps = 68/457 (14%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ + G D A N + + G+ D + E+ +D D Y +++
Sbjct: 170 FRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWR 229
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST- 129
+ + + + + + V Y G+C N +A + + + +
Sbjct: 230 NDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSD 289
Query: 130 ---THKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDD 182
++ ++ GLC ++ +AE+ ++ D V +YSA++ G+ + N
Sbjct: 290 LGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMN-------- 341
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF---KLLTKLCLVGDIGKAMK 239
+ KA ++F ++ K K +C +L C +G+ +A
Sbjct: 342 ----------------IPKAVDVFNKMLKK---RKRINCVIVSSILQCYCQMGNFSEAYD 382
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
L + R N+ ++ Y++ DAL +GK + A LF G+G PDV+ YTT+I C
Sbjct: 383 LFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC 442
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+A DL +M G PD++ Y VL G N A + T+ + M+ +
Sbjct: 443 LQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL-KMMENRGVKPTY 501
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE---------------------------- 391
V ++++I GL+ + A +E + K E
Sbjct: 502 VTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP 561
Query: 392 -PDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
P V +T SL +K + +A +LLD M G+ P
Sbjct: 562 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEP 598
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 161/384 (41%), Gaps = 30/384 (7%)
Query: 52 KNIDLDIKHYTTLIKGYC---LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDE 108
+++ L I+ T L+K Y + ID F F + G PDI N L + + +
Sbjct: 140 QSLVLLIRVSTALVKAYANLDMFDEAIDIF--FRAYYSLGRAPDIKALNFLISRMIASGR 197
Query: 109 ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSA 164
+ + + F E+E G++ ++ T+ ++++ L E E +RL Y
Sbjct: 198 SDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLN 257
Query: 165 MVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ G C ++++ Y + + A + ++ S+ G + K+
Sbjct: 258 FIEGLCL--------------NQMTDIAYFLLQPLRDA-NILVDKSDLGIAYR-----KV 297
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+ LC I A ++ M ++P +YS +++ A +F+ + +
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK 357
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+ V ++++ YC+M + EA DLF++ + I D + Y V K + I
Sbjct: 358 RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIE 417
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++R+M I+ DV+ Y+ LI G DA L +M G PD V Y +
Sbjct: 418 -LFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
GL +EA E L M ++G+ P+
Sbjct: 477 ATNGLAQEAFETLKMMENRGVKPT 500
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 218/449 (48%), Gaps = 16/449 (3%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+EF E G+ + +YNIV +C+LG++ +A + + +K D+ Y+T++ GYC
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L + + MK KG KP+ Y + +CR + A F EM G+ P++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNN-------NNNY 179
+ +I+G C G + A F + + + Y+A+++G+C+ + + +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 180 GDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
P ++ GYCK ++ A+ + + G + L+ LC GD+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A +LL M + ++P+ Y+ +++ LC G + A L F G D VTYTT++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++YC+ + +A ++ ++M +G++P ++T+ VL+ G F L+ + M I
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG-FCLHGMLEDGEKLLNWMLAKGI 592
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ + ++ L+ +N + A +++DM +G+ PD TY +++ + K MKEA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARK 444
L EM KG + S S + + LK +K
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 29/390 (7%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ F E G+ D V Y + D CK G + A + E+ ++I D+ YT +I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G++++A +F+EM KG +PD VT+ L G C+ + A + M G PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ +I+GLC G + A + + ++ Y+++VNG C++ N
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN---------- 506
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
+E+A +L E G A + L+ C G++ KA ++L+ M
Sbjct: 507 --------------IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
++P+ + ++++++ C G + L + + +G P+ T+ +++ YC N+L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
K A +++DM RG+ PD TY L+ G K A + ++++MK S+ V YSV
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
LI G +K + +A +F+ M +GL DK
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
C++ +++A+ L L + KG S ++ C G++ K KL+E M+ ++P+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+Y ++ LC + K A F + +G PD V YTT+I+ +C+ ++ A F +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M R I PDV+TYT ++ G F + ++ +M + D V ++ LING K
Sbjct: 377 MHSRDITPDVLTYTAIISG-FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIIS 433
+ +DA R+ MI G P+ VTYT +I K+G + A+ELL EM G+ P+ +
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 434 AVNRSILKARKVQ 446
++ + K+ ++
Sbjct: 496 SIVNGLCKSGNIE 508
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 41/269 (15%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKL---CLVGDIGKAMKLLETMRSLNVEPSQI 254
L+ +A +F ++ N G + +SC LT+L C A+ + + V +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFREFPEVGVCWNVA 247
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+IV+ +C +G+ K A L +G+TPDV++Y+T++N YCR L + L + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 315 KRRGIK-----------------------------------PDVITYTVLLYGSFKNAAA 339
KR+G+K PD + YT L+ G F
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG-FCKRGD 366
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ + + +M +I+ DV+ Y+ +I+G + + +A +LF +M KGLEPD VT+T+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPS 428
+I+ Y K G MK+A + + M G +P+
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%)
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
L+EA +F+ M G+ V + V L K+ ++R+ + + +V Y+
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++I+ + + ++A L M KG PD ++Y+ +++ Y + G + + +L++ M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 424 GMTPSSHIISAV 435
G+ P+S+I ++
Sbjct: 311 GLKPNSYIYGSI 322
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 218/449 (48%), Gaps = 16/449 (3%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+EF E G+ + +YNIV +C+LG++ +A + + +K D+ Y+T++ GYC
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L + + MK KG KP+ Y + +CR + A F EM G+ P++
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNN-------NNNY 179
+ +I+G C G + A F + + + Y+A+++G+C+ + + +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 180 GDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
P ++ GYCK ++ A+ + + G + L+ LC GD+
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A +LL M + ++P+ Y+ +++ LC G + A L F G D VTYTT++
Sbjct: 474 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++YC+ + +A ++ ++M +G++P ++T+ VL+ G F L+ + M I
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG-FCLHGMLEDGEKLLNWMLAKGI 592
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ + ++ L+ +N + A +++DM +G+ PD TY +++ + K MKEA
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARK 444
L EM KG + S S + + LK +K
Sbjct: 653 LFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 29/390 (7%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ F E G+ D V Y + D CK G + A + E+ ++I D+ YT +I G+
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G++++A +F+EM KG +PD VT+ L G C+ + A + M G PN
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ +I+GLC G + A + + ++ Y+++VNG C++ N
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN---------- 506
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
+E+A +L E G A + L+ C G++ KA ++L+ M
Sbjct: 507 --------------IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
++P+ + ++++++ C G + L + + +G P+ T+ +++ YC N+L
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
K A +++DM RG+ PD TY L+ G K A + ++++MK S+ V YSV
Sbjct: 613 KAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
LI G +K + +A +F+ M +GL DK
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 1/253 (0%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
C++ +++A+ L L + KG S ++ C G++ K KL+E M+ ++P+
Sbjct: 257 CQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNS 316
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+Y ++ LC + K A F + +G PD V YTT+I+ +C+ ++ A F +
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M R I PDV+TYT ++ G F + ++ +M + D V ++ LING K
Sbjct: 377 MHSRDITPDVLTYTAIISG-FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAG 435
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIIS 433
+ +DA R+ MI G P+ VTYT +I K+G + A+ELL EM G+ P+ +
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 495
Query: 434 AVNRSILKARKVQ 446
++ + K+ ++
Sbjct: 496 SIVNGLCKSGNIE 508
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 41/269 (15%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKL---CLVGDIGKAMKLLETMRSLNVEPSQI 254
L+ +A +F ++ N G + +SC LT+L C A+ + + V +
Sbjct: 190 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFREFPEVGVCWNVA 247
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+IV+ +C +G+ K A L +G+TPDV++Y+T++N YCR L + L + M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 315 KRRGIK-----------------------------------PDVITYTVLLYGSFKNAAA 339
KR+G+K PD + YT L+ G F
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG-FCKRGD 366
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ + + +M +I+ DV+ Y+ +I+G + + +A +LF +M KGLEPD VT+T+
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPS 428
+I+ Y K G MK+A + + M G +P+
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 68/132 (51%)
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
L+EA +F+ M G+ V + V L K+ ++R+ + + +V Y+
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++I+ + + ++A L M KG PD ++Y+ +++ Y + G + + +L++ M K
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 424 GMTPSSHIISAV 435
G+ P+S+I ++
Sbjct: 311 GLKPNSYIYGSI 322
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 199/421 (47%), Gaps = 29/421 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++E SG+ ++ NI+ +ALCK GK++ +++ K + DI Y TLI Y
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G + +AF + N M KGF P + TYN + G+C++ + A F EM G+ P+STT
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPT 186
++ ++ C G V E E F+ ++ + V +S+M++ + + N
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN------------ 390
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
++KA F + G I L+ C G I AM L M
Sbjct: 391 ------------LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ Y+ +L LC A LF+ R PD T T +I+ +C++ +L+
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A++LFQ MK + I+ DV+TY LL G F +D IW DM EI + YS+L+
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDG-FGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
N L + +A R++++MI K ++P + MI Y + G + L++M S+G
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 617
Query: 427 P 427
P
Sbjct: 618 P 618
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 202/420 (48%), Gaps = 25/420 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E SG+ D Y + CK G V + ++ ++R +++ D+ +++++ +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GNL A FN +K G PD V Y +L G CR VA+N +EM G + T
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ I+ GLC +GEA+ FN + ++++ + D + T + +
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERAL-------------------FPDSYTLTILID 488
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
G+CK+ ++ A ELF ++ K + LL VGDI A ++ M S +
Sbjct: 489 -GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P+ I YSI+++ALC G A ++D + + P V+ +MI YCR + +
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+ M G PD I+Y L+YG + + A ++ + + +Q + DV Y+ +++
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM--EEEQGGLVPDVFTYNSILH 665
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
G + + ++A + MI++G+ PD+ TYT MI+ + + + EA + DEM +G +P
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 42/437 (9%)
Query: 29 VFDALCKL----GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
VFD L + K+ +A E LR K + I LI G + A+ ++ E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G ++ T N++ +C++ + +++ GV P+ T+ +I S G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 145 GEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
EA N + K V Y+ ++NG C+ + Y +++ +E+ +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCK----HGKY--ERAKEVFAEMLRSGLSPDS 340
Query: 201 KAYE-LFLELSNKGDIAKEESCF----------------KLLTKLCLVGDIGKAMKLLET 243
Y L +E KGD+ + E F +++ G++ KA+ +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
++ + P ++Y+I++ C G A +L + + +G DVVTY T+++ C+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLD 358
L EA LF +M R + PD T T+L+ G+ +NA L ++ MK+ I LD
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL------FQKMKEKRIRLD 514
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
VV Y+ L++G K + + A ++ DM+ K + P ++Y+ +++ KG + EA + D
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 419 EMSSKGMTPSSHIISAV 435
EM SK + P+ I +++
Sbjct: 575 EMISKNIKPTVMICNSM 591
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 149/328 (45%), Gaps = 32/328 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM S ++ E + G +D V YN + LCK + +A ++ E+ + + D
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL 483
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T LI G+C GNL +A +F +MK K + D+VTYN L G + + A + +M S
Sbjct: 484 TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 543
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
+ P ++ +++ LCS G + EA ++ + K+++ I ++M+ GYC + N ++
Sbjct: 544 KEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLE-LSNKGDIAKEESCFKLLTKLCLVGDIGK 236
E FLE + ++G + S L+ ++ K
Sbjct: 604 G-------------------------ESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 237 AMKLLETMRSLN--VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
A L++ M + P Y+ +L C + K A + + RG PD TYT M
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPD 322
IN + ++L EA + +M +RG PD
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 151/331 (45%), Gaps = 37/331 (11%)
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
S + +I L G++ +A++ R+ +S +VN + +N G + S
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSL---DSTFSNCGSNDSVFD 169
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+ Y + + +A+E F L +KG ++C L+ L +G + A + + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
V + +I+++ALC GK + + +G PD+VTY T+I++Y ++EA
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 308 LDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAAL---------------------- 340
+L M +G P V TY ++ +G ++ A +
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 341 -----DVINT--IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
DV+ T ++ DM+ ++ D+VC+S +++ ++ N + A+ F + + GL PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
V YT +I Y +KG++ A L +EM +G
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 41/215 (19%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFD----------------------------- 31
+G + ++ F++ KE + LD V YN + D
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 32 ------ALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
ALC G + +A + +E+ KNI + ++IKGYC GN D +M
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD--GVEPNSTTHKMIIEGLCSVGK 143
++GF PD ++YN L G R + A +ME + G+ P+ T+ I+ G C +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 144 VGEAEAHFNRLQDKSV----EIYSAMVNGYCEASN 174
+ EAE ++ ++ V Y+ M+NG+ N
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 707
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ +I +Y + L+EA + F ++ +G + L+ GS +++ +++++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI-GSLVRIGWVELAWGVYQEI 226
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
++ + ++V ++++N L K E + +KG+ PD VTY +IS Y KGLM
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+EA EL++ M KG +P + + V + K K +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 212/426 (49%), Gaps = 26/426 (6%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D + ++ + + C G+V +A+ + + + D+ +TLI G CL+G + +A +
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ M GF+PD VTY + +C++ + +A++ F +ME ++ + + ++I+ LC
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVG----- 192
G +A + FN ++ K ++ YS+++ G C N+ DD + +G
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC-----NDGKWDDGAKMLREMIGRNIIP 313
Query: 193 -----------YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+ K + +A EL+ E+ +G + L+ C + +A ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M S EP + YSI++++ C + LF +G P+ +TY T++ +C+
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
L A +LFQ+M RG+ P V+TY +LL G N L+ I+ M+++ ++L +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN-GELNKALEIFEKMQKSRMTLGIGI 492
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y+++I+G+ +DA LF + DKG++PD VTY MI KKG + EA L +M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 422 SKGMTP 427
G TP
Sbjct: 553 EDGCTP 558
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 195/420 (46%), Gaps = 29/420 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + +D F++ +E + V Y+IV D+LCK G DDA+ + E+ +K I D+ Y
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++LI G C G D M EM + PD+VT++ L + + A ++EM +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
G+ P++ T+ +I+G C + EA F+ + K E YS ++N YC+A
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR--- 400
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
V+ LF E+S+KG I + L+ C G + A
Sbjct: 401 ---------------------VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+L + M S V PS + Y I+LD LC G+ A +F+ T + Y +I+
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
C + + +A LF + +G+KPDV+TY V++ G K +L + ++R MK+ +
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK-GSLSEADMLFRKMKEDGCTP 558
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
D Y++LI + ++ L E+M G D T +I + + L K ++L
Sbjct: 559 DDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 192/428 (44%), Gaps = 29/428 (6%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D +D F+ +S + +N + A+ + + D + + + + I+ D+ T +
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I YC + L+ AF + G++PD +T++ L G C A+ D M
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
P+ T +I GLC G+V EA +R+ + + Y ++N C++ N+
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS----- 226
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
A +LF ++ + A ++ LC G A+ L
Sbjct: 227 -------------------ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
M ++ + YS ++ LC+ GK + +GR PDVVT++ +I+ + +
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
L EA +L+ +M RGI PD ITY L+ G F L N ++ M D+V
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDG-FCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
YS+LIN K +D +RLF ++ KGL P+ +TY ++ + + G + A EL EM
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 421 SSKGMTPS 428
S+G+ PS
Sbjct: 447 VSRGVPPS 454
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 176/374 (47%), Gaps = 29/374 (7%)
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA +F M P + +N L + V R + + + ME +G+E + T ++I
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
C K+ A + R E +S +VNG+C +SE
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR-------------VSEA 159
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
V LV++ +E+ + D+ + L+ LCL G + +A+ L++ M +P
Sbjct: 160 ----VALVDR----MVEMKQRPDLVTVST---LINGLCLKGRVSEALVLIDRMVEYGFQP 208
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
++ Y VL+ LC G + A LF R VV Y+ +I+S C+ S +AL LF
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+M+ +GIK DV+TY+ L+ G N D + R+M I DVV +S LI+ +K
Sbjct: 269 NEMEMKGIKADVVTYSSLI-GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+A L+ +MI +G+ PD +TY +I + K+ + EA+++ D M SKG P
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 432 ISAVNRSILKARKV 445
S + S KA++V
Sbjct: 388 YSILINSYCKAKRV 401
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 193/402 (48%), Gaps = 21/402 (5%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
NI+ + C+ ++ A+ ++ + I + +L+ G+C + DA YMF++M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
G+KP++V YN + G+C++ + A++ + ME DG+ P+ T+ +I GLCS G+ +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
A + + + + N +A +V E+ YE
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEG-----------------RVSEAEEFYEEM 282
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
+ S DI L+ LC+ + +A ++ M S P + YSI+++ C
Sbjct: 283 IRRSLDPDIVTYS---LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
K +H LF RG + VTYT +I YCR L A ++F+ M G+ P++ITY
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
VLL+G N + I DM++ + D+V Y+++I G+ K DA ++ +
Sbjct: 400 NVLLHGLCDNGKIEKAL-VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+GL PD TYT M+ YKKGL +EA L +M G+ P+
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 160/354 (45%), Gaps = 29/354 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + F + G + V YN + D LCK +VD+A+++ + I D+ Y +LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G DA M + M + PD+ T+N L + A ++EM ++
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGD 181
P+ T+ ++I GLC ++ EAE F + K V YS ++NGYC++
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK------- 341
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
VE +LF E+S +G + + L+ C G + A ++
Sbjct: 342 -----------------VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
M V P+ I Y+++L LC GK + A + G D+VTY +I C+
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ +A D++ + +G+ PD+ TYT ++ G +K + + ++R MK+ I
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA-DALFRKMKEDGI 497
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 181/421 (42%), Gaps = 58/421 (13%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
++ + A+ K+ K D I + E++++ I ++ L+ +C L A +M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
G +P IVT+ L G CR D A+ FD+M G +PN
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN------------------ 185
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
V IY+ +++G C++ +N +DL+ +
Sbjct: 186 -------------VVIYNTIIDGLCKSKQVDN-----------------ALDLLNR---- 211
Query: 206 FLELSNKG-DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
+E G D+ S L++ LC G A +++ M + P ++ ++DA
Sbjct: 212 -MEKDGIGPDVVTYNS---LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G+ A ++ + R PD+VTY+ +I C + L EA ++F M +G PDV+
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY++L+ G K+ + ++ +M Q + + V Y++LI G + A +F
Sbjct: 328 TYSILINGYCKSKKVEHGMK-LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRR 386
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M+ G+ P+ +TY ++ G +++A +L +M GM + + R + KA +
Sbjct: 387 MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGE 446
Query: 445 V 445
V
Sbjct: 447 V 447
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 111/227 (48%), Gaps = 1/227 (0%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C LL C + A+ L M L EPS + + +L+ C + A +FD
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
VG G+ P+VV Y T+I+ C+ + ALDL M++ GI PDV+TY L+ G +
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
D + M + EI DV ++ LI+ +K +A +E+MI + L+PD VTY+
Sbjct: 238 SDATRMV-SCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+I + EA E+ M SKG P S + K++KV+
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+ G+C + +N G D + + + K+D + +LF + + +LL
Sbjct: 33 ICGFCFSRRAYSN-GSDYREMLRNGIRFMKLD---DSLDLFFHMVQCRPLPSIADFSRLL 88
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
+ + + + L E M+ L + + +I+L+ C + A S + G
Sbjct: 89 SAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE 148
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA---ALDV 342
P +VT+ +++N +CR + + +AL +F M G KP+V+ Y ++ G K+ ALD+
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+N M++ I DVV Y+ LI+GL + + DA R+ M + + PD T+ +I
Sbjct: 209 LNR----MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALID 264
Query: 403 LYYKKGLMKEASELLDEMSSKGMTP 427
K+G + EA E +EM + + P
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDP 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 4/175 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ + ++E + D V Y+++ LC ++D+A EM + K D+ Y
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ LI GYC + +F EM +G + VTY +L G CR + VA F M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEA 172
GV PN T+ +++ GLC GK+ +A +Q D + Y+ ++ G C+A
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 223/486 (45%), Gaps = 50/486 (10%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + F + +S F V ++ + A+ K+ K D I + E+++ I ++ Y+ I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C + L A + +M G+ P IVT N L G C + A+ D+M G +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
P++ T ++ GL K EA A R+ K + Y A++NG C+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
N G ++ I G CK ++ A++LF ++ KG + L++ LC
Sbjct: 238 LNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCN 297
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV-GRGFTPDVV 289
G A +LL M N+ P + ++ ++DA GK A L+D V + PDVV
Sbjct: 298 YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVV 357
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK-------------- 335
Y T+I +C+ ++E +++F++M +RG+ + +TYT L++G F+
Sbjct: 358 AYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 336 --------------------NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
N ++ ++ M++ ++ LD+V Y+ +I L K
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
ED LF + KG++P+ VTYT M+S + +KGL +EA L EM G P+S + +
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 436 NRSILK 441
R+ L+
Sbjct: 538 IRARLR 543
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 186/422 (44%), Gaps = 55/422 (13%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V Y V + LCK G+ D A+ + ++ I+ D+ Y T+I G C ++ DAF +F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
N+M+ KG KPD+ TYN L + +C A +M + P+ +I+
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
GK+ EAE ++Y MV + + + D + + + G+CK VE+
Sbjct: 334 GKLVEAE-----------KLYDEMVK-------SKHCFPDVVAYNTLIK-GFCKYKRVEE 374
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
E+F E+S +G + + L+ D A + + M S V P + Y+I+LD
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
LC+ G + A +F+ R D+VTYTTMI + C+ +++ DLF + +G+KP
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+V+TYT ++ +G + E+A L
Sbjct: 495 NVVTYTTMM------------------------------------SGFCRKGLKEEADAL 518
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
F +M + G P+ TY +I + G ++EL+ EM S G + V +
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Query: 442 AR 443
R
Sbjct: 579 GR 580
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 1/218 (0%)
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
C + A+ +L M L PS + + +L+ CH + A +L D V G+ PD
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
VT+TT+++ + N EA+ L + M +G +PD++TY ++ G K D+ +
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP-DLALNLL 238
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
M++ +I DVV Y+ +I+GL K + +DA LF M KG++PD TY +IS
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G +AS LL +M K + P +A+ + +K K+
Sbjct: 299 GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 42/381 (11%)
Query: 74 LIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
L DA +F +M K++ F P IV ++ L + + + ++ + I+ ++M++ G+ N T+
Sbjct: 56 LDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+ I C ++ A A ++ S+ ++++NG+C + I
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-------------I 161
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
SE V LV++ E+ G + L+ L +A+ L+E M
Sbjct: 162 SEA----VALVDQMVEM-------GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
+P + Y V++ LC G+ A +L + DVV Y T+I+ C+ + +A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 309 DLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
DLF M+ +GIKPDV TY L+ YG + +A+ L DM + I+ D+V ++
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL------LSDMLEKNINPDLVFFN 324
Query: 364 VLINGLMKTDNYEDAIRLFEDMI-DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
LI+ +K +A +L+++M+ K PD V Y +I + K ++E E+ EMS
Sbjct: 325 ALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 423 KGMTPSSHIISAVNRSILKAR 443
+G+ ++ + + +AR
Sbjct: 385 RGLVGNTVTYTTLIHGFFQAR 405
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 203/412 (49%), Gaps = 29/412 (7%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V YN + +LC GK+ A+E+ + + ++ D+ YT LI+ C + A +
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+EM+++G PD+VTYNVL G+C+ AI ++M S G +PN TH +I+ +CS
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 142 GKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
G+ +AE + K SV ++ ++N C
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG------------------------ 358
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
L+ +A ++ ++ G S LL C + +A++ LE M S P + Y+
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+L ALC GK + A + + +G +P ++TY T+I+ + +A+ L +M+ +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
+KPD ITY+ L+ G +D + + ++ I + V ++ ++ GL K+ +
Sbjct: 479 DLKPDTITYSSLV-GGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDR 537
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
AI MI++G +P++ +YT +I +G+ KEA ELL+E+ +KG+ S
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 204/438 (46%), Gaps = 29/438 (6%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
S L+ V N + + G++++ + E + DI TTLI+G+C G
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A + ++ G PD++TYNV+ +G C+ E A++ D M V P+ T+ I+
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILR 212
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
LC GK+ +A +E+ M+ C Y D + T + E C+
Sbjct: 213 SLCDSGKLKQA-----------MEVLDRMLQRDC--------YPDVITYTILIEA-TCRD 252
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
V A +L E+ ++G + L+ +C G + +A+K L M S +P+ I +
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I+L ++C G+ A L + +GF+P VVT+ +IN CR L A+D+ + M +
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G +P+ ++Y LL+G K I + R M D+V Y+ ++ L K E
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER-MVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
DA+ + + KG P +TY +I K G +A +LLDEM +K + P + S++
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Query: 437 RSILKARKVQ-----FHE 449
+ + KV FHE
Sbjct: 492 GGLSREGKVDEAIKFFHE 509
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 166/337 (49%), Gaps = 23/337 (6%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E ++ G D V YN++ + +CK G++D+AI+ ++ ++ + +++ C G
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+DA + +M KGF P +VT+N+L +CR AI+ ++M G +PNS ++
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN 383
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVG 192
++ G C K+ D+++E MV+ C Y D + +
Sbjct: 384 PLLHGFCKEKKM-----------DRAIEYLERMVSRGC--------YPDIVTYNTML-TA 423
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
CK VE A E+ +LS+KG + ++ L G GKA+KLL+ MR+ +++P
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
I YS ++ L GK A F F G P+ VT+ +++ C+ A+D
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 313 DMKRRGIKPDVITYTVLLYG-SFKNAA--ALDVINTI 346
M RG KP+ +YT+L+ G +++ A AL+++N +
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++ + G + D V YN + ALCK GKV+DA+E+ +L K + Y T+I
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G G A + +EM+ K KPD +TY+ L G+ R + AI F E E G+ P
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
N+ T I+ GLC +R D++++ M+N C+ ++ S T
Sbjct: 518 NAVTFNSIMLGLCK-----------SRQTDRAIDFLVFMINRGCKP--------NETSYT 558
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEES 220
+ E G + ++A EL EL NKG + K +
Sbjct: 559 ILIE-GLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D V+ + G + YN V D L K GK AI++ +E+R K++ D Y
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++L+ G +G + +A F+E + G +P+ VT+N + G+C++ + AI+ M +
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV 159
G +PN T++ ++IEGL G EA N L +K +
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 185 bits (470), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 207/429 (48%), Gaps = 29/429 (6%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V+ F++ + G+ NIV +C + A ++ + D+ +T+L+
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
GYC + DA +F+++ GFKP++VTY L +C+N A+ F++M ++G P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDD 182
N T+ ++ GLC +G+ G+A + + +E ++A+++ + +
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVG--------- 272
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
K+ ++ Y + +++S D+ S L+ LC+ G + +A ++
Sbjct: 273 ------------KLMEAKELYNVMIQMSVYPDVFTYGS---LINGLCMYGLLDEARQMFY 317
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
M P++++Y+ ++ C + + +F +G + +TYT +I YC +
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
A ++F M R PD+ TY VLL G N + I+ M++ E+ +++V Y
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL-MIFEYMRKREMDINIVTY 436
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+++I G+ K EDA LF + KG++P+ +TYT MIS + ++GL+ EA L +M
Sbjct: 437 TIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE 496
Query: 423 KGMTPSSHI 431
G P+ +
Sbjct: 497 DGFLPNESV 505
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 164/356 (46%), Gaps = 52/356 (14%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V + + + C +++DAI + +++ ++ YTTLI+ C +L A +F
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
N+M G +P++VTYN L G+C A +M +EPN T +I+ V
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYC------EASN------NNNNYGDDKSP 185
GK+ EA+ +N + SV Y +++NG C EA N Y ++
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKG---------------------DIAKE------ 218
T + G+CK VE ++F E+S KG D+A+E
Sbjct: 332 TTLIH-GFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 219 --------ESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
+ LL LC G + KA+ + E MR ++ + + Y+I++ +C +GK +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
A LF S +G P+V+TYTTMI+ +CR + EA LF+ MK G P+ Y
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 11/232 (4%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C ++ +CL +A L M L EP + ++ +L+ CH + + A +LFD
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSF 334
+G GF P+VVTYTT+I C+ L A++LF M G +P+V+TY L+ G +
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
+AA L RDM + I +V+ ++ LI+ +K +A L+ MI + PD
Sbjct: 240 GDAAWL------LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 395 VTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
TY +I+ GL+ EA ++ M G P+ I + + K+++V+
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 9/297 (3%)
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM-VNGYCEASNNNNNYGDDKSPTPISE 190
+ I G S+ K +H +RLQ + +++ + G+C ++Y I
Sbjct: 3 RSIATGFASIVKGFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAFSSYRK------ILR 56
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
G + A +LF + + + +LL+ + + + L E M+ L +
Sbjct: 57 NGLHNLQF-NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P +IV+ +C + A + GF PD+VT+T+++N YC N +++A+ L
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIAL 175
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
F + G KP+V+TYT L+ KN L+ ++ M +VV Y+ L+ GL
Sbjct: 176 FDQILGMGFKPNVVTYTTLIRCLCKN-RHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ + DA L DM+ + +EP+ +T+T +I + K G + EA EL + M + P
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + F + +G + + V Y + CK +V+D +++ E+ K + + Y
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T LI+GYCL G A +FN+M ++ PDI TYNVL G+C N + A+ F+ M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCE 171
++ N T+ +II+G+C +GKV +A F L K +V Y+ M++G+C
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YN++ D LC GKV+ A+ + E +R + +D++I YT +I+G C G + DAF +F +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+KG KP+++TY + +G CR A + F +M+ DG PN + +K
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/450 (27%), Positives = 227/450 (50%), Gaps = 16/450 (3%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V+D K+ + +G+ + NI+ + C+ K A + ++ + D + TLIK
Sbjct: 107 VLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIK 166
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G L+G + +A + + M G +PD+VTYN + G+CR+ + +A++ +ME V+
Sbjct: 167 GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKA 226
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNN---Y 179
+ T+ II+ LC G + A + F ++ K SV Y+++V G C+A N+
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 180 GDDKSPTPISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
D S + V + K +++A EL+ E+ +G + L+ C+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
+ +A +L+ M P + ++ ++ C V + +F + RG + VTY
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+ ++ +C+ +K A +LFQ+M G+ PDV+TY +LL G N L+ I+ D++
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN-GKLEKALEIFEDLQ 465
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
++++ L +V Y+ +I G+ K EDA LF + KG++P+ +TYT MIS KKG +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 412 EASELLDEMSSKGMTPSSHIISAVNRSILK 441
EA+ LL +M G P+ + + R+ L+
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 211/458 (46%), Gaps = 51/458 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ V E+G D V YN + + +C+ G A+++ ++ +N+ D+ Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+T+I C G + A +F EM+ KG K +VTYN L G+C+ + +M S
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC------E 171
+ PN T ++++ GK+ EA + + + + Y+ +++GYC E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 172 ASNNNNNYGDDK-SPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
A+N + +K SP ++ GYC V V+ ++F +S +G +A
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA---------- 401
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
+ + YSI++ C GK K A LF V G P
Sbjct: 402 -------------------------NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
DV+TY +++ C L++AL++F+D+++ + ++ YT ++ G K D N +
Sbjct: 437 DVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN-L 495
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ + + +V+ Y+V+I+GL K + +A L M + G P+ TY +I + +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
G + +++L++EM S G + + I V +L A K
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 204/445 (45%), Gaps = 29/445 (6%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + F+E S V ++ F A+ + + + ++ ++L + I +I +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C A+ + ++ G++PD T+N L G+ + A+ D M +G +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD 181
P+ T+ I+ G+C G A ++++++V+ YS +++ C
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG-------- 242
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
++ A LF E+ KG + + L+ LC G LL
Sbjct: 243 ----------------CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M S + P+ I ++++LD GK + A L+ + RG +P+++TY T+++ YC
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
N L EA ++ M R PD++T+T L+ G + +D ++R++ + + + V
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKG-YCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
YS+L+ G ++ + A LF++M+ G+ PD +TY ++ G +++A E+ +++
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 422 SKGMTPSSHIISAVNRSILKARKVQ 446
M + + + + K KV+
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVE 490
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 178/415 (42%), Gaps = 62/415 (14%)
Query: 38 KVDDAIEMREEL-RVKNID--LDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIV 94
K DDAI + +E+ R + + +D + + I Q NL+ F +++ G +I
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAI-ARTKQFNLVLDFC--KQLELNGIAHNIY 124
Query: 95 TYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL 154
T N++ CR + A + ++ G EP++TT +I+GL GKV EA L
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV----L 180
Query: 155 QDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGD 214
D+ VE NG C+ D+V Y
Sbjct: 181 VDRMVE------NG-------------------------CQPDVV--TYN---------- 197
Query: 215 IAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARS 274
++ +C GD A+ LL M NV+ YS ++D+LC G A S
Sbjct: 198 --------SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 275 LFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF 334
LF +G VVTY +++ C+ + L +DM R I P+VIT+ VLL F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL-DVF 308
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
L N ++++M IS +++ Y+ L++G + +A + + M+ PD
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 395 VTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
VT+T +I Y + + ++ +S +G+ ++ S + + ++ K++ E
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 213/456 (46%), Gaps = 16/456 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ VD F E +S F V ++ + A+ K+ K D I E++ + + ++ Y +I
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
C + L A + +M G+ P IVT N L G C + A+ D+M G +
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
P++ T ++ GL K EA A R+ K + Y A++NG C+
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
N G ++ I CK V+ A LF E+ NKG + L++ LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + ++ ++DA GK A LFD + R P++VT
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y ++IN +C + L EA +F M + PDV+TY L+ G K +D + ++RDM
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME-LFRDM 406
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+ + + V Y+ LI+G + + ++A +F+ M+ G+ P+ +TY ++ K G +
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
++A + + + M P + + ++ + KA KV+
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVE 502
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 181/416 (43%), Gaps = 51/416 (12%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V Y V + LCK G+ D A+ + ++ I+ D+ Y+T+I C ++ DA +F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
EM NKG +PD+ TY+ L + +C A +M + PN T +I+
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISE 190
GK+ EAE F+ + +S++ Y++++NG+C + D P ++
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 191 ----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
G+CK V ELF ++S +G + + L+ D A + + M S
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
V P+ + Y+ +LD LC GK + A +F+ PD+ TY M C+ +++
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
DLF + +G+KPDVI Y+ +I
Sbjct: 504 GWDLFCSLSLKGVKPDVIA------------------------------------YNTMI 527
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+G K E+A LF M + G PD TY +I + + G ++EL+ EM S
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 199/437 (45%), Gaps = 21/437 (4%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ V + E G D V + + L + K +A+ + E + VK D+ Y +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G C +G A + N+M+ + D+V Y+ + +C+ A+N F EM++ G+
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
P+ T+ +I LC+ G+ +A + + ++ + N +A
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG------- 324
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
K+ EK ++ ++ S +I S L+ C+ + +A ++ M
Sbjct: 325 ----------KLIEAEKLFDEMIQRSIDPNIVTYNS---LINGFCMHDRLDEAQQIFTLM 371
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
S + P + Y+ +++ C K LF RG + VTYTT+I+ + + +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
A +F+ M G+ P+++TY LL G KN L+ ++ ++++++ D+ Y++
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN-GKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
+ G+ K ED LF + KG++PD + Y MIS + KKGL +EA L +M G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 425 MTPSSHIISAVNRSILK 441
P S + + R+ L+
Sbjct: 551 PLPDSGTYNTLIRAHLR 567
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 178/389 (45%), Gaps = 18/389 (4%)
Query: 70 LQGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
L L +A +F EM K++ F P IV ++ L + + + + + I+ ++ME GV N
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNL 100
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNN------- 177
T+ ++I LC ++ A A ++ S+ ++++NG+C + +
Sbjct: 101 YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 160
Query: 178 ----NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
Y D G + + +A L + KG + ++ LC G+
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
A+ LL M +E ++YS V+D+LC A +LF +G PDV TY++
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I+ C +A L DM R I P+V+T+ L+ +F L ++ +M Q
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI-DAFAKEGKLIEAEKLFDEMIQR 339
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
I ++V Y+ LING D ++A ++F M+ K PD VTY +I+ + K + +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 414 SELLDEMSSKGMTPSSHIISAVNRSILKA 442
EL +MS +G+ ++ + + +A
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQA 428
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 17/340 (5%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D ++ F E G+ D Y+ + LC G+ DA + ++ + I+ ++ + +LI
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+ +G LI+A +F+EM + P+IVTYN L G C +D A F M S
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN--- 178
P+ T+ +I G C KV + F + + + Y+ +++G+ +AS+ +N
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 179 ----YGDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LC 229
D P ++ G CK +EKA +F E K + + + ++++ +C
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMC 496
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
G + L ++ V+P I Y+ ++ C G + A +LF G PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
TY T+I ++ R + +L ++M+ D TY ++
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ ++S M D YNI+ + +CK GKV+D ++ L +K + D+ Y T+I G+C
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G +A+ +F +MK G PD TYN L R+ + + EM S +++T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 131 HKMIIEGL 138
+ ++ + L
Sbjct: 593 YGLVTDML 600
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 215/468 (45%), Gaps = 64/468 (13%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D +D F + +S F V +N + A+ KL K D I + +++ V I D+ + +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I +C + A + +M G++PD VT L G CR + A++ D+M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
+P+ + II+ LC +V +A F ++ K + Y+A+VNG C N++ +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC----NSSRWS 242
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
D A L ++ K + LL G + +A +L
Sbjct: 243 D--------------------AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E M ++++P + YS +++ LC + A +FD V +G DVV+Y T+IN +C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 301 MNSLKEALDLFQDMKRR-----------------------------------GIKPDVIT 325
+++ + LF++M +R GI PD+ T
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
Y +LL G N L+ I+ DM++ E+ LD+V Y+ +I G+ KT E+A LF +
Sbjct: 403 YNILLGGLCDN-GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIIS 433
KGL+PD VTYT M+S KGL+ E L +M +G+ + +S
Sbjct: 462 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 190/419 (45%), Gaps = 48/419 (11%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD V + E G D VAYN + D+LCK +V+DA + +E+ K I ++ YT L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C DA + ++M K P+++TY+ L +N + A F+EM +
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYG 180
+P+ T+ +I GLC ++ EA F+ + K V Y+ ++NG+C+A
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR------ 345
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
VE +LF E+S +G ++ + L+ GD+ KA +
Sbjct: 346 ------------------VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
M + P Y+I+L LC G+ + A +F+ R D+VTYTT+I C+
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
++EA LF + +G+KPD++TYT ++ G L + ++ MKQ
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG-LCTKGLLHEVEALYTKMKQ-------- 498
Query: 361 CYSVLINGLMKTD-NYEDA-IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
GLMK D D I L ++I K L Y + K G+ K+A LL
Sbjct: 499 ------EGLMKNDCTLSDGDITLSAELIKKMLS---CGYAPSLLKDIKSGVCKKALSLL 548
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 176/391 (45%), Gaps = 26/391 (6%)
Query: 76 DAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
DA +F++M K++ F P IV +N L + + + + V I+ +ME G+ + T ++
Sbjct: 68 DAIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT-PIS 189
I C +V A + ++ E ++VNG+C N D S +
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR----RNRVSDAVSLVDKMV 182
Query: 190 EVGY--------------CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
E+GY CK V A++ F E+ KG + L+ LC
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A +LL M + P+ I YS +LDA GK A+ LF+ V PD+VTY+++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N C + + EA +F M +G DV++Y L+ G F A ++ ++R+M Q +
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING-FCKAKRVEDGMKLFREMSQRGL 361
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ V Y+ LI G + + + A F M G+ PD TY ++ G +++A
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+ ++M + M + V R + K KV+
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 208/429 (48%), Gaps = 22/429 (5%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ D + V + G +D A+ +RE++ ++ G+C +G + DA
Sbjct: 219 GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA 278
Query: 78 FYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
EM N+ GF PD T+N L G+C+ + AI D M +G +P+ T+ +I
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
GLC +G+V EA VE+ M+ C S N Y T IS + CK
Sbjct: 339 GLCKLGEVKEA-----------VEVLDQMITRDC--SPNTVTYN-----TLISTL--CKE 378
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
+ VE+A EL L++KG + + L+ LCL + AM+L E MRS EP + Y
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++++D+LC GK A ++ G V+TY T+I+ +C+ N +EA ++F +M+
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G+ + +TY L+ G K+ D + + + + + D Y+ L+ + + +
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIK 557
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
A + + M G EPD VTY +IS K G ++ AS+LL + KG+ + H + V
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 437 RSILKARKV 445
+ + + RK
Sbjct: 618 QGLFRKRKT 626
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 204/458 (44%), Gaps = 67/458 (14%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKN-IDLDIKHYTTLIKGYCL 70
++ E G V+ N++ CK G+V+DA+ +E+ ++ D + TL+ G C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ A + + M +G+ PD+ TYN + +G+C+ E + A+ D+M + PN+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +I LC +V EA L K V +++++ G C N+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH----------- 416
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
A ELF E+ +KG E + L+ LC G + +A+ +L+ M
Sbjct: 417 -------------RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLF------------------------------ 276
S I Y+ ++D C KT+ A +F
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 277 -----DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY 331
D + G PD TY +++ +CR +K+A D+ Q M G +PD++TY L+
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 332 GSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG-L 390
G K A ++V + + R ++ I+L Y+ +I GL + +AI LF +M+++
Sbjct: 584 GLCK-AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 391 EPDKVTYTDMI-SLYYKKGLMKEASELLDEMSSKGMTP 427
PD V+Y + L G ++EA + L E+ KG P
Sbjct: 643 PPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 29/377 (7%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D YN V LCKLG+V +A+E+ +++ ++ + Y TLI C + + +A +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ +KG PD+ T+N L G+C RVA+ F+EM S G EP+ T+ M+I+ LCS
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 142 GKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
GK+ EA +++ +SV Y+ +++G+C+A+
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT---------------------- 486
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+A E+F E+ G + L+ LC + A +L++ M +P + Y+
Sbjct: 487 --REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+L C G K A + + G PD+VTY T+I+ C+ ++ A L + ++ +
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN-YE 376
GI Y ++ G F+ + IN ++Q E D V Y ++ GL
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR 664
Query: 377 DAIRLFEDMIDKGLEPD 393
+A+ ++++KG P+
Sbjct: 665 EAVDFLVELLEKGFVPE 681
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 194/418 (46%), Gaps = 23/418 (5%)
Query: 48 ELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRND 107
++ V I D+ + LIK C L A M +M + G PD T+ + G
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 108 EARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE------- 160
+ A+ ++M G ++ + +I+ G C G+V +A N +Q+ S +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDA---LNFIQEMSNQDGFFPDQ 295
Query: 161 -IYSAMVNGYCEASNNNN---------NYGDDKSPTPISEV--GYCKVDLVEKAYELFLE 208
++ +VNG C+A + + G D + V G CK+ V++A E+ +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 209 LSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK 268
+ + + L++ LC + +A +L + S + P ++ ++ LC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTV 328
+ A LF+ +G PD TY +I+S C L EAL++ + M+ G VITY
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 329 LLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK 388
L+ G F A I+ +M+ +S + V Y+ LI+GL K+ EDA +L + MI +
Sbjct: 476 LIDG-FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 389 GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
G +PDK TY +++ + + G +K+A++++ M+S G P + + KA +V+
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 160/379 (42%), Gaps = 60/379 (15%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E + G D YN++ D+LC GK+D+A+ M +++ + + Y TLI G+C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+A +F+EM+ G + VTYN L G+C++ A D+M +G +P+ T
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 542
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ ++ C G + K+ +I AM + CE + YG T IS
Sbjct: 543 YNSLLTHFCRGGDI-----------KKAADIVQAMTSNGCEP--DIVTYG-----TLIS- 583
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
G CK VE A +L + KG +N+
Sbjct: 584 -GLCKAGRVEVASKLLRSIQMKG---------------------------------INLT 609
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG-FTPDVVTYTTMINSYCR-MNSLKEAL 308
P Y+ V+ L KT A +LF + + PD V+Y + C ++EA+
Sbjct: 610 PHA--YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
D ++ +G P+ + +L G + ++ + M++ S + V ++ G
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS---MVKG 724
Query: 369 LMKTDNYEDAIRLFEDMID 387
L+K ++DA+ ++D
Sbjct: 725 LLKIRKFQDALATLGGVLD 743
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 235 GKAMKLLET----MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G ++KL+E M ++P +++++ ALC + + A + + G PD T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+TT++ Y L AL + + M G ++ V+++G K D +N I
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
Q D ++ L+NGL K + + AI + + M+ +G +PD TY +IS K G +
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
KEA E+LD+M ++ +P++ + + ++ K +V+
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ ++ K+ + SG + YN + D CK K +A E+ +E+ V + + Y TLI
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C + DA + ++M +G KPD TYN L CR + + A + M S+G E
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNG 168
P+ T+ +I GLC G+V A +Q K + + Y+ ++ G
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 197/411 (47%), Gaps = 16/411 (3%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D Y V + LCK G +D A+ + +++ I+ D+ YTT+I C N+ DA +F
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
EM NKG +P++VTYN L +C A +M + PN T +I+
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISE 190
GK+ EAE ++ + +S++ YS+++NG+C + D P ++
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 191 ----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
G+CK VE+ ELF E+S +G + + L+ L GD A K+ + M S
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
V P I YSI+LD LC GK + A +F+ PD+ TY MI C+ +++
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
DLF + +G+KP+VI YT ++ G F + + ++R+MK+ + Y+ LI
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISG-FCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
++ + + L ++M G D T + +I++ + L K E+L
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 211/456 (46%), Gaps = 16/456 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D VD F E +S V +N + A+ K+ K D I + E ++ I D+ Y LI
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C + L A + +M G++PDIVT + L G C A+ D+M +
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
PN+ T +I GL K EA A +R+ + + Y +VNG C+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
G ++ I C V A LF E+ NKG + L+ LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + +S ++DA GK A L+D + R PD+ T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y+++IN +C + L EA +F+ M + P+V+TY L+ G F A ++ ++R+M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG-FCKAKRVEEGMELFREM 421
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
Q + + V Y+ LI GL + + + A ++F+ M+ G+ PD +TY+ ++ K G +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
++A + + + M P + + + + KA KV+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 175/372 (47%), Gaps = 35/372 (9%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D ++ F E G+ + V YN + LC G+ DA + ++ + I+ ++ ++ L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I + +G L++A +++EM + PDI TY+ L G C +D A + F+ M S
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
PN T+ +I+G C +V E F + + + Y+ ++ G +A
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA-------- 443
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
G C D+ +K ++ + DI LL LC G + KA+ +
Sbjct: 444 -----------GDC--DMAQKIFKKMVSDGVPPDIITYSI---LLDGLCKYGKLEKALVV 487
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E ++ +EP Y+I+++ +C GK + LF S +G P+V+ YTTMI+ +CR
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISL 357
+EA LF++MK G P+ TY L+ ++ AA+ ++I ++M+
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELI----KEMRSCGFVG 603
Query: 358 DVVCYSVLINGL 369
D S++IN L
Sbjct: 604 DASTISMVINML 615
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 34/281 (12%)
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
++ A +LF E+ + KLL+ + + + L E M++L + Y+I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+++ C + A ++ + G+ PD+VT ++++N YC + EA+ L M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 319 IKPDVITYTVLLYGSFKNAAA----------------------------------LDVIN 344
+P+ +T+ L++G F + A +D+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++ + M++ +I DVV Y+ +I+ L N DA+ LF +M +KG+ P+ VTY +I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G +AS LL +M + + P+ SA+ + +K K+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 4 DSDVVDK-FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
D D+ K FK+ G+ D + Y+I+ D LCK GK++ A+ + E L+ ++ DI Y
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+I+G C G + D + +F + KG KP+++ Y + +G CR A F EM+ D
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 123 GVEPNSTTHKMIIEGLCSVG-KVGEAE 148
G PNS T+ +I G K AE
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAE 591
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 216/464 (46%), Gaps = 29/464 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + + G + V YN + D CKL K+DD ++ + +K ++ ++ Y +I G C
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G + + ++ EM +G+ D VTYN L G C+ A+ EM G+ P+ T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNY------- 179
+ +I +C G + A ++++ + + Y+ +V+G+ + N Y
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 180 GDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
+ SP+ ++ G+C +E A + ++ KG S +L+ C D+
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A+++ M ++P I YS ++ C +TK A L++ + G PD TYT +I
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N+YC L++AL L +M +G+ PDV+TY+VL+ G K + + + + + +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 356 SLDVVCYSV--------------LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
DV +++ LI G +A ++FE M+ K +PD Y MI
Sbjct: 588 PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ + G +++A L EM G + + A+ +++ K KV
Sbjct: 648 HGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 206/448 (45%), Gaps = 33/448 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FKE ES + + YNI+ C G +D A+ + +++ K ++ Y TLI GYC
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ D F + M KG +P++++YNV+ G+CR + EM G + T
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 131 HKMIIEGLCSVGKVGEAEA-HFNRLQD---KSVEIYSAMVNGYCEASNNNNNY------- 179
+ +I+G C G +A H L+ SV Y+++++ C+A N N
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 180 -----GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
++++ T + + G+ + + +AY + E+++ G + L+ C+ G +
Sbjct: 373 VRGLCPNERTYTTLVD-GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
A+ +LE M+ + P + YS VL C A + V +G PD +TY+++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
I +C KEA DL+++M R G+ PD TYT L+ ++ L+ + +M +
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI-NAYCMEGDLEKALQLHNEMVEKG 550
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY---------------TD 399
+ DVV YSVLINGL K +A RL + + P VTY
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTP 427
+I + KG+M EA ++ + M K P
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKP 638
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 207/449 (46%), Gaps = 44/449 (9%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKN---IDLDIKHYTT 63
++ KFK +K + + + VA + D L V +++ +L DL +K Y+
Sbjct: 89 ILTKFKLYKTAQILAEDVAAKTLDDEYASL--VFKSLQETYDLCYSTSSVFDLVVKSYSR 146
Query: 64 LIKGYCLQGNLID-AFYMFNEMKNKGFKPDIVTYN-VLAAGVCRNDEARVAINNFDEMES 121
L +LID A + + + GF P +++YN VL A + A N F EM
Sbjct: 147 L--------SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE 198
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNN 177
V PN T+ ++I G C G + A F++++ K +V Y+ +++GY
Sbjct: 199 SQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGY-------- 250
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
CK+ ++ ++L ++ KG S ++ LC G + +
Sbjct: 251 ----------------CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+L M ++ Y+ ++ C G A + + G TP V+TYT++I+S
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
C+ ++ A++ M+ RG+ P+ TYT L+ G F ++ + R+M S
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVLREMNDNGFSP 413
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
VV Y+ LING T EDAI + EDM +KGL PD V+Y+ ++S + + + EA +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 418 DEMSSKGMTPSSHIISAVNRSILKARKVQ 446
EM KG+ P + S++ + + R+ +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 182/415 (43%), Gaps = 33/415 (7%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E G+ + Y + ++CK G ++ A+E +++RV+ + + + YTTL+ G+ +G
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ +A+ + EM + GF P +VTYN L G C + AI ++M+ G+ P+ ++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY--------- 179
++ G C V EA + +K ++ YS+++ G+CE
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 180 ---GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
D+ + T + YC +EKA +L E+ KG + + L+ L +
Sbjct: 515 GLPPDEFTYTALIN-AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLD---------------ALCHVGKTKHARSLFDSFVG 281
A +LL + PS + Y +++ C G A +F+S +G
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 282 RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD 341
+ PD Y MI+ +CR +++A L+++M + G +T L+ K +
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVT 396
+ + I ++ E+S + VL+ + N + + + +M G P+ ++
Sbjct: 694 LNSVIVHVLRSCELS-EAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 40/296 (13%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D + ++ KE G+ D V+Y+ V C+ VD+A+ ++ E+ K I D Y
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++LI+G+C Q +A ++ EM G PD TY L C + A+ +EM
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
GV P+ T+ ++I GL + EA+ +L + +
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL------------------------FYE 584
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+ P+ ++ Y +E N +I + +S L+ C+ G + +A ++
Sbjct: 585 ESVPSDVT-------------YHTLIE--NCSNI-EFKSVVSLIKGFCMKGMMTEADQVF 628
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
E+M N +P Y+I++ C G + A +L+ V GF VT ++ +
Sbjct: 629 ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 217/458 (47%), Gaps = 20/458 (4%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT--T 63
D V F E +S F + ++ + A+ K+ K D I + E++ +N+ + HYT
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM--QNLGIPHNHYTYSI 121
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
LI +C + L A + +M G++P+IVT + L G C + A+ D+M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN----- 174
+PN+ T +I GL K EA A +R+ K + Y +VNG C+ +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 175 ---NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL 228
N G + I G CK ++ A LF E+ KG + L++ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 229 CLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV 288
C G A +LL M + P +S ++DA GK A L+D V R P +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
VTY+++IN +C + L EA +F+ M + PDV+TY L+ G F ++ ++R
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG-FCKYKRVEEGMEVFR 420
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+M Q + + V Y++LI GL + + + A +F++M+ G+ P+ +TY ++ K G
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+++A + + + M P+ + + + + KA KV+
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 190/391 (48%), Gaps = 18/391 (4%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V Y +V + LCK G D A + ++ ++ + Y T+I G C ++ DA +F
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
EM+ KG +P++VTY+ L + +C A +M + P+ T +I+
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 142 GKVGEAEAHFN----RLQDKSVEIYSAMVNGYC------EASN------NNNNYGDDKSP 185
GK+ EAE ++ R D S+ YS+++NG+C EA + + + D +
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+ + G+CK VE+ E+F E+S +G + + L+ L GD A ++ + M
Sbjct: 400 NTLIK-GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S V P+ + Y+ +LD LC GK + A +F+ P + TY MI C+ ++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
+ DLF ++ +G+KPDV+ Y ++ G F + + + ++++MK+ + CY+ L
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVT 396
I ++ + E + L ++M G D T
Sbjct: 578 IRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 30/232 (12%)
Query: 20 FLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFY 79
F D V YN + CK +V++ +E+ E+ + + + Y LI+G G+ A
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+F EM + G P+I+TYN L G+C+N + A+ F+ ++ +EP T+ ++IEG+C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 140 SVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
GKV + F L K V+ Y+ M++G+C +
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK-------------------- 552
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDIGKAMKLLETMRS 246
E+A LF E+ G + C+ L + L GD + +L++ MRS
Sbjct: 553 ----EEADALFKEMKEDGTLP-NSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FKE G+ + + YN + D LCK GK++ A+ + E L+ ++ I Y +I+G C
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + D + +F + KG KPD+V YN + +G CR A F EM+ DG PNS
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 131 HKMIIEG 137
+ +I
Sbjct: 574 YNTLIRA 580
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 73/146 (50%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E + G+ + V YNI+ L + G D A E+ +E+ + +I Y TL+ G C
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L A +F ++ +P I TYN++ G+C+ + + F + GV+P+
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD 156
+ +I G C G EA+A F +++
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKE 564
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ + S M YNI+ + +CK GKV+D ++ L +K + D+ Y T+I G+C
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G+ +A +F EMK G P+ YN L R+ + + EM S G +++T
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Query: 131 HKMI 134
++
Sbjct: 609 IGLV 612
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT 327
K A +LF V P ++ ++ ++++ +MN + L + M+ GI + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 328 VLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+L+ F + L + + M + ++V S L+NG + +A+ L + M
Sbjct: 121 ILI-NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
G +P+ VT+ +I + EA L+D M +KG P
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 219
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 209/418 (50%), Gaps = 19/418 (4%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N++ + C+ + A ++ + DI +T+LI G+CL + +A M N+M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
G KPD+V Y + +C+N A++ FD+ME+ G+ P+ + ++ GLC+ G+ +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK-----------SPTPISEV---- 191
A++ + + ++ N +A + D + +P +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
G+C V++A ++F + KG + L+ C + AMK+ M +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ I Y+ ++ VGK A+ +F V RG P++ TY +++ C +K+AL +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 312 QDMKRR---GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+DM++R G+ P++ TY VLL+G N L+ ++ DM++ E+ + ++ Y+++I G
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYN-GKLEKALMVFEDMRKREMDIGIITYTIIIQG 469
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+ K ++A+ LF + KG++P+ VTYT MIS +++GL EA L +M G++
Sbjct: 470 MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 183/382 (47%), Gaps = 32/382 (8%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
E G+ D V Y + D+LCK G V+ A+ + +++ I D+ YT+L+ G C G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA + M + KPD++T+N L + + A ++EM + PN T+ +I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 136 EGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
G C G V EA F ++ K V Y++++NG+C+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK-------------------- 329
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
CK V+ A ++F E+S KG + L+ VG A ++ M S V P
Sbjct: 330 --CKK--VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGR---GFTPDVVTYTTMINSYCRMNSLKEAL 308
+ Y+++L LC+ GK K A +F+ R G P++ TY +++ C L++AL
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+F+DM++R + +ITYT+++ G K + +N ++ + + +VV Y+ +I+G
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN-LFCSLPSKGVKPNVVTYTTMISG 504
Query: 369 LMKTDNYEDAIRLFEDMIDKGL 390
L + +A LF M + G+
Sbjct: 505 LFREGLKHEAHVLFRKMKEDGV 526
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 1/226 (0%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C L+ C A L M L EP + ++ +++ C + + A S+ +
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
V G PDVV YTT+I+S C+ + AL LF M+ GI+PDV+ YT L+ G +
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
D +++ R M + +I DV+ ++ LI+ +K + DA L+ +MI + P+ TYT
Sbjct: 229 RDA-DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+I+ + +G + EA ++ M +KG P +++ K +KV
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 1/206 (0%)
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
KLL + + + L + ++ + V +++++ C + A S +
Sbjct: 77 KLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL 136
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
GF PD+VT+T++IN +C N ++EA+ + M GIKPDV+ YT ++ KN ++
Sbjct: 137 GFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN-GHVNY 195
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+++ M+ I DVV Y+ L+NGL + + DA L M + ++PD +T+ +I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPS 428
+ K+G +A EL +EM + P+
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPN 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 267 GKTKHARSLFD-SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
GK L D SF R F Y ++ + EALDLF M P +I
Sbjct: 19 GKALSFSRLLDLSFWVRAFC----NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
+T LL DV+ + ++ +S D+ ++L+N ++ A M
Sbjct: 75 FTKLL-NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM 133
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ G EPD VT+T +I+ + M+EA ++++M G+ P + + + S+ K V
Sbjct: 134 MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHV 193
Query: 446 QF 447
+
Sbjct: 194 NY 195
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 199/412 (48%), Gaps = 29/412 (7%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ D ++ I+ C+ ++ A+ + ++ + I + +L+ G+CL + DA
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F + M G++P++V YN L G+C+N E +A+ +EME G+ + T+ ++ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 138 LCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY 193
LC G+ +A + +S+ ++A+++ + + N
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN------------------- 261
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
+++A EL+ E+ + ++ LC+ G + A K + M S P+
Sbjct: 262 -----LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+ Y+ ++ C LF GF D+ TY T+I+ YC++ L+ ALD+F
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M R + PD+IT+ +LL+G N + + DM+++E + +V Y+++I+GL K D
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESAL-VKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
E A LF + +G++PD TYT MI K G +EA EL+ M +G+
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 162/344 (47%), Gaps = 29/344 (8%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+SG + V YN + D LCK G+++ A+E+ E+ K + D+ Y TL+ G C G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA M +M + PD+VT+ L + A + EM V+PN+ T+ II
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 136 EGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
GLC G++ +A+ F+ + K +V Y+ +++
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLIS------------------------ 324
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
G+CK +V++ +LF +S +G A + L+ C VG + A+ + M S V P
Sbjct: 325 GFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
I + I+L LC G+ + A FD +V Y MI+ C+ + +++A +LF
Sbjct: 385 DIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ G+KPD TYT+++ G KN + + + R MK+ I
Sbjct: 445 CRLPVEGVKPDARTYTIMILGLCKNGPRREA-DELIRRMKEEGI 487
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 141/316 (44%), Gaps = 28/316 (8%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++ E ++ G+ D V YN + LC G+ DA M ++ ++I+ D+ +T LI
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
+ QGNL +A ++ EM P+ VTYN + G+C + A FD M S G PN
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDK 183
T+ +I G C V E F R+ + + Y+ +++GYC
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYC------------- 362
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+VG +V A ++F + ++ + LL LC+ G+I A+ +
Sbjct: 363 ------QVGKLRV-----ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
MR + Y+I++ LC K + A LF G PD TYT MI C+
Sbjct: 412 MRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGP 471
Query: 304 LKEALDLFQDMKRRGI 319
+EA +L + MK GI
Sbjct: 472 RREADELIRRMKEEGI 487
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 5/232 (2%)
Query: 201 KAYELFLELSNKGD---IAKEESCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
+ YE + S K + I+ + F +L C + A+ +L M L EPS + +
Sbjct: 85 RRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTF 144
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+L C V + A SL V G+ P+VV Y T+I+ C+ L AL+L +M++
Sbjct: 145 GSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEK 204
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
+G+ DV+TY LL G + D + RDM + I+ DVV ++ LI+ +K N +
Sbjct: 205 KGLGADVVTYNTLLTGLCYSGRWSDAARML-RDMMKRSINPDVVTFTALIDVFVKQGNLD 263
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+A L+++MI ++P+ VTY +I+ G + +A + D M+SKG P+
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 117/233 (50%), Gaps = 7/233 (3%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
E A+ LF E+ + + +LLT + + + M + ++I+
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ C + A S+ + G+ P +VT+ ++++ +C +N + +A L M + G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 320 KPDVITYTVLLYGSFKNA---AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
+P+V+ Y L+ G KN AL+++N +M++ + DVV Y+ L+ GL + +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLN----EMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
DA R+ DM+ + + PD VT+T +I ++ K+G + EA EL EM + P++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 159/356 (44%), Gaps = 29/356 (8%)
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DAF +F EM + P IV + L I +ME G+ + + ++I
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 136 EGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
C ++ A + ++ + S+ + ++++G+C N GD S
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV----NRIGDAFSLV----- 164
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
+ +V+ YE + + N L+ LC G++ A++LL M +
Sbjct: 165 ----ILMVKSGYEPNVVVYNT-----------LIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ Y+ +L LC+ G+ A + + R PDVVT+T +I+ + + +L EA +L+
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELY 269
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
++M + + P+ +TY ++ G + D T + M +VV Y+ LI+G K
Sbjct: 270 KEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT-FDLMASKGCFPNVVTYNTLISGFCK 328
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
++ ++LF+ M +G D TY +I Y + G ++ A ++ M S+ +TP
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTP 384
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D F G F + V YN + CK VD+ +++ + + + + DI Y TLI
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
GYC G L A +F M ++ PDI+T+ +L G+C N E A+ FD+M
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCE 171
+ ++I GLC KV +A F RL + V+ Y+ M+ G C+
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 218/456 (47%), Gaps = 16/456 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D VD F + +S F V +N + A+ K+ K + I + E+++ I D+ Y+ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C + L A + +M G++PDIVT + L G C + A+ D+M G +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
P++ T +I GL K EA A +++ + + Y +VNG C+ +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
G ++ I G CK ++ A LF E+ NKG + L++ LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + +S ++DA GK A L+D + R PD+ T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y+++IN +C + L EA +F+ M + P+V+TY+ L+ G F A ++ ++R+M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG-FCKAKRVEEGMELFREM 424
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
Q + + V Y+ LI+G + + ++A +F+ M+ G+ P+ +TY ++ K G +
Sbjct: 425 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+A + + + M P + + + + KA KV+
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 199/454 (43%), Gaps = 51/454 (11%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ V + + G D V Y V + LCK G +D A+ + +++ I+ D+ Y T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G C ++ DA +F EM NKG +PD+ TY+ L + +C A +M +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-- 178
PN T +I+ GK+ EAE ++ + +S++ YS+++NG+C +
Sbjct: 325 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 384
Query: 179 -----YGDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
D P ++ G+CK VE+ ELF E+S +G + + L+
Sbjct: 385 MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
D A + + M S+ V P+ + Y+I+LD LC GK A +F+ PD+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
TY MI C+ +++ +LF ++ +G+ P+VI
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA------------------------ 540
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
Y+ +I+G + + E+A L + M + G P+ TY +I + G
Sbjct: 541 ------------YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 410 MKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
+ ++EL+ EM S G + I V + R
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGR 622
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
I+ + L + K A LF V P +V + ++++ +MN + + L + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
GI D+ TY++ + F + L + + M + D+V S L+NG + D
Sbjct: 113 GISHDLYTYSIFI-NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
A+ L + M++ G +PD T+T +I + EA L+D+M +G P
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 198/400 (49%), Gaps = 32/400 (8%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+DV +KE + + +N+V +ALCK GK++ A ++ E+++V ++ Y TL
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTL 264
Query: 65 IKGYC-LQGN--LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
I GYC L GN + A + EM P++ T+N+L G ++D ++ F EM
Sbjct: 265 IDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
V+PN ++ +I GLC+ GK+ EA + +++ V+ Y+A++NG+C
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC------- 377
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
K D++++A ++F + +G + L+ C +G I
Sbjct: 378 -----------------KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
L E M + P Y+ ++ LC G + A+ LFD +G PD+VT+ ++
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEG 479
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
YCR ++A L ++M + G+KP +TY +++ G K N + K+ + +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM 539
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
+V Y+VL+ G + EDA L +M++KGL P+++TY
Sbjct: 540 NVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 197/421 (46%), Gaps = 37/421 (8%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
K + + FLDG N + ++ + AI M + + V +I D+ L+ Y
Sbjct: 115 KRYSKIRSFLDGFVRN---GSDHQVHSIFHAISMCDNVCVNSIIADM-----LVLAYANN 166
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
F F G+K ++ L + + + + + EM ++PN T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
++I LC GK+ +A ++ +V Y+ +++GYC+ N Y
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-------- 278
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD-IGKAMKLLETMRS 246
K D V K E+ + D++ + F +L D + +MK+ + M
Sbjct: 279 -------KADAVLK--EMV-----ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD 324
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+V+P+ I Y+ +++ LC+ GK A S+ D V G P+++TY +IN +C+ + LKE
Sbjct: 325 QDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKE 384
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
ALD+F +K +G P Y +L+ ++ +D + +M++ I DV Y+ LI
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLI-DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
GL + N E A +LF+ + KGL PD VT+ ++ Y +KG ++A+ LL EMS G+
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 427 P 427
P
Sbjct: 503 P 503
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 155/324 (47%), Gaps = 30/324 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
KE E+ + + +NI+ D K + ++++ +E+ +++ ++ Y +LI G C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + +A M ++M + G +P+++TYN L G C+ND + A++ F ++ G P +
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ M+I+ C +GK+ + A ++ + V Y+ ++ G C N
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN------------ 451
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+E A +LF +L++KG + + L+ C G+ KA LL+ M
Sbjct: 452 ------------IEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTYTTMINSYCRMNSLK 305
+ ++P + Y+IV+ C G K A ++ R +V +Y ++ Y + L+
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLE 558
Query: 306 EALDLFQDMKRRGIKPDVITYTVL 329
+A L +M +G+ P+ ITY ++
Sbjct: 559 DANMLLNEMLEKGLVPNRITYEIV 582
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 107/186 (57%), Gaps = 4/186 (2%)
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS---LK 305
++P+ +++V++ALC GK AR + + G +P+VV+Y T+I+ YC++ +
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
+A + ++M + P++ T+ +L+ G +K+ L ++++M ++ +V+ Y+ L
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDN-LPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
INGL +AI + + M+ G++P+ +TY +I+ + K ++KEA ++ + +G
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 426 TPSSHI 431
P++ +
Sbjct: 398 VPTTRM 403
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ + + +G+ + + YN + + CK + +A++M ++ + + Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LI YC G + D F + EM+ +G PD+ TYN L AG+CRN A FD++ S
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN 174
G+ P+ T +++EG C G+ +A + ++ Y+ ++ GYC+ N
Sbjct: 465 KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH--YTTLIKGY 68
F + G+ D V ++I+ + C+ G+ A + +E+ + L +H Y ++KGY
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM--SKMGLKPRHLTYNIVMKGY 515
Query: 69 CLQGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C +GNL A M +M K + + ++ +YNVL G + + A +EM G+ PN
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKS 158
T++++ E + G V + E H + KS
Sbjct: 576 RITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 205/422 (48%), Gaps = 34/422 (8%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E K G+ D V YN + D K+G++DD + EE++ + D+ Y LI +C
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L + EMK G KP++V+Y+ L C+ + AI + +M G+ PN T
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +I+ C +G + +A N + VE Y+A+++G C+A
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER------------ 452
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+++A ELF ++ G I S L+ ++ +A++LL ++
Sbjct: 453 ------------MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
++P ++Y + LC + K + A+ + + G + + YTT++++Y + + E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYS 363
L L +MK I+ V+T+ VL+ G KN + A+D N I D + + ++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFG---LQANAAIFT 617
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+I+GL K + E A LFE M+ KGL PD+ YT ++ +K+G + EA L D+M+
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 424 GM 425
GM
Sbjct: 678 GM 679
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 204/433 (47%), Gaps = 19/433 (4%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G D V F+E K+ D + YN + + CK GK+ +E E++ + ++
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y+TL+ +C +G + A + +M+ G P+ TY L C+ A +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNN- 175
GVE N T+ +I+GLC ++ EAE F ++ V Y+A+++G+ +A N
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 176 ------NNNYGDDKSPTPISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
N G P + G C ++ +E A + E+ G A L+
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GF 284
G+ + + LL+ M+ L++E + + + +++D LC A F+ G
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+ +T MI+ C+ N ++ A LF+ M ++G+ PD YT L+ G+FK L+ +
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 345 TIWRD-MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
RD M + + LD++ Y+ L+ GL + + A E+MI +G+ PD+V ++
Sbjct: 670 L--RDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 404 YYKKGLMKEASEL 416
+Y+ G + EA EL
Sbjct: 728 HYELGCIDEAVEL 740
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 213/437 (48%), Gaps = 17/437 (3%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
++ +F L LG +++AI+ +++ + + L+ + G D F +M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
G +P + TYN++ +C+ + A F+EM+ G+ P++ T+ +I+G VG++
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 146 EAEAHFNRLQDKSVE----IYSAMVNGYCEASN-------NNNNYGDDKSPTPISEV--- 191
+ F ++D E Y+A++N +C+ G+ P +S
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 192 -GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
+CK ++++A + ++++ G + E + L+ C +G++ A +L M + VE
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
+ + Y+ ++D LC + K A LF G P++ +Y +I+ + + ++ AL+L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
++K RGIKPD++ Y ++G + ++ + +MK+ I + + Y+ L++
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWG-LCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTPSS 429
K+ N + + L ++M + +E VT+ +I K L+ +A + + +S+ G+ ++
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 430 HIISAVNRSILKARKVQ 446
I +A+ + K +V+
Sbjct: 614 AIFTAMIDGLCKDNQVE 630
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+L + R++ V P ++ + L +G + A F P + +++ +
Sbjct: 180 VLWSTRNVCV-PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
++ + F+DM G +P V TY +++ K ++ ++ +MK + D
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKE-GDVEAARGLFEEMKFRGLVPDT 297
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
V Y+ +I+G K +D + FE+M D EPD +TY +I+ + K G + E E
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYRE 357
Query: 420 MSSKGMTPS----SHIISAVNRSILKARKVQFH 448
M G+ P+ S ++ A + + + ++F+
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 205/426 (48%), Gaps = 34/426 (7%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V+ F + G+ D +YNIV + LC+ + A+ + ++ + D+ ++LI
Sbjct: 88 VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G+C + DA + ++M+ GF+PD+V YN + G C+ A+ FD ME DGV
Sbjct: 148 GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNR---LQD--KSVEIYSAMVNGYCEASNNNNNYGD 181
++ T+ ++ GLC G+ +A A R ++D +V ++A+++ + +
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDA-ARLMRDMVMRDIVPNVITFTAVIDVFVKEG-------- 258
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
K K YE D+ S L+ LC+ G + +A ++L
Sbjct: 259 -------------KFSEAMKLYEEMTRRCVDPDVFTYNS---LINGLCMHGRVDEAKQML 302
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M + P + Y+ +++ C + LF RG D +TY T+I Y +
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
A ++F M R P++ TY++LLYG N + ++ +M+++EI LD+
Sbjct: 363 GRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL-VLFENMQKSEIELDITT 418
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y+++I+G+ K N EDA LF + KGL+PD V+YT MIS + +K ++ L +M
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 422 SKGMTP 427
G+ P
Sbjct: 479 EDGLLP 484
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 161/332 (48%), Gaps = 20/332 (6%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D +D + +E G D V YN + D CK+G V+DA+E+ + + + D Y +L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G DA + +M + P+++T+ + + + A+ ++EM V+
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNN--- 178
P+ T+ +I GLC G+V EA+ + + K V Y+ ++NG+C++ +
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 179 ---------YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
GD + I + GY + + A E+F + ++ +I LL LC
Sbjct: 337 FREMAQRGLVGDTITYNTIIQ-GYFQAGRPDAAQEIFSRMDSRPNIRTYSI---LLYGLC 392
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
+ + KA+ L E M+ +E Y+IV+ +C +G + A LF S +G PDVV
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
+YTTMI+ +CR ++ L++ M+ G+ P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 1/229 (0%)
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
+E+ +LF ++ + K+L+K+ + + L M + Y+I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
V++ LC + A S+ + G+ PDVVT +++IN +C+ N + +A+DL M+ G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
+PDV+ Y ++ GS K D + R M++ + D V Y+ L+ GL + + DA
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDR-MERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
RL DM+ + + P+ +T+T +I ++ K+G EA +L +EM+ + + P
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
LC A+ ++ M EP + S +++ C + A L GF PD
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
VV Y T+I+ C++ + +A++LF M+R G++ D +TY L+ G + D +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM- 232
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
RDM +I +V+ ++ +I+ +K + +A++L+E+M + ++PD TY +I+
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G + EA ++LD M +KG P + + K+++V
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ + ++E + D YN + + LC G+VD+A +M + + K D+ Y
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TLI G+C + + +F EM +G D +TYN + G + A F M+S
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
PN T+ +++ GLC +V +A F +Q +E+
Sbjct: 378 ---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIEL-------------------- 414
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKG 213
D + I G CK+ VE A++LF LS KG
Sbjct: 415 DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
+L+E +DLF M + P ++ ++ +L + D++ +++ M+ I D+ Y
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVL-SKIAKSKNYDLVISLFHHMEVCGIGHDLYSY 107
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+++IN L + + A+ + M+ G EPD VT + +I+ + + + +A +L+ +M
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 423 KGMTPSSHIISAV 435
G P I + +
Sbjct: 168 MGFRPDVVIYNTI 180
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 217/458 (47%), Gaps = 62/458 (13%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YN + + CKLG V++A + ++ +D D YT+LI GYC + +L AF +FNEM
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 85 KNKGFK-----------------------------------PDIVTYNVLAAGVCRNDEA 109
KG + P + TY VL +C ++
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339
Query: 110 RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAM 165
A+N EME G++PN T+ ++I+ LCS K +A ++ +K +V Y+A+
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399
Query: 166 VNGYC-----EASNNNNNYGDDKSPTPISEV------GYCKVDLVEKAYELFLELSNKGD 214
+NGYC E + + + + +P + GYCK + V KA + ++ +
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKV 458
Query: 215 IAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARS 274
+ + L+ C G+ A +LL M + P Q Y+ ++D+LC + + A
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 275 LFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG-- 332
LFDS +G P+VV YT +I+ YC+ + EA + + M + P+ +T+ L++G
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 333 ---SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
K A L+ + + Q +S D ++LI+ L+K +++ A F+ M+ G
Sbjct: 579 ADGKLKEATLLE--EKMVKIGLQPTVSTD----TILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 390 LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+PD TYT I Y ++G + +A +++ +M G++P
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 209/452 (46%), Gaps = 49/452 (10%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
E G+ + + YN + + CK G ++DA+++ E + + + + + Y LIKGYC + N+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVH 444
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
A + N+M + PD+VTYN L G CR+ A M G+ P+ T+ +I
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+ LC +V EA F+ L+ K V +Y+A+++GYC+A
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK----------------- 547
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
V++A+ + ++ +K + + L+ LC G + +A L E M + ++P
Sbjct: 548 -------VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ +I++ L G HA S F + G PD TYTT I +YCR L +A D+
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
M+ G+ PD+ TY+ L+ G + + + + + M+ T + LI L++
Sbjct: 661 AKMRENGVSPDLFTYSSLIKG-YGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 372 TD------------------NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
++ + L E M++ + P+ +Y +I + G ++ A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 414 SELLDEMS-SKGMTPSSHIISAVNRSILKARK 444
++ D M ++G++PS + +A+ K +K
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKK 811
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 194/381 (50%), Gaps = 35/381 (9%)
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
+K I YN L + R + EM D V PN T+ ++ G C +G V EA
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 149 AHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY---------GDDKSPTPISEV--GY 193
+ +++ + ++ Y++++ GYC+ + ++ + G ++ + + G
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFK-------LLTKLCLVGDIGKAMKLLETMRS 246
C +++A +LF+++ K++ CF L+ LC +A+ L++ M
Sbjct: 299 CVARRIDEAMDLFVKM-------KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
++P+ Y++++D+LC K + AR L + +G P+V+TY +IN YC+ +++
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA--ALDVINTIWRDMKQTEISLDVVCYSV 364
A+D+ + M+ R + P+ TY L+ G K+ A+ V+N M + ++ DVV Y+
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN----KMLERKVLPDVVTYNS 467
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI+G ++ N++ A RL M D+GL PD+ TYT MI K ++EA +L D + KG
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 425 MTPSSHIISAVNRSILKARKV 445
+ P+ + +A+ KA KV
Sbjct: 528 VNPNVVMYTALIDGYCKAGKV 548
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 181/404 (44%), Gaps = 18/404 (4%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ D F ++ G+ + V Y + D CK GKVD+A M E++ KN + + LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G L +A + +M G +P + T +L + ++ + A + F +M S G +
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD 181
P++ T+ I+ C G++ +AE ++++ V YS+++ GY + N +
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSN---KGDIAKEESCFKLLTKLCLVGDIGKAM 238
K + + G E + FL L + K++ L + + + +
Sbjct: 695 LKR---MRDTG------CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV-GRGFTPDVVTYTTMINS 297
+LLE M +V P+ Y ++ +C VG + A +FD G +P + + +++
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
C++ EA + DM G P + + VL+ G +K + ++++++ Q
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK-ERGTSVFQNLLQCGYYE 864
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
D + + ++I+G+ K E LF M G + TY+ +I
Sbjct: 865 DELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNV-EPSQIMYSIV-------LDALCHVGKTKHARSL 275
L+ K C +G A+ +L+ R +N E ++ Y ++ L++L G + +
Sbjct: 148 LMIKSC--DSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQV 205
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
+ + P++ TY M+N YC++ +++EA + G+ PD TYT L+ G +
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG-YC 264
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
LD ++ +M + V Y+ LI+GL ++A+ LF M D P
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
TYT +I EA L+ EM G+ P+ H + + S+ K +
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFE 375
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 224/520 (43%), Gaps = 84/520 (16%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D V+ F + +S F V ++ + A+ K+ K D I + E+++ I ++ Y+ LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C + L A + +M G++PDIVT N L G C + A++ +M G +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
P+S T +I GL + EA A +R+ K + Y +VNG C+ +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
G + I C V A LF E+ NKG + L+ LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + +S ++DA GK A L+D + R PD+ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 291 YTTMINSYCRMNSLKEA-----------------------------------LDLFQDMK 315
Y+++IN +C + L EA ++LF++M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 316 RRGIKPDVITYTVLLYGSFK----------------------------------NAAALD 341
+RG+ + +TYT L++G F+ N ++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE 483
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
++ ++++++ D+ Y+++I G+ K ED LF + KG++P+ VTYT M+
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
S + +KGL +EA L EM +G P S + + R+ L+
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 193/437 (44%), Gaps = 51/437 (11%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V Y IV + LCK G +D A+ + +++ I+ + Y T+I C N+ DA +F
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
EM NKG +P++VTYN L +C A +M + PN T +I+
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISE 190
GK+ EAE ++ + +S++ YS+++NG+C + D P ++
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 191 ----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
G+CK V++ ELF E+S +G + + L+ + A + + M S
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
V P + YSI+LD LC+ GK + A +F+ PD+ TY MI C+ +++
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
DLF + +G+KP+V+TYT ++
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMM------------------------------------ 543
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+G + E+A LF +M ++G PD TY +I + + G ++EL+ EM S
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Query: 427 PSSHIISAVNRSILKAR 443
+ I V + R
Sbjct: 604 GDASTIGLVTNMLHDGR 620
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 175/372 (47%), Gaps = 35/372 (9%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D ++ F E G+ + V YN + LC G+ DA + ++ + I+ ++ ++ L
Sbjct: 273 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 332
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I + +G L++A +++EM + PDI TY+ L G C +D A + F+ M S
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
PN T+ +I+G C +V E F + + + Y+ +++G+ +A +N
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN--- 449
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
A +F ++ + G + + LL LC G + A+ +
Sbjct: 450 ---------------------AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E ++ +EP Y+I+++ +C GK + LF S +G P+VVTYTTM++ +CR
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISL 357
+EA LF++MK G PD TY L+ ++ AA+ ++I R+M+
Sbjct: 549 KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI----REMRSCRFVG 604
Query: 358 DVVCYSVLINGL 369
D ++ N L
Sbjct: 605 DASTIGLVTNML 616
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT 327
K A +LF V P +V ++ ++++ +MN + L + M+ GI ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 328 VLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+L+ F + L + + M + D+V + L+NG + DA+ L M++
Sbjct: 121 ILI-NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
G +PD T+ +I ++ EA L+D M KG P
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 206/449 (45%), Gaps = 51/449 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G SD V E+G + V Y V + +CK G+ A+E+ ++ +NI LD Y
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ +I G C G+L +AF +FNEM+ KGFK DI+TYN L G C +M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC-----EA 172
+ PN T ++I+ GK+ EA+ + + + Y+++++G+C E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 173 SNNNNNYGDDKSPTP------ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
+ + K P I GYCK + ++ ELF E+S +G IA
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA---------- 436
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
+ + Y+ ++ C GK + A+ LF V R P
Sbjct: 437 -------------------------NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
D+V+Y +++ C L++AL++F +++ ++ D+ Y ++++G NA+ +D +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG-MCNASKVDDAWDL 530
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ + + LD Y+++I+ L + D+ A LF M ++G PD++TY +I +
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAV 435
A+EL++EM S G + V
Sbjct: 591 DDDATTAAELIEEMKSSGFPADVSTVKMV 619
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 208/455 (45%), Gaps = 16/455 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D VD F++ +S + +N +F A+ K + + + + +++ K I I + +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C L AF ++ G++PD V +N L G+C A+ D M G +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNN------ 175
P T ++ GLC GKV +A +R+ + + Y ++N C++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 176 -----NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
N D I G CK ++ A+ LF E+ KG A + L+ C
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G KLL M + P+ + +S+++D+ GK + A L + RG P+ +T
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y ++I+ +C+ N L+EA+ + M +G PD++T+ +L+ G K A +D ++R+M
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK-ANRIDDGLELFREM 429
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+ + V Y+ L+ G ++ E A +LF++M+ + + PD V+Y ++ G +
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
++A E+ ++ M I + + A KV
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 205/421 (48%), Gaps = 16/421 (3%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V +N + + LC +V +A+E+ + + + TL+ G CL G + DA +
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ M GF+P+ VTY + +C++ + +A+ +ME ++ ++ + +II+GLC
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISE 190
G + A FN ++ K + Y+ ++ G+C A ++ SP ++
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 191 V----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+ K + +A +L E+ +G + L+ C + +A+++++ M S
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+P + ++I+++ C + LF RG + VTY T++ +C+ L+
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A LFQ+M R ++PD+++Y +LL G N L+ I+ ++++++ LD+ Y ++I
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE-LEKALEIFGKIEKSKMELDIGIYMIII 515
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+G+ +DA LF + KG++ D Y MIS +K + +A L +M+ +G
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 427 P 427
P
Sbjct: 576 P 576
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 32/292 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
KE + G+ + + YN + D CK ++++AI+M + + K D DI + LI GYC
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ D +F EM +G + VTYN L G C++ + VA F EM S V P+ +
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
+K++++GLC G++ +A F +++ +E IY +++G C AS
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASK------------ 523
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
V+ A++LF L KG + ++++LC + KA L M
Sbjct: 524 ------------VDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 247 LNVEPSQIMYSIVLDALCHVG--KTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
P ++ Y+I++ A H+G A L + GF DV T +IN
Sbjct: 572 EGHAPDELTYNILIRA--HLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 176/403 (43%), Gaps = 53/403 (13%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ ++ +E + LD V Y+I+ D LCK G +D+A + E+ +K DI Y
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TLI G+C G D + +M + P++VT++VL + + R A EM
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEA----EAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
G+ PN+ T+ +I+G C ++ EA + ++ D + ++ ++NGYC+A+ ++
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 178 N---YGDDKSPTPISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
+ + I+ G+C+ +E A +LF E+ ++ S LL
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF------- 279
LC G++ KA+++ + +E +Y I++ +C+ K A LF S
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 280 ----------------------------VGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
G PD +TY +I ++ + A +L
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 312 QDMKRRGIKPDVITYTV---LLYGSFKNAAALDVINTIWRDMK 351
++MK G DV T + +L + + LD+++T +K
Sbjct: 602 EEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 206/425 (48%), Gaps = 28/425 (6%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G D + Y + + LCK+G+VD A ++L + +I + TLI G+ G L DA
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 78 FYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
+ ++M + G PD+ TYN L G + +A+ +M + G +PN ++ ++++
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY-CEASNNNNNYGDDKSPTPISEVGYCK 195
G C +GK+ EA +N L + S + G+ C S +CK
Sbjct: 433 GFCKLGKIDEA---YNVLNEMSADGLKPNTVGFNCLIS------------------AFCK 471
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
+ +A E+F E+ KG + L++ LC V +I A+ LL M S V + +
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
Y+ +++A G+ K AR L + V +G D +TY ++I CR + +A LF+ M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
R G P I+ +L+ G ++ + + ++M + D+V ++ LINGL +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
ED + +F + +G+ PD VT+ ++S K G + +A LLDE G P+ S +
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 436 NRSIL 440
+SI+
Sbjct: 711 LQSII 715
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 199/434 (45%), Gaps = 13/434 (2%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
+ +V A C + ++D A+ + ++ + Y TLI + +A + EM
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G PD T+N + G+C+ D A + M G P+ T+ ++ GLC +G+V
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV 338
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCE----------ASNNNNNYGDDKSPTPISEV--G 192
A+ F R+ + I++ +++G+ S+ +YG + + G
Sbjct: 339 DAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K LV A E+ ++ NKG S L+ C +G I +A +L M + ++P+
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ ++ ++ A C + A +F +G PDV T+ ++I+ C ++ +K AL L +
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
DM G+ + +TY L+ +F + + +M LD + Y+ LI GL +
Sbjct: 519 DMISEGVVANTVTYNTLI-NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRA 577
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ A LFE M+ G P ++ +I+ + G+++EA E EM +G TP
Sbjct: 578 GEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 433 SAVNRSILKARKVQ 446
+++ + +A +++
Sbjct: 638 NSLINGLCRAGRIE 651
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 8 VDKFKEFKESGMFLDG-----VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
VDK + E M DG ++ NI+ + LC+ G V++A+E ++E+ ++ DI +
Sbjct: 580 VDKARSLFEK-MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+LI G C G + D MF +++ +G PD VT+N L + +C+ A DE D
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIED 698
Query: 123 GVEPNSTTHKMIIEGL 138
G PN T ++++ +
Sbjct: 699 GFVPNHRTWSILLQSI 714
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 2/215 (0%)
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL-NVEPSQIMYSIVLDA 262
L +++ ++G + KE ++ G G+ +L+ MR++ + EP+ Y++VL+
Sbjct: 132 RLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
L K A ++F + R P + T+ ++ ++C +N + AL L +DM + G P+
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+ Y L++ S ++ + +M D ++ +I GL K D +A ++
Sbjct: 252 SVIYQTLIH-SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
M+ +G PD +TY +++ K G + A +L
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 207/426 (48%), Gaps = 29/426 (6%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YNI+ + C+ ++ A+ + ++ + I ++L+ GYC + DA + ++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G++PD +T+ L G+ +++A A+ D M G +PN T+ +++ GLC G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 145 GEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
A N+++ +E IYS +++ C+ + ++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD----------------------- 278
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
A LF E+ NKG + L++ LC A +LL M + P+ + ++ ++
Sbjct: 279 -ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
DA GK A L+D + R PD+ TY+++IN +C + L EA +F+ M +
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
P+V+TY L+ G F A +D ++R+M Q + + V Y+ LI+G + + ++A
Sbjct: 398 PNVVTYNTLING-FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSIL 440
+F+ M+ G+ P+ +TY ++ K G +++A + + + M P+ + + + +
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 441 KARKVQ 446
KA KV+
Sbjct: 517 KAGKVE 522
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 165/344 (47%), Gaps = 16/344 (4%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V Y +V + LCK G +D A + ++ I+ ++ Y+T+I C + DA +F E
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+NKG +P+++TY+ L + +C + A +M + PN T +I+ GK
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISEV- 191
+ EAE ++ + +S++ YS+++NG+C + D P ++
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 192 ---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
G+CK +++ ELF E+S +G + + L+ D A + + M S
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
V P+ + Y+ +LD LC GK + A +F+ P + TY MI C+ +++
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
DLF + +G+KPDVI Y ++ G F + + ++R M++
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISG-FCRKGLKEEADALFRKMRE 568
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 151/323 (46%), Gaps = 28/323 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ D ++ F E + G+ + + Y+ + LC + DA + ++ + I+ ++ +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
LI + +G L++A +++EM + PDI TY+ L G C +D A + F+ M S
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNY 179
PN T+ +I G C ++ E F + + + Y+ +++G+ +A + +N
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN-- 453
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
A +F ++ + G + LL LC G + KAM
Sbjct: 454 ----------------------AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+ E ++ +EP+ Y+I+++ +C GK + LF S +G PDV+ Y TMI+ +C
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 300 RMNSLKEALDLFQDMKRRGIKPD 322
R +EA LF+ M+ G PD
Sbjct: 552 RKGLKEEADALFRKMREDGPLPD 574
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 34/257 (13%)
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
KLL+ + + + L E M+ L + + Y+I+++ C + A +L +
Sbjct: 90 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA--- 339
G+ P +VT ++++N YC + +A+ L M G +PD IT+T L++G F + A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 340 -------------------------------LDVINTIWRDMKQTEISLDVVCYSVLING 368
+D+ + M+ +I +VV YS +I+
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L K + +DA+ LF +M +KG+ P+ +TY+ +IS +AS LL +M + + P+
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 429 SHIISAVNRSILKARKV 445
+A+ + +K K+
Sbjct: 330 VVTFNALIDAFVKEGKL 346
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK+ G+ + + YN + D LCK GK++ A+ + E L+ ++ I Y +I+G C
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + D + +F + KG KPD++ YN + +G CR A F +M DG P+S T
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
PS ++ +L A+ + K SL + G + ++ TY +IN +CR + + AL L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
M + G +P ++T + LL G D + + M + D + ++ LI+GL
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHGLF 201
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ +A+ L + M+ +G +P+ VTY +++ K+G + A LL++M + + +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 431 IISAVNRSILKAR 443
I S V S+ K R
Sbjct: 262 IYSTVIDSLCKYR 274
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
Y +L H K A LF V P + + ++++ +M + L + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
R GI ++ TY +L+ F + + + + M + +V S L+NG
Sbjct: 113 RLGISHNLYTYNILI-NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
DA+ L + M++ G PD +T+T +I + EA L+D M +G P+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 217/486 (44%), Gaps = 62/486 (12%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E K+ + + Y V +C G +D A + +E+ ++ YTTLIK +
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEMESDGVEPNST 129
DA + EMK +G PDI YN L G+ R DEAR + EM +G++PN+
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR---SFLVEMVENGLKPNAF 523
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASN----------- 174
T+ I G + A+ + +++ V + + ++N YC+
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM 583
Query: 175 -NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+ GD K+ T + G K D V+ A E+F E+ KG S L+ +G+
Sbjct: 584 VDQGILGDAKTYTVLMN-GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ KA + + M + P+ I+Y+++L C G+ + A+ L D +G P+ VTY T
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL---------------LYGSFKNAA 338
+I+ YC+ L EA LF +MK +G+ PD YT L ++G+ K
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 339 ALD------VINTIWRDMKQTEISLDV-----------------VCYSVLINGLMKTDNY 375
A +IN +++ +TE+ +V V Y+++I+ L K N
Sbjct: 763 ASSTAPFNALINWVFK-FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
E A LF M + L P +TYT +++ Y K G E + DE + G+ P + S +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 436 NRSILK 441
+ LK
Sbjct: 882 INAFLK 887
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 190/407 (46%), Gaps = 43/407 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ + G+ D Y ++ + L K KVDDA E+ E+R K I D+ Y LI G+
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSK 639
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GN+ A +F+EM +G P+++ YN+L G CR+ E A DEM G+ PN+ T
Sbjct: 640 LGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
+ II+G C G + EA F+ ++ K + +Y+ +V+G C
Sbjct: 700 YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG-C---------------- 742
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
C+++ VE+A +F +NK A + F L V GK E +
Sbjct: 743 -------CRLNDVERAITIF--GTNKKGCASSTAPFNALIN--WVFKFGKTELKTEVLNR 791
Query: 247 LN-------VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
L +P+ + Y+I++D LC G + A+ LF P V+TYT+++N Y
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK---NAAALDVINTIW-RDMKQTEI 355
+M E +F + GI+PD I Y+V++ K AL +++ ++ ++
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGC 911
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
L + L++G K E A ++ E+M+ PD T ++I+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 196/427 (45%), Gaps = 29/427 (6%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E G+ + Y+ + K G ++ A + + + + + Y +LI+GYC +
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
N+ + + EMK + TY + G+C + + A N EM + G PN +
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+I+ + G+A ++++ + Y++++
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI---------------------- 494
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
+G K +++A +E+ G + ++ + A K ++ MR
Sbjct: 495 --IGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
V P++++ + +++ C GK A S + S V +G D TYT ++N + + + +A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
++F++M+ +GI PDV +Y VL+ G F + ++I+ +M + ++ +V+ Y++L+ G
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLING-FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
++ E A L ++M KGL P+ VTY +I Y K G + EA L DEM KG+ P
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 429 SHIISAV 435
S + + +
Sbjct: 732 SFVYTTL 738
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 200/467 (42%), Gaps = 72/467 (15%)
Query: 8 VDKFKEFKES----GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
VD + KES G+ Y+++ D LCK+ +++DA + E+ + LD Y+
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
LI G N A + +EM + G Y+ + + A FD M + G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNY 179
+ P + + +IEG C V + ++ +++ I Y +V G C + + + Y
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 180 GDDKSPTPISEVGYCKVDLV--EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
K C+ ++V + FL+ S GD A
Sbjct: 438 NIVKEMIASG----CRPNVVIYTTLIKTFLQNSRFGD----------------------A 471
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY------ 291
M++L+ M+ + P Y+ ++ L + ARS V G P+ TY
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 292 -----------------------------TTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
T +IN YC+ + EA ++ M +GI D
Sbjct: 532 YIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGD 591
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
TYTVL+ G FKN +D I+R+M+ I+ DV Y VLING K N + A +F
Sbjct: 592 AKTYTVLMNGLFKNDK-VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
++M+++GL P+ + Y ++ + + G +++A ELLDEMS KG+ P++
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 195/439 (44%), Gaps = 42/439 (9%)
Query: 28 IVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL------------- 74
++ DAL + ++D ++ + + +N+ D+K Y LI +C GN+
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE 250
Query: 75 -------IDAFYMFNE-MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
+D E M KG P TY+VL G+C+ A + EM+S GV
Sbjct: 251 FRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSL 310
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
++ T+ ++I+GL L+ ++ + +V+ N Y D
Sbjct: 311 DNHTYSLLIDGL---------------LKGRNADAAKGLVHEMVSHGINIKPYMYDCCIC 355
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+S+ G ++EKA LF + G I + ++ L+ C ++ + +LL M+
Sbjct: 356 VMSKEG-----VMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
N+ S Y V+ +C G A ++ + G P+VV YTT+I ++ + + +
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A+ + ++MK +GI PD+ Y L+ G A +D + +M + + + Y I
Sbjct: 471 AMRVLKEMKEQGIAPDIFCYNSLIIG-LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+G ++ + A + ++M + G+ P+KV T +I+ Y KKG + EA M +G+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 427 PSSHIISAVNRSILKARKV 445
+ + + + K KV
Sbjct: 590 GDAKTYTVLMNGLFKNDKV 608
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 220/499 (44%), Gaps = 62/499 (12%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDA----IEMRE-------------- 47
D + KE KE G+ D YN + L K ++D+A +EM E
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 48 -----------------ELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFK 90
E+R + + T LI YC +G +I+A + M ++G
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 91 PDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
D TY VL G+ +ND+ A F EM G+ P+ ++ ++I G +G + +A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 151 FNRLQDK----SVEIYSAMVNGYCEAS--NNNNNYGDDKS-----PTPISEV----GYCK 195
F+ + ++ +V IY+ ++ G+C + D+ S P ++ GYCK
Sbjct: 650 FDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
+ +A+ LF E+ KG + L+ C + D+ +A+ + T + S
Sbjct: 710 SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAP 768
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGF----TPDVVTYTTMINSYCRMNSLKEALDLF 311
++ +++ + GKT+ + + + F P+ VTY MI+ C+ +L+ A +LF
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
M+ + P VITYT LL G K ++ ++ + I D + YSV+IN +K
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMF-PVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 372 TDNYEDAIRLFEDM-----IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
A+ L + M +D G + T ++S + K G M+ A ++++ M
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 427 P-SSHIISAVNRSILKARK 444
P S+ +I +N S + + +
Sbjct: 948 PDSATVIELINESCISSNQ 966
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 176/437 (40%), Gaps = 69/437 (15%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ L GY +G + +A ++F+ P + VL + R + + + + M
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMV 213
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVG-------EAEAHFNRLQ---DKSVEIYSAMVNGYC 170
V + T+ M+I C G V + E F D ++++ +M+ C
Sbjct: 214 ERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI---C 270
Query: 171 EASNNNNNYGDDKSPTPISEV------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
K P+ G CK+ +E A L +E+ + G ++ + + L
Sbjct: 271 ------------KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG-VSLDNHTYSL 317
Query: 225 LTKLCLVGDIGKAMK-LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L L G A K L+ M S + MY + + G + A++LFD + G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR-------------------------- 317
P Y ++I YCR ++++ +L +MK+R
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 318 ---------GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
G +P+V+ YT L+ +N+ D + + ++MK+ I+ D+ CY+ LI G
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL-KEMKEQGIAPDIFCYNSLIIG 496
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L K ++A +M++ GL+P+ TY IS Y + A + + EM G+ P+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 429 SHIISAVNRSILKARKV 445
+ + + K KV
Sbjct: 557 KVLCTGLINEYCKKGKV 573
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 22/236 (9%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G I +A+ + + L + P ++LDAL + ++ V R DV TY
Sbjct: 165 GYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTY 224
Query: 292 TTMINSYCRMNSLK---------------------EALDLFQDMKRRGIKPDVITYTVLL 330
+I ++CR +++ AL L + M +G+ P TY VL+
Sbjct: 225 HMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLI 284
Query: 331 YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL 390
G K L+ ++ +M +SLD YS+LI+GL+K N + A L +M+ G+
Sbjct: 285 DGLCK-IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 391 EPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
Y I + K+G+M++A L D M + G+ P + +++ + + V+
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA---RSLFDSFV 280
L LC G KA+ ++E M N +++ SIV + VGK+ LFD ++
Sbjct: 103 LALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYI 162
Query: 281 GRGF----------------TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
+G+ P + ++++ R N L D+++ M R + DV
Sbjct: 163 AKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVK 222
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY +L+ + + +++ K+ + T N + A++L E
Sbjct: 223 TYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTA---------------TLNVDGALKLKES 267
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
MI KGL P K TY +I K +++A LL EM S G++ +H S + +LK R
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 212/423 (50%), Gaps = 21/423 (4%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+S + LD ++ I+ C+ G+++ + ++ EL ++ YTTLI G C +G +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
A +F EM G + TY VL G+ +N + +++M+ DGV PN T+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
LC G+ +A F+ ++++ V C N G G C+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVS---------CNIVTYNTLIG-----------GLCR 315
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
+ +A ++ ++ + G + L+ C VG +GKA+ L ++S + PS +
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
Y+I++ C G T A + RG P VTYT +I+++ R +++++A+ L M+
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
G+ PDV TY+VL++G F ++ + +++ M + + V Y+ +I G K +
Sbjct: 436 ELGLVPDVHTYSVLIHG-FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
A++L ++M +K L P+ +Y MI + K+ KEA L+++M G+ PS+ I+S +
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Query: 436 NRS 438
+R+
Sbjct: 555 SRA 557
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 36/382 (9%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +I Y +L + FNEM + GF P +N L V + + F+E +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD-------KSVEIYSAMVNGYCEAS 173
S V + + ++I+G C + GE E F+ L + +V IY+ +++G C+
Sbjct: 157 SK-VVLDVYSFGILIKGCC---EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+EKA +LF E+ G +A E + L+ L G
Sbjct: 213 E------------------------IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ ++ E M+ V P+ Y+ V++ LC G+TK A +FD RG + ++VTY T
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I CR L EA + MK GI P++ITY L+ G F L ++ RD+K
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG-FCGVGKLGKALSLCRDLKSR 367
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+S +V Y++L++G + + A ++ ++M ++G++P KVTYT +I + + M++A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 414 SELLDEMSSKGMTPSSHIISAV 435
+L M G+ P H S +
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVL 449
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 181/399 (45%), Gaps = 68/399 (17%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D F E + G+ + Y ++ + L K G EM E+++ + ++ Y ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G DAF +F+EM+ +G +IVTYN L G+CR + A D+M+SDG+ PN
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ +I+G C VGK+G+A + L+ + S+ Y+ +V+G+C + + G K
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS---GAAKM 395
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
+ E G + + Y + ++ + D ++ KA++L +M
Sbjct: 396 VKEMEERG---IKPSKVTYTILIDTFARSD------------------NMEKAIQLRLSM 434
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
L + P YS+++ C G+ A LF S V + P+ V Y TMI YC+ S
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
AL L ++M+ + + P+V +Y + ++V+C
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYM---------------------------IEVLC--- 524
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
K ++A RL E MID G++P T ++SL
Sbjct: 525 ------KERKSKEAERLVEKMIDSGIDPS----TSILSL 553
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 28/291 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D F E +E G+ + V YN + LC+ K+++A ++ ++++ I+ ++ Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TLI G+C G L A + ++K++G P +VTYN+L +G CR + A EME
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNN 177
G++P+ T+ ++I+ + +A +++ V YS +++G+C N
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN- 460
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+A LF + K E ++ C G +A
Sbjct: 461 -----------------------EASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV 288
+KLL+ M + P+ Y +++ LC K+K A L + + G P
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S KE +E G+ V Y I+ D + ++ AI++R + + D+ Y
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ LI G+C++G + +A +F M K +P+ V YN + G C+ + A+ EME
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
+ PN +++ +IE LC K EAE ++ D ++ +++++ A N+++
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDSH 562
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR-- 348
Y +INSY + SL ++ F +M G P + LL +++ N W
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSS----FNQWWSFF 152
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+ ++++ LDV + +LI G + E + L ++ + G P+ V YT +I KKG
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
+++A +L EM G+ + + + + K
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 199/421 (47%), Gaps = 21/421 (4%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YNI+ + C+ ++ A+ + ++ + I ++L+ GYC + DA + ++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G++PD +T+ L G+ +++A A+ D M G +PN T+ +++ GLC G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
A N+++ +E + N ++ CK V+ A
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDS--------------------LCKYRHVDDALN 281
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
LF E+ KG + L++ LC G A +LL M + P+ + ++ ++DA
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
GK A L+D + R PD+ TY +++N +C + L +A +F+ M + PDV+
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY L+ G K+ D ++R+M + D V Y+ LI GL + ++A ++F+
Sbjct: 402 TYNTLIKGFCKSKRVEDG-TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M+ G+ PD +TY+ ++ G +++A E+ D M + +I + + + KA K
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 445 V 445
V
Sbjct: 521 V 521
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 189/415 (45%), Gaps = 53/415 (12%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V Y +V + LCK G D A+ + ++ I+ D+ + T+I C ++ DA +F E
Sbjct: 226 VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 285
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+ KG +P++VTY+ L + +C A +M + PN T +I+ GK
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYC------------EASNNNNNYGDDKSPTP 187
EAE ++ + +S++ Y+++VNG+C E + + + D +
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+ + G+CK VE ELF E+S++G + + L+ L GD A K+ + M S
Sbjct: 406 LIK-GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
V P + YSI+LD LC+ GK + A +FD D+ YTTMI C+ + +
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
DLF + +G+KP+V+T Y+ +I+
Sbjct: 525 WDLFCSLSLKGVKPNVVT------------------------------------YNTMIS 548
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
GL ++A L + M + G P+ TY +I + + G ++EL+ EM S
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 208/436 (47%), Gaps = 22/436 (5%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V + + + C ++ DA+ + +++ D +TTLI G L +A + +
Sbjct: 156 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M +G +P++VTY V+ G+C+ + +A+N ++ME+ +E + II+ LC
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYC------EASNNNNNYGDDK-SPTPIS--- 189
V +A F ++ K + YS++++ C +AS ++ + K +P ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 190 ----EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
V K EK Y+ ++ S DI S L+ C+ + KA ++ E M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS---LVNGFCMHDRLDKAKQMFEFMV 392
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S + P + Y+ ++ C + + LF RG D VTYTT+I
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
A +F+ M G+ PD++TY++LL G N L+ ++ M+++EI LD+ Y+ +
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDG-LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTM 511
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I G+ K +D LF + KG++P+ VTY MIS K L++EA LL +M G
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGP 571
Query: 426 TPSSHIISAVNRSILK 441
P+S + + R+ L+
Sbjct: 572 LPNSGTYNTLIRAHLR 587
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 167/371 (45%), Gaps = 35/371 (9%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D ++ FKE + G+ + V Y+ + LC G+ DA ++ ++ K I+ ++ + LI
Sbjct: 278 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+ +G ++A ++++M + PDI TYN L G C +D A F+ M S
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGD 181
P+ T+ +I+G C +V + F + + + Y+ ++ G + +N
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN---- 453
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
A ++F ++ + G + LL LC G + KA+++
Sbjct: 454 --------------------AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M+ ++ +Y+ +++ +C GK LF S +G P+VVTY TMI+ C
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLD 358
L+EA L + MK G P+ TY L+ ++ AA+ ++I R+M+ D
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI----REMRSCRFVGD 609
Query: 359 VVCYSVLINGL 369
++ N L
Sbjct: 610 ASTIGLVANML 620
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 187/382 (48%), Gaps = 39/382 (10%)
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
L DA +F M P IV +N L + + + + V I+ ++M+ + T+ +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 134 IIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+I C ++ A A ++ + S+ S+++NGYC IS
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-------------IS 172
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
+ V LV++ +E+ + D + L+ L L +A+ L++ M
Sbjct: 173 DA----VALVDQ----MVEMGYRPDTITFTT---LIHGLFLHNKASEAVALVDRMVQRGC 221
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+P+ + Y +V++ LC G T A +L + DVV + T+I+S C+ + +AL+
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 310 LFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
LF++M+ +GI+P+V+TY+ L+ YG + +A+ L DM + +I+ ++V ++
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL------LSDMIEKKINPNLVTFNA 335
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI+ +K + +A +L++DMI + ++PD TY +++ + + +A ++ + M SK
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 425 MTPSSHIISAVNRSILKARKVQ 446
P + + + K+++V+
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVE 417
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 217/481 (45%), Gaps = 65/481 (13%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E K SG V + I+ DA CK GK+D+A+ +E++ ++ D+ YT+LI+G+C G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
L +F+E+ +G P +TYN L G C+ + + A F+ M GV PN T+
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDK------------------------SVEI------- 161
+I+GLC VGK EA N + +K +VEI
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 162 --------YSAMVNGYC------EASN------NNNNYGDDKSPTPISE----VGYCKVD 197
Y+ ++ G C EAS +++Y D P IS G CK +
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD---PDVISYNALIHGLCKEN 438
Query: 198 LVEKA---YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
+ +A Y+L +E GD LL GD+ KAM+L + + + +
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+ ++D C G A+ L P V Y +++S C+ SL +A LF++M
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
+R PDV+++ +++ GS K A + ++ M + +S D+ YS LIN +K
Sbjct: 556 QRDNNFPDVVSFNIMIDGSLK-AGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
++AI F+ M+D G EPD ++ +G + +EL+ ++ K + +
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCT 674
Query: 435 V 435
V
Sbjct: 675 V 675
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 202/430 (46%), Gaps = 29/430 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+++ E+ F++ V+ + + + ++ K A + + + ++ ++ L+KG C
Sbjct: 95 YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR 154
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
A + EM+ PD+ +YN + G C E A+ +EM+ G + T
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
++I+ C GK+ EA ++ +E +Y++++ G+C+
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE------------ 262
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+++ LF E+ +GD + L+ C +G + +A ++ E M
Sbjct: 263 ------------LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
V P+ Y+ ++D LC VGKTK A L + + + P+ VTY +IN C+ + +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS-LDVVCYSVL 365
A+++ + MK+R +PD ITY +LL G + ++ +K + + DV+ Y+ L
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNAL 430
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+GL K + A+ +++ +++K D+VT +++ K G + +A EL ++S +
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
Query: 426 TPSSHIISAV 435
+S +A+
Sbjct: 491 VRNSDTYTAM 500
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 202/474 (42%), Gaps = 65/474 (13%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
+NI+ LC+ + A+ + E+R ++ D+ Y T+I+G+C L A + NEMK
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
G +VT+ +L C+ + A+ EM+ G+E + + +I G C G++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 146 EAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV---------- 191
+A F+ + ++ Y+ ++ G+C+ G K + I E
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCK-------LGQLKEASEIFEFMIERGVRPNV 317
Query: 192 --------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
G C V ++A +L + K + + ++ KLC G + A++++E
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHA-RSLFDSFVGRGFT-PDVVTYTTMINSYCRM 301
M+ P I Y+I+L LC G A + L+ +T PDV++Y +I+ C+
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK-------------------------- 335
N L +ALD++ + + D +T +LL + K
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 336 --------NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
L+V + M+ +E+ V Y+ L++ L K + + A RLFE+M
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
PD V++ MI K G +K A LL MS G++P S + LK
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 23/298 (7%)
Query: 160 EIYSAMVNGYCEASNNNNNYGDDKSPT-------------PISEVGYCKVDLVEK----- 201
+YS +VN + E + +D +P S + + +L+ K
Sbjct: 27 RVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSR 86
Query: 202 ----AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
A+ + ++ S LL + G A +L M + ++
Sbjct: 87 NHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
I+L LC + A SL PDV +Y T+I +C L++AL+L +MK
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G ++T+ +L+ +F A +D ++MK + D+V Y+ LI G +
Sbjct: 207 GCSWSLVTWGILI-DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
LF++++++G P +TY +I + K G +KEASE+ + M +G+ P+ + + +
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 74/150 (49%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+K+ +S + + Y + D CK G ++ A + ++RV + + Y L+ C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G+L A+ +F EM+ PD+V++N++ G + + + A + M G+ P+ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE 160
+ +I +G + EA + F+++ D E
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 213/454 (46%), Gaps = 16/454 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + F +S F + ++ + A+ K+ K D I E++ + I ++ Y LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C L A + +M G++PDIVT N L G C + A+ D+M G +
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCE------ASNN 175
P++ T +I GL K EA A +R+ + + Y A+VNG C+ A N
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 176 NNNYGDDKSPTPI---SEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
N K + S V CK + A LF E+ NKG + L++ LC
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + +S ++DA GK A L++ + R P++ T
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y+++IN +C ++ L EA + + M R+ P+V+TY L+ G F A +D ++R+M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING-FCKAKRVDKGMELFREM 419
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
Q + + V Y+ LI+G + + ++A +F+ M+ G+ P+ +TY ++ K G +
Sbjct: 420 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 479
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
+A + + + M P + + + + KA K
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 190/394 (48%), Gaps = 29/394 (7%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V N + + C ++ DA+ + +++ D +TTLI G L +A +
Sbjct: 147 DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALI 206
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ M +G +PD+VTY + G+C+ + +A+N ++ME+ +E N + +I+ LC
Sbjct: 207 DRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
+A F +++K V YS++++ C NYG S+ D
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLC-------NYGR------WSDASRLLSD 313
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
++E+ L + L+ G + KA KL E M +++P+ YS
Sbjct: 314 MIERKINPNLVTFSA-----------LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+++ C + + A+ + + + + P+VVTY T+IN +C+ + + ++LF++M +R
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G+ + +TYT L++G F+ A D +++ M + +++ Y++L++GL K
Sbjct: 423 GLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 481
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
A+ +FE + +EPD TY MI K G K
Sbjct: 482 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 145/320 (45%), Gaps = 23/320 (7%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ V + G D V Y V + LCK G D A+ + ++ I+ ++ Y+T+
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I C + DA +F EM+NKG +P+++TY+ L + +C A +M +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
PN T +I+ GK+ +AE + + +S++ YS+++NG+C + G
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCML----DRLG 375
Query: 181 DDKS-----------PTPISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+ K P ++ G+CK V+K ELF E+S +G + + L+
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
D A + + M S+ V P+ + Y+I+LD LC GK A +F+
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 286 PDVVTYTTMINSYCRMNSLK 305
PD+ TY MI C+ K
Sbjct: 496 PDIYTYNIMIEGMCKAGKWK 515
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 172/376 (45%), Gaps = 29/376 (7%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD V + E G D V + + L K +A+ + + + + D+ Y +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C +G+ A + N+M+ + ++V Y+ + +C+ A+N F EME+ GV
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
PN T+ +I LC+ G+ +A + + ++ + +SA+++ + +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG------- 337
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
K+ EK YE ++ S +I S L+ C++ +G+A ++
Sbjct: 338 --------------KLVKAEKLYEEMIKRSIDPNIFTYSS---LINGFCMLDRLGEAKQM 380
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
LE M + P+ + Y+ +++ C + LF RG + VTYTT+I+ + +
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQ 440
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
A +F+ M G+ P+++TY +LL G KN + ++ ++++ + D+
Sbjct: 441 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPDIY 499
Query: 361 CYSVLINGLMKTDNYE 376
Y+++I G+ K ++
Sbjct: 500 TYNIMIEGMCKAGKWK 515
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 184/379 (48%), Gaps = 39/379 (10%)
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA +F M P I+ ++ L + + + ++ + I+ ++ME G+ N T+ ++I
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 136 EGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
C ++ A A ++ + + ++++NG+C + IS+
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR-------------ISDA 167
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
V LV++ +E+ K D + L+ L L +A+ L++ M +P
Sbjct: 168 ----VALVDQ----MVEMGYKPDTVTFTT---LIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ Y V++ LC G T A +L + +VV Y+T+I+S C+ +AL+LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 312 QDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
+M+ +G++P+VITY+ L+ YG + +A+ L DM + +I+ ++V +S LI
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRL------LSDMIERKINPNLVTFSALI 330
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+ +K A +L+E+MI + ++P+ TY+ +I+ + + EA ++L+ M K
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL 390
Query: 427 PSSHIISAVNRSILKARKV 445
P+ + + KA++V
Sbjct: 391 PNVVTYNTLINGFCKAKRV 409
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 28/271 (10%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ D ++ F E + G+ + + Y+ + LC G+ DA + ++ + I+ ++ ++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
LI + +G L+ A ++ EM + P+I TY+ L G C D A + M
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNY 179
PN T+ +I G C +V + F + + + Y+ +++G+ +A + +N
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN-- 446
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
A +F ++ + G + LL LC G + KAM
Sbjct: 447 ----------------------AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
+ E ++ +EP Y+I+++ +C GK K
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 204/426 (47%), Gaps = 19/426 (4%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++DK E+ G + V Y V + +CK G+ A+E+ ++ +NI LD Y+ +I
Sbjct: 215 LIDKMVEY---GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G C G+L +AF +FNEM+ KG +I+TYN+L G C +M + P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC-----EASNNNN 177
N T ++I+ GK+ EAE + + + Y+++++G+C + +N
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 178 NYGDDKSPTP------ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
+ K P I GYCK + ++ ELF ++S +G +A + L+ C +
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + A +L + M S V P+ + Y I+LD LC G+++ A +F+ D+ Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+I+ C + + +A DLF + +G+KP V TY +++ G K L ++R M+
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK-GPLSEAELLFRKME 570
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ + D Y++LI + + +++L E++ G D T +I + L K
Sbjct: 571 EDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKK 630
Query: 412 EASELL 417
++L
Sbjct: 631 SFLDML 636
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 209/432 (48%), Gaps = 16/432 (3%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
+ ++ + + LC G+V +A+E+ + + D+ TL+ G CL G +A + ++
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M G +P+ VTY + +C++ + +A+ +ME ++ ++ + +II+GLC G
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------YGDDKSPTPISEV- 191
+ A FN ++ K + Y+ ++ G+C A ++ +P ++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 192 ---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
+ K + +A EL E+ ++G + L+ C + KA ++++ M S
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
+P+ ++I+++ C + LF RG D VTY T+I +C + L A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+LFQ+M R + P+++TY +LL G N + + I+ ++++++ LD+ Y+++I+G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE-IFEKIEKSKMELDIGIYNIIIHG 517
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ +DA LF + KG++P TY MI KKG + EA L +M G P
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 429 SHIISAVNRSIL 440
+ + R+ L
Sbjct: 578 GWTYNILIRAHL 589
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 194/423 (45%), Gaps = 21/423 (4%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D +D F++ S + ++ +F A+ K + D + + +++ +K I ++ + +I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C L AF ++ G++P+ +T++ L G+C A+ D M G +
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
P+ T ++ GLC GK EAEA L DK VE Y N YG
Sbjct: 191 PDLITINTLVNGLCLSGK--EAEAML--LIDKMVE-YGCQPNAV--------TYG----- 232
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
P+ V CK A EL ++ + ++ LC G + A L M
Sbjct: 233 -PVLNV-MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+ + I Y+I++ C+ G+ L + R P+VVT++ +I+S+ + L+
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
EA +L ++M RGI PD ITYT L+ G F LD N + M ++ +++L
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDG-FCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
ING K + +D + LF M +G+ D VTY +I + + G + A EL EM S+ +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 426 TPS 428
P+
Sbjct: 470 PPN 472
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 184/374 (49%), Gaps = 29/374 (7%)
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA +F +M + P ++ ++ L + + + + + + +ME G+ N T ++I
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
C K+ A + ++ E +S ++NG C +SE
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR-------------VSEA 177
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
++LV++ +E+ +K D+ + L+ LCL G +AM L++ M +P
Sbjct: 178 ----LELVDR----MVEMGHKPDLITINT---LVNGLCLSGKEAEAMLLIDKMVEYGCQP 226
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ + Y VL+ +C G+T A L R D V Y+ +I+ C+ SL A +LF
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+M+ +GI ++ITY +L+ G F NA D + RDM + +I+ +VV +SVLI+ +K
Sbjct: 287 NEMEMKGITTNIITYNILI-GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+A L ++MI +G+ PD +TYT +I + K+ + +A++++D M SKG P+
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 432 ISAVNRSILKARKV 445
+ + KA ++
Sbjct: 406 FNILINGYCKANRI 419
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 15/234 (6%)
Query: 220 SCFKLLTKLCLV-GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDS 278
+CF KLCL +GK +KL EP+ I +S +++ LC G+ A L D
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKL-------GYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL---YGSFK 335
V G PD++T T++N C EA+ L M G +P+ +TY +L S +
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
A A++++ R M++ I LD V YS++I+GL K + ++A LF +M KG+ + +
Sbjct: 244 TALAMELL----RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
TY +I + G + ++LL +M + + P+ S + S +K K++ E
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ F++ ++S M LD YNI+ +C KVDDA ++ L +K + +K Y
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+I G C +G L +A +F +M+ G PD TYN+L + +A ++ +E++
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 122 DGVEPNSTTHKMIIEGL 138
G +++T KM+I+ L
Sbjct: 607 CGFSVDASTIKMVIDML 623
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 214/428 (50%), Gaps = 36/428 (8%)
Query: 9 DKFKEFKESGMFLDGVAY----NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+ K F ES F G+A N + LCK GK D+A E+ ++ + I ++ Y +
Sbjct: 427 EALKLFDES--FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G+C Q N+ A +F+ + KG KP+ TY++L G RN + + A+ + M S +
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 125 EPNSTTHKMIIEGLCSVGKVGEA-EAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNY 179
E N ++ II GLC VG+ +A E N +++K + + Y+++++G+ +
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG------ 598
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
++D AYE E+ G + L+ LC + +A++
Sbjct: 599 ---------------EMDSAVAAYE---EMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+ + M++ V+ Y ++D C + A +LF + G P Y ++I+ +
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+ ++ ALDL++ M + G++ D+ TYT L+ G K+ L + + ++ +M+ + D
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN-LILASELYTEMQAVGLVPDE 759
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ Y+V++NGL K + +++FE+M + P+ + Y +I+ +Y++G + EA L DE
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 420 MSSKGMTP 427
M KG+ P
Sbjct: 820 MLDKGILP 827
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 227/493 (46%), Gaps = 64/493 (12%)
Query: 11 FKEFKESGMFLDGV-AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYC 69
+E KE + + Y V A K G +DDAI +++E+ I +++ T+LI G+C
Sbjct: 291 LREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHC 350
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+L+ A +F++M+ +G P+ VT++VL +N E A+ + +ME G+ P+
Sbjct: 351 KNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVF 410
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVE-------IYSAMVNGYCEASNNNNNY--- 179
II+G K EA F D+S E + + +++ C+ +
Sbjct: 411 HVHTIIQGWLKGQKHEEALKLF----DESFETGLANVFVCNTILSWLCKQGKTDEATELL 466
Query: 180 ----GDDKSPTPIS----EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
P +S +G+C+ ++ A +F + KG + + +L C
Sbjct: 467 SKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFR 525
Query: 232 G-DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL--------------- 275
D A++++ M S N+E + ++Y +++ LC VG+T AR L
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 276 ---------------------FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
++ G G +P+V+TYT+++N C+ N + +AL++ +M
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
K +G+K D+ Y L+ G F + ++ + ++ ++ + ++ Y+ LI+G N
Sbjct: 646 KNKGVKLDIPAYGALIDG-FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
A+ L++ M+ GL D TYT +I K G + ASEL EM + G+ P I +
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 435 VNRSILKARKVQF 447
+ + ++K QF
Sbjct: 765 IVNGL--SKKGQF 775
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 192/413 (46%), Gaps = 26/413 (6%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-YTTLIKGYCLQGNL 74
E G D + Y++ A CK + A + E++ K + + + YT++I QGN+
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
DA + +EM + G ++V L G C+N++ A+ FD+ME +G PNS T ++
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV--G 192
IE K GE E K++E Y M G S + + G
Sbjct: 381 IEWF---RKNGEME--------KALEFYKKM-----------EVLGLTPSVFHVHTIIQG 418
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
+ K E+A +LF E G +A C +L+ LC G +A +LL M S + P+
Sbjct: 419 WLKGQKHEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ Y+ V+ C AR +F + + +G P+ TY+ +I+ R + + AL++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M I+ + + Y ++ G K + +++ + + + Y+ +I+G K
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+ A+ +E+M G+ P+ +TYT +++ K M +A E+ DEM +KG+
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 159/338 (47%), Gaps = 29/338 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL-RVKNIDLDIKHYT 62
+ + ++ S + ++GV Y + + LCK+G+ A E+ + K + + Y
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
++I G+ +G + A + EM G P+++TY L G+C+N+ A+ DEM++
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNN 178
GV+ + + +I+G C + A A F+ L ++ S IY+++++G+ N
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF-------RN 701
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
G+ + A +L+ ++ G + L+ L G++ A
Sbjct: 702 LGN-----------------MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+L M+++ + P +I+Y+++++ L G+ +F+ TP+V+ Y +I +
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN 336
R +L EA L +M +GI PD T+ +L+ G N
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 208/482 (43%), Gaps = 69/482 (14%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDI----KH 60
S +VD K F G ++ A+N + +A K + D A+++ ++ ++LD+ +
Sbjct: 148 SKLVDSAKSF---GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM----LELDVIPFFPY 200
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ + +L +A +++ M G D VT +L R ++ A+
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYCEASNN 175
G EP+S + + ++ C + A + +++K S E Y++++ + N
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 176 NN--NYGDDKSPTPISE---------VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
++ D+ IS G+CK + + A LF ++ +G + L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQI-MYSIV------------------------ 259
+ G++ KA++ + M L + PS +++I+
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 260 ---------LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
L LC GKT A L RG P+VV+Y ++ +CR ++ A +
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
F ++ +G+KP+ TY++L+ G F+N AL+V+N M + I ++ V Y +IN
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN----HMTSSNIEVNGVVYQTIIN 556
Query: 368 GLMKTDNYEDAIRLFEDMID-KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
GL K A L +MI+ K L ++Y +I ++K+G M A +EM G++
Sbjct: 557 GLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 427 PS 428
P+
Sbjct: 617 PN 618
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 64/298 (21%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
MDS V ++E +G+ + + Y + + LCK ++D A+EMR+E++ K + LDI Y
Sbjct: 600 MDSAVA-AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
LI G+C + N+ A +F+E+ +G P YN L +G A++ + +M D
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN 178
G+ + T+ +I+GL G + A + +Q + IY+ +VNG
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNG---------- 768
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
LS KG K +
Sbjct: 769 ------------------------------LSKKGQFV-------------------KVV 779
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
K+ E M+ NV P+ ++Y+ V+ G A L D + +G PD T+ +++
Sbjct: 780 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 2/223 (0%)
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
+ L+ L + +A +L M ++ V+ + +++ A K A + + R
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI-KPDVITYTVLLYGSFKNAAALD 341
G PD + Y+ + + C+ L A L ++MK + + P TYT ++ S K D
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
I + +M IS++VV + LI G K ++ A+ LF+ M +G P+ VT++ +I
Sbjct: 323 AIR-LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
+ K G M++A E +M G+TPS + + + LK +K
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 206/435 (47%), Gaps = 26/435 (5%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E ++G+ L YN + + CK G + A E+ K ++ + YT+L+ GYC +G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ A +++EM KG P I T+ L +G+ R R A+ F+EM V+PN T+
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNY----GDDKS 184
++IEG C G + +A + +K + Y +++G C + G K
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 185 PTPISEV-------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDIGK 236
++E+ G+C+ +E+A + E+ +G + + C+ +L L D
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG-VDLDLVCYGVLIDGSLKHKDRKL 665
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
LL+ M ++P ++Y+ ++DA G K A ++D + G P+ VTYT +IN
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYT----VLLYGSFKNAAALDVINTIWRDMKQ 352
C+ + EA L M+ P+ +TY +L G A+++ N I + +
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+ Y++LI G + E+A L MI G+ PD +TYT MI+ ++ +K+
Sbjct: 786 -----NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 413 ASELLDEMSSKGMTP 427
A EL + M+ KG+ P
Sbjct: 841 AIELWNSMTEKGIRP 855
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 210/516 (40%), Gaps = 84/516 (16%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G+ D Y V +LC+L + A EM + D++I Y LI G C
Sbjct: 215 FNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCK 274
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM------ESD-- 122
+ + +A + ++ K KPD+VTY L G+C+ E + + DEM S+
Sbjct: 275 KQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAA 334
Query: 123 ---------------------------GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
GV PN + +I+ LC K EAE F+R+
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG 394
Query: 156 DKSVE----IYSAMVNGYCEASNNNN---------NYGDDKSPTPISEV--GYCKVDLVE 200
+ YS +++ +C + + G S P + + G+CK +
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
A E+ NK + L+ C G I KA++L M + PS ++ +L
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
L G + A LF+ P+ VTY MI YC + +A + ++M +GI
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 321 PDVITYTVLLYG----------------------------------SFKNAAALDVINTI 346
PD +Y L++G F L+ ++
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
++M Q + LD+VCY VLI+G +K + + L ++M D+GL+PD V YT MI K
Sbjct: 635 CQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
G KEA + D M ++G P+ +AV + KA
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 197/461 (42%), Gaps = 74/461 (16%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G+ + V Y+I+ D C+ GK+D A+ E+ + L + Y +LI G+C
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ A EM NK +P +VTY L G C + A+ + EM G+ P+ T
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
++ GL G + +A FN + + +V+ Y+ M+ GYCE GD
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEE-------GD----- 557
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+ KA+E E++ KG + S L+ LCL G +A ++ +
Sbjct: 558 ------------MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
N E ++I Y+ +L C GK + A S+ V RG D+V Y +I+ + K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 307 ALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
L ++M RG+KPD + YT ++ G FK A IW M + V
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG------IWDLMINEGCVPNEVT 719
Query: 362 YSVLINGLMKTDNYEDAIRLFEDM-----------------------------------I 386
Y+ +INGL K +A L M I
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
KGL + TY +I + ++G ++EASEL+ M G++P
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 28/332 (8%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S + KE E G+ D +Y + LC G+ +A + L N +L+ YT L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G+C +G L +A + EM +G D+V Y VL G ++ + ++ EM G+
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV---EI-YSAMVNGYCEASNNNNNYG 180
+P+ + +I+ G EA ++ + ++ E+ Y+A++NG C+A N
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
P+S V + Y FL++ KG++ D+ KA++L
Sbjct: 739 LCSKMQPVSSVPN------QVTYGCFLDILTKGEV-----------------DMQKAVEL 775
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ + + Y++++ C G+ + A L +G G +PD +TYTTMIN CR
Sbjct: 776 HNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
N +K+A++L+ M +GI+PD + Y L++G
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 176/389 (45%), Gaps = 16/389 (4%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
+++ + L+ G + A +FN+M + G +PD+ Y + +C + A
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYC-- 170
ME+ G + N + ++I+GLC KV EA L K V Y +V G C
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 171 -------EASNNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESC 221
E + S +S + G K +E+A L + + G
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 222 FKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG 281
L+ LC +A L + M + + P+ + YSI++D C GK A S V
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 282 RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD 341
G V Y ++IN +C+ + A +M + ++P V+TYT L+ G + + ++
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM-GGYCSKGKIN 489
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
++ +M I+ + ++ L++GL + DA++LF +M + ++P++VTY MI
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSH 430
Y ++G M +A E L EM+ KG+ P ++
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
P+V T + +++ + A++LF DM GI+PDV YT ++ S L
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIR-SLCELKDLSRAKE 248
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+ M+ T +++V Y+VLI+GL K +A+ + +D+ K L+PD VTY ++
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
K + E++DEM +PS +S++ + K K++
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Query: 24 VAYNIVFDALCKLGKVD--DAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
V Y D L K G+VD A+E+ + +K + + Y LI+G+C QG + +A +
Sbjct: 753 VTYGCFLDILTK-GEVDMQKAVELHNAI-LKGLLANTATYNMLIRGFCRQGRIEEASELI 810
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
M G PD +TY + +CR ++ + AI ++ M G+ P+ + +I G C
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 142 GKVGEA 147
G++G+A
Sbjct: 871 GEMGKA 876
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ + YN++ C+ G++++A E+ + + D YTT+I C + ++ A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKA 841
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
++N M KG +PD V YN L G C E A +EM G+ PN+ T +
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 202/444 (45%), Gaps = 20/444 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + V F + +E+G+ + V +N V D L G+ D+A +E++ + ++ + Y
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ L+KG + DA+++ EM KGF P+++ YN L AI D M S
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYC------- 170
G+ S+T+ +I+G C G+ AE + + +++++ C
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 171 ------EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
E N + G T IS G CK KA EL+ + NKG + + L
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
L LC G + +A ++ + + ++ Y+ ++ C K A D V RG
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
PD TY+ +I MN ++EA+ + D KR G+ PDV TY+V++ G K A +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK-AERTEEGQ 630
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+ +M + + V Y+ LI ++ A+ L EDM KG+ P+ TYT +I
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
++EA L +EM +G+ P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPN 714
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 202/436 (46%), Gaps = 20/436 (4%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
KE + G + + YN + D+ + G ++ AIE+++ + K + L Y TLIKGYC
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G +A + EM + GF + ++ + +C + A+ EM + P
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 131 HKMIIEGLCSVGKVGEA-EAHFNRLQDKSV---EIYSAMVNGYCEASNNNNNYGDDKS-- 184
+I GLC GK +A E F L V +A+++G CEA + + K
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 185 -----------PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
T IS G C +++A+ E+ +G + L+ L +
Sbjct: 533 GRGCVMDRVSYNTLIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +A++ + + + P YS+++D C +T+ + FD + + P+ V Y
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I +YCR L AL+L +DMK +GI P+ TYT L+ G + ++ ++ +M+
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISRVEEAKLLFEEMRME 709
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ +V Y+ LI+G K L +M K + P+K+TYT MI Y + G + EA
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 414 SELLDEMSSKGMTPSS 429
S LL+EM KG+ P S
Sbjct: 770 SRLLNEMREKGIVPDS 785
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 218/483 (45%), Gaps = 60/483 (12%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
+D F GMF NI+ +L + + E + + K + D+ +TT I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL--AAGVC-RNDEARVAINNFDE-MESD 122
+C G + +A +F++M+ G P++VT+N + G+C R DEA + F E M
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM----FKEKMVER 324
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNN- 177
G+EP T+ ++++GL ++G+A + K +V +Y+ +++ + EA + N
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 178 --------NYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
+ G + + + + GYCK + A L E+ + G + S ++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
LC A++ + M N+ P + + ++ LC GK A L+ F+ +GF D
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 288 V-----------------------------------VTYTTMINSYCRMNSLKEALDLFQ 312
V+Y T+I+ C L EA
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
+M +RG+KPD TY++L+ G F + I W D K+ + DV YSV+I+G K
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ E+ F++M+ K ++P+ V Y +I Y + G + A EL ++M KG++P+S
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 433 SAV 435
+++
Sbjct: 684 TSL 686
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 20/342 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S ++ + +F G +D N + LC+ GK+D+A +++E+ + +D Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TLI G C + L +AF +EM +G KPD TY++L G+ ++ AI +D+ +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+G+ P+ T+ ++I+G C + E + F+ + K+V+ + + N A
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA--------- 654
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
YC+ + A EL ++ +KG + L+ + ++ + +A L
Sbjct: 655 -----------YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E MR +EP+ Y+ ++D +G+ L + P+ +TYT MI Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
++ EA L +M+ +GI PD ITY +YG K L+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 159/399 (39%), Gaps = 61/399 (15%)
Query: 47 EELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN 106
EE+R K DL I+ Y T K + A +F + NKG P T N+L + R
Sbjct: 184 EEIRRKMSDLLIEVYCTQFK----RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 239
Query: 107 DEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMV 166
+E + FD + GV P+ V +++ +
Sbjct: 240 NEFQKCCEAFDVV-CKGVSPD-------------------------------VYLFTTAI 267
Query: 167 NGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
N +C+ VE+A +LF ++ G + ++
Sbjct: 268 NAFCKGGK------------------------VEEAVKLFSKMEEAGVAPNVVTFNTVID 303
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
L + G +A E M +EP+ I YSI++ L + A + +GF P
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V+ Y +I+S+ SL +A+++ M +G+ TY L+ G KN A D +
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA-DNAERL 422
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
++M +++ ++ +I L ++ A+R +M+ + + P T +IS K
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G +A EL + +KG + +A+ + +A K+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
++ K G+ + Y + + + +V++A + EE+R++ ++ ++ HYT LI GY
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G ++ + EM +K P+ +TY V+ G R+ A +EM G+ P+S T+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY 169
K I G G V EA + E Y+A++ G+
Sbjct: 789 KEFIYGYLKQGGVLEA------FKGSDEENYAAIIEGW 820
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E + G+ + Y + D KLG++ + E+ KN+ + YT +I GY
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
GN+ +A + NEM+ KG PD +TY G + A DE
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 202/444 (45%), Gaps = 20/444 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + V F + +E+G+ + V +N V D L G+ D+A +E++ + ++ + Y
Sbjct: 274 GKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ L+KG + DA+++ EM KGF P+++ YN L AI D M S
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYC------- 170
G+ S+T+ +I+G C G+ AE + + +++++ C
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 171 ------EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
E N + G T IS G CK KA EL+ + NKG + + L
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLIS--GLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
L LC G + +A ++ + + ++ Y+ ++ C K A D V RG
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
PD TY+ +I MN ++EA+ + D KR G+ PDV TY+V++ G K A +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK-AERTEEGQ 630
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+ +M + + V Y+ LI ++ A+ L EDM KG+ P+ TYT +I
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
++EA L +EM +G+ P+
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPN 714
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 202/436 (46%), Gaps = 20/436 (4%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
KE + G + + YN + D+ + G ++ AIE+++ + K + L Y TLIKGYC
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G +A + EM + GF + ++ + +C + A+ EM + P
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 131 HKMIIEGLCSVGKVGEA-EAHFNRLQDKSV---EIYSAMVNGYCEASNNNNNYGDDKS-- 184
+I GLC GK +A E F L V +A+++G CEA + + K
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 185 -----------PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
T IS G C +++A+ E+ +G + L+ L +
Sbjct: 533 GRGCVMDRVSYNTLIS--GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +A++ + + + P YS+++D C +T+ + FD + + P+ V Y
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I +YCR L AL+L +DMK +GI P+ TYT L+ G + ++ ++ +M+
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISRVEEAKLLFEEMRME 709
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ +V Y+ LI+G K L +M K + P+K+TYT MI Y + G + EA
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Query: 414 SELLDEMSSKGMTPSS 429
S LL+EM KG+ P S
Sbjct: 770 SRLLNEMREKGIVPDS 785
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 218/483 (45%), Gaps = 60/483 (12%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
+D F GMF NI+ +L + + E + + K + D+ +TT I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGVSPDVYLFTTAIN 268
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL--AAGVC-RNDEARVAINNFDE-MESD 122
+C G + +A +F++M+ G P++VT+N + G+C R DEA + F E M
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM----FKEKMVER 324
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNN- 177
G+EP T+ ++++GL ++G+A + K +V +Y+ +++ + EA + N
Sbjct: 325 GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKA 384
Query: 178 --------NYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
+ G + + + + GYCK + A L E+ + G + S ++
Sbjct: 385 IEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICL 444
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
LC A++ + M N+ P + + ++ LC GK A L+ F+ +GF D
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 288 V-----------------------------------VTYTTMINSYCRMNSLKEALDLFQ 312
V+Y T+I+ C L EA
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
+M +RG+KPD TY++L+ G F + I W D K+ + DV YSV+I+G K
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ-FWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ E+ F++M+ K ++P+ V Y +I Y + G + A EL ++M KG++P+S
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 433 SAV 435
+++
Sbjct: 684 TSL 686
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 20/342 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S ++ + +F G +D N + LC+ GK+D+A +++E+ + +D Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TLI G C + L +AF +EM +G KPD TY++L G+ ++ AI +D+ +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+G+ P+ T+ ++I+G C + E + F+ + K+V+ + + N A
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA--------- 654
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
YC+ + A EL ++ +KG + L+ + ++ + +A L
Sbjct: 655 -----------YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 703
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E MR +EP+ Y+ ++D +G+ L + P+ +TYT MI Y R
Sbjct: 704 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
++ EA L +M+ +GI PD ITY +YG K L+
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAF 805
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 159/399 (39%), Gaps = 61/399 (15%)
Query: 47 EELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN 106
EE+R K DL I+ Y T K + A +F + NKG P T N+L + R
Sbjct: 184 EEIRRKMSDLLIEVYCTQFK----RDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 239
Query: 107 DEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMV 166
+E + FD + GV P+ V +++ +
Sbjct: 240 NEFQKCCEAFDVV-CKGVSPD-------------------------------VYLFTTAI 267
Query: 167 NGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
N +C+ VE+A +LF ++ G + ++
Sbjct: 268 NAFCKGGK------------------------VEEAVKLFSKMEEAGVAPNVVTFNTVID 303
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
L + G +A E M +EP+ I YSI++ L + A + +GF P
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V+ Y +I+S+ SL +A+++ M +G+ TY L+ G KN A D +
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQA-DNAERL 422
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
++M +++ ++ +I L ++ A+R +M+ + + P T +IS K
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G +A EL + +KG + +A+ + +A K+
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKL 521
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
++ K G+ + Y + + + +V++A + EE+R++ ++ ++ HYT LI GY
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G ++ + EM +K P+ +TY V+ G R+ A +EM G+ P+S T+
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY 169
K I G G V EA + E Y+A++ G+
Sbjct: 789 KEFIYGYLKQGGVLEA------FKGSDEENYAAIIEGW 820
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E + G+ + Y + D KLG++ + E+ KN+ + YT +I GY
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
GN+ +A + NEM+ KG PD +TY G + A DE
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 204/441 (46%), Gaps = 24/441 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G SD+ + + K++G+ + V YN + CKLG + +A ++ E ++ N+ D+ Y
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTY 313
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LI G C G++ + + + MK+ +PD+VTYN L G + A ++ME+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD-----KSVEIYSAMVNGY------- 169
DGV+ N TH + ++ LC K L D + Y ++ Y
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 170 --CEASNNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
E G + ++ + CK +++A+ L +G I E + L+
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
+ KA+++ + M+ + + P+ ++ ++ LCH GKT+ A FD G
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALDV 342
PD T+ ++I YC+ +++A + + + + KPD T +LL G K AL+
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
NT+ E +D V Y+ +I+ K ++A L +M +KGLEPD+ TY IS
Sbjct: 614 FNTLIE-----EREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFIS 668
Query: 403 LYYKKGLMKEASELLDEMSSK 423
L + G + E ELL + S K
Sbjct: 669 LLMEDGKLSETDELLKKFSGK 689
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 195/437 (44%), Gaps = 74/437 (16%)
Query: 39 VDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFK--PDIVTY 96
+ A E+ +++ + L+++ + L+ GYCL+G L DA M M ++ FK PD VTY
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE-FKVNPDNVTY 243
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD 156
N + + + +M+ +G+ PN T+ ++ G C +G + EA ++
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 157 KSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNK 212
+V Y+ ++NG C A + ++L++ L L+
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREG-----------------LELMDAMKSLKLQPDVV 346
Query: 213 GDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK---- 268
+ CF+L L +A KL+E M + V+ +Q+ ++I L LC K
Sbjct: 347 TYNTLIDGCFELGLSL-------EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK-------- 320
T+ + L D GF+PD+VTY T+I +Y ++ L AL++ ++M ++GIK
Sbjct: 400 TRKVKELVDM---HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 321 ---------------------------PDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
D +TY L+ G F+ + +W +MK+
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE-MWDEMKKV 515
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+I+ V ++ LI GL E A+ F+++ + GL PD T+ +I Y K+G +++A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 414 SELLDEMSSKGMTPSSH 430
E +E P ++
Sbjct: 576 FEFYNESIKHSFKPDNY 592
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 154/364 (42%), Gaps = 24/364 (6%)
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEA---RVAINNFDEMES 121
+ Y +G A +F +M KP+++T N L G+ R + A FD+M
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL-QDKSVEIYSAMVNGYCEASNNNNNYG 180
GV N T +++ G C GK+ +A R+ + V + N +A +
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
D K EL L++ G + + L+ C +G + +A ++
Sbjct: 258 DLK--------------------ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+E M+ NV P Y+I+++ LC+ G + L D+ PDVVTY T+I+
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ EA L + M+ G+K + +T+ + L K V + + S D+V
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y LI +K + A+ + +M KG++ + +T ++ K+ + EA LL+
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 421 SSKG 424
+G
Sbjct: 478 HKRG 481
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
LL L+ PS+ ++ I L A H GK A +F + P+++T T++
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 300 RMNS---LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
R S + A ++F DM + G+ +V T+ VL+ G D + + R + + +++
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D V Y+ ++ + K D L DM GL P++VTY +++ Y K G +KEA ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 417 LDEMSSKGMTP 427
++ M + P
Sbjct: 298 VELMKQTNVLP 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKT---KHARSLFDSFVGRGFTPDVVTYTT 293
A+++ + M L ++P+ + + +L L + AR +FD V G + +V T+
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 294 MINSYCRMNSLKEALDLFQDM-KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
++N YC L++AL + + M + PD +TY +L K D + + DMK+
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSD-LKELLLDMKK 268
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+ + V Y+ L+ G K + ++A ++ E M + PD TY +I+ G M+E
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 413 ASELLDEMSSKGMTP 427
EL+D M S + P
Sbjct: 329 GLELMDAMKSLKLQP 343
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 213/462 (46%), Gaps = 52/462 (11%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
+AYN + L K+GKVD+A+++ EE++ K+ ++ Y LI C G L AF + +
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+ G P++ T N++ +C++ + A F+EM+ P+ T +I+GL VG+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 144 VGEAEAHFNRLQDKSV------------------------EIYSAMVNGYCEASNNN-NN 178
V +A + ++ D +IY M+N C N
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 179 YGD--------DKSPTPISEV-----------------GYCKVDLVEKAYELFLELSNKG 213
Y D +K E+ G K + YELF + +G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 214 DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHAR 273
+ + ++ C G + KA +LLE M++ EP+ + Y V+D L + + A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 274 SLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGS 333
LF+ + +VV Y+++I+ + ++ + EA + +++ ++G+ P++ T+ LL
Sbjct: 643 MLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Query: 334 FKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
K A ++ ++ MK+ + + + V Y +LINGL K + A +++M +G++P
Sbjct: 703 VK-AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS 761
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
++YT MIS K G + EA L D + G P S +A+
Sbjct: 762 TISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 215/452 (47%), Gaps = 21/452 (4%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-YTTLIKGYC 69
F E + +G+ D V Y + LCK ++D+A+EM E L KN + + Y T+I GY
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLE-KNRRVPCTYAYNTMIMGYG 319
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
G +A+ + + KG P ++ YN + + + + A+ F+EM+ D PN +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLS 378
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYG----- 180
T+ ++I+ LC GK+ A + +Q +V + MV+ C++ +
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 181 DDKSPTPISEVGYC-------KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
D K TP E+ +C KV V+ AY+++ ++ + L+ G
Sbjct: 439 DYKVCTP-DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
K+ + M + N P + + +D + G+ + R++F+ R F PD +Y+
Sbjct: 498 KEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSI 557
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I+ + E +LF MK +G D Y +++ G F ++ + +MK
Sbjct: 558 LIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG-FCKCGKVNKAYQLLEEMKTK 616
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
VV Y +I+GL K D ++A LFE+ K +E + V Y+ +I + K G + EA
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 414 SELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+L+E+ KG+TP+ + +++ +++KA ++
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 199/441 (45%), Gaps = 33/441 (7%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
DVV ++FK F AY + A + D + + ++++ + + +TTLI
Sbjct: 154 DVVQMMRKFKFRPAF---SAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLI 210
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+G+ +G + A + +EMK+ DIV YNV + + +A F E+E++G++
Sbjct: 211 RGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ-DKSVEI---YSAMVNGYCEASNNNNNYGD 181
P+ T+ +I LC ++ EA F L+ ++ V Y+ M+ GY A
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK------- 323
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
++AY L KG I + +LT L +G + +A+K+
Sbjct: 324 -----------------FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E M+ + P+ Y+I++D LC GK A L DS G P+V T M++ C+
Sbjct: 367 EEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
L EA +F++M + PD IT+ L+ G K +D ++ M ++ + +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGK-VGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y+ LI ED ++++DMI++ PD + +K G ++ + +E+
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 422 SKGMTPSSHIISAVNRSILKA 442
++ P + S + ++KA
Sbjct: 545 ARRFVPDARSYSILIHGLIKA 565
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 183/404 (45%), Gaps = 21/404 (5%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D + + + D L K+G+VDDA ++ E++ + + YT+LIK + G D ++
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+M N+ PD+ N + + E F+E+++ P++ ++ ++I GL
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
G +++ E++ +M C N D G+CK V K
Sbjct: 566 G-----------FANETYELFYSMKEQGCVLDTRAYNIVID---------GFCKCGKVNK 605
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
AY+L E+ KG + ++ L + + +A L E +S +E + ++YS ++D
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
VG+ A + + + +G TP++ T+ +++++ + + EAL FQ MK P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ +TY +L+ G K + W++M++ + + Y+ +I+GL K N +A L
Sbjct: 726 NQVTYGILINGLCK-VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
F+ G PD Y MI +A L +E +G+
Sbjct: 785 FDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 160/356 (44%), Gaps = 29/356 (8%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N D + K G+ + M EE++ + D + Y+ LI G G + + +F MK
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+G D YN++ G C+ + A +EM++ G EP T+ +I+GL + ++ E
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDE 640
Query: 147 AEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
A F + K +E IYS++++G+ KV +++A
Sbjct: 641 AYMLFEEAKSKRIELNVVIYSSLIDGFG------------------------KVGRIDEA 676
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
Y + EL KG + LL L +I +A+ ++M+ L P+Q+ Y I+++
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
LC V K A + +G P ++YTTMI+ + ++ EA LF K G PD
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
Y ++ G A+D +++ + ++ + + VL++ L K D E A
Sbjct: 797 SACYNAMIEGLSNGNRAMDAF-SLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 20/326 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E K D +Y+I+ L K G ++ E+ ++ + LD + Y +I G+C
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + A+ + EMK KGF+P +VTY + G+ + D A F+E +S +E N
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ +I+G VG++ EA L K + N +A
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA------------------ 701
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
K + + +A F + + + L+ LC V KA + M+ ++
Sbjct: 702 --LVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
PS I Y+ ++ L G A +LFD F G PD Y MI N +A L
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSL 819
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKN 336
F++ +RRG+ T VLL KN
Sbjct: 820 FEETRRRGLPIHNKTCVVLLDTLHKN 845
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 189/434 (43%), Gaps = 19/434 (4%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN-LIDAFYMFNE 83
+YN + + + D ++ E+ V + ++ G C++ N L + + +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKANKLREGYDVVQM 158
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+ F+P Y L + + + + F +M+ G EP +I G G+
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY-------GDDKSP---TPIS 189
V A + + ++ S++ +Y+ ++ + + + + + P T S
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 190 EVG-YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
+G CK + +++A E+F L + + ++ G +A LLE R+
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
PS I Y+ +L L +GK A +F+ + + P++ TY +I+ CR L A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+L M++ G+ P+V T +++ + LD ++ +M + D + + LI+G
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMV-DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L K +DA +++E M+D + + YT +I ++ G ++ ++ +M ++ +P
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 429 SHIISAVNRSILKA 442
+++ + KA
Sbjct: 517 LQLLNTYMDCMFKA 530
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 2/214 (0%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + A+ LL+ M+S +++ ++Y++ +D+ VGK A F G PD VTY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
T+MI C+ N L EA+++F+ +++ P Y ++ G + +A D ++ +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG-YGSAGKFDEAYSLLERQR 335
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
V+ Y+ ++ L K ++A+++FE+M K P+ TY +I + + G +
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLD 394
Query: 412 EASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
A EL D M G+ P+ ++ + + K++K+
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 198/421 (47%), Gaps = 21/421 (4%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YNI+ + C+ ++ A+ + ++ + I ++L+ GYC + DA + ++M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G++PD +T+ L G+ +++A A+ D M G +PN T+ +++ GLC G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
A N+++ +E + N ++ CK V+ A
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDS--------------------LCKYRHVDDALN 206
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
LF E+ KG + L++ LC G A +LL M + P+ + ++ ++DA
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
GK A L D + R PD+ TY ++IN +C + L +A +F+ M + PD+
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY L+ G K+ D ++R+M + D V Y+ LI GL + ++A ++F+
Sbjct: 327 TYNTLIKGFCKSKRVEDG-TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M+ G+ PD +TY+ ++ G +++A E+ D M + +I + + + KA K
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 445 V 445
V
Sbjct: 446 V 446
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 198/437 (45%), Gaps = 21/437 (4%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD V + E G D + + + L K +A+ + + + + ++ Y +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C +G++ AF + N+M+ + D+V +N + +C+ A+N F EME+ G+
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 216
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
PN T+ +I LCS G+ +A + + +K + N +A + +
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE--- 273
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
EK ++ ++ S DI S L+ C+ + KA ++ E M
Sbjct: 274 --------------AEKLHDDMIKRSIDPDIFTYNS---LINGFCMHDRLDKAKQMFEFM 316
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
S + P Y+ ++ C + + LF RG D VTYTT+I
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
A +F+ M G+ PD++TY++LL G N L+ ++ M+++EI LD+ Y+
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDG-LCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
+I G+ K +D LF + KG++P+ VTY MIS K L++EA LL +M G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 425 MTPSSHIISAVNRSILK 441
P S + + R+ L+
Sbjct: 496 PLPDSGTYNTLIRAHLR 512
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 188/416 (45%), Gaps = 55/416 (13%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V Y +V + LCK G +D A + ++ I+ D+ + T+I C ++ DA +F E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+ KG +P++VTY+ L + +C A +M + PN T +I+ GK
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYC------------EASNNNNNYGD-DKSPT 186
EAE + + +S++ Y++++NG+C E + + + D D T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
I G+CK VE ELF E+S++G + + L+ L GD A K+ + M S
Sbjct: 331 LIK--GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
V P + YSI+LD LC+ GK + A +FD D+ YTTMI C+ + +
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 448
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
DLF + +G+KP+V+T Y+ +I
Sbjct: 449 GWDLFCSLSLKGVKPNVVT------------------------------------YNTMI 472
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+GL ++A L + M + G PD TY +I + + G ++EL+ EM S
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 35/371 (9%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D ++ FKE + G+ + V Y+ + LC G+ DA ++ ++ K I+ ++ + LI
Sbjct: 203 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+ +G ++A + ++M + PDI TYN L G C +D A F+ M S
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGD 181
P+ T+ +I+G C +V + F + + + Y+ ++ G + +N
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN---- 378
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
A ++F ++ + G + LL LC G + KA+++
Sbjct: 379 --------------------AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M+ ++ +Y+ +++ +C GK LF S +G P+VVTY TMI+ C
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLD 358
L+EA L + MK G PD TY L+ ++ AA+ ++I R+M+ D
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI----REMRSCRFVGD 534
Query: 359 VVCYSVLINGL 369
++ N L
Sbjct: 535 ASTIGLVANML 545
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 180/365 (49%), Gaps = 39/365 (10%)
Query: 91 PDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
P I +N L + + + + + I+ ++M+ G+ N T+ ++I C ++ A A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 151 FNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
++ + S+ S+++NGYC IS+ V LV++
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKR-------------ISDA----VALVDQ----M 106
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
+E+ + D + L+ L L +A+ L++ M +P+ + Y +V++ LC
Sbjct: 107 VEMGYRPDTITFTT---LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G A +L + DVV + T+I+S C+ + +AL+LF++M+ +GI+P+V+TY
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 327 TVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ L+ YG + +A+ L DM + +I+ ++V ++ LI+ +K + +A +L
Sbjct: 224 SSLISCLCSYGRWSDASQL------LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
+DMI + ++PD TY +I+ + + +A ++ + M SK P + + + K
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 442 ARKVQ 446
+++V+
Sbjct: 338 SKRVE 342
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 212/434 (48%), Gaps = 29/434 (6%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S D + E + G LD AYN++ DAL K + A ++ E+++ ++ D YT +
Sbjct: 220 SKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEYTYTIM 276
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I+ G +A +FNEM +G ++V YN L + + AI F M G
Sbjct: 277 IRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGC 336
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE-IYSAMVNGYCEASNNNNNYGDDK 183
PN T+ +++ L + G++ + + + IYS +V
Sbjct: 337 RPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRT--------------- 381
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+S++G+ V +A+ LF ++ + + +S +L LC G +A+++L
Sbjct: 382 ----LSKLGH-----VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
+ V +MY+ V AL + + H LF+ G +PD+ TY +I S+ R+
Sbjct: 433 IHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGE 492
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+ EA+++F++++R KPD+I+Y L+ KN +D + +++M++ ++ DVV YS
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKN-GDVDEAHVRFKEMQEKGLNPDVVTYS 551
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
L+ KT+ E A LFE+M+ KG +P+ VTY ++ K G EA +L +M +
Sbjct: 552 TLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
Query: 424 GMTPSSHIISAVNR 437
G+TP S + + R
Sbjct: 612 GLTPDSITYTVLER 625
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 180/411 (43%), Gaps = 50/411 (12%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+ D F++ K+ D Y I+ + ++GK D+A+ + E+ + + L++
Sbjct: 248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG 307
Query: 61 YTTLIKGYCLQGNLID-AFYMFNEMKNKGFKPDIVTYNVL-----AAGVCRNDEARVAIN 114
Y TL++ +G ++D A +F+ M G +P+ TY++L A G + V I+
Sbjct: 308 YNTLMQ-VLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEIS 366
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYC 170
+ G+ + ++ L +G V EA F + V + Y +M+ C
Sbjct: 367 K--RYMTQGI------YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLC 418
Query: 171 EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG---DIAKEESCFKLLTK 227
A +A E+ ++ KG D + F L K
Sbjct: 419 GAGK------------------------TIEAIEMLSKIHEKGVVTDTMMYNTVFSALGK 454
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
L I L E M+ P Y+I++ + VG+ A ++F+ PD
Sbjct: 455 L---KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPD 511
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
+++Y ++IN + + EA F++M+ +G+ PDV+TY+ L+ F +++ +++
Sbjct: 512 IISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLM-ECFGKTERVEMAYSLF 570
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
+M ++V Y++L++ L K +A+ L+ M +GL PD +TYT
Sbjct: 571 EEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 169/398 (42%), Gaps = 29/398 (7%)
Query: 51 VKNIDLDIKHYT--TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDE 108
VK DL + +T L++ Y + AF ++ E++ G K DI YN+L + ++++
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK 253
Query: 109 ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNG 168
A F++M+ + T+ ++I + +GK EA FN + + + + N
Sbjct: 254 A---CQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 169 YCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL 228
+ K +V+KA ++F + G E + LL L
Sbjct: 311 LMQV--------------------LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLL 350
Query: 229 CLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV 288
G + + ++E + +Q +YS ++ L +G A LF +
Sbjct: 351 VAEGQLVRLDGVVEISKRYM---TQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGER 407
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
+Y +M+ S C EA+++ + +G+ D + Y + + + + I+ ++
Sbjct: 408 DSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV-FSALGKLKQISHIHDLFE 466
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
MK+ S D+ Y++LI + ++AI +FE++ +PD ++Y +I+ K G
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+ EA EM KG+ P S + K +V+
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G + ++ F+E + S D ++YN + + L K G VD+A +E++ K ++ D+
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y+TL++ + + A+ +F EM KG +P+IVTYN+L + +N A++ + +M+
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Query: 121 SDGVEPNSTTHKMIIEGLCSV 141
G+ P+S T+ ++E L SV
Sbjct: 610 QQGLTPDSITYT-VLERLQSV 629
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 204/437 (46%), Gaps = 19/437 (4%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+ G+ + YN+ LC+ G++D A+ M L + D+ Y LI G C
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
+A +M N+G +PD TYN L AG C+ ++A + +G P+ T++ +I
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC------EASNNNNNYGDDKSP 185
+GLC G+ A A FN K ++ +Y+ ++ G EA+ N +K
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGL 422
Query: 186 TPISEV------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
P + G CK+ V A L + +KG + L+ + A++
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+L+ M V+P Y+ +L+ LC K + + + V +G P++ T+ ++ S C
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT-EISLD 358
R L EAL L ++MK + + PD +T+ L+ G KN LD T++R M++ ++S
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD-LDGAYTLFRKMEEAYKVSSS 601
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
Y+++I+ + N A +LF++M+D+ L PD TY M+ + K G + + L
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 419 EMSSKGMTPSSHIISAV 435
EM G PS + V
Sbjct: 662 EMMENGFIPSLTTLGRV 678
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 201/437 (45%), Gaps = 22/437 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ ++ G+ D ++ I + CK + A+ + + + ++++ Y T++ G+
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ + + +F +M G + T+N L +C+ + + D++ GV PN T
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNN----------- 175
+ + I+GLC G++ A L ++ V Y+ ++ G C+ S
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
N D GYCK +V+ A + + G + + + L+ LC G+
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A+ L ++P+ I+Y+ ++ L + G A L + +G P+V T+ ++
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG---SFKNAAALDVINTIWRDMKQ 352
N C+M + +A L + M +G PD+ T+ +L++G K AL++++ M
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV----MLD 489
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+ DV Y+ L+NGL KT +ED + ++ M++KG P+ T+ ++ + + E
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 413 ASELLDEMSSKGMTPSS 429
A LL+EM +K + P +
Sbjct: 550 ALGLLEEMKNKSVNPDA 566
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 180/429 (41%), Gaps = 24/429 (5%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELR--VKNIDLDIKHYTTLIKGYCLQG 72
KE G Y V + L GK + E+ ++R V N L+ Y +K Y +G
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE-GVYVGAMKNYGRKG 90
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ +A +F M +P + +YN + + + + A + M G+ P+ +
Sbjct: 91 KVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFT 150
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVG 192
+ ++ C + A N + + E+ V YC G
Sbjct: 151 IRMKSFCKTSRPHAALRLLNNMSSQGCEMN---VVAYCTVVG-----------------G 190
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
+ + + + YELF ++ G + KLL LC GD+ + KLL+ + V P+
Sbjct: 191 FYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN 250
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
Y++ + LC G+ A + + +G PDV+TY +I C+ + +EA
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLG 310
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M G++PD TY L+ G K + + I D D Y LI+GL
Sbjct: 311 KMVNEGLEPDSYTYNTLIAGYCK-GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
A+ LF + + KG++P+ + Y +I +G++ EA++L +EMS KG+ P
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 433 SAVNRSILK 441
+ + + K
Sbjct: 430 NILVNGLCK 438
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 187/459 (40%), Gaps = 51/459 (11%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTY 96
GKV +A+ + E + + + + Y ++ G A ++ M+++G PD+ ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG------------------- 137
+ C+ A+ + M S G E N + ++ G
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 138 ----------------LCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
LC G V E E +++ + V Y+ + G C+ +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 178 NYG-----DDKSPTP--ISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
++ P P I+ G CK ++A ++ N+G + L+
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
C G + A +++ P Q Y ++D LCH G+T A +LF+ +G+G P
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V+ Y T+I + EA L +M +G+ P+V T+ +L+ G K D + +
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA-DGL 448
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ M D+ +++LI+G E+A+ + + M+D G++PD TY +++ K
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
++ E M KG P+ + + S+ + RK+
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 139/332 (41%), Gaps = 37/332 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + E E G+ + +NI+ + LCK+G V DA + + + K DI +
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LI GY Q + +A + + M + G PD+ TYN L G+C+ + + + M
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
G PN T +++E LC K+ EA +++KSV + +++G+C+ +
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD--- 581
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT-----KLCLVG 232
++ AY LF ++ ++ + ++ KL
Sbjct: 582 ---------------------LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL---- 616
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
++ A KL + M + P Y +++D C G + GF P + T
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
+IN C + + EA + M ++G+ P+ +
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 112/252 (44%), Gaps = 34/252 (13%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + +A+ + E M + EP+ Y+ ++ L G A ++ RG TPDV ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN--------------- 336
T + S+C+ + AL L +M +G + +V+ Y ++ G ++
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 337 ---AAALDVINTIWR------DMKQTEISLDVV----------CYSVLINGLMKTDNYED 377
+ L N + R D+K+ E LD V Y++ I GL + +
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A+R+ +I++G +PD +TY ++I K +EA L +M ++G+ P S+ + +
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 438 SILKARKVQFHE 449
K VQ E
Sbjct: 330 GYCKGGMVQLAE 341
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 22/288 (7%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG SD K G F D +NI+ K+++A+E+ + + +D D+
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +L+ G C D + M KG P++ T+N+L +CR + A+ +EM+
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD-----KSVEIYSAMVNGYCEASN- 174
+ V P++ T +I+G C G + A F ++++ S Y+ +++ + E N
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 175 ----------NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ G D + G+CK V Y+ LE+ G I + ++
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
+ LC+ + +A ++ M + P + + +C V K + A
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV------NTICDVDKKEVA 720
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 193/404 (47%), Gaps = 24/404 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ ++ +E + LD V Y+I+ D LCK G +D+A + E+ +K DI Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TTLI+G+C G D + +M + PD+V ++ L + + R A EM
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P++ T+ +I+G C ++ DK+ + MV+ C + N
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQL-----------DKANHMLDLMVSKGCGPNIRTFN--- 391
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
I GYCK +L++ ELF ++S +G +A + L+ C +G + A +L
Sbjct: 392 ------ILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ M S V P + Y I+LD LC G+ + A +F+ D+ Y +I+ C
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNA 505
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
+ + +A DLF + +G+KPDV TY +++ G K +L + ++R M++ S +
Sbjct: 506 SKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK-GSLSEADLLFRKMEEDGHSPNGCT 564
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVT---YTDMIS 402
Y++LI + + + +L E++ G D T DM+S
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 200/436 (45%), Gaps = 34/436 (7%)
Query: 19 MFLDGVAYN-----IVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN 73
M L G+A+N I+ + C+ K+ A ++ + D ++TLI G CL+G
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
+ +A + + M G KP ++T N L G+C N + A+ D M G +PN T+
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+++ +C G+ A +++++ +++ YS +++G C+ + +N
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN------------ 265
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
A+ LF E+ KG A L+ C G KLL M +
Sbjct: 266 ------------AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P + +S ++D GK + A L + RG +PD VTYT++I+ +C+ N L +A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+ M +G P++ T+ +L+ G K A +D ++R M + D V Y+ LI G
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCK-ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ E A LF++M+ + + PD V+Y ++ G ++A E+ +++ M
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 430 HIISAVNRSILKARKV 445
I + + + A KV
Sbjct: 493 GIYNIIIHGMCNASKV 508
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 184/426 (43%), Gaps = 56/426 (13%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ D VD F+E S + ++ +F + + + D +++ +++ +K I ++ +
Sbjct: 53 EDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
+I C L AF ++ G++PD VT++ L G+C A+ D M G
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK 183
+P T ++ GLC GKV +A +R+ + + N YG
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ-------------PNEVTYG--- 216
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
P+ +V +C G AM+LL
Sbjct: 217 ---PVLKV------------------------------------MCKSGQTALAMELLRK 237
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M ++ + YSI++D LC G +A +LF+ +GF D++ YTT+I +C
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+ L +DM +R I PDV+ ++ L+ F L + ++M Q IS D V Y+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALI-DCFVKEGKLREAEELHKEMIQRGISPDTVTYT 356
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
LI+G K + + A + + M+ KG P+ T+ +I+ Y K L+ + EL +MS +
Sbjct: 357 SLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLR 416
Query: 424 GMTPSS 429
G+ +
Sbjct: 417 GVVADT 422
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
L EP + +S +++ LC G+ A L D V G P ++T ++N C + +
Sbjct: 136 LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD 195
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLY---GSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
A+ L M G +P+ +TY +L S + A A++++ R M++ +I LD V YS
Sbjct: 196 AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL----RKMEERKIKLDAVKYS 251
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++I+GL K + ++A LF +M KG + D + YT +I + G + ++LL +M +
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 424 GMTPSSHIISAVNRSILKARKVQFHE 449
+TP SA+ +K K++ E
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAE 337
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 194/441 (43%), Gaps = 16/441 (3%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D F E +S V + V + K+ K D I + ++ I D+ +T LI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C L A + +M GF+P IVT L G C+ + + A++ D M+ G
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS- 184
PN + +I GLC + A F ++ K + + N +N+ + D
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 185 ----------PTPISEVG----YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
P I + K + +A L+ E+ + + + L+ C+
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G +G A + + M S P + Y+ ++ C + + LF +G D T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y T+I+ YC+ L A +F M G+ PD++TY +LL N ++ + D+
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL-DCLCNNGKIEKALVMVEDL 420
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+++E+ +D++ Y+++I GL +TD ++A LF + KG++PD + Y MIS +KGL
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 411 KEASELLDEMSSKGMTPSSHI 431
+EA +L M G PS I
Sbjct: 481 READKLCRRMKEDGFMPSERI 501
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 28/339 (8%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
++ ++ F ++ G+ D V YN + L G+ DA + ++ + ID ++ +T L
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I + +GNL++A ++ EM + P++ TYN L G C + A FD M S G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
P+ T+ +I G C +V + F + + + Y+ +++GYC+A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG------- 373
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
K+++ +K + ++ DI LL LC G I KA+ +
Sbjct: 374 --------------KLNVAQKVFNRMVDCGVSPDIVTYNI---LLDCLCNNGKIEKALVM 416
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+E ++ ++ I Y+I++ LC K K A LF S +G PD + Y TMI+ CR
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
+EA L + MK G P Y L + + +A
Sbjct: 477 KGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSA 515
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 1/203 (0%)
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M L PS + +L+ C + + A SL DS G GF P+VV Y T+IN C+
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
L AL++F M+++GI+ D +TY L+ G N+ + RDM + +I +V+ ++
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISG-LSNSGRWTDAARLLRDMVKRKIDPNVIFFT 258
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
LI+ +K N +A L+++MI + + P+ TY +I+ + G + +A + D M SK
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 424 GMTPSSHIISAVNRSILKARKVQ 446
G P + + K+++V+
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVE 341
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 34/211 (16%)
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
H K A SLF + P +V +T ++ +MN + L+ M+ GI D+
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMK-----------------------QTEISL---- 357
++T+L++ + + + + + MK Q +SL
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 358 -------DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+VV Y+ +INGL K + +A+ +F M KG+ D VTY +IS G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILK 441
+A+ LL +M + + P+ +A+ + +K
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 218/518 (42%), Gaps = 83/518 (16%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D VD F + +S F V +N + A+ K+ K + I + E+++ I D+ Y+ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+C + L A + +M G++PDIVT + L G C + A+ D+M G +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN------- 174
P++ T +I GL K EA A +++ + + Y +VNG C+ +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 175 -NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
N K+ I CK VE A +LF E+ KG + L+ LC
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
G A +LL M + P+ + ++ ++DA GK A L + + R PD +T
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 291 YTTMINSYCRMNSLKEA-----------------------------------LDLFQDMK 315
Y +IN +C N L EA ++LF++M
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+RG+ + +TYT ++ G F+ A D +++ M + D++ YS+L++GL
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQ-AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 376 EDAIRLF-------------------EDMIDKG-------------LEPDKVTYTDMISL 403
+ A+ +F E M G ++PD VTY MIS
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
K L++EA +L +M G P+S + + R+ L+
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLR 582
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 177/416 (42%), Gaps = 56/416 (13%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ V + + G D V Y V + LCK G +D A+ + ++ I ++ + T+
Sbjct: 205 SEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I C ++ A +F EM+ KG +P++VTYN L +C A M +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC-----EASNN 175
PN T +I+ GK+ EAE + +S++ Y+ ++NG+C + +
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 176 NNNYGDDKSPTPISEV------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+ K P + G+CK VE ELF E+S +G + + ++
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIM-YSIVLDALCHVGKTKHARSLF------------ 276
GD A + + M S N P+ IM YSI+L LC GK A +F
Sbjct: 445 QAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNI 503
Query: 277 --------------------DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
D F PDVVTY TMI+ C L+EA DLF+ MK
Sbjct: 504 FIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 317 RGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
G P+ TY L+ + ++ AA+ ++I ++M+ + D S++ N L
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELI----KEMRSSGFVGDASTISLVTNML 615
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 193/490 (39%), Gaps = 91/490 (18%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD V + E G D + + L K +A+ + +++ + D+ Y T+
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C +G++ A + N+M+ K ++V +N + +C+ VA++ F EME+ G+
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAE---------------AHFNRLQD------KSVE--- 160
PN T+ +I LC+ G+ +A FN L D K VE
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 161 ---------------IYSAMVNGYC-----EASNNNNNYGDDKSPTPISEV------GYC 194
Y+ ++NG+C + + + K P + G+C
Sbjct: 350 LHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K VE ELF E+S +G + + ++ GD A + + M S N P+ I
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDI 468
Query: 255 M-YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
M YSI+L LC GK A +F ++ Y TMI C+ + EA DLF
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
+ IKPDV+T Y+ +I+GL
Sbjct: 529 L---SIKPDVVT------------------------------------YNTMISGLCSKR 549
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIIS 433
++A LF M + G P+ TY +I + ++EL+ EM S G + IS
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 434 AVNRSILKAR 443
V + R
Sbjct: 610 LVTNMLHDGR 619
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 185/381 (48%), Gaps = 41/381 (10%)
Query: 76 DAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
DA +F +M K++ F P IV +N L + V + ++ + I+ ++M++ G+ + T+ +
Sbjct: 66 DAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 135 IEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I C ++ A A ++ + + S+++NGYC + IS+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR-------------ISD 171
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
V LV++ +E+ K D + L+ L L +A+ L++ M +
Sbjct: 172 A----VALVDQ----MVEMGYKPDTFTFTT---LIHGLFLHNKASEAVALVDQMVQRGCQ 220
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P + Y V++ LC G A +L + +VV + T+I+S C+ ++ A+DL
Sbjct: 221 PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
Query: 311 FQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
F +M+ +GI+P+V+TY L+ YG + +A+ L +M + +I+ +VV ++ L
Sbjct: 281 FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL------LSNMLEKKINPNVVTFNAL 334
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+ K +A +L E+MI + ++PD +TY +I+ + + EA ++ M SK
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 426 TPSSHIISAVNRSILKARKVQ 446
P+ + + K ++V+
Sbjct: 395 LPNIQTYNTLINGFCKCKRVE 415
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
I+ + L + K A LF V P +V + ++++ +MN + + L + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
GI D+ TY++ + F + L + + M + D+V S L+NG + D
Sbjct: 113 GISHDLYTYSIFI-NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
A+ L + M++ G +PD T+T +I + EA L+D+M +G P
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 189/443 (42%), Gaps = 83/443 (18%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D +D F S F V N V ++ + D AI + ++ ++ I L+I + LI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRND---EARV----------- 111
K +C L + F ++ GF+PD+VT+N L G+C D EA
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 112 -AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMV 166
A+ FD+M G+ P T +I GLC G+V EA A N++ K + I Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 167 NGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
NG C+ GD KS
Sbjct: 269 NGMCKM-------GDTKS------------------------------------------ 279
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
A+ LL M +++P ++YS ++D LC G A+ LF + +G P
Sbjct: 280 ----------ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V TY MI+ +C +A L +DM R I PDV+T+ L+ S K + +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA-EKL 388
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+M I D V Y+ +I G K + ++DA +F+ M PD VT+ +I +Y +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCR 444
Query: 407 KGLMKEASELLDEMSSKGMTPSS 429
+ E +LL E+S +G+ ++
Sbjct: 445 AKRVDEGMQLLREISRRGLVANT 467
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 25/440 (5%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ V F + E G+ + +N + + LC G+V +A + ++ K + +D+ Y T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G+ A + ++M+ KPD+V Y+ + +C++ A F EM G+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
PN T+ +I+G CS G+ +A+ + ++ + N AS
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS------------ 376
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
V K+ EK + L D S ++ C A + + M
Sbjct: 377 -----VKEGKLFEAEKLCDEMLHRCIFPDTVTYNS---MIYGFCKHNRFDDAKHMFDLMA 428
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S P + ++ ++D C + L RG + TY T+I+ +C +++L
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
A DLFQ+M G+ PD IT +LLYG +N + + ++ ++ ++I LD V Y+++
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNII 543
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+G+ K ++A LF + G+EPD TY MIS + K + +A+ L +M G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 426 TPSSHIISAVNRSILKARKV 445
P + + + R LKA ++
Sbjct: 604 EPDNSTYNTLIRGCLKAGEI 623
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 185/397 (46%), Gaps = 16/397 (4%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG ++ + +E+ + D V Y+ + D LCK G DA + E+ K I ++
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +I G+C G DA + +M + PD++T+N L + + + A DEM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN---- 176
+ P++ T+ +I G C + +A+ F+ + V ++ +++ YC A +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 177 -----NNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+ G + T + + G+C+VD + A +LF E+ + G +C LL C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
+ +A++L E ++ ++ + Y+I++ +C K A LF S G PDV
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
TY MI+ +C +++ +A LF MK G +PD TY L+ G K A +D + +
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK-AGEIDKSIELISE 632
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
M+ S D +++ + + TD D + F DM+
Sbjct: 633 MRSNGFSGDA--FTIKMVADLITDGRLD--KSFSDML 665
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 189/443 (42%), Gaps = 83/443 (18%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D +D F S F V N V ++ + D AI + ++ ++ I L+I + LI
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRND---EARV----------- 111
K +C L + F ++ GF+PD+VT+N L G+C D EA
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 112 -AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMV 166
A+ FD+M G+ P T +I GLC G+V EA A N++ K + I Y +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 167 NGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
NG C+ GD KS
Sbjct: 269 NGMCKM-------GDTKS------------------------------------------ 279
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
A+ LL M +++P ++YS ++D LC G A+ LF + +G P
Sbjct: 280 ----------ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V TY MI+ +C +A L +DM R I PDV+T+ L+ S K + +
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA-EKL 388
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+M I D V Y+ +I G K + ++DA +F+ M PD VT+ +I +Y +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 407 KGLMKEASELLDEMSSKGMTPSS 429
+ E +LL E+S +G+ ++
Sbjct: 445 AKRVDEGMQLLREISRRGLVANT 467
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 25/440 (5%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ V F + E G+ + +N + + LC G+V +A + ++ K + +D+ Y T++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G+ A + ++M+ KPD+V Y+ + +C++ A F EM G+
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
PN T+ +I+G CS G+ +A+ + ++ + N AS
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS------------ 376
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
V K+ EK + L D S ++ C A + + M
Sbjct: 377 -----VKEGKLFEAEKLCDEMLHRCIFPDTVTYNS---MIYGFCKHNRFDDAKHMFDLMA 428
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S P + ++ ++D C + L RG + TY T+I+ +C +++L
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
A DLFQ+M G+ PD IT +LLYG +N + + ++ ++ ++I LD V Y+++
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNII 543
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+G+ K ++A LF + G+EPD TY MIS + K + +A+ L +M G
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 426 TPSSHIISAVNRSILKARKV 445
P + + + R LKA ++
Sbjct: 604 EPDNSTYNTLIRGCLKAGEI 623
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 12/369 (3%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG ++ + +E+ + D V Y+ + D LCK G DA + E+ K I ++
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +I G+C G DA + +M + PD++T+N L + + + A DEM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN---- 176
+ P++ T+ +I G C + +A+ F+ + V ++ +++ YC A +
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 177 -----NNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+ G + T + + G+C+VD + A +LF E+ + G +C LL C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
+ +A++L E ++ ++ + Y+I++ +C K A LF S G PDV
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
TY MI+ +C +++ +A LF MK G +PD TY L+ G K A +D + +
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK-AGEIDKSIELISE 632
Query: 350 MKQTEISLD 358
M+ S D
Sbjct: 633 MRSNGFSGD 641
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 118/311 (37%), Gaps = 67/311 (21%)
Query: 19 MFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAF 78
+F D V YN + CK + DDA M + + D+ + T+I YC + +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVYCRAKRVDEGM 452
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+ E+ +G + TYN L G C D A + F EM S GV P++ T +++ G
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 139 CSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
C K+ EA F +Q +++ Y+ +++G C+ S
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK-------------------- 552
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
V++A++LF L G VEP
Sbjct: 553 ----VDEAWDLFCSLPIHG-----------------------------------VEPDVQ 573
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y++++ C A LF G PD TY T+I + + ++++L +M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 315 KRRGIKPDVIT 325
+ G D T
Sbjct: 634 RSNGFSGDAFT 644
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 77/136 (56%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ ++ F+ + S + LD VAYNI+ +CK KVD+A ++ L + ++ D++ Y +I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G+C + + DA +F++MK+ G +PD TYN L G + E +I EM S+G
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Query: 126 PNSTTHKMIIEGLCSV 141
++ T KM E +C V
Sbjct: 640 GDAFTIKMAEEIICRV 655
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 195/426 (45%), Gaps = 56/426 (13%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ +SG+ + + IV + LC+ G+V+ + ++ +E VK I + Y T+I Y
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 71 Q-----------------------------------GNLIDAFYMFNEMKNKGFKPDIVT 95
Q G + DA +F+EM+ +G + D+
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 96 YNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
Y L + CR + A FDE+ G+ P+S T+ +I+G+C VG++G AE N +Q
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 156 DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDI 215
K V I + N + GYC+ +V++A ++ + KG
Sbjct: 392 SKGVNITQVVFNTLID--------------------GYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 216 AKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL 275
A +C + + + +A + L M V+ S + Y+ ++D C G + A+ L
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
F +G P+ +TY MI +YC+ +KEA L +M+ G+ PD TYT L++G
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
A +D ++ +M + + V Y+V+I+GL K ++A L+++M KG D
Sbjct: 552 -ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 396 TYTDMI 401
YT +I
Sbjct: 611 VYTALI 616
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 219/483 (45%), Gaps = 86/483 (17%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLG-------------------KVDDAIEMREELRV 51
F+ + ++GMF +G+ VFD + K G ++D +E+ +
Sbjct: 161 FRVYVDNGMFEEGLR---VFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 52 KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARV 111
+ + + T +++G C +G + + + E KG KP+ TYN + + +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 112 AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVN 167
M+ DGV N T+ +++E GK+ +AE F+ ++++ +E +Y+++++
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 168 GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
C N +++A+ LF EL+ KG + L+
Sbjct: 338 WNCRKGN------------------------MKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
+C VG++G A L+ M+S V +Q++++ ++D C G A ++D +GF D
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 288 V-----------------------------------VTYTTMINSYCRMNSLKEALDLFQ 312
V V+YT +I+ YC+ +++EA LF
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
+M +G++P+ ITY V++Y K + + +M+ + D Y+ LI+G
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEA-RKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
DN ++A+RLF +M KGL+ + VTYT MIS K G EA L DEM KG T + +
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVY 612
Query: 433 SAV 435
+A+
Sbjct: 613 TAL 615
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 21/365 (5%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S V K K+ G+ + V Y ++ + K GK+ DA ++ +E+R + I+ D+ YT+L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I C +GN+ AF +F+E+ KG P TY L GVC+ E A +EM+S GV
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
+I+G C G V EA ++ ++ K + N N Y
Sbjct: 396 NITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY----- 450
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
++A + + G S L+ C G++ +A +L M
Sbjct: 451 ---------------DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
S V+P+ I Y++++ A C GK K AR L + G PD TYT++I+ C +++
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
EA+ LF +M +G+ + +TYTV++ G A D ++ +MK+ ++D Y+
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISG-LSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 365 LINGL 369
LI +
Sbjct: 615 LIGSM 619
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E G+ + + YN++ A CK GK+ +A ++R + +D D YT+LI G C+
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECI 551
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
N+ +A +F+EM KG + VTY V+ +G+ + ++ A +DEM+ G ++
Sbjct: 552 ADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Query: 131 HKMIIEGLCS 140
+ +I + S
Sbjct: 612 YTALIGSMHS 621
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 199/408 (48%), Gaps = 32/408 (7%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
+NI+ + LCK GK+ A + V I I Y TL++G+ L+G + A + +EM
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
K+KGF+PD+ TYN + + +C A + EM+ G+ P+S ++ ++I G + G +
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDL 343
Query: 145 GEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
A A+ + + + + Y+ +++G + ++K +E
Sbjct: 344 EMAFAYRDEMVKQGMVPTFYTYNTLIHGL---------FMENK---------------IE 379
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
A L E+ KG + + L+ C GD KA L + M + ++P+Q Y+ ++
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
LC KT+ A LF+ VG+G PD+V T+++ +C + ++ A L ++M I
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
PD +TY L+ G + + +MK+ I D + Y+ LI+G K + + A
Sbjct: 500 PDDVTYNCLMRG-LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFM 558
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ ++M+ G P +TY ++ K + A ELL EM S+G+ P+
Sbjct: 559 VRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 149/316 (47%), Gaps = 28/316 (8%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+E KE G+ D V+YNI+ G ++ A R+E+ + + Y TLI G +
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ + A + E++ KG D VTYN+L G C++ +A+ A DEM +DG++P T
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ +I LC K EA+ F ++ K ++ M+N +
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD------------------- 475
Query: 191 VGYCKVDLVEKAYELFLELS----NKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
G+C + +++A+ L E+ N D+ +C L+ LC G +A +L+ M+
Sbjct: 476 -GHCAIGNMDRAFSLLKEMDMMSINPDDVTY--NC--LMRGLCGEGKFEEARELMGEMKR 530
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
++P I Y+ ++ G TKHA + D + GF P ++TY ++ + +
Sbjct: 531 RGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 307 ALDLFQDMKRRGIKPD 322
A +L ++MK GI P+
Sbjct: 591 AEELLREMKSEGIVPN 606
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 114/232 (49%), Gaps = 4/232 (1%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
C++ +V++A E F + KG K E+C +LT L + I A M + ++ +
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
++I+++ LC GK K A+ G P +VTY T++ + ++ A + +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
MK +G +PD+ TY +L A +V+ R+MK+ + D V Y++LI G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASEVL----REMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+ E A ++M+ +G+ P TY +I + + ++ A L+ E+ KG+
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 158/364 (43%), Gaps = 33/364 (9%)
Query: 69 CLQGNLID-AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C Q ++D A F MK KGF P T N + + R + A + +M ++ N
Sbjct: 165 CCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSN 224
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDK 183
T ++I LC GK+ +A+ ++ ++ Y+ +V G+
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR--------- 275
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+E A + E+ +KG ++ +L+ +C + G+A ++L
Sbjct: 276 ---------------IEGARLIISEMKSKGFQPDMQTYNPILSWMC---NEGRASEVLRE 317
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M+ + + P + Y+I++ + G + A + D V +G P TY T+I+ N
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
++ A L ++++ +GI D +TY +L+ G ++ A + +M I Y+
Sbjct: 378 IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF-ALHDEMMTDGIQPTQFTYT 436
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
LI L + + +A LFE ++ KG++PD V ++ + G M A LL EM
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 424 GMTP 427
+ P
Sbjct: 497 SINP 500
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V YN + LC GK ++A E+ E++ + I D Y TLI GY +G+ AF +
Sbjct: 501 DDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVR 560
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+EM + GF P ++TYN L G+ +N E +A EM+S+G+ PN ++ +IE + ++
Sbjct: 561 DEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 220/470 (46%), Gaps = 33/470 (7%)
Query: 4 DSDVVDK-FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
D + VDK + E K + V YNI+ + K GK+++A ++R + +
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEM 119
LI+GYC QG DA+ + +EM N G P TYN+ +C R D+AR E+
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR-------EL 365
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNN 175
S P+ ++ ++ G +GK EA F+ L+ S+ Y+ +++G CE+ N
Sbjct: 366 LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 176 NNN------------YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK 223
+ D + T + + G+ K + A E++ E+ KG +
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVK-GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVE-PSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
+GD KA +L E M + + P +Y++ +D LC VG A
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PD VTYTT+I Y K A +L+ +M R+ + P VITY VL+YG K A L+
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK-AGRLEQ 603
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+MK+ + +V+ ++ L+ G+ K N ++A R M ++G+ P+K +YT +IS
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK---ARKVQFHE 449
+E +L EM K + P + A+ + + K +R+V+F E
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLE 713
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 192/397 (48%), Gaps = 26/397 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ D E +G++ YNI ALC G++DDA E+ + D+ Y
Sbjct: 322 GLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSY 377
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TL+ GY G ++A +F++++ P IVTYN L G+C + A +EM +
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+ P+ T+ +++G G + A ++ + K ++ +GY +
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK-----PDGYAYTTR------- 485
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL-LTKLCLVGDIGKAMKL 240
VG ++ +KA+ L E+ A + + + + + LC VG++ KA++
Sbjct: 486 --------AVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ + + P + Y+ V+ G+ K AR+L+D + + P V+TY +I + +
Sbjct: 538 QRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK 597
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
L++A +MK+RG++P+V+T+ LLYG K A +D M++ I +
Sbjct: 598 AGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK-AGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
Y++LI+ + +E+ ++L+++M+DK +EPD T+
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 174/403 (43%), Gaps = 26/403 (6%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
NIV L ++ A + E + I + + T++ G+L ++ EMK
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+ + VTYN+L G +N + A +M G + +IEG C G
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQG---- 322
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
L D + + M+N + + N I C ++ A EL
Sbjct: 323 -------LFDDAWGVTDEMLNAGIYPTTSTYN---------IYICALCDFGRIDDARELL 366
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
++ D+ + K+ G +A L + +R+ ++ PS + Y+ ++D LC
Sbjct: 367 SSMAAP-DVVSYNTLMHGYIKM---GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G + A+ L + + PDV+TYTT++ + + +L A +++ +M R+GIKPD Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTE-ISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
T G + + D + +M T+ + D+ Y+V I+GL K N AI +
Sbjct: 483 TTRAVGELRLGDS-DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
GL PD VTYT +I Y + G K A L DEM K + PS
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 124/303 (40%), Gaps = 65/303 (21%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K + EK F ++ KG + +C +L L + KA + ETM + P+
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
I ++ +LD+ G + ++ R VTY +IN + + ++EA
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 313 DMKRR-----------------------------------GIKPDVITYTVLL-----YG 332
DM+R GI P TY + + +G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Query: 333 SFKNA-------AALDVI--NT----------------IWRDMKQTEISLDVVCYSVLIN 367
+A AA DV+ NT ++ D++ +I +V Y+ LI+
Sbjct: 358 RIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
GL ++ N E A RL E+M + + PD +TYT ++ + K G + A+E+ DEM KG+ P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 428 SSH 430
+
Sbjct: 478 DGY 480
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 181/403 (44%), Gaps = 29/403 (7%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V YNI+ +LC GK+D A+++ +L N + YT LI+ L+G + +A +
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+EM ++G KPD+ TYN + G+C+ A +E G EP+ ++ +++ L +
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 142 GKVGEAE----AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
GK E E F+ D +V YS ++ C D K
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR---------DGK-------------- 348
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+E+A L + KG S L+ C G + A++ LETM S P + Y+
Sbjct: 349 -IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
VL LC GK A +F G +P+ +Y TM ++ AL + +M
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
GI PD ITY ++ +D + DM+ E VV Y++++ G K ED
Sbjct: 468 GIDPDEITYNSMI-SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
AI + E M+ G P++ TYT +I G EA EL +++
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 29/394 (7%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D+ Y LI G+C + DA + + M++K F PD VTYN++ +C + +A+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEA 172
+++ SD +P T+ ++IE G V EA + + + ++ Y+ ++ G C
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC-- 274
Query: 173 SNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
K +V++A+E+ L KG S LL L G
Sbjct: 275 ----------------------KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ KL+ M S +P+ + YSI++ LC GK + A +L +G TPD +Y
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+I ++CR L A++ + M G PD++ Y +L KN A D I+ + +
Sbjct: 373 PLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA-DQALEIFGKLGE 431
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
S + Y+ + + L + + A+ + +M+ G++PD++TY MIS ++G++ E
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491
Query: 413 ASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
A ELL +M S PS + V KA +++
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIE 525
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 159/339 (46%), Gaps = 23/339 (6%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E G+ D YN + +CK G VD A EM L +K + D+ Y L++ QG
Sbjct: 253 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQG 312
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ + +M ++ P++VTY++L +CR+ + A+N M+ G+ P++ ++
Sbjct: 313 KWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYD 372
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVG 192
+I C G++ D ++E M++ C N N T ++ +
Sbjct: 373 PLIAAFCREGRL-----------DVAIEFLETMISDGCLPDIVNYN-------TVLATL- 413
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
CK ++A E+F +L G S + + L GD +A+ ++ M S ++P
Sbjct: 414 -CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+I Y+ ++ LC G A L F P VVTY ++ +C+ + +++A+++ +
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 313 DMKRRGIKPDVITYTVLLYG---SFKNAAALDVINTIWR 348
M G +P+ TYTVL+ G + A A+++ N + R
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 162/360 (45%), Gaps = 59/360 (16%)
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C GN I++ ++ M KG+ PD++ L G + N P +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGF-------FTLRNI---------PKA 143
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
I+E K G+ + V Y+A++NG+C
Sbjct: 144 VRVMEILE------KFGQPD----------VFAYNALINGFC------------------ 169
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT-KLCLVGDIGKAMKLLETMRSL 247
K++ ++ A + + +K D + + + ++ LC G + A+K+L + S
Sbjct: 170 ------KMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
N +P+ I Y+I+++A G A L D + RG PD+ TY T+I C+ + A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
++ ++++ +G +PDVI+Y +LL + N + + M + +VV YS+LI
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLR-ALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
L + E+A+ L + M +KGL PD +Y +I+ + ++G + A E L+ M S G P
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 147/315 (46%), Gaps = 20/315 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + + + G D ++YNI+ AL GK ++ ++ ++ + D ++ Y
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ LI C G + +A + MK KG PD +Y+ L A CR VAI + M S
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
DG P+ + ++ LC GK D+++EI+ + G S N+++Y
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKA-----------DQALEIFGKL--GEVGCSPNSSSYN- 442
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
T S + + D + +A + LE+ + G E + +++ LC G + +A +LL
Sbjct: 443 ----TMFSAL-WSSGDKI-RALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
MRS PS + Y+IVL C + + A ++ +S VG G P+ TYT +I
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFA 556
Query: 302 NSLKEALDLFQDMKR 316
EA++L D+ R
Sbjct: 557 GYRAEAMELANDLVR 571
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 2/230 (0%)
Query: 217 KEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
++ K+ + C G+ +++ LLETM P I+ + ++ + A +
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN 336
+ G PDV Y +IN +C+MN + +A + M+ + PD +TY +++ GS +
Sbjct: 148 EILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI-GSLCS 205
Query: 337 AAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVT 396
LD+ + + V+ Y++LI M ++A++L ++M+ +GL+PD T
Sbjct: 206 RGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFT 265
Query: 397 YTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
Y +I K+G++ A E++ + KG P + + R++L K +
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 34/418 (8%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
++NI+ + LC +G + +A+E+ ++ ++ D Y L KG+ L G + A+ + +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH-KMIIEGLCSVGK 143
+KG PD++TY +L G C+ + + +M S G E NS +++ GLC G+
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ EA + FN+++ + D I G CK+ + A
Sbjct: 379 IDEALSLFNQMK--------------------ADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
L+ E+ +K + + LL LC G + +A LL+++ S ++Y+IV+D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
G + A LF + G TP V T+ ++I YC+ ++ EA + +K G+ P V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 324 ITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA----- 378
++YT L+ ++ N I+ + R+MK I V YSV+ GL + +E+
Sbjct: 539 VSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 379 IRLFE-------DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
R+FE DM +G+ PD++TY +I + + A L+ M S+ + SS
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 31/428 (7%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-Y 61
M D + K+ K+ + + +YN V L + D ++ +E++ KN +H Y
Sbjct: 139 MVDDSLYILKKMKDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDKN-----EHTY 190
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+T++ G C Q L DA + K P +V++N + +G C+ +A + F +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P+ +H ++I GLC VG + EA +E+ S M N +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEA-----------LELASDM---------NKHGVEP 290
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
D I G+ + ++ A+E+ ++ +KG + LL C +G+I + LL
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 242 ETMRSLNVEPSQIM-YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ M S E + I+ S++L LC G+ A SLF+ G +PD+V Y+ +I+ C+
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ AL L+ +M + I P+ T+ LL G + L+ ++ + + +LD+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLLDSLISSGETLDIV 469
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y+++I+G K+ E+A+ LF+ +I+ G+ P T+ +I Y K + EA ++LD +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 421 SSKGMTPS 428
G+ PS
Sbjct: 530 KLYGLAPS 537
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 199/440 (45%), Gaps = 32/440 (7%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D +KE K+ + Y+ V D LC+ K++DA+ K+I + + +++ GY
Sbjct: 177 DVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G + A F + G P + ++N+L G+C A+ +M GVEP+S
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKS 184
T+ ++ +G +G + A + DK + Y+ ++ G C+ N + K
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK- 351
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
D++ + +EL C +L+ LC G I +A+ L M
Sbjct: 352 ------------DMLSRGFEL----------NSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
++ + P + YSIV+ LC +GK A L+D + P+ T+ ++ C+ L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
EA L + G D++ Y +++ G K+ + + +++ + +T I+ V ++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE-LFKVVIETGITPSVATFNS 508
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI G KT N +A ++ + + GL P V+YT ++ Y G K EL EM ++G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 425 MTPSSHIISAVNRSILKARK 444
+ P++ S + + + + K
Sbjct: 569 IPPTNVTYSVIFKGLCRGWK 588
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 205/457 (44%), Gaps = 47/457 (10%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLD-IK 59
+GM S + ++ + G+ D + Y I+ C+LG +D + + +++ + +L+ I
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ ++ G C G + +A +FN+MK G PD+V Y+++ G+C+ + +A+ +DEM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL----QDKSVEIYSAMVNGYCEASNN 175
+ PNS TH ++ GLC G + EA + + L + + +Y+ +++GY
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA----- 479
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
K +E+A ELF + G + L+ C +I
Sbjct: 480 -------------------KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A K+L+ ++ + PS + Y+ ++DA + G TK L G P VTY+ +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 296 NSYCRM-------NSLKEAL-----DLFQDMKRRGIKPDVITY-TVLLY-GSFKNAAALD 341
CR + L+E + +DM+ GI PD ITY T++ Y K+ +
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
V I MK + Y++LI+ L A + ++ + K YT +I
Sbjct: 641 VFLEI---MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV-NR 437
+ KG + A +L ++ +G S SAV NR
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINR 734
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YNI+ D+LC G + A L+ +N+ L YTTLIK +C++G+ A +F+++
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
++GF I Y+ + +CR R +N F +S+GV
Sbjct: 717 LHRGFNVSIRDYSAVINRLCR----RHLMNCFPG-QSNGV 751
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 198/418 (47%), Gaps = 34/418 (8%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
++NI+ + LC +G + +A+E+ ++ ++ D Y L KG+ L G + A+ + +M
Sbjct: 259 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM 318
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH-KMIIEGLCSVGK 143
+KG PD++TY +L G C+ + + +M S G E NS +++ GLC G+
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ EA + FN+++ + D I G CK+ + A
Sbjct: 379 IDEALSLFNQMK--------------------ADGLSPDLVAYSIVIHGLCKLGKFDMAL 418
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
L+ E+ +K + + LL LC G + +A LL+++ S ++Y+IV+D
Sbjct: 419 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
G + A LF + G TP V T+ ++I YC+ ++ EA + +K G+ P V
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 324 ITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA----- 378
++YT L+ ++ N I+ + R+MK I V YSV+ GL + +E+
Sbjct: 539 VSYTTLM-DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 379 IRLFE-------DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
R+FE DM +G+ PD++TY +I + + A L+ M S+ + SS
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASS 655
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 207/428 (48%), Gaps = 31/428 (7%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-Y 61
M D + K+ K+ + + +YN V L + D ++ +E++ KN +H Y
Sbjct: 139 MVDDSLYILKKMKDQNLNVSTQSYNSV---LYHFRETDKMWDVYKEIKDKN-----EHTY 190
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+T++ G C Q L DA + K P +V++N + +G C+ +A + F +
Sbjct: 191 STVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK 250
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P+ +H ++I GLC VG + EA +E+ S M N +
Sbjct: 251 CGLVPSVYSHNILINGLCLVGSIAEA-----------LELASDM---------NKHGVEP 290
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
D I G+ + ++ A+E+ ++ +KG + LL C +G+I + LL
Sbjct: 291 DSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLL 350
Query: 242 ETMRSLNVEPSQIM-YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ M S E + I+ S++L LC G+ A SLF+ G +PD+V Y+ +I+ C+
Sbjct: 351 KDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCK 410
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ AL L+ +M + I P+ T+ LL G + L+ ++ + + +LD+V
Sbjct: 411 LGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA-RSLLDSLISSGETLDIV 469
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y+++I+G K+ E+A+ LF+ +I+ G+ P T+ +I Y K + EA ++LD +
Sbjct: 470 LYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI 529
Query: 421 SSKGMTPS 428
G+ PS
Sbjct: 530 KLYGLAPS 537
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 199/440 (45%), Gaps = 32/440 (7%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D +KE K+ + Y+ V D LC+ K++DA+ K+I + + +++ GY
Sbjct: 177 DVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGY 232
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G + A F + G P + ++N+L G+C A+ +M GVEP+S
Sbjct: 233 CKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDS 292
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ ++ +G +G + A + DK V Y+ ++ G C+ N + K
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK- 351
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
D++ + +EL C +L+ LC G I +A+ L M
Sbjct: 352 ------------DMLSRGFEL----------NSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
++ + P + YSIV+ LC +GK A L+D + P+ T+ ++ C+ L
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
EA L + G D++ Y +++ G K+ + + +++ + +T I+ V ++
Sbjct: 450 LEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALE-LFKVVIETGITPSVATFNS 508
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI G KT N +A ++ + + GL P V+YT ++ Y G K EL EM ++G
Sbjct: 509 LIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 425 MTPSSHIISAVNRSILKARK 444
+ P++ S + + + + K
Sbjct: 569 IPPTNVTYSVIFKGLCRGWK 588
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 205/457 (44%), Gaps = 47/457 (10%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLD-IK 59
+GM S + ++ + G+ D + Y I+ C+LG +D + + +++ + +L+ I
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ ++ G C G + +A +FN+MK G PD+V Y+++ G+C+ + +A+ +DEM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL----QDKSVEIYSAMVNGYCEASNN 175
+ PNS TH ++ GLC G + EA + + L + + +Y+ +++GY
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA----- 479
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
K +E+A ELF + G + L+ C +I
Sbjct: 480 -------------------KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A K+L+ ++ + PS + Y+ ++DA + G TK L G P VTY+ +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 296 NSYCRM-------NSLKEAL-----DLFQDMKRRGIKPDVITY-TVLLY-GSFKNAAALD 341
CR + L+E + +DM+ GI PD ITY T++ Y K+ +
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
V I MK + Y++LI+ L A + ++ + K YT +I
Sbjct: 641 VFLEI---MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLI 697
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV-NR 437
+ KG + A +L ++ +G S SAV NR
Sbjct: 698 KAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINR 734
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YNI+ D+LC G + A L+ +N+ L YTTLIK +C++G+ A +F+++
Sbjct: 657 TYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQL 716
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
++GF I Y+ + +CR R +N F +S+GV
Sbjct: 717 LHRGFNVSIRDYSAVINRLCR----RHLMNCFPG-QSNGV 751
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 192/427 (44%), Gaps = 64/427 (14%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D F E + + YN + D CK G + + ++RE ++ +I+ + + TL
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+KG G + DA + EMK+ GF PD T+++L G N++A A+ ++ GV
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
+ N+ T +++ LC GK+ +AE R K + IY+ M++GYC
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC---------- 400
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
KGD+ +G MK
Sbjct: 401 ------------------------------RKGDL------------------VGARMK- 411
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+E M ++P + Y+ ++ C +G+ ++A + +G +P V TY +I Y R
Sbjct: 412 IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGR 471
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ D+ ++M+ G P+V++Y L+ K + L+ + RDM+ +S V
Sbjct: 472 KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA-QIVKRDMEDRGVSPKVR 530
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y++LI+G EDA R ++M+ KG+E + VTY +I G + EA +LL E+
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Query: 421 SSKGMTP 427
S KG+ P
Sbjct: 591 SRKGLKP 597
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 22/444 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM D + KE K+ G D ++I+FD K + A+ + E + ++
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ L+ C +G + A + KG P+ V YN + G CR + A + ME
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNN 177
G++P+ + +I C +G++ AE N+++ K SVE Y+ ++ GY +
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 178 NYG-----DDKSPTPISEVGY-------CKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+ +D P + V Y CK + +A + ++ ++G K L+
Sbjct: 478 CFDILKEMEDNGTMP-NVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLI 536
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
C G I A + + M +E + + Y+ ++D L GK A L +G
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
PDV TY ++I+ Y +++ + L+++MKR GIKP + TY +L+ S +++
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI--SLCTKEGIELTER 654
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
++ +M + D++ Y+ +++ + E A L + MI+K + DK TY +I
Sbjct: 655 LFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQL 711
Query: 406 KKGLMKEASELLDEMSSKGMTPSS 429
K G + E L+DEM+++ M P +
Sbjct: 712 KVGKLCEVRSLIDEMNAREMEPEA 735
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 195/419 (46%), Gaps = 35/419 (8%)
Query: 10 KFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYC 69
K + ++ GM D +AYN + C+LG++++A + ++++K + ++ Y LI GY
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ F + EM++ G P++V+Y L +C+ + A +ME GV P
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVR 530
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSP 185
+ M+I+G CS GK+ +A + K +E+ Y+ +++G
Sbjct: 531 IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG----------------- 573
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+S G + +A +L LE+S KG + L++ G++ + + L E M+
Sbjct: 574 --LSMTGK-----LSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSL 304
++P+ Y +++ +LC TK L + G PD++ Y +++ Y +
Sbjct: 627 RSGIKPTLKTYHLLI-SLC----TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
++A +L + M + I D TY L+ G K L + ++ +M E+ + Y++
Sbjct: 682 EKAFNLQKQMIEKSIGLDKTTYNSLILGQLK-VGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++ G + +Y A + +M +KG D +++S ++ KEA ++ EM+ +
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 179/429 (41%), Gaps = 21/429 (4%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
M S+ D F + G++ + ++ D L K + I + + + Y
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
I+ ++ +FN MK+ P + YNVL G+C+ A FDEM +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
+ P+ T+ +I+G C G +KS ++ M + E S N
Sbjct: 244 RLLPSLITYNTLIDGYCKAGN-----------PEKSFKVRERMKADHIEPSLITFN---- 288
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
T + G K +VE A + E+ + G + + L A+ + E
Sbjct: 289 ---TLLK--GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
T V+ + SI+L+ALC GK + A + + +G P+ V Y TMI+ YCR
Sbjct: 344 TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKG 403
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
L A + M+++G+KPD + Y L+ F ++ MK +S V Y
Sbjct: 404 DLVGARMKIEAMEKQGMKPDHLAYNCLIR-RFCELGEMENAEKEVNKMKLKGVSPSVETY 462
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
++LI G + ++ + ++M D G P+ V+Y +I+ K + EA + +M
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 423 KGMTPSSHI 431
+G++P I
Sbjct: 523 RGVSPKVRI 531
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 1/252 (0%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
++ +A +LF L N+G +S LL L + + + + PS+ MY
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+ A + LF+ P V Y +I+ C+ + +A LF +M R
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
+ P +ITY L+ G K A + + MK I ++ ++ L+ GL K ED
Sbjct: 244 RLLPSLITYNTLIDGYCK-AGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A + ++M D G PD T++ + Y + A + + G+ +++ S +
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLN 362
Query: 438 SILKARKVQFHE 449
++ K K++ E
Sbjct: 363 ALCKEGKIEKAE 374
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 219/500 (43%), Gaps = 67/500 (13%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+E G D Y+ V + LC K++ A + EE++ + D+ YT ++ +C
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G + A FNEM+ G P++VTY L + + A F+ M S+G PN T+
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 132 KMIIEGLCSVGKVGEAEAHFNRL--------------------QDKSVEIYSAMVNGYCE 171
+I+G C G+V +A F R+ + +V Y A+++G+C+
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 172 ASN--NNNNYGDDKS-----PTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEES 220
+ D S P I G CKV +++A E+ E+S G A +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 221 CFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV 280
L+ + V A K+L M + P+ ++Y+ ++D LC VGKT A L
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 281 GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAAL 340
+G P+VVTYT MI+ + + ++ L+L + M +G+ P+ +TY VL+ KN AL
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN-GAL 830
Query: 341 DVINTIWRDMKQT----------------------------EISLD-----VVCYSVLIN 367
DV + + +MKQT EI D + Y +LI+
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 368 GLMKTDNYEDAIRLFEDM--IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
L+K E A+RL E++ L TY +I ++ A +L EM+ KG+
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 426 TPSSHIISAVNRSILKARKV 445
P ++ + + + K+
Sbjct: 951 IPEMQSFCSLIKGLFRNSKI 970
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 184/436 (42%), Gaps = 46/436 (10%)
Query: 6 DVVDK-FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
D+ +K + E +G+ L+ + + LC GK + A + E+ + D Y+ +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ C + AF +F EMK G D+ TY ++ C+ A F+EM G
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYG 180
PN T+ +I KV A F + + ++ YSA+++G+C+A
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ------ 603
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK----------------L 224
VEKA ++F + D+ + FK L
Sbjct: 604 ------------------VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
L C + +A KLL+ M EP+QI+Y ++D LC VGK A+ + GF
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+ TY+++I+ Y ++ A + M P+V+ YT ++ G K D
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK-VGKTDEAY 764
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+ + M++ +VV Y+ +I+G E + L E M KG+ P+ VTY +I
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 405 YKKGLMKEASELLDEM 420
K G + A LL+EM
Sbjct: 825 CKNGALDVAHNLLEEM 840
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 198/473 (41%), Gaps = 47/473 (9%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+E + + +DG +LCK+GK +A+ + E +N D YT LI G C
Sbjct: 259 REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEA 315
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
+A N M+ P++VTY+ L G + + M +G P+
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVE--------IYSAMVNGYCEASNNNNNYGDDK 183
++ C+ G ++ +L K V+ +Y+ ++ C ++ N D
Sbjct: 376 NSLVHAYCTSGD----HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDL 431
Query: 184 SPTPISEV-----------------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
+ SE+ C EKA+ + E+ +G I + K+L
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
LC + A L E M+ + Y+I++D+ C G + AR F+ G TP
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+VVTYT +I++Y + + A +LF+ M G P+++TY+ L+ G K
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 347 WR-----DMKQTEISL----------DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
R D+ ++ +VV Y L++G K+ E+A +L + M +G E
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCE 671
Query: 392 PDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
P+++ Y +I K G + EA E+ EMS G + + S++ K ++
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 182/435 (41%), Gaps = 46/435 (10%)
Query: 29 VFDALCKLGKVDDAIEMREEL--RVKNIDLDI--KHYTTLIKGYCLQGNLIDAFYMFNEM 84
V++AL L DD ++ EE ++++ D ++ + L++ +C G+ A +
Sbjct: 167 VYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRL 226
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
K+ F+P TYN L + D A EM + + T + LC VGK
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKW 286
Query: 145 GEAEAHF---NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
EA N + D Y+ +++G CEAS L E+
Sbjct: 287 REALTLVETENFVPDTV--FYTKLISGLCEAS------------------------LFEE 320
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A + + + + LL +G+ ++L M PS +++ ++
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR-MNSLK-EALDL----FQDMK 315
A C G +A L V G P V Y +I S C +SL + LDL + +M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEML 440
Query: 316 RRGI---KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
G+ K +V ++T L + K A VI R+M D YS ++N L
Sbjct: 441 AAGVVLNKINVSSFTRCLCSAGKYEKAFSVI----REMIGQGFIPDTSTYSKVLNYLCNA 496
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
E A LFE+M GL D TYT M+ + K GL+++A + +EM G TP+
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 433 SAVNRSILKARKVQF 447
+A+ + LKA+KV +
Sbjct: 557 TALIHAYLKAKKVSY 571
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 173/424 (40%), Gaps = 72/424 (16%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
DV FK++ ++ + V Y + D CK +V++A ++ + + ++ + + Y LI
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G L +A + EM GF + TY+ L + +A +M +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGD 181
PN + +I+GLC VGK EA +++K +V Y+AM++G+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF------------ 789
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
G I K E+C ++LL
Sbjct: 790 -------------------------------GMIGKIETC----------------LELL 802
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E M S V P+ + Y +++D C G A +L + + Y +I + +
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK- 861
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
E+L L ++ + P + Y +L+ K A L++ + ++ S +V
Sbjct: 862 -EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK-AQRLEMALRLLEEV--ATFSATLVD 917
Query: 362 YSVLINGLMKT----DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
YS N L+++ + E A +LF +M KG+ P+ ++ +I ++ + EA LL
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Query: 418 DEMS 421
D +S
Sbjct: 978 DFIS 981
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 20/236 (8%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+E G + V Y + D +GK++ +E+ E + K + + Y LI C G L
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A + EMK + Y + G N E ++ DE+ D P + ++++
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
I+ L K E L++ V +SA + Y N+ C
Sbjct: 889 IDNLI---KAQRLEMALRLLEE--VATFSATLVDYSSTYNSLIE-------------SLC 930
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
+ VE A++LF E++ KG I + +S L+ L I +A+ LL+ + + ++
Sbjct: 931 LANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 7 VVDKF-KEFKESGMFLDGVA----------YNIVFDALCKLGKVDDAIEMREELRVKNID 55
V++ F KEF ES LD + Y ++ D L K +++ A+ + EE+ +
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 56 LD--IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN---DEAR 110
L Y +LI+ CL + AF +F+EM KG P++ ++ L G+ RN EA
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Query: 111 VAINNFDEMESDGVEPNSTT 130
+ ++ ME +E T+
Sbjct: 975 LLLDFISHMEIQWIEEKKTS 994
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 55/436 (12%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y+ LI G C G L +AF + ++M KG +P TY VL +C A N FDEM
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL-QDK---SVEIYSAMVNGYCEASNNN 176
G +PN T+ ++I+GLC GK+ EA ++ +D+ SV Y+A++NGYC+
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 177 NNYG-----DDKSPTP----ISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+ + ++ P +E+ G C+V KA L + + G S L+
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
LC G + A KLL +M ++EP + ++ +++A C GK A + + +G +
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGIS 508
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQ------------------DMKRRGIK------- 320
D VT TT+I+ C++ ++AL + + DM +G K
Sbjct: 509 LDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 321 ----------PDVITYTVLLYGSFKNAAALDVINT--IWRDMKQTEISLDVVCYSVLING 368
P V+TYT L+ G ++ D+ + I MK + +V Y+++ING
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSG---DITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L + E+A +L M D G+ P+ VTYT M+ Y G + A E + M +G +
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELN 685
Query: 429 SHIISAVNRSILKARK 444
I S++ + + ++K
Sbjct: 686 DRIYSSLLQGFVLSQK 701
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 18/370 (4%)
Query: 74 LIDAFYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
++ Y F+E++ GF+ + Y+ L + + D +A + ME+DG ++
Sbjct: 140 MLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYR 199
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNN--------NYG 180
I+ LC G AE +++ I ++++ G+C N + +
Sbjct: 200 TIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 181 DDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+P +S G C+V +E+A+ L ++ KG + L+ LC G I K
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A L + M +P+ Y++++D LC GK + A + V P V+TY +IN
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
YC+ + A +L M++R KP+V T+ L+ G + ++ + R M +S
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR-MLDNGLS 438
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D+V Y+VLI+GL + + A +L M +EPD +T+T +I+ + K+G AS
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 417 LDEMSSKGMT 426
L M KG++
Sbjct: 499 LGLMLRKGIS 508
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 28/302 (9%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G V K ++G+ D V+YN++ D LC+ G ++ A ++ + +I+ D
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+T +I +C QG A M KG D VT L GVC+ + R A+ + +
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNN 176
+ + +I++ L KV E A ++ SV Y+ +V+G + +
Sbjct: 539 KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIT 598
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
++ + EL ++LS G + ++ LC G + +
Sbjct: 599 GSF---------------------RILEL-MKLS--GCLPNVYPYTIIINGLCQFGRVEE 634
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A KLL M+ V P+ + Y++++ + GK A + V RG+ + Y++++
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694
Query: 297 SY 298
+
Sbjct: 695 GF 696
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQD-MKRRGIKPDVITYTVLLYGSFKNAAALD 341
GF ++ Y T++N+ C+ N EA ++F + + G D T LL G + D
Sbjct: 190 GFVVGMIDYRTIVNALCK-NGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRD 248
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
+ K+ + + V YS+LI+GL + E+A L + M +KG +P TYT +I
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+GL+ +A L DEM +G P+ H + + + + K++
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM- 314
Y +++ALC G T+ A + GF D T+++ +CR +L++AL +F M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
K P+ ++Y++L++G L+ + M + Y+VLI L
Sbjct: 258 KEVTCAPNSVSYSILIHG-LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ A LF++MI +G +P+ TYT +I + G ++EA+ + +M + PS
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 190/428 (44%), Gaps = 60/428 (14%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIK----HYTTLIKGYCLQ 71
+ G D ++ ALC+ G V+ AI ++ IDL K ++T+LI G C +
Sbjct: 245 QRGFIPDNATCTLILTALCENGLVNRAIWYFRKM----IDLGFKPNLINFTSLIDGLCKK 300
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-ESDGVEPNSTT 130
G++ AF M EM G+KP++ T+ L G+C+ A F ++ SD +PN T
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHT 360
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNY------G 180
+ +I G C K+ AE F+R++++ +V Y+ ++NG+C+A + Y G
Sbjct: 361 YTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMG 420
Query: 181 DDKSPTPISEV-----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
D+ I CK +AYEL + + G A + L+ + C DI
Sbjct: 421 DEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A+ M E + +I++ A C K K + LF V G P TYT+MI
Sbjct: 481 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ YC+ + AL F +MKR G PD TY GS
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTY-----GS---------------------- 573
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
LI+GL K ++A +L+E MID+GL P +VT + Y K+ A
Sbjct: 574 ---------LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 624
Query: 416 LLDEMSSK 423
LL+ + K
Sbjct: 625 LLEPLDKK 632
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 196/453 (43%), Gaps = 37/453 (8%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G ++ V + + G+ + N V + +LG ++ A + +E+ V+ + D
Sbjct: 160 IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSS 219
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y ++ G G + +A M +GF PD T ++ +C N AI F +M
Sbjct: 220 YKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMI 279
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEA----EAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
G +PN +I+GLC G + +A E +V ++A+++G C+
Sbjct: 280 DLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTE 339
Query: 177 NNY--------GDDKSP---TPISEV-GYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ D P T S + GYCK D + +A LF + +G + L
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+ C G G+A +L+ M P+ Y+ +D+LC + A L + G
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
D VTYT +I C+ N + +AL F M + G + D+ +L+ +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ-------- 511
Query: 345 TIWRDMKQTE------ISLDVV----CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
+ MK++E +SL ++ Y+ +I+ K + + A++ F +M G PD
Sbjct: 512 ---KKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Query: 395 VTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
TY +IS KK ++ EA +L + M +G++P
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 28/365 (7%)
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
+++ + G L +A M +M+N+G P +T N + A N FDEM G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK 183
V P+S+++K+++ G GK+ EA+ + + + D
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRG--------------------FIPDN 252
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+ + C+ LV +A F ++ + G + L+ LC G I +A ++LE
Sbjct: 253 ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV-GRGFTPDVVTYTTMINSYCRMN 302
M +P+ ++ ++D LC G T+ A LF V + P+V TYT+MI YC+ +
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA---ALDVINTIWRDMKQTEISLDV 359
L A LF MK +G+ P+V TYT L+ G K + A +++N M ++
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNL----MGDEGFMPNI 428
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
Y+ I+ L K +A L GLE D VTYT +I K+ + +A
Sbjct: 429 YTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCR 488
Query: 420 MSSKG 424
M+ G
Sbjct: 489 MNKTG 493
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 13/302 (4%)
Query: 156 DKSVEIYSAMVNGYCEASNNNNNYG-----DDKSPTPISEVGYC------KVDLVEKAYE 204
K+ E+ M+ + E N G ++ TP S C ++ L+E A
Sbjct: 144 QKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 203
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLV-GDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
+F E+S +G + + S +KL+ C G I +A + L M P +++L AL
Sbjct: 204 VFDEMSVRG-VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
C G A F + GF P+++ +T++I+ C+ S+K+A ++ ++M R G KP+V
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 324 ITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFE 383
T+T L+ G K + ++ +V Y+ +I G K D A LF
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS 382
Query: 384 DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
M ++GL P+ TYT +I+ + K G A EL++ M +G P+ + +A S+ K
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 444 KV 445
+
Sbjct: 443 RA 444
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 92/188 (48%), Gaps = 1/188 (0%)
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
N++ + + +L +G+ A + +G TP +T ++ + ++ A
Sbjct: 142 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 201
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
++F +M RG+ PD +Y +++ G F++ + + +++ I + C ++++
Sbjct: 202 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC-TLILT 260
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
L + AI F MID G +P+ + +T +I KKG +K+A E+L+EM G P
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 428 SSHIISAV 435
+ + +A+
Sbjct: 321 NVYTHTAL 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 35/202 (17%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F ++G D NI+ A C+ K+ ++ + + + + + YT++I YC
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK 545
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G++ A F+ MK G PD TY L +G+C+ A ++ M G+ P T
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Query: 131 H--------------------------------KMIIEGLCSVGKVGEAEAHFNRLQDK- 157
+ ++ LCS KVG A F +L +K
Sbjct: 606 RVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKD 665
Query: 158 --SVEIYSAMVNGYCEASNNNN 177
+ + A C S NN
Sbjct: 666 SSADRVTLAAFTTACSESGKNN 687
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 179/399 (44%), Gaps = 56/399 (14%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
+G+++N+V ALCKL VD AIE+ + + D Y TL+ G C + + +A +
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+EM+++G P V YNVL G+C+ + D M G PN T+ +I GLC
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
GK+ DK+V + MV+ C N+ YG
Sbjct: 306 GKL-----------DKAVSLLERMVSSKCIP--NDVTYGT-------------------- 332
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
L+ L A++LL +M +Q +YS+++
Sbjct: 333 ----------------------LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
L GK + A SL+ +G P++V Y+ +++ CR EA ++ M G P
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ TY+ L+ G FK + + +W++M +T S + CYSVLI+GL ++A+ +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQ-VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
+ M+ G++PD V Y+ +I G M A +L EM
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 204/460 (44%), Gaps = 41/460 (8%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++ F+ E DG Y + D LCK ++D+A+ + +E++ + Y LI G
Sbjct: 207 IEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDG 266
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C +G+L + + M KG P+ VTYN L G+C + A++ + M S PN
Sbjct: 267 LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPN 326
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGY-----CEASNNNNN 178
T+ +I GL + +A + ++++ IYS +++G E + +
Sbjct: 327 DVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWR 386
Query: 179 YGDDKSPTPISEV------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
+K P V G C+ +A E+ + G + + L+ G
Sbjct: 387 KMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTG 446
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+A+++ + M ++ YS+++D LC VG+ K A ++ + G PD V Y+
Sbjct: 447 LCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYS 506
Query: 293 TMINSYCRMNSLKEALDLFQDM---KRRGIKPDVITYTVLLYGSFKN---AAALDVINTI 346
++I C + S+ AL L+ +M + +PDV+TY +LL G + A+D++N+
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNS- 565
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF-EDMIDKGLEPDKVTYTDMISLYY 405
M DV+ + +N L + N D R F E+++ + L+ +V+
Sbjct: 566 ---MLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVS--------- 613
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
A +++ M K + P + + + R I K +K+
Sbjct: 614 ------GACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 138/333 (41%), Gaps = 52/333 (15%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D V +E G L+ Y+++ L K GK ++A+ + ++ K +I Y+ L
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C +G +A + N M G P+ TY+ L G + A+ + EM+ G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
N + ++I+GLC VG+V EA ++++ ++ YS+++ G C
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC---------- 513
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFL---ELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
G +D K Y L E ++ D+ LL LC+ DI +A
Sbjct: 514 -----------GIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI---LLDGLCMQKDISRA 559
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDAL------CHVGKT----------KHAR-----SLF 276
+ LL +M +P I + L+ L C G++ K R ++
Sbjct: 560 VDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIV 619
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+ +G+ P T+ ++ C+ + A+D
Sbjct: 620 EVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
++N+ P+ + +++V+ ALC + A +F R PD TY T+++ C+ +
Sbjct: 180 NMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERID 239
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
EA+ L +M+ G P + Y VL+ G K L + + +M + V Y+ L
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK-GDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+GL + A+ L E M+ P+ VTY +I+ K+ +A LL M +G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 426 TPSSHIISAVNRSILKARKVQ 446
+ HI S + + K K +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAE 379
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 196/404 (48%), Gaps = 22/404 (5%)
Query: 23 GVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFN 82
G N +F CK GKVD A + + K I+ ++ Y ++ +C N+ A +F+
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
EM KG +P+ TY++L G +N + + A + ++M + E N + II GLC VG
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 143 KVGEAEAHF-NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
+ +A+ N +++K YS Y N+ D G+ KV +
Sbjct: 569 QTSKAKEMLQNLIKEKR---YSMSCTSY-------NSIID----------GFVKVGDTDS 608
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A E + E+S G + L+ C + A+++ M+S+ ++ Y ++D
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
C K A +LF G P+V Y ++I+ + + + A+DL++ M GI
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
D+ TYT ++ G K+ +++ + ++ ++ I D + + VL+NGL K + A ++
Sbjct: 729 DLFTYTTMIDGLLKD-GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
E+M K + P+ + Y+ +I+ ++++G + EA L DEM KG+
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 212/503 (42%), Gaps = 100/503 (19%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
Y V A K G +++A+ + +E+ I + + T+L+ GYC L A +FN M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG------- 137
+ +G PD V ++V+ C+N E AI + M+S + P+S +I+G
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESP 431
Query: 138 ---------------------------LCSVGKVGEAEAHFNRLQDKSVE----IYSAMV 166
C GKV A + ++ K +E Y+ M+
Sbjct: 432 EAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 167 NGYCEASN------------------NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
+C N NN Y I G+ K + A+++ +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS-------ILIDGFFKNKDEQNAWDVINQ 544
Query: 209 LSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCHVG 267
++ A E ++ LC VG KA ++L+ + + S Y+ ++D VG
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYC---RM----------------------- 301
T A + G +P+VVT+T++IN +C RM
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 302 ---------NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
N +K A LF ++ G+ P+V Y L+ G F+N +D +++ M
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG-FRNLGKMDAAIDLYKKMVN 723
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
IS D+ Y+ +I+GL+K N A L+ +++D G+ PD++ + +++ KKG +
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK 783
Query: 413 ASELLDEMSSKGMTPSSHIISAV 435
AS++L+EM K +TP+ + S V
Sbjct: 784 ASKMLEEMKKKDVTPNVLLYSTV 806
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 188/418 (44%), Gaps = 22/418 (5%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIKHYTTL 64
+ V F+ G DG+ +++ A CK + A+++ E+R K + + YT++
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I + +GN+ +A + +EM G ++ L G C+ +E A++ F+ ME +G+
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
P+ +++E C ++ +A + R++ + S +V+ +
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ------------- 423
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
G K + E A E+F + S + IA C K+ C G + A L+ M
Sbjct: 424 -------GCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+EP+ + Y+ ++ A C + ARS+F + +G P+ TY+ +I+ + +
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
+ A D+ M + + + Y ++ G K + +K+ S+ Y+
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+I+G +K + + A+ + +M + G P+ VT+T +I+ + K M A E+ EM S
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 38/283 (13%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKL-CLVGDIGKAMKLLETMRS-LNVEPSQIMYS 257
E+A ++F + ++G + F L + C D+ A+ LL MR L V SQ Y+
Sbjct: 256 EEAVKIFRRVMSRG-AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
V+ A G + A + D VG G V+ T+++N YC+ N L +ALDLF M+
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G+ PD + ++V++ KN I R MK I+ V +I G +K ++ E
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR-MKSVRIAPSSVLVHTMIQGCLKAESPEA 433
Query: 378 AIRLFED----------------------------------MIDKGLEPDKVTYTDMISL 403
A+ +F D M KG+EP+ V Y +M+
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+ + M A + EM KG+ P++ S + K + Q
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 28/286 (9%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
KE + +YN + D K+G D A+E E+ ++ +T+LI G+C +
Sbjct: 582 KEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRM 641
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A M +EMK+ K D+ Y L G C+ ++ + A F E+ G+ PN + + +
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I G ++GK+ A + ++ + + Y+ M++G + N
Sbjct: 702 ISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN---------------- 745
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
+ A +L+ EL + G + E L+ L G KA K+LE M+ +V
Sbjct: 746 --------INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
P+ ++YS V+ G A L D + +G D + +++
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/426 (21%), Positives = 180/426 (42%), Gaps = 36/426 (8%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
M +++VD K F G L A+N + +A + ++D A++ L V + Y
Sbjct: 152 MVNNLVDSSKRF---GFELTPRAFNYLLNAYIRNKRMDYAVDCFG-LMVDRKVVPFVPYV 207
Query: 63 TLIKGYCLQGNLID-AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ ++ NLID A ++N+M G D VT +L R + A+ F + S
Sbjct: 208 NNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMS 267
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYCEASNNN 176
G EP+ + ++ C + A ++ K S E Y++++ + + N
Sbjct: 268 RGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN-- 325
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+E+A + E+ G + L+ C ++GK
Sbjct: 326 ----------------------MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGK 363
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+ L M + P ++M+S++++ C + + A + P V TMI
Sbjct: 364 ALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQ 423
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+ S + AL++F D I + + L F +D + + M+Q I
Sbjct: 424 GCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL--FCKQGKVDAATSFLKMMEQKGIE 481
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+VV Y+ ++ + N + A +F +M++KGLEP+ TY+ +I ++K + A ++
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 417 LDEMSS 422
+++M++
Sbjct: 542 INQMNA 547
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
+L+ L I +A ++ M + V + +++ A K + A +F + RG
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRG 269
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMK-RRGIKPDVITYTVLLYGSFKNAAALDV 342
PD + ++ + + C+ L ALDL ++M+ + G+ TYT ++ K +
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ + +M I + V+ + L+NG K + A+ LF M ++GL PDKV ++ M+
Sbjct: 330 VR-VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVE 388
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
+ K M++A E M S + PSS ++ + + LKA
Sbjct: 389 WFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKA 428
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D + E + G+ D + + ++ + L K G+ A +M EE++ K++ ++ Y+T+I G+
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+GNL +AF + +EM KG D +N+L +G A I++ E
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPE 862
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
MD+ +D +K+ G+ D Y + D L K G ++ A ++ EL I D +
Sbjct: 711 MDA-AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
L+ G +G + A M EMK K P+++ Y+ + AG R A DEM
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 123 GVEPNSTTHKMIIEG 137
G+ + T +++ G
Sbjct: 830 GIVHDDTVFNLLVSG 844
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 194/434 (44%), Gaps = 71/434 (16%)
Query: 11 FKEFKESGMFLDG-VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYC 69
F+ +SG+ + V Y + ALC+LGKVD+ ++ L + + D Y+ I GY
Sbjct: 194 FESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYF 253
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
G L+DA EM KG D+V+Y++L G+ + A+ +M +GVEPN
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSP 185
T+ II GLC +GK+ EA FNR+ +E+ Y +++G C N N
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLN--------- 364
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+A+ + ++ +G
Sbjct: 365 ---------------RAFSMLGDMEQRG-------------------------------- 377
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
++PS + Y+ V++ LC G+ A V +G DV+TY+T+++SY ++ ++
Sbjct: 378 ---IQPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNID 429
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
L++ + I D++ +LL +F A + ++R M + +++ D Y+ +
Sbjct: 430 AVLEIRRRFLEAKIPMDLVMCNILL-KAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I G KT E+A+ +F ++ K V Y +I KKG++ A+E+L E+ KG+
Sbjct: 489 IKGYCKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 426 TPSSHIISAVNRSI 439
H + SI
Sbjct: 548 YLDIHTSRTLLHSI 561
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 229/510 (44%), Gaps = 83/510 (16%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + + +E E GM D V+Y+I+ D L K G V++A+ + ++ + ++ ++ YT +I
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+G C G L +AF +FN + + G + D Y L G+CR A + +ME G++
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN------NNY 179
P+ T+ +I GLC G+V EA+ ++ V YS +++ Y + N + +
Sbjct: 380 PSILTYNTVINGLCMAGRVSEAD-EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 180 GDDKSPTPISEVG-YCKVDLVEKAY---ELFLELSNKGDIAKEESCFKLLTK-LCLVGDI 234
+ K P + K L+ AY + + D+ + + + + K C G I
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+A+++ +R +V + + Y+ ++DALC G A + +G D+ T T+
Sbjct: 499 EEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL 557
Query: 295 INS-----------------------------------YCRMNSLKEALDLFQDMKRRGI 319
++S C+ S + A++++ M+R+G+
Sbjct: 558 LHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGL 617
Query: 320 KP----------------------------------DVITYTVLLYGSFKNAAALDVINT 345
DVI YT+++ G K + +N
Sbjct: 618 TVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALN- 676
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+ K ++L+ + Y+ LINGL + +A+RLF+ + + GL P +VTY +I
Sbjct: 677 LCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLC 736
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAV 435
K+GL +A +LLD M SKG+ P+ I +++
Sbjct: 737 KEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 209/516 (40%), Gaps = 114/516 (22%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
+ Y + LCK+GK+++A + + I++D Y TLI G C +GNL AF M +
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 84 MKNKGFKPDIVTYNVLAAGVC---RNDEA--------------------RVAINNFD--- 117
M+ +G +P I+TYN + G+C R EA + + N D
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVL 432
Query: 118 EMESDGVEP----NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGY 169
E+ +E + ++++ +G GEA+A + + + + Y+ M+ GY
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 170 CEASNNNNN---YGDDKSPTPISEVGY-------CKVDLVEKAYELFLEL---------- 209
C+ + + + + + V Y CK +++ A E+ +EL
Sbjct: 493 CKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIH 552
Query: 210 ----------SNKGDIA-----------KEESCFKLLTK----LCLVGDIGKAMKLLETM 244
+N GD + C +L LC G A+++ M
Sbjct: 553 TSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIM 612
Query: 245 R--SLNVE-PSQIM-------------------------------YSIVLDALCHVGKTK 270
R L V PS I+ Y+I+++ LC G
Sbjct: 613 RRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLV 672
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
A +L RG T + +TY ++IN C+ L EAL LF ++ G+ P +TY +L+
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 331 YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL 390
K LD + M + +++ Y+ +++G K EDA+R+ + +
Sbjct: 733 DNLCKEGLFLDA-EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRV 791
Query: 391 EPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
PD T + MI Y KKG M+EA + E K ++
Sbjct: 792 TPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 172/410 (41%), Gaps = 72/410 (17%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKG--FKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
+ +LI + +G + +A + M NK + D + + +G C+ + +A+ F+
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES 196
Query: 119 MESDGV-EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEAS 173
GV PN T+ ++ LC +GKV E RL+D+ E YS ++GY +
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG 256
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+ D+ ++VEK N+ D+ L+K G+
Sbjct: 257 ALVDALMQDR-------------EMVEKGM-------NR-DVVSYSILIDGLSK---EGN 292
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +A+ LL M VEP+ I Y+ ++ LC +GK + A LF+ + G D Y T
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I+ CR +L A + DM++RGI+P ++TY ++ G + D
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA------DEVSK 406
Query: 354 EISLDVVCYSVLINGLMKTDN-----------------------------------YEDA 378
+ DV+ YS L++ +K N Y +A
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEA 466
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L+ M + L PD TY MI Y K G ++EA E+ +E+ ++ +
Sbjct: 467 DALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA 516
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 195/456 (42%), Gaps = 53/456 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ F E ++S + V YN + DALCK G +D A E+ EL K + LDI
Sbjct: 496 GQIEEALEMFNELRKSSVS-AAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTS 554
Query: 62 TTLIKGYCLQGN---LIDAFYMFNEMKNK---GFKPDIVTYNVLAAGVCRNDEARVAINN 115
TL+ G ++ Y ++ + G D + +C+ AI
Sbjct: 555 RTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILL------LCKRGSFEAAIEV 608
Query: 116 FDEMESDG--VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
+ M G V ST K +++ L +S++ Y +VN A
Sbjct: 609 YMIMRRKGLTVTFPSTILKTLVDNL------------------RSLDAYLLVVN----AG 646
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+ D T I G CK + KA L ++G + L+ LC G
Sbjct: 647 ETTLSSMDVIDYTIIIN-GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGC 705
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +A++L +++ ++ + PS++ Y I++D LC G A L DS V +G P+++ Y +
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+++ YC++ ++A+ + + PD T + ++ G K + + +++ + K
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEAL-SVFTEFKDK 824
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDM------------IDKGLEPDKVTYTDMI 401
IS D + LI G E+A L +M +D L + ++
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLV 884
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
L ++G + +A ++LDE+SS + PS + + R
Sbjct: 885 EL-CEQGRVPQAIKILDEISST-IYPSGKNLGSYQR 918
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 2/227 (0%)
Query: 221 CFKLLTKLCLVGDIGKAMKLLET-MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
C +++ C +G A+ E+ + S + P+ + Y+ ++ ALC +GK R L
Sbjct: 174 CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL 233
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
GF D V Y+ I+ Y + +L +AL ++M +G+ DV++Y++L+ G K
Sbjct: 234 EDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNV 293
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ + + + +K+ + +++ Y+ +I GL K E+A LF ++ G+E D+ Y
Sbjct: 294 EEALGLLGKMIKEG-VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+I +KG + A +L +M +G+ PS + V + A +V
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG--FTPDVVTYTTMINS 297
L + +R+ PS + + ++ G+ +A + + + + D + +I+
Sbjct: 121 LRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISG 180
Query: 298 YCRMNSLKEALDLFQDMKRRGI-KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+C++ + AL F+ G+ P+++TYT L+ + +D + + R ++
Sbjct: 181 FCKIGKPELALGFFESAVDSGVLVPNLVTYTTLV-SALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D V YS I+G K DA+ +M++KG+ D V+Y+ +I K+G ++EA L
Sbjct: 240 FDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGL 299
Query: 417 LDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
L +M +G+ P+ +A+ R + K K++
Sbjct: 300 LGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 205/441 (46%), Gaps = 28/441 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G+ LD V ++ D K G + A + + + + I ++ YT LIKG C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + +AF M+ ++ +G +P IVTY+ L G C+ R +++M G P+
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN-------- 178
+ ++++GL G + A ++ +S+ +++++++G+C + +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 179 -YG---DDKSPTPISEV-----GYCKVDLVEKAYELF-LELSNK--GDIAKEESCFKLLT 226
YG D + T + V +CK +LF L NK DIA LL
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
K + D A K + +EP + Y+ ++ C + + A +F+ F P
Sbjct: 584 KCHRIED---ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+ VT T +I+ C+ N + A+ +F M +G KP+ +TY L+ F + ++ +
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM-DWFSKSVDIEGSFKL 699
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ +M++ IS +V YS++I+GL K ++A +F ID L PD V Y +I Y K
Sbjct: 700 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 759
Query: 407 KGLMKEASELLDEMSSKGMTP 427
G + EA+ L + M G+ P
Sbjct: 760 VGRLVEAALLYEHMLRNGVKP 780
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 203/426 (47%), Gaps = 22/426 (5%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V + + + CK G++D A ++ + + + I+ D+ Y+TLI GY G L +F++
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQ 346
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
+KG K D+V ++ ++ + A + M G+ PN T+ ++I+GLC G+
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG--DD--KSPTPISEV---- 191
+ EA + ++ + +E YS++++G+C+ N + + +D K P V
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 192 ---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
G K L+ A +++ + L+ C + +A+K+ M
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 249 VEPSQIMYSIVL------DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
++P ++ V+ DA C K LFD + D+ +I+ + +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
+++A F ++ ++PD++TY ++ G + + LD I+ +K T + V
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICG-YCSLRRLDEAERIFELLKVTPFGPNTVTL 645
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
++LI+ L K ++ + AIR+F M +KG +P+ VTY ++ + K ++ + +L +EM
Sbjct: 646 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Query: 423 KGMTPS 428
KG++PS
Sbjct: 706 KGISPS 711
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 191/433 (44%), Gaps = 28/433 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+K G+ + V Y I+ LC+ G++ +A M ++ + ++ I Y++LI G+C
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GNL F ++ +M G+ PD+V Y VL G+ + A+ +M + N
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT---- 186
+I+G C + + EA F + ++ A S + + PT
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 187 --------PIS-EVGYCKVDL--------VEKAYELF---LELSNKGDIAKEESCFKLLT 226
IS ++ C V + +E A + F +E + DI + ++
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT---MIC 615
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
C + + +A ++ E ++ P+ + +I++ LC A +F +G P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+ VTY +++ + + ++ + LF++M+ +GI P +++Y++++ G K +D I
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR-VDEATNI 734
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ ++ DVV Y++LI G K +A L+E M+ G++PD + +
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPP 794
Query: 407 KGLMKEASELLDE 419
K LM + + D+
Sbjct: 795 KWLMSKGVWVHDK 807
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 196/447 (43%), Gaps = 76/447 (17%)
Query: 4 DSDVVDKFKEFKESGMF----LDGVAYNIVFDALCKLGKVDDAIEM---REELRV----- 51
D + ++ K+F G LD + + C+ G VD A+E+ +L V
Sbjct: 123 DEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQD 182
Query: 52 ------------KNIDLDIKHYTTLIKG------YCLQGNLIDAFYMFNEMKN------- 86
+DL H+ L +G G ++DA + E+
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRL 242
Query: 87 ---KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
+GF+ IV+ N + G+ D+ VA + G PN T +I G C G+
Sbjct: 243 VMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+ A F ++ + +E YS +++GY +A ++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG------------------------ML 337
Query: 200 EKAYELFLELSNKG---DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
++LF + +KG D+ S + K GD+ A + + M + P+ + Y
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVK---SGDLATASVVYKRMLCQGISPNVVTY 394
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I++ LC G+ A ++ + RG P +VTY+++I+ +C+ +L+ L++DM +
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G PDV+ Y VL+ G K L + + + Q+ I L+VV ++ LI+G + + ++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVVFNSLIDGWCRLNRFD 513
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISL 403
+A+++F M G++PD T+T ++ +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRV 540
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 101/233 (43%), Gaps = 38/233 (16%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
C+ +V+KA E+F+ + G + ++S +++L L + + + +EPS
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 254 I-MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ + VLDAL +C+ + +ALD +
Sbjct: 217 VSAHGFVLDAL----------------------------------FCK-GEVTKALDFHR 241
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
+ RG + +++ +L G + ++V + + + + +VV + LING K
Sbjct: 242 LVMERGFRVGIVSCNKVLKG--LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKR 299
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+ A LF+ M +G+EPD + Y+ +I Y+K G++ +L + KG+
Sbjct: 300 GEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 19/443 (4%)
Query: 14 FKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN 73
++S ++ + +NI+ L K G+VDD +++ E ++ + D+ Y++LI G C GN
Sbjct: 246 LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGN 305
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
+ A +FNE+ + D+VTYN + G CR + + ++ + ME N ++ +
Sbjct: 306 VDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNI 364
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD----DKSP 185
+I+GL GK+ EA + + K Y ++G C N G + S
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 186 TPISEVGY-------CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
+ Y CK +E+A L E+S G C L+ L +G+A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
L M P+ + Y+I++ LC GK A + + G+ PD+ TY+ ++
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
CR + AL+L+ + G++ DV+ + +L++G + LD T+ +M+ + +
Sbjct: 545 CRDRKIDLALELWHQFLQSGLETDVMMHNILIHG-LCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY-TDMISLYYKKGLMKEASELL 417
+V Y+ L+ G K + A ++ M GL+PD ++Y T M L +G+ A E
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV-SYAMEFF 662
Query: 418 DEMSSKGMTPSSHIISAVNRSIL 440
D+ + G+ P+ + + + R+++
Sbjct: 663 DDARNHGIFPTVYTWNILVRAVV 685
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 222/522 (42%), Gaps = 86/522 (16%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F F+ +G+ + YN++ CK + + A + + + D+ Y+T+I
Sbjct: 137 FAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAK 196
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE-MESDGVEPNST 129
G L DA +F+EM +G PD+ YN+L G + + + A+ +D +E V PN
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRL----QDKSVEIYSAMVNGYCEASNNN------NNY 179
TH ++I GL G+V + + R+ ++K + YS++++G C+A N + N
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 180 GDDKSPTPISEV-----GYCKVDLVEKAYELFLELSNK------------------GDIA 216
+ K+ + G+C+ ++++ EL+ + +K G I
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKID 376
Query: 217 KEESCFKLLTK----------------LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
+ ++L+ LC+ G + KA+ +++ + S Y+ ++
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 261 DALCHVGKTKHARSLF------------------------DSFVGR-----------GFT 285
D LC + + A +L DS +G G
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
P VV+Y +I C+ EA ++M G KPD+ TY++LL G ++ +D+
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD-RKIDLALE 555
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+W Q+ + DV+ +++LI+GL +DA+ + +M + + VTY ++ ++
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQF 447
K G A+ + M G+ P + + + + R V +
Sbjct: 616 KVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 189/414 (45%), Gaps = 44/414 (10%)
Query: 40 DDAIEMREELR-VKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNV 98
D A+++ + +R + + I+ Y TL+ + + +F + G P++ TYNV
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 99 LAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS 158
L C+ E A D M +G +P+ ++ +I L GK+ +A F+ + ++
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 159 VE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGD 214
V Y+ +++G+ L EK ++ +EL ++
Sbjct: 215 VAPDVTCYNILIDGF----------------------------LKEKDHKTAMELWDR-- 244
Query: 215 IAKEESCFK-------LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG 267
+ ++ S + +++ L G + +K+ E M+ E YS ++ LC G
Sbjct: 245 LLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAG 304
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT 327
A S+F+ R + DVVTY TM+ +CR +KE+L+L++ M+ + ++++Y
Sbjct: 305 NVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYN 363
Query: 328 VLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+L+ G +N +D IWR M + D Y + I+GL A+ + +++
Sbjct: 364 ILIKGLLENGK-IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
G D Y +I KK ++EAS L+ EMS G+ +SH+ +A+ +++
Sbjct: 423 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 20/286 (6%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+E + SG LD AY + D LCK ++++A + +E+ ++L+ LI G
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
L +A + EM G +P +V+YN+L G+C+ + A EM +G +P+ T+
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+++ GLC +R D ++E++ + E +N I
Sbjct: 538 SILLCGLCR-----------DRKIDLALELWHQFLQSGLETDVMMHN---------ILIH 577
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
G C V ++ A + + ++ A + L+ VGD +A + M + ++P
Sbjct: 578 GLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQP 637
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
I Y+ ++ LC +A FD G P V T+ ++ +
Sbjct: 638 DIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 69/128 (53%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ +F +SG+ D + +NI+ LC +GK+DDA+ + + +N ++ Y TL++G+
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G+ A ++ M G +PDI++YN + G+C A+ FD+ + G+ P T
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 131 HKMIIEGL 138
+++ +
Sbjct: 677 WNILVRAV 684
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 188/407 (46%), Gaps = 29/407 (7%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
Y I LC+ K+++A +M E ++ + ++ Y+ +I GYC GN+ A+ ++ E+
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
P++V + L G C+ E A + F M GV+PN + +I G C G +
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 146 EAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
EA + ++ V Y+ ++NG C D V +
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIE------------------------DQVAE 392
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A LF ++ N+ + L+ C ++ +A+ L M + VEP+ I +S ++D
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
C+V K A L+ +G PDVVTYT +I+++ + ++KEAL L+ DM GI P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ T+ L+ G +K L V +++ Q + V ++ LI GL + A R
Sbjct: 513 NDHTFACLVDGFWKE-GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
F DM G+ PD +Y M+ + ++ + + L +M G+ P+
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 192/436 (44%), Gaps = 57/436 (13%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+S F GV ++ + L ++G ++A+ + E++ D K +++ G +
Sbjct: 126 QSPKFSIGVFSLLIMEFL-EMGLFEEALWVSREMKCSP---DSKACLSILNGLVRRRRFD 181
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
+ + M ++G PD+ Y VL + DEM S G++PN + + I
Sbjct: 182 SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYI 241
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
LC K+ EAE F ++ V YSAM++GYC+ N YG K ++E+
Sbjct: 242 LDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE-ILVAEL 300
Query: 192 ------------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
G+CK + A LF+ + G L+ C G++ +A+
Sbjct: 301 LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVG 360
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
LL M SLN+ P Y+I+++ LC + A LF P TY ++I+ YC
Sbjct: 361 LLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYC 420
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+ ++++ALDL +M G++P++IT+
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITF--------------------------------- 447
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
S LI+G + + A+ L+ +M KG+ PD VTYT +I ++K+ MKEA L +
Sbjct: 448 ---STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSD 504
Query: 420 MSSKGMTPSSHIISAV 435
M G+ P+ H + +
Sbjct: 505 MLEAGIHPNDHTFACL 520
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 133/325 (40%), Gaps = 57/325 (17%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ V E + + D Y I+ + LC +V +A + ++++ + I Y +LI
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
GYC + N+ A + +EM G +P+I+T++ L G C + + A+ + EM G+
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-SVEIYSAMVNGYCEASNNNNNYGDDKS 184
P+ T+ +I +AHF K ++ +YS M+ EA + N++
Sbjct: 477 PDVVTYTALI------------DAHFKEANMKEALRLYSDML----EAGIHPNDH----- 515
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
C VD K L + + + ++ SC+ + CL+
Sbjct: 516 ------TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI------------- 556
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+ LC G A F G TPD+ +Y +M+ + + +
Sbjct: 557 ----------------EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 305 KEALDLFQDMKRRGIKPDVITYTVL 329
+ + L DM + GI P+++ +L
Sbjct: 601 TDTMMLQCDMIKTGILPNLLVNQLL 625
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 1/161 (0%)
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+PD +++N R +Q M RG+ PDV Y VL FK
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGL-YSKKE 219
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+ +M I +V Y++ I L + + E+A ++FE M G+ P+ TY+ MI Y
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGY 279
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
K G +++A L E+ + P+ + + KAR++
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAREL 320
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 236 KAMKLLETMRSLNVEPSQIM--YSIVLDALCHVGKTKHARSLFDSFV---GRGFTPDVVT 290
+A KL ET V S + +S V+ L K AR L S + R P ++
Sbjct: 56 EAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMS 115
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW--R 348
+ + N+ + S K ++ +F ++ L G F+ A +W R
Sbjct: 116 HR-LFNALEDIQSPKFSIGVF----------SLLIMEFLEMGLFEEA--------LWVSR 156
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+MK + S C S+L NGL++ ++ ++ MI +GL PD Y + +K+G
Sbjct: 157 EMKCSPDS--KACLSIL-NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213
Query: 409 LMKEASELLDEMSSKGMTPSSHI 431
L + +LLDEM+S G+ P+ +I
Sbjct: 214 LYSKKEKLLDEMTSLGIKPNVYI 236
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 205/421 (48%), Gaps = 35/421 (8%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V++N +F+ K+ K+ D + + + +K ++ Y+T I +C G L A F
Sbjct: 128 DIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSF 186
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ MK P++VT+ L G C+ + VA++ + EM + N T+ +I+G C
Sbjct: 187 HSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKK 246
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
G++ AE ++R+ + VE +Y+ +++G+ + +++N
Sbjct: 247 GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN-------------------- 286
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
A + ++ N+G + +++ LC G + +A +++E M ++ P ++++
Sbjct: 287 ----AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+++A G+ K A +++ + RGF PDVV +TMI+ + L EA+ F
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE--- 399
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
K + + YTVL+ K ++V ++ + + + D Y+ I GL K N D
Sbjct: 400 --KANDVMYTVLIDALCKEGDFIEV-ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A +L M+ +GL D + YT +I KGLM EA ++ DEM + G++P S + + R
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 438 S 438
+
Sbjct: 517 A 517
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 180/428 (42%), Gaps = 72/428 (16%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V Y+ D CK G++ A++ ++ + ++ +T LI GYC G+L A ++ E
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M+ ++VTY L G C+ E + A + M D VEPNS + II+G G
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 144 VGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPISE--------- 190
A ++ ++ + + Y +++G C G K T I E
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLC-------GNGKLKEATEIVEDMEKSDLVP 336
Query: 191 ---------VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
Y K ++ A ++ +L +G E L T ++ I K +L
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG---FEPDVVALST---MIDGIAKNGQLH 390
Query: 242 ETMRSLNVEPSQ-IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E + +E + +MY++++DALC G LF G PD YT+ I C+
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+L +A L M + G+ D++ YT L+YG
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG---------------------------- 482
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
+ GLM +A ++F++M++ G+ PD + +I Y K+G M AS+LL +M
Sbjct: 483 ---LASKGLMV-----EARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534
Query: 421 SSKGMTPS 428
+G+ +
Sbjct: 535 QRRGLVTA 542
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 178/391 (45%), Gaps = 25/391 (6%)
Query: 59 KHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
KH LI C G L F + + ++G+ P ++N + + VC+ + + A +
Sbjct: 26 KHIHQLINSNC--GILSLKFLAY--LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHS 81
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
M G EP+ ++ +I+G C G + A L+ I + + N
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFN---- 137
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
G+ K+ ++++ + +++ + K + + C G++ A+
Sbjct: 138 -------------GFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
K +M+ + P+ + ++ ++D C G + A SL+ + +VVTYT +I+ +
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
C+ ++ A +++ M ++P+ + YT ++ G F+ + + + + + + Q + LD
Sbjct: 244 CKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG-MRLD 302
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
+ Y V+I+GL ++A + EDM L PD V +T M++ Y+K G MK A +
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 419 EMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
++ +G P +S + I A+ Q HE
Sbjct: 363 KLIERGFEPDVVALSTMIDGI--AKNGQLHE 391
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 10/322 (3%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
V +KE + M L+ V Y + D CK G++ A EM + ++ + YTT+I G
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG 277
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
+ +G+ +A +M N+G + DI Y V+ +G+C N + + A ++ME + P+
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPD 337
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNN---YG 180
++ G++ A +++L ++ E S M++G + + +
Sbjct: 338 MVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 181 DDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+K+ + V CK + LF ++S G + + + LC G++ A
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
KL M + + Y+ ++ L G AR +FD + G +PD + +I +
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 298 YCRMNSLKEALDLFQDMKRRGI 319
Y + ++ A DL DM+RRG+
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGL 539
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+V +A + L ++ +C K + +L ++K L + S P + ++
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
V+ +C +G+ K A + S G PDV++Y ++I+ +CR ++ A + + ++
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 318 G---IKPDVITYTVLLYGSFKNAAALD-----------------VINTIWRD-------- 349
KPD++++ L G F LD V + W D
Sbjct: 121 HGFICKPDIVSFNSLFNG-FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 350 ---------MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
MK+ +S +VV ++ LI+G K + E A+ L+++M + + VTYT +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
I + KKG M+ A E+ M + P+S + + +
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 203/448 (45%), Gaps = 61/448 (13%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ L+ V YN + + +G V+ + + + + ++ YT+LIKGYC +G + +A
Sbjct: 256 GLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA 315
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
++F +K K D Y VL G CR + R A+ D M GV N+T +I G
Sbjct: 316 EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
Query: 138 LCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDD----------K 183
C G++ EAE F+R+ D S++ Y+ +V+GYC A Y D+ K
Sbjct: 376 YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG-----YVDEALKLCDQMCQK 430
Query: 184 SPTP------ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
P I GY ++ L+ + +G A E SC LL L +GD +A
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
MKL E + + + I ++++ LC + K A+ + D+ P V TY + +
Sbjct: 491 MKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHG 550
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
Y ++ +LKEA + + M+R+GI P + Y L+ G+FK +R + +
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK-----------YRHLNKVA--- 596
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
D+V ++ +GL P TY +I+ + G++ +A
Sbjct: 597 DLVI----------------------ELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 418 DEMSSKGMTPSSHIISAVNRSILKARKV 445
EM KG+T + +I S + S+ + K+
Sbjct: 635 FEMIEKGITLNVNICSKIANSLFRLDKI 662
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 195/397 (49%), Gaps = 17/397 (4%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ ++K Y +G + +A ++F+ M N G P +++ N L + + R E VA++ +D+M
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEA-----EAHFNRLQDKSVEIYSAMVNGYCEASNN 175
S V P+ T +++ C G V +A E + + +V Y++++NGY +
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 176 N---------NNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ G ++ + + GYCK L+E+A +F L K +A + L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+ C G I A+++ + M + V + + + +++ C G+ A +F
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
PD TY T+++ YCR + EAL L M ++ + P V+TY +LL G + A DV+
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL- 456
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++W+ M + ++ D + S L+ L K ++ +A++L+E+++ +GL D +T MIS
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
K + EA E+LD ++ P+ A++ K
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 201/474 (42%), Gaps = 57/474 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + + D YN + D C+ G VD+A+++ +++ K + + Y L+KGY
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G D ++ M +G D ++ + L + + + A+ ++ + + G+ ++ T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNN-----NNYGD 181
++I GLC + KV EA+ + + +V+ Y A+ +GY + N Y +
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 182 DKSPTPISEV-----------------------------------------GYCKVDLVE 200
K P E+ G+C + +++
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE-PSQIMYSIV 259
KAY E+ KG C K+ L + I +A LL+ + ++ P
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 260 LDALCH--VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM--K 315
L+A + K A S+ +S + P+ + Y I C+ L++A LF D+
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSS 748
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
R I PD TYT+L++G A ++ T+ +M I ++V Y+ LI GL K N
Sbjct: 749 DRFI-PDEYTYTILIHGC-AIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ A RL + KG+ P+ +TY +I K G + EA L ++M KG+ S
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 188/409 (45%), Gaps = 29/409 (7%)
Query: 42 AIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK-GFKPDIVTYNVLA 100
A+ + +++ + D+ + ++ YC GN+ A E ++ G + ++VTYN L
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 101 AGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV- 159
G + M GV N T+ +I+G C G + EAE F L++K +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 160 ---EIYSAMVNGYCEAS---------NNNNNYGDDKSPTPISEV--GYCKVDLVEKAYEL 205
+Y +++GYC +N G + T + + GYCK + +A ++
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
F +++ + L+ C G + +A+KL + M V P+ + Y+I+L
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
+G SL+ + RG D ++ +T++ + ++ EA+ L++++ RG+ D IT
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 326 YTVLLYGSFK----NAAA--LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
V++ G K N A LD +N I+R + Y L +G K N ++A
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVN-IFRCKPAVQT------YQALSHGYYKVGNLKEAF 561
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ E M KG+ P Y +IS +K + + ++L+ E+ ++G+TP+
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 176/390 (45%), Gaps = 29/390 (7%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + F+ KE + D Y ++ D C+ G++ DA+ + + + I++ ++
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM----IEIGVRTN 365
Query: 62 TT----LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
TT LI GYC G L++A +F+ M + KPD TYN L G CR A+ D
Sbjct: 366 TTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCD 425
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
+M V P T+ ++++G +G + + + + + V
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN----------------- 468
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
D+ S + + E + K+ +A +L+ + +G + + +++ LC + + +A
Sbjct: 469 --ADEISCSTLLEALF-KLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
++L+ + +P+ Y + VG K A ++ + +G P + Y T+I+
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
+ L + DL +++ RG+ P V TY L+ G + N +D +M + I+L
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITG-WCNIGMIDKAYATCFEMIEKGITL 644
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+V S + N L + D ++A L + ++D
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFL-DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
G D F + S F+ D Y I+ G ++ A +R+E+ +K I +I
Sbjct: 733 GKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVT 792
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LIKG C GN+ A + +++ KG P+ +TYN L G+ ++ A+ ++M
Sbjct: 793 YNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Query: 121 SDGVEPNSTTH-------KMIIEGLCSVGKVGEAEAHFNRLQD 156
G+ S +++++ +G G E + N L D
Sbjct: 853 EKGLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNSNELYD 895
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 180/407 (44%), Gaps = 29/407 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK KE G V Y + + K+GK+ A+E+ ++ + + ++K Y+ +I G+
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ +AF +F +M +G KPD++ YN + + C AI EM+ P + T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
II G G + + F+ ++ +V ++ ++NG E
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQ------------ 639
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+EKA E+ E++ G A E + K++ VGD GKA + +++
Sbjct: 640 ------------MEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
++ Y +L A C G+ + A ++ R + Y +I+ + R + E
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A DL Q MK+ G+KPD+ TYT + K TI +M+ + ++ Y+ LI
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI-EEMEALGVKPNIKTYTTLI 806
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
G + E A+ +E+M G++PDK Y +++ + + EA
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 193/443 (43%), Gaps = 42/443 (9%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G S ++ + KE G+ + Y+++ + KL +A + E++ + + D+
Sbjct: 497 VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +I +C GN+ A EM+ +P T+ + G ++ + R ++ FD M
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G P T +I GL R +K+VEI M S N + Y
Sbjct: 617 RCGCVPTVHTFNGLINGLVE-----------KRQMEKAVEILDEMT--LAGVSANEHTY- 662
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKG---DIAKEESCFKLLTKLCLVGDIGKA 237
T I + GY V KA+E F L N+G DI E+ LL C G + A
Sbjct: 663 -----TKIMQ-GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEA---LLKACCKSGRMQSA 713
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+ + + M + N+ + +Y+I++D G A L G PD+ TYT+ I++
Sbjct: 714 LAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
+ + A ++M+ G+KP++ TYT L+ G + A+ + + + +MK I
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG-WARASLPEKALSCYEEMKAMGIKP 832
Query: 358 DVVCYSVLINGLMKTDN------YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
D Y L+ L+ + Y + + ++M++ GL D T ++++ K L K
Sbjct: 833 DKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT-----AVHWSKCLCK 887
Query: 412 -EAS-ELLDEMSSKGMTP--SSH 430
EAS L E K P SSH
Sbjct: 888 IEASGGELTETLQKTFPPDWSSH 910
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 191/447 (42%), Gaps = 33/447 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E K L+ Y + A C+ ++ A + E+ + ID I Y T++ GY +
Sbjct: 402 FDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTM 461
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ +F +K GF P +VTY L + + A+ M+ +GV+ N T
Sbjct: 462 VADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKT 521
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
+ M+I G + A A F + + ++ +Y+ +++ +C N
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN------------ 569
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+++A + E+ + ++ GD+ +++++ + MR
Sbjct: 570 ------------MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
P+ ++ +++ L + + A + D G + + TYT ++ Y + +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A + F ++ G+ D+ TY LL K+ + + ++M I + Y++LI
Sbjct: 678 AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL-AVTKEMSARNIPRNSFVYNILI 736
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+G + + +A L + M +G++PD TYT IS K G M A++ ++EM + G+
Sbjct: 737 DGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVK 796
Query: 427 PS----SHIISAVNRSILKARKVQFHE 449
P+ + +I R+ L + + +E
Sbjct: 797 PNIKTYTTLIKGWARASLPEKALSCYE 823
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 187/419 (44%), Gaps = 35/419 (8%)
Query: 35 KLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIV 94
+ G + A E E +R + I + YT+LI Y + ++ +A +MK +G + +V
Sbjct: 321 RRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLV 380
Query: 95 TYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL 154
TY+V+ G + A A FDE + N++ + II C + AEA +
Sbjct: 381 TYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM 440
Query: 155 Q----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELS 210
+ D + IY M++GY ++ + K + C Y + L
Sbjct: 441 EEEGIDAPIAIYHTMMDGYTMVAD------EKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 211 NKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
K VG I KA+++ M+ V+ + YS++++ +
Sbjct: 495 TK------------------VGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+A ++F+ V G PDV+ Y +I+++C M ++ A+ ++M++ +P T+ ++
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 331 YGSFKNA---AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+G K+ +L+V + M++ V ++ LINGL++ E A+ + ++M
Sbjct: 597 HGYAKSGDMRRSLEVFDM----MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
G+ ++ TYT ++ Y G +A E + ++G+ A+ ++ K+ ++Q
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 167/380 (43%), Gaps = 31/380 (8%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ ++K Y +G++ A F M+ +G P Y L + A++ +M+
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFN---RLQDK-SVEIYSAMVNGYCEASNNN 176
+G+E + T+ +I+ G G A+ F+ R+ + IY ++ +C+ N
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN-- 429
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+E+A L E+ +G A ++ +V D K
Sbjct: 430 ----------------------MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKK 467
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
+ + + ++ P+ + Y +++ VGK A + G ++ TY+ MIN
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD-VINTIWRDMKQTEI 355
+ ++ A +F+DM + G+KPDVI Y ++ +F +D I T+ ++M++
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNII-SAFCGMGNMDRAIQTV-KEMQKLRH 585
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ +I+G K+ + ++ +F+ M G P T+ +I+ +K M++A E
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 416 LLDEMSSKGMTPSSHIISAV 435
+LDEM+ G++ + H + +
Sbjct: 646 ILDEMTLAGVSANEHTYTKI 665
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+PS+ + +++ G AR F+ RG TP YT++I++Y + EAL
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+ MK GI+ ++TY+V++ G F A + + + + K+ +L+ Y +I
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIV-GGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY-----KKGLMKEASELLDEMSSKG 424
+T N E A L +M ++G++ Y M+ Y KKGL+ + + G
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECG 479
Query: 425 MTPS 428
TP+
Sbjct: 480 FTPT 483
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 177/376 (47%), Gaps = 23/376 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ E ++G L+ +NI+ + CK G + DA ++ +E+ +++ + + TLI GYC
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GNL + F + ++M+ +PD+ TY+ L +C+ ++ A FDEM G+ PN
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCE-----ASNN------ 175
+I G G++ + + ++ K ++ +Y+ +VNG+C+ A+ N
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
DK G+C+ VE A E+ E+ G L+ +C G +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A + L M ++P + Y++++DA C G + L G P VVTY ++
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N C++ +K A L M G+ PD ITY LL G ++A N+ R +++ EI
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA------NSSKRYIQKPEI 581
Query: 356 SL--DVVCYSVLINGL 369
+ D+ Y ++N L
Sbjct: 582 GIVADLASYKSIVNEL 597
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 53/408 (12%)
Query: 36 LGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID------------AFYMFNE 83
LG + DAI+ R D+ I+ C GNL+D FYM E
Sbjct: 183 LGFIPDAIQCFRLSRKHRFDVPIRG--------C--GNLLDRMMKLNPTGTIWGFYM--E 230
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
+ + GF ++ +N+L C+ A FDE+ ++P + +I G C VG
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 144 VGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+ E ++++ V YSA++N C K + +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALC------------------------KENKM 326
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
+ A+ LF E+ +G I + L+ G+I + + M S ++P ++Y+ +
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
++ C G AR++ D + RG PD +TYTT+I+ +CR ++ AL++ ++M + GI
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
+ D + ++ L+ G K +D + R+M + I D V Y+++++ K + +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERAL-REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+L ++M G P VTY +++ K G MK A LLD M + G+ P
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 176/391 (45%), Gaps = 43/391 (10%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG 88
+ D + KL E+ L++ + L+ +C +GN+ DA +F+E+ +
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDE-------MESDGVEPNSTTHKMIIEGLCSV 141
+P +V++N L G C+ + N DE ME P+ T+ +I LC
Sbjct: 271 LQPTVVSFNTLINGYCK-------VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE 323
Query: 142 GKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
K+ A F+ + + + I++ +++G+ S N ++D
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH---SRNG------------------EID 362
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
L++++Y+ L + DI + L+ C GD+ A +++ M + P +I Y+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNT---LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
++D C G + A + G D V ++ ++ C+ + +A ++M R
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
GIKPD +TYT+++ K A + ++M+ VV Y+VL+NGL K ++
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFK-LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
A L + M++ G+ PD +TY ++ +++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHA 569
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ +++ G+ D V YN + + CK G + A + + + + + D YTTLI G+
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C G++ A + EM G + D V ++ L G+C+ A EM G++P+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQD-------KSVEIYSAMVNGYCEASNNNN 177
T+ M+++ C K G+A+ F L++ SV Y+ ++NG C+ N
Sbjct: 486 VTYTMMMDAFC---KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 89/231 (38%), Gaps = 55/231 (23%)
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
L + ++ G I CF+L K I LL+ M LN P+ ++ ++ L
Sbjct: 176 LMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLN--PTGTIWGFYMEIL- 232
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
GF +V + ++N +C+ ++ +A +F ++ +R ++P V+
Sbjct: 233 ----------------DAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVV 276
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
++ + LING K N ++ RL
Sbjct: 277 SF------------------------------------NTLINGYCKVGNLDEGFRLKHQ 300
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
M PD TY+ +I+ K+ M A L DEM +G+ P+ I + +
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D +E +G+ D V Y ++ DA CK G ++ +E++ + Y L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN 106
G C G + +A + + M N G PD +TYN L G R+
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 16/432 (3%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++ K G+ D YN++ LC+ ++ + ++R + I + Y TLI G
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
+ +G ++ A + NEM + G P+ VT+N L G + A+ F ME+ G+ P+
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEAS---------N 174
++ ++++GLC + A + R++ V + Y+ M++G C+ N
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 175 NNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
+ G D S + G+CKV + A E+ + G L+ C +G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ +A+++ E M +++++ +LC GK A G P+ V++
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+IN Y +A +F +M + G P TY LL G K L + +
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK-GGHLREAEKFLKSLHA 646
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
++D V Y+ L+ + K+ N A+ LF +M+ + + PD TYT +IS +KG
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 706
Query: 413 ASELLDEMSSKG 424
A E ++G
Sbjct: 707 AILFAKEAEARG 718
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 39/437 (8%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM D ++ F+ G N + ++ K G+ +E+ + I D+ +
Sbjct: 177 GMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATF 236
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LI C +G+ + Y+ +M+ G+ P IVTYN + C+ + AI D M+S
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
GV+ + T+ M+I LC ++ + ++ + + Y+ ++NG+ +
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF-------S 349
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
N G V A +L E+ + G + L+ G+ +A
Sbjct: 350 NEGK-----------------VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+K+ M + + PS++ Y ++LD LC + AR + G +TYT MI+
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQ 352
C+ L EA+ L +M + GI PD++TY+ L+ G FK A +++ I+R
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK--EIVCRIYR---- 506
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+S + + YS LI + ++AIR++E MI +G D T+ +++ K G + E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566
Query: 413 ASELLDEMSSKGMTPSS 429
A E + M+S G+ P++
Sbjct: 567 AEEFMRCMTSDGILPNT 583
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 180/415 (43%), Gaps = 29/415 (6%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
++ ++SG V YN V CK G+ AIE+ + ++ K +D D+ Y LI C
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 316
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
+ + + +M+ + P+ VTYN L G + +A +EM S G+ PN T
Sbjct: 317 NRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 376
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+I+G S G EA F ++ K + +P+ +S
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGL------------------------TPSEVSYG 412
Query: 192 ----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
G CK + A ++ + G + ++ LC G + +A+ LL M
Sbjct: 413 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 472
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
++P + YS +++ C VG+ K A+ + G +P+ + Y+T+I + CRM LKEA
Sbjct: 473 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+ +++ M G D T+ VL+ S A + R M I + V + LIN
Sbjct: 533 IRIYEAMILEGHTRDHFTFNVLVT-SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
G + A +F++M G P TY ++ K G ++EA + L + +
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 29/379 (7%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI+ Y +G + D+ +F M GF P + T N + V ++ E + EM
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
+ P+ T ++I LC+ G E ++ + +KS GY
Sbjct: 226 KRKICPDVATFNILINVLCAEGSF-EKSSYLMQKMEKS---------GY----------- 264
Query: 181 DDKSPTPISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+PT ++ YCK + A EL + +KG A + L+ LC I K
Sbjct: 265 ---APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
LL MR + P+++ Y+ +++ + GK A L + + G +P+ VT+ +I+
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+ + KEAL +F M+ +G+ P ++Y VLL G KN A D+ + MK+ +
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKN-AEFDLARGFYMRMKRNGVC 440
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+ + Y+ +I+GL K ++A+ L +M G++PD VTY+ +I+ + K G K A E+
Sbjct: 441 VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 417 LDEMSSKGMTPSSHIISAV 435
+ + G++P+ I S +
Sbjct: 501 VCRIYRVGLSPNGIIYSTL 519
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 179/423 (42%), Gaps = 65/423 (15%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ K +G+ + + Y + D LCK G +D+A+ + E+ ID DI Y+ LI G+C
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 490
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G A + + G P+ + Y+ L CR + AI ++ M +G + T
Sbjct: 491 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT 550
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPT 186
+++ LC GKV EAE + + + ++NGY N G+
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY-------GNSGEGL--- 600
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
KA+ +F E++ G + LL LC G + +A K L+++ +
Sbjct: 601 --------------KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ +MY+ +L A+C G A SLF V R PD TYT++I+ CR
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVI 706
Query: 307 ALDLFQDMKRRG-IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
A+ ++ + RG + P+ + YT C+
Sbjct: 707 AILFAKEAEARGNVLPNKVMYT---------------------------------CF--- 730
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
++G+ K ++ I E M + G PD VT MI Y + G +++ ++LL EM ++
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 426 TPS 428
P+
Sbjct: 791 GPN 793
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 201/489 (41%), Gaps = 55/489 (11%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + G Y + LCK G + +A + + L +D Y TL+ C
Sbjct: 606 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG-VEPNST 129
GNL A +F EM + PD TY L +G+CR + +AI E E+ G V PN
Sbjct: 666 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 725
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYC-----EASNN---- 175
+ ++G+ G+ +A +F D + +AM++GY E +N+
Sbjct: 726 MYTCFVDGMFKAGQ-WKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE 784
Query: 176 --NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL--------- 224
N N G + + I GY K V ++ L+ + G + + +C L
Sbjct: 785 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844
Query: 225 --------------------------LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
++K C G+I A L++ M SL + +
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++ L + + +R + +G +P+ Y +IN CR+ +K A + ++M
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
I P + + ++ K A D + R M + ++ + ++ L++ K N +A
Sbjct: 965 ICPPNVAESAMVRALAKCGKA-DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA 1023
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRS 438
+ L M + GL+ D V+Y +I+ KG M A EL +EM G ++ A+ R
Sbjct: 1024 LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
Query: 439 ILKARKVQF 447
+L AR+ F
Sbjct: 1084 LL-ARETAF 1091
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 196/463 (42%), Gaps = 23/463 (4%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG + + ++ G D +N++ +LCK GKV +A E + I +
Sbjct: 526 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 585
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ LI GY G + AF +F+EM G P TY L G+C+ R A +
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNN- 175
+ ++ + ++ +C G + +A + F + +S+ Y+++++G C
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705
Query: 176 ----NNNYGDDKSPTPISEVGY-CKVDLVEKAYEL-----FLE-LSNKGDIAKEESCFKL 224
+ + ++V Y C VD + KA + F E + N G + +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+ +G I K LL M + N P+ Y+I+L + L+ S + G
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALD 341
PD +T +++ C N L+ L + + RG++ D T+ +L+ N A D
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
++ M ISLD +++ L + ++++ + +M +G+ P+ Y +I
Sbjct: 886 LVKV----MTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
+ + G +K A + +EM + + P + SA+ R++ K K
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 159/371 (42%), Gaps = 24/371 (6%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V N + D ++GK++ ++ E+ +N ++ Y L+ GY + ++ +F ++
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+ G PD +T + L G+C ++ + + GVE + T M+I C+
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
G++ A + + + + N N+ + + +
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRM----------------- 920
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
+ E+S +G + L+ LC VGDI A + E M + + P + S ++
Sbjct: 921 ---VLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
AL GK A L + P + ++TT+++ C+ ++ EAL+L M G+K
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037
Query: 322 DVITYTVLLYG-SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN-YEDAI 379
D+++Y VL+ G K AL ++ +MK + Y LI GL+ + + A
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAF--ELYEEMKGDGFLANATTYKALIRGLLARETAFSGAD 1095
Query: 380 RLFEDMIDKGL 390
+ +D++ +G
Sbjct: 1096 IILKDLLARGF 1106
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
L+ T R N PS +Y I++ G + + +F GF P V T ++ S
Sbjct: 152 LMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKN-------------AAALD 341
+ ++M +R I PDV T+ +L+ GSF+ A +
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269
Query: 342 VINTI--WR--------------DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
NT+ W MK + DV Y++LI+ L +++ L DM
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ + P++VTY +I+ + +G + AS+LL+EM S G++P+ +A+
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 210/484 (43%), Gaps = 63/484 (13%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + V F E + S + YN L + + + A + +++ L Y
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 62 TTLIKGYCL--QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ I G C + +LIDA + ++M+ GF PDI +NV +CR ++ A+ F M
Sbjct: 83 SRFISGLCKVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY 179
G EP+ ++ ++I GL GKV +A VEI++AM+ +
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDA-----------VEIWNAMIR---------SGV 180
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAM 238
D VG C V+ AYE+ E + + L++ C G I KA
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE 240
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV------------------ 280
L M + EP + Y+++L+ K A + V
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 281 ------------------GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
RGF DVV+Y+T+I ++CR ++ ++A LF++M+++G+ +
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN 359
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
V+TYT L+ +F V + M + +S D + Y+ +++ L K+ N + A +F
Sbjct: 360 VVTYTSLI-KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVF 418
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
DMI+ + PD ++Y +IS + G + EA +L ++M K P + +++
Sbjct: 419 NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRG 478
Query: 443 RKVQ 446
+K+
Sbjct: 479 KKLS 482
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 199/441 (45%), Gaps = 35/441 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ + K G L Y+ LCK+ K D + ++ DI + + C
Sbjct: 67 YWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCR 126
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ + A F M +G +PD+V+Y +L G+ R + A+ ++ M GV P++
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 131 HKMIIEGLCSVGKVGEA------EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
++ GLC KV A E R++ +V +Y+A+++G+C+A +
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV-VYNALISGFCKAGRIEKA---EAL 242
Query: 185 PTPISEVGYCKVDLV---------------EKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+ +S++G C+ DLV ++A + E+ G S +LL + C
Sbjct: 243 KSYMSKIG-CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC 301
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQ----IMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
V K + +EP + YS +++ C T+ A LF+ +G
Sbjct: 302 RVSHPDKCYNFMVK----EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
+VVTYT++I ++ R + A L M G+ PD I YT +L + +D
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTIL-DHLCKSGNVDKAYG 416
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
++ DM + EI+ D + Y+ LI+GL ++ +AI+LFEDM K PD++T+ +I
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
Query: 406 KKGLMKEASELLDEMSSKGMT 426
+ + A ++ D+M KG T
Sbjct: 477 RGKKLSAAYKVWDQMMDKGFT 497
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 160/365 (43%), Gaps = 36/365 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEM-REELRVKNIDLDIKH 60
G +D V+ + SG+ D A + LC KVD A EM EE++ + L
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI G+C G + A + + M G +PD+VTYNVL N+ + A EM
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-------SVEIYSAMVNGYCEAS 173
G++ ++ ++ +++ C +V + +N + + V YS ++ +C AS
Sbjct: 283 RSGIQLDAYSYNQLLKRHC---RVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
N KAY LF E+ KG + + L+ G+
Sbjct: 340 NT------------------------RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
A KLL+ M L + P +I Y+ +LD LC G A +F+ + TPD ++Y +
Sbjct: 376 SSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNS 435
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+I+ CR + EA+ LF+DMK + PD +T+ ++ G L +W M
Sbjct: 436 LISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII-GGLIRGKKLSAAYKVWDQMMDK 494
Query: 354 EISLD 358
+LD
Sbjct: 495 GFTLD 499
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 187/411 (45%), Gaps = 28/411 (6%)
Query: 6 DVVDKFKEFKES-GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
D++D E+ G D A+N+ D LC+ KV A++ + + + D+ YT L
Sbjct: 96 DLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTIL 155
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-DEMESDG 123
I G G + DA ++N M G PD L G+C + +A +E++S
Sbjct: 156 INGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSAR 215
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY 179
V+ ++ + +I G C G++ +AEA + + E Y+ ++N Y + NN
Sbjct: 216 VKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYD--NNMLKR 273
Query: 180 GDD------KSPTPISEVGY-------CKVDLVEKAYELFL-ELSNKG--DIAKEESCFK 223
+ +S + Y C+V +K Y + E+ +G D+ +
Sbjct: 274 AEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYST--- 330
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L+ C + KA +L E MR + + + Y+ ++ A G + A+ L D G
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
+PD + YTT+++ C+ ++ +A +F DM I PD I+Y L+ G ++ + I
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
++ DMK E D + + +I GL++ A ++++ M+DKG D+
Sbjct: 451 K-LFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
++ Y + L G +A +FD + Y I R + + A ++
Sbjct: 9 RLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYW 68
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
DMK G TY+ + G K D+I+ + DM+ D+ ++V ++ L +
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCK-VKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRE 127
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ A++ F M+ +G EPD V+YT +I+ ++ G + +A E+ + M G++P +
Sbjct: 128 NKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC 187
Query: 433 SAVNRSILKARKV 445
+A+ + ARKV
Sbjct: 188 AALVVGLCHARKV 200
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
+ E G+ D + Y + D LCK G VD A + ++ I D Y +LI G C G
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ +A +F +MK K PD +T+ + G+ R + A +D+M G +
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 133 MIIEGLCSV 141
+I+ CS+
Sbjct: 505 TLIKASCSM 513
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 202/419 (48%), Gaps = 23/419 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G+ LD V ++ D K G + A + + + + I ++ YT LIKG C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + +AF M+ ++ +G +P IVTY+ L G C+ R +++M G P+
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ ++++GL G + A ++ +S+ + + N +
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID------------------- 504
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDIGKAMKLLETMRSLNV 249
G+C+++ ++A ++F + G I + + F + ++ ++ G + +A+ L M + +
Sbjct: 505 -GWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
EP + Y ++DA C K LFD + D+ +I+ + + +++A
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
F ++ ++PD++TY ++ G + + LD I+ +K T + V ++LI+ L
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICG-YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
K ++ + AIR+F M +KG +P+ VTY ++ + K ++ + +L +EM KG++PS
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 15/317 (4%)
Query: 21 LDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM 80
L+ V +N + D C+L + D+A+++ + + I D+ +TT+++ ++G L +A ++
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
F M G +PD + Y L C++ + + + FD M+ + + + ++I L
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 141 VGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNN-----------NNYGDDKSP 185
++ +A FN L + +E Y+ M+ GYC + +G +
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
I CK + ++ A +F ++ KG + L+ DI + KL E M+
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+ PS + YSI++D LC G+ A ++F + PDVV Y +I YC++ L
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 306 EALDLFQDMKRRGIKPD 322
EA L++ M R G+KPD
Sbjct: 794 EAALLYEHMLRNGVKPD 810
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 208/473 (43%), Gaps = 76/473 (16%)
Query: 4 DSDVVDKFKEFKESGMF----LDGVAYNIVFDALCKLGKVDDAIEM---REELRV----- 51
D + ++ K+F G LD + + C+ G VD A+E+ +L V
Sbjct: 123 DEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQD 182
Query: 52 ------------KNIDLDIKHYTTLIKG------YCLQGNLIDAFYMFNEMKN------- 86
+DL H+ L +G G ++DA + E+
Sbjct: 183 SVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRL 242
Query: 87 ---KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
+GF+ IV+ N + G+ D+ VA + G PN T +I G C G+
Sbjct: 243 VMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGE 301
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+ A F ++ + +E YS +++GY +A ++
Sbjct: 302 MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG------------------------ML 337
Query: 200 EKAYELFLELSNKG---DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
++LF + +KG D+ S + K GD+ A + + M + P+ + Y
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVK---SGDLATASVVYKRMLCQGISPNVVTY 394
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I++ LC G+ A ++ + RG P +VTY+++I+ +C+ +L+ L++DM +
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G PDV+ Y VL+ G K L + + + Q+ I L+VV ++ LI+G + + ++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS-IRLNVVVFNSLIDGWCRLNRFD 513
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+A+++F M G++PD T+T ++ + +G ++EA L M G+ P +
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E M D V YN + C L ++D+A + E L+V + T LI C
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
++ A MF+ M KG KP+ VTY L ++ + + F+EM+ G+ P+ +
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASN 174
+ +II+GLC G+V EA F++ D V Y+ ++ GYC+
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 791
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E +E G+ V+Y+I+ D LCK G+VD+A + + + D+ Y LI+GYC
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 71 QGNLIDAFYMFNEMKNKGFKPD 92
G L++A ++ M G KPD
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPD 810
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E G + V Y + D K ++ + ++ EE++ K I I Y+ +I G C
Sbjct: 694 FSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G + +A +F++ + PD+V Y +L G C+ A ++ M +GV+P+
Sbjct: 754 RGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813
Query: 131 HKMIIE 136
+ + E
Sbjct: 814 QRALSE 819
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 192/429 (44%), Gaps = 45/429 (10%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
K+ SG+ + +N + + LCK G ++ A + E+R + Y TLIKG C
Sbjct: 145 KKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV 204
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES--DGVEPNST 129
N+ A Y+FN M G +P+ VT N++ +C+ + + NN +E D + N+
Sbjct: 205 NNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ--KGVIGNNNKKLLEEILDSSQANAP 262
Query: 130 THKMIIEGLCSV--------GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
+I C++ G V +A + + K+V +Y+ ++ G C + N
Sbjct: 263 LDIVI----CTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGN--- 315
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+ AY ++ +G + L++ LC G +A
Sbjct: 316 ---------------------MVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEA 354
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
L TM++ V P QI Y +++ LC G A S + P+V+ + +I+
Sbjct: 355 CDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
Y R AL + M G+KP+V T L++G K +D + +M+ T+I
Sbjct: 415 YGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAW-WVKNEMRSTKIHP 473
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
D Y++L+ + A +L+++M+ +G +PD +TYT+++ KG +K+A LL
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLL 533
Query: 418 DEMSSKGMT 426
+ + G+T
Sbjct: 534 SRIQATGIT 542
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 188/408 (46%), Gaps = 29/408 (7%)
Query: 29 VFDALCKLGKVDDAIEMREEL-RVKNIDLD--IKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
V D + K +D +RE + + K+ D D + ++++++ CLQG L A ++ +M
Sbjct: 90 VLDYILK-SSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMI 148
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
G P ++T+N L G+C+ A EM G PN ++ +I+GLCSV V
Sbjct: 149 YSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVD 208
Query: 146 EAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
+A FN + + + +V+ C+ NN S +D+V
Sbjct: 209 KALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVIC 268
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
+ +SCFK G++ +A+++ + M NV ++Y++++
Sbjct: 269 TILM-------------DSCFK-------NGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
LC G A V RG PDV TY T+I++ C+ EA DL M+ G+ P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
D I+Y V++ G + ++ N M ++ + +V+ ++V+I+G + + A+ +
Sbjct: 369 DQISYKVIIQGLCIH-GDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
M+ G++P+ T +I Y K G + +A + +EM S + P +
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDT 475
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 28/313 (8%)
Query: 21 LDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM 80
LD V I+ D+ K G V A+E+ +E+ KN+ D Y +I+G C GN++ A+
Sbjct: 263 LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGF 322
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
+M +G PD+ TYN L + +C+ + A + M++ GV P+ ++K+II+GLC
Sbjct: 323 MCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCI 382
Query: 141 VGKVGEAE----AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G V A + V +++ +++GY YGD S +
Sbjct: 383 HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGY-------GRYGDTSSALSV-------- 427
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
L L K ++ + K G + A + MRS + P Y
Sbjct: 428 ------LNLMLSYGVKPNVYTNNALIHGYVK---GGRLIDAWWVKNEMRSTKIHPDTTTY 478
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+++L A C +G + A L+D + RG PD++TYT ++ C LK+A L ++
Sbjct: 479 NLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQA 538
Query: 317 RGIKPDVITYTVL 329
GI D + + +L
Sbjct: 539 TGITIDHVPFLIL 551
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEM---------REELRVKNIDL 56
+ D + G+ D ++Y ++ LC G V+ A E E+ + N+ +
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 57 D--------------------------IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFK 90
D + LI GY G LIDA+++ NEM++
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 91 PDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
PD TYN+L C R+A +DEM G +P+ T+ ++ GLC G++ +AE+
Sbjct: 473 PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Query: 151 FNRLQDKSVEI 161
+R+Q + I
Sbjct: 533 LSRIQATGITI 543
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + K G++ DA ++ E+R I D Y L+ C G+L AF +++EM
Sbjct: 444 NALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR 503
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+G +PDI+TY L G+C + A + +++ G+ + ++ + + + GE
Sbjct: 504 RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Query: 147 A 147
A
Sbjct: 564 A 564
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 207/433 (47%), Gaps = 38/433 (8%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
M V+ E + G+ D + + DALCK G V +A ++ E++R K +++++T
Sbjct: 182 MVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFT 240
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+L+ G+C +G L++A + +MK G +PDIV + L +G + A + ++M
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G EPN + ++I+ LC K D+++ ++ M CEA D
Sbjct: 301 GFEPNVNCYTVLIQALCRTEK----------RMDEAMRVFVEMERYGCEA--------DI 342
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
+ T + G+CK +++K Y + ++ KG + + + +++ + ++L+E
Sbjct: 343 VTYTALIS-GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
M+ P ++Y++V+ C +G+ K A L++ G +P V T+ MIN +
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA-------ALDVINTIWRDM--KQT 353
L EA + F++M RGI ++ YG+ K+ L++ +W + K +
Sbjct: 462 FLIEACNHFKEMVSRGI------FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTS 515
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM---ISLYYKKGLM 410
L+V +++ I+ L + ++A DM++ L P TY + ++ Y + +
Sbjct: 516 SCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIA 575
Query: 411 KEASELLDEMSSK 423
E +E + +M+S+
Sbjct: 576 AEITEKVVKMASE 588
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 11/230 (4%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L+ + + KA+++L+ M +EP + ++ +LDALC G K A +F+ +
Sbjct: 173 LMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK- 231
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG---SFKNAAAL 340
F P++ +T+++ +CR L EA ++ MK G++PD++ +T LL G + K A A
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 341 DVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED-AIRLFEDMIDKGLEPDKVTYTD 399
D++N DM++ +V CY+VLI L +T+ D A+R+F +M G E D VTYT
Sbjct: 292 DLMN----DMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
+IS + K G++ + +LD+M KG+ PS ++ + + +K QF E
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQ--VTYMQIMVAHEKKEQFEE 395
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 3/255 (1%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNVEP 251
+ ++V+KA E+ E+ G + +E F LL LC G + +A K+ E MR P
Sbjct: 177 FASANMVKKAVEVLDEMPKYG-LEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPP 234
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ ++ +L C GK A+ + G PD+V +T +++ Y + +A DL
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
DM++RG +P+V YTVL+ + +D ++ +M++ D+V Y+ LI+G K
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ + +DM KG+ P +VTY ++ + KK +E EL+++M +G P I
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 432 ISAVNRSILKARKVQ 446
+ V R K +V+
Sbjct: 415 YNVVIRLACKLGEVK 429
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 193/423 (45%), Gaps = 33/423 (7%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMR--EELRVKNIDLDIKHYTTLIKGYCL 70
+ ++ G D V Y++V +L + K+D + +R +E+ ++LD++ +I G+
Sbjct: 222 KMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAK 281
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G+ A + + G T + + + + A F+E+ G++P +
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +++G G + +AE+ + ++ + V YS +++ Y A
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGR------------ 389
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVGDIGKAMKLLETMR 245
+ +V K E GD+ F +LL G+ K ++L+ M+
Sbjct: 390 ------WESARIVLKEME-------AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S+ V+P + Y++V+D HA + FD + G PD VT+ T+I+ +C+
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI 496
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
A ++F+ M+RRG P TY +++ S+ + D + + MK I +VV ++ L
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMI-NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTL 555
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
++ K+ + DAI E+M GL+P Y +I+ Y ++GL ++A M+S G+
Sbjct: 556 VDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGL 615
Query: 426 TPS 428
PS
Sbjct: 616 KPS 618
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 164/386 (42%), Gaps = 64/386 (16%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E ++ G+ D Y+++ DA G+ + A + +E+ ++ + ++ L+ G+ +G
Sbjct: 364 EMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
F + EMK+ G KPD YNV+ + + A+ FD M S+G+EP+ T
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+I+ C G+ AE F ++ + Y+ M+N Y + + D K
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY----GDQERWDDMK----- 534
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
L ++ ++G + + L+ G A++ LE M+S+
Sbjct: 535 ---------------RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVG 579
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
++PS MY+ +++A G ++ A + F G P ++ ++IN++ EA
Sbjct: 580 LKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAF 639
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+ Q MK G+KPDV+TYT L+
Sbjct: 640 AVLQYMKENGVKPDVVTYTTLM------------------------------------KA 663
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDK 394
L++ D ++ ++E+MI G +PD+
Sbjct: 664 LIRVDKFQKVPVVYEEMIMSGCKPDR 689
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G +D ++ +E K G+ YN + +A + G + A+ + + +
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+LI + +AF + MK G KPD+VTY L + R D+ + ++EM
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682
Query: 122 DGVEPNSTTHKMIIEGL 138
G +P+ M+ L
Sbjct: 683 SGCKPDRKARSMLRSAL 699
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 175/367 (47%), Gaps = 29/367 (7%)
Query: 54 IDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAI 113
I+ DI ++L+ G+CL ++ DA Y+ +M+ G K D+V +L +C+N A+
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 114 NNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGY 169
M+ G+ PN T+ +I GLC G++ +AE + + K + +SA+++ Y
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 170 CEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+ K+ V+ Y++ +++S ++ S L+ LC
Sbjct: 129 AKRG---------------------KLSKVDSVYKMMIQMSIDPNVFTYSS---LIYGLC 164
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
+ + +A+K+L+ M S P+ + YS + + + L D RG + V
Sbjct: 165 MHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTV 224
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
+ T+I Y + + AL +F M G+ P++ +Y ++L G F N ++ +
Sbjct: 225 SCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR-FEH 283
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
M++T LD++ Y+++I+G+ K ++A LF + K +EPD YT MI+ + G+
Sbjct: 284 MQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGM 343
Query: 410 MKEASEL 416
EA L
Sbjct: 344 RTEADAL 350
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 28/329 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D V + ++ G+ D V I+ D LCK V A+E+ + ++ + I ++ Y++LI
Sbjct: 31 DAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLI 90
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G C G L DA +EM +K P+++T++ L + + + + M ++
Sbjct: 91 TGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSID 150
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGD 181
PN T+ +I GLC +V EA + + K +V YS + NG+ ++S
Sbjct: 151 PNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSR------- 203
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
V+ +L ++ +G A SC L+ G I A+ +
Sbjct: 204 -----------------VDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
M S + P+ Y+IVL L G+ + A S F+ D++TYT MI+ C+
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+KEA DLF +K + ++PD YT+++
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 124/242 (51%), Gaps = 4/242 (1%)
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
++L + DI S L+ CL I A+ + M + ++ ++ +I++D LC
Sbjct: 4 MMKLGIEPDIVTASS---LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
A + RG +P+VVTY+++I C+ L +A +M + I P+VIT
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
++ L+ ++ L ++++++ M Q I +V YS LI GL + ++AI++ + M
Sbjct: 121 FSALI-DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
I KG P+ VTY+ + + ++K + + +LLD+M +G+ ++ + + + +A K+
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Query: 446 QF 447
Sbjct: 240 DL 241
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
CK LV A E+ + ++G + L+T LC G + A + L M S + P+
Sbjct: 59 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
I +S ++DA GK S++ + P+V TY+++I C N + EA+ +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M +G P+V+TY+ L G FK++ D I + DM Q ++ + V + LI G +
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIK-LLDDMPQRGVAANTVSCNTLIKGYFQAG 237
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
+ A+ +F M GL P+ +Y +++ + G +++A + M
Sbjct: 238 KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L+ LC + A+++L+ M+ + P+ + YS ++ LC G+ A +
Sbjct: 54 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK 113
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
P+V+T++ +I++Y + L + +++ M + I P+V TY+ L+YG L +
Sbjct: 114 INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYG-------LCMH 166
Query: 344 NTIWRDMKQTEISL------DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
N + +K ++ + +VV YS L NG K+ +D I+L +DM +G+ + V+
Sbjct: 167 NRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSC 226
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+I Y++ G + A + M+S G+ P+
Sbjct: 227 NTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 257
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 1/155 (0%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + + + G+ + V+ N + + GK+D A+ + + + +I+ Y ++
Sbjct: 206 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 265
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G G + A F M+ DI+TY ++ G+C+ + A + F +++ VE
Sbjct: 266 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 325
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE 160
P+ + ++I L G EA+A NR K V
Sbjct: 326 PDFKAYTIMIAELNRAGMRTEADA-LNRFYQKHVR 359
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 198/455 (43%), Gaps = 40/455 (8%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V+ KE + G+ + + I L + GK+++A E+ + + + D+ YT LI
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
C L A +F +MK KPD VTY L N + + EME DG P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDD 182
+ T ++++ LC G GEA + ++D+ + Y+ ++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI---------------- 405
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
G +V ++ A ELF + + G + + GD A++ E
Sbjct: 406 --------CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
M++ + P+ + + L +L G+ + A+ +F G PD VTY M+ Y ++
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR---DMKQTEISLDV 359
+ EA+ L +M G +PDVI L+ +K D ++ W+ MK+ ++ V
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA----DRVDEAWKMFMRMKEMKLKPTV 573
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
V Y+ L+ GL K ++AI LFE M+ KG P+ +T+ + K + A ++L +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 420 MSSKGMTPSSHIISAVNRSILKARKVQ-----FHE 449
M G P + + ++K +V+ FH+
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 668
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 192/440 (43%), Gaps = 30/440 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
K + G D V Y ++ DALC K+D A E+ E+++ D Y TL+ +
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+L ++EM+ G PD+VT+ +L +C+ A + D M G+ PN T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +I GL V ++ +A F ++ V+ Y ++ Y ++ GD S
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS-------GDSVS-- 451
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
A E F ++ KG +C L L G +A ++ ++
Sbjct: 452 ---------------ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ + P + Y++++ VG+ A L + G PDV+ ++IN+ + + + E
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE 556
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A +F MK +KP V+TY LL G KN + I ++ M Q + + ++ L
Sbjct: 557 AWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE-LFEGMVQKGCPPNTITFNTLF 615
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+ L K D A+++ M+D G PD TY +I K G +KEA +M K +
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVY 674
Query: 427 PSSHIISAVNRSILKARKVQ 446
P + + ++KA ++
Sbjct: 675 PDFVTLCTLLPGVVKASLIE 694
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 201/450 (44%), Gaps = 23/450 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D + F K+ G+ D V YN++ K+G++D+AI++ E+ + D+
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+LI + +A+ MF MK KP +VTYN L AG+ +N + + AI F+ M
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNN 177
G PN+ T + + LC +V A ++ D V Y+ ++ G +
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 178 N-----------YGDDKSPTPISEVGYCKVDLVEKAYELFLE-LSNKGDIAKEESCFKLL 225
Y D + + G K L+E AY++ L N D L+
Sbjct: 662 AMCFFHQMKKLVYPDFVTLCTLLP-GVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 226 TKLCLVGDIGKAMKLLETMRSLNV--EPSQIMYSIVLDALCHVGKTKHARSLFDSFVG-R 282
+ I A+ E + + + + I+ I+ + C AR+LF+ F
Sbjct: 721 GSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYS-CKHNNVSGARTLFEKFTKDL 779
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G P + TY +I + ++ A D+F +K G PDV TY LL ++ + +D
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL-DAYGKSGKIDE 838
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI-DKGLEPDKVTYTDMI 401
+ ++++M E + + ++++I+GL+K N +DA+ L+ D++ D+ P TY +I
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
K G + EA +L + M G P+ I
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 29/428 (6%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D Y +F +L G + A ++R L+ Y LI +A ++
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
M +GF+P + TY+ L G+ + + + EME+ G++PN T + I L
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 142 GKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
GK+ EA R+ D+ V Y+ +++ C A K+D
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTAR---------------------KLD 310
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
++ +E +K D + LL + D+ + M P + ++
Sbjct: 311 CAKEVFEKMKTGRHKPD---RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
I++DALC G A D +G P++ TY T+I R++ L +AL+LF +M+
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G+KP TY V + K+ ++ + T + MK I+ ++V + + L K +
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALET-FEKMKTKGIAPNIVACNASLYSLAKAGRDRE 486
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A ++F + D GL PD VTY M+ Y K G + EA +LL EM G P +++++
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 438 SILKARKV 445
++ KA +V
Sbjct: 547 TLYKADRV 554
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 192/445 (43%), Gaps = 29/445 (6%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ + E E+G D + N + + L K +VD+A +M ++ + + Y TL+
Sbjct: 521 EAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL 580
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G G + +A +F M KG P+ +T+N L +C+NDE +A+ +M G
Sbjct: 581 AGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD---KSVEIYSAMVNGYCEAS--------- 173
P+ T+ II GL G+V EA F++++ ++ G +AS
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 174 ---------NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
N + +D + ++E G ++ A L G +S
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAG------IDNAVSFSERLVANGICRDGDSILVP 754
Query: 225 LTKL-CLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
+ + C ++ A L E + L V+P Y++++ L + A+ +F
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PDV TY ++++Y + + E +L+++M + + IT+ +++ G K D
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDA 874
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
++ + M + S Y LI+GL K+ +A +LFE M+D G P+ Y +I+
Sbjct: 875 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILIN 934
Query: 403 LYYKKGLMKEASELLDEMSSKGMTP 427
+ K G A L M +G+ P
Sbjct: 935 GFGKAGEADAACALFKRMVKEGVRP 959
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 222/492 (45%), Gaps = 57/492 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ F+ + G + + +N +FD LCK +V A++M ++ D+ Y
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN---DEARVAINNF-- 116
T+I G G + +A F++MK K PD VT L GV + ++A I NF
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 117 ------------DEMESDGVEPN-----STTHKMIIEGLCSVG---------------KV 144
D + S E S + +++ G+C G V
Sbjct: 706 NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV 765
Query: 145 GEAEAHFNRL-QDKSVE----IYSAMVNGYCEASN---NNNNYGDDKSPTPISEVG---- 192
A F + +D V+ Y+ ++ G EA + + KS I +V
Sbjct: 766 SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 193 ----YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL-ETMRSL 247
Y K +++ +EL+ E+S A + +++ L G++ A+ L + M
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+ P+ Y ++D L G+ A+ LF+ + G P+ Y +IN + + A
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
LF+ M + G++PD+ TY+VL+ +D ++++K++ ++ DVVCY+++IN
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLV-DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 368 GLMKTDNYEDAIRLFEDM-IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
GL K+ E+A+ LF +M +G+ PD TY +I G+++EA ++ +E+ G+
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 427 PSSHIISAVNRS 438
P+ +A+ R
Sbjct: 1065 PNVFTFNALIRG 1076
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 123/530 (23%), Positives = 205/530 (38%), Gaps = 89/530 (16%)
Query: 4 DSDVVDKF-KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT 62
D D V +F E ++ G D V + I+ DALCK G +A + + +R + I ++ Y
Sbjct: 343 DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
TLI G L DA +F M++ G KP TY V ++ ++ A+ F++M++
Sbjct: 403 TLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD------------------------KS 158
G+ PN + L G+ EA+ F L+D ++
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 159 VEIYSAMVNGYCEA------SNNNNNYGDDK----------------SPTPISE----VG 192
+++ S M+ CE S N Y D+ PT ++ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
K +++A ELF + KG + L LC ++ A+K+L M + P
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
Y+ ++ L G+ K A F + + PD VT T++ + + +++A +
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALD---------VINTIWRD-------------- 349
+ + L GS A +D V N I RD
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 350 --------------MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
K + + Y++LI GL++ D E A +F + G PD
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
TY ++ Y K G + E EL EMS+ ++ + V ++KA V
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 30/301 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRV-KNIDLDIKH 60
G ++ + +KE + + +NIV L K G VDDA+++ +L ++
Sbjct: 834 GKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACT 893
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI G G L +A +F M + G +P+ YN+L G + EA A F M
Sbjct: 894 YGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV 953
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNN 176
+GV P+ T+ ++++ LC VG+V E +F L++ V Y+ ++NG ++
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR-- 1011
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVGDIG 235
+E+A LF E+ I + + L+ L + G +
Sbjct: 1012 ----------------------LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A K+ ++ +EP+ ++ ++ GK +HA +++ + V GF+P+ TY +
Sbjct: 1050 EAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLP 1109
Query: 296 N 296
N
Sbjct: 1110 N 1110
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 219 ESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDS 278
E+C +L L + G + + + + M+ ++ Y + +L G K A
Sbjct: 119 ETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRK 178
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA 338
GF + +Y +I+ + EA+++++ M G +P + TY+ L+ G K
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR-R 237
Query: 339 ALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
+D + + ++M+ + +V +++ I L + +A + + M D+G PD VTYT
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTP 427
+I + A E+ ++M + P
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+L+AL GK + +FD R D TY T+ S LK+A + M+ G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
+ +Y L++ K+ + + ++R M + YS L+ GL K + +
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAME-VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRS 438
+ L ++M GL+P+ T+T I + + G + EA E+L M +G P + + +
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 439 ILKARKV 445
+ ARK+
Sbjct: 303 LCTARKL 309
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 201/423 (47%), Gaps = 61/423 (14%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+V+D+ +F G D + + DALCK G V DA ++ E++R++ ++++++T+L+
Sbjct: 204 EVLDEMPKF---GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLL 259
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G+C G +++A Y+ +M GF+PDIV Y L +G + A + +M G E
Sbjct: 260 YGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE 319
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGD 181
PN+ + ++I+ LC V ++ EA F ++ + V Y+A+V+G+C+
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK---------- 369
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+ K+D K Y + ++ KG + E + ++ + ++L+
Sbjct: 370 -----------WGKID---KCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E MR + P +Y++V+ C +G+ K A L++ G +P V T+ MIN
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK---------- 351
L EA D F++M RG+ ++V YG+ K ++NT+ +D K
Sbjct: 476 GCLLEASDHFKEMVTRGL------FSVSQYGTLKL-----LLNTVLKDKKLEMAKDVWSC 524
Query: 352 ---QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+ L+V+ +++ I+ L ++A +MI+ P T+ ++ KG
Sbjct: 525 ITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLM-----KG 579
Query: 409 LMK 411
L K
Sbjct: 580 LKK 582
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 15/228 (6%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ KA+++L+ M EP + ++ +LDALC G K A LF+ R F ++ +T+
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTS 257
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
++ +CR+ + EA + M G +PD++ YT LL G + NA + + RDM++
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG-YANAGKMADAYDLLRDMRRR 316
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ CY+VLI L K D E+A+++F +M E D VTYT ++S + K G + +
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 414 SELLDEMSSKGMTPSS----HIISAVNRS---------ILKARKVQFH 448
+LD+M KG+ PS HI+ A + + K R++++H
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYH 424
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 2/254 (0%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
+ D+V+KA E+ E+ G E LL LC G + A KL E MR + +
Sbjct: 193 FASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-MRFPVN 251
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
++ +L C VGK A+ + GF PD+V YT +++ Y + +A DL +
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
DM+RRG +P+ YTVL+ K ++ ++ +M++ E DVV Y+ L++G K
Sbjct: 312 DMRRRGFEPNANCYTVLIQALCK-VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ + +DMI KGL P ++TY ++ + KK +E EL+++M P I
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 433 SAVNRSILKARKVQ 446
+ V R K +V+
Sbjct: 431 NVVIRLACKLGEVK 444
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 177/397 (44%), Gaps = 35/397 (8%)
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVT---YNVLAAGVCRNDEARVAIN 114
I+ Y +++K + + EM+ + P ++ + VL D + AI
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKEN--PQLIEPELFVVLVQRFASADMVKKAIE 204
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK---SVEIYSAMVNGYCE 171
DEM G EP+ +++ LC G V +A F ++ + ++ +++++ G+C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCR 264
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
+ E Y V + E +E DI + LL+
Sbjct: 265 VGK-------------MMEAKYVLVQMNEAGFE--------PDIVDYTN---LLSGYANA 300
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + A LL MR EP+ Y++++ ALC V + + A +F DVVTY
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
T +++ +C+ + + + DM ++G+ P +TY ++ K + + + + M+
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM-EKMR 419
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
Q E D+ Y+V+I K ++A+RL+ +M + GL P T+ MI+ +G +
Sbjct: 420 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL 479
Query: 412 EASELLDEMSSKGMTPSSH--IISAVNRSILKARKVQ 446
EAS+ EM ++G+ S + + ++LK +K++
Sbjct: 480 EASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLE 516
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 35/188 (18%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G +D D ++ + G + Y ++ ALCK+ ++++A+++ E+ + D+ Y
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKG--------------------------------- 88
T L+ G+C G + + + ++M KG
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQ 420
Query: 89 --FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+ PDI YNV+ C+ E + A+ ++EME +G+ P T ++I GL S G + E
Sbjct: 421 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLE 480
Query: 147 AEAHFNRL 154
A HF +
Sbjct: 481 ASDHFKEM 488
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 200/437 (45%), Gaps = 22/437 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM +D + F++ + G+ A ++ ++L K D ++ +++ + +I Y
Sbjct: 147 GMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVY 206
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
L+ G+ A + +EM+ KG PDI TYN L + C+ A++ D ME
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
GV PN T+ I G G++ EA F ++D + + N+ Y
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD--------------DVTANHVTY-- 310
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
T I GYC+++ +++A L + ++G + +L KLC G I +A +LL
Sbjct: 311 ---TTLID--GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
M +EP I + +++A C + A + + G D+ +Y +I+ +C++
Sbjct: 366 TEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
L+ A + M +G P TY+ L+ G F N D I + + ++ + DV
Sbjct: 426 LELENAKEELFSMIEKGFSPGYATYSWLVDG-FYNQNKQDEITKLLEEFEKRGLCADVAL 484
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y LI + K + + A LFE M KGL D V +T M Y++ G + EAS L D M
Sbjct: 485 YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMY 544
Query: 422 SKGMTPSSHIISAVNRS 438
++ + + + +++ S
Sbjct: 545 NRRLMVNLKLYKSISAS 561
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 184/451 (40%), Gaps = 49/451 (10%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-YTTLI 65
++ K K FK + LD +A + + L + + E D+ H ++ L+
Sbjct: 89 ILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPE--------DVSHVFSWLM 140
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
Y G + D+ +F ++++ G KP + VL + + F +M GV
Sbjct: 141 IYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVV 200
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD 181
N + +++ G +AE + +++K V Y+ +++ YC+ S +
Sbjct: 201 ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH------ 254
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
F LS + + + ++T + + ++
Sbjct: 255 ------------------------FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMR 290
Query: 242 ETMRSL-----NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
E R +V + + Y+ ++D C + A L + RGF+P VVTY +++
Sbjct: 291 EATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILR 350
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
C ++EA L +M + I+PD IT L+ K + + + + M ++ +
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK-VKKKMIESGLK 409
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
LD+ Y LI+G K E+A MI+KG P TY+ ++ +Y + E ++L
Sbjct: 410 LDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKL 469
Query: 417 LDEMSSKGMTPSSHIISAVNRSILKARKVQF 447
L+E +G+ + + R I K +V +
Sbjct: 470 LEEFEKRGLCADVALYRGLIRRICKLEQVDY 500
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 133/303 (43%), Gaps = 24/303 (7%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ SG+ + V YN + G++ +A + E++ ++ + YTTLI GYC ++
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDI 323
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A + M+++GF P +VTYN + +C + R A EM +EP++ T +
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGD-----DKSP 185
I C + + A ++ + +++ Y A+++G+C+ N + +K
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 186 TPISEVGYCKVD-LVEKAY---------ELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
+P GY LV+ Y +L E +G A L+ ++C + +
Sbjct: 444 SP----GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A L E+M + ++++ + A GK A +LFD R ++ Y ++
Sbjct: 500 YAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSIS 559
Query: 296 NSY 298
SY
Sbjct: 560 ASY 562
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 200/462 (43%), Gaps = 71/462 (15%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDD-AIEMREELRVKNIDLDIK 59
MGM V+ F KE D YN++ + + A + E+ N ++
Sbjct: 140 MGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLY 199
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ L+ G +G DA MF++M +G P+ VTY +L +G+C+ A A F EM
Sbjct: 200 TFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEM 259
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYCEASN 174
++ G P+S H +++G C +G++ EA RL +K + YS++++G A
Sbjct: 260 QTSGNYPDSVAHNALLDGFCKLGRMVEA-FELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVGD 233
+A+EL+ + K +I + + +L + L G
Sbjct: 319 YT------------------------QAFELYANMLKK-NIKPDIILYTILIQGLSKAGK 353
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
I A+KLL +M S + P Y+ V+ ALC G + RSL PD T+T
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG--------------------- 332
+I S CR ++EA ++F ++++ G P V T+ L+ G
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 333 --------------SFKNAAALDVINTIWRDMKQ---TEISLDVVCYSVLINGLMKTDNY 375
SF I +RD+ T S D+V Y+VLING + +
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI 533
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
+ A++L + KGL PD VTY +I+ ++ G +EA +L
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%)
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
E+K+ G D + VL + + A A+ +F M+ P+ T+ +I+
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL------- 169
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
+V E F L + +Y+ M+ C S N +G I G K A
Sbjct: 170 RVMMREEVFFML---AFAVYNEMLK--CNCSPNLYTFG-------ILMDGLYKKGRTSDA 217
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
++F +++ +G + L++ LC G A KL M++ P + ++ +LD
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
C +G+ A L F GF + Y+++I+ R +A +L+ +M ++ IKPD
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+I YT+L+ G K D + + M IS D CY+ +I L E+ L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLL-SSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQ 396
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
+M + PD T+T +I + GL++EA E+ E+ G +PS +A+ + K+
Sbjct: 397 LEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKS 456
Query: 443 RKVQ 446
+++
Sbjct: 457 GELK 460
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 192/448 (42%), Gaps = 63/448 (14%)
Query: 19 MFLDGVA-----YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN 73
M L G+A +N++ ALC VD A E+ +E+ K + + L++GYC G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR---NDEARVAINNFDEMESDGVEPNSTT 130
+ N M++ G P+ V YN + + CR ND++ + ++M +G+ P+ T
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV---EKMREEGLVPDIVT 254
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I LC GKV +A F+ D ++ Y + P P S
Sbjct: 255 FNSRISALCKEGKVLDASRIFS---DMELDEYLGL-------------------PRPNSI 292
Query: 191 V------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
G+CKV L+E A LF + D+A +S L L G +A +L+ M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+ PS Y+I++D LC +G A+++ G PD VTY +++ YC + +
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
A L Q+M R P+ T +LL+ +K + + R M + LD V ++
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWK-MGRISEAEELLRKMNEKGYGLDTVTCNI 471
Query: 365 LINGLMKTDNYEDAIRLFEDM-----------------------IDKGLEPDKVTYTDMI 401
+++GL + + AI + + M I+ PD +TY+ ++
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLL 531
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ K G EA L EM + + P S
Sbjct: 532 NGLCKAGRFAEAKNLFAEMMGEKLQPDS 559
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 202/453 (44%), Gaps = 43/453 (9%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ + V YN + + C+ G+ DD+ +M E++R + + DI + + I C +G ++DA
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 78 FYMFNEMKNKGF----KPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
+F++M+ + +P+ +TYN++ G C+ A F+ + + + ++ +
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEAS-----------NNNNN 178
++GL GK EAE ++ DK S+ Y+ +++G C+ N
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
D GYC V V+ A L E+ + +C LL L +G I +A
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF---------------------- 276
+LL M + +I++D LC G+ A +
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 277 -DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
DS + PD++TY+T++N C+ EA +LF +M ++PD + Y + ++ F
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIH-HFC 570
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
+ + +DM++ + Y+ LI GL + + L ++M +KG+ P+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
TY I + +++A+ LLDEM K + P+
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 179/409 (43%), Gaps = 39/409 (9%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G+ D F+ +E+ +YNI L + GK +A + +++ K I I
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y L+ G C G L DA + MK G PD VTY L G C + A + EM
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
+ PN+ T +++ L +G++ EAE ++ +K YG
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKG--------------------YG 463
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
D I G C ++KA E+ + G A +G++G +
Sbjct: 464 LDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA--------------LGNLGNSYIG 509
Query: 241 L--ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
L +++ N P I YS +L+ LC G+ A++LF +G PD V Y I+ +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG-SFKNAAALDVINTIWRDMKQTEISL 357
C+ + A + +DM+++G + TY L+ G KN + I+ + +MK+ IS
Sbjct: 570 CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN--QIFEIHGLMDEMKEKGISP 627
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
++ Y+ I L + + EDA L ++M+ K + P+ ++ +I + K
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 208/489 (42%), Gaps = 47/489 (9%)
Query: 4 DSDVVDK----FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIK 59
DS VD F E E G + + I+ CK G D +E+ + + +
Sbjct: 159 DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKV 218
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
Y T++ +C +G D+ M +M+ +G PDIVT+N + +C+ + A F +M
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 120 ESD---GV-EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNG--- 168
E D G+ PNS T+ ++++G C VG + +A+ F +++ S++ Y+ + G
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 169 ---YCEASN-----NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEES 220
+ EA + G I G CK+ ++ A + + G +
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 221 CFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV 280
LL C VG + A LL+ M N P+ +I+L +L +G+ A L
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 281 GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK-------------------- 320
+G+ D VT +++ C L +A+++ + M+ G
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 321 ---PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
PD+ITY+ LL G K + N ++ +M ++ D V Y++ I+ K
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKN-LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A R+ +DM KG TY +I K + E L+DEM KG++P+ + +
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 438 SILKARKVQ 446
+ + KV+
Sbjct: 638 YLCEGEKVE 646
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/506 (21%), Positives = 186/506 (36%), Gaps = 108/506 (21%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
+ + YN++ CK+G ++DA + E +R + ++ Y ++G G I+A +
Sbjct: 290 NSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+M +KG P I +YN+L G+C+ A M+ +GV P++ T+ ++ G CSV
Sbjct: 350 KQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV 409
Query: 142 GKVGEAEAHFNRLQDKS---------VEIYSAMVNGYCEASN------NNNNYGDDKSPT 186
GKV A++ + + + ++S G + N YG D
Sbjct: 410 GKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTC 469
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAK----------------EESCFK------- 223
I G C ++KA E+ + G A E +C
Sbjct: 470 NIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYST 529
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA----------- 272
LL LC G +A L M ++P + Y+I + C GK A
Sbjct: 530 LLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG 589
Query: 273 ------------------------RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
L D +G +P++ TY T I C +++A
Sbjct: 590 CHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD------------------- 349
+L +M ++ I P+V ++ L+ +F D+ ++
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIE-AFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNEL 708
Query: 350 ------MKQTEI---------SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
+K TE+ L Y L+ L K D E A + MID+G D
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768
Query: 395 VTYTDMISLYYKKGLMKEASELLDEM 420
+I K G KEA+ D+M
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKM 794
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 187/436 (42%), Gaps = 37/436 (8%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELR-VKNIDLD-------IKHYTTLIKGYCLQGNLID 76
++ I DA + ++ +M EE++ + N+ L + +++ + ++
Sbjct: 34 SHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDK 93
Query: 77 AFYMFNEMKNK--GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
AF F ++++ KP + YN+L + + +M G+ P + T ++
Sbjct: 94 AFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLL 153
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
I LC V A F+ + +K C+ N +G I GYC
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKG-----------CKP--NEFTFG-------ILVRGYC 193
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K L +K EL + + G + + +++ C G + K++E MR + P +
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 255 MYSIVLDALCHVGKTKHARSLF-----DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
++ + ALC GK A +F D ++G P+ +TY M+ +C++ L++A
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLP-RPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
LF+ ++ + +Y + L G ++ ++ T+ + M I + Y++L++GL
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEA-ETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
K DA + M G+ PD VTY ++ Y G + A LL EM P++
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 430 HIISAVNRSILKARKV 445
+ + + S+ K ++
Sbjct: 432 YTCNILLHSLWKMGRI 447
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 151/374 (40%), Gaps = 67/374 (17%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRV--------- 51
MG S+ + ++ E G LD V NI+ D LC G++D AIE+ + +RV
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 52 --------------KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYN 97
N D+ Y+TL+ G C G +A +F EM + +PD V YN
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 98 VLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
+ C+ + A +ME G + T+ +I GL ++ E + +++K
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK 623
Query: 158 SVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG 213
+ Y+ + CE VE A L E+ K
Sbjct: 624 GISPNICTYNTAIQYLCEGEK------------------------VEDATNLLDEMMQK- 658
Query: 214 DIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
+IA FK L+ C V D A ++ ET S+ + + +YS++ + L G+ A
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQ-KEGLYSLMFNELLAAGQLLKA 717
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
L ++ + RGF Y ++ S C+ + L+ A + M RG YG
Sbjct: 718 TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRG------------YG 765
Query: 333 SFKNAAALDVINTI 346
F AA + VI+ +
Sbjct: 766 -FDPAALMPVIDGL 778
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 31/284 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ + F E + D VAYNI CK GK+ A + +++ K ++ Y
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETY 597
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+LI G ++ + + + +EMK KG P+I TYN +C ++ A N DEM
Sbjct: 598 NSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQ 657
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFN---RLQDKSVEIYSAMVNGYCEASNNNNN 178
+ PN + K +IE C V A+ F + + +YS M N A
Sbjct: 658 KNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAA------ 711
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
G T + E ++++ +EL L L+ LC ++ A
Sbjct: 712 -GQLLKATELLEA------VLDRGFELGTFLYK-----------DLVESLCKKDELEVAS 753
Query: 239 KLLETM--RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV 280
+L M R +P+ +M V+D L +G K A S D +
Sbjct: 754 GILHKMIDRGYGFDPAALM--PVIDGLGKMGNKKEANSFADKMM 795
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF-LELSNKGDIAKEESCFKLLTKLCL 230
+S + ++G TP + + E+ EL L LS+ K S +++
Sbjct: 28 SSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAK 87
Query: 231 VGDIGKAMKLLETMRSLNVE--PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV 288
I KA + +RS E PS +Y+++L++ + + L+ V G P
Sbjct: 88 SNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQT 147
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALDVINT 345
T+ +I + C + + A +LF +M +G KP+ T+ +L+ G K L+++N
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
M+ + + V Y+ +++ + +D+ ++ E M ++GL PD VT+ IS
Sbjct: 208 ----MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 406 KKGLMKEASELLDEM 420
K+G + +AS + +M
Sbjct: 264 KEGKVLDASRIFSDM 278
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 185/417 (44%), Gaps = 36/417 (8%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
E F D + Y+ + + KLG+ D AI + +E++ + K YTTL+ Y G +
Sbjct: 226 EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVE 285
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
A +F EMK G P + TY L G+ + A + +M DG+ P+ + +
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV----VFL 341
Query: 136 EGLCSV-GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
L ++ GKVG E N ++S M C +PT +S
Sbjct: 342 NNLMNILGKVGRVEELTN--------VFSEMGMWRC-------------TPTVVSYNTVI 380
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFK-------LLTKLCLVGDIGKAMKLLETMRSL 247
K KA+ E+S+ D K +S L+ C + KA+ LLE M
Sbjct: 381 KALFESKAH--VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK 438
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
P Y +++AL + + A LF Y MI + + L EA
Sbjct: 439 GFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEA 498
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+DLF +MK +G PDV Y L+ G K A ++ N++ R M++ D+ +++++N
Sbjct: 499 VDLFNEMKNQGSGPDVYAYNALMSGMVK-AGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
G +T AI +FE + G++PD VTY ++ + G+ +EA+ ++ EM KG
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 19/399 (4%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G + + F E K++ M Y + K+GKV+ A+++ EE++ +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
YT LIKG G + +A+ + +M G PD+V N L + + N F EM
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 121 SDGVEPNSTTHKMIIEGLC-SVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNN 175
P ++ +I+ L S V E + F++++ SV YS +++GYC+ +
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 176 NNNY----GDDKSPTPISEVGYC-------KVDLVEKAYELFLEL-SNKGDIAKEESCFK 223
D+ P YC K E A ELF EL N G+++
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV- 484
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ G + +A+ L M++ P Y+ ++ + G A SL G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
D+ ++ ++N + R + A+++F+ +K GIKPD +TY LL G F +A +
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL-GCFAHAGMFEEA 603
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+ R+MK D + YS +++ + D+ +D + F
Sbjct: 604 ARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDVSSF 642
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 174/400 (43%), Gaps = 30/400 (7%)
Query: 52 KNIDLDIKHYTTLIKGYCLQGNLI--DAFYMFNEMKNKGF---KPDIVTYNVLAAGVCRN 106
+N D Y TLI+ CL+ + + + E+ + P +++ V A G R
Sbjct: 120 RNFQHDCSTYMTLIR--CLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALG--RA 175
Query: 107 DEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMV 166
A++ F + + +P S+T+ +I L G+ +K E+Y+ M
Sbjct: 176 KMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQ-----------HEKVHEVYTEMC 224
Query: 167 N-GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
N G C + D + + + Y K+ + A LF E+ + E+ LL
Sbjct: 225 NEGDC--------FPDTITYSALIS-SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
VG + KA+ L E M+ P+ Y+ ++ L G+ A + + G T
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
PDVV ++N ++ ++E ++F +M P V++Y ++ F++ A + +++
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSS 395
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+ MK +S YS+LI+G KT+ E A+ L E+M +KG P Y +I+
Sbjct: 396 WFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
K + A+EL E+ SS + + + + K K+
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 3/249 (1%)
Query: 200 EKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
EK +E++ E+ N+GD + + L++ +G A++L + M+ ++P++ +Y+
Sbjct: 214 EKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+L VGK + A LF+ G +P V TYT +I + + EA ++DM R G
Sbjct: 274 LLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDG 333
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
+ PDV+ L+ ++ + ++ +M + VV Y+ +I L ++ +
Sbjct: 334 LTPDVVFLNNLM-NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 379 IR-LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
+ F+ M + P + TY+ +I Y K +++A LL+EM KG P ++
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 438 SILKARKVQ 446
++ KA++ +
Sbjct: 453 ALGKAKRYE 461
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 187/417 (44%), Gaps = 64/417 (15%)
Query: 35 KLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM-FNEMKNKGFKPDI 93
++G + A+EM ++ D +K Y ++ L N I YM + +MK GF+P++
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTL-LGENRIQMIYMVYRDMKRDGFEPNV 181
Query: 94 VTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNR 153
TYNVL +C+N++ A EM + G P++ ++ +I +C VG V E R
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER 241
Query: 154 LQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG 213
+ V +Y+A++NG C+ + + A+EL E+ KG
Sbjct: 242 F-EPVVSVYNALINGLCKEHD------------------------YKGAFELMREMVEKG 276
Query: 214 DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHAR 273
+ P+ I YS +++ LC+ G+ + A
Sbjct: 277 -----------------------------------ISPNVISYSTLINVLCNSGQIELAF 301
Query: 274 SLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYG 332
S + RG P++ T ++++ + +ALDL+ M R G++P+V+ Y L+ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 333 SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEP 392
+ + + +++ M++ S ++ Y LING K + + A+ ++ M+ G P
Sbjct: 362 FCSHGNIVKAV-SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 393 DKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
+ V YT+M+ + KEA L++ MS + PS +A + + A ++ + E
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 175/406 (43%), Gaps = 43/406 (10%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+E E G+ + ++Y+ + + LC G+++ A ++ + +I ++L+KG L+
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 72 GNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G DA ++N+M + G +P++V YN L G C + A++ F ME G PN T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +I G G + A +N++ +V +Y+ MV C S
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF----------- 438
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMR 245
K E +E+ +K + A F K LC G + A K+ M
Sbjct: 439 --------------KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 246 SLNVEPSQIM-YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+ P I+ Y+ +LD L + + A L RG TY T+++ C
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA------LDVINTIWRDMKQTEISLD 358
AL L M G PD IT +++ K A LD+++ R + D
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRP-----D 599
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
V+ Y+ +I GL +++ ED + L E MI G+ P T++ +I+ +
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 157/337 (46%), Gaps = 32/337 (9%)
Query: 2 GMDSDVVDKFKE-FKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
G D +D + + + G+ + VAYN + C G + A+ + + +I+
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +LI G+ +G+L A Y++N+M G P++V Y + +CR+ + + A + + M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYCEASNN 175
+ P+ T I+GLC G++ AE F +++ + ++ Y+ +++G +A+
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANR- 508
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
+E+AY L E+ +G + LL C G G
Sbjct: 509 -----------------------IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPG 545
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD--SFVGRGFTPDVVTYTT 293
A++L+ M P +I ++++ A C GK + A + D S R + PDV++YT
Sbjct: 546 IALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTN 605
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+I CR N ++ + L + M GI P + T++VL+
Sbjct: 606 VIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 181/430 (42%), Gaps = 36/430 (8%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E G D V+Y V ++C++G V + E+ E + + Y LI G C +
Sbjct: 206 EMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEH 260
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ AF + EM KG P++++Y+ L +C + + +A + +M G PN T
Sbjct: 261 DYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Query: 133 MIIEGLCSVGKVGEAEAHFNRL-----QDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
+++G G +A +N++ +V Y+ +V G+C N
Sbjct: 321 SLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN------------- 367
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+ KA +F + G + L+ G + A+ + M +
Sbjct: 368 -----------IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
P+ ++Y+ +++ALC K K A SL + P V T+ I C L A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 308 LDLFQDMKRRG-IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
+F+ M+++ P+++TY LL G K A ++ + R++ + Y+ L+
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAK-ANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+G A++L M+ G PD++T +I Y K+G + A+++LD +S
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 427 PSSHIISAVN 436
+IS N
Sbjct: 596 WRPDVISYTN 605
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 185/462 (40%), Gaps = 59/462 (12%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G+ V+ F KE G YN V D L ++ + +++ + ++
Sbjct: 124 VGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFT 183
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVT------------------------- 95
Y L+K C + A + EM NKG PD V+
Sbjct: 184 YNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE 243
Query: 96 -----YNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
YN L G+C+ + + A EM G+ PN ++ +I LC+ G++ A +
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 151 FNRLQDKSVE--IY--SAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
++ + IY S++V G C D ++ ++
Sbjct: 304 LTQMLKRGCHPNIYTLSSLVKG-CFLRGTT-------------------FDALDLWNQMI 343
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
+ ++ + L+ C G+I KA+ + M + P+ Y +++
Sbjct: 344 RGFGLQPNVVAYNT---LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G A +++ + G P+VV YT M+ + CR + KEA L + M + P V T+
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 327 TVLLYGSFKNAAALDVINTIWRDM-KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
+ G +A LD ++R M +Q ++V Y+ L++GL K + E+A L ++
Sbjct: 461 NAFIKG-LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+G+E TY ++ GL A +L+ +M G +P
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 197/464 (42%), Gaps = 67/464 (14%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D + F + ES V ++ + A+ KL K + I + L + I D+ +TTL
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I +C L A +M GF+P IVT+ L G C + A++ D++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
EPN + II+ LC G+V A ++ + N ++ +G S
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG--VS 238
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
+S++ + + D+ +T L+ GK +LLE
Sbjct: 239 ARILSDM---------------MRMGISPDV---------ITFSALIDVYGKEGQLLEAK 274
Query: 245 RSLN------VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+ N V P+ + Y+ +++ LC G A+ + + V +GF P+ VTY T+IN Y
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGY 334
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG---SFKNAAALDVINTI--------- 346
C+ + + + + M R G+ D TY L G + K +AA V+ +
Sbjct: 335 CKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDM 394
Query: 347 ----------------------WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
D+++++ + ++ Y+++I GL K D EDA LF
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTP 427
+ KG+ PD +TY M+ +K L +EA EL +M + G+ P
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
+ K++ E LF L G S L+ C + A+ L M L E
Sbjct: 87 IAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE 146
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
PS + + +++ CHV + A SL D VG G+ P+VV Y T+I+S C + ALD+
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
+ MK+ GI+PDV+TY L+ F ++ V I DM + IS DV+ +S LI+
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLF-HSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
K +A + + +MI + + P+ VTY +I+ GL+ EA ++L+ + SKG P++
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 431 IISAVNRSILKARKV 445
+ + KA++V
Sbjct: 326 TYNTLINGYCKAKRV 340
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A LF +++ + +LL + + + L + L + ++ ++D
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
C + A S + GF P +VT+ +++N +C +N EA+ L + G +P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+V+ Y ++ S ++ + + MK+ I DVV Y+ LI L + + + R+
Sbjct: 183 NVVIYNTII-DSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
DM+ G+ PD +T++ +I +Y K+G + EA + +EM + + P+
Sbjct: 242 LSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%), Gaps = 1/163 (0%)
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
H K A +LF P +V ++ ++ + ++N + + LF+ ++ GI D+
Sbjct: 56 HSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
++T L+ F A L + + M + +V + L+NG + + +A+ L +
Sbjct: 116 SFTTLI-DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQ 174
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
++ G EP+ V Y +I +KG + A ++L M G+ P
Sbjct: 175 IVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRP 217
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 168/369 (45%), Gaps = 25/369 (6%)
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F+ F+ K + TYN+L +C+ +A F+ M+SDGV PN+ ++
Sbjct: 89 FWEFSRFK-LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
GK+ A A LQ VE G C N+ N K+D
Sbjct: 148 FAEKGKLHFATALL--LQSFEVE-------GCCMVVNSLLNT-------------LVKLD 185
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
VE A +LF E ++ L+ LC VG KA++LL M EP + Y+
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 258 IVLDALCHVGKTKHARSLF-DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++ C + A +F D G +PDVVTYT+MI+ YC+ ++EA L DM R
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
GI P +T+ VL+ G + A + I M DVV ++ LI+G +
Sbjct: 306 LGIYPTNVTFNVLVDG-YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
RL+E+M +G+ P+ TY+ +I+ + + +A ELL +++SK + P + + V
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 437 RSILKARKV 445
KA KV
Sbjct: 425 DGFCKAGKV 433
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 164/355 (46%), Gaps = 26/355 (7%)
Query: 7 VVDKFKEFKESGMFL---DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
V D K F E F D +NI+ LC +GK + A+E+ + + DI Y T
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGF-KPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
LI+G+C L A MF ++K+ PD+VTY + +G C+ + R A + D+M
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G+ P + T ++++G G++ AE EI M++ C + D
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAE-----------EIRGKMISFGC--------FPDV 347
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
+ T + + GYC+V V + + L+ E++ +G + L+ LC + KA +LL
Sbjct: 348 VTFTSLID-GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
+ S ++ P MY+ V+D C GK A + + + PD +T+T +I +C
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV--INTIWRDMKQTEI 355
+ EA+ +F M G PD IT + LL K A + +N I R + +
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 197/418 (47%), Gaps = 24/418 (5%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN++ +LCK G D A +M E ++ + + + L+ + +G L A + ++
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQ 163
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
+ + + N L + + D A+ FDE ++ T ++I GLC VGK
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA- 222
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
+K++E+ M CE N T I G+CK + + KA E+
Sbjct: 223 ----------EKALELLGVMSGFGCEPDIVTYN-------TLIQ--GFCKSNELNKASEM 263
Query: 206 FLELSNKGDIAKEESCF-KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
F ++ + + + + +++ C G + +A LL+ M L + P+ + +++++D
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G+ A + + G PDVVT+T++I+ YCR+ + + L+++M RG+ P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY++L+ + N L + + +I Y+ +I+G K +A + E+
Sbjct: 384 TYSILI-NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
M K +PDK+T+T +I + KG M EA + +M + G +P +S++ +LKA
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 30/308 (9%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNI-DLDIKHYTTLIKGYCLQGNLIDAFYM 80
D V YN + CK +++ A EM ++++ ++ D+ YT++I GYC G + +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
++M G P VT+NVL G + E A +M S G P+ T +I+G C
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 141 VGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
VG+V + + + + + YS ++N C N N
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALC---NENR------------------- 397
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
+ KA EL +L++K I + ++ C G + +A ++E M +P +I +
Sbjct: 398 --LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I++ C G+ A S+F V G +PD +T +++++ + KEA L Q + R
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ-IAR 514
Query: 317 RGIKPDVI 324
+G +V+
Sbjct: 515 KGQSNNVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 168/369 (45%), Gaps = 25/369 (6%)
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F+ F+ K + TYN+L +C+ +A F+ M+SDGV PN+ ++
Sbjct: 89 FWEFSRFK-LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
GK+ A A LQ VE G C N+ N K+D
Sbjct: 148 FAEKGKLHFATALL--LQSFEVE-------GCCMVVNSLLNT-------------LVKLD 185
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
VE A +LF E ++ L+ LC VG KA++LL M EP + Y+
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 258 IVLDALCHVGKTKHARSLF-DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++ C + A +F D G +PDVVTYT+MI+ YC+ ++EA L DM R
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
GI P +T+ VL+ G + A + I M DVV ++ LI+G +
Sbjct: 306 LGIYPTNVTFNVLVDG-YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVS 364
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
RL+E+M +G+ P+ TY+ +I+ + + +A ELL +++SK + P + + V
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVI 424
Query: 437 RSILKARKV 445
KA KV
Sbjct: 425 DGFCKAGKV 433
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 164/355 (46%), Gaps = 26/355 (7%)
Query: 7 VVDKFKEFKESGMFL---DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
V D K F E F D +NI+ LC +GK + A+E+ + + DI Y T
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGF-KPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
LI+G+C L A MF ++K+ PD+VTY + +G C+ + R A + D+M
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G+ P + T ++++G G++ AE EI M++ C + D
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAE-----------EIRGKMISFGC--------FPDV 347
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
+ T + + GYC+V V + + L+ E++ +G + L+ LC + KA +LL
Sbjct: 348 VTFTSLID-GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
+ S ++ P MY+ V+D C GK A + + + PD +T+T +I +C
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV--INTIWRDMKQTEI 355
+ EA+ +F M G PD IT + LL K A + +N I R + +
Sbjct: 467 RMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 197/418 (47%), Gaps = 24/418 (5%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN++ +LCK G D A +M E ++ + + + L+ + +G L A + ++
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQ 163
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
+ + + N L + + D A+ FDE ++ T ++I GLC VGK
Sbjct: 164 SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA- 222
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
+K++E+ M CE N T I G+CK + + KA E+
Sbjct: 223 ----------EKALELLGVMSGFGCEPDIVTYN-------TLIQ--GFCKSNELNKASEM 263
Query: 206 FLELSNKGDIAKEESCF-KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
F ++ + + + + +++ C G + +A LL+ M L + P+ + +++++D
Sbjct: 264 FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G+ A + + G PDVVT+T++I+ YCR+ + + L+++M RG+ P+
Sbjct: 324 KAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAF 383
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
TY++L+ + N L + + +I Y+ +I+G K +A + E+
Sbjct: 384 TYSILI-NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEE 442
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
M K +PDK+T+T +I + KG M EA + +M + G +P +S++ +LKA
Sbjct: 443 MEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 30/308 (9%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNI-DLDIKHYTTLIKGYCLQGNLIDAFYM 80
D V YN + CK +++ A EM ++++ ++ D+ YT++I GYC G + +A +
Sbjct: 240 DIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL 299
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
++M G P VT+NVL G + E A +M S G P+ T +I+G C
Sbjct: 300 LDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR 359
Query: 141 VGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
VG+V + + + + + YS ++N C N N
Sbjct: 360 VGQVSQGFRLWEEMNARGMFPNAFTYSILINALC---NENR------------------- 397
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
+ KA EL +L++K I + ++ C G + +A ++E M +P +I +
Sbjct: 398 --LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I++ C G+ A S+F V G +PD +T +++++ + KEA L Q + R
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ-IAR 514
Query: 317 RGIKPDVI 324
+G +V+
Sbjct: 515 KGQSNNVV 522
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 189/432 (43%), Gaps = 42/432 (9%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D YNI+ + LCK GK + A+ +E K + + Y LI+ YC A +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+M +G KPDIVTY +L G+ + A+N ++ GV P++ + M++ GLC
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 142 GKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
G+ A+ F+ + D+++ +Y+ +++G+ + GD D
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS-------GD--------------FD 502
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
K + L +E K D+ + ++ C G + +A+ + M ++ P + YS
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNA---MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
++D A +F P+VVTYT++IN +C K A + F++M+ R
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK------ 371
+ P+V+TYT L+ K ++ L+ W M + + V ++ L+ G +K
Sbjct: 620 DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Query: 372 ------TDNYEDAI--RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+++ + ++ F M G Y + G++K A D+M K
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKK 739
Query: 424 GMTPSSHIISAV 435
G +P +A+
Sbjct: 740 GFSPDPVSFAAI 751
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 201/446 (45%), Gaps = 16/446 (3%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ E + G +D + I+ +C GKV+ ++ E K +I Y T+I GYC
Sbjct: 193 YDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ +A+ +F E+K KGF P + T+ + G C+ + + E++ G+ +
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWF 312
Query: 131 HKMIIEGLCSVG-KVGEAEAHFNRLQD---KSVEIYSAMVNGYCEASNNNNNYG--DDKS 184
II+ G KV AE+ + + V Y+ ++N C+ G D+ S
Sbjct: 313 LNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEAS 372
Query: 185 -----PTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
P +S YCK + A +L L+++ +G + L+ L + G +
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A+ + + V P +Y++++ LC G+ A+ LF + R PD Y T+I
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ + R EA +F +G+K DV+ + ++ G F + LD M + +
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKG-FCRSGMLDEALACMNRMNEEHL 551
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
D YS +I+G +K + AI++F M +P+ VTYT +I+ + +G K A E
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEE 611
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILK 441
EM + + P+ + + RS+ K
Sbjct: 612 TFKEMQLRDLVPNVVTYTTLIRSLAK 637
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 195/453 (43%), Gaps = 69/453 (15%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
K+ F +G A + L + ++ ++ LR +N+ L + + ++ Y G+L
Sbjct: 91 KKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSL 150
Query: 75 IDAFYMFN---EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
A +++ E+ + PD++ N L + + ++ A +DEM G ++ +
Sbjct: 151 SKAVEIYDYVVELYDS--VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYST 208
Query: 132 KMIIEGLCSVGKVGEA----EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
++++G+C+ GKV E + + ++ Y+ ++ GYC+ GD
Sbjct: 209 CILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK-------LGD------ 255
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM--R 245
+E AY +F EL KG + E+ ++ C GD + +LL + R
Sbjct: 256 -----------IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKER 304
Query: 246 SLNV---------------------------------EPSQIMYSIVLDALCHVGKTKHA 272
L V +P Y+I+++ LC GK + A
Sbjct: 305 GLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVA 364
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
D +G P+ ++Y +I +YC+ A L M RG KPD++TY +L++G
Sbjct: 365 VGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHG 424
Query: 333 SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEP 392
+ D +N + + + +S D Y++L++GL KT + A LF +M+D+ + P
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRG-VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 393 DKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
D Y +I + + G EA ++ KG+
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 177/412 (42%), Gaps = 52/412 (12%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E + G+ + ++Y + A CK + D A ++ ++ + DI Y LI G + G
Sbjct: 370 EASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSG 429
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
++ DA M ++ ++G PD YN+L +G+C+ A F EM + P++ +
Sbjct: 430 HMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYA 489
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPI 188
+I+G G EA F+ +K V++ ++AM+ G+C +
Sbjct: 490 TLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG--------------- 534
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
++++A ++ + + + + ++ D+ A+K+ M
Sbjct: 535 ---------MLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS-LKEA 307
+P+ + Y+ +++ C G K A F R P+VVTYTT+I S + +S L++A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFK-------------NAAALDVINTIWRDMKQTE 354
+ ++ M P+ +T+ LL G K N + + + MK
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 355 ISLDVVCYS-----VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
S Y+ + ++G++KT A + M+ KG PD V++ ++
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKT-----ACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 137/340 (40%), Gaps = 46/340 (13%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + + D Y + D + G D+A ++ K + +D+ H+ +IKG+C
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L +A N M + PD TY+ + G + + AI F ME + +PN T
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +I G C G AE F +Q + +V Y+ ++ + S+
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST----------- 641
Query: 187 PISEVGYCKVDLVEKA-YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM------- 238
+EKA Y L ++NK E F L + + GK +
Sbjct: 642 ------------LEKAVYYWELMMTNK--CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSN 687
Query: 239 --------KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
+ M+S Y+ L LC G K A D V +GF+PD V+
Sbjct: 688 HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747
Query: 291 YTTMINSYCRMNSLKEALDL-FQDMKRRGIKPDVITYTVL 329
+ +++ +C + + K+ ++ F ++ +G++ V VL
Sbjct: 748 FAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVL 787
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 148/361 (40%), Gaps = 52/361 (14%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
+ E G D V Y I+ L G +DDA+ M+ +L + + D Y L+ G C G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ A +F+EM ++ PD Y L G R+ + A F GV+ + H
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+I+G C G + EA A NR+ ++ + YS +++GY + + T I
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD---------MATAI 575
Query: 189 SEVGY-----CKVDLVEKAYELFLELSNKGDIAKEESCFK----------LLTKLCLVGD 233
Y CK ++V L +GD E FK ++T L+
Sbjct: 576 KIFRYMEKNKCKPNVVTYT-SLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 234 IG-------KAMKLLETMRSLNVEPSQIMYSIVLDA---------LCHVGKTKHAR-SLF 276
+ KA+ E M + P+++ ++ +L L + H + SLF
Sbjct: 635 LAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLF 694
Query: 277 DSFVGR----GFTPDVVTYTTMINSYCRMNSLKEALDLFQD-MKRRGIKPDVITYTVLLY 331
F R G++ Y + + C +K A +FQD M ++G PD +++ +L+
Sbjct: 695 SEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC-MFQDKMVKKGFSPDPVSFAAILH 753
Query: 332 G 332
G
Sbjct: 754 G 754
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 38/244 (15%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C LL+ L +G A K+ + M I++ +C+ GK + R L +
Sbjct: 172 ACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGR 231
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG------- 332
G+G P++V Y T+I YC++ ++ A +F+++K +G P + T+ ++ G
Sbjct: 232 WGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF 291
Query: 333 ----------------------------SFKNAAALDVINTI-WRDMKQTEISLDVVCYS 363
+++ +D +I W + + DV Y+
Sbjct: 292 VASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGW--IIANDCKPDVATYN 349
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+LIN L K E A+ ++ KGL P+ ++Y +I Y K AS+LL +M+ +
Sbjct: 350 ILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409
Query: 424 GMTP 427
G P
Sbjct: 410 GCKP 413
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/314 (18%), Positives = 112/314 (35%), Gaps = 42/314 (13%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + + E + D Y+ + D K + AI++ + ++ Y
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEA-RVAINNFDEME 120
T+LI G+C QG+ A F EM+ + P++VTY L + + A+ ++ M
Sbjct: 594 TSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMM 653
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
++ PN T +++G + +G A + +N+G
Sbjct: 654 TNKCVPNEVTFNCLLQG------------------------FVKKTSGKVLAEPDGSNHG 689
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
+ E F + + G + L LC+ G + A
Sbjct: 690 QSSLFS-----------------EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMF 732
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ M P + ++ +L C VG +K R++ +G V Y+ ++ +
Sbjct: 733 QDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLP 792
Query: 301 MNSLKEALDLFQDM 314
+ EA + M
Sbjct: 793 QPVICEASTILHAM 806
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 200/429 (46%), Gaps = 57/429 (13%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G +V K+ G+ LD + Y + D K G + A+ EE++ + + D+
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI G L+ + A + + M+ KG +PDI T+N++ + ++ + +D+M+
Sbjct: 542 YNVLISGM-LKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
S G++P+ + +++ LC GK+ EA N++ +EI+ +
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM--LMEIHPNLTT------------- 645
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
Y +FL+ S+K + ++ FK
Sbjct: 646 ----------------------YRIFLDTSSKHK--RADAIFKTH--------------- 666
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
ET+ S ++ S+ +Y+ ++ LC +G TK A + RGF PD VT+ ++++ Y
Sbjct: 667 -ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFV 725
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ +++AL + M GI P+V TY ++ G +A + ++ +MK + D
Sbjct: 726 GSHVRKALSTYSVMMEAGISPNVATYNTIIRG-LSDAGLIKEVDKWLSEMKSRGMRPDDF 784
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y+ LI+G K N + ++ ++ +MI GL P TY +IS + G M +A ELL EM
Sbjct: 785 TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Query: 421 SSKGMTPSS 429
+G++P++
Sbjct: 845 GKRGVSPNT 853
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 191/419 (45%), Gaps = 32/419 (7%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEM-REELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
G+ D +N + G V D + + ++ + D+ LI +C G L
Sbjct: 88 GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSF 147
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A + ++N+ D VTYN + +G+C + A A EM G+ P++ ++ +I+
Sbjct: 148 AISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLID 204
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G C VG A+A + + + ++ ++ +++ Y +
Sbjct: 205 GFCKVGNFVRAKALVDEISELNLITHTILLSSYYN------------------------L 240
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
+E+AY + D+ S ++ +LC G + + LL M ++V P+ + Y
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSS---IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTY 297
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+ ++D+L +HA +L+ V RG D+V YT +++ + L+EA F+ +
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
P+V+TYT L+ G K A L I M + + +VV YS +ING +K E
Sbjct: 358 DNQVPNVVTYTALVDGLCK-AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+A+ L M D+ + P+ TY +I +K G + A EL EM G+ +++I+ A+
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 198/418 (47%), Gaps = 34/418 (8%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ +++ SG D V ++ + + LCK GKV + + E+ ++ + YTTL+
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
A ++++M +G D+V Y VL G+ + + R A F + D PN
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ +++GLC G + AE ++ +KS V YS+M+N
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMIN----------------- 407
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
GY K ++E+A L ++ ++ + + ++ L G A++L + M
Sbjct: 408 -------GYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
R + VE + + +++ L +G+ K + L V +G T D + YT++I+ + +
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW--RDMKQTEISLDVVCY 362
+ AL ++M+ RG+ DV++Y VL+ G K + W + M++ I D+ +
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLK----FGKVGADWAYKGMREKGIEPDIATF 576
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
++++N K + E ++L++ M G++P ++ ++ + + G M+EA +L++M
Sbjct: 577 NIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 182/420 (43%), Gaps = 56/420 (13%)
Query: 30 FDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM-FNEMKNKG 88
A+C G V D+ + + +LI + + G + D + +++M G
Sbjct: 81 LSAMCTFGVVPDS----------------RLWNSLIHQFNVNGLVHDQVSLIYSKMIACG 124
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
PD+ NVL C+ AI+ + + + ++ T+ +I GLC G
Sbjct: 125 VSPDVFALNVLIHSFCKVGRLSFAIS---LLRNRVISIDTVTYNTVISGLCEHG------ 175
Query: 149 AHFNRLQDKSVEIYSAMVN-GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFL 207
L D++ + S MV G + + N D G+CKV +A L
Sbjct: 176 -----LADEAYQFLSEMVKMGILPDTVSYNTLID----------GFCKVGNFVRAKALVD 220
Query: 208 ELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL---NVEPSQIMYSIVLDALC 264
E+S L+T L+ + E R + +P + +S +++ LC
Sbjct: 221 EISE----------LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLC 270
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
GK L P+ VTYTT+++S + N + AL L+ M RGI D++
Sbjct: 271 KGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLV 330
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
YTVL+ G FK + T ++ ++ +VV Y+ L++GL K + A +
Sbjct: 331 VYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQ 389
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M++K + P+ VTY+ MI+ Y KKG+++EA LL +M + + P+ V + KA K
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 186/440 (42%), Gaps = 33/440 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK E + V Y + D LCK G + A + ++ K++ ++ Y+++I GY
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G L +A + +M+++ P+ TY + G+ + + +AI EM GVE N+
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGD----D 182
++ L +G++ E + + K V + Y+++++ + + +
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 183 KSPTPISEVGY----------CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
+ P V Y KV + AY+ E + DIA K G
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQ---G 587
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
D +KL + M+S ++PS + +IV+ LC GK + A + + + P++ TY
Sbjct: 588 DSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYR 647
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIW 347
+++ + + + GIK Y L+ G K AA +
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA------MVM 701
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
DM+ D V ++ L++G + A+ + M++ G+ P+ TY +I
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 408 GLMKEASELLDEMSSKGMTP 427
GL+KE + L EM S+GM P
Sbjct: 762 GLIKEVDKWLSEMKSRGMRP 781
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 159/349 (45%), Gaps = 28/349 (8%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+E GM D V+YN++ + K GKV A + +R K I+ DI + ++ QG+
Sbjct: 531 QERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
++++MK+ G KP +++ N++ +C N + AI+ ++M + PN TT+++
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 135 IEGLCSVGKVGEAEAHFNRLQ-------DKSVEIYSAMVNGYCEASNNNNN---YGDDKS 184
++ + K A+A F + S ++Y+ ++ C+ GD ++
Sbjct: 650 LD---TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 185 PTPISEV--------GYCKVDLVEKA---YELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
I + GY V KA Y + +E ++A + + L+ L+ +
Sbjct: 707 RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKE 766
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ K L M+S + P Y+ ++ +G K + +++ + G P TY
Sbjct: 767 VDK---WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNV 823
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
+I+ + + + +A +L ++M +RG+ P+ TY ++ G K DV
Sbjct: 824 LISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDV 872
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 186/452 (41%), Gaps = 47/452 (10%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ +D V Y ++ D L K G + +A + + L N ++ YT L+ G C G+L A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
++ +M K P++VTY+ + G + A++ +ME V PN T+ +I+G
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK-- 195
L GK ++ ++E+ M E NNY D + +G K
Sbjct: 444 LFKAGK-----------EEMAIELSKEMRLIGVE----ENNYILDALVNHLKRIGRIKEV 488
Query: 196 ----VDLVEKAYEL-----------FLE-------------LSNKGDIAKEESCFKLLTK 227
D+V K L F + + +G S L++
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 548
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
+ G +G A + MR +EP ++I++++ G ++ L+D G P
Sbjct: 549 MLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS 607
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
+++ ++ C ++EA+ + M I P++ TY + L S K+ A D I
Sbjct: 608 LMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA-DAIFKTH 666
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+ I L Y+ LI L K + A + DM +G PD VT+ ++ Y+
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAVNRSI 439
+++A M G++P+ + + R +
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+GM + + G D V +N + V A+ + I ++
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVAT 750
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y T+I+G G + + +EMK++G +PD TYN L +G + + ++ + EM
Sbjct: 751 YNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMI 810
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNN 176
+DG+ P ++T+ ++I +VGK+ +A + + V Y M++G C+ +
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHP 870
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ + K+ G K + EK Y
Sbjct: 871 DVEWNKKAMYLAEAKGLLKEMVEEKGY 897
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 197/450 (43%), Gaps = 31/450 (6%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+GM +++ +++ KE+G+ YN + + L VD A + E + I DI
Sbjct: 200 LGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVT 259
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y T+IKGYC G A +M+ +G + D +TY + + + + + EM+
Sbjct: 260 YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMD 319
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNN 176
G++ ++I GLC GK+ E F + K +V IY+ +++GY ++ +
Sbjct: 320 EKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS-- 377
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
VE A L + ++G + ++ LC G + +
Sbjct: 378 ----------------------VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+ T R + + + YS ++D L G+ A LF+ +G T D Y +I+
Sbjct: 416 ALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 475
Query: 297 SYCRMNSLKEALDLFQDM-KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++ + + EA+ LF+ M + G V TYT+LL G FK + + +W M I
Sbjct: 476 AFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALK-LWDMMIDKGI 534
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ C+ L GL + A ++ +++ G+ D DMI+ K G +KEA +
Sbjct: 535 TPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMINTLCKAGRIKEACK 593
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARKV 445
L D ++ +G I + + ++ K K
Sbjct: 594 LADGITERGREVPGRIRTVMINALRKVGKA 623
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 193/425 (45%), Gaps = 27/425 (6%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A N + + KLG V++ + + +++ I+ + Y L+ G + A +F M
Sbjct: 189 AANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
++ KPDIVTYN + G C+ + + A+ +ME+ G E + T+ +I+ +
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDF 308
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV--GYCKVDLVEKA 202
G A + + +K +++ P S V G CK + +
Sbjct: 309 GSCVALYQEMDEKGIQV----------------------PPHAFSLVIGGLCKEGKLNEG 346
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
Y +F + KG L+ G + A++LL M +P + YS+V++
Sbjct: 347 YTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNG 406
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
LC G+ + A F + G + + Y+++I+ + + EA LF++M +G D
Sbjct: 407 LCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTE-ISLDVVCYSVLINGLMKTDNYEDAIRL 381
Y L+ +F +D +++ M++ E V Y++L++G+ K E+A++L
Sbjct: 467 SYCYNALI-DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
++ MIDKG+ P + + + G + A ++LDE++ G+ + +N ++ K
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMIN-TLCK 584
Query: 442 ARKVQ 446
A +++
Sbjct: 585 AGRIK 589
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 168/371 (45%), Gaps = 35/371 (9%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
+++ Y +L+ L ++ ++ +E+K F + N L + + +
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEA 172
+M+ +G+EP T+ ++ GL S V AE F ++ ++ Y+ M+ GYC+A
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 173 SNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
+KA E ++ +G A + + ++
Sbjct: 271 GQT------------------------QKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
D G + L + M ++ +S+V+ LC GK ++F++ + +G P+V YT
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIWRD 349
+I+ Y + S+++A+ L M G KPDV+TY+V++ G KN ALD +T D
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
++++ + YS LI+GL K ++A RLFE+M +KG D Y +I + K
Sbjct: 427 ----GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 410 MKEASELLDEM 420
+ EA L M
Sbjct: 483 VDEAIALFKRM 493
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 167/356 (46%), Gaps = 27/356 (7%)
Query: 4 DSD---VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
DSD V ++E E G+ + A+++V LCK GK+++ + E + K ++
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
YT LI GY G++ DA + + M ++GFKPD+VTY+V+ G+C+N A++ F
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNN 176
DG+ NS + +I+GL G+V EAE F + +K Y+A+++ + + +
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 177 ----------NNYGDDKS--PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
G D++ I G K E+A +L+ + +KG I +CF+
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG-ITPTAACFRA 543
Query: 225 L-TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L T LCL G + +A K+L+ + + V ++ + LC G+ K A L D RG
Sbjct: 544 LSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCKAGRIKEACKLADGITERG 602
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQD-----MKRRGIKPDVITYTVLLYGSF 334
T MIN+ ++ A+ L +R G + +T LL F
Sbjct: 603 REVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETCF 658
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 164/401 (40%), Gaps = 43/401 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++K ++ + G D + Y + A + + +E+ K I + +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ +I G C +G L + + +F M KG KP++ Y VL G ++ AI M
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNN 177
+G +P+ T+ +++ GLC G+V EA +F+ + + I YS++++G +A
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR--- 447
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGK 236
V++A LF E+S KG ++ C+ L+ + +
Sbjct: 448 ---------------------VDEAERLFEEMSEKG-CTRDSYCYNALIDAFTKHRKVDE 485
Query: 237 AMKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A+ L + M + + Y+I+L + + + A L+D + +G TP + +
Sbjct: 486 AIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALS 545
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDV----ITYTVLLYGSFKNAAAL-DVINTIWRDM 350
C + A + ++ G+ D + T+ G K A L D I R++
Sbjct: 546 TGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREV 605
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
+V+IN L K + A++L I G E
Sbjct: 606 PGR-------IRTVMINALRKVGKADLAMKLMHSKIGIGYE 639
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%)
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
P ++ L SF ++ + +WR MK+ I + Y+ L+NGL+ + A R
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
+FE M ++PD VTY MI Y K G ++A E L +M ++G
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 37/445 (8%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
VD+F F G+ + + + ++ ++ A E E + + L+ + I+
Sbjct: 227 VDQFGIFPSRGVCIS------LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRK 280
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
YC G + + MK+ G +PDIV + V +C+ + A + +++ G+ +
Sbjct: 281 YCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQD 340
Query: 128 STTHKMIIEGLCSVGKVGEA--EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD-KS 184
S + +I+G C VGK EA H RL+ ++ +YS+ ++ C GD ++
Sbjct: 341 SVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-PNIFVYSSFLSNICST-------GDMLRA 392
Query: 185 PTPISEV-----------------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
T E+ GYC + +KA++ F L G+ + L+
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
G I A + M++ ++ + Y+ ++ + L D G +PD
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
V TY +I+S + EA ++ ++ RRG P + +T ++ G F +W
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI-GGFSKRGDFQEAFILW 571
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
M + DVV S L++G K E AI LF ++D GL+PD V Y +I Y
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 408 GLMKEASELLDEMSSKGMTP--SSH 430
G +++A EL+ M +GM P S+H
Sbjct: 632 GDIEKACELIGLMVQRGMLPNESTH 656
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 161/343 (46%), Gaps = 21/343 (6%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+ V+ K K F G+ D V+ + V D CK+GK ++AI++ R++ +I Y++
Sbjct: 326 TSVLFKLKLF---GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP---NIFVYSSF 379
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ C G+++ A +F E+ G PD V Y + G C A F + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYG 180
P+ TT ++I G + +AE+ F ++ + +++ Y+ +++GY + N +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 181 --DDKSPTPIS-EVGYCKVDL--------VEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
D+ IS +V + + +++A E+ EL +G + + ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
GD +A L M L ++P + S +L C + + A LF+ + G PDVV
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
Y T+I+ YC + +++A +L M +RG+ P+ T+ L+ G
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 4/178 (2%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
G SD F+ K G+ LD V YN + K +++ E+ +E+R I D+
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI ++G + +A + +E+ +GF P + + + G + + + A + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASN 174
++P+ T ++ G C ++ +A FN+L D V +Y+ +++GYC +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 8/243 (3%)
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
V A +L ++ G C LL ++ V + A + +E M S + + S+
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+ C G L G PD+V +T I+ C+ LKEA + +K G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
I D ++ + ++ G K + I I + ++ YS ++ + T + A
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLI----HSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE----LLDEMSSKGMTPSSHIISA 434
+F+++ + GL PD V YT MI Y G +A + LL + +T S+ +I A
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 435 VNR 437
+R
Sbjct: 453 CSR 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMR---EELRVKNIDLDIKHYTTLIKGYC 69
E G +A+ V K G +A + +LR+K D+ + L+ GYC
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP---DVVTCSALLHGYC 594
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ A +FN++ + G KPD+V YN L G C + A M G+ PN +
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 130 THKMIIEGL 138
TH ++ GL
Sbjct: 655 THHALVLGL 663
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 193/445 (43%), Gaps = 37/445 (8%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
VD+F F G+ + + + ++ ++ A E E + + L+ + I+
Sbjct: 227 VDQFGIFPSRGVCIS------LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRK 280
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
YC G + + MK+ G +PDIV + V +C+ + A + +++ G+ +
Sbjct: 281 YCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQD 340
Query: 128 STTHKMIIEGLCSVGKVGEA--EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD-KS 184
S + +I+G C VGK EA H RL+ ++ +YS+ ++ C GD ++
Sbjct: 341 SVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-PNIFVYSSFLSNICST-------GDMLRA 392
Query: 185 PTPISEV-----------------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
T E+ GYC + +KA++ F L G+ + L+
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
G I A + M++ ++ + Y+ ++ + L D G +PD
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPD 512
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
V TY +I+S + EA ++ ++ RRG P + +T ++ G F +W
Sbjct: 513 VATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI-GGFSKRGDFQEAFILW 571
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
M + DVV S L++G K E AI LF ++D GL+PD V Y +I Y
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSV 631
Query: 408 GLMKEASELLDEMSSKGMTP--SSH 430
G +++A EL+ M +GM P S+H
Sbjct: 632 GDIEKACELIGLMVQRGMLPNESTH 656
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 161/343 (46%), Gaps = 21/343 (6%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+ V+ K K F G+ D V+ + V D CK+GK ++AI++ R++ +I Y++
Sbjct: 326 TSVLFKLKLF---GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP---NIFVYSSF 379
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ C G+++ A +F E+ G PD V Y + G C A F + G
Sbjct: 380 LSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGN 439
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYG 180
P+ TT ++I G + +AE+ F ++ + +++ Y+ +++GY + N +
Sbjct: 440 PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFE 499
Query: 181 --DDKSPTPIS-EVGYCKVDL--------VEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
D+ IS +V + + +++A E+ EL +G + + ++
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
GD +A L M L ++P + S +L C + + A LF+ + G PDVV
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
Y T+I+ YC + +++A +L M +RG+ P+ T+ L+ G
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 83/178 (46%), Gaps = 4/178 (2%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
G SD F+ K G+ LD V YN + K +++ E+ +E+R I D+
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVAT 515
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y LI ++G + +A + +E+ +GF P + + + G + + + A + M
Sbjct: 516 YNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMA 575
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASN 174
++P+ T ++ G C ++ +A FN+L D V +Y+ +++GYC +
Sbjct: 576 DLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGD 633
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 8/243 (3%)
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
V A +L ++ G C LL ++ V + A + +E M S + + S+
Sbjct: 217 VNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSL 276
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+ C G L G PD+V +T I+ C+ LKEA + +K G
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFG 336
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
I D ++ + ++ G K + I I + ++ YS ++ + T + A
Sbjct: 337 ISQDSVSVSSVIDGFCKVGKPEEAIKLI----HSFRLRPNIFVYSSFLSNICSTGDMLRA 392
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE----LLDEMSSKGMTPSSHIISA 434
+F+++ + GL PD V YT MI Y G +A + LL + +T S+ +I A
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 435 VNR 437
+R
Sbjct: 453 CSR 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMR---EELRVKNIDLDIKHYTTLIKGYC 69
E G +A+ V K G +A + +LR+K D+ + L+ GYC
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKP---DVVTCSALLHGYC 594
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ A +FN++ + G KPD+V YN L G C + A M G+ PN +
Sbjct: 595 KAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNES 654
Query: 130 THKMIIEGL 138
TH ++ GL
Sbjct: 655 THHALVLGL 663
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 177/386 (45%), Gaps = 36/386 (9%)
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G + A +F G+ + ++ L + R+ AI+ F+ M+ G+ PN T+
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 132 KMIIEGLCSVG--KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+I+ C G + + F+ +Q V+ N S
Sbjct: 307 NAVIDA-CGKGGMEFKQVAKFFDEMQRNGVQPDRITFN---------------------S 344
Query: 190 EVGYC-KVDLVEKAYELFLELSNKGDIAKEESCFK---LLTKLCLVGDIGKAMKLLETMR 245
+ C + L E A LF E++N+ E+ F LL +C G + A ++L M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNR---RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+ P+ + YS V+D G+ A +LF G D V+Y T+++ Y ++ +
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
EALD+ ++M GIK DV+TY LL G + D + ++ +MK+ + +++ YS L
Sbjct: 462 EALDILREMASVGIKKDVVTYNALL-GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+G K Y++A+ +F + GL D V Y+ +I K GL+ A L+DEM+ +G+
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 426 TPS----SHIISAVNRSILKARKVQF 447
+P+ + II A RS R +
Sbjct: 581 SPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 190/436 (43%), Gaps = 61/436 (13%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
G + + L + GKV A + E + ++ LI Y G +A +F
Sbjct: 232 QGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRND-EARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
N MK G +P++VTYN + + E + FDEM+ +GV+P+ T ++ +CS
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCS 350
Query: 141 VGKVGEAEAHF-----NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV---- 191
G + EA + NR ++ V Y+ +++ C+ + + + + P+ +
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF-EILAQMPVKRIMPNV 409
Query: 192 --------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
G+ K ++A LF E+ G S LL+ VG +A+ +L
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M S+ ++ + Y+ +L GK + +F P+++TY+T+I+ Y +
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
KEA+++F++ K G++ DV+ Y+ L +D +C
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSAL---------------------------IDALCK- 561
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
NGL+ + A+ L ++M +G+ P+ VTY +I + + M +++ S+
Sbjct: 562 ---NGLVGS-----AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY----SNG 609
Query: 424 GMTP-SSHIISAVNRS 438
G P SS +SA+ +
Sbjct: 610 GSLPFSSSALSALTET 625
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 197/447 (44%), Gaps = 55/447 (12%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLG-KVDDAIEMREELRVKNIDLDIKH 60
G+ + + F KE G+ + V YN V DA K G + + +E++ + D
Sbjct: 282 GLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 61 YTTLIKGYCLQGNLIDAFY-MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ +L+ C +G L +A +F+EM N+ + D+ +YN L +C+ + +A +M
Sbjct: 342 FNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY 179
+ PN ++ +I+G G+ EA F ++ + + N
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI------- 453
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK--- 236
Y KV E+A ++ E+++ G I K+ ++T L+G GK
Sbjct: 454 -------------YTKVGRSEEALDILREMASVG-IKKD-----VVTYNALLGGYGKQGK 494
Query: 237 ---AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
K+ M+ +V P+ + YS ++D G K A +F F G DVV Y+
Sbjct: 495 YDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSA 554
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGS---------FKNAAALDV 342
+I++ C+ + A+ L +M + GI P+V+TY ++ +G + N +L
Sbjct: 555 LIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPF 614
Query: 343 INTIWRDMKQTEISLDVVCYSVLI--NGLMKTDNYEDAIR-------LFEDMIDKGLEPD 393
++ + +TE + + + L + T + E+ ++ +F M ++P+
Sbjct: 615 SSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPN 674
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEM 420
VT++ +++ + ++AS LL+E+
Sbjct: 675 VVTFSAILNACSRCNSFEDASMLLEEL 701
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 207/462 (44%), Gaps = 38/462 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ ++ F G+ + V +LCK + + A ++ +L L+ +
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 64 LIKGYCLQGNL-----IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
L+ CL N+ D +E+K +PD+VT +L +C++ A+ F++
Sbjct: 300 LLS--CLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 119 MES----DG--VEPNSTTHKMIIEGLCSVGKVGEAEAHFNR--LQDKSVE---IYSAMVN 167
M DG ++ +S +I+GLC VG++ EAE R L+++ V Y+ +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 168 GYCEASNNN------NNYGDDKSPTPISEV-----GYCKVDLVEKAYELFLELSNKGDIA 216
GYC A + +D+ + V G C+ + A F+++ +G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 217 KEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
+ L+ C V ++ KAM E M P +Y ++ LC V + A +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSF 334
+ GF+ D++ Y +I +C N+ ++ ++ DM++ G KPD ITY L+ +G
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM-IDKGLEPD 393
K+ + + + M++ + V Y +I+ ++A++LF+DM + + P+
Sbjct: 595 KD---FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
V Y +I+ + K G +A L +EM K + P+ +A+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 122/310 (39%), Gaps = 51/310 (16%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
+ V YN + D C+ GK++ A E+ ++ I ++ T++ G C L A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+M+ +G K ++VTY L C A+ +++M G P++ + +I GLC V
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 142 GKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNY-------GDDKSP----- 185
+ +A +L++ + Y+ ++ +C+ +N Y + K P
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 186 -TPISEVG---------------------------------YCKVDLVEKAYELFLELSN 211
T IS G YC V +++A +LF ++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 212 KGDIAKEESCFKLL-TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
+ + +L +G+ G+A+ L E M+ V P+ Y+ + L + +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 271 HARSLFDSFV 280
L D V
Sbjct: 705 TLLKLMDEMV 714
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 207/462 (44%), Gaps = 38/462 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ ++ F G+ + V +LCK + + A ++ +L L+ +
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNA 299
Query: 64 LIKGYCLQGNL-----IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
L+ CL N+ D +E+K +PD+VT +L +C++ A+ F++
Sbjct: 300 LLS--CLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILINTLCKSRRVDEALEVFEQ 354
Query: 119 MES----DG--VEPNSTTHKMIIEGLCSVGKVGEAEAHFNR--LQDKSVE---IYSAMVN 167
M DG ++ +S +I+GLC VG++ EAE R L+++ V Y+ +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLID 414
Query: 168 GYCEASNNN------NNYGDDKSPTPISEV-----GYCKVDLVEKAYELFLELSNKGDIA 216
GYC A + +D+ + V G C+ + A F+++ +G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 217 KEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
+ L+ C V ++ KAM E M P +Y ++ LC V + A +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSF 334
+ GF+ D++ Y +I +C N+ ++ ++ DM++ G KPD ITY L+ +G
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM-IDKGLEPD 393
K+ + + + M++ + V Y +I+ ++A++LF+DM + + P+
Sbjct: 595 KD---FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
V Y +I+ + K G +A L +EM K + P+ +A+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 60/365 (16%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEM--REELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFY 79
D + +N + D LCK+G++ +A E+ R +L + + + Y LI GYC G L A
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVT-YNCLIDGYCRAGKLETAKE 427
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+ + MK KP++VT N + G+CR+ +A+ F +ME +GV+ N T+ +I C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 140 SVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY-- 193
SV V +A + ++ + +IY A+++G C+ +++ + + E G+
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI---RVVEKLKEGGFSL 544
Query: 194 ------------CKVDLVEKAYELFLELSNKGDIAKE----------------ESCFKLL 225
C + EK YE+ ++ +G ES +++
Sbjct: 545 DLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMM 604
Query: 226 TKL-------------------CLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCH 265
++ C VG++ +A+KL + M V P+ ++Y+I+++A
Sbjct: 605 EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSK 664
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
+G A SL + + P+V TY + + L L +M + +P+ IT
Sbjct: 665 LGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQIT 724
Query: 326 YTVLL 330
+L+
Sbjct: 725 MEILM 729
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 29/258 (11%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+++ E+G D Y + LC++ + DAI + E+L+ LD+ Y LI +C
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ N + M +M+ +G KPD +TYN L + ++ + ++M DG++P TT
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQ-----DKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
+ +I+ CSVG++ EA F + + + IY+ ++N + + N +G
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN----FGQ---- 670
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+S K+ +V E + + FK L + + +KL++ M
Sbjct: 671 -ALSLKEEMKMKMVRPNVETY------------NALFKCLNEKTQGETL---LKLMDEMV 714
Query: 246 SLNVEPSQIMYSIVLDAL 263
+ EP+QI I+++ L
Sbjct: 715 EQSCEPNQITMEILMERL 732
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 199/448 (44%), Gaps = 25/448 (5%)
Query: 1 MGMDSDVVDKFKEF--KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDI 58
+G D+ V KF + K+ G D AYN L + G A ++ E + +
Sbjct: 134 LGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSE 193
Query: 59 KHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
K + LI+ + + +Y++ +MK GFKP + YN + + +N +A+ +++
Sbjct: 194 KQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYED 253
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASN 174
+ DG+ STT ++++GLC G++ E R+++ V Y+AM+ N
Sbjct: 254 FKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGN 313
Query: 175 NNNNY-------GDDKSPTPISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFK 223
+ + D+ P ++ VG CK VE+ YELF+E+ K + E
Sbjct: 314 LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRV 373
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L+ G + A L E + +Y+ V+ LC V + A LF +
Sbjct: 374 LIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEE 433
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK-PDVIT--YTVLLYGSFKNAAAL 340
PD T + ++ +Y MN L + ++ + + G D +T + +L KNA AL
Sbjct: 434 LEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMAL 493
Query: 341 DVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
DV + +T+ V Y++L+ L K + + ++ LF +M G EPD +Y+
Sbjct: 494 DVFYIL-----KTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIA 548
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPS 428
I + +KG +K A +++ PS
Sbjct: 549 ICCFVEKGDVKAACSFHEKIIEMSCVPS 576
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 191/445 (42%), Gaps = 57/445 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+++FKE G+ + + I+ LCK G++++ +E+ + +R D+ YT +IK
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+GNL + +++EM+ KPD++ Y L G+C++ F EM+ + +
Sbjct: 311 EGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREI 370
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNY------- 179
++++IEG + GKV A + L D + IY+A++ G C + + Y
Sbjct: 371 YRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 180 -----GDDKSPTP--------------------ISEVGYCKVDLVEKAYEL--------- 205
D ++ +P I E+GY D + + ++L
Sbjct: 431 EEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNA 490
Query: 206 -----FLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
F L KG S + +L + L +GDI K++ L MR L EP YSI
Sbjct: 491 MALDVFYILKTKGH--GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIA 548
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD-MKRRG 318
+ G K A S + + P + Y ++ C++ + + L ++ +
Sbjct: 549 ICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVE 608
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
P Y + + K + A V+ + +M Q + ++ V Y +I+G+ K + A
Sbjct: 609 SGPMEFKYALTVCHVCKGSNAEKVMKVV-DEMNQEGVFINEVIYCAIISGMSKHGTIKVA 667
Query: 379 IRLFEDMIDKGL--EPDKVTYTDMI 401
+F ++ + + E D V Y +M+
Sbjct: 668 REVFTELKKRKVMTEADMVVYEEML 692
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG-KAMKLLETMRSLNVEPSQIMYSIV 259
+A + EL + E F++L ++ G + + E M+ +P +Y+ +
Sbjct: 175 RAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRI 234
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+DAL G A ++++ F G + T+ ++ C+ ++E L++ Q M+
Sbjct: 235 MDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLC 294
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
KPDV YT ++ + + LD +W +M++ EI DV+ Y L+ GL K E
Sbjct: 295 KPDVFAYTAMI-KTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGY 353
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSI 439
LF +M K + D+ Y +I + G ++ A L +++ G I +AV + +
Sbjct: 354 ELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGL 413
Query: 440 LKARKV 445
+V
Sbjct: 414 CSVNQV 419
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 205/462 (44%), Gaps = 38/462 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ ++ F G+ + V +LCK + + A ++ +L L+ +
Sbjct: 240 EEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNA 299
Query: 64 LIKGYCLQGNL-----IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
L+ CL N+ D +E+K +PD+VT +L +C++ A+ F++
Sbjct: 300 LLS--CLGRNMDISRMNDLVLKMDEVK---IRPDVVTLGILINTLCKSRRVDEALEVFEK 354
Query: 119 MES----DG--VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ-----DKSVEIYSAMVN 167
M DG ++ +S +I+GLC VG++ EAE R++ + Y+ +++
Sbjct: 355 MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLID 414
Query: 168 GYCEASNNN------NNYGDDKSPTPISEV-----GYCKVDLVEKAYELFLELSNKGDIA 216
GYC A + +D+ + V G C+ + A F+++ +G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 217 KEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
+ L+ C V ++ KAM E M P +Y ++ LC V + A +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSF 334
+ GF+ D++ Y +I +C N+ ++ ++ DM++ G KPD ITY L+ +G
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM-IDKGLEPD 393
K+ + + + M++ + V Y +I+ ++A++LF+DM + + P+
Sbjct: 595 KD---FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
V Y +I+ + K G +A L +EM K + P+ +A+
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 161/364 (44%), Gaps = 58/364 (15%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIKHYTTLIKGYCLQGNLIDAFYM 80
D + +N + D LCK+G++ +A E+ ++++ + Y LI GYC G L A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
+ MK KP++VT N + G+CR+ +A+ F +ME +GV+ N T+ +I CS
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 141 VGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY--- 193
V V +A + ++ + +IY A+++G C+ +++ + + E G+
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI---RVVEKLKEGGFSLD 545
Query: 194 -----------CKVDLVEKAYELFLELSNKGDIAKE----------------ESCFKLLT 226
C + EK YE+ ++ +G ES +++
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 227 KL-------------------CLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCHV 266
++ C VG++ +A+KL + M V P+ ++Y+I+++A +
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G A SL + + P+V TY + + L L +M + +P+ IT
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 327 TVLL 330
+L+
Sbjct: 726 EILM 729
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 29/258 (11%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+++ E+G D Y + LC++ + DAI + E+L+ LD+ Y LI +C
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ N + M +M+ +G KPD +TYN L + ++ + ++M DG++P TT
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQ-----DKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
+ +I+ CSVG++ EA F + + + IY+ ++N + + N +G
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN----FGQ---- 670
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+S K+ +V E + + FK L + + +KL++ M
Sbjct: 671 -ALSLKEEMKMKMVRPNVETY------------NALFKCLNEKTQGETL---LKLMDEMV 714
Query: 246 SLNVEPSQIMYSIVLDAL 263
+ EP+QI I+++ L
Sbjct: 715 EQSCEPNQITMEILMERL 732
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 194/444 (43%), Gaps = 74/444 (16%)
Query: 5 SDVVDKFKEFKESG-----MFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIK 59
S++ + FK+ ES FL G+ ++ FD L D ++ ++ + LD
Sbjct: 121 SELFEPFKDKPESTSSELLAFLKGLGFHKKFD--LALRAFDWFMKQKDYQSM----LDNS 174
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+I +G + A MFN ++ GF D+ +Y L + + R A+N F +M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY 179
E DG +P T+ +I L GK+G
Sbjct: 235 EEDGCKPTLITYNVI---LNVFGKMG---------------------------------- 257
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGD-IAKEESCFKLLTKLCLVGDIGK-A 237
TP +++ LVEK K D IA + + L C G + + A
Sbjct: 258 ------TPWNKI----TSLVEKM---------KSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
++ E M++ ++ Y+ +LD + K A + + V GF+P +VTY ++I++
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
Y R L EA++L M +G KPDV TYT LL G F+ A ++ +I+ +M+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG-FERAGKVESAMSIFEEMRNAGCKP 417
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
++ ++ I + + +++F+++ GL PD VT+ +++++ + G+ E S +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 418 DEMSSKGMTPSSH----IISAVNR 437
EM G P +ISA +R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSR 501
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 171/434 (39%), Gaps = 21/434 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + ++ + E G D Y + + GKV+ A+ + EE+R +I +
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
IK Y +G + +F+E+ G PDIVT+N L A +N F EM+
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 482
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G P T +I G +A + R+ D V + N A +
Sbjct: 483 AGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQ 542
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+ E G CK + E Y L G +IG L
Sbjct: 543 SEKVLAEMEDGRCKPN--ELTYCSLLHAYANGK------------------EIGLMHSLA 582
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E + S +EP ++ ++ A F RGF+PD+ T +M++ Y R
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
+ +A + MK RG P + TY L+Y +A I R++ I D++
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMY-MHSRSADFGKSEEILREILAKGIKPDIIS 701
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y+ +I + DA R+F +M + G+ PD +TY I Y + +EA ++ M
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 422 SKGMTPSSHIISAV 435
G P+ + +++
Sbjct: 762 KHGCRPNQNTYNSI 775
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 201/471 (42%), Gaps = 73/471 (15%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAI-EMREELRVKNIDLDIKH 60
G + V+ FK+ +E G + YN++ + K+G + I + E+++ I D
Sbjct: 222 GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYT 281
Query: 61 YTTLIKGYCLQGNL-IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
Y TLI C +G+L +A +F EMK GF D VTYN L ++ + A+ +EM
Sbjct: 282 YNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNN 175
+G P+ T+ +I G + EA N++ +K V Y+ +++G+ A
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK- 399
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESC-FKLLTKLCLVGDI 234
VE A +F E+ N G K C F K + G+
Sbjct: 400 -----------------------VESAMSIFEEMRNAG--CKPNICTFNAFIK--MYGNR 432
Query: 235 GKAMKLLETMRSLNV---EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
GK ++++ +NV P + ++ +L G +F GF P+ T+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG------------------- 332
T+I++Y R S ++A+ +++ M G+ PD+ TY +L
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 333 ---------------SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
++ N + +++++ ++ I V L+ K D +
Sbjct: 553 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
A R F ++ ++G PD T M+S+Y ++ ++ +A+ +LD M +G TPS
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 183/422 (43%), Gaps = 24/422 (5%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D F + K+ LD I+ L K G+V A M L+ LD+ YT+LI +
Sbjct: 159 DWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAF 218
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-DEMESDGVEPN 127
G +A +F +M+ G KP ++TYNV+ + I + ++M+SDG+ P+
Sbjct: 219 ANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPD 278
Query: 128 STTHKMIIEGLCSVGKVGEAEAH-FNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ T+ +I C G + + A F ++ N + YG P
Sbjct: 279 AYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV------YGKSHRP- 330
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
++A ++ E+ G + L++ G + +AM+L M
Sbjct: 331 -------------KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+P Y+ +L GK + A S+F+ G P++ T+ I Y E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
+ +F ++ G+ PD++T+ LL F ++ ++++MK+ + ++ LI
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLL-AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+ + ++E A+ ++ M+D G+ PD TY +++ + G+ +++ ++L EM
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 427 PS 428
P+
Sbjct: 557 PN 558
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 10/257 (3%)
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K DL +A++ F++ + + +++ L G + A + ++
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVY 209
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS-LKEALDLFQD 313
Y+ ++ A + G+ + A ++F G P ++TY ++N + +M + + L +
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 314 MKRRGIKPDVITYTVLL----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
MK GI PD TY L+ GS AA ++ +MK S D V Y+ L++
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAA-----QVFEEMKAAGFSYDKVTYNALLDVY 324
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
K+ ++A+++ +M+ G P VTY +IS Y + G++ EA EL ++M+ KG P
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 430 HIISAVNRSILKARKVQ 446
+ + +A KV+
Sbjct: 385 FTYTTLLSGFERAGKVE 401
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 137/331 (41%), Gaps = 20/331 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GMDS+V FKE K +G + +N + A + G + A+ + + + D+ Y
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T++ G + + EM++ KP+ +TY L E + + +E+ S
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+EP + K ++ + EAE F+ L+++ +N
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSI--------- 638
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
Y + +V KA + + +G + L+ D GK+ ++L
Sbjct: 639 -----------YGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + ++P I Y+ V+ A C + + A +F G PDV+TY T I SY
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
+ +EA+ + + M + G +P+ TY ++ G
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 778
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
KE G YN + + + E+ E+ K I DI Y T+I YC +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
DA +F+EM+N G PD++TYN + AI M G PN T+ I
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 135 IEGLCSVGKVGEAE 148
++G C + + EA+
Sbjct: 776 VDGYCKLNRKDEAK 789
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 194/439 (44%), Gaps = 29/439 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELR-VKNIDLDIKH 60
G+ + V F+ K+ G+ + +N + L K G+ A ++ +E+R + D
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM- 119
+ TLI G+C + +AF +F +M+ PD+VTYN + G+CR + ++A N M
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 120 -ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN 174
++ V PN ++ ++ G C ++ EA F+ + + ++ Y+ ++ G EA
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 175 NN-------------NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESC 221
+ + D I +C ++ A ++F E+ N S
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 222 FKLLTKLCLVGDIGKAMKLLETMRSLNV-------EPSQIMYSIVLDALCHVGKTKHARS 274
L+ LC+ + +A L + V +P Y+ + + LC GKTK A
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 275 LFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF 334
+F + RG D +Y T+I +CR K A +L M RR PD+ TY +L+ G
Sbjct: 452 VFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLL 510
Query: 335 KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
K AL +T+ R ++ + + + +SVL L K ++ L M++K + +
Sbjct: 511 KIGEALLAHDTLQRMLRSSYLPVATTFHSVLAE-LAKRKFANESFCLVTLMLEKRIRQNI 569
Query: 395 VTYTDMISLYYKKGLMKEA 413
T ++ L + ++A
Sbjct: 570 DLSTQVVRLLFSSAQKEKA 588
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 170/389 (43%), Gaps = 40/389 (10%)
Query: 54 IDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAI 113
+ L +++ +LI+ Y G ++ +F MK G P ++T+N L + + + +A
Sbjct: 134 VKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAH 193
Query: 114 NNFDEMESD-GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEA 172
+ FDEM GV P+S T +I G C N + D++ I+ M +C
Sbjct: 194 DLFDEMRRTYGVTPDSYTFNTLINGFCK-----------NSMVDEAFRIFKDMELYHCNP 242
Query: 173 SNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG-DIAKEESCFKLLTK-LCL 230
N D G C+ V+ A+ + + K D+ + L + C+
Sbjct: 243 DVVTYNTIID---------GLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCM 293
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF----DSFVGRGFTP 286
+I +A+ + M S ++P+ + Y+ ++ L + + + D+F F P
Sbjct: 294 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT--FAP 351
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG-SFKNAAALDVINT 345
D T+ +I ++C L A+ +FQ+M + PD +Y+VL+ +N D T
Sbjct: 352 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE--FDRAET 409
Query: 346 IWRDMKQTEISLD-------VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
++ ++ + E+ L Y+ + L + A ++F ++ +G++ D +Y
Sbjct: 410 LFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYK 468
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTP 427
+I+ + ++G K A ELL M + P
Sbjct: 469 TLITGHCREGKFKPAYELLVLMLRREFVP 497
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 41/248 (16%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVT 290
G +++KL +TM+ + + PS + ++ +L L G+T A LFD G TPD T
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ T+IN +C+ + + EA +F+DM+ PDV+TY ++ G + A + + + + M
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCR-AGKVKIAHNVLSGM 270
Query: 351 --KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY----------- 397
K T++ +VV Y+ L+ G ++A+ +F DM+ +GL+P+ VTY
Sbjct: 271 LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAH 330
Query: 398 --------------------------TDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+I + G + A ++ EM + + P S
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 432 ISAVNRSI 439
S + R++
Sbjct: 391 YSVLIRTL 398
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 7/232 (3%)
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM-RSLN--VEPSQIMYSIVL 260
F +SNKG KE+S F +L L ++ A L ++ R N V+ ++ ++
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR-GI 319
+ + G + + LF + G +P V+T+ ++++ + A DLF +M+R G+
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGV 205
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
PD T+ L+ G KN+ +D I++DM+ + DVV Y+ +I+GL + + A
Sbjct: 206 TPDSYTFNTLINGFCKNSM-VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264
Query: 380 RLFEDMIDKG--LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ M+ K + P+ V+YT ++ Y K + EA + +M S+G+ P++
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ ++I SY +E++ LFQ MK+ GI P V+T+ LL K + + ++ +M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRT-GMAHDLFDEM 199
Query: 351 KQT-EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
++T ++ D ++ LING K ++A R+F+DM PD VTY +I + G
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 410 MKEASELLDEMSSKGMTPSSHIIS 433
+K A +L M K +++S
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVS 283
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 34/346 (9%)
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M G +PD+VT+ L G+C A+ D M +G +P T II GLC +G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGT----IINGLCKMGD 56
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
A +++++ ++ IY+A+++ C+ ++ +
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH---------------------- 94
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
A LF E+ +KG + ++ C G A +LL M + P + +S +
Sbjct: 95 --AQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL 152
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
++AL GK A ++ + RG P +TY +MI+ +C+ + L +A + M +
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
PDV+T++ L+ G K A +D I+ +M + I + V Y+ LI+G + + + A
Sbjct: 213 SPDVVTFSTLINGYCK-AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 380 RLFEDMIDKGLEPDKVTYTDMI-SLYYKKGLMKEASELLDEMSSKG 424
L MI G+ P+ +T+ M+ SL KK L K + L D S+G
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 147/310 (47%), Gaps = 25/310 (8%)
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
M G P+ T ++ GLC G+V +A A +R+ ++ + Y ++NG C+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCK------- 53
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
GD +S ++L+ K E + K + + ++ +LC G A
Sbjct: 54 MGDTESA----------LNLLSKMEETHI----KAHVVIYNA---IIDRLCKDGHHIHAQ 96
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
L M + P I YS ++D+ C G+ A L + R PDVVT++ +IN+
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
+ + EA +++ DM RRGI P ITY ++ G F L+ + M S D
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG-FCKQDRLNDAKRMLDSMASKSCSPD 215
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
VV +S LING K ++ + +F +M +G+ + VTYT +I + + G + A +LL+
Sbjct: 216 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLN 275
Query: 419 EMSSKGMTPS 428
M S G+ P+
Sbjct: 276 VMISSGVAPN 285
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 1/206 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ LC +GD A+ LL M +++ ++Y+ ++D LC G HA++LF +G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
PDV+TY+ MI+S+CR +A L +DM R I PDV+T++ L+ K +
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA- 165
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
I+ DM + I + Y+ +I+G K D DA R+ + M K PD VT++ +I+
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSS 429
Y K + E+ EM +G+ ++
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANT 251
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 147/333 (44%), Gaps = 33/333 (9%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D+ +TTL+ G C +G ++ A + + M +G +P Y + G+C+ + A+N
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEA 172
+ME ++ + + II+ LC G A+ F + DK V YS M++ +C +
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 173 SNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
+ E+ +E D+ + L K G
Sbjct: 125 GRWTD---------------------AEQLLRDMIERQINPDVVTFSALINALVK---EG 160
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ +A ++ M + P+ I Y+ ++D C + A+ + DS + +PDVVT++
Sbjct: 161 KVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
T+IN YC+ + +++F +M RRGI + +TYT L++G F LD + M
Sbjct: 221 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG-FCQVGDLDAAQDLLNVMIS 279
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
+ ++ + + + ++ L A + ED+
Sbjct: 280 SGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 5/222 (2%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
L+ LC G + +A+ L++ M VE Y +++ LC +G T+ A +L
Sbjct: 16 LMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETH 71
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
VV Y +I+ C+ A +LF +M +GI PDVITY+ ++ SF +
Sbjct: 72 IKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI-DSFCRSGRWTDA 130
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ RDM + +I+ DVV +S LIN L+K +A ++ DM+ +G+ P +TY MI
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ K+ + +A +LD M+SK +P S + KA++V
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 15/267 (5%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
Y + + LCK+G + A+ + ++ +I + Y +I C G+ I A +F EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
+KG PD++TY+ + CR+ A +M + P+ T +I L GKV
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 146 EAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNN-----NYGDDKSPTP----ISEV- 191
EAE + + + + Y++M++G+C+ N+ + KS +P S +
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 192 -GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
GYCK V+ E+F E+ +G +A + L+ C VGD+ A LL M S V
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVA 283
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFD 277
P+ I + +L +LC + + A ++ +
Sbjct: 284 PNYITFQSMLASLCSKKELRKAFAILE 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + G+F D + Y+ + D+ C+ G+ DA ++ ++ + I+ D+ ++ LI
Sbjct: 99 FTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVK 158
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G + +A ++ +M +G P +TYN + G C+ D A D M S P+ T
Sbjct: 159 EGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVT 218
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASN 174
+I G C +V F + + + Y+ +++G+C+ +
Sbjct: 219 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ + + + G+F + YN + D CK +++DA M + + K+ D+ +
Sbjct: 160 GKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTF 219
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+TLI GYC + + +F EM +G + VTY L G C+ + A + + M S
Sbjct: 220 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
GV PN T + ++ LCS ++ +A A LQ
Sbjct: 280 SGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 4/173 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G +D ++ E + D V ++ + +AL K GKV +A E+ ++ + I Y
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++I G+C Q L DA M + M +K PD+VT++ L G C+ + F EM
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYC 170
G+ N+ T+ +I G C VG + A+ N + V + +M+ C
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLC 297
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 197/432 (45%), Gaps = 18/432 (4%)
Query: 14 FKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN 73
K G++ A++ V + + G++ DA+++ ++ ++ ++ T I +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
L A M+ G P++VTYN + G C AI ++M S G P+ ++
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD---------KS 184
I+ LC ++ E ++ + + + +++ D+ +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 185 PTPISEVGY-------CKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVGDIGK 236
I ++GY CK + +A +L E+ +KG + + ++ C +G++ K
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A KLL+ M + +P+ + Y+ +L+ +C GK+ AR + + ++P+ +TY+ +++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
R L EA D+ ++M +G P + +LL ++ + + +
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA-RKFMEECLNKGCA 591
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
++VV ++ +I+G + D + A+ + +DM D TYT ++ KKG + EA+EL
Sbjct: 592 INVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATEL 651
Query: 417 LDEMSSKGMTPS 428
+ +M KG+ P+
Sbjct: 652 MKKMLHKGIDPT 663
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 188/438 (42%), Gaps = 32/438 (7%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
KE G+ D V YN + L K D+A+ ++ + K +D Y+ ++ C +G +
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRM 434
Query: 75 IDAFYMFNEMKNKGF-KPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
+A + NEM +KG PD+VTY + G CR E A M + G +PN+ ++
Sbjct: 435 SEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGY---------CEASNNNNNYG 180
++ G+C GK EA N ++ YS +++G C+ G
Sbjct: 495 LLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Query: 181 DDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
P I+ + C+ +A + E NKG + ++ C ++ A+
Sbjct: 555 FFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAAL 614
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+L+ M +N Y+ ++D L G+ A L + +G P VTY T+I+ Y
Sbjct: 615 SVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRY 674
Query: 299 CRMNSLKEALDLFQDM----KRRGIKPDVITYTVLLYGSFKNAAAL--DVINTIWRDMKQ 352
C+M + + + + + M K R I VI +L G + A L V+ T R +
Sbjct: 675 CQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVL-GKLEEADTLLGKVLRTASRSDAK 733
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
T CY+ L+ G +K A ++ M ++ L PD + KG + E
Sbjct: 734 T-------CYA-LMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDE 785
Query: 413 ASELLDEMSSKG-MTPSS 429
A +L+ + +G ++P S
Sbjct: 786 ADKLMLRLVERGHISPQS 803
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 121/233 (51%)
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K L + + + + + +G E+ +++ G + A+K+L M+ VEP+ +
Sbjct: 219 KTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLL 278
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
+ + +D + + A + G P+VVTY MI YC ++ ++EA++L +DM
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDM 338
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
+G PD ++Y ++ K ++V + + + K+ + D V Y+ LI+ L K D+
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDH 398
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
++A+ +D +KG DK+ Y+ ++ K+G M EA +L++EM SKG P
Sbjct: 399 ADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP 451
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 157/364 (43%), Gaps = 31/364 (8%)
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
MK +G ++ + R + R A+ M+ GVEPN I+ +
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 144 VGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+ +A R+Q +V Y+ M+ GYC+ + V
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCD------------------------LHRV 328
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM-RSLNVEPSQIMYSI 258
E+A EL ++ +KG + + S + ++ LC I + L++ M + + P Q+ Y+
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++ L A +GF D + Y+ ++++ C+ + EA DL +M +G
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 319 -IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
PDV+TYT ++ G F +D + + M + V Y+ L+NG+ +T +
Sbjct: 449 HCPPDVVTYTAVVNG-FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLE 507
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A + + P+ +TY+ ++ ++G + EA +++ EM KG P I+ + +
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 438 SILK 441
S+ +
Sbjct: 568 SLCR 571
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 119/257 (46%), Gaps = 7/257 (2%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
+ + + +EKA + G + + ++ C + + +A++LLE M S P
Sbjct: 287 FVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPD 346
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
++ Y ++ LC + R L G PD VTY T+I+ + + EAL
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+D + +G + D + Y+ +++ K + A D+IN + + + DVV Y+ ++NG
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---LSKGHCPPDVVTYTAVVNG 463
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ + A +L + M G +P+ V+YT +++ + G EA E+++ +P+
Sbjct: 464 FCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPN 523
Query: 429 SHIISAVNRSILKARKV 445
S S + + + K+
Sbjct: 524 SITYSVIMHGLRREGKL 540
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ D +E G F V N++ +LC+ G+ +A + EE K +++ ++
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TT+I G+C L A + ++M D+ TY L + + A +M
Sbjct: 598 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLH 657
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL--QDKSVEIYSAMVNGYC------EAS 173
G++P T++ +I C +GKV + A ++ + K IY+ ++ C EA
Sbjct: 658 KGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEAD 717
Query: 174 N------NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
+ D K+ + E GY K + AY++ + N+ I + C KL +
Sbjct: 718 TLLGKVLRTASRSDAKTCYALME-GYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKR 776
Query: 228 LCLVGDIGKAMKLL 241
L L G + +A KL+
Sbjct: 777 LVLKGKVDEADKLM 790
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
R ++Y +L+ L + +R + RG ++ ++ SY R L
Sbjct: 199 RQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQL 258
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
++AL + M+R G++P+++ + F A L+ M+ I +VV Y+
Sbjct: 259 RDALKVLTLMQRAGVEPNLLICNTTI-DVFVRANRLEKALRFLERMQVVGIVPNVVTYNC 317
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK- 423
+I G E+AI L EDM KG PDKV+Y ++ K+ + E +L+ +M+ +
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Query: 424 GMTP 427
G+ P
Sbjct: 378 GLVP 381
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 212/534 (39%), Gaps = 109/534 (20%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + F E G +LD I+ + CK G+VD A E+ E L ++I L+ K Y
Sbjct: 228 GKSERALSVFNEILSRG-WLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LI G+ + + AF +F +M+ G DI Y+VL G+C++ + +A++ + E++
Sbjct: 287 CVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGE----AEAHFNRLQDKSVE-IYSAMVNG-------- 168
G+ P+ ++ + LCS + E E + KSV +Y ++ G
Sbjct: 347 SGIPPD---RGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVH 403
Query: 169 --YCEASNNNNNYGDD-------------KSPTP----ISEVGYC--KVDLVEKAYELFL 207
Y N NY D K+ P +S V C K + V+ A L
Sbjct: 404 EAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH 463
Query: 208 ELSNKGDI----------------AKEESCFKLLTKL-------------CLVG------ 232
++ G I + E KLL ++ C+ G
Sbjct: 464 DIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC 523
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF-------- 284
D A+ LL+ MR EP + ++ LC G+ A D G GF
Sbjct: 524 DFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAST 583
Query: 285 ---------------------------TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
PDV+ Y +I + C+ EA LF +M +
Sbjct: 584 AAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G+KP V TY ++ G K ++ I R M + E + DV+ Y+ LI+GL + +
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVR-MYEDEKNPDVITYTSLIHGLCASGRPSE 702
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
AI + +M K P+++T+ +I K G EA EM K M P S +
Sbjct: 703 AIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAV 756
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 173/425 (40%), Gaps = 57/425 (13%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S++V K+ ++ + D + +IV + L K KVD A+ + ++ + Y +
Sbjct: 422 SEIVKLLKDHNKA-ILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I+G C +G ++ + EMK+ G +P T N + + + A++ +M G
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
EP +++ LC G+ +A + L D + E + G+ AS +
Sbjct: 541 EPWIKHTTFLVKKLCENGRAVDACKY---LDDVAGEGFL----GHMVASTAAID------ 587
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
G K + V++ ELF ++ G
Sbjct: 588 -------GLIKNEGVDRGLELFRDICANGHC----------------------------- 611
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
P I Y +++ ALC +T A LF+ V +G P V TY +MI+ +C+ +
Sbjct: 612 ------PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEI 665
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
L M PDVITYT L++G + + I W +MK + + + +
Sbjct: 666 DRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR-WNEMKGKDCYPNRITFMA 724
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI GL K +A+ F +M +K +EPD Y ++S + + + EM KG
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Query: 425 MTPSS 429
P S
Sbjct: 785 RFPVS 789
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 191/460 (41%), Gaps = 79/460 (17%)
Query: 48 ELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRN 106
EL + + +L+ K T++ G+ G A+ FN K +G++ D+ YN +A+ + R
Sbjct: 63 ELLILSPELNTKVVETVLNGFKRWGL---AYLFFNWASKQEGYRNDMYAYNAMASILSRA 119
Query: 107 DE-ARVAINNFDEMESDG-VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSA 164
+ A + D + S + P + I L + G V EA + F+R+++ + + +A
Sbjct: 120 RQNASLKALVVDVLNSRCFMSPGA--FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNA 177
Query: 165 MV-NGYCEASNNNNN------------------YGDDKSPTPISEVGYCKVDLVEKAYEL 205
N EA + +N+ + D + TP+ +V YC E+A +
Sbjct: 178 YTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQV-YCNTGKSERALSV 236
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
F E+ ++G + + S L+ C G + KA +L+E + ++ + Y +++
Sbjct: 237 FNEILSRGWLDEHISTI-LVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVK 295
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD--- 322
+ A LF+ G D+ Y +I C+ L+ AL L+ ++KR GI PD
Sbjct: 296 ESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGI 355
Query: 323 ------------------------------VITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
++ Y L G +N + + I M
Sbjct: 356 LGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGN 415
Query: 353 TE-----------------ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
E I D S++IN L+K + + A+ L D++ GL P +
Sbjct: 416 YESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM 475
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
Y ++I K+G +E+ +LL EM G+ PS ++ +
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/496 (19%), Positives = 193/496 (38%), Gaps = 71/496 (14%)
Query: 2 GMDSDVVDKFKEFKESGMFL-DGVAYNIVFDALCKLGKVD-DAIEMR-EELRVKNIDLDI 58
G+ + F +E G+ + + YN + +A+ K + +E R +E+R D
Sbjct: 155 GLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDK 214
Query: 59 KHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
T +++ YC G A +FNE+ ++G+ + ++ +L C+ + A +
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEM 273
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASN 174
+E + N T+ ++I G ++ +A F +++ + + +Y ++ G C+ +
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKD 333
Query: 175 NN-------------------------NNYGDDKSPTPISEV------------------ 191
++ ++ + I+EV
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLF 393
Query: 192 -GYCKVDLVEKAYELFLEL------------------SNKGDIAKEESCFKLLTKLCLVG 232
G+ + DLV +AY L NK + +S ++ L
Sbjct: 394 EGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ A+ LL + + P +MY+ +++ +C G+++ + L G P T
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN 513
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+ ALDL + M+ G +P + T L+ +N A+D + D+
Sbjct: 514 CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYL-DDVAG 572
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+V + I+GL+K + + + LF D+ G PD + Y +I K E
Sbjct: 573 EGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTME 632
Query: 413 ASELLDEMSSKGMTPS 428
A L +EM SKG+ P+
Sbjct: 633 ADILFNEMVSKGLKPT 648
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 198/462 (42%), Gaps = 32/462 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
KE ++SG + ++ + +LG ++ ++ + + Y +I
Sbjct: 133 LKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVK 192
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+L A+ F +M++ G KPD TYN+L GVC+ AI +ME +G PN T
Sbjct: 193 SNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFT 252
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVN--------------------GYC 170
+ ++I+G G+V EA ++ + + A + G+
Sbjct: 253 YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFM 312
Query: 171 EASNNNNNYGDDKSPTPISEVGYCKVD--LVEKAYELFLELSNKGDIAKEESCFKLLTKL 228
E +N G D V YC + + ++ + ++ +G I + S F
Sbjct: 313 EKDSNLQRVGYD-------AVLYCLSNNSMAKETGQFLRKIGERGYIP-DSSTFNAAMSC 364
Query: 229 CLVG-DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
L G D+ + ++ + S V+P Y +++ AL + + G
Sbjct: 365 LLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSS 424
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
V +Y +I+ C+ ++ A +M+ RGI P+++T+ L G + + ++ +
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG-YSVRGDVKKVHGVL 483
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+ DV+ +S++IN L + +DA F++M++ G+EP+++TY +I
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
G + +L +M G++P + +A +S K RKV+ E
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 178/434 (41%), Gaps = 31/434 (7%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + + K+ ++ G + Y I+ D G+VD+A++ E +RV+ ++ +
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATI 288
Query: 62 TTLIKGY--CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
T + G CL AF + K V Y+ + + N A+ ++
Sbjct: 289 RTFVHGIFRCLPP--CKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKI 346
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY---CEASNNN 176
G P+S+T + L + E F+ + V+ NGY +A N
Sbjct: 347 GERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVK---PGFNGYLVLVQALLNA 403
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+ + Y K ++ G ++ S ++ LC I
Sbjct: 404 QRFSEGDR--------YLK------------QMGVDGLLSSVYSYNAVIDCLCKARRIEN 443
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A L M+ + P+ + ++ L G K + + + GF PDV+T++ +IN
Sbjct: 444 AAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIIN 503
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
CR +K+A D F++M GI+P+ ITY +L+ S + D ++ MK+ +S
Sbjct: 504 CLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR-SCCSTGDTDRSVKLFAKMKENGLS 562
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D+ Y+ I K + A L + M+ GL+PD TY+ +I + G EA E+
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 417 LDEMSSKGMTPSSH 430
+ G P S+
Sbjct: 623 FSSIERHGCVPDSY 636
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 202 AYELFLELSNKGDI-AKEESCFKLL-TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
+ +L +SN + AK++S +L L G + +M+LL+ +R S + ++
Sbjct: 92 SLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVL 151
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ + +G K+ +F G P Y +I++ + NSL A FQ M+ G
Sbjct: 152 IGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGC 211
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
KPD TY +L++G K + I + + M+Q +V Y++LI+G + ++A+
Sbjct: 212 KPDRFTYNILIHGVCKKGVVDEAIRLV-KQMEQEGNRPNVFTYTILIDGFLIAGRVDEAL 270
Query: 380 RLFEDMIDKGLEPDKVT 396
+ E M + L P++ T
Sbjct: 271 KQLEMMRVRKLNPNEAT 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D D FKE E G+ + + YNI+ + C G D ++++ +++ + D+ Y I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+ +C + A + M G KPD TY+ L + + A F +E G
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 126 PNSTTHKMIIE 136
P+S T +++ E
Sbjct: 633 PDSYTKRLVEE 643
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 171/406 (42%), Gaps = 32/406 (7%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
Y I+ L + G +D +E+ +E+ + + + YT LI Y G + + + MK
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 86 NKGFKPDIVTYNVLAAGVCRND-EARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
N+ P I+TYN + R + + F EM +G++P+ T+ ++ C++ +
Sbjct: 204 NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGL 262
Query: 145 G-EAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
G EAE F + D + YS +V + K+ +
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFG------------------------KLRRL 298
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
EK +L E+++ G + S LL G I +AM + M++ P+ YS++
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
L+ G+ R LF PD TY +I + KE + LF DM I
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
+PD+ TY +++ K D I + M +I Y+ +I + YE+A+
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDA-RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEAL 477
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
F M + G P T+ ++ + + GL+KE+ +L + G+
Sbjct: 478 VAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 167/382 (43%), Gaps = 23/382 (6%)
Query: 56 LDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGF-KPDIVTYNVLAAGVCRNDEARVAIN 114
L + + + K + +G+ + +F M+ + + KP+ Y ++ + + R +
Sbjct: 103 LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASN 174
FDEM S GV + ++ +I + G+ G E L E S + Y N
Sbjct: 163 VFDEMPSQGVSRSVFSYTALIN---AYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN 219
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
G D E LF E+ ++G I + + L C + +
Sbjct: 220 ACARGGLD----------------WEGLLGLFAEMRHEG-IQPDIVTYNTLLSACAIRGL 262
Query: 235 G-KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
G +A + TM + P YS +++ + + + L G PD+ +Y
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
++ +Y + S+KEA+ +F M+ G P+ TY+VLL F + D + ++ +MK +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL-NLFGQSGRYDDVRQLFLEMKSS 381
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
D Y++LI + +++ + LF DM+++ +EPD TY +I K GL ++A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 414 SELLDEMSSKGMTPSSHIISAV 435
++L M++ + PSS + V
Sbjct: 442 RKILQYMTANDIVPSSKAYTGV 463
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 164/428 (38%), Gaps = 57/428 (13%)
Query: 2 GMDSD-VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
G+D + ++ F E + G+ D V YN + A G D+A + + I D+
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y+ L++ + L + EM + G PDI +YNVL ++ + A+ F +M+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
+ G PN+ T+ +++ G+ + F ++ + + +A
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA---------------- 388
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
Y + +E+ +G KE + L
Sbjct: 389 ---------------------TYNILIEVFGEGGYFKE------------------VVTL 409
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
M N+EP Y ++ A G + AR + P YT +I ++ +
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+EAL F M G P + T+ LLY SF + I + + I +
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLY-SFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
++ I + +E+A++ + DM +PD+ T ++S+Y L+ E E +EM
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Query: 421 SSKGMTPS 428
+ + PS
Sbjct: 589 KASDILPS 596
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 11/230 (4%)
Query: 209 LSNKGDIAKEESCFK---LLTKLCLV-------GDIGKAMKLLETM-RSLNVEPSQIMYS 257
L +G IA+ FK L LV GD ++++L + M R + +P++ +Y+
Sbjct: 86 LPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYT 145
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
I++ L G +FD +G + V +YT +IN+Y R + +L+L MK
Sbjct: 146 IMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE 205
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
I P ++TY ++ + + + ++ +M+ I D+V Y+ L++ ++
Sbjct: 206 KISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE 265
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
A +F M D G+ PD TY+ ++ + K +++ +LL EM+S G P
Sbjct: 266 AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 149/380 (39%), Gaps = 56/380 (14%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V D E G D +YN++ +A K G + +A+ + +++ + Y+ L+
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
+ G D +F EMK+ PD TYN+L + + F +M + +EP
Sbjct: 361 LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ T++ II + GK G L + + +I M +D P+
Sbjct: 421 DMETYEGII---FACGKGG--------LHEDARKILQYMT-------------ANDIVPS 456
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
KAY +E + + +E A+ TM
Sbjct: 457 -------------SKAYTGVIEAFGQAALYEE------------------ALVAFNTMHE 485
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ PS + +L + G K + ++ V G + T+ I +Y + +E
Sbjct: 486 VGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEE 545
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A+ + DM++ PD T +L + A +D + +MK ++I ++CY +++
Sbjct: 546 AVKTYVDMEKSRCDPDERTLEAVL-SVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604
Query: 367 NGLMKTDNYEDAIRLFEDMI 386
KT+ ++D L E+M+
Sbjct: 605 AVYGKTERWDDVNELLEEML 624
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/444 (15%), Positives = 165/444 (37%), Gaps = 36/444 (8%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + + +G + Y+++ + + G+ DD ++ E++ N D D Y LI+ +
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGE 399
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + +F++M + +PD+ TY + + A M ++ + P+S
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKA 459
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
+ +IE EA FN + + S+E + +++
Sbjct: 460 YTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLL-------------------- 499
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+ + LV+++ + L + G ++ + G +A+K M
Sbjct: 500 ----YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+P + VL R F+ P ++ Y M+ Y + +
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDD 615
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
+L ++M + ++ G + + + ++ + + L + Y+ L+
Sbjct: 616 VNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALL 675
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPD-----KVTYTDMISLYYKKGLMKEASELLDEMS 421
+ L E A R+ + +GL P+ K+ ++ + + G+ S L++++
Sbjct: 676 DALWWLGQKERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDIN 735
Query: 422 S---KGMTPSSHIISAVNRSILKA 442
KG P ++ +V + K+
Sbjct: 736 DMLLKGDLPQLAVVVSVRGQLEKS 759
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/437 (23%), Positives = 189/437 (43%), Gaps = 42/437 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGV-------AYNIVFDALCKLGKVDDAIEMREELRVKNI 54
G+ +++ + K K+ G+ DG N + LC GK+ DA ++ E + N
Sbjct: 76 GVGTNLRARVKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQ 135
Query: 55 DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAIN 114
+ L++G L A + M G PD +TYN++ +C+ R A+
Sbjct: 136 VPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALV 195
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHF-NRLQDKSVEI---YSAMVNGYC 170
++M G P+ T+ +I + G +A + ++LQ+ Y+ +V C
Sbjct: 196 LLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVC 255
Query: 171 EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG---DIAKEESCFKLLTK 227
YC +A E+ +++ +G DI S L+
Sbjct: 256 R---------------------YCGS---ARAIEVLEDMAVEGCYPDIVTYNS---LVNY 288
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
C G++ + +++ + S +E + + Y+ +L +LC + + + P
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
V+TY +IN C+ L A+D F M + PD++TY +L K D I +
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+K T ++ Y+ +I+GL K + A+ L+ M+D G+ PD +T +I + +
Sbjct: 409 L-LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRA 467
Query: 408 GLMKEASELLDEMSSKG 424
L++EA ++L E S++G
Sbjct: 468 NLVEEAGQVLKETSNRG 484
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 172/415 (41%), Gaps = 57/415 (13%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
SG D + YN++ LCK G + A+ + E++ + D+ Y T+I+ GN
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A + + G P ++TY VL VCR + AI ++M +G P+ T+ ++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNN-------NNNYGDDKSP 185
C G + E + + +E+ Y+ +++ C N Y P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 186 TPISE----VGYCKVDLVEKAYELF---LELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
T I+ G CK L+ +A + F LE DI + ++K +V D A+
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD---AI 404
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+LL +++ P I Y+ V+D L G K A L+ + G PD +T ++I +
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
CR N ++EA + ++ RG + GS
Sbjct: 465 CRANLVEEAGQVLKETSNRGNG---------IRGST------------------------ 491
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
Y ++I GL K E AI + E M+ G +PD+ YT ++ + G+ EA
Sbjct: 492 ---YRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 209 LSNKGDIAK--EESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
LS+ G I + EE+ ++L LC G + A KL+E M N P S ++ L +
Sbjct: 93 LSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARI 152
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
+ A + V G PD +TY +I + C+ ++ AL L +DM G PDVITY
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
++ F A I W+D Q ++ Y+VL+ + + AI + EDM
Sbjct: 213 NTVIRCMFDYGNAEQAIR-FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMA 271
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+G PD VTY +++ ++G ++E + ++ + S G+
Sbjct: 272 VEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL 310
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G+ +A++ + P I Y+++++ +C + A + + G PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+++N CR +L+E + Q + G++ + +TY LL+ S + D + I M
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH-SLCSHEYWDEVEEILNIMY 341
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
QT V+ Y++LINGL K AI F M+++ PD VTY ++ K+G++
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 412 EASELLDEMSSKGMTP 427
+A ELL + + P
Sbjct: 402 DAIELLGLLKNTCCPP 417
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 5/250 (2%)
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A +L ++ + SC L+ L + + KAM +L M P I Y++++
Sbjct: 123 ACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIG 182
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
LC G + A L + G PDV+TY T+I + ++A+ ++D + G P
Sbjct: 183 NLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPP 242
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ITYTVL+ + + I + DM D+V Y+ L+N + N E+ +
Sbjct: 243 FMITYTVLVELVCRYCGSARAIE-VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASV 301
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS----SHIISAVNR 437
+ ++ GLE + VTY ++ E E+L+ M P+ + +I+ + +
Sbjct: 302 IQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCK 361
Query: 438 SILKARKVQF 447
+ L +R + F
Sbjct: 362 ARLLSRAIDF 371
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 127/289 (43%), Gaps = 33/289 (11%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++ ++ G + D V YN + + C+ G +++ + + + ++L+ Y TL+
Sbjct: 264 IEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHS 323
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C + + N M + P ++TYN+L G+C+ AI+ F +M P+
Sbjct: 324 LCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD 383
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQD------------------------KSVEIYS 163
T+ ++ + G V +A L++ K++E+Y
Sbjct: 384 IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYH 443
Query: 164 AMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK 223
M++ + DD + + G+C+ +LVE+A ++ E SN+G+ + +
Sbjct: 444 QMLDA--------GIFPDDITRRSLI-YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRL 494
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
++ LC +I A++++E M + +P + +Y+ ++ + +G A
Sbjct: 495 VIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S +D F + E D V YN V A+ K G VDDAIE+ L+ + Y ++
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G +G + A ++++M + G PD +T L G CR + A E + G
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN 485
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEA 172
+T++++I+GLC ++ + ++E+ M+ G C+
Sbjct: 486 GIRGSTYRLVIQGLCKKKEI-----------EMAIEVVEIMLTGGCKP 522
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/490 (22%), Positives = 207/490 (42%), Gaps = 98/490 (20%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A N L + ++D ++ +E+ ++ + +I +C + L +A +F M
Sbjct: 185 ALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRM 244
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM---ESDGVEPNSTTHKMIIEGLCSV 141
G P++V++N++ G C+ + R A+ +M + V PN+ T+ +I G C
Sbjct: 245 LKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKA 304
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
G++ AE + V+ Y A+V+ Y A ++
Sbjct: 305 GRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSS---------------------- 342
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
++A L E+++KG + ++ L + GDI AM +L M S N++ + +
Sbjct: 343 --DEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQA 400
Query: 258 IVLDALCHVGKTKHA-------------------RSLFDSFVG----------------R 282
IV+ LC G K A +L FV +
Sbjct: 401 IVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQ 460
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDM-------------------KRRGIK--- 320
G + D +++ T+I+ Y + L+ AL+++ M +RG+
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 321 ---------PDVITYTVLLYGSFKNAAALDVINTIWRDMKQ-TEISLDVVCYSVLINGLM 370
D++TY LL S K + + + + KQ E S+ +V ++++IN L
Sbjct: 521 EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLC 580
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
K +YE A + + M+++G+ PD +TY +I+ + K ++ EL D + +G+TP H
Sbjct: 581 KFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEH 640
Query: 431 IISAVNRSIL 440
I ++ R +L
Sbjct: 641 IYLSIVRPLL 650
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 175/394 (44%), Gaps = 39/394 (9%)
Query: 17 SGMFL--DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
SG F+ + V YN V + CK G++D A +R ++ +D + + Y L+ Y G+
Sbjct: 283 SGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSS 342
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A + +EM +KG + V YN + + + A++ +M S ++ + T ++
Sbjct: 343 DEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIV 402
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
+ GLC G V EA ++ +K + + + C + ++ D K +G
Sbjct: 403 VRGLCRNGYVKEAVEFQRQISEKKL-----VEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
V +G S L+ G + +A+++ + M +N + +
Sbjct: 458 LV---------------QGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
+Y+ +++ L G A ++ ++ D+VTY T++N + +++EA D+ M
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 315 KRRGIKPDV--ITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+++ + V +T+ +++ +GS++ A + + M + + D + Y LI
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKA------KEVLKFMVERGVVPDSITYGTLIT 612
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
K + E + L + +I +G+ P + Y ++
Sbjct: 613 SFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
+ AYE+ + +G + + L V +I + K+ + M SL + +++V
Sbjct: 165 QGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLV 224
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG- 318
+ + C K A S+F + G P+VV++ MI+ C+ ++ AL L M
Sbjct: 225 IYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSG 284
Query: 319 --IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
+ P+ +TY ++ G F A LD+ I DM ++ + + Y L++ + + +
Sbjct: 285 NFVSPNAVTYNSVING-FCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD 343
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
+A+RL ++M KGL + V Y ++ + +G ++ A +L +M+SK M + V
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 437 RSILK 441
R + +
Sbjct: 404 RGLCR 408
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/365 (18%), Positives = 154/365 (42%), Gaps = 28/365 (7%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ +L++ G+ A+ + + + +GF + N + +E + EM+
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNN 176
S G N T ++I C K+ EA + F R+ +V ++ M++G C+
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT---- 266
Query: 177 NNYGDDK-SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
GD + + + ++G + V + + N C G +
Sbjct: 267 ---GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVING---------------FCKAGRLD 308
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A ++ M V+ ++ Y ++DA G + A L D +G + V Y +++
Sbjct: 309 LAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV 368
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++ A+ + +DM + ++ D T +++ G +N + + R + + ++
Sbjct: 369 YWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVE-FQRQISEKKL 427
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
D+VC++ L++ ++ A ++ M+ +GL D +++ +I Y K+G ++ A E
Sbjct: 428 VEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALE 487
Query: 416 LLDEM 420
+ D M
Sbjct: 488 IYDGM 492
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 113/288 (39%), Gaps = 28/288 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ M +D IV LC+ G V +A+E + ++ K + DI + TL+ +
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
L A + M +G D +++ L G + + A+ +D M N
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+ I+ GL G G AEA N ++ K + Y+ ++N + N
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGN---------------- 547
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFK---LLTKLCLVGDIGKAMKLLETMRSL 247
VE+A ++ ++ K D K S ++ LC G KA ++L+ M
Sbjct: 548 --------VEEADDILSKM-QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVER 598
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
V P I Y ++ + + L D + +G TP Y +++
Sbjct: 599 GVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 170/405 (41%), Gaps = 56/405 (13%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G D V V + LC G+V +A+E+ E + K +D+ TL+KGYC G + A
Sbjct: 278 GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVA 337
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F EM+ KG+ P++ TYN+L AG C A++ F++M++D + N T +I G
Sbjct: 338 QRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRG 397
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
L G+ + +QD S ++ A ++ Y N Y G+ K +
Sbjct: 398 LSIGGRTDDGLKILEMMQD-SDTVHGARIDPY-----NCVIY------------GFYKEN 439
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
E A E L K E F P + S
Sbjct: 440 RWEDALEFLL---------KMEKLF----------------------------PRAVDRS 462
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
L +LC G ++ +D +G G P ++ +I+ Y + ++E+L+L DM R
Sbjct: 463 FKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTR 522
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G P T+ ++ G K ++ I + DM + D Y+ L+ L + +
Sbjct: 523 GYLPRSSTFNAVIIGFCKQDKVMNGIKFV-EDMAERGCVPDTESYNPLLEELCVKGDIQK 581
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
A LF M++K + PD ++ ++ +K + S L D + S
Sbjct: 582 AWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSLQDIIQS 626
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 170/403 (42%), Gaps = 62/403 (15%)
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+ +M G D+ TY +L G+ + M++ GV PN+ + ++ L
Sbjct: 168 FFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHAL 227
Query: 139 CSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
C GKVG A + + +++ + ++ +++ YC + + L
Sbjct: 228 CKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQS-----------------MVL 270
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
+EK + L G + + K++ LC G + +A+++LE + S + + +
Sbjct: 271 LEKCFSL-------GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++ C +GK + A+ F +G+ P+V TY +I YC + L ALD F DMK
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ---TEISLDVVCYSVLINGLMKTDNY 375
I+ + T+ L+ G D + + +M Q T + Y+ +I G K + +
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKIL--EMMQDSDTVHGARIDPYNCVIYGFYKENRW 441
Query: 376 EDAI-------RLFEDMIDK-----------GLEPDKVTYTDMIS--------------- 402
EDA+ +LF +D+ G++ K Y MI
Sbjct: 442 EDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
Y + G ++E+ EL+++M ++G P S +AV K KV
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKV 544
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 128/311 (41%), Gaps = 19/311 (6%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ ++ + + G +D VA N + C LGK+ A E+ K +++ Y
Sbjct: 297 GRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME- 120
LI GYC G L A FN+MK + + T+N L G+ + + M+
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 121 SDGVEPNST-THKMIIEGLCSVGKVGEA-------EAHFNRLQDKSVEIYSAMVNGYCE- 171
SD V + +I G + +A E F R D+S ++ S G +
Sbjct: 417 SDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDD 476
Query: 172 -ASNNNNNYGDDKSPTPISEVGYCKVDL------VEKAYELFLELSNKGDIAKEESCFKL 224
+ + G+ P+ I V +C + +E++ EL ++ +G + + + +
Sbjct: 477 LKTAYDQMIGEGGVPSII--VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAV 534
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+ C + +K +E M P Y+ +L+ LC G + A LF V +
Sbjct: 535 IIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 285 TPDVVTYTTMI 295
PD +++++
Sbjct: 595 VPDPSMWSSLM 605
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 8/211 (3%)
Query: 230 LVGDIGKAMKLLETMRSLNVEP----SQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GF 284
L+ D A LET R + P S+ Y + LC + L D G
Sbjct: 49 LILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGL 108
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
PD + T+I + R +K + + + + GIKP + + +L K +D+
Sbjct: 109 PPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKE--DIDIAR 166
Query: 345 TIW-RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ R M + I DV Y +L+ GL T+ D +L + M G+ P+ V Y ++
Sbjct: 167 EFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHA 226
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
K G + A L+ EM + +ISA
Sbjct: 227 LCKNGKVGRARSLMSEMKEPNDVTFNILISA 257
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 112/272 (41%), Gaps = 23/272 (8%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + G + YN++ C +G +D A++ +++ I + + TLI+G +
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 71 QGNLIDAFYMFNEMKNK----GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G D + M++ G + D YN + G + + A+ +ME + P
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFP 456
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASN-------- 174
+ + LC G + + + ++++ + S+ + +++ Y +
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 175 ---NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
Y S +G+CK D V + +++ +G + ES LL +LC+
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVK 576
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
GDI KA L M ++ P M+S ++ L
Sbjct: 577 GDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCL 608
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 178/381 (46%), Gaps = 23/381 (6%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D++ T L+ G +G +A +FN + +G KP ++TY L + R ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
++E +G++P++ II G + D++++I+ M C+ + +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNL-----------DQAMKIFEKMKESGCKPTAST 426
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELF-LELSNKGDIAKEESCFKLLTKLCLVGDIG 235
N T I GY K+ +E++ L + L ++ + +C L+ C I
Sbjct: 427 FN-------TLIK--GYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIE 477
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL-FDSFVGRGFTPDVVTYTTM 294
+A ++ M+S V+P + ++ + A +G T A + + P+V T T+
Sbjct: 478 EAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTI 537
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
+N YC ++EAL F MK G+ P++ + L+ G F N +D + + M++
Sbjct: 538 VNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNINDMDGVGEVVDLMEEFG 596
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
+ DVV +S L+N + + ++ DM++ G++PD ++ + Y + G ++A
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 415 ELLDEMSSKGMTPSSHIISAV 435
++L++M G+ P+ I + +
Sbjct: 657 QILNQMRKFGVRPNVVIYTQI 677
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 180/394 (45%), Gaps = 21/394 (5%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
YTTL+ Q + + ++++ G KPD + +N + + A+ F++M+
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMK 416
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNR-LQDKSVE----IYSAMVNGYC----- 170
G +P ++T +I+G +GK+ E+ + L+D+ ++ + +V +C
Sbjct: 417 ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKI 476
Query: 171 -EASN---NNNNYGDDKSPTPISEVG--YCKVDLVEKAYELFLE--LSNKGDIAKEESCF 222
EA N +YG + + Y ++ A ++ + L NK +C
Sbjct: 477 EEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVK-PNVRTCG 535
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
++ C G + +A++ M+ L V P+ +++ ++ ++ + D
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PDVVT++T++N++ + +K +++ DM GI PD+ +++L G + A +
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG-YARAGEPEK 654
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID-KGLEPDKVTYTDMI 401
I M++ + +VV Y+ +I+G + A+++++ M GL P+ TY +I
Sbjct: 655 AEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLI 714
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ + +A ELL +M K + P+ + +
Sbjct: 715 WGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 162/341 (47%), Gaps = 20/341 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREE-LRVKNIDLDIKHYTTLIKGYC 69
F++ KESG +N + K+GK++++ + + LR + + + + L++ +C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-DEMESDGVEPNS 128
Q + +A+ + +M++ G KPD+VT+N LA R A + M + V+PN
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN------- 177
T I+ G C GK+ EA F R+++ V ++++++ G+ ++ +
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 178 --NYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVG 232
+G S + + V +++ E++ ++ +G I + F +L K G
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML-EGGIDPDIHAFSILAKGYARAG 650
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTY 291
+ KA ++L MR V P+ ++Y+ ++ C G+ K A ++ G G +P++ TY
Sbjct: 651 EPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
T+I + +A +L +DM+ + + P T ++ G
Sbjct: 711 ETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
E G+ D A++I+ + G+ + A ++ ++R + ++ YT +I G+C G +
Sbjct: 629 EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Query: 76 DAFYMFNEMKN-KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A ++ +M G P++ TY L G + A +ME V P T ++I
Sbjct: 689 KAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
Query: 135 IEGLCSVG 142
+G S+G
Sbjct: 749 ADGWKSIG 756
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 191/406 (47%), Gaps = 31/406 (7%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YN + D K+ + D A + + ++ +N+++ I+ +T LI+ Y G +A + FN M
Sbjct: 153 PYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
++ G PD + ++++ + + R A A + FD ++ D EP+ + ++ G C G++
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEI 271
Query: 145 GEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
EAE F ++ + +V YS +++ C +
Sbjct: 272 SEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQ------------------------IS 307
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
+A+++F ++ + G + L+ G K +++ M+ L EP I Y+ ++
Sbjct: 308 RAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLI 367
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
+A C ++A + ++ + + + T+ T+ + + A ++ M +
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE 427
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
P+ +TY +L+ F + + D++ + ++M E+ +V Y +L+ ++ +A +
Sbjct: 428 PNTVTYNILM-RMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 381 LFEDMI-DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
LF++M+ +K L P Y +++ + G +K+ EL+++M KG+
Sbjct: 487 LFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 181 DDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
D KSP P +E+ KV + A+ L + ++ E+ L+ + G +A+
Sbjct: 147 DHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAV 206
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
M P +I +SIV+ L + A+S FDS R F PDV+ YT ++ +
Sbjct: 207 HCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGW 265
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
CR + EA +F++MK GI+P+V TY++++ + + + ++ DM + + +
Sbjct: 266 CRAGEISEAEKVFKEMKLAGIEPNVYTYSIVI-DALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
+ ++ L+ +K E ++++ M G EPD +TY +I + + ++ A ++L+
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLN 384
Query: 419 EMSSKGMTPSSHIISAVNRSILKARKV 445
M K ++ + + R I K R V
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDV 411
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 161/378 (42%), Gaps = 64/378 (16%)
Query: 111 VAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYC 170
+A + D M+S VE + T ++I G EA FNR++D
Sbjct: 169 LAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED-------------- 214
Query: 171 EASNNNNNYG--DDKSPTPISEVGYCKVDLVEKAYELFLELSNK--GDIAKEESCFKLLT 226
YG DK I + +A F L ++ D+ + L+
Sbjct: 215 --------YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTN---LVR 263
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
C G+I +A K+ + M+ +EP+ YSIV+DALC G+ A +F + G P
Sbjct: 264 GWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAP 323
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG-----SFKNAAAL- 340
+ +T+ ++ + + ++ L ++ MK+ G +PD ITY L+ + +NA +
Sbjct: 324 NAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVL 383
Query: 341 ------------DVINTIWR----------------DMKQTEISLDVVCYSVLINGLMKT 372
NTI+R M + + + V Y++L+ + +
Sbjct: 384 NTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGS 443
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM-SSKGMTPSSHI 431
+ + +++ ++M DK +EP+ TY +++++ G A +L EM K +TPS +
Sbjct: 444 KSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSL 503
Query: 432 ISAVNRSILKARKVQFHE 449
V + +A +++ HE
Sbjct: 504 YEMVLAQLRRAGQLKKHE 521
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ FKE K +G+ + Y+IV DALC+ G++ A ++ ++ + +
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
L++ + G ++N+MK G +PD +TYN L CR++ A+ + M
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
E N++T I + V A +YS M+ CE
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAH-----------RMYSKMMEAKCE---------- 427
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGD---IAKEESCFKLL-TKLCLVGDIGKA 237
P ++ ++ + K+ ++ L++ + D + + ++LL T C +G A
Sbjct: 428 ---PNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 238 MKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
KL + M + PS +Y +VL L G+ K L + + +G
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 178/385 (46%), Gaps = 37/385 (9%)
Query: 11 FKEFKES-GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYC 69
FK KES G+ + N++ ALCK ++ A ++ +E+ + ++ YTT++ GY
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+G++ A + EM ++G+ PD TY VL G C+ A D+ME + +EPN
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
T+ ++I LC K GEA F+ + ++S S++ +A
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA----------------- 340
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
C+ V++A L+ ++ + L+ LC G + +A KL + ++
Sbjct: 341 ---LCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI 397
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
PS + Y+ ++ +C G+ A L+D R P+ TY +I + ++KE +
Sbjct: 398 -PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+ ++M G P+ T+ +L G K + + E ++ +V +V+ NG
Sbjct: 457 VLEEMLEIGCFPNKTTFLILFEGLQK--------------LGKEEDAMKIVSMAVM-NGK 501
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDK 394
+ +++E ++ F +DKG+ P K
Sbjct: 502 VDKESWELFLKKFAGELDKGVLPLK 526
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 173/378 (45%), Gaps = 29/378 (7%)
Query: 45 MREELRVKN--IDLDIKHYTTLIKGYCLQGNLIDAFY-MF-NEMKNKGFKPDIVTYNVLA 100
MR LR+ + + ++ TL+ +Q D + MF N ++ G P+I T N+L
Sbjct: 140 MRIFLRIPDFGVKRSVRSLNTLL-NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLV 198
Query: 101 AGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE 160
+C+ ++ A DE+ S G+ PN T+ I+ G + G + A+ + D+
Sbjct: 199 KALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR--- 255
Query: 161 IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEES 220
G+ Y D + T + + GYCK+ +A + ++ K +I E
Sbjct: 256 -------GW---------YPDATTYTVLMD-GYCKLGRFSEAATVMDDME-KNEIEPNEV 297
Query: 221 CFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+ ++ + LC G+A + + M + P + V+DALC K A L+
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
+ PD +T+I+ C+ + EA LF + ++ I P ++TY L+ G +
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGE- 415
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
L +W DM + + + Y+VLI GL K N ++ +R+ E+M++ G P+K T+
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 400 MISLYYKKGLMKEASELL 417
+ K G ++A +++
Sbjct: 476 LFEGLQKLGKEEDAMKIV 493
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 165/373 (44%), Gaps = 31/373 (8%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-DEM 119
+ L++ Y L G + +F + + G K + + N L + +N + F +
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNN 175
ES G+ PN T ++++ LC + A + + ++ Y+ ++ GY
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR--- 239
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
GD +E A + E+ ++G + L+ C +G
Sbjct: 240 ----GD-----------------MESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+A +++ M +EP+++ Y +++ ALC K+ AR++FD + R F PD +I
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++ C + + EA L++ M + PD + L++ K + ++ + ++ I
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA-RKLFDEFEKGSI 397
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
++ Y+ LI G+ + +A RL++DM ++ +P+ TY +I K G +KE
Sbjct: 398 P-SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 416 LLDEMSSKGMTPS 428
+L+EM G P+
Sbjct: 457 VLEEMLEIGCFPN 469
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 35/244 (14%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C L+ LC DI A K+L+ + S+ + P+ + Y+ +L G + A+ + +
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 252
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG------- 332
+ RG+ PD TYT +++ YC++ EA + DM++ I+P+ +TY V++
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 333 -------------SFKNAAAL--------------DVINTIWRDMKQTEISLDVVCYSVL 365
SF ++L D +WR M + D S L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+ L K +A +LF D +KG P +TY +I+ +KG + EA L D+M +
Sbjct: 373 IHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 426 TPSS 429
P++
Sbjct: 432 KPNA 435
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 11/205 (5%)
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
S + P+ ++++ ALC + A + D G P++VTYTT++ Y ++
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 306 EALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDVV 360
A + ++M RG PD TYTVL+ G F AA T+ DM++ EI + V
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAA------TVMDDMEKNEIEPNEV 297
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y V+I L K +A +F++M+++ PD +I + + EA L +M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 421 SSKGMTPSSHIISAVNRSILKARKV 445
P + ++S + + K +V
Sbjct: 358 LKNNCMPDNALLSTLIHWLCKEGRV 382
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF-DSFVGR 282
LL L G +M++ + V+ S + +L+ L + ++F +S
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G TP++ T ++ + C+ N ++ A + ++ G+ P+++TYT +L G + ++
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTIL-GGYVARGDMES 244
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ +M D Y+VL++G K + +A + +DM +EP++VTY MI
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
K+ EA + DEM + P S + V ++ + KV
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKV 347
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 56/434 (12%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
+N + D K G+++DA + E+ + +D + T+I G+L +A + +M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
KG PD TYN+L + + A+ + ++ G+ P++ TH+ ++ LC V
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
E EA + S+ I D+ P+ Y LV +A L
Sbjct: 428 EVEAVIAEMDRNSIRI--------------------DEHSVPVIMQMYVNEGLVVQAKAL 467
Query: 206 FLEL------------------SNKGDIAKEESCF-----------KLLTKLCLVGDIG- 235
F + KG + E+ F +L ++ G
Sbjct: 468 FERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Query: 236 -----KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
KA+ L + M++ P + Y+ + L V A+ + + G P T
Sbjct: 528 AKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKT 587
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y MI SY R+ L +A+DL++ M++ G+KP+ + Y L+ G F + ++ +R M
Sbjct: 588 YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING-FAESGMVEEAIQYFRMM 646
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
++ + + + + LI K E+A R+++ M D PD M+SL G++
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 411 KEASELLDEMSSKG 424
EA + + + KG
Sbjct: 707 SEAESIFNALREKG 720
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 193/439 (43%), Gaps = 17/439 (3%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G +D + F E +SG+ +D V +N + G + +A + +++ K I D K Y
Sbjct: 319 GRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTY 378
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
L+ + G++ A + +++ G PD VT+ + +C+ EM+
Sbjct: 379 NILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDR 438
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV---EIYSAMVNGYCE------- 171
+ + + + +I++ + G V +A+A F R Q V +A+++ Y E
Sbjct: 439 NSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEA 498
Query: 172 -----ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
N + +D + Y K L EKA LF + N+G E + L
Sbjct: 499 ETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQ 558
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
L V + +A ++L M +P Y+ ++ + +G A L+++ G P
Sbjct: 559 MLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKP 618
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+ V Y ++IN + ++EA+ F+ M+ G++ + I T L+ ++ L+ +
Sbjct: 619 NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI-KAYSKVGCLEEARRV 677
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ MK +E DV + +++ +A +F + +KG D +++ M+ LY
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKG 736
Query: 407 KGLMKEASELLDEMSSKGM 425
G++ EA E+ +EM G+
Sbjct: 737 MGMLDEAIEVAEEMRESGL 755
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/451 (22%), Positives = 179/451 (39%), Gaps = 57/451 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK K G + D YN +F L + VD+A + E+ K Y +I Y
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L DA ++ M+ G KP+ V Y L G + AI F ME GV+ N
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+I+ VG + EA +++++D G A++N S
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSE--------GGPDVAASN-------------SM 696
Query: 191 VGYCK-VDLVEKAYELFLELSNKG--DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+ C + +V +A +F L KG D+ + L + G + +A+++ E MR
Sbjct: 697 LSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM---GMLDEAIEVAEEMRES 753
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLF-DSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ ++ V+ G+ LF + V R D T+ T
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKT------------- 800
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW-------------RDMKQT 353
LF +K+ G+ + ++ Y K A + T++ +++
Sbjct: 801 ---LFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSG 857
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
EI + Y+ +I + + + A++ + M +KGLEPD VT ++ +Y K G+++
Sbjct: 858 EIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGV 917
Query: 414 SELLDEMSSKGMTPSSHIISAVNRSILKARK 444
+ ++ + PS + AV + + A +
Sbjct: 918 KRVHSRLTFGELEPSQSLFKAVRDAYVSANR 948
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 178/374 (47%), Gaps = 30/374 (8%)
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
++ +GY D+ +F++MK+ P Y + A + ++ +A + M
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 123 GVEPNSTTHKMIIEGLC-SVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P + ++I+ LC + G V D ++I+ M C+ ++ YG
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTV-----------DAGLKIFLEMPKRGCDP--DSYTYG- 196
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
T IS G C+ +++A +LF E+ K + L+ LC ++ +AM+ L
Sbjct: 197 ----TLIS--GLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYL 250
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E M+S +EP+ YS ++D LC G++ A LF+ + RG P++VTYTT+I C+
Sbjct: 251 EEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKE 310
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYG-----SFKNAAA-LDVINTIWRDMKQTEI 355
++EA++L M +G+KPD Y ++ G F+ AA LD + +
Sbjct: 311 QKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTW 370
Query: 356 SLDVVCYSVLINGLMKTDNYED-AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
++ V + ++ GL NY A L+ M +G+ + T ++ KKG ++A
Sbjct: 371 NIHVKTSNEVVRGL--CANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Query: 415 ELLDEMSSKGMTPS 428
+L+DE+ + G PS
Sbjct: 429 QLVDEIVTDGCIPS 442
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 137/272 (50%), Gaps = 23/272 (8%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + G D Y + LC+ G++D+A ++ E+ K+ + YT+LI G C
Sbjct: 180 FLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG 239
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
N+ +A EMK+KG +P++ TY+ L G+C++ + A+ F+ M + G PN T
Sbjct: 240 SKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVT 299
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEAS--NNNNNYGDDK- 183
+ +I GLC K+ EA +R+ + ++ +Y +++G+C S N+ D+
Sbjct: 300 YTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 184 ----SPTPIS---------EV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL 228
+P ++ EV G C + +A+ L+L + ++G + E+ L+ L
Sbjct: 360 LGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCL 418
Query: 229 CLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
C G+ KA++L++ + + PS+ + +++
Sbjct: 419 CKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHV-GKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A K + MR + + P+ ++++ ALC G +F RG PD TY T+I
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ CR + EA LF +M + P V+TYT L+ G + +D +MK I
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING-LCGSKNVDEAMRYLEEMKSKGI 258
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+V YS L++GL K A+ LFE M+ +G P+ VTYT +I+ K+ ++EA E
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 416 LLDEMSSKGMTPSSHIISAV 435
LLD M+ +G+ P + + V
Sbjct: 319 LLDRMNLQGLKPDAGLYGKV 338
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
++++ M+ + +PSQ Y VL L + A + + G P V + +I
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIK 164
Query: 297 SYCRMNSLKEA-LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ CR + +A L +F +M +RG PD TY L+ G + +D ++ +M + +
Sbjct: 165 ALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR-FGRIDEAKKLFTEMVEKDC 223
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ VV Y+ LINGL + N ++A+R E+M KG+EP+ TY+ ++ K G +A E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
L + M ++G P+ + + + K +K+Q
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
P Y T++ N L A +++M+ G+ P V + VL+ +N +D
Sbjct: 119 PSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLK 178
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
I+ +M + D Y LI+GL + ++A +LF +M++K P VTYT +I+
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK-ARKVQFHE 449
+ EA L+EM SKG+ P+ S++ + K R +Q E
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ F+ G + V Y + LCK K+ +A+E+ + + ++ + D Y
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNV-------LAAGVCRNDEARVAIN 114
+I G+C +A +EM G P+ +T+N+ + G+C N +R A
Sbjct: 336 GKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFT 394
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA 147
+ M S G+ T + +++ LC G+ +A
Sbjct: 395 LYLSMRSRGISVEVETLESLVKCLCKKGEFQKA 427
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 176/383 (45%), Gaps = 18/383 (4%)
Query: 71 QGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
Q N++ + + F + N + P V+ N+L G + +A A +F +++ G +P T
Sbjct: 90 QNNVLFSLWFFRWLCSNYDYTPGPVSLNILF-GALLDGKAVKAAKSF--LDTTGFKPEPT 146
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY---CEASNNNNNYGDDKSPT 186
+ ++ L G V EA +N L+D + N C + + + +
Sbjct: 147 LLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM 206
Query: 187 PISEV----------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
SE C V + YEL + +G + KL++ C +G+
Sbjct: 207 VESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYAC 266
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
++L TM + N PS +Y ++ LC K A +F + +G+ PD V YTTMI
Sbjct: 267 MSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIR 326
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+C L A L+ +M ++G++P+ Y V+++G FK + ++ + +M +
Sbjct: 327 GFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKR-GEISLVEAFYNEMLRNGYG 385
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
++ + +I G ++A +F++M + G+ P+ +TY +I + K+ +++ +L
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 417 LDEMSSKGMTPSSHIISAVNRSI 439
E+ + G+ PS +A+ R++
Sbjct: 446 YKELKALGLKPSGMAYAALVRNL 468
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 109/283 (38%), Gaps = 28/283 (9%)
Query: 32 ALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKP 91
ALC G V + E+ ++ + +D Y LI G+C GN + + M P
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 92 DIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHF 151
+ Y + G+C N + A F ++ G P+ + +I G C G +G A +
Sbjct: 282 SMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLW 341
Query: 152 NRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFL 207
+ K + Y+ M++G+ + ++ LVE Y L
Sbjct: 342 FEMIKKGMRPNEFAYNVMIHGHFKRG---------------------EISLVEAFYNEML 380
Query: 208 ELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG 267
G + SC ++ C G +A ++ + M V P+ I Y+ ++ C
Sbjct: 381 RNGYGGTML---SCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKEN 437
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
K + L+ G P + Y ++ + +S+ +L+L
Sbjct: 438 KVEKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLNL 480
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
Y + LC K +A + + L+ K D YTT+I+G+C +G L A ++ EM
Sbjct: 286 YQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMI 345
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
KG +P+ YNV+ G + E + ++EM +G + +I+G CS GK
Sbjct: 346 KKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSD 405
Query: 146 EAEAHFNRLQDKSVE----IYSAMVNGYCE 171
EA F + + V Y+A++ G+C+
Sbjct: 406 EAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK K+ G D V Y + C+ G + A ++ E+ K + + Y +I G+
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 71 QG--NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
+G +L++AFY NEM G+ +++ N + G C + ++ A F M GV PN+
Sbjct: 366 RGEISLVEAFY--NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 129 TTHKMIIEGLCSVGKV 144
T+ +I+G C KV
Sbjct: 424 ITYNALIKGFCKENKV 439
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E + GM + AYN++ K G++ E+ + T+IKG+C G
Sbjct: 343 EMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHG 402
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+AF +F M G P+ +TYN L G C+ ++ + + E+++ G++P+ +
Sbjct: 403 KSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYA 462
Query: 133 MIIEGL 138
++ L
Sbjct: 463 ALVRNL 468
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 6/248 (2%)
Query: 185 PTP----ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
P+P I Y +KA +LFL + G S +L LC + KA +L
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+R + Y+++L+ C + +T A + V RG P++ TY TM+ + R
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
++ A + F +MK+R + DV+TYT +++G F A + ++ +M + + V
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHG-FGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
Y+ +I L K DN E+A+ +FE+M+ +G EP+ TY +I + G EL+ M
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRM 361
Query: 421 SSKGMTPS 428
++G P+
Sbjct: 362 ENEGCEPN 369
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 24/312 (7%)
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
M S + P+ T ++ E S GK DK+V+++ M C
Sbjct: 116 RMRSLRIGPSPKTFAIVAERYASAGK-----------PDKAVKLFLNMHEHGC------- 157
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGK 236
+ D S I +V CK VEKAYELF L +G + + + +L CL+ K
Sbjct: 158 -FQDLASFNTILDV-LCKSKRVEKAYELFRAL--RGRFSVDTVTYNVILNGWCLIKRTPK 213
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+++L+ M + P+ Y+ +L G+ +HA F R DVVTYTT+++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+ +K A ++F +M R G+ P V TY ++ K + + ++ +M +
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV-VMFEEMVRRGYE 332
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+V Y+VLI GL + L + M ++G EP+ TY MI Y + +++A L
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 417 LDEMSSKGMTPS 428
++M S P+
Sbjct: 393 FEKMGSGDCLPN 404
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 134/346 (38%), Gaps = 64/346 (18%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G V F E G F D ++N + D LCK +V+ A E+ LR + +D Y
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTY 198
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++ G+CL A + EM +G P++ TYN + G R + R A F EM+
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNN 177
E + T+ ++ G G++ A F+ + + SV Y+AM+ C+ N
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN--- 315
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
VE A +F E+ +G
Sbjct: 316 ---------------------VENAVVMFEEMVRRG------------------------ 330
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
EP+ Y++++ L H G+ L G P+ TY MI
Sbjct: 331 -----------YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRY 379
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
Y + +++AL LF+ M P++ TY +L+ G F + D++
Sbjct: 380 YSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMV 425
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 191/446 (42%), Gaps = 70/446 (15%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDL--DIKHYT 62
S + F+ K + + D +NI+ L KLG+ A+++ +R K + D+ +T
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+++ Y ++G + + +F M +G KP+IV+YN L + + A++ +++ +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G+ P+ ++ ++ N+YG
Sbjct: 253 GIIPDVVSYTCLL-----------------------------------------NSYGRS 271
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV------GDIGK 236
+ P KA E+FL + KE ++T L+ G + +
Sbjct: 272 RQPG--------------KAKEVFLMMR------KERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+++ M ++P+ + +L A K + ++ + RG + Y + I
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
SY L++A+ L+Q M+++ +K D +T+T+L+ GS + + + I+ + ++M+ I
Sbjct: 372 SYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL-KEMEDLSIP 430
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
L YS ++ K +A +F M G EPD + YT M+ Y +A EL
Sbjct: 431 LTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACEL 490
Query: 417 LDEMSSKGMTPSSHIISAVNRSILKA 442
EM + G+ P S SA+ R+ K
Sbjct: 491 FLEMEANGIEPDSIACSALMRAFNKG 516
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 191/454 (42%), Gaps = 53/454 (11%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN++ + VD A + E++ + D + Y LI + G A + ++M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
P TYN L + R A+ +M +GV P+ TH +++ S +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 146 EAEAHFNRLQDKSVEIYSAMVN--GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+A ++F ++ V + N YC + ++ D + + C+ D+V
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 204 ELFLELSNKGDIAKEESCFK----------------LLTKLCLVGDIGKAMKLLETMRSL 247
+ L S KG+I + F+ L+ + G G A+ +L ++
Sbjct: 194 IMHL-YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+ P + Y+ +L++ + A+ +F P+VVTY +I++Y L EA
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 308 LDLFQDMKRRGIKPDVITYTVLL----------------------------------YGS 333
+++F+ M++ GIKP+V++ LL GS
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 334 FKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
+ NAA L+ +++ M++ ++ D V +++LI+G + Y +AI ++M D +
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
K Y+ ++ Y K+G + EA + ++M G P
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 466
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 188/460 (40%), Gaps = 89/460 (19%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E ++ D Y+ + +A + G+ A+ + +++ I Y LI
Sbjct: 34 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 93
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GN +A + +M + G PD+VT+N++ + + A++ F+ M+ V P++TT
Sbjct: 94 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 153
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+II L +G+ +A FN +++K E
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAE------------------------------ 183
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
C+ D+V + L S KG+I E+C + E M + ++
Sbjct: 184 ---CRPDVVTFTSIMHL-YSVKGEI---ENC----------------RAVFEAMVAEGLK 220
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS------- 303
P+ + Y+ ++ A G + A S+ G PDVV+YT ++NSY R
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 304 ----------------------------LKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
L EA+++F+ M++ GIKP+V++ LL +
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
+ ++V +T+ + I+L+ Y+ I + E AI L++ M K ++ D V
Sbjct: 341 SKKKVNV-DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
T+T +IS + EA L EM + + + S+V
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 192/467 (41%), Gaps = 60/467 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ G+ + V+YN + A G A+ + +++ I D+ YT L+ Y
Sbjct: 211 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
A +F M+ + KP++VTYN L N A+ F +ME DG++PN +
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
++ K + + Q + + + +A N S
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN---------------------SA 369
Query: 191 VG-YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
+G Y +EKA L+ + K A + L++ C + +A+ L+ M L++
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
++ +YS VL A G+ A S+F+ G PDV+ YT+M+++Y +A +
Sbjct: 430 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 489
Query: 310 LFQDMKRRGIKPDVITYTVLLYG----------------------SFKNAAALDVI---N 344
LF +M+ GI+PD I + L+ F A ++ N
Sbjct: 490 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 549
Query: 345 TI--WRD-------MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
T+ W+ M SL + + +++ K+ E ++LF +I G+ +
Sbjct: 550 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 609
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH----IISAVNRS 438
TY ++ G ++ E+L+ MS G+ PS+ IIS RS
Sbjct: 610 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERS 656
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 178/431 (41%), Gaps = 44/431 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIE----MREELRVKNIDLD 57
GM + + K++G+ D V+Y + ++ + + A E MR+E R N+
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV--- 293
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINN-F 116
Y LI Y G L +A +F +M+ G KP++V+ L A C + +V ++
Sbjct: 294 -VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVL 351
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEA 172
+S G+ N+ + I + ++ +A A + ++ K V+ ++ +++G C
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 173 SNNNNNYGDDKSPTPIS---EVGYCKVDLVEKAYELFL-ELSNKGDIAKEESCFKLLTKL 228
S K P IS E+ + L ++ Y L S +G + + ES F +
Sbjct: 412 S---------KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 462
Query: 229 CLVGDI----------------GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
D+ GKA +L M + +EP I S ++ A G+ +
Sbjct: 463 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 522
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
L D + + + ++ + K A+DL Q M + I T +
Sbjct: 523 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY-LPSLSIGLTNQMLH 581
Query: 333 SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEP 392
F + ++ + ++ + + + +++ Y++L+ L+ N+ I + E M G++P
Sbjct: 582 LFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQP 641
Query: 393 DKVTYTDMISL 403
Y D+IS
Sbjct: 642 SNQMYRDIISF 652
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 206/501 (41%), Gaps = 87/501 (17%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E ++ D Y+ + +A + G+ A+ + +++ I Y LI
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GN +A + +M + G PD+VT+N++ + + A++ F+ M+ V P++TT
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 285
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+II L +G+ +A FN +++K E +V + T I
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV-----------------TFTSIMH 328
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
+ K + +E +F + +G S L+ + G G A+ +L ++ +
Sbjct: 329 LYSVKGE-IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P + Y+ +L++ + A+ +F P+VVTY +I++Y L EA+++
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 311 FQDMKRRGIKPDVITYTVLL----------------------------------YGSFKN 336
F+ M++ GIKP+V++ LL GS+ N
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 337 AAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID--------- 387
AA L+ +++ M++ ++ D V +++LI+G + Y +AI ++M D
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 388 --------------------------KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
G EPD + YT M+ Y +A EL EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 422 SKGMTPSSHIISAVNRSILKA 442
+ G+ P S SA+ R+ K
Sbjct: 628 ANGIEPDSIACSALMRAFNKG 648
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/454 (21%), Positives = 191/454 (42%), Gaps = 53/454 (11%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN++ + VD A + E++ + D + Y LI + G A + ++M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
P TYN L + R A+ +M +GV P+ TH +++ S +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 146 EAEAHFNRLQDKSVEIYSAMVN--GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+A ++F ++ V + N YC + ++ D + + C+ D+V
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 204 ELFLELSNKGDIAKEESCFK----------------LLTKLCLVGDIGKAMKLLETMRSL 247
+ L S KG+I + F+ L+ + G G A+ +L ++
Sbjct: 326 IMHL-YSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+ P + Y+ +L++ + A+ +F P+VVTY +I++Y L EA
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 308 LDLFQDMKRRGIKPDVITYTVLL----------------------------------YGS 333
+++F+ M++ GIKP+V++ LL GS
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 334 FKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
+ NAA L+ +++ M++ ++ D V +++LI+G + Y +AI ++M D +
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
K Y+ ++ Y K+G + EA + ++M G P
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 598
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 192/467 (41%), Gaps = 60/467 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+ G+ + V+YN + A G A+ + +++ I D+ YT L+ Y
Sbjct: 343 FEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
A +F M+ + KP++VTYN L N A+ F +ME DG++PN +
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
++ K + + Q + + + +A N S
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN---------------------SA 501
Query: 191 VG-YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
+G Y +EKA L+ + K A + L++ C + +A+ L+ M L++
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
++ +YS VL A G+ A S+F+ G PDV+ YT+M+++Y +A +
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACE 621
Query: 310 LFQDMKRRGIKPDVITYTVLLYG----------------------SFKNAAALDVI---N 344
LF +M+ GI+PD I + L+ F A ++ N
Sbjct: 622 LFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACN 681
Query: 345 TI--WRD-------MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
T+ W+ M SL + + +++ K+ E ++LF +I G+ +
Sbjct: 682 TLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLK 741
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH----IISAVNRS 438
TY ++ G ++ E+L+ MS G+ PS+ IIS RS
Sbjct: 742 TYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERS 788
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 179/432 (41%), Gaps = 46/432 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIE----MREELRVKNIDLD 57
GM + + K++G+ D V+Y + ++ + + A E MR+E R N+
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV--- 425
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINN-F 116
Y LI Y G L +A +F +M+ G KP++V+ L A C + +V ++
Sbjct: 426 -VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVDTVL 483
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEA 172
+S G+ N+ + I + ++ +A A + ++ K V+ ++ +++G C
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 173 SNNNNNYGDDKSPTPIS---EVGYCKVDLVEKAYELFL-ELSNKGDIAKEESCFKLLTKL 228
S K P IS E+ + L ++ Y L S +G + + ES F +
Sbjct: 544 S---------KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMA 594
Query: 229 CLVGDI----------------GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
D+ GKA +L M + +EP I S ++ A G+ +
Sbjct: 595 GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV 654
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV-ITYTVLLY 331
L D + + + ++ + K A+DL Q M P + I T +
Sbjct: 655 FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMD--PYLPSLSIGLTNQML 712
Query: 332 GSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
F + ++ + ++ + + + +++ Y++L+ L+ N+ I + E M G++
Sbjct: 713 HLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
Query: 392 PDKVTYTDMISL 403
P Y D+IS
Sbjct: 773 PSNQMYRDIISF 784
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 62/384 (16%)
Query: 48 ELRVKNIDLDIKHYTT--LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
E ++N+ L I Y ++K GN + FY + GFK D TY + + R
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGR 376
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
+ DEM DG +PN+ T+ +I + EA FN++Q+
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG------- 429
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCK-VDLVEKAYELFLELSNKGDIAKEESCFKL 224
C+ V YC +D+ KA FL++
Sbjct: 430 ----CKPD----------------RVTYCTLIDIHAKAG--FLDI--------------- 452
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
AM + + M++ + P YS++++ L G A LF V +G
Sbjct: 453 ------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
TP++VTY M++ + + + + AL L++DM+ G +PD +TY++++ + L+
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME-VLGHCGYLEEAE 559
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++ +M+Q D Y +L++ K N E A + ++ M+ GL P+ T ++S +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
+ + EA ELL M + G+ PS
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPS 643
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 29/270 (10%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
++ ++ F + +E+G D V Y + D K G +D A++M + ++ + D Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G+L A +F EM ++G P++VTYN++ + + A+ + +M++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
EP+ T+ +++E L G + EAEA F +Q K+ +Y +V+ + +A N
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN------ 589
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
VEKA++ + + + G +C LL+ V I +A +L
Sbjct: 590 ------------------VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
L+ M +L + PS Y+++L + C G++K
Sbjct: 632 LQNMLALGLRPSLQTYTLLL-SCCTDGRSK 660
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 28/320 (8%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
++ G DG Y + L + + ++ +E+ + Y LI Y L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A +FN+M+ G KPD VTY L + +A++ + M++ G+ P++ T+ +I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I L G + A F + D+ Y+ M++ + +A N N
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN------------- 522
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
A +L+ ++ N G + + ++ L G + +A + M+ N
Sbjct: 523 -----------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P + +Y +++D G + A + + + G P+V T ++++++ R+N + EA +L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 311 FQDMKRRGIKPDVITYTVLL 330
Q+M G++P + TYT+LL
Sbjct: 632 LQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +AM + M+ +P ++ Y ++D G A ++ G +PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWR 348
+IN + L A LF +M +G P+++TY +++ +++NA L +R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL------YR 528
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
DM+ D V YS+++ L E+A +F +M K PD+ Y ++ L+ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+++A + M G+ P+ +++ + L+ K+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 300 RMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
+MN AL F +KR+ G K D TYT ++ G+ A IN + +M + +
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
V Y+ LI+ + + +A+ +F M + G +PD+VTY +I ++ K G + A ++
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 419 EMSSKGMTPSSHIISAVNRSILKA 442
M + G++P + S + + KA
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKA 482
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 62/384 (16%)
Query: 48 ELRVKNIDLDIKHYTT--LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
E ++N+ L I Y ++K GN + FY + GFK D TY + + R
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGR 376
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
+ DEM DG +PN+ T+ +I + EA FN++Q+
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG------- 429
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCK-VDLVEKAYELFLELSNKGDIAKEESCFKL 224
C+ V YC +D+ KA FL++
Sbjct: 430 ----CKPD----------------RVTYCTLIDIHAKAG--FLDI--------------- 452
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
AM + + M++ + P YS++++ L G A LF V +G
Sbjct: 453 ------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
TP++VTY M++ + + + + AL L++DM+ G +PD +TY++++ + L+
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME-VLGHCGYLEEAE 559
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++ +M+Q D Y +L++ K N E A + ++ M+ GL P+ T ++S +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
+ + EA ELL M + G+ PS
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPS 643
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 29/270 (10%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
++ ++ F + +E+G D V Y + D K G +D A++M + ++ + D Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G+L A +F EM ++G P++VTYN++ + + A+ + +M++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
EP+ T+ +++E L G + EAEA F +Q K+ +Y +V+ + +A N
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN------ 589
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
VEKA++ + + + G +C LL+ V I +A +L
Sbjct: 590 ------------------VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
L+ M +L + PS Y+++L + C G++K
Sbjct: 632 LQNMLALGLRPSLQTYTLLL-SCCTDGRSK 660
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 28/320 (8%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
++ G DG Y + L + + ++ +E+ + Y LI Y L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A +FN+M+ G KPD VTY L + +A++ + M++ G+ P++ T+ +I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I L G + A F + D+ Y+ M++ + +A N N
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN------------- 522
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
A +L+ ++ N G + + ++ L G + +A + M+ N
Sbjct: 523 -----------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P + +Y +++D G + A + + + G P+V T ++++++ R+N + EA +L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 311 FQDMKRRGIKPDVITYTVLL 330
Q+M G++P + TYT+LL
Sbjct: 632 LQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +AM + M+ +P ++ Y ++D G A ++ G +PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWR 348
+IN + L A LF +M +G P+++TY +++ +++NA L +R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL------YR 528
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
DM+ D V YS+++ L E+A +F +M K PD+ Y ++ L+ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+++A + M G+ P+ +++ + L+ K+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 300 RMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
+MN AL F +KR+ G K D TYT ++ G+ A IN + +M + +
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
V Y+ LI+ + + +A+ +F M + G +PD+VTY +I ++ K G + A ++
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 419 EMSSKGMTPSSHIISAVNRSILKA 442
M + G++P + S + + KA
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKA 482
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 62/384 (16%)
Query: 48 ELRVKNIDLDIKHYTT--LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
E ++N+ L I Y ++K GN + FY + GFK D TY + + R
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGR 376
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
+ DEM DG +PN+ T+ +I + EA FN++Q+
Sbjct: 377 AKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG------- 429
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCK-VDLVEKAYELFLELSNKGDIAKEESCFKL 224
C+ V YC +D+ KA FL++
Sbjct: 430 ----CKPD----------------RVTYCTLIDIHAKAG--FLDI--------------- 452
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
AM + + M++ + P YS++++ L G A LF V +G
Sbjct: 453 ------------AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
TP++VTY M++ + + + + AL L++DM+ G +PD +TY++++ + L+
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME-VLGHCGYLEEAE 559
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++ +M+Q D Y +L++ K N E A + ++ M+ GL P+ T ++S +
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
+ + EA ELL M + G+ PS
Sbjct: 620 LRVNKIAEAYELLQNMLALGLRPS 643
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 29/270 (10%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
++ ++ F + +E+G D V Y + D K G +D A++M + ++ + D Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G+L A +F EM ++G P++VTYN++ + + A+ + +M++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
EP+ T+ +++E L G + EAEA F +Q K+ +Y +V+ + +A N
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN------ 589
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
VEKA++ + + + G +C LL+ V I +A +L
Sbjct: 590 ------------------VEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
L+ M +L + PS Y+++L + C G++K
Sbjct: 632 LQNMLALGLRPSLQTYTLLL-SCCTDGRSK 660
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 142/320 (44%), Gaps = 28/320 (8%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
++ G DG Y + L + + ++ +E+ + Y LI Y L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A +FN+M+ G KPD VTY L + +A++ + M++ G+ P++ T+ +I
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I L G + A F + D+ Y+ M++ + +A N N
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN------------- 522
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
A +L+ ++ N G + + ++ L G + +A + M+ N
Sbjct: 523 -----------ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P + +Y +++D G + A + + + G P+V T ++++++ R+N + EA +L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 311 FQDMKRRGIKPDVITYTVLL 330
Q+M G++P + TYT+LL
Sbjct: 632 LQNMLALGLRPSLQTYTLLL 651
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +AM + M+ +P ++ Y ++D G A ++ G +PD TY+
Sbjct: 415 LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSV 474
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWR 348
+IN + L A LF +M +G P+++TY +++ +++NA L +R
Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKL------YR 528
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
DM+ D V YS+++ L E+A +F +M K PD+ Y ++ L+ K G
Sbjct: 529 DMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+++A + M G+ P+ +++ + L+ K+
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKI 625
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 300 RMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
+MN AL F +KR+ G K D TYT ++ G+ A IN + +M + +
Sbjct: 340 QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGAINKLLDEMVRDGCQPN 398
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
V Y+ LI+ + + +A+ +F M + G +PD+VTY +I ++ K G + A ++
Sbjct: 399 TVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQ 458
Query: 419 EMSSKGMTPSSHIISAVNRSILKA 442
M + G++P + S + + KA
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKA 482
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 17/313 (5%)
Query: 130 THKMIIEGLCSVGKVGEAEAHF-----NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
TH +++ L K AE+ N D +++ A++ Y E D +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYREC---------DST 167
Query: 185 PTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
P + + + A + F+++ + G + ESC ++ L G + A++
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
MR + P+ ++V+ C GK L GF V+Y T+I +C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
L AL L M + G++P+V+T+ L++G F A L + ++ +MK ++ + V Y
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHG-FCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+ LING + ++E A R +EDM+ G++ D +TY +I K+ ++A++ + E+
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 423 KGMTPSSHIISAV 435
+ + P+S SA+
Sbjct: 407 ENLVPNSSTFSAL 419
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 25/328 (7%)
Query: 110 RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY 169
R A + F +M+ G P + + L G+V D ++ Y M
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV-----------DIALRFYREMRR-- 231
Query: 170 CEASNNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
C+ S N P ++ V GYC+ ++K EL ++ G A + S L+
Sbjct: 232 CKISPN---------PYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
C G + A+KL M ++P+ + ++ ++ C K + A +F P+
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
VTY T+IN Y + + A ++DM GI+ D++TY L++G K A +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV- 401
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+++ + + + +S LI G N + L++ MI G P++ T+ ++S + +
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAV 435
AS++L EM + + S + V
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQV 489
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 28/324 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ D F + K+ G + N +L G+VD A+ E+R I + ++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
GYC G L + +M+ GF+ V+YN L AG C A+ + M G++
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD 181
PN T +I G C K+ EA F ++ +V Y+ ++NGY + ++
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH------ 359
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
E A+ + ++ G + L+ LC KA + +
Sbjct: 360 ------------------EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + N+ P+ +S ++ C L+ S + G P+ T+ +++++CR
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 302 NSLKEALDLFQDMKRRGIKPDVIT 325
A + ++M RR I D T
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRT 485
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 21/292 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++E + + + N+V C+ GK+D IE+ +++ Y TLI G+C
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G L A + N M G +P++VT+N L G CR + + A F EM++ V PN+ T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD-------KSVEIYSAMVNGYCEASNNNNNYG--- 180
+ +I G + G+ E F +D + + Y+A++ G C+ +
Sbjct: 346 YNTLING---YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 181 --DDKSPTPISE------VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
D ++ P S +G C ++ +EL+ + G E++ L++ C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
D A ++L M ++ V + L H GK + + L G+ F
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
TP V + ++ ++ + + A D F MK G P V + + S +D+
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM-SSLLGQGRVDIAL 223
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+R+M++ +IS + +++++G ++ + I L +DM G V+Y +I+ +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+KGL+ A +L + M G+ P+ + + +A K+Q
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 145/313 (46%), Gaps = 17/313 (5%)
Query: 130 THKMIIEGLCSVGKVGEAEAHF-----NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
TH +++ L K AE+ N D +++ A++ Y E D +
Sbjct: 117 THAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYREC---------DST 167
Query: 185 PTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
P + + + A + F+++ + G + ESC ++ L G + A++
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
MR + P+ ++V+ C GK L GF V+Y T+I +C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
L AL L M + G++P+V+T+ L++G F A L + ++ +MK ++ + V Y
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHG-FCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+ LING + ++E A R +EDM+ G++ D +TY +I K+ ++A++ + E+
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 423 KGMTPSSHIISAV 435
+ + P+S SA+
Sbjct: 407 ENLVPNSSTFSAL 419
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 25/328 (7%)
Query: 110 RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY 169
R A + F +M+ G P + + L G+V D ++ Y M
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV-----------DIALRFYREMRR-- 231
Query: 170 CEASNNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
C+ S N P ++ V GYC+ ++K EL ++ G A + S L+
Sbjct: 232 CKISPN---------PYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
C G + A+KL M ++P+ + ++ ++ C K + A +F P+
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
VTY T+IN Y + + A ++DM GI+ D++TY L++G K A +
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV- 401
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+++ + + + +S LI G N + L++ MI G P++ T+ ++S + +
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAV 435
AS++L EM + + S + V
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQV 489
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 28/324 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ D F + K+ G + N +L G+VD A+ E+R I + ++
Sbjct: 186 NATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
GYC G L + +M+ GF+ V+YN L AG C A+ + M G++
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGD 181
PN T +I G C K+ EA F ++ +V Y+ ++NGY + ++
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH------ 359
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
E A+ + ++ G + L+ LC KA + +
Sbjct: 360 ------------------EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + N+ P+ +S ++ C L+ S + G P+ T+ +++++CR
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRN 461
Query: 302 NSLKEALDLFQDMKRRGIKPDVIT 325
A + ++M RR I D T
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRT 485
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 21/292 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++E + + + N+V C+ GK+D IE+ +++ Y TLI G+C
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G L A + N M G +P++VT+N L G CR + + A F EM++ V PN+ T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD-------KSVEIYSAMVNGYCEASNNNNNYG--- 180
+ +I G + G+ E F +D + + Y+A++ G C+ +
Sbjct: 346 YNTLING---YSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 181 --DDKSPTPISE------VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
D ++ P S +G C ++ +EL+ + G E++ L++ C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
D A ++L M ++ V + L H GK + + L G+ F
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
TP V + ++ ++ + + A D F MK G P V + + S +D+
Sbjct: 167 TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYM-SSLLGQGRVDIAL 223
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+R+M++ +IS + +++++G ++ + I L +DM G V+Y +I+ +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+KGL+ A +L + M G+ P+ + + +A K+Q
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQ 325
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 195/427 (45%), Gaps = 29/427 (6%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
SG+ D AY + + LCK G V A+++ E++ + Y L++G C+ G+L
Sbjct: 135 SGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQ 194
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
+ + KG P+ TY+ L + A+ DE+ G EPN ++ +++
Sbjct: 195 SLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLT 254
Query: 137 GLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYC-----EASNN--NNNYGDDKSP 185
G C G+ +A A F L K +V Y+ ++ C E +N+ G D++P
Sbjct: 255 GFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAP 314
Query: 186 TP------ISEVGYCKVDLVEKAYELFLELS--NKGDIAKEESCFKLLTKLCLVGDIGKA 237
+ I+ + + E+A ++ E+S N S ++ +LC G +
Sbjct: 315 SVVTYNILINSLAF--HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLV 372
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALC-HVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
+K L+ M +P++ Y+ + +LC H K + A + S + Y ++I
Sbjct: 373 VKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT 431
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIWRDMKQT 353
S CR + A L +M R G PD TY+ L+ G A++V+ +I + +
Sbjct: 432 SLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL-SIMEESENC 490
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ ++D ++ +I GL K + A+ +FE M++K P++ TY ++ + ++ A
Sbjct: 491 KPTVDN--FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELA 548
Query: 414 SELLDEM 420
E+LDE+
Sbjct: 549 KEVLDEL 555
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 173/432 (40%), Gaps = 33/432 (7%)
Query: 39 VDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNV 98
+ D+ E L ++ H T L+ C L A + M + G PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 99 LAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS 158
L +C+ A+ ++ME G N+ T+ ++ GLC +G + ++ RL K
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 159 VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV-----------------GYCKVDLVEK 201
+ + + EA+ G D++ + E+ G+CK +
Sbjct: 207 LAPNAFTYSFLLEAAYKER--GTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A LF EL KG A S LL LC G +A LL M + PS + Y+I+++
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILIN 324
Query: 262 ALCHVGKTKHARSLFDSFV--GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+L G+T+ A + F +Y +I C+ + + +M R
Sbjct: 325 SLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRC 384
Query: 320 KPDVITYTVLLYGSF-----KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
KP+ TY + GS K A +I ++ KQ + D Y +I L + N
Sbjct: 385 KPNEGTYNAI--GSLCEHNSKVQEAFYIIQSLSN--KQKCCTHDF--YKSVITSLCRKGN 438
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM-SSKGMTPSSHIIS 433
A +L +M G +PD TY+ +I +G+ A E+L M S+ P+ +
Sbjct: 439 TFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFN 498
Query: 434 AVNRSILKARKV 445
A+ + K R+
Sbjct: 499 AMILGLCKIRRT 510
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 166/384 (43%), Gaps = 70/384 (18%)
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ NL D+F + G KP++ L +C+ + + AI + M S G+ P+++
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
Y+ +VN C+ N
Sbjct: 144 -------------------------------YTYLVNQLCKRGN---------------- 156
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
VGY + LVEK + + G + + L+ LC++G + ++++ +E + +
Sbjct: 157 VGY-AMQLVEK-------MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P+ YS +L+A T A L D + +G P++V+Y ++ +C+ +A+ L
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 311 FQDMKRRGIKPDVITYTVLLY-----GSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
F+++ +G K +V++Y +LL G ++ A N++ +M + + VV Y++L
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEA------NSLLAEMDGGDRAPSVVTYNIL 322
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVT---YTDMISLYYKKGLMKEASELLDEMSS 422
IN L E A+++ ++M KG +VT Y +I+ K+G + + LDEM
Sbjct: 323 INSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 423 KGMTPSSHIISAVNRSILKARKVQ 446
+ P+ +A+ KVQ
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQ 405
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 134/318 (42%), Gaps = 26/318 (8%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V+YN++ CK G+ DDA+ + EL K ++ Y L++ C G +A + E
Sbjct: 247 VSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAE 306
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME--SDGVEPNSTTHKMIIEGLCSV 141
M P +VTYN+L + + A+ EM + +T++ +I LC
Sbjct: 307 MDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKE 366
Query: 142 GKVGEA-----EAHFNRLQDKSVEIYSAMVNGYCEA--------------SNNNNNYGDD 182
GKV E + R + Y+A + CE SN D
Sbjct: 367 GKVDLVVKCLDEMIYRRCKPNE-GTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHD 424
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
+ I+ + C+ A++L E++ G + L+ LCL G AM++L
Sbjct: 425 FYKSVITSL--CRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLS 482
Query: 243 TMR-SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
M S N +P+ ++ ++ LC + +T A +F+ V + P+ TY ++
Sbjct: 483 IMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Query: 302 NSLKEALDLFQDMKRRGI 319
+ L+ A ++ +++ R +
Sbjct: 543 DELELAKEVLDELRLRKV 560
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 107/303 (35%), Gaps = 65/303 (21%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D + F+E G + V+YNI+ LC G+ ++A + E+ + + Y
Sbjct: 260 GRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTY 319
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMK--NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
LI G A + EM N F+ +YN + A +C+ + + + DEM
Sbjct: 320 NILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEM 379
Query: 120 ESDGVEPNSTTH-----------------------------------KMIIEGLCSVGKV 144
+PN T+ K +I LC +
Sbjct: 380 IYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC---RK 436
Query: 145 GEAEAHFNRLQ-------DKSVEIYSAMVNGYC---------------EASNNNNNYGDD 182
G A F L D YSA++ G C E S N D+
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDN 496
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
+ + G CK+ + A E+F + K + E + L+ + ++ A ++L+
Sbjct: 497 FNAMIL---GLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLD 553
Query: 243 TMR 245
+R
Sbjct: 554 ELR 556
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ + F + +E G ++ +N + D L K V DA ++ ++++ K + DIK YT L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+G+ + NL+ + EMK++GF+PD+V Y ++ C+ + AI F+EME +
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGD 181
P+ +I GL S K+ +A F R + + Y+A+V YC +
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR------- 352
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+E AY+ E+ KG + +L L + +A ++
Sbjct: 353 -----------------MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY 395
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+TM + EP+ Y I++ C+ + A ++D G+G P + ++++I + C
Sbjct: 396 QTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 302 NSLKEALDLFQDMKRRGIKP 321
N L EA + F +M GI+P
Sbjct: 453 NKLDEACEYFNEMLDVGIRP 472
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 154/353 (43%), Gaps = 38/353 (10%)
Query: 95 TYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL 154
T+ +++ R + + AI F +ME G + S+ +++ L VG+A+ F+++
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 155 QDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELS 210
+ K E Y+ ++ G+ + E+ +VD V + E+
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQ------------------ELNLLRVDEVNR------EMK 259
Query: 211 NKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
++G + ++ C +A++ M N +PS ++ +++ L K
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
A F+ GF + TY ++ +YC +++A +M+ +G+ P+ TY ++L
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Query: 331 YGSF---KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
+ ++ A +V T+ V Y +++ + + AI+++++M
Sbjct: 380 HHLIRMQRSKEAYEVYQTM-------SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKG 432
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSIL 440
KG+ P ++ +I+ + + EA E +EM G+ P H+ S + +++L
Sbjct: 433 KGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLL 485
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 153/360 (42%), Gaps = 26/360 (7%)
Query: 77 AFYMFNEMKN-KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
A +F +N KGFK YN L + + + ++ + D+M++ + + T +I
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALIS 169
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
KV EA F+++++ ++ S+ N + + + N GD + + +
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
D+ K+Y + LE + L V ++ + MK EP +
Sbjct: 230 PDI--KSYTILLEGWGQE------------LNLLRVDEVNREMK------DEGFEPDVVA 269
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
Y I+++A C K + A F+ R P + ++IN L +AL+ F+ K
Sbjct: 270 YGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK 329
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
G + TY L+ + D T+ +M+ + + Y ++++ L++
Sbjct: 330 SSGFPLEAPTYNALVGAYCWSQRMEDAYKTV-DEMRLKGVGPNARTYDIILHHLIRMQRS 388
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
++A +++ M EP TY M+ ++ K + A ++ DEM KG+ P H+ S++
Sbjct: 389 KEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSL 445
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 53/260 (20%)
Query: 222 FKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG 281
FKL+ LV D+ KA KLL S+ ++++ K K A F
Sbjct: 144 FKLI--WSLVDDM-KAKKLL----------SKETFALISRRYARARKVKEAIGAFHKMEE 190
Query: 282 RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSFKNAAA 339
GF + + M+++ + ++ +A +F MK++ +PD+ +YT+LL +G N
Sbjct: 191 FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLR 250
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEP------- 392
+D +N R+MK DVV Y ++IN K YE+AIR F +M + +P
Sbjct: 251 VDEVN---REMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 393 ----------------------------DKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
+ TY ++ Y M++A + +DEM KG
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 425 MTPSSHIISAVNRSILKARK 444
+ P++ + +++ ++
Sbjct: 368 VGPNARTYDIILHHLIRMQR 387
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 3/152 (1%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+D ++ F+ K SG L+ YN + A C +++DA + +E+R+K + + + Y +
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ +A+ ++ M +P + TY ++ C + +AI +DEM+ GV
Sbjct: 379 LHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD 156
P +I LC K+ EA +FN + D
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLD 467
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 147/332 (44%), Gaps = 29/332 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+V + F++ E G+ + + + C G ++A+ ++ E+ K I + Y TL+
Sbjct: 327 EVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLM 386
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
Y ++ + +F EM++KG KP TYN+L R + + EME G+E
Sbjct: 387 DAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE 446
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEA-HFNRLQD----KSVEIYSAMVNGYCEASNNNNNYG 180
PN ++ +I K+ + A F R++ S Y+A+++ Y
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAY----------- 495
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
S G+ EKAY F E+ +G E+ +L GD GK M++
Sbjct: 496 --------SVSGWH-----EKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ M ++ ++I Y+ +LD G AR + F G P V+TY ++N+Y R
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
+ L ++M +KPD ITY+ ++Y
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYA 634
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 178/406 (43%), Gaps = 41/406 (10%)
Query: 46 REELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
+EE R D++ Y I G DA+ ++ M PD VT +L + +
Sbjct: 267 KEEFR------DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRK 320
Query: 106 -NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSA 164
A+ F++M GV+ + +++ C G EA ++ K + +
Sbjct: 321 AGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI 380
Query: 165 MVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ N +A N +N+ +E+ LF E+ +KG + + + +
Sbjct: 381 VYNTLMDAYNKSNH--------------------IEEVEGLFTEMRDKG-LKPSAATYNI 419
Query: 225 LTKLC---LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF-DSFV 280
L + DI + LL M L +EP+ Y+ ++ A G+TK + D+F+
Sbjct: 420 LMDAYARRMQPDIVET--LLREMEDLGLEPNVKSYTCLISA---YGRTKKMSDMAADAFL 474
Query: 281 GR---GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
G P +YT +I++Y ++A F++M + GIKP V TYT +L +F+ +
Sbjct: 475 RMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL-DAFRRS 533
Query: 338 AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
+ IW+ M + +I + Y+ L++G K Y +A + + GL+P +TY
Sbjct: 534 GDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTY 593
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
+++ Y + G + +LL EM++ + P S S + + ++ R
Sbjct: 594 NMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVR 639
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 168/416 (40%), Gaps = 35/416 (8%)
Query: 20 FLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG-NLIDAF 78
F D YN L + DDA E+ E + N+ D LI G + + +
Sbjct: 270 FRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVW 329
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+F +M KG K + L C A+ EME G+ N+ + +++
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 139 CSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
+ E E F ++DK ++ +A N +A Y P D+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDA------YARRMQP-----------DI 432
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE-------TMRSLNVEP 251
VE L E+ + G E K T CL+ G+ K+ + M+ + ++P
Sbjct: 433 VET---LLREMEDLG----LEPNVKSYT--CLISAYGRTKKMSDMAADAFLRMKKVGLKP 483
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
S Y+ ++ A G + A + F+ G P V TYT++++++ R + ++++
Sbjct: 484 SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIW 543
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+ M R IK ITY LL G K ++ + + + + + V+ Y++L+N +
Sbjct: 544 KLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVV-SEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+L ++M L+PD +TY+ MI + + K A M G P
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 21/282 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E ++ G+ YNI+ DA + + D + E+ ++ ++K YT LI Y
Sbjct: 402 FTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGR 461
Query: 71 QGNLID-AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ D A F MK G KP +Y L + A +F+EM +G++P+
Sbjct: 462 TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVE 521
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
T+ +++ G G K +EI+ M+ + + N D
Sbjct: 522 TYTSVLDAFRRSGDTG-----------KLMEIWKLMLREKIKGTRITYNTLLD------- 563
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
G+ K L +A ++ E S G + L+ G K +LL+ M +LN+
Sbjct: 564 --GFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNL 621
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
+P I YS ++ A V K A V G PD +Y
Sbjct: 622 KPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 170/412 (41%), Gaps = 75/412 (18%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDL----DIKHYTTLIKGYCLQGNLIDAFYMFN 82
NI ++LCK ++ A E L + I L D+ Y TLIKGY + +A+ +
Sbjct: 17 NISVNSLCKFRNLERA----ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
M+ G +PD+ TYN L +G +N + FDEM G+ P+ ++ ++ +G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 143 KVGEA------EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
+ GEA + H L ++ Y+ +++ C++ + +N
Sbjct: 133 RHGEAFKILHEDIHLAGLV-PGIDTYNILLDALCKSGHTDN------------------- 172
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
A ELF L ++ V+P + Y
Sbjct: 173 -----AIELFKHLKSR------------------------------------VKPELMTY 191
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+I+++ LC + + G+TP+ VTYTTM+ Y + +++ L LF MK+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G D ++ K A + + ++ S D+V Y+ L+N K N +
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLD 311
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L E++ KGL+PD T+T +++ G A + L + GM PS
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPS 363
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 192/437 (43%), Gaps = 52/437 (11%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ D + YN + + +D+A + +R I+ D+ Y +LI G L
Sbjct: 43 GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRV 102
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAA---GVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+F+EM + G PD+ +YN L + + R+ EA ++ +++ G+ P T+ ++
Sbjct: 103 LQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILH--EDIHLAGLVPGIDTYNIL 160
Query: 135 IEGLCSVGKVGEAEAHFNRLQDK---SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
++ LC G A F L+ + + Y+ ++NG C++ V
Sbjct: 161 LDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKS----------------RRV 204
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
G VD + + EL G + +L I K ++L M+
Sbjct: 205 G--SVDWMMR------ELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTF 256
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF-TPDVVTYTTMINSYCRMNSLKEALDL 310
V+ AL G+ + A V G + D+V+Y T++N Y + +L DL
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD-----MKQTEISLDVVCYSVL 365
++++ +G+KPD T+T+++ G L++ NT + + + + VV + L
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNG------LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCL 370
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
I+GL K + + A+RLF M + D+ TYT ++ K G + AS+LL +KGM
Sbjct: 371 IDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGM 426
Query: 426 TPSSHIISAVNRSILKA 442
I S+ R++L
Sbjct: 427 ----KIPSSARRAVLSG 439
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 144/337 (42%), Gaps = 27/337 (8%)
Query: 3 MDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIE-MREELRVKNIDLDIKHY 61
M + V+ F E SG+ D +YN + KLG+ +A + + E++ + + I Y
Sbjct: 98 MLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTY 157
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
L+ C G+ +A +F +K++ KP+++TYN+L G+C++ E++
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G PN+ T+ +++ ++ +K ++++ M Y
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRI-----------EKGLQLFLKM---------KKEGYTF 256
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDIGKAMKL 240
D K E+AYE EL G +++ + L L G++ L
Sbjct: 257 DGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDL 316
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
LE + ++P ++I+++ L ++G T A G P VVT +I+ C+
Sbjct: 317 LEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK 376
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
+ A+ LF M+ R D TYT +++ K+
Sbjct: 377 AGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDG 409
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKG---DIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
IS CK +E+A L ++ G D+ + K T+ +G I +A + M
Sbjct: 18 ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRF--IG-IDEAYAVTRRM 74
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
R +EP Y+ ++ LFD + G +PD+ +Y T+++ Y ++
Sbjct: 75 REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRH 134
Query: 305 KEALD-LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
EA L +D+ G+ P + TY +LL K+ + I +++ +K + + +++ Y+
Sbjct: 135 GEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE-LFKHLK-SRVKPELMTYN 192
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+LINGL K+ + ++ G P+ VTYT M+ +Y+K +++ +L +M +
Sbjct: 193 ILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 424 GMTPSSHIISAVNRSILKARKVQ 446
G T AV +++K + +
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAE 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 3/195 (1%)
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
S + +I +++LC + A +L + G PDV+TY T+I Y R + EA +
Sbjct: 12 STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVT 71
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+ M+ GI+PDV TY L+ G+ KN L+ + ++ +M + +S D+ Y+ L++ K
Sbjct: 72 RRMREAGIEPDVTTYNSLISGAAKN-LMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 372 TDNYEDAIR-LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ +A + L ED+ GL P TY ++ K G A EL + S+ + P
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELM 189
Query: 431 IISAVNRSILKARKV 445
+ + + K+R+V
Sbjct: 190 TYNILINGLCKSRRV 204
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 168/370 (45%), Gaps = 27/370 (7%)
Query: 54 IDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM--KNKGFKPDIVTYNVLAAGVCRNDEARV 111
I LD+K + ++++ Y + D +F + F+P T+ +L + CR ++ +
Sbjct: 81 IPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSI 140
Query: 112 AINN--FDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAM 165
+ + + M ++G+EP+ T + + LC G+V EA+ L +K Y+ +
Sbjct: 141 SNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFL 200
Query: 166 VNGYCEASNNNNNY--------GDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKG 213
+ C+ + + Y D P +S C + +A L +L N G
Sbjct: 201 LKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 214 DIAKEESCF---KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
+ CF ++ C + +A+ + + M+ VEP QI Y+ ++ L G+ +
Sbjct: 261 ---FKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVE 317
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
AR + V G+ PD TYT+++N CR AL L ++M+ RG P+ TY LL
Sbjct: 318 EARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLL 377
Query: 331 YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL 390
+G K A +D ++ MK + + L+ Y+ L+ L+K+ +A +F+ +D
Sbjct: 378 HGLCK-ARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKS 436
Query: 391 EPDKVTYTDM 400
D Y+ +
Sbjct: 437 LSDASAYSTL 446
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
NN D+ T I+ C+ V++A +L EL+ K + LL LC D+
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 236 KAMKLLETMRS-LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+ ++ MR +V+P + ++I++D +C+ + A L GF PD Y T+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
+ +C ++ EA+ +++ MK G++PD ITY L++G A ++ + M
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFG-LSKAGRVEEARMYLKTMVDAG 330
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
D Y+ L+NG+ + A+ L E+M +G P+ TY ++ K LM +
Sbjct: 331 YEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGM 390
Query: 415 ELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
EL + M S G+ S+ + + RS++K+ KV
Sbjct: 391 ELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 134/318 (42%), Gaps = 39/318 (12%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIKHYTTLIKG 67
D KE E D YN + LCK + E +E+R ++ D+ +T LI
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C NL +A Y+ +++ N GFKPD YN + G C + A+ + +M+ +GVEP+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDK 183
T+ +I GL G+V EA + + D E Y++++NG C +
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGES-------- 351
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+G A L E+ +G + + LL LC + K M+L E
Sbjct: 352 -------LG---------ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEM 395
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M+S V+ Y+ ++ +L GK A +FD V D Y+T
Sbjct: 396 MKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST---------- 445
Query: 304 LKEALDLFQDMKRRGIKP 321
L+ L + K +G+ P
Sbjct: 446 LETTLKWLKKAKEQGLVP 463
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ V +K+ KE G+ D + YN + L K G+V++A + + + D YT+L
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G C +G + A + EM+ +G P+ TYN L G+C+ + ++ M+S GV
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD-KSVEIYSA 164
+ S + ++ L GKV EA F+ D KS+ SA
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASA 442
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 248 NVEPSQIMYSIVLDALCHVGKTK--HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
N P + + I+L C + + + + V G PD VT + S C +
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT-EISLDVVCYSV 364
EA DL +++ + PD TY LL K L V+ +M+ ++ D+V +++
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCK-CKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI+ + + N +A+ L + + G +PD Y ++ + EA + +M +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 425 MTPSSHIISAVNRSILKARKVQ 446
+ P + + + KA +V+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVE 317
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 193/456 (42%), Gaps = 29/456 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G ++D V Y + CK + A+ + + ++ +LD + TLI G+
Sbjct: 260 FDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMK 319
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-DEMESDGVEPNST 129
G L MF++M KG + ++ TY+++ C+ A+ F + S+ + N
Sbjct: 320 LGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVH 379
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSV------------------EIYSAMVNGYCE 171
+ +I G G + +A R+ D + E+ AMV
Sbjct: 380 CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMV---IL 436
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
S +N G + P I ++G +V K L E++ K + T LC
Sbjct: 437 QSILDNGCGIN--PPVIDDLGNIEV----KVESLLGEIARKDANLAAVGLAVVTTALCSQ 490
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
+ A+ +E M +L P Y+ V+ L + SL + F PDV TY
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
++N C+ N A + M+ G++P V Y+ ++ GS + + M
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII-GSLGKQGRVVEAEETFAKML 609
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
++ I D + Y ++IN + ++A L E+++ L P TYT +IS + K G+M+
Sbjct: 610 ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Query: 412 EASELLDEMSSKGMTPSSHIISAVNRSILKARKVQF 447
+ + LD+M G++P+ + +A+ LK +F
Sbjct: 670 KGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKF 705
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 186/424 (43%), Gaps = 21/424 (4%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEM-REELRVKNIDLDIKHYTTLIKGYC 69
F + + G+ + Y+I+ + CK G VD A+ + ++I ++ YT LI G+
Sbjct: 330 FSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+G + A + M + G PD +TY VL + + E + A+ + +G N
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 130 TH------KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEA-SNNNNNYGDD 182
++ +E L +G++ +A+ + V Y A S
Sbjct: 450 VIDDLGNIEVKVESL--LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG 507
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKE-------ESCFKLLTKLCLVGDIG 235
+P P S K E E +L++ +I +E ++ ++ +LC D
Sbjct: 508 CTPLPFSYNSVIKCLFQENIIE---DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRD 564
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A +++ M L + P+ +YS ++ +L G+ A F + G PD + Y MI
Sbjct: 565 AAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMI 624
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N+Y R + EA +L +++ + ++P TYTVL+ G F ++ M + +
Sbjct: 625 NTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG-FVKMGMMEKGCQYLDKMLEDGL 683
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
S +VV Y+ LI +K +++ + LF M + ++ D + Y ++S ++ K+ +
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQ 743
Query: 416 LLDE 419
++ E
Sbjct: 744 VIVE 747
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 115/531 (21%), Positives = 209/531 (39%), Gaps = 113/531 (21%)
Query: 4 DSDVVD-------KFKEFKESGMFLDGV----------AYNIVFDALCKLGKVDDAIEMR 46
DS V+D K + F E+ LD + + ++V D LC + +A
Sbjct: 130 DSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCF 189
Query: 47 EELRVKNIDLDIKHYTTLIKGYCLQGNLIDA-----------------------FY---- 79
E+++ + L + L KG C G+L +A FY
Sbjct: 190 EQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCK 249
Query: 80 ---------MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+F+ M+ G+ D V Y L C+++ +A+ + M E +
Sbjct: 250 RGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCI 309
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNN-------NNY 179
+I G +G + + F+++ K V+ Y M+ YC+ N + NN
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 180 GDDKSPTPISEVGYCKVDLV---------EKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
G + IS +C +L+ +KA +L + + + G + + F LL L
Sbjct: 370 GSED----ISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 231 VGDIGKAMKLLETM--RSLNVEP---------------------------SQIMYSIVLD 261
++ AM +L+++ + P + + ++V
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
ALC A S + V G TP +Y ++I + N +++ L ++ P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 322 DVITYTVLLYGSFKNA---AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
DV TY +++ K AA +I+ M++ + V YS +I L K +A
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDA----MEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
F M++ G++PD++ Y MI+ Y + G + EA+EL++E+ + PSS
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSS 652
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 183/422 (43%), Gaps = 58/422 (13%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
Y IV + LCK D A + + + + + Y+++I QG +++A F +M
Sbjct: 550 YLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKML 609
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
G +PD + Y ++ RN A +E+ + P+S T+ ++I G +G +
Sbjct: 610 ESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME 669
Query: 146 EAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
+ + +++ + +V +Y+A++ + + GD K
Sbjct: 670 KGCQYLDKMLEDGLSPNVVLYTALIGHFLKK-------GDFKF----------------- 705
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP---------- 251
++ LF L + DI + + + L+ + +AM + R + VEP
Sbjct: 706 SFTLF-GLMGENDIKHDHIAY-----ITLLSGLWRAMAR-KKKRQVIVEPGKEKLLQRLI 758
Query: 252 -SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
++ + SI +L + G A + V + P++ + T+I YC L EA +
Sbjct: 759 RTKPLVSIP-SSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+ M++ GI P+++TYT+L+ + +A+D+ + T D V YS L+
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF-------EGTNCEPDQVMYSTLLK 869
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
GL DA+ L +M G+ P+K +Y ++ L EA +++ +M++ + P
Sbjct: 870 GLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWP 929
Query: 428 SS 429
S
Sbjct: 930 RS 931
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 138/340 (40%), Gaps = 20/340 (5%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ F + ESG+ D +AY I+ + + G++D+A E+ EE+ + YT LI G+
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
G + ++M G P++V Y L + + + + F M + ++ +
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 129 TTHKMIIEGLCS----------VGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
+ ++ GL + + G+ + ++ K + + + Y S
Sbjct: 723 IAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEV 782
Query: 179 YGD-DKSPTP------ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
G KS P GYC +++AY + +G + + L+
Sbjct: 783 IGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEA 842
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
GDI A+ L E N EP Q+MYS +L LC + A +L G P+ +Y
Sbjct: 843 GDIESAIDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY 331
++ C EA+ + +DM I P I +T L+Y
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIY 939
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 31/360 (8%)
Query: 54 IDLDIKHYTTLIKGYCLQGN--LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVC---RNDE 108
I+LD Y LI+ G + + FY + N G PD + + + R DE
Sbjct: 91 IELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGN-GIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 109 ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIY----SA 164
AR + D + + G P+ + ++++ LC+ + EA F +++++ ++
Sbjct: 150 ARA---HLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKR 206
Query: 165 MVNGYCEASNNNNNYGD-------DKSPTPISEVG-----YCKVDLVEKAYELFLELSNK 212
+ G C + N G + P P++ +CK +A LF +
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 213 GDIAKEESCFKLLTKLCLVGDIGKAMKLLETM--RSLNVEPSQIMYSIVLDALCHVGKTK 270
G + L+ + C ++ AM+L M RS ++P +++ ++ +G
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPC--IFNTLIHGFMKLGMLD 324
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF-QDMKRRGIKPDVITYTVL 329
R +F + +G +V TY MI SYC+ ++ AL LF + I +V YT L
Sbjct: 325 KGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNL 384
Query: 330 LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
++G +K ++ + R M I D + Y VL+ L K + A+ + + ++D G
Sbjct: 385 IFGFYKKGGMDKAVDLLMR-MLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNG 443
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + + + ++ G+ + V Y I+ + + G ++ AI++ E N + D Y
Sbjct: 808 GRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEG---TNCEPDQVMY 864
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+TL+KG C +DA + EM+ G P+ +Y L +C + A+ +M +
Sbjct: 865 STLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAA 924
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
+ P S H +I LC K+ EA A F + + + G + N N
Sbjct: 925 LDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLLKMLNQNQQ 981
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 169 YCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK- 227
+C A+ D ++ + + K E + E+ KG + E F + K
Sbjct: 182 FCWAAERQGFAHDSRTYNSMMSI-LAKTRQFETMVSVLEEMGTKGLLTME--TFTIAMKA 238
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
+ KA+ + E M+ + + +LD+L K A+ LFD R FTP+
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPN 297
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
++TYT ++N +CR+ +L EA ++ DM +G+KPD++ + V+L G ++ D I ++
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK-LF 356
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
MK +V Y+++I K + E AI F+DM+D GL+PD YT +I+ + +
Sbjct: 357 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAV 435
+ ELL EM KG P +A+
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 165/417 (39%), Gaps = 65/417 (15%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ G D YN + L K + + + + EE+ K + L ++ +T +K +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A +F MK FK + T N L +
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSL------------------------------- 274
Query: 135 IEGLCSVGKVGEAEAHFNRLQDK---SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
G +GK EA+ F++L+++ ++ Y+ ++NG+C N + E
Sbjct: 275 --GRAKLGK--EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN-------------LIEA 317
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
D++++ K DI +L L A+KL M+S P
Sbjct: 318 ARIWNDMIDQGL--------KPDIVAHNV---MLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ Y+I++ C + A FD V G PD YT +I + L +L
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
++M+ +G PD TY L+ N + I+ M Q EI + +++++
Sbjct: 427 KEMQEKGHPPDGKTYNALI-KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TP 427
NYE ++E+MI KG+ PD +YT +I +G +EA L+EM KGM TP
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 542
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 147/307 (47%), Gaps = 35/307 (11%)
Query: 27 NIVFDAL--CKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
N + D+L KLGK +A + ++L+ + ++ YT L+ G+C NLI+A ++N+M
Sbjct: 268 NCLLDSLGRAKLGK--EAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
++G KPDIV +NV+ G+ R+ + AI F M+S G PN ++ ++I C +
Sbjct: 325 IDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 145 GEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
A +F+ + D ++ +Y+ ++ G +G K K+D V
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITG----------FGTQK-----------KLDTV- 422
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLNVEPSQIMYSIV 259
YEL E+ KG + + L KL + + A ++ M +EPS ++++
Sbjct: 423 --YELLKEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMI 479
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ + + R++++ + +G PD +YT +I +EA ++M +G+
Sbjct: 480 MKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGM 539
Query: 320 KPDVITY 326
K +I Y
Sbjct: 540 KTPLIDY 546
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 8/221 (3%)
Query: 229 CLVGDIGKAMKLLETMRSL------NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
CL+ +G+A KL + + L P+ + Y+++L+ C V A +++ + +
Sbjct: 269 CLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ 327
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PD+V + M+ R +A+ LF MK +G P+V +YT+++ F ++++
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIR-DFCKQSSMET 386
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ DM + + D Y+ LI G + L ++M +KG PD TY +I
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
L + + + A+ + ++M + PS H + + +S AR
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMAR 487
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD + F K G + +Y I+ CK ++ AIE +++ + D YT L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I G+ Q L + + EM+ KG PD TYN L + A +++M + +
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEI 469
Query: 125 EPNSTTHKMIIE 136
EP+ T MI++
Sbjct: 470 EPSIHTFNMIMK 481
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 39/199 (19%)
Query: 268 KTKHAR-SLFDSFVG----RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
+ +HAR F F +GF D TY +M++ + + + + ++M +G+
Sbjct: 170 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-T 228
Query: 323 VITYTVL------------------LYGSFKNAAALDVINTIWRDM------KQTEISLD 358
+ T+T+ L +K ++ IN + + K+ ++ D
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 359 ---------VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
++ Y+VL+NG + N +A R++ DMID+GL+PD V + M+ +
Sbjct: 289 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 410 MKEASELLDEMSSKGMTPS 428
+A +L M SKG P+
Sbjct: 349 KSDAIKLFHVMKSKGPCPN 367
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/463 (22%), Positives = 197/463 (42%), Gaps = 58/463 (12%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ ++ + KE +E+ D V YN + A + G +A + E + K + + Y
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TT+I Y G +A +F MK G P+ TYN + + + + + I +M+S
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV-EIYSAMVNGYCEASNNNNNYG 180
+G PN T ++ LC N+ DK V ++ M + E + N
Sbjct: 450 NGCSPNRATWNTML-ALCG-----------NKGMDKFVNRVFREMKSCGFEPDRDTFN-- 495
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
T IS G C ++ A +++ E++ G A + LL L GD +
Sbjct: 496 -----TLISAYGRCGSEV--DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVG----------KTKHA---------RSL------ 275
+ M+S +P++ YS++L G + K R+L
Sbjct: 549 ISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFK 608
Query: 276 ----------FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
F F G+ PD+V + +M++ + R N +A + + ++ G+ PD++T
Sbjct: 609 CRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT 668
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
Y L+ + I + ++++++ D+V Y+ +I G + ++A+R+ +M
Sbjct: 669 YNSLMDMYVRRGECWKA-EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEM 727
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
++G+ P TY +S Y G+ E ++++ M+ P+
Sbjct: 728 TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPN 770
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 160/393 (40%), Gaps = 28/393 (7%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTY 96
K+ D I ++E L LD++ YTT++ Y G A +F MK G P +VTY
Sbjct: 195 AKLLDKIPLQEYL------LDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTY 248
Query: 97 NVLAAGVCRNDEA-RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
NV+ + + R + DEM S G++ + T ++ G + EA+ F L+
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 156 DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDI 215
E + N + Y + S E C D V Y + +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV--TYNELVAAYVRAGF 366
Query: 216 AKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL 275
+KE A ++E M V P+ I Y+ V+DA GK A L
Sbjct: 367 SKE------------------AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
F S G P+ TY +++ + + E + + DMK G P+ T+ +L
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCG 467
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
N +N ++R+MK D ++ LI+ + + DA +++ +M G
Sbjct: 468 NKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT 527
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
TY +++ +KG + ++ +M SKG P+
Sbjct: 528 TYNALLNALARKGDWRSGENVISDMKSKGFKPT 560
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 180/450 (40%), Gaps = 33/450 (7%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAI-EMREELRVKNIDLDIKH 60
G +D F+ KE G V YN++ D K+G+ I + +E+R K + D
Sbjct: 224 GKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFT 283
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+T++ +G L +A F E+K+ G++P VTYN L + A++ EME
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNN 176
+ +S T+ ++ G EA + K V Y+ +++ Y +A +
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL----------- 225
K + E G A LS G ++ K+L
Sbjct: 404 EAL---KLFYSMKEAGCVPNTCTYNAV-----LSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 226 -----TKLCLVGDIGK---AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
T L L G+ G ++ M+S EP + ++ ++ A G A ++
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 278 SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
GF V TY ++N+ R + ++ DMK +G KP +Y+++L K
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 338 AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
L I I +K+ +I + L+ K + R F G +PD V +
Sbjct: 576 NYLG-IERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTP 427
M+S++ + + +A +L+ + G++P
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 161/376 (42%), Gaps = 39/376 (10%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAI-EMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+ K +G + +N + ALC +D + + E++ + D + TLI Y
Sbjct: 446 DMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G+ +DA M+ EM GF + TYN L + R + R N +M+S G +P T++
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSA--------MVNGYCEASNNNNNYGDDK 183
++++ G E NR+++ +I+ + + N C A +
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEG--QIFPSWMLLRTLLLANFKCRALAGS------- 615
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
E+A+ LF + K D+ S + T+ + +A +LE+
Sbjct: 616 ----------------ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD---QAEGILES 656
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
+R + P + Y+ ++D G+ A + + PD+V+Y T+I +CR
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
++EA+ + +M RGI+P + TY + G + I + M + + + + +
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSG-YTAMGMFAEIEDVIECMAKNDCRPNELTFK 775
Query: 364 VLINGLMKTDNYEDAI 379
++++G + Y +A+
Sbjct: 776 MVVDGYCRAGKYSEAM 791
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 5/234 (2%)
Query: 208 ELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG 267
E+ +KG E +C +L+ G + +A + ++S EP + Y+ +L G
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 268 KTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT 327
A S+ D VTY ++ +Y R KEA + + M ++G+ P+ ITYT
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 328 VLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
++ ++ A D ++ MK+ + Y+ +++ L K + I++ DM
Sbjct: 391 TVI-DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 388 KGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS----SHIISAVNR 437
G P++ T+ M++L KG+ K + + EM S G P + +ISA R
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN-SLKEALDLFQDM 314
Y+ +L A GK + A LF+ G +P +VTY +++ + +M S ++ L + +M
Sbjct: 213 YTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEM 272
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
+ +G+K D T + +L + L + ++K V Y+ L+ K
Sbjct: 273 RSKGLKFDEFTCSTVLSACAREGL-LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
Y +A+ + ++M + D VTY ++++ Y + G KEA+ +++ M+ KG+ P++ +
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 435 VNRSILKARK 444
V + KA K
Sbjct: 392 VIDAYGKAGK 401
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 4/166 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F FK+ G D V +N + + D A + E +R + D+ Y +L+ Y
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G A + ++ KPD+V+YN + G CR + A+ EM G+ P T
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 738
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEA 172
+ + G ++G E E + + +V+GYC A
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 151/357 (42%), Gaps = 60/357 (16%)
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
N + FY + GFK D TY + + R + DEM DG +PN+ T+
Sbjct: 341 NALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVG 192
+I + EA FN++Q+ CE V
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAG-----------CEPD----------------RVT 431
Query: 193 YCK-VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
YC +D+ KA FL++ AM + + M+ + P
Sbjct: 432 YCTLIDIHAKAG--FLDI---------------------------AMDMYQRMQEAGLSP 462
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
YS++++ L G A LF VG+G TP++VT+ MI + + + + AL L+
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+DM+ G +PD +TY++++ + L+ ++ +M++ D Y +L++ K
Sbjct: 523 RDMQNAGFQPDKVTYSIVME-VLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGK 581
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
N + A + ++ M+ GL P+ T ++S + + M EA LL M + G+ PS
Sbjct: 582 AGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ ++ F + +E+G D V Y + D K G +D A++M + ++ + D Y+ +I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G+L A +F EM +G P++VT+N++ A + A+ + +M++ G +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGD 181
P+ T+ +++E L G + EAE F +Q K+ +Y +V+ + +A N
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN------- 584
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
V+KA++ + + G +C LL+ V + +A LL
Sbjct: 585 -----------------VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD-SFVGR 282
++M +L + PS Y+++L + C ARS FD F G+
Sbjct: 628 QSMLALGLHPSLQTYTLLL-SCC-----TDARSNFDMGFCGQ 663
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 20/316 (6%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
++ G DG Y + L + + + ++ +E+ + Y LI Y L
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A +FN+M+ G +PD VTY L + +A++ + M+ G+ P++ T+ +I
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
I L GK G A + ++ MV C + N I +
Sbjct: 471 INCL---GKAGHLPA--------AHRLFCEMVGQGCTPNLVTFN---------IMIALHA 510
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K E A +L+ ++ N G + + ++ L G + +A + M+ N P +
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
+Y +++D G A + + + G P+V T ++++++ R++ + EA +L Q M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 315 KRRGIKPDVITYTVLL 330
G+ P + TYT+LL
Sbjct: 631 LALGLHPSLQTYTLLL 646
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+AM + M+ EP ++ Y ++D G A ++ G +PD TY+ +I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N + L A LF +M +G P+++T+ +++ K A + ++RDM+
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK-ARNYETALKLYRDMQNAGF 530
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
D V YS+++ L E+A +F +M K PD+ Y ++ L+ K G + +A +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 416 LLDEMSSKGMTPSSHIISAVNRSILKARKV 445
M G+ P+ +++ + L+ ++
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRM 620
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 300 RMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
+M++ AL F +KR+ G K D TYT ++ G+ A IN + +M + +
Sbjct: 335 QMDNYANALGFFYWLKRQPGFKHDGHTYTTMV-GNLGRAKQFGEINKLLDEMVRDGCKPN 393
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
V Y+ LI+ + + ++A+ +F M + G EPD+VTY +I ++ K G + A ++
Sbjct: 394 TVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQ 453
Query: 419 EMSSKGMTPSSHIISAVNRSILKA 442
M G++P + S + + KA
Sbjct: 454 RMQEAGLSPDTFTYSVIINCLGKA 477
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 34/301 (11%)
Query: 8 VDKFKEFKESGMFLD----------GVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLD 57
+ + K+F E LD V YN + + + + +A+ + +++ + D
Sbjct: 369 LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPD 428
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
Y TLI + G L A M+ M+ G PD TY+V+ + + A F
Sbjct: 429 RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFC 488
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
EM G PN T ++I A+A R + ++++Y M N +
Sbjct: 489 EMVGQGCTPNLVTFNIMI--------ALHAKA---RNYETALKLYRDMQNAGFQP----- 532
Query: 178 NYGDDKSPTPISEV-GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC-LVGDIG 235
D + + + EV G+C +E+A +F E+ K + +E + LL L G++
Sbjct: 533 ---DKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRK-NWVPDEPVYGLLVDLWGKAGNVD 586
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
KA + + M + P+ + +L V + A +L S + G P + TYT ++
Sbjct: 587 KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Query: 296 N 296
+
Sbjct: 647 S 647
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 169 YCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK- 227
+C A+ D ++ + + K E + E+ KG + E F + K
Sbjct: 181 FCWAAERQGFAHDSRTYNSMMSI-LAKTRQFETMVSVLEEMGTKGLLTME--TFTIAMKA 237
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
+ KA+ + E M+ + + +LD+L K A+ LFD R FTP+
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPN 296
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
++TYT ++N +CR+ +L EA ++ DM G+KPD++ + V+L G ++ D I ++
Sbjct: 297 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK-LF 355
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
MK +V Y+++I K + E AI F+DM+D GL+PD YT +I+ + +
Sbjct: 356 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 415
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAV 435
+ ELL EM KG P +A+
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 165/417 (39%), Gaps = 65/417 (15%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ G D YN + L K + + + + EE+ K + L ++ +T +K +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 244
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A +F MK FK + T N L +
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSL------------------------------- 273
Query: 135 IEGLCSVGKVGEAEAHFNRLQDK---SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
G +GK EA+ F++L+++ ++ Y+ ++NG+C N + E
Sbjct: 274 --GRAKLGK--EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN-------------LIEA 316
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
D+++ K DI + L + D A+KL M+S P
Sbjct: 317 ARIWNDMIDHGL--------KPDIVAHNVMLEGLLRSMKKSD---AIKLFHVMKSKGPCP 365
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ Y+I++ C + A FD V G PD YT +I + L +L
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
++M+ +G PD TY L+ N + I+ M Q EI + +++++
Sbjct: 426 KEMQEKGHPPDGKTYNALI-KLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TP 427
NYE ++++MI KG+ PD +YT +I +G +EA L+EM KGM TP
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 541
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
LL C V ++ +A ++ M ++P + ++++L+ L K A LF +G
Sbjct: 303 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 362
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
P+V +YT MI +C+ +S++ A++ F DM G++PD YT L+ G F LD +
Sbjct: 363 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG-FGTQKKLDTV 421
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ ++M++ D Y+ LI + E R++ MI +EP T+ ++
Sbjct: 422 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 481
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSIL 440
Y+ + + DEM KG+ P + + + R ++
Sbjct: 482 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 35/307 (11%)
Query: 27 NIVFDAL--CKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
N + D+L KLGK +A + ++L+ + ++ YT L+ G+C NLI+A ++N+M
Sbjct: 267 NCLLDSLGRAKLGK--EAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+ G KPDIV +NV+ G+ R+ + AI F M+S G PN ++ ++I C +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 145 GEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
A +F+ + D ++ +Y+ ++ G +G K K+D V
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITG----------FGTQK-----------KLDTV- 421
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLNVEPSQIMYSIV 259
YEL E+ KG + + L KL + + ++ M +EPS ++++
Sbjct: 422 --YELLKEMQEKGH-PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 478
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ + + R+++D + +G PD +YT +I +EA ++M +G+
Sbjct: 479 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 538
Query: 320 KPDVITY 326
K +I Y
Sbjct: 539 KTPLIDY 545
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 229 CLVGDIGKAMKLLETMRSL------NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
CL+ +G+A KL + + L P+ + Y+++L+ C V A +++ +
Sbjct: 268 CLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 326
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PD+V + M+ R +A+ LF MK +G P+V +YT+++ F ++++
Sbjct: 327 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR-DFCKQSSMET 385
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ DM + + D Y+ LI G + L ++M +KG PD TY +I
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
L + + + + + ++M + PS H + + +S AR
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 486
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 39/193 (20%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD + F K G + +Y I+ CK ++ AIE +++ + D YT L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL------------------------- 99
I G+ Q L + + EM+ KG PD TYN L
Sbjct: 409 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 468
Query: 100 ------------AAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA 147
+ V RN E A+ +DEM G+ P+ ++ ++I GL S GK EA
Sbjct: 469 EPSIHTFNMIMKSYFVARNYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREA 526
Query: 148 EAHFNRLQDKSVE 160
+ + DK ++
Sbjct: 527 CRYLEEMLDKGMK 539
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 268 KTKHAR-SLFDSFVG----RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
+ +HAR F F +GF D TY +M++ + + + + ++M +G+
Sbjct: 169 RFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-T 227
Query: 323 VITYTVL------------------LYGSFKNAAALDVINTIWRDM------KQTEISLD 358
+ T+T+ L +K ++ IN + + K+ ++ D
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 287
Query: 359 ---------VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
++ Y+VL+NG + N +A R++ DMID GL+PD V + M+ +
Sbjct: 288 KLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 410 MKEASELLDEMSSKGMTPS 428
+A +L M SKG P+
Sbjct: 348 KSDAIKLFHVMKSKGPCPN 366
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 2/200 (1%)
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
KA+ + E M+ + + +LD+L K A+ LFD R FTP+++TYT ++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLL 305
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N +CR+ +L EA ++ DM G+KPD++ + V+L G ++ D I ++ MK
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK-LFHVMKSKGP 364
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+V Y+++I K + E AI F+DM+D GL+PD YT +I+ + + + E
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 416 LLDEMSSKGMTPSSHIISAV 435
LL EM KG P +A+
Sbjct: 425 LLKEMQEKGHPPDGKTYNAL 444
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 162/406 (39%), Gaps = 65/406 (16%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN + L K + + + + EE+ K + L ++ +T +K + A +F MK
Sbjct: 198 YNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMK 256
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
FK + T N L + G +GK
Sbjct: 257 KYKFKIGVETINCLLDSL---------------------------------GRAKLGK-- 281
Query: 146 EAEAHFNRLQDK---SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
EA+ F++L+++ ++ Y+ ++NG+C N + E D+++
Sbjct: 282 EAQVLFDKLKERFTPNMMTYTVLLNGWCRVRN-------------LIEAARIWNDMIDHG 328
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
K DI + L + D A+KL M+S P+ Y+I++
Sbjct: 329 L--------KPDIVAHNVMLEGLLRSMKKSD---AIKLFHVMKSKGPCPNVRSYTIMIRD 377
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
C + A FD V G PD YT +I + L +L ++M+ +G PD
Sbjct: 378 FCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPD 437
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
TY L+ N + I+ M Q EI + +++++ NYE ++
Sbjct: 438 GKTYNALI-KLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVW 496
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TP 427
++MI KG+ PD +YT +I +G +EA L+EM KGM TP
Sbjct: 497 DEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTP 542
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
LL C V ++ +A ++ M ++P + ++++L+ L K A LF +G
Sbjct: 304 LLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKG 363
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
P+V +YT MI +C+ +S++ A++ F DM G++PD YT L+ G F LD +
Sbjct: 364 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG-FGTQKKLDTV 422
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ ++M++ D Y+ LI + E R++ MI +EP T+ ++
Sbjct: 423 YELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKS 482
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSIL 440
Y+ + + DEM KG+ P + + + R ++
Sbjct: 483 YFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 145/307 (47%), Gaps = 35/307 (11%)
Query: 27 NIVFDAL--CKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
N + D+L KLGK +A + ++L+ + ++ YT L+ G+C NLI+A ++N+M
Sbjct: 268 NCLLDSLGRAKLGK--EAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+ G KPDIV +NV+ G+ R+ + AI F M+S G PN ++ ++I C +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 145 GEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
A +F+ + D ++ +Y+ ++ G +G K K+D V
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITG----------FGTQK-----------KLDTV- 422
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLNVEPSQIMYSIV 259
YEL E+ KG + + L KL + + ++ M +EPS ++++
Sbjct: 423 --YELLKEMQEKGH-PPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMI 479
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ + + R+++D + +G PD +YT +I +EA ++M +G+
Sbjct: 480 MKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGM 539
Query: 320 KPDVITY 326
K +I Y
Sbjct: 540 KTPLIDY 546
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 8/221 (3%)
Query: 229 CLVGDIGKAMKLLETMRSL------NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
CL+ +G+A KL + + L P+ + Y+++L+ C V A +++ +
Sbjct: 269 CLLDSLGRA-KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH 327
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
G PD+V + M+ R +A+ LF MK +G P+V +YT+++ F ++++
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIR-DFCKQSSMET 386
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ DM + + D Y+ LI G + L ++M +KG PD TY +I
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
L + + + + + ++M + PS H + + +S AR
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ D VA+N++ + L + K DAI++ ++ K +++ YT +I+ +C Q ++ A
Sbjct: 328 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F++M + G +PD Y L G + EM+ G P+ T+ +I+
Sbjct: 388 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 447
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
+ + ++ + IY+ M+ E S + N
Sbjct: 448 MAN-----------QKMPEHGTRIYNKMIQNEIEPSIHTFN 477
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 77/193 (39%), Gaps = 39/193 (20%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
SD + F K G + +Y I+ CK ++ AIE +++ + D YT L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL------------------------- 99
I G+ Q L + + EM+ KG PD TYN L
Sbjct: 410 ITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEI 469
Query: 100 ------------AAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA 147
+ V RN E A+ +DEM G+ P+ ++ ++I GL S GK EA
Sbjct: 470 EPSIHTFNMIMKSYFVARNYEMGRAV--WDEMIKKGICPDDNSYTVLIRGLISEGKSREA 527
Query: 148 EAHFNRLQDKSVE 160
+ + DK ++
Sbjct: 528 CRYLEEMLDKGMK 540
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 22/351 (6%)
Query: 26 YNIVFDALCKLGKVDDAIEMREEL-RVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
+ DA C+ K+D A+ + + R+ + ++ Y T++ GY G++ A + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+ KPD+ T+N+L G CR+ + +A++ F EM+ G EPN + +I G S GK+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
E ++ + +E+ CE I G C+ V+ A
Sbjct: 280 EEGV----KMAYEMIELGCRFSEATCE----------------ILVDGLCREGRVDDACG 319
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
L L+L NK + E L+ KLC +AM+++E + P I + +++ L
Sbjct: 320 LVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLR 379
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G+T+ A + + G PD VT+ ++ C + +A L +G +PD
Sbjct: 380 KSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDET 439
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
TY VL+ G F + +M ++ D+ Y+ L++GL T +
Sbjct: 440 TYHVLVSG-FTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKF 489
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 142/330 (43%), Gaps = 32/330 (9%)
Query: 104 CRNDEARVAINNFDEMES--DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE- 160
CR + A+ FD M+ DG +PN + ++ G G + +A + R+ + +
Sbjct: 168 CRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKP 226
Query: 161 ---IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAK 217
++ ++NGYC +S K DL A +LF E+ KG
Sbjct: 227 DVCTFNILINGYCRSS---------------------KFDL---ALDLFREMKEKGCEPN 262
Query: 218 EESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
S L+ G I + +K+ M L S+ I++D LC G+ A L
Sbjct: 263 VVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVL 322
Query: 278 SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
+ + P Y +++ C N A+++ +++ ++G P I T L+ G + +
Sbjct: 323 DLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG-LRKS 381
Query: 338 AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
+ + M I D V +++L+ L +D+ DA RL KG EPD+ TY
Sbjct: 382 GRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTY 441
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTP 427
++S + K+G KE L++EM K M P
Sbjct: 442 HVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 94/180 (52%), Gaps = 8/180 (4%)
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFV----GRGFTPDVVTYTTMINSYCRMNSLKEAL 308
+ ++ +DA C K +A FD+ G+ P+V Y T++N Y + + +AL
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKAL 213
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+Q M + KPDV T+ +L+ G + ++ D+ ++R+MK+ +VV ++ LI G
Sbjct: 214 RFYQRMGKERAKPDVCTFNILING-YCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ + E+ +++ +MI+ G + T ++ ++G + +A L+ ++ +K + PS
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 35/236 (14%)
Query: 229 CLVGDIGKAMKLLETMRSL-NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
C + A+ +TM+ L + +P+ +Y+ V++ G A + PD
Sbjct: 168 CRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPD 227
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA-------AL 340
V T+ +IN YCR + ALDLF++MK +G +P+V+++ L+ G + A
Sbjct: 228 VCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAY 287
Query: 341 DVINTIWRDMKQT-EISLDVVC--------------------------YSVLINGLMKTD 373
++I R + T EI +D +C Y L+ L +
Sbjct: 288 EMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGEN 347
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
A+ + E++ KG P + T ++ K G ++AS +++M + G+ P S
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS 403
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 121/311 (38%), Gaps = 55/311 (17%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D +NI+ + C+ K D A+++ E++ K + ++ + TLI+G+ G + + M
Sbjct: 227 DVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMA 286
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
EM G + T +L G+CR A ++ + V P+ + ++E LC
Sbjct: 287 YEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC-- 344
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
G++K+ V +E
Sbjct: 345 --------------------------------------GENKA-----------VRAMEM 355
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
EL+ KG +C L+ L G KA +E M + + P + ++++L
Sbjct: 356 MEELW----KKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
LC + A L +G+ PD TY +++ + + KE L +M + + P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 322 DVITYTVLLYG 332
D+ TY L+ G
Sbjct: 472 DIFTYNRLMDG 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 68/180 (37%), Gaps = 35/180 (19%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDD------------------------------- 41
E E G I+ D LC+ G+VDD
Sbjct: 288 EMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGEN 347
Query: 42 ----AIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYN 97
A+EM EEL K TTL++G G A +M N G PD VT+N
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 98 VLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
+L +C +D + A S G EP+ TT+ +++ G G+ E E N + DK
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 191/419 (45%), Gaps = 30/419 (7%)
Query: 22 DGVAYNIVFDALCK---LGKVDDAIEMREELRVKNI-DLDIKHYTTLIKGYCLQGNLIDA 77
G+ ++V L + L K + E+ E LR +N + + LI Y GN A
Sbjct: 99 QGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGA 158
Query: 78 FYMFNEMKNKGFKPDIVTYNVL-----AAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ + + G P++++Y L G C N EA F M+S G EP++ T++
Sbjct: 159 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEA-----IFRRMQSSGPEPSAITYQ 213
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKS-------VEIYSAMVNGYCEASNNNNNYGDDKS- 184
+I++ K EAE F L D+ ++Y M+ Y +A N S
Sbjct: 214 IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSM 273
Query: 185 ---PTPISEVGYCKVDLVEKAYELFLELSN---KGDIAKEESCFKLLTK-LCLVGDIGKA 237
P S V Y + E +Y+ ++ + + DI + + LL K +A
Sbjct: 274 VGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEA 333
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+ + E M V P+ Y+I+LDA G + A+++F S PD+ +YTTM+++
Sbjct: 334 LSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
Y + ++ A F+ +K G +P+++TY L+ G + A ++ + ++ M+ + I
Sbjct: 394 YVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG-YAKANDVEKMMEVYEKMRLSGIKA 452
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+ + +++ + N+ A+ +++M G+ PD+ ++SL + ++EA EL
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
Y K+ A + LS G S L+ G A + M+S E
Sbjct: 147 TAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE 206
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGR---GFTPDVVTYTTMINSYCRMNSLKEA 307
PS I Y I+L K K A +F++ + PD Y MI Y + + ++A
Sbjct: 207 PSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+F M +G+ +TY L+ SF+ + ++ I+ M++++I DVV Y++LI
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLM--SFETS--YKEVSKIYDQMQRSDIQPDVVSYALLIK 322
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ E+A+ +FE+M+D G+ P Y ++ + G++++A + M + P
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFP 382
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 58/307 (18%)
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G PN ++ ++E GK AEA F R+Q E
Sbjct: 169 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE---------------------- 206
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKE-ESCFKLLTKLCLVGDIGKAMKLL 241
P+ I+ Y++ L+ +GD KE E F+ L L
Sbjct: 207 --PSAIT-------------YQIILKTFVEGDKFKEAEEVFETL---------------L 236
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ +S ++P Q MY +++ G + AR +F S VG+G VTY ++++
Sbjct: 237 DEKKS-PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET-- 293
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
S KE ++ M+R I+PDV++Y +L+ ++ A + +++ +M +
Sbjct: 294 -SYKEVSKIYDQMQRSDIQPDVVSYALLI-KAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y++L++ + E A +F+ M + PD +YT M+S Y M+ A + +
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 422 SKGMTPS 428
G P+
Sbjct: 412 VDGFEPN 418
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ + + F+E ++G+ AYNI+ DA G V+ A + + +R I D+ YTT
Sbjct: 330 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 389
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
++ Y ++ A F +K GF+P+IVTY L G + ++ + +++M G
Sbjct: 390 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 449
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
++ N T I++ G A + ++
Sbjct: 450 IKANQTILTTIMDASGRCKNFGSALGWYKEME 481
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM FK + +F D +Y + A ++ A + + ++V + +I Y
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPD--IVTYNVLAAGVCRNDEARVAINNFDEM 119
TLIKGY ++ ++ +M+ G K + I+T + A+G C+N + A+ + EM
Sbjct: 423 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS--ALGWYKEM 480
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
ES GV P+ +++ + ++ EA+
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAK 509
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 190/416 (45%), Gaps = 24/416 (5%)
Query: 22 DGVAYNIVFDALCK---LGKVDDAIEMREELRVKNI-DLDIKHYTTLIKGYCLQGNLIDA 77
G+ ++V L + L K + E+ E LR +N + + LI Y GN A
Sbjct: 106 QGLPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGA 165
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
+ + + G P++++Y L R + A F M+S G EP++ T+++I++
Sbjct: 166 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 225
Query: 138 LCSVGKVGEAEAHFNRLQDKS-------VEIYSAMVNGYCEASNNNNNYGDDKS----PT 186
K EAE F L D+ ++Y M+ Y +A N S
Sbjct: 226 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
Query: 187 PISEVGYCKVDLVEKAYELFLELSN---KGDIAKEESCFKLLTKLCLVGDIGK---AMKL 240
P S V Y + E +Y+ ++ + + DI + + LL K G + A+ +
Sbjct: 286 PQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKA--YGRARREEEALSV 343
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E M V P+ Y+I+LDA G + A+++F S PD+ +YTTM+++Y
Sbjct: 344 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 403
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ ++ A F+ +K G +P+++TY L+ G + A ++ + ++ M+ + I +
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG-YAKANDVEKMMEVYEKMRLSGIKANQT 462
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+ +++ + N+ A+ +++M G+ PD+ ++SL + ++EA EL
Sbjct: 463 ILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR---GFTPDV 288
G A + M+S EPS I Y I+L K K A +F++ + PD
Sbjct: 195 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 254
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
Y MI Y + + ++A +F M +G+ +TY L+ SF+ + ++ I+
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM--SFETS--YKEVSKIYD 310
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
M++++I DVV Y++LI + E+A+ +FE+M+D G+ P Y ++ + G
Sbjct: 311 QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISG 370
Query: 409 LMKEASELLDEMSSKGMTP 427
++++A + M + P
Sbjct: 371 MVEQAKTVFKSMRRDRIFP 389
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 133/325 (40%), Gaps = 58/325 (17%)
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G PN ++ ++E GK AEA F R+Q E
Sbjct: 176 GSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPE---------------------- 213
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKE-ESCFKLLTKLCLVGDIGKAMKLL 241
P+ I+ Y++ L+ +GD KE E F+ LL
Sbjct: 214 --PSAIT-------------YQIILKTFVEGDKFKEAEEVFE---------------TLL 243
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ +S ++P Q MY +++ G + AR +F S VG+G VTY ++++
Sbjct: 244 DEKKS-PLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFET-- 300
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
S KE ++ M+R I+PDV++Y +L+ ++ A + +++ +M +
Sbjct: 301 -SYKEVSKIYDQMQRSDIQPDVVSYALLI-KAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y++L++ + E A +F+ M + PD +YT M+S Y M+ A + +
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Query: 422 SKGMTPSSHIISAVNRSILKARKVQ 446
G P+ + + KA V+
Sbjct: 419 VDGFEPNIVTYGTLIKGYAKANDVE 443
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTT 63
+ + + F+E ++G+ AYNI+ DA G V+ A + + +R I D+ YTT
Sbjct: 337 EEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTT 396
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
++ Y ++ A F +K GF+P+IVTY L G + ++ + +++M G
Sbjct: 397 MLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSG 456
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
++ N T I++ G A + ++
Sbjct: 457 IKANQTILTTIMDASGRCKNFGSALGWYKEME 488
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM FK + +F D +Y + A ++ A + + ++V + +I Y
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPD--IVTYNVLAAGVCRNDEARVAINNFDEM 119
TLIKGY ++ ++ +M+ G K + I+T + A+G C+N + A+ + EM
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGS--ALGWYKEM 487
Query: 120 ESDGVEPNSTTHKMII 135
ES GV P+ +++
Sbjct: 488 ESCGVPPDQKAKNVLL 503
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 212/544 (38%), Gaps = 111/544 (20%)
Query: 10 KFKEFKESGMFLDGVAYNIVFDAL-------CKLGKVDDAIEMREELRVKNIDLDIKHYT 62
+F F SG D N++ L LG + I ++E + +Y
Sbjct: 112 RFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPS-----LTNYN 166
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
L+ C +IDA + +M+N+G PD+VT+ L G C E VA FDEM
Sbjct: 167 RLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVC 226
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEA---------------------------------EA 149
G+ PNS T ++I G + V E
Sbjct: 227 GIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREG 286
Query: 150 HFNRLQD--------KSVEI---YSAMVNGYCEASNNNN---------NYGDDKSPTPIS 189
+FN + + +SV + Y M++ C N+ + G T +
Sbjct: 287 YFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYN 346
Query: 190 EV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETM-- 244
+ G CK +AY+L LE ++ + E +KLL + LC D GKA +LE M
Sbjct: 347 AIIHGLCKDGGCMRAYQL-LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 245 --------------RSLNV-------------------EPSQIMYSIVLDALCHVGKTKH 271
R L V P + + V++ LC +G+
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 272 ARSLFDSFV-GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD-MKRRGIKPDVITYTVL 329
A + D + G+ PD VT T++ +EALD+ M IKP V+ Y +
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 330 LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
+ G FK D +++ +++ ++ D Y+++I+GL T+ + A + ++D+I
Sbjct: 526 IRGLFKLHKG-DEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPS 584
Query: 390 LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS----SHIISAVNRSILKARKV 445
D Y + + G + +A L +++ G P+ + +I+ +RS LK
Sbjct: 585 GRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAY 644
Query: 446 QFHE 449
Q E
Sbjct: 645 QILE 648
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 179/422 (42%), Gaps = 35/422 (8%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRV-KNIDLDIKHYTTLIKGYCLQGNL 74
E+ + A+ + D++C+ G +D E+ E + + ++++++ Y +I C
Sbjct: 265 ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA-YGHMIDSLCRYRRN 323
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A + MK+KG KP +YN + G+C++ A +E P+ T+K++
Sbjct: 324 HGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLL 383
Query: 135 IEGLCSVGKVGEA----EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+E LC G+A E + IY+ + G C N PT I
Sbjct: 384 MESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN----------PTEILN 433
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLN- 248
V LV +GD +E ++ LC +G + AMK+L+ M +
Sbjct: 434 V------LVSML---------QGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG-FTPDVVTYTTMINSYCRMNSLKEA 307
P + + V+ L G+ + A + + + P VV Y +I +++ EA
Sbjct: 479 CAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEA 538
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+ +F +++ + D TY +++ G +D+ W D+ D Y+ +
Sbjct: 539 MSVFGQLEKASVTADSTTYAIIIDG-LCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLK 597
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
GL ++ DA D+ D G P+ V Y +I+ + GL +EA ++L+EM G P
Sbjct: 598 GLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Query: 428 SS 429
+
Sbjct: 658 DA 659
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 41/289 (14%)
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE--P 251
C ++A+ FL G I E +C ++ +L + ++ + E P
Sbjct: 101 CDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVP 160
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
S Y+ +++ LC + + A L RG PDVVT+TT+I YC + L+ A +F
Sbjct: 161 SLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVF 220
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMK-QTEISLDVVCYSVLIN 367
+M+ GI+P+ +T +VL+ G K ++ +W MK +T+ S+ ++ L++
Sbjct: 221 DEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVD 280
Query: 368 GLMKTDNYEDAIRLFED---------------MID--------------------KGLEP 392
+ + + D + E+ MID KGL+P
Sbjct: 281 SMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKP 340
Query: 393 DKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
+ +Y +I K G A +LL+E S PS + + S+ K
Sbjct: 341 RRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 131/328 (39%), Gaps = 36/328 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCK---LGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
+E E F Y ++ ++LCK GK + +E+ LR + D + Y ++G
Sbjct: 365 LEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELM--LRKEGAD-RTRIYNIYLRG 421
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG-VEP 126
C+ N + + M +PD T N + G+C+ A+ D+M + P
Sbjct: 422 LCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS-----VEIYSAMVNGYCEASNNNNNYGD 181
++ T ++ GL + G+ EA NR+ ++ V Y+A++ G + GD
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK-----GD 536
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+ A +F +L A + ++ LC+ + A K
Sbjct: 537 E-------------------AMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + + +Y+ L LC G A G P+VV Y T+I R
Sbjct: 578 DDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRS 637
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVL 329
+EA + ++M++ G PD +T+ +L
Sbjct: 638 GLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 184/464 (39%), Gaps = 60/464 (12%)
Query: 40 DDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL 99
D+A+ + + L ++ D + +++I C G +A F GF PD T NV+
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 100 AAGVCRNDEARVAINNFDEMESDGVE--PNSTTHKMIIEGLCSVGKVGEAEAHF----NR 153
A + + + + E P+ T + ++ LC++ +V +A NR
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR 191
Query: 154 LQDKSVEIYSAMVNGYCEASNNNNNY---------GDDKSPTPISEV--GYCKVDLVEKA 202
V ++ ++ GYCE + G + +S + G+ K+ VE
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 203 YELFLEL----SNKGDIAKEESCF-KLLTKLCLVG------DIGKAMKLLET-------- 243
+L EL N+ D + + + F L+ +C G +I + M L E+
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 244 ---------------------MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
M+S ++P + Y+ ++ LC G A L +
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
F P TY ++ S C+ +A ++ + M R+ Y + L G ++
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI-DKGLEPDKVTYTDMI 401
+N + M Q + D + +INGL K +DA+++ +DM+ K PD VT ++
Sbjct: 432 LNVLV-SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVM 490
Query: 402 SLYYKKGLMKEASELLDE-MSSKGMTPSSHIISAVNRSILKARK 444
+G +EA ++L+ M + P +AV R + K K
Sbjct: 491 CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHK 534
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 260 LDALCHVGKTK-HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
+ ++C V + A + D RG+ PD + +++I+S C EA F G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMK-QTEISLDVVCYSVLINGLMKTDNYED 377
PD T V++ + + + + I R + + E + Y+ L+N L D
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID 180
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A +L DM ++G PD VT+T +I Y + ++ A ++ DEM G+ P+S +S +
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 438 SILKARKVQ 446
LK R V+
Sbjct: 241 GFLKMRDVE 249
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 168/403 (41%), Gaps = 32/403 (7%)
Query: 33 LCK-LGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKP 91
+C+ L D +E L + + +++ +QGN + F+ + +N G+K
Sbjct: 618 ICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN-GYKH 676
Query: 92 DIVTYNV-LAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
+ YN+ + C D ++ + F EM G T ++I G A
Sbjct: 677 NSEAYNMSIKVAGCGKDFKQMR-SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRT 735
Query: 151 FNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
F ++D S + ++ CE N VE+A F
Sbjct: 736 FKEMKDMGLIPSSSTFKCLITVLCEKKGRN----------------------VEEATRTF 773
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
E+ G + E L LC VG+ A L+++ + P + YSI + ALC +
Sbjct: 774 REMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRI 832
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
GK + A S SF G D TY ++++ + L++ALD MK G KP V Y
Sbjct: 833 GKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVY 892
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
T L+ FK V+ T + M+ VV Y+ +I G M E+A F +M
Sbjct: 893 TSLIVYFFKEKQLEKVLETC-QKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNME 951
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
++G PD TY+ I+ + ++A +LL EM KG+ PS+
Sbjct: 952 ERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 172/399 (43%), Gaps = 25/399 (6%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN + + +D E+ E+ D DI+ +T LI Y + +F +M+
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
GF+ D YN++ +C +A+ + EM G+ T+KM+++ + KV
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
++ + D V I CE S ++ KS +C +++A EL
Sbjct: 312 VVQS----IADDMVRI--------CEISEHDAFGYLLKS--------FCVSGKIKEALEL 351
Query: 206 FLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
EL NK ++ + F++L K LC + A+++++ M+ ++ S + Y I++
Sbjct: 352 IRELKNK-EMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYL 409
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
A F+ G P V TYT ++ ++ ++ +LF +M GI+PD +
Sbjct: 410 RQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSV 469
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
T ++ G + ++ M++ I YS+ + L ++ Y++ I++F
Sbjct: 470 AITAVVAGHLGQNRVAEAWK-VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQ 528
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
M + ++ +IS K G KE L+ E+ +
Sbjct: 529 MHASKIVIRDDIFSWVISSMEKNG-EKEKIHLIKEIQKR 566
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 210/499 (42%), Gaps = 59/499 (11%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ +E K M LD + I+ LC+ ++ DA+E+ + ++ + +D D Y
Sbjct: 343 GKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVY 401
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+I GY Q ++ A F +K G P + TY + + + + N F+EM
Sbjct: 402 GIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIE 461
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNN-- 175
+G+EP+S ++ G +V EA F+ +++K ++ YS V C +S
Sbjct: 462 NGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDE 521
Query: 176 -----NNNYG------DDKSPTPISEVGYC----KVDLVEK------AYELFLELSNKGD 214
N + DD IS + K+ L+++ +Y L S K +
Sbjct: 522 IIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAE 581
Query: 215 IAKEE------SCFKLLTKLCLVG--------DIGKAMKLLETMRSLN-----VEPSQIM 255
++EE +C +L+ + L D+ + ++L + R +E S +
Sbjct: 582 FSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQ 641
Query: 256 YS--IVLDALCHVGKTKHARSLFDSFVGR--GFTPDVVTYTTMINSYCRMNSLKEALDLF 311
++ +V++ L H +A F S+VG+ G+ + Y I K+ LF
Sbjct: 642 FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLF 701
Query: 312 QDMKRRG--IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+M+R+G I D ++ YG ++ +++MK + + LI L
Sbjct: 702 YEMRRQGCLITQDTWAIMIMQYG---RTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 370 M--KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
K N E+A R F +MI G PD+ D + + G K+A LD + G P
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-P 817
Query: 428 SSHIISAVNRSILKARKVQ 446
+ S R++ + K++
Sbjct: 818 VTVAYSIYIRALCRIGKLE 836
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 158/376 (42%), Gaps = 31/376 (8%)
Query: 6 DVVDKF-KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
D+VD+ E +++G D + I+ K K+ + + E++R +LD Y +
Sbjct: 206 DMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIM 265
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I+ C+ G A + EM KG + TY +L + ++++ V + D+M
Sbjct: 266 IRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICE 325
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYG 180
+++ C GK+ EA L++K + + + +V G C A N
Sbjct: 326 ISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRA----NRMV 381
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
D +++V+ L+ SN I +++ D+ KA++
Sbjct: 382 D-------------ALEIVDIMKRRKLDDSNVYGI--------IISGYLRQNDVSKALEQ 420
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E ++ P Y+ ++ L + + + +LF+ + G PD V T ++ +
Sbjct: 421 FEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLG 480
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
N + EA +F M+ +GIKP +Y++ + ++ D I I+ M ++I +
Sbjct: 481 QNRVAEAWKVFSSMEEKGIKPTWKSYSIFV-KELCRSSRYDEIIKIFNQMHASKIVIRDD 539
Query: 361 CYSVLINGLMKTDNYE 376
+S +I+ + K E
Sbjct: 540 IFSWVISSMEKNGEKE 555
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 122/304 (40%), Gaps = 51/304 (16%)
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+F EM+ +G T+ ++ R +AI F EM+ G+ P+S+T K +I LC
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 140 SV-GK-VGEAEAHFNRLQDKSVEIYSAMVNGY----CEASNNNN------NYGDDKSPTP 187
G+ V EA F + +V Y CE N + + G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVT 819
Query: 188 ISEVGY----CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM----- 238
++ Y C++ +E+A + + + + ++ L GD+ KA+
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 239 ---------------------------KLLET---MRSLNVEPSQIMYSIVLDALCHVGK 268
K+LET M + EPS + Y+ ++ +GK
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTV 328
+ A + F + RG +PD TY+ IN C+ ++AL L +M +GI P I +
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 329 LLYG 332
+ YG
Sbjct: 1000 VFYG 1003
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
VAY+I ALC++GK+++A+ + LD Y +++ G +G+L A N
Sbjct: 820 VAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNS 879
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
MK G KP + Y L + + + +ME + EP+ T+ +I G S+GK
Sbjct: 880 MKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGK 939
Query: 144 VGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNN 177
V EA F ++++ + YS +N C+A + +
Sbjct: 940 VEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSED 977
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
IGK + + E MR E Y+I++ +LC G+ A + + +G T + TY
Sbjct: 240 IGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKM 299
Query: 294 MIN-----------------------------------SYCRMNSLKEALDLFQDMKRRG 318
+++ S+C +KEAL+L +++K +
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKE 359
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
+ D + +L+ G + +D + + D+ + D Y ++I+G ++ ++ A
Sbjct: 360 MCLDAKYFEILVKGLCRANRMVDALEIV--DIMKRRKLDDSNVYGIIISGYLRQNDVSKA 417
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ FE + G P TYT+++ +K ++ L +EM G+ P S I+AV
Sbjct: 418 LEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAV 474
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
+DK KE G Y + K +++ +E +++ ++ + + YT +I G
Sbjct: 874 LDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICG 933
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
Y G + +A+ F M+ +G PD TY+ +C+ ++ A+ EM G+ P+
Sbjct: 934 YMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPS 993
Query: 128 STTHKMIIEGLCSVGK 143
+ + + GL GK
Sbjct: 994 TINFRTVFYGLNREGK 1009
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 164/378 (43%), Gaps = 31/378 (8%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID--AFYMFNE 83
YN + + GK A E+ + +R + D+ + TLI G L A + +
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
++N G +PD +TYN L + R+ A+ F++ME+ +P+ T+ +I G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
EAE F L+ K + N A N EK
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERN--------------------TEKVK 387
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK---AMKLLETMRSLNVE-PSQIMYSIV 259
E++ ++ G K+E + T + + G G+ A++L + M+ L+ P I Y+++
Sbjct: 388 EVYQQMQKMG-FGKDEMTYN--TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVL 444
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+D+L +T A +L + G P + TY+ +I Y + +EA D F M R G
Sbjct: 445 IDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
KPD + Y+V+L + ++RDM + Y ++I GLMK + +D
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWG-LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Query: 380 RLFEDMIDK-GLEPDKVT 396
+ DM + G+ P +++
Sbjct: 564 KTIRDMEELCGMNPLEIS 581
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 2/192 (1%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+K+ E M + +P Y+ ++ G A LF +GF PD VTY +++
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ-TEI 355
++ R + ++ +++Q M++ G D +TY +++ + LD+ +++DMK +
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIH-MYGKQGQLDLALQLYKDMKGLSGR 434
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ D + Y+VLI+ L K + +A L +M+D G++P TY+ +I Y K G +EA +
Sbjct: 435 NPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAED 494
Query: 416 LLDEMSSKGMTP 427
M G P
Sbjct: 495 TFSCMLRSGTKP 506
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 160/385 (41%), Gaps = 21/385 (5%)
Query: 14 FKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGN 73
++SG D +N + A + G + A + + ++ L+ C+ G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
L + + + E+++ GFK + ++ R + M++ G P ++M
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY 193
+IE LC +V +AE + +++ + ++ A+ N + Y
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM--------------------Y 937
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
++ +K +++ + G E + L+ C + L++ MR+L ++P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
Y ++ A + A LF+ + +G D Y TM+ S +A L Q
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
MK GI+P + T +L+ S+ ++ + ++K TE+ L + YS +I+ +++
Sbjct: 1058 MKNAGIEPTLATMHLLMV-SYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYT 398
+Y I +M +GLEPD +T
Sbjct: 1117 DYNSGIERLLEMKKEGLEPDHRIWT 1141
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A++LL+ +R+ + P I Y+ +L A A +F+ PD+ TY MI+
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
Y R EA LF +++ +G PD +TY LLY +F + + +++ M++
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY-AFARERNTEKVKEVYQQMQKMGFG 399
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE---PDKVTYTDMISLYYKKGLMKEA 413
D + Y+ +I+ K + A++L++DM KGL PD +TYT +I K EA
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 414 SELLDEMSSKGMTPSSHIISAV 435
+ L+ EM G+ P+ SA+
Sbjct: 458 AALMSEMLDVGIKPTLQTYSAL 479
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/488 (20%), Positives = 207/488 (42%), Gaps = 68/488 (13%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
SG D + Y ++ D+L K + +A + E+ I ++ Y+ LI GY G +
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A F+ M G KPD + Y+V+ + R +E R A + +M SDG P+ T ++++I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 137 GLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYC----------------EASNNN 176
GL + + + +++ +EI S +V G C E N+
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDT 611
Query: 177 --------------------------NNYGDDKSPTPISEVGYCKVDLVEKAY-ELFLEL 209
+ G + T V +CKV+ + A E F +
Sbjct: 612 LLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADP 671
Query: 210 SNKGDIAKEESCFKLLTKLCLVGD-IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK 268
G + ++ L C+ + +A ++ +R E S+ + ++ C +G
Sbjct: 672 CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 731
Query: 269 TKHARSLFDSFVGRGF----TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
+ A + + +GF +P YT +I +Y + ++A + ++++ G PD+
Sbjct: 732 PETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLK 788
Query: 325 TYTVLLY-----GSFKNAAALDVINTIWRDMKQTEI-SLDVVCYSVLINGLMKTDNYEDA 378
T+ L+ G ++ A A + NT+ RD + S++++ +++ ++G + E+
Sbjct: 789 TWNSLMSAYAQCGCYERARA--IFNTMMRDGPSPTVESINILLHALCVDGRL-----EEL 841
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRS 438
+ E++ D G + K + M+ + + G + E ++ M + G P+ + +
Sbjct: 842 YVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 439 ILKARKVQ 446
+ K ++V+
Sbjct: 902 LCKGKRVR 909
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 239 KLLETMRSLNVE----PSQIMYSIVLDALCHVGKTKHARSLF---DSFVGRGFTPDVVTY 291
+ LE LN+ P+ M + +L L + A +F + VG V Y
Sbjct: 173 RALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVG----DRVQVY 228
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM- 350
M+ Y R +A +L M++RG PD+I++ L+ K+ + DM
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+ + + D + Y+ L++ + N + A+++FEDM +PD TY MIS+Y + GL
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 411 KEASELLDEMSSKGMTPSS 429
EA L E+ KG P +
Sbjct: 349 AEAERLFMELELKGFFPDA 367
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 159/399 (39%), Gaps = 63/399 (15%)
Query: 34 CKLGKVDDAIEMREELRVKNIDLDIKH-YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPD 92
CKLG + A ++ + K YT +I+ Y Q A + ++ G PD
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 93 IVTYNVL--AAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH 150
+ T+N L A C E AI F+ M DG P+ T
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAI--FNTMMRDG--PSPT--------------------- 821
Query: 151 FNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD-LVEKAYELFLEL 209
VE + +++ C VD +E+ Y + EL
Sbjct: 822 --------VESINILLHALC-------------------------VDGRLEELYVVVEEL 848
Query: 210 SNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKT 269
+ G + S +L G+I + K+ +M++ P+ +Y ++++ LC +
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRV 908
Query: 270 KHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
+ A + F ++ + +M+ Y + K+ + ++Q +K G++PD TY L
Sbjct: 909 RDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTL 968
Query: 330 LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
+ ++ + + + M+ + + Y LI+ K E A +LFE+++ KG
Sbjct: 969 IIMYCRDRRPEEGY-LLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Query: 390 LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L+ D+ Y M+ + G +A +LL M + G+ P+
Sbjct: 1028 LKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPT 1066
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 3/172 (1%)
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE--ALDLFQ 312
+Y+ ++ GK A+ L D+ RG PD++++ T+IN+ + L A++L
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
++ G++PD ITY LL ++ + LD ++ DM+ D+ Y+ +I+ +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRD-SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
+A RLF ++ KG PD VTY ++ + ++ ++ E+ +M G
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 133/326 (40%), Gaps = 21/326 (6%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ SG+ D + YN + A + +D A+++ E++ D+ Y +I Y G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
+A +F E++ KGF PD VTYN L R + +M+ G + T+ I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYC 194
I GK G+ D ++++Y M G + + Y I +G
Sbjct: 409 IH---MYGKQGQL--------DLALQLYKDM-KGLSGRNPDAITY-----TVLIDSLG-- 449
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
K + +A L E+ + G ++ L+ G +A M +P +
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
YS++LD L +T+ A L+ + G TP Y MI + N + +DM
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 315 KRR-GIKPDVITYTVLLYGSFKNAAA 339
+ G+ P I+ +VL+ G + AA
Sbjct: 570 EELCGMNPLEIS-SVLVKGECFDLAA 594
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 179/444 (40%), Gaps = 64/444 (14%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ ++ F E + G F D V YN + A + + E+ ++++ D Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKN-KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
T+I Y QG L A ++ +MK G PD +TY VL + + + A EM
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNN 176
G++P T+ +I G GK EAE F+ + + YS M++ +
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 177 NNYG-------DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
+G D +P+ Y L+ EL G + + S
Sbjct: 526 KAWGLYRDMISDGHTPS----------------YTLY-ELMILGLMKENRS--------- 559
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
DI K ++ +E + +N P +I S+++ C AR L + G+ +
Sbjct: 560 --DDIQKTIRDMEELCGMN--PLEI-SSVLVKGECF---DLAARQL-KVAITNGYELEND 610
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRR--GIKPDVITYTVLLYGSFKN-AAALDVINTI 346
T +++ SY EA +L + +K G K + ++L+ N +AALD
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYF-- 668
Query: 347 WRDMKQTEISLDVVC------YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
+ + C Y L++ + ++Y +A ++F D+ G E + M
Sbjct: 669 ------ADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSM 722
Query: 401 ISLYYKKGLMKEASELLDEMSSKG 424
+ +Y K G + A +++++ +KG
Sbjct: 723 VVVYCKLGFPETAHQVVNQAETKG 746
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 110/287 (38%), Gaps = 20/287 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ K +G Y ++ + LCK +V DA M E+ N +++ + +++K Y
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ ++ +K G +PD TYN L CR+ +M + G++P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+K +I + +AE F L K +++ + + + S ++ G D
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDS---GSDS------- 1049
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
KA +L + N G + L+ G+ +A K+L ++ VE
Sbjct: 1050 ----------KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVE 1099
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+ + YS V+DA G PD +T + +
Sbjct: 1100 LTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
V ++ KE+G+ D YN + C+ + ++ + +++R +D + Y +LI
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
+ Q L A +F E+ +KG K D Y+ + + A M++ G+EP
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNN 177
T +++ S G EAE + L+D VE+ YS++++ Y + + N+
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNS 1120
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 103/517 (19%), Positives = 192/517 (37%), Gaps = 99/517 (19%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + D F SG D +AY+++ D L + + A + ++ Y
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEAR---VAINNFD 117
+I G + D +M+ G P ++ +VL G C + AR VAI N
Sbjct: 547 ELMILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGECFDLAARQLKVAITNGY 605
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEAS 173
E+E+D T I+ S G+ EA L++ + I A++ +C+ +
Sbjct: 606 ELEND-------TLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVN 658
Query: 174 NNN---NNYGDDK--------SPTPISEVGYCKV--DLVEKAYELFLELSNKGDIAKEES 220
N + + Y D S T + +C V + +A ++F +L G A E
Sbjct: 659 NLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESV 718
Query: 221 CFKLLTKLCLVGDIGKAMKLLETMRSLNVE-PSQIMYSIVLDALCHVGKTKHARSLFDSF 279
C ++ C +G A +++ + MY+ +++A + A S+ +
Sbjct: 719 CKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNL 778
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG------- 332
G TPD+ T+ +++++Y + + A +F M R G P V + +LL+
Sbjct: 779 RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRL 838
Query: 333 ---------------------------SFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
+F A + + I+ MK + Y ++
Sbjct: 839 EELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMM 898
Query: 366 INGLMKTDNYEDA-----------------------------------IRLFEDMIDKGL 390
I L K DA +++++ + + GL
Sbjct: 899 IELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL 958
Query: 391 EPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
EPD+ TY +I +Y + +E L+ +M + G+ P
Sbjct: 959 EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 195/454 (42%), Gaps = 24/454 (5%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
D + + E + +G D + YN + D K KV +A ++ E++ + + Y LI
Sbjct: 342 DAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
G G F +F ++K KG D +T++++ +CR + A+ +EME+ G
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
+ T ++ G G+ E +++ ++ N EAS DK
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQ-SKDKDY 520
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK--------LLTKLCLVGDIGKA 237
TP+ +D++ + + G A+E S + + +L + K
Sbjct: 521 TPMFPSKGSFLDIMS-----MVGSEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKP 575
Query: 238 MKLLETMRSLNVEPSQI---MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT-- 292
+ L + + +P M + L G A LF+ F G G T D+ +YT
Sbjct: 576 LFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT-DLTSYTYN 634
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+M++S+ + + A + M D+ TY V++ G K A D+ + + + +
Sbjct: 635 SMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRA-DLASAVLDRLTK 693
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
LD+V Y+ LIN L K ++A +LF+ M G+ PD V+Y MI + K G +KE
Sbjct: 694 QGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKE 753
Query: 413 ASELLDEMSSKGMTP---SSHIISAVNRSILKAR 443
A + L M G P + I+ + + + KAR
Sbjct: 754 AYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKAR 787
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 173/415 (41%), Gaps = 17/415 (4%)
Query: 23 GVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFN 82
AY+ +F +C+ G + + ++ ++ ++LD L+ G A + +
Sbjct: 92 ATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM--ESDGVEPNSTTHKMIIEGLCS 140
M+ G + Y+ + + + E R+A++ ++ SD + T +I+ L
Sbjct: 152 YMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 141 VGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY-CKVDLV 199
V E R D E E + D I G+ C DL
Sbjct: 212 TVAVNELLVGLRR-ADMRSEFKRVF-----EKLKGMKRFKFDTWSYNICIHGFGCWGDL- 264
Query: 200 EKAYELFLELSNK----GDIAKEESCF--KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
+ A LF E+ + G + C L+ LCL G A+ + + ++ EP
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
Y I++ C + A ++ GF PD + Y +++ + + EA LF+
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M + G++ TY +L+ G F+N A + T++ D+K+ +D + +S++ L +
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRA-EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
E A++L E+M +G D VT + ++ ++K+G +L+ + + P+
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 186/455 (40%), Gaps = 47/455 (10%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA-----FY 79
A N F LC + V + + +++D + + + L+ N ID F+
Sbjct: 19 AKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFF 78
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+ G+K Y+ + VCR + M+ DGV + T K++++ L
Sbjct: 79 RWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLI 138
Query: 140 SVGKVGEAEAHFNRLQD------KSV--EIYSAMVNGY------------CEASNNNNNY 179
GK A + +++ SV + A+V + EAS+N+++
Sbjct: 139 RSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSD- 197
Query: 180 GDDKSPTPISE------------VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL-LT 226
DD I VG + D+ + +F +L + + + +
Sbjct: 198 -DDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIH 256
Query: 227 KLCLVGDIGKAMKLLETMRSLN------VEPSQIMYSIVLDALCHVGKTKHARSLFDSFV 280
GD+ A+ L + M+ + P Y+ ++ LC GK K A ++D
Sbjct: 257 GFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELK 316
Query: 281 GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAAL 340
G PD TY +I C+ + +A+ ++ +M+ G PD I Y LL G+ K
Sbjct: 317 VSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVT 376
Query: 341 DVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
+ ++ M Q + Y++LI+GL + E LF D+ KG D +T++ +
Sbjct: 377 EACQ-LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIV 435
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
++G ++ A +L++EM ++G + IS++
Sbjct: 436 GLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSL 470
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 136/316 (43%), Gaps = 42/316 (13%)
Query: 44 EMREELR--------VKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG------F 89
+MR E + +K D Y I G+ G+L A +F EMK + F
Sbjct: 226 DMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSF 285
Query: 90 KPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEA 149
PDI TYN L +C +A+ A+ +DE++ G EP+++T++++I+G C ++
Sbjct: 286 GPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRM----- 340
Query: 150 HFNRLQDKSVEIYSAM-VNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
D ++ IY M NG+ + N D G K V +A +LF +
Sbjct: 341 ------DDAMRIYGEMQYNGFVPDTIVYNCLLD----------GTLKARKVTEACQLFEK 384
Query: 209 LSNKGDIAKEESCFK---LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
+ +G A SC+ L+ L G L ++ I +SIV LC
Sbjct: 385 MVQEGVRA---SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCR 441
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
GK + A L + RGF+ D+VT ++++ + + L + ++ + P+V+
Sbjct: 442 EGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Query: 326 YTVLLYGSFKNAAALD 341
+ + S K + D
Sbjct: 502 WNAGVEASLKRPQSKD 517
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 171/421 (40%), Gaps = 46/421 (10%)
Query: 11 FKEFKE------SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
FKE KE S D YN + LC GK DA+ + +EL+V + D Y L
Sbjct: 271 FKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRIL 330
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I+G C + DA ++ EM+ GF PD + YN L G + + A F++M +GV
Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGV 390
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
+ T+ ++I+GL + G AEA F +C+ D
Sbjct: 391 RASCWTYNILIDGLF---RNGRAEAGFTL---------------FCDLKKKGQFV--DAI 430
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
I + C+ +E A +L E+ +G + LL G KL++ +
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
R N+ P+ + ++ ++A ++K + F +G D++ +M+ S S
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQSKD-KDYTPMFPSKGSFLDIM---SMVGSEDDGASA 546
Query: 305 KEALDLFQDMKRRGIKPDVITYTV----LLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+E + D D + + L+G + + ++ S DV
Sbjct: 547 EEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARG-----------QRVEAKPDSFDVD 595
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKGL-EPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ ++ + + A +LFE G+ + TY M+S + KKG + A +LD+
Sbjct: 596 MMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQ 655
Query: 420 M 420
M
Sbjct: 656 M 656
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA---------- 272
++ +C G +G+ LL +M+ V Q M I+LD+L GK + A
Sbjct: 97 QIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEEL 156
Query: 273 -----RSLFDSFV-------------------------------GR----GFTPDVVTYT 292
S++DS + GR + P V
Sbjct: 157 GDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVN 216
Query: 293 TMINSYCRMNSLKEALDLFQDMK-RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
++ R + E +F+ +K + K D +Y + ++G F LD +++++MK
Sbjct: 217 ELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHG-FGCWGDLDAALSLFKEMK 275
Query: 352 Q------TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+ + D+ Y+ LI+ L +DA+ +++++ G EPD TY +I
Sbjct: 276 ERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCC 335
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
K M +A + EM G P + + + + LKARKV
Sbjct: 336 KSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKV 375
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+S GY ++KA+ELF G + S L+ CL D+ A +L M
Sbjct: 165 VSHRGY-----LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+V P Y I++ C G+ A L D + +GF PD ++YTT++NS CR L+EA
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
L MK +G PD++ Y ++ G + A+D + DM S + V Y LI
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA-RKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
GL +++ + E+MI KG P ++ + G ++EA ++++ + G T
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + KA +L ++ R V P+ Y++++ A C A LF + R PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+I +CR + A++L DM +G PD ++YT LL + + + R MK
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR-MK 287
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ D+V Y+ +I G + D DA ++ +DM+ G P+ V+Y +I +G+
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 412 EASELLDEMSSKGMTP 427
E + L+EM SKG +P
Sbjct: 348 EGKKYLEEMISKGFSP 363
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + E + D +Y I+ C+ G+V+ A+E+ +++ K D YTTL+ C
Sbjct: 213 FGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCR 272
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ L +A+ + MK KG PD+V YN + G CR D A A D+M S+G PNS +
Sbjct: 273 KTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVS 332
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYC 170
++ +I GLC G E + + + K + + +V G+C
Sbjct: 333 YRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G D ++Y + ++LC+ ++ +A ++ +++K + D+ HY T+I G+C + +DA
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
+ ++M + G P+ V+Y L G+C +EM S G P+ + +++G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 138 LCSVGKVGEA 147
CS GKV EA
Sbjct: 375 FCSFGKVEEA 384
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 29/278 (10%)
Query: 27 NIVFDALCK-LGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
N + D L G + A E+ + R+ + + + Y L++ +CL +L A+ +F +M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML 217
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
+ PD+ +Y +L G CR + A+ D+M + G P+ ++ ++ LC ++
Sbjct: 218 ERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLR 277
Query: 146 EAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
EA R++ K Y+ M+ +G+C+ D
Sbjct: 278 EAYKLLCRMKLKGCNPDLVHYNTMI------------------------LGFCREDRAMD 313
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A ++ ++ + G S L+ LC G + K LE M S P + + ++
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
C GK + A + + + G T T+ +I C
Sbjct: 374 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 192/435 (44%), Gaps = 38/435 (8%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+S + L YN + D K G++ +A E + + + I + T+I Y G L
Sbjct: 291 DSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLG 350
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
+ + MK PD TYN+L + +N++ A F EM+ DG++P+ +++ ++
Sbjct: 351 EVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEA---------------SNNN 176
V EAE + D +VEI SA+ Y EA + N
Sbjct: 410 YAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM 469
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFL--ELSNKGDIAKEESCFKL--LTKLCLVG 232
++ G + E GY + +A +F+ + NK + + K ++K C
Sbjct: 470 SSEGYSANIDAYGERGY-----LSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSC--- 521
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
KA +L E+M S V P + Y+ ++ L R + G+ D + Y
Sbjct: 522 --EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC 579
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+I+S+ ++ L A +++++M I+PDV+ Y VL+ +F + + + MK+
Sbjct: 580 AVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLI-NAFADTGNVQQAMSYVEAMKE 638
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI---DKGLEPDKVTYTDMISLYYKKGL 409
I + V Y+ LI K ++A ++ ++ +K PD T MI+LY ++ +
Sbjct: 639 AGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSM 698
Query: 410 MKEASELLDEMSSKG 424
+++A + D M +G
Sbjct: 699 VRKAEAIFDSMKQRG 713
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 8/216 (3%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV------VT 290
A+ L M + ++P ++ IVL + + A F + D T
Sbjct: 241 ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT 300
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y TMI++Y + +KEA + F+ M GI P +T+ +++ + N L + ++ + M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIH-IYGNNGQLGEVTSLMKTM 359
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
K + D Y++LI+ K ++ E A F++M D GL+PD V+Y ++ + + ++
Sbjct: 360 K-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMV 418
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+EA L+ EM + + SA+ R ++A ++
Sbjct: 419 EEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLE 454
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 236 KAMKLLETMRSLNV-EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+A+++ E +S E + I Y+I+L L K ++ +SL+D + +G P TY T+
Sbjct: 169 RAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTL 228
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSFKNAAALDVINTIW---RD 349
I+ Y + AL M + G++PD +T ++L Y + + W +
Sbjct: 229 IDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDEN 288
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
+ + L Y+ +I+ K+ ++A F+ M+++G+ P VT+ MI +Y G
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQ 348
Query: 410 MKEASELLDEM 420
+ E + L+ M
Sbjct: 349 LGEVTSLMKTM 359
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 174/451 (38%), Gaps = 33/451 (7%)
Query: 7 VVDKFKEFKESGMF-LDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
V+ F+ FK G + L+ + YNI+ L K K + +E+ K I Y TLI
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF-----DEME 120
Y G + A +M G +PD VT ++ + E + A F DE +
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 121 SDG-VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY 179
+D V +S T+ +I+ G++ EA F R+ ++ + + N NN
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
G+ S ++ +C D + Y + + L K + DI +A
Sbjct: 350 GEVTSLMKTMKL-HCAPDT--RTYNILISLHTKNN------------------DIERAGA 388
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+ M+ ++P + Y +L A + A L D T + + Y
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV 448
Query: 300 RMNSLKEALDLFQDMKRRG-IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
L+++ F+ G + + + + YG + + + +++ +
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKR----T 504
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
V+ Y+V+I + + E A LFE M+ G+ PDK TY ++ + + + L+
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 419 EMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
+M G AV S +K ++ E
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 122/313 (38%), Gaps = 59/313 (18%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ +E+G D + Y V + KLG+++ A E+ +E+ NI+ D+ Y LI +
Sbjct: 563 LEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFAD 622
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GN+ A MK G + V YN L
Sbjct: 623 TGNVQQAMSYVEAMKEAGIPGNSVIYNSL------------------------------- 651
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
I+ VG + EAEA + +L S N Y D + +
Sbjct: 652 ----IKLYTKVGYLDEAEAIYRKLLQ----------------SCNKTQYPDVYTSNCMIN 691
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV---GDIGKAMKLLETMRSL 247
+ Y + +V KA +F + +G E + F LC+ G +A ++ + MR +
Sbjct: 692 L-YSERSMVRKAEAIFDSMKQRG----EANEFTFAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+ + Y+ VL G+ K A F V G PD T+ ++ ++ K+A
Sbjct: 747 KILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Query: 308 LDLFQDMKRRGIK 320
+ ++++++ IK
Sbjct: 807 VRKIEEIRKKEIK 819
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 136/310 (43%), Gaps = 33/310 (10%)
Query: 28 IVFDALCKLGKVDDAIEMREELRV---KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
++ DALCK G V +A E + N ++ + L+ G+ L A ++ EM
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
K KP +VTY L G CR ++A+ +EM+ +E N II+GL G++
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 145 GEAEAHFNRL----QDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK-VDLV 199
EA R ++ Y+++V +C+A GD + I ++ + VD
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKA-------GDLPGASKILKMMMTRGVDPT 389
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
Y F + +K + K E L KL G P ++ Y ++
Sbjct: 390 TTTYNHFFKYFSKHN--KTEEGMNLYFKLIEAGH----------------SPDRLTYHLI 431
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
L LC GK A + RG PD++T T +I+ CR+ L+EA + F + RRGI
Sbjct: 432 LKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 320 KPDVITYTVL 329
P IT+ ++
Sbjct: 492 IPQYITFKMI 501
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 15/248 (6%)
Query: 194 CKVDLVEKAYELFLEL--SNKG-DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
CK E A+ L + S++G ++ ++ L+ + G + +A++ E RS E
Sbjct: 146 CKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS--YE 203
Query: 251 P------SQIMYSIVLDALCHVGKTKHARSLFDSFVG---RGFTPDVVTYTTMINSYCRM 301
P + ++LDALC G + A + G + P V + ++N + R
Sbjct: 204 PVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRS 263
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
LK+A L+++MK +KP V+TY L+ G + + + + +MK E+ ++ +
Sbjct: 264 RKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG-YCRMRRVQIAMEVLEEMKMAEMEINFMV 322
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
++ +I+GL + +A+ + E P VTY ++ + K G + AS++L M
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 422 SKGMTPSS 429
++G+ P++
Sbjct: 383 TRGVDPTT 390
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 155/354 (43%), Gaps = 31/354 (8%)
Query: 95 TYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH----KMIIEGLCSVGKVGEAEAH 150
T+ VL R + AI F+ S S T +++++ LC G V EA +
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 151 FNRLQD-------KSVEIYSAMVNGYCEASNNNNN---YGDDKS----PTPISE----VG 192
R+ SV I++ ++NG+ + + + K+ PT ++ G
Sbjct: 235 LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCF----KLLTKLCLVGDIGKAMKLLETMRSLN 248
YC++ V+ A E+ E+ +A+ E F ++ L G + +A+ ++E
Sbjct: 295 YCRMRRVQIAMEVLEEMK----MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 350
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
P+ + Y+ ++ C G A + + RG P TY + + N +E +
Sbjct: 351 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 410
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
+L+ + G PD +TY ++L ++ L + + ++MK I D++ ++LI+
Sbjct: 411 NLYFKLIEAGHSPDRLTYHLILKMLCED-GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHL 469
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
L + + E+A F++ + +G+ P +T+ + + KG+ A L MSS
Sbjct: 470 LCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSS 523
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 107/243 (44%), Gaps = 10/243 (4%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT----KLCLVGDIGKAMKLLE----TM 244
Y + +V++A F + + K + +LL LC G + +A LE TM
Sbjct: 183 YARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTM 242
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
S N PS +++I+L+ K K A L++ P VVTY T+I YCRM +
Sbjct: 243 DS-NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRV 301
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSV 364
+ A+++ ++MK ++ + + + ++ G A L + E +V Y+
Sbjct: 302 QIAMEVLEEMKMAEMEINFMVFNPIIDG-LGEAGRLSEALGMMERFFVCESGPTIVTYNS 360
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
L+ K + A ++ + M+ +G++P TY + K +E L ++ G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 425 MTP 427
+P
Sbjct: 421 HSP 423
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+E K + M ++ + +N + D L + G++ +A+ M E V I Y +L+K +C
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G+L A + M +G P TYN ++++ +N + ++ G P+ T
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 131 HKMIIEGLCSVGKVGEA 147
+ +I++ LC GK+ A
Sbjct: 428 YHLILKMLCEDGKLSLA 444
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
YN F K K ++ + + +L D Y ++K C G L A + E
Sbjct: 391 TTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKE 450
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
MKN+G PD++T +L +CR + A FD G+ P T KMI GL S G
Sbjct: 451 MKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKG 509
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 27/215 (12%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V Y + + C++ +V A+E+ EE+++ ++++ + +I G G L +A M
Sbjct: 286 VTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER 345
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT----------HKM 133
P IVTYN L C+ + A M + GV+P +TT H
Sbjct: 346 FFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNK 405
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE---------ASNNNNNYGDDKS 184
EG+ K+ EA +RL Y ++ CE + N G D
Sbjct: 406 TEEGMNLYFKLIEAGHSPDRL------TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
Query: 185 PTPISEVGY--CKVDLVEKAYELFLELSNKGDIAK 217
+ + + C+++++E+A+E F +G I +
Sbjct: 460 LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQ 494
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 159/378 (42%), Gaps = 59/378 (15%)
Query: 50 RVKNIDLDIKHYTTLIKGYCLQ-----------------GNLIDAFYM--FNEMKNKG-- 88
R+ N ++ Y +L+ C Q ++ DA ++ F KG
Sbjct: 52 RIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNSVRDALFVVDFCRTMRKGDS 111
Query: 89 ----FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+K YN L + + R + EM D V P+ T ++ G C +G V
Sbjct: 112 FEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 145 GEAEAHFNRL----QDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
EA+ + L D Y++ + G+C V+
Sbjct: 172 VEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKE------------------------VD 207
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
A+++F E++ G E S +L+ L I +A+ LL M+ N P+ Y++++
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
DALC G+ A +LF G PD YT +I S+C ++L EA L + M G+
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 321 PDVITYTVLLYGSFKNAA--ALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
P+VITY L+ G K A+ +++ M + + D++ Y+ LI G + N + A
Sbjct: 328 PNVITYNALIKGFCKKNVHKAMGLLS----KMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Query: 379 IRLFEDMIDKGLEPDKVT 396
RL M + GL P++ T
Sbjct: 384 YRLLSLMEESGLVPNQRT 401
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 123/312 (39%), Gaps = 64/312 (20%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
YN + +L + G V++ + E+ + DI + TL+ GYC G +++A +
Sbjct: 122 CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G PD TY G CR E A F EM +G N ++ +I GL K+
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 145 GEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
EA + +++D +V Y+ +++ C + +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS------------------------ 277
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
+A LF ++S G ++P MY++++
Sbjct: 278 EAMNLFKQMSESG-----------------------------------IKPDDCMYTVLI 302
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
+ C A L + + G P+V+TY +I +C+ N + +A+ L M + +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 321 PDVITYTVLLYG 332
PD+ITY L+ G
Sbjct: 362 PDLITYNTLIAG 373
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 10/252 (3%)
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNV 249
V +C+ ++E+ +L+ K C+ LL+ L G + + +L M V
Sbjct: 100 VDFCRTMRKGDSFEIKYKLTPK--------CYNNLLSSLARFGLVEEMKRLYTEMLEDLV 151
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P ++ +++ C +G A+ + G PD TYT+ I +CR + A
Sbjct: 152 SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFK 211
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+F++M + G + ++YT L+YG F+ A +D ++ MK +V Y+VLI+ L
Sbjct: 212 VFKEMTQNGCHRNEVSYTQLIYGLFE-AKKIDEALSLLVKMKDDNCCPNVRTYTVLIDAL 270
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ +A+ LF+ M + G++PD YT +I + + EAS LL+ M G+ P+
Sbjct: 271 CGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 430 HIISAVNRSILK 441
+A+ + K
Sbjct: 331 ITYNALIKGFCK 342
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 110/241 (45%), Gaps = 2/241 (0%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
GYCK+ V +A + L G + +T C ++ A K+ + M
Sbjct: 164 GYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHR 223
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+++ Y+ ++ L K A SL P+V TYT +I++ C EA++LF
Sbjct: 224 NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLF 283
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+ M GIKPD YTVL+ SF + LD + + M + + +V+ Y+ LI G K
Sbjct: 284 KQMSESGIKPDDCMYTVLI-QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK 342
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
N A+ L M+++ L PD +TY +I+ G + A LL M G+ P+
Sbjct: 343 -KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Query: 432 I 432
+
Sbjct: 402 V 402
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 118/290 (40%), Gaps = 29/290 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ ++ + E E + D +N + + CKLG V +A + L D D Y
Sbjct: 134 GLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTY 193
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T+ I G+C + + AF +F EM G + V+Y L G+ + A++ +M+
Sbjct: 194 TSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNN 177
D PN T+ ++I+ LC G+ EA F ++ + ++ +Y+ ++ +C
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSG----- 308
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
D +++A L + G + + L+ C ++ KA
Sbjct: 309 -------------------DTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKA 348
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
M LL M N+ P I Y+ ++ C G A L G P+
Sbjct: 349 MGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G S+ ++ FK+ ESG+ D Y ++ + C +D+A + E + + ++ Y
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LIKG+C + N+ A + ++M + PD++TYN L AG C + A ME
Sbjct: 334 NALIKGFC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEE 392
Query: 122 DGVEPNSTT 130
G+ PN T
Sbjct: 393 SGLVPNQRT 401
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/429 (22%), Positives = 186/429 (43%), Gaps = 26/429 (6%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
+ E G+ D + ++ ++ K G V +++++ ++++ ++ IK Y +L K +G
Sbjct: 175 DMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRG 234
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ A FN+M ++G +P TYN++ G + A+ F++M++ G+ P+ T
Sbjct: 235 RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFN 294
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNN---------NY 179
+I G C K+ EAE F ++ SV Y+ M+ GY ++ +
Sbjct: 295 TMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSS 354
Query: 180 GDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVGDIGK 236
G + + T S + G C + +A + + K K+ S F KLL GD+
Sbjct: 355 GIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA 414
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR--------GFTPDV 288
A ++L+ M +LNV Y ++++ C A L D+ + + +
Sbjct: 415 ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEP 474
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
Y +I C +A LF+ + +RG++ D L+ G K D I +
Sbjct: 475 SAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNP-DSSYEILK 532
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
M + + + Y +LI M DA + M++ G PD + +I ++ G
Sbjct: 533 IMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592
Query: 409 LMKEASELL 417
++ AS ++
Sbjct: 593 RVQTASRVM 601
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
+ L++ KG E+ L+ G + +++K+ + M+ L VE + Y+ + +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVIL 231
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G+ A+ F+ V G P TY M+ + L+ AL F+DMK RGI PD
Sbjct: 232 RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDA 291
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
T+ ++ G F +D ++ +MK +I VV Y+ +I G + D +D +R+FE+
Sbjct: 292 TFNTMING-FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
M G+EP+ TY+ ++ G M EA +L M +K + P + I
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSI 398
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 175/429 (40%), Gaps = 67/429 (15%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
YN++ +++ A+ E+++ + I D + T+I G+C + +A +F EMK
Sbjct: 258 YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMK 317
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
P +V+Y + G D + F+EM S G+EPN+TT+ ++ GLC GK+
Sbjct: 318 GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMV 377
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
EA+ + K + A +N+ + +L
Sbjct: 378 EAKNILKNMMAKHI------------APKDNSIF-----------------------LKL 402
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIG----------------KAMKLLETM----- 244
+ S GD+A K + L + + G +A+KLL+T+
Sbjct: 403 LVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEI 462
Query: 245 -----RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+L +EPS Y+ +++ LC+ G+T A LF + RG D +I +
Sbjct: 463 ILRHQDTLEMEPSA--YNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHA 519
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+ + + ++ + M RRG+ + Y +L+ D T M + D
Sbjct: 520 KEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDA-KTALDSMVEDGHVPDS 578
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDK--GLEPDKVTYTDMISLYYKKGLMKEASELL 417
+ +I L + + A R+ MIDK G+E + ++ +G ++EA +
Sbjct: 579 SLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRI 638
Query: 418 DEMSSKGMT 426
D ++ G T
Sbjct: 639 DLLNQNGHT 647
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 175/393 (44%), Gaps = 41/393 (10%)
Query: 52 KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARV 111
K + D + LI+ Y G + ++ +F +MK+ G + I +YN L + R +
Sbjct: 179 KGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMM 238
Query: 112 AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVN 167
A F++M S+GVEP T+ +++ G ++ A F ++ + + ++ M+N
Sbjct: 239 AKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 168 GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGD-IAKEESCFKLLT 226
G+C + K+D EK LF+E+ KG+ I + +
Sbjct: 299 GFCR---------------------FKKMDEAEK---LFVEM--KGNKIGPSVVSYTTMI 332
Query: 227 KLCLVGD-IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
K L D + +++ E MRS +EP+ YS +L LC GK A+++ + + +
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 286 P-DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA---ALD 341
P D + ++ S + + A ++ + M + + Y VL+ K +A A+
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 342 VINTIWRD----MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
+++T+ Q + ++ Y+ +I L A LF ++ +G++ D+
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDAL 511
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
++I + K+G + E+L MS +G+ S+
Sbjct: 512 NNLIRGHAKEGNPDSSYEILKIMSRRGVPRESN 544
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
E M P + Y+IV+ A +GKT L D V GF+PD+ TY +++
Sbjct: 246 EQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATG 305
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
N AL+L M+ G++P VI +T L+ G A L+ + + + DVVC
Sbjct: 306 NKPLAALNLLNHMREVGVEPGVIHFTTLIDG-LSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
Y+V+I G + E A +F++M +KG P+ TY MI + G KEA LL EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 422 SKGMTPSSHIISAVNRSILKARKV-QFHE 449
S+G P+ + S + ++ A KV + HE
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHE 453
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 12/231 (5%)
Query: 222 FKLLTKLCLVGDIGKAMKLLETM---RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDS 278
F LL +C G+ G A ++E ++ N P + Y+ +L +L V + K +++
Sbjct: 190 FNLL--ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQ 247
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY---GSFK 335
+ GFTPDV+TY ++ + R+ L +M + G PD+ TY +LL+ K
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNK 307
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
AAL+++N M++ + V+ ++ LI+GL + E ++ + G PD V
Sbjct: 308 PLAALNLLN----HMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
YT MI+ Y G +++A E+ EM+ KG P+ +++ R A K +
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFK 414
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+ LL MR + VEP I ++ ++D L GK + + D V G TPDVV YT MI
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL-----LYGSFKNAAALDVINTIWRDMK 351
Y L++A ++F++M +G P+V TY + + G FK A AL ++M+
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACAL------LKEME 424
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
+ + V YS L+N L +A + +DM++KG
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 36/290 (12%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ DVV++F + K +YN + +L + + + E++ D+ Y
Sbjct: 201 GLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTY 260
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++ G + + +EM GF PD+ TYN+L + ++ A+N + M
Sbjct: 261 NIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMRE 320
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI--------YSAMVNGYCEAS 173
GVEP +I+GL GK+ EA +F D++V++ Y+ M+ GY
Sbjct: 321 VGVEPGVIHFTTLIDGLSRAGKL-EACKYF---MDETVKVGCTPDVVCYTVMITGYISGG 376
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+EKA E+F E++ KG + + ++ C+ G
Sbjct: 377 E------------------------LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGK 412
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
+A LL+ M S P+ ++YS +++ L + GK A + V +G
Sbjct: 413 FKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 33/362 (9%)
Query: 40 DDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL 99
D IE RE ++ K + + + Y +A FN M G KP + + L
Sbjct: 123 DFLIEARE---YNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQL 179
Query: 100 AAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV 159
+C A F + + G+ P++ T+ +++ G + A F+ + +++
Sbjct: 180 LHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNC 239
Query: 160 EI----YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDI 215
+ Y+A+++ C++ GD V+ Y++F E+ N G
Sbjct: 240 VVDLLAYNALLDALCKS-------GD-----------------VDGGYKMFQEMGNLGLK 275
Query: 216 AKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL 275
S + C GD+ A K+L+ M+ ++ P+ ++ ++ LC K A L
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLL 335
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
D + +G PD TY +++ +C + A L M R PD TY ++L +
Sbjct: 336 LDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM-KTDNYEDAIRLFEDMIDKGLEPDK 394
D IW M + + V Y+V+I+GL+ K E+A R FE MID+G+ P
Sbjct: 396 -IGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYS 454
Query: 395 VT 396
T
Sbjct: 455 TT 456
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 143/335 (42%), Gaps = 32/335 (9%)
Query: 112 AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVN 167
A F+ M G++P ++ LC V A+ F + + S + YS +V
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 168 GYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
G+ + + G K + E C VDL+ AY LL
Sbjct: 217 GWARIRDAS---GARKVFDEMLERN-CVVDLL--AYN------------------ALLDA 252
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
LC GD+ K+ + M +L ++P ++I + A C G A + D P+
Sbjct: 253 LCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY-TVLLYGSFKNAAALDVINTI 346
V T+ +I + C+ + +A L +M ++G PD TY +++ Y + ++ +
Sbjct: 313 VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHC--DHCEVNRATKL 370
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI-SLYY 405
M +T+ D Y++++ L++ ++ A ++E M ++ P TYT MI L
Sbjct: 371 LSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSIL 440
KKG ++EA + M +G+ P S + + ++
Sbjct: 431 KKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLV 465
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
Y + +L +A F + G + +LL LC + A + + + P
Sbjct: 147 AYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVP 206
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
S YSI++ + AR +FD + R D++ Y ++++ C+ + +F
Sbjct: 207 SAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMF 266
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
Q+M G+KPD ++ + ++ ++ +A + + MK+ ++ +V ++ +I L K
Sbjct: 267 QEMGNLGLKPDAYSFAIFIH-AYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ +DA L ++MI KG PD TY +++ + + A++LL M P H
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 432 ISAVNRSILK 441
+ V + +++
Sbjct: 386 YNMVLKLLIR 395
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 139/326 (42%), Gaps = 22/326 (6%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG 88
+ +LC V+ A E + + I K Y+ L++G+ + A +F+EM +
Sbjct: 179 LLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERN 238
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
D++ YN L +C++ + F EM + G++P++ + + I C G V A
Sbjct: 239 CVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAY 298
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
+R++ Y + N Y + I + CK + V+ AY L E
Sbjct: 299 KVLDRMKR-----YDLVPNVY--------------TFNHIIKT-LCKNEKVDDAYLLLDE 338
Query: 209 LSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK 268
+ KG + ++ C ++ +A KLL M P + Y++VL L +G+
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS-LKEALDLFQDMKRRGIKPDVITYT 327
A +++ R F P V TYT MI+ R L+EA F+ M GI P T
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT-V 457
Query: 328 VLLYGSFKNAAALDVINTIWRDMKQT 353
+L +DV++ + M+++
Sbjct: 458 EMLRNRLVGWGQMDVVDVLAGKMERS 483
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E E +D +AYN + DALCK G VD +M +E+ + D + I YC
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCD 290
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ A+ + + MK P++ T+N + +C+N++ A DEM G P++ T
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWT 350
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRL 154
+ I+ C +V A +R+
Sbjct: 351 YNSIMAYHCDHCEVNRATKLLSRM 374
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 126/301 (41%), Gaps = 28/301 (9%)
Query: 165 MVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK-----------AYELFLELSNKG 213
+VN +++ N DD T ++ +LVE+ A+ FL
Sbjct: 37 LVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIP 96
Query: 214 DIAKEESCFKLLT-------KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
D A + +L + L+ D L+E E S ++ IV A
Sbjct: 97 DFAHSLESYHILVEILGSSKQFALLWDF-----LIEAREYNYFEISSKVFWIVFRAYSRA 151
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
A F+ V G P V +++S C + A + F K GI P TY
Sbjct: 152 NLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTY 211
Query: 327 TVLLYG--SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
++L+ G ++A+ ++ +M + +D++ Y+ L++ L K+ + + ++F++
Sbjct: 212 SILVRGWARIRDASG---ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQE 268
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M + GL+PD ++ I Y G + A ++LD M + P+ + + + +++ K K
Sbjct: 269 MGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEK 328
Query: 445 V 445
V
Sbjct: 329 V 329
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 107/204 (52%), Gaps = 1/204 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ +LC G+ A L M + P+ + Y+ ++D+ CH G+ A L + +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
PD+VT++ +IN++ + + EA +++++M R I P ITY ++ G F +D
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG-FCKQDRVDDA 134
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ M S DVV +S LING K ++ + +F +M +G+ + VTYT +I
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 404 YYKKGLMKEASELLDEMSSKGMTP 427
+ + G + A +LL+EM S G+ P
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAP 218
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 98/186 (52%), Gaps = 1/186 (0%)
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M +++ ++ + ++D LC G +A++LF +G P+V+TY MI+S+C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+A L + M + I PD++T++ L+ +F + I+++M + I + Y+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALI-NAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+I+G K D +DA R+ + M KG PD VT++ +I+ Y K + E+ EM +
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 424 GMTPSS 429
G+ ++
Sbjct: 180 GIVANT 185
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 28/266 (10%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+S + D V + D LCK G +A + E+ K I ++ Y +I +C G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
DA + M K PDIVT++ L + + A + EM + P + T+ +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 136 EGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+G C +V +A+ + + K V +S ++NGYC+A
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR----------------- 165
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
V+ E+F E+ +G +A + L+ C VGD+ A LL M S V P
Sbjct: 166 -------VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFD 277
I + +L LC + + A ++ +
Sbjct: 219 DYITFHCMLAGLCSKKELRKAFAILE 244
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 1/152 (0%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +A ++ + M ++ P+ I Y+ ++D C + A+ + DS +G +PDVVT++T
Sbjct: 96 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
+IN YC+ + +++F +M RRGI + +TYT L++G F LD + +M
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG-FCQVGDLDAAQDLLNEMISC 214
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
++ D + + ++ GL A + ED+
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A LF E+ KG + ++ C G A +LL M + P + +S +++
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
A K A ++ + P +TY +MI+ +C+ + + +A + M +G P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
DV+T++ L+ G K A +D I+ +M + I + V Y+ LI+G + + + A L
Sbjct: 149 DVVTFSTLINGYCK-AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
+MI G+ PD +T+ M++ K +++A +L+++
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 28/253 (11%)
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M K D+V + +C++ A N F EM G+ PN T+ +I+ C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 144 VGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+A+ + +K + +SA++N + + V
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERK------------------------V 96
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
+A E++ E+ + ++ C + A ++L++M S P + +S +
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
++ C + + +F RG + VTYTT+I+ +C++ L A DL +M G+
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 320 KPDVITYTVLLYG 332
PD IT+ +L G
Sbjct: 217 APDYITFHCMLAG 229
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
DVV T +++ C+ + A +LF +M +GI P+V+TY ++ SF ++ + +
Sbjct: 9 DVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMI-DSFCHSGRWSDADQL 67
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
R M + +I+ D+V +S LIN +K +A ++++M+ + P +TY MI + K
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ + +A +LD M+SKG +P S + KA++V
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 166
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S+ + +KE +F + YN + D CK +VDDA M + + K D+ ++TL
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
I GYC + + +F EM +G + VTY L G C+ + A + +EM S GV
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
P+ T ++ GLCS ++ +A A LQ
Sbjct: 217 APDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E E G+F + + YN + D+ C G+ DA ++ + K I+ DI ++ LI +
Sbjct: 33 FTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVK 92
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ + +A ++ EM P +TYN + G C+ D A D M S G P+ T
Sbjct: 93 ERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVT 152
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASN 174
+I G C +V F + + + Y+ +++G+C+ +
Sbjct: 153 FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 200
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%)
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
M Q+ I DVV + +++ L K N+ +A LF +M +KG+ P+ +TY MI + G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 410 MKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+A +LL M K + P SA+ + +K RKV
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKV 96
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 151/366 (41%), Gaps = 66/366 (18%)
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE-PNSTTHKMIIEGLCSVGKV 144
N G +P+ +N+L C+N + A +EM+ G+ PNS T+ +++ L + +
Sbjct: 189 NLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRS 248
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV----GYCKVDLVE 200
EA VE++ M++ + SP P++ G+C+ VE
Sbjct: 249 KEA-----------VELFEDMISK------------EGISPDPVTFNVMINGFCRAGEVE 285
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
+A K+L+ M+ P+ YS ++
Sbjct: 286 -----------------------------------RAKKILDFMKKNGCNPNVYNYSALM 310
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
+ C VGK + A+ FD G D V YTT++N +CR EA+ L +MK +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE-ISLDVVCYSVLINGLMKTDNYEDAI 379
D +TY V+L G + + + + D +E + L+ Y +++N L E A+
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQML--DQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSI 439
+ M ++G+ P T+ +++ + G + +L G+ P AV SI
Sbjct: 429 KFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESI 488
Query: 440 LKARKV 445
K RK+
Sbjct: 489 CKERKL 494
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 30/276 (10%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFK-PDIVTYNVLAAGVCRNDEARVAINNFDEM 119
+ L+K +C G++ AF + EMK G P+ +TY+ L + + ++ A+ F++M
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDM 258
Query: 120 ES-DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASN 174
S +G+ P+ T ++I G C G+V A+ + ++ + +V YSA++N
Sbjct: 259 ISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN------- 311
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
G+CKV +++A + F E+ G L+ C G+
Sbjct: 312 -----------------GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+AMKLL M++ + Y+++L L G+++ A + D + G + +Y +
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+N+ C L++A+ M RGI P T+ L+
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 29/280 (10%)
Query: 6 DVVDKFKE-FKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+ V+ F++ + G+ D V +N++ + C+ G+V+ A ++ + ++ + ++ +Y+ L
Sbjct: 250 EAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ G+C G + +A F+E+K G K D V Y L CRN E A+ EM++
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNNNYG 180
++ T+ +I+ GL S G+ EA ++ + V + Y ++N C
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC---------- 419
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
C +L EKA + +S +G + +L+ +LC G +++
Sbjct: 420 -------------CNGEL-EKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRV 465
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV 280
L + + P + V++++C K H L DS V
Sbjct: 466 LIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 40/215 (18%)
Query: 236 KAMKLLETMRSL-NVEPSQIMYSIVLDALCHVGKTKHARSLF-DSFVGRGFTPDVVTYTT 293
K M++ ++ + V+PS S L+ L G+ +R L + G P+ +
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIK-PDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
++ +C+ + A + ++MKR GI P+ ITY
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITY-------------------------- 235
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMK 411
S L++ L ++A+ LFEDMI K G+ PD VT+ MI+ + + G ++
Sbjct: 236 ----------STLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVE 285
Query: 412 EASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
A ++LD M G P+ + SA+ K K+Q
Sbjct: 286 RAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G + F E K++G+ LD V Y + + C+ G+ D+A+++ E++ D
Sbjct: 316 VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLT 375
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +++G +G +A M ++ ++G + +Y ++ +C N E A+ M
Sbjct: 376 YNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMS 435
Query: 121 SDGVEPNSTTHKMIIEGLCSVG 142
G+ P+ T ++ LC G
Sbjct: 436 ERGIWPHHATWNELVVRLCESG 457
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 176/414 (42%), Gaps = 23/414 (5%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E ++SG LD + +N V +A + G ++DA++ +++ ++ Y TLIKGY + G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 73 NLIDAFYMFNEMKNKG---FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ + + M +G P+I T+NVL C+ + A +ME GV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
T+ I G+ AE+ E+ MV +A N G I
Sbjct: 225 TYNTIATCYVQKGETVRAES----------EVVEKMVMKE-KAKPNGRTCG-------IV 266
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
GYC+ V + A L+ V D ++L M+ NV
Sbjct: 267 VGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNV 326
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+ I YS V++A G + A +F V G PD Y+ + Y R K+A +
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
L + + +P+V+ +T ++ G N + D + ++ M + +S ++ + L+ G
Sbjct: 387 LLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMR-VFNKMCKFGVSPNIKTFETLMWGY 444
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++ A + + M G++P+ T+ + + GL E+++ ++ + K
Sbjct: 445 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 498
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 156/370 (42%), Gaps = 30/370 (8%)
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
++ T L+ +G +A +F + G +P +++Y L A + + +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEAS 173
E+E G + +S +I G + +A ++++ + Y+ ++ GY
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY---- 160
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVG 232
G P SE+ +L LE N D+ F +L + C
Sbjct: 161 ------GIAGKPERSSEL-----------LDLMLEEGNV-DVGPNIRTFNVLVQAWCKKK 202
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARS-LFDSFVGR-GFTPDVVT 290
+ +A ++++ M V P + Y+ + G+T A S + + V + P+ T
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
++ YCR +++ L + MK ++ +++ + L+ G F D I+ + M
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING-FVEVMDRDGIDEVLTLM 321
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
K+ + DV+ YS ++N E A ++F++M+ G++PD Y+ + Y +
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 411 KEASELLDEM 420
K+A ELL+ +
Sbjct: 382 KKAEELLETL 391
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 118/258 (45%), Gaps = 41/258 (15%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG---FTPDV 288
G++ A++ L M+ L + P+ Y+ ++ GK + + L D + G P++
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT--------------------- 327
T+ ++ ++C+ ++EA ++ + M+ G++PD +TY
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 328 ----------------VLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+++ G + D + + R MK+ + ++V ++ LING ++
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFV-RRMKEMRVEANLVVFNSLINGFVE 307
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ + + M + ++ D +TY+ +++ + G M++A+++ EM G+ P +H
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 432 ISAVNRSILKARKVQFHE 449
S + + ++A++ + E
Sbjct: 368 YSILAKGYVRAKEPKKAE 385
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 16/168 (9%)
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV----- 342
V + T ++N EA +F+ + G +P +I+YT LL AA+ V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLL-------AAMTVQKQYG 97
Query: 343 -INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
I++I +++Q+ LD + ++ +IN ++ N EDA++ M + GL P TY +I
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 402 SLYYKKGLMKEASELLDEMSSKG---MTPSSHIISAVNRSILKARKVQ 446
Y G + +SELLD M +G + P+ + + ++ K +KV+
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FKE ++G+ D AY+I+ + + A E+ E L V++ ++ +TT+I G+C
Sbjct: 353 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 411
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ DA +FN+M G P+I T+ L G + A M GV+P ++T
Sbjct: 412 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 471
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI 161
++ E G E+ N L+ K +EI
Sbjct: 472 FLLLAEAWRVAGLTDESNKAINALKCKDIEI 502
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
+ KE + + V +N + + ++ D E+ ++ N+ D+ Y+T++ +
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G + A +F EM G KPD Y++LA G R E + A + + + PN
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIF 402
Query: 132 KMIIEGLCSVGKVGEAEAHFNRL----QDKSVEIYSAMVNGYCE 171
+I G CS G + +A FN++ +++ + ++ GY E
Sbjct: 403 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLE 446
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 36/236 (15%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
GY K+ LVE+ + +F E+ + G +C LL L + + ++ M + + P
Sbjct: 175 GYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHP 234
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ ++I+ + C+ + + GF PD+VTY T+++SYCR LKEA L+
Sbjct: 235 NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLY 294
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+ M RR + PD++TYT LI GL K
Sbjct: 295 KIMYRRRVVPDLVTYT------------------------------------SLIKGLCK 318
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+A + F M+D+G++PD ++Y +I Y K+G+M+++ +LL EM + P
Sbjct: 319 DGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVP 374
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 21/344 (6%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+V D ++ +E G D V YN + + C+ G++ +A + + + + + D+ YT+LI
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
KG C G + +A F+ M ++G KPD ++YN L C+ + + EM + V
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVV 373
Query: 126 PNSTTHKMIIEGLCSVGKVGEA---EAHFNRLQ-DKSVEIYSAMVNGYCEASNNN----- 176
P+ T K+I+EG G++ A RL+ D E+ ++ C+
Sbjct: 374 PDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHL 433
Query: 177 -----NNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC 229
G + P + + + D +E+A L +L N+ + ++ L+ LC
Sbjct: 434 LDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLC 493
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV--GRGFTPD 287
+G +A L+ M V+P + ++ C A L F R F P+
Sbjct: 494 RIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE 553
Query: 288 VVTYTTMINSYCRMN-SLKEALDLFQDMKRRGIKPDVITYTVLL 330
+Y +++ + C K+AL+L + M+R G P+ +T L+
Sbjct: 554 --SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 182/432 (42%), Gaps = 27/432 (6%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G+ + F+E +SG + V N + + L KL ++D ++ + I +
Sbjct: 179 LGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYT 238
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ L +C N + +M+ +GF+PD+VTYN L + CR + A + M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
V P+ T+ +I+GLC G+V EA F+R+ D+ ++ N A
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA-------- 350
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
YCK +++++ +L E+ + +C ++ G + A+
Sbjct: 351 ------------YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNF 398
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV---GRGFTPDVVTYTTMINS 297
+ +R L V+ + ++ +LC GK A+ L D + G P+ TY +I S
Sbjct: 399 VVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIES 456
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
R ++++EAL L +K + D TY L+ G ++ +M +E+
Sbjct: 457 LSRCDAIEEALVLKGKLKNQNQVLDAKTYRALI-GCLCRIGRNREAESLMAEMFDSEVKP 515
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL-MKEASEL 416
D L+ G K +++ A RL + D +Y ++ + G K+A EL
Sbjct: 516 DSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALEL 575
Query: 417 LDEMSSKGMTPS 428
+ M G P+
Sbjct: 576 QERMQRLGFVPN 587
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
D V + ++ Y ++ ++E +F+++ G V+T LL G K D +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQ-V 223
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ M + I + +++L N N+ + E M ++G EPD VTY ++S Y +
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+G +KEA L M + + P +++ + + K +V+
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVR 323
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 6/224 (2%)
Query: 222 FKLLTKLCLVGDIGKAMK-LLETMRS--LNVEPSQIMYSIVLDALCHVGKTKHARSLFDS 278
F LL +C G+ G A + +++ M+S N P + Y+ +L++L V + K ++
Sbjct: 187 FNLL--ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQ 244
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAA 338
+ GF+PDV+TY ++ + R+ + LF +M R G PD TY +LL+ K
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 339 ALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
L + T+ MK+ I V+ Y+ LI+GL + N E ++M+ G PD V YT
Sbjct: 305 PLAALTTL-NHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
MI+ Y G + +A E+ EM+ KG P+ +++ R + A
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 407
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 5/214 (2%)
Query: 236 KAMKLLETMRSLNVE----PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
K KL+E + +E P + Y+I+L +GK LFD GF+PD TY
Sbjct: 233 KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTY 292
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+++ + N AL MK GI P V+ YT L+ G A L+ +M
Sbjct: 293 NILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG-LSRAGNLEACKYFLDEMV 351
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ DVVCY+V+I G + + + A +F +M KG P+ TY MI G +
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 411
Query: 412 EASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
EA LL EM S+G P+ + S + + KA K+
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 21/336 (6%)
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
F+ + +Y++L E + DEM DG + T ++I CS G+ G A+
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAK 201
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
+ Y + Y N S +G + L+E Y+ LE
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILN--------------SLLGVKQYKLIEWVYKQMLE 247
Query: 209 LSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK 268
D+ LL +G + + +L + M P Y+I+L L K
Sbjct: 248 DGFSPDVLTYNI---LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTV 328
A + + G P V+ YTT+I+ R +L+ +M + G +PDV+ YTV
Sbjct: 305 PLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 329 LLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK 388
++ G + + LD ++R+M +V Y+ +I GL + +A L ++M +
Sbjct: 365 MITG-YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 389 GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
G P+ V Y+ ++S K G + EA +++ EM KG
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E G D YNI+ L K K A+ ++ ID + HYTTLI G
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
GNL Y +EM G +PD+V Y V+ G + E A F EM G PN T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVN 167
+ +I GLC G+ EA ++ + +YS +V+
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+++ +M GF PD++TYN+L R + FDEM DG P+S T+ +++ L
Sbjct: 240 WVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHIL 299
Query: 139 CSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASN-NNNNYGDDK------SPTP 187
K A N ++ D SV Y+ +++G A N Y D+ P
Sbjct: 300 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDV 359
Query: 188 ISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
+ GY ++KA E+F E++ KG + + ++ LC+ G+ +A LL+
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG----FTPDVVTY 291
M S P+ ++YS ++ L GK AR + V +G P ++ Y
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
KE G+ + Y + D L + G ++ +E+ D+ YT +I GY + G L
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A MF EM KG P++ TYN + G+C E R A EMES G PN + +
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 135 IEGLCSVGKVGEAE 148
+ L GK+ EA
Sbjct: 436 VSYLRKAGKLSEAR 449
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 36/175 (20%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
Y +++ G+ K L D V GF T+ +I S K+A+ F K
Sbjct: 152 YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSK 211
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+P FK++ Y+ ++N L+ Y
Sbjct: 212 TFNYRP------------FKHS------------------------YNAILNSLLGVKQY 235
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ +++ M++ G PD +TY ++ Y+ G M L DEM+ G +P S+
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSY 290
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 186/418 (44%), Gaps = 34/418 (8%)
Query: 39 VDDAIEMREELRVKNIDLDIKHYTTLIKGYC--LQGNLIDAFYMFNEM-KNKGFKPDIVT 95
V D R+ELR K + D+K L+ ++ + AF F K +G+ +
Sbjct: 104 VKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVRE 163
Query: 96 YNVLAAGVCRNDEARVAINNFDEMESDGVEP---NSTTHKMIIEGLCSVGKVGEAEAHFN 152
Y+ + + + + + A DEM P NS T ++I C+V VG+A F+
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRK--FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFH 221
Query: 153 RLQDKSVEI----YSAMVNGYCEASN----------NNNNYGDDKSPTPISEVGYCKV-D 197
+ +E+ + ++++ C N N + Y D I G+C V
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIG 281
Query: 198 LVEKAYELFLELSNKG---DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
+A +++E+ N G D+ S +K G + K +KL + M+ +EP +
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMISCYSK---GGSLNKVLKLFDRMKKECIEPDRK 338
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+Y+ V+ AL AR+L + +G P+VVTY ++I C+ +EA +F +
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M +G+ P + TY + +++ M++ V Y +LI L +
Sbjct: 399 MLEKGLFPTIRTYHAFMRILRTGEEVFELLAK----MRKMGCEPTVETYIMLIRKLCRWR 454
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
++++ + L+++M +K + PD +Y MI + G ++EA EM KGM P+ ++
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 6/225 (2%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ K C V D+GKA+ + +E + +L ALC A L F +
Sbjct: 203 MIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKD 260
Query: 284 FTP-DVVTYTTMINSYCR-MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD 341
P D ++ ++N +C + S +EA ++ +M G+K DV++Y+ ++ + +L+
Sbjct: 261 KYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI-SCYSKGGSLN 319
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID-KGLEPDKVTYTDM 400
+ ++ MK+ I D Y+ +++ L K +A L + M + KG+EP+ VTY +
Sbjct: 320 KVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSL 379
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
I K +EA ++ DEM KG+ P+ A R + +V
Sbjct: 380 IKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV 424
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 4/189 (2%)
Query: 256 YSIVLDALCHV-GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
++IVL+ C+V G + A ++ G DVV+Y++MI+ Y + SL + L LF M
Sbjct: 269 FNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRM 328
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
K+ I+PD Y +++ K + + N + ++ I +VV Y+ LI L K
Sbjct: 329 KKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARK 388
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
E+A ++F++M++KGL P TY + + + G +E ELL +M G P+
Sbjct: 389 TEEAKQVFDEMLEKGLFPTIRTYHAFMRI-LRTG--EEVFELLAKMRKMGCEPTVETYIM 445
Query: 435 VNRSILKAR 443
+ R + + R
Sbjct: 446 LIRKLCRWR 454
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 139/324 (42%), Gaps = 40/324 (12%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNID---LDIKHYTTL 64
++ F +K + + + + ALC+ V DA L N D D K + +
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA----GHLIFCNKDKYPFDAKSFNIV 272
Query: 65 IKGYC-LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
+ G+C + G+ +A ++ EM N G K D+V+Y+ + + + + FD M+ +
Sbjct: 273 LNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKEC 332
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVNGYCEASNNNNN 178
+EP+ + ++ L V EA ++++ +V Y++++ C+A
Sbjct: 333 IEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT--- 389
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
E+A ++F E+ KG + + ++ G+ +
Sbjct: 390 ---------------------EEAKQVFDEMLEKGLFPTIRT-YHAFMRILRTGE--EVF 425
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+LL MR + EP+ Y +++ LC + L+D + PD+ +Y MI+
Sbjct: 426 ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Query: 299 CRMNSLKEALDLFQDMKRRGIKPD 322
++EA +++MK +G++P+
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E E G+F Y+ F + + G ++ E+ ++R + ++ Y LI+ C
Sbjct: 396 FDEMLEKGLFPTIRTYH-AFMRILRTG--EEVFELLAKMRKMGCEPTVETYIMLIRKLCR 452
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ + +++EMK K PD+ +Y V+ G+ N + A + EM+ G+ PN
Sbjct: 453 WRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Query: 131 HKMI 134
MI
Sbjct: 513 EDMI 516
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 173/398 (43%), Gaps = 54/398 (13%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
AY+++ ++ K+ + ++ +R K + L+++ + +++ Y + +A Y FN M
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVM 194
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+ P++V +N L + +C++ R A F+ M D P+S T+ +++EG +
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNL 253
Query: 145 GEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTP--------ISEV- 191
+A F + D + YS MV+ C+A + G +S P I V
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 192 --GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
Y + +E+A + FLE+ G A L+ C + ++L+ M+S V
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P+ +I+L L G+ A +F + + PD TYT +I +C ++ A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADK 432
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+++ M+++G+ P + T+ SVLINGL
Sbjct: 433 VWKYMRKKGVFPSMHTF------------------------------------SVLINGL 456
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+ + A L E+MI+ G+ P VT+ + L K+
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE 494
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 164/388 (42%), Gaps = 71/388 (18%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T I+ Y L +LI+A M+ K ++ T+ ++ R + AI F+ ME
Sbjct: 144 TAKIRQYKLMWDLINA------MRKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEK 196
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV---EIYSAMVNGYCEASNNNNN 178
+ PN ++ LC V +A+ F ++D+ + YS ++ G+ + N
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPN---- 252
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
+ KA E+F E+ + G
Sbjct: 253 --------------------LPKAREVFREMIDAG------------------------- 267
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
P + YSI++D LC G+ A + S P Y+ ++++Y
Sbjct: 268 ----------CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTY 317
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
N L+EA+D F +M+R G+K DV + L+ G+F A + + + ++MK ++ +
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLI-GAFCKANRMKNVYRVLKEMKSKGVTPN 376
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
++++ L++ ++A +F MI K EPD TYT +I ++ +K M+ A ++
Sbjct: 377 SKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWK 435
Query: 419 EMSSKGMTPSSHIISAVNRSILKARKVQ 446
M KG+ PS H S + + + R Q
Sbjct: 436 YMRKKGVFPSMHTFSVLINGLCEERTTQ 463
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 138/306 (45%), Gaps = 22/306 (7%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
VA+N + ALCK V A E+ E +R D K Y+ L++G+ + NL A +F E
Sbjct: 204 VAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFRE 262
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M + G PDIVTY+++ +C+ A+ M+ +P + + +++ + +
Sbjct: 263 MIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENR 322
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ EA F ++ ++ A+ N A +CK + ++ Y
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGA--------------------FCKANRMKNVY 362
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
+ E+ +KG +SC +L L G+ +A + M + EP Y++V+
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMF 421
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
C + + A ++ +G P + T++ +IN C + ++A L ++M GI+P
Sbjct: 422 CEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSG 481
Query: 324 ITYTVL 329
+T+ L
Sbjct: 482 VTFGRL 487
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 31/251 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH-----YTTLI 65
F+E ++G D V Y+I+ D LCK G+VD+A+ + V+++D I Y+ L+
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI-----VRSMDPSICKPTTFIYSVLV 314
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
Y + L +A F EM+ G K D+ +N L C+ + + EM+S GV
Sbjct: 315 HTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT 374
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
PNS + +I+ L G+ +D++ +++ M+ CE D +
Sbjct: 375 PNSKSCNIILRHLIERGE-----------KDEAFDVFRKMIK-VCEP--------DADTY 414
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
T + ++ +C+ +E A +++ + KG + L+ LC KA LLE M
Sbjct: 415 TMVIKM-FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Query: 246 SLNVEPSQIMY 256
+ + PS + +
Sbjct: 474 EMGIRPSGVTF 484
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ VD F E + SGM D +N + A CK ++ + + +E++ K + + K ++
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIIL 384
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
+ +G +AF +F +M K +PD TY ++ C E A + M GV
Sbjct: 385 RHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF 443
Query: 126 PNSTTHKMIIEGLC 139
P+ T ++I GLC
Sbjct: 444 PSMHTFSVLINGLC 457
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 181/424 (42%), Gaps = 37/424 (8%)
Query: 14 FKESGMFLDGVAYNIVFDALCKLGKVDDA----IEMREELRVKNIDLDIKHYTTLIKGYC 69
++S D + +N++ DA + + +A +++ E V D Y LIK YC
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT----YALLIKAYC 223
Query: 70 LQGNLIDAFYMFNEMKNKGFKPD---IVTYNVLAAGVC-RNDEARVAINNFDEMESDGVE 125
+ G + A + EM+N P + YN G+ R AI+ F M+ D +
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
P + T+ ++I G+A + S ++Y M + C+ N Y
Sbjct: 284 PTTETYNLMI------NLYGKASKSY-----MSWKLYCEMRSHQCKP--NICTY------ 324
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
T + + + L EKA E+F +L G L+ G A ++ M+
Sbjct: 325 TALVN-AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+ EP + Y+I++DA G A ++F+ G P + ++ ++++Y + +
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 306 EALDLFQDMKRRGIKPD--VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+ + ++M G++PD V+ + LYG ++ I +M+ + D+ Y+
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME---KILAEMENGPCTADISTYN 500
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+LIN K E LF ++ +K PD VT+T I Y +K L + E+ +EM
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 424 GMTP 427
G P
Sbjct: 561 GCAP 564
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 180/423 (42%), Gaps = 36/423 (8%)
Query: 26 YNIVFDALCKLGKVDDA----IEMREELRVKNIDLDIKHYTTLIKGYC-LQGNLIDAFYM 80
Y ++ A C G ++ A +EM+ V + + Y I+G +GN +A +
Sbjct: 215 YALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 273
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
F MK KP TYN++ + ++ ++ + EM S +PN T+ ++
Sbjct: 274 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 333
Query: 141 VGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G +AE F +LQ+ +E +Y+A++ Y A YG + + + +G C+
Sbjct: 334 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA---GYPYGAAEIFSLMQHMG-CEP 389
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
D +Y + ++ + + + A + E M+ L + P+ +
Sbjct: 390 D--RASYNIMVDAYGRAGLHSD------------------AEAVFEEMKRLGIAPTMKSH 429
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++L A ++ G PD +M+N Y R+ + + +M+
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 489
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
D+ TY +L+ + A L+ I ++ ++K+ DVV ++ I + Y
Sbjct: 490 GPCTADISTYNILI-NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYV 548
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
+ +FE+MID G PD T ++S + +++ + +L M KG+T SS + +
Sbjct: 549 KCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLMA 607
Query: 437 RSI 439
+S+
Sbjct: 608 KSL 610
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 146/358 (40%), Gaps = 35/358 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + +D F+ K YN++ + K K + ++ E+R +I Y
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T L+ + +G A +F +++ G +PD+ YN L R A F M+
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G EP+ ++ ++++ G +AEA F ++ +
Sbjct: 385 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI---------------------- 422
Query: 182 DKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+PT S + Y K V K + E+S G E F L + L L G +G+
Sbjct: 423 --APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG---VEPDTFVLNSMLNLYGRLGQF 477
Query: 238 MKLLETMRSLNVEPSQI---MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
K+ + + + P Y+I+++ G + LF + F PDVVT+T+
Sbjct: 478 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 537
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
I +Y R + L++F++M G PD T VLL + + ++ + ++ R M +
Sbjct: 538 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL-SACSSEEQVEQVTSVLRTMHK 594
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI---MY 256
++A L+++L + E++ L+ C+ G I +A +L M++ +V P I +Y
Sbjct: 194 KEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVY 253
Query: 257 SIVLDALC-HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
+ ++ L G T+ A +F P TY MIN Y + + + L+ +M+
Sbjct: 254 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 313
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
KP++ TYT L+ +F + I+ +++ + DV Y+ L+ +
Sbjct: 314 SHQCKPNICTYTALV-NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS--SHII 432
A +F M G EPD+ +Y M+ Y + GL +A + +EM G+ P+ SH++
Sbjct: 373 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
KE E+G+ D N + + +LG+ ++ E+ DI Y LI Y
Sbjct: 450 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 509
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G L +F E+K K F+PD+VT+ R + F+EM G P+ T
Sbjct: 510 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 569
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYS 163
K+++ CS + E R K V + S
Sbjct: 570 KVLLSA-CSSEEQVEQVTSVLRTMHKGVTVSS 600
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 181/424 (42%), Gaps = 37/424 (8%)
Query: 14 FKESGMFLDGVAYNIVFDALCKLGKVDDA----IEMREELRVKNIDLDIKHYTTLIKGYC 69
++S D + +N++ DA + + +A +++ E V D Y LIK YC
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDT----YALLIKAYC 201
Query: 70 LQGNLIDAFYMFNEMKNKGFKPD---IVTYNVLAAGVC-RNDEARVAINNFDEMESDGVE 125
+ G + A + EM+N P + YN G+ R AI+ F M+ D +
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
P + T+ ++I G+A + S ++Y M + C+ N Y
Sbjct: 262 PTTETYNLMI------NLYGKASKSY-----MSWKLYCEMRSHQCKP--NICTY------ 302
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
T + + + L EKA E+F +L G L+ G A ++ M+
Sbjct: 303 TALVN-AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+ EP + Y+I++DA G A ++F+ G P + ++ ++++Y + +
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 306 EALDLFQDMKRRGIKPD--VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+ + ++M G++PD V+ + LYG ++ I +M+ + D+ Y+
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKME---KILAEMENGPCTADISTYN 478
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+LIN K E LF ++ +K PD VT+T I Y +K L + E+ +EM
Sbjct: 479 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 538
Query: 424 GMTP 427
G P
Sbjct: 539 GCAP 542
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 180/423 (42%), Gaps = 36/423 (8%)
Query: 26 YNIVFDALCKLGKVDDA----IEMREELRVKNIDLDIKHYTTLIKGYC-LQGNLIDAFYM 80
Y ++ A C G ++ A +EM+ V + + Y I+G +GN +A +
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNH-HVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
F MK KP TYN++ + ++ ++ + EM S +PN T+ ++
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 141 VGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G +AE F +LQ+ +E +Y+A++ Y A YG + + + +G C+
Sbjct: 312 EGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA---GYPYGAAEIFSLMQHMG-CEP 367
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
D +Y + ++ + + + A + E M+ L + P+ +
Sbjct: 368 D--RASYNIMVDAYGRAGLHSD------------------AEAVFEEMKRLGIAPTMKSH 407
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++L A ++ G PD +M+N Y R+ + + +M+
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 467
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
D+ TY +L+ + A L+ I ++ ++K+ DVV ++ I + Y
Sbjct: 468 GPCTADISTYNILI-NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYV 526
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
+ +FE+MID G PD T ++S + +++ + +L M KG+T SS + +
Sbjct: 527 KCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVTVSSLVPKLMA 585
Query: 437 RSI 439
+S+
Sbjct: 586 KSL 588
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 146/358 (40%), Gaps = 35/358 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + +D F+ K YN++ + K K + ++ E+R +I Y
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T L+ + +G A +F +++ G +PD+ YN L R A F M+
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G EP+ ++ ++++ G +AEA F ++ +
Sbjct: 363 MGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI---------------------- 400
Query: 182 DKSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+PT S + Y K V K + E+S G E F L + L L G +G+
Sbjct: 401 --APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG---VEPDTFVLNSMLNLYGRLGQF 455
Query: 238 MKLLETMRSLNVEPSQI---MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
K+ + + + P Y+I+++ G + LF + F PDVVT+T+
Sbjct: 456 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSR 515
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
I +Y R + L++F++M G PD T VLL + + ++ + ++ R M +
Sbjct: 516 IGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL-SACSSEEQVEQVTSVLRTMHK 572
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQI---MY 256
++A L+++L + E++ L+ C+ G I +A +L M++ +V P I +Y
Sbjct: 172 KEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVY 231
Query: 257 SIVLDALC-HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
+ ++ L G T+ A +F P TY MIN Y + + + L+ +M+
Sbjct: 232 NAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR 291
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
KP++ TYT L+ +F + I+ +++ + DV Y+ L+ +
Sbjct: 292 SHQCKPNICTYTALV-NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS--SHII 432
A +F M G EPD+ +Y M+ Y + GL +A + +EM G+ P+ SH++
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
KE E+G+ D N + + +LG+ ++ E+ DI Y LI Y
Sbjct: 428 KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKA 487
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
G L +F E+K K F+PD+VT+ R + F+EM G P+ T
Sbjct: 488 GFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTA 547
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYS 163
K+++ CS + E R K V + S
Sbjct: 548 KVLLSA-CSSEEQVEQVTSVLRTMHKGVTVSS 578
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 202/478 (42%), Gaps = 79/478 (16%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V++ ++ ALC G+ +DA+E+ +E+ +N + + TL+ G G++ A +F+
Sbjct: 139 VSWTVMLTALCDDGRSEDAVELFDEMPERN----VVSWNTLVTGLIRNGDMEKAKQVFDA 194
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M ++ D+V++N + G ND A F +M E N T ++ G C G
Sbjct: 195 MPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGYCRYGD 246
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYC-------------------EASNNNN------- 177
V EA F + ++++ ++AM++G+ +A + N
Sbjct: 247 VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLA 306
Query: 178 -----------NYGDDKSPTPISEVGYCKVDLVEK-AYELFLELSNKGDIAKEES----- 220
G+ IS G+ VD + A L ++ G IA +S
Sbjct: 307 YACGGLGVEFRRLGEQLHAQVISN-GWETVDHDGRLAKSLVHMYASSGLIASAQSLLNES 365
Query: 221 -----CFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL 275
C ++ + GD+ +A L E ++SL+ ++ ++ ++D G A L
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGL 422
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
F + D VT+T MI+ + EA L DM R G+KP TY+VLL S
Sbjct: 423 FQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL-SSAG 477
Query: 336 NAAALDVINTIWRDMKQTEISL--DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
+ LD I + +T D++ + L++ K EDA +F M+ K D
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----D 533
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS----HIISAVNRSILKARKVQF 447
V++ MI GL +A L EM G P+S ++SA + S L R ++
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 202/484 (41%), Gaps = 105/484 (21%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLG------KVDDAIEMR--------- 46
G D V+ F E E + V++N + L + G +V DA+ R
Sbjct: 152 GRSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
Query: 47 ---------EELRVKNIDLDIKH---YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIV 94
EE ++ D+ K+ +T+++ GYC G++ +A+ +F EM + +IV
Sbjct: 208 KGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER----NIV 263
Query: 95 TYNVLAAGVCRNDEARVAINNFDEMESD--GVEPNSTTHKMIIEGLCSVGKVGEAEAHFN 152
++ + +G N+ R A+ F EM+ D V PN T +I + G +G F
Sbjct: 264 SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET---LISLAYACGGLG---VEFR 317
Query: 153 RLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNK 212
RL + ++++ +++ E +++ KS + Y L+ A L L+
Sbjct: 318 RLGE---QLHAQVISNGWETVDHDGRLA--KSLVHM----YASSGLIASAQSL---LNES 365
Query: 213 GDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
D+ +SC ++ + GD+ +A L E ++SL+ ++ ++ ++D G A
Sbjct: 366 FDL---QSCNIIINRYLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRA 419
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
LF + D VT+T MI+ + EA L DM R G+KP TY+VLL
Sbjct: 420 FGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 333 S------------------------------------FKNAAALDVINTIWRDMKQTEIS 356
+ + A++ I+ M Q
Sbjct: 476 AGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK--- 532
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D V ++ +I GL + A+ LF++M+D G +P+ VT+ ++S GL+ EL
Sbjct: 533 -DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLEL 591
Query: 417 LDEM 420
M
Sbjct: 592 FKAM 595
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 178/418 (42%), Gaps = 60/418 (14%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V + + K G +D+A + E + +NI ++ GY + +A+ +F E
Sbjct: 78 VYWTSLLSKYAKTGYLDEARVLFEVMPERNI----VTCNAMLTGYVKCRRMNEAWTLFRE 133
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
M ++V++ V+ +C + + A+ FDEM E N + ++ GL G
Sbjct: 134 MPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNVVSWNTLVTGLIRNGD 184
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN---YGDDKSPTPISEV----GYCKV 196
+ +A+ F+ + + V ++AM+ GY E +GD ++ GYC+
Sbjct: 185 MEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRY 244
Query: 197 DLVEKAYELFLELSNKGDIAKEE--SCF--------KLLTKLCLVGDIGKAMKLLETMRS 246
V +AY LF E+ + ++ S F L+ L + D+ ET+ S
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 247 -------LNVEPSQIMYSIVLDALCHVGKT-----KHARSLFDSFVGRGFTP-------- 286
L VE ++ + + + +T + A+SL + G
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 287 --DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
D+ + +IN Y + L+ A LF+ +K D +++T ++ G + A DV
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLE---AGDVSR 418
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
+ Q D V ++V+I+GL++ + + +A L DM+ GL+P TY+ ++S
Sbjct: 419 AF--GLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLS 474
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 34/239 (14%)
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A L ++ +G I + LL+K G + +A L E M N+ M L
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAM----LT 116
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
+ A +LF R +VV++T M+ + C ++A++LF +M R
Sbjct: 117 GYVKCRRMNEAWTLF-----REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER---- 167
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTE------ISLDVVCYSVLINGLMKTDNY 375
+V+++ L+ G +N DM++ + S DVV ++ +I G ++ D
Sbjct: 168 NVVSWNTLVTGLIRNG-----------DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGM 216
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
E+A LF DM +K + VT+T M+ Y + G ++EA L EM + + + +IS
Sbjct: 217 EEAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 14/166 (8%)
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G HAR L D RG VV +T++++ Y + L EA LF+ M R +++T
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTC 111
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
+L G K ++ T++R+M + +VV ++V++ L EDA+ LF++M
Sbjct: 112 NAMLTGYVK-CRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
++ + V++ +++ + G M++A ++ D M S+ + + +I
Sbjct: 166 ERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMI 207
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 143/351 (40%), Gaps = 56/351 (15%)
Query: 46 REELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
R+ +RVK +I + L+ C G + + + M+++ KPD T+NVL G CR
Sbjct: 223 RKRIRVKT-QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCR 280
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
+ + A+ +EM G +P + T+ I+ C G V EA F+ + K +
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAV---- 336
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+PT K + L + K D K E CF+L+
Sbjct: 337 -----------------SAPTA-------------KTFALMIVALAKND--KAEECFELI 364
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
++ G + P Y V++ +C K A D +G+
Sbjct: 365 GRMISTGCL----------------PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
PD+VTY + C EAL L+ M P V TY +L+ F+ NT
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 468
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE-PDKV 395
W +M + + DV Y +INGL ++A L E++++KGL+ P +V
Sbjct: 469 -WTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRV 518
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
LL LC G + + LL MR V+P ++++ C V K A L + + G
Sbjct: 240 LLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAG 298
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK---PDVITYTVLLYGSFKNAAAL 340
P+ TY I+++C+ + EA DLF M +G P T+ +++ KN A
Sbjct: 299 HKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAE 358
Query: 341 DVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
+ I R M T DV Y +I G+ + ++A + ++M +KG PD VTY
Sbjct: 359 ECFELIGR-MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 417
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ + + EA +L M PS
Sbjct: 418 LRVLCENRKTDEALKLYGRMVESRCAPS 445
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ +P ++++LDALC G K +L R PD T+ + +CR+ K+
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKK 286
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM--KQTEISLDVV-CYS 363
A+ L ++M G KP+ TY + +F A +D ++ M K + +S ++
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAI-DTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFA 345
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
++I L K D E+ L MI G PD TY D+I + EA + LDEMS+K
Sbjct: 346 LMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNK 405
Query: 424 GMTPSSHIISAVNRSILKARKV 445
G P + R + + RK
Sbjct: 406 GYPPDIVTYNCFLRVLCENRKT 427
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 121/310 (39%), Gaps = 53/310 (17%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A+N++ DALCK G V + + +R + + D + L G+C + A + EM
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLLEEM 294
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G KP+ TY C+ A + FD M + G ++ T K + ++ K
Sbjct: 295 IEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKN 354
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
+AE F E+ M++ C + + Y D + E G C + V++AY+
Sbjct: 355 DKAEECF--------ELIGRMISTGCLP--DVSTYKD------VIE-GMCMAEKVDEAYK 397
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
E+SNKG P + Y+ L LC
Sbjct: 398 FLDEMSNKG-----------------------------------YPPDIVTYNCFLRVLC 422
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
KT A L+ V P V TY +I+ + M+ A + + +M +R DV
Sbjct: 423 ENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVE 482
Query: 325 TYTVLLYGSF 334
TY ++ G F
Sbjct: 483 TYCAMINGLF 492
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 79/203 (38%), Gaps = 48/203 (23%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDL-------------- 56
+E E+G + Y D C+ G VD+A ++ + + K +
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 57 ------------------------DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPD 92
D+ Y +I+G C+ + +A+ +EM NKG+ PD
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 93 IVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFN 152
IVTYN +C N + A+ + M P+ T+ M+I ++ + + FN
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMF---FEMDDPDGAFN 467
Query: 153 RLQD-------KSVEIYSAMVNG 168
+ + VE Y AM+NG
Sbjct: 468 TWTEMDKRDCVQDVETYCAMING 490
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
+G D Y V + +C KVD+A + +E+ K DI Y ++ C +
Sbjct: 370 TGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDE 429
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A ++ M P + TYN+L + D+ A N + EM+ + T+ +I
Sbjct: 430 ALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Query: 137 GLCSVGKVGEA 147
GL + EA
Sbjct: 490 GLFDCHRAKEA 500
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 32/344 (9%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEM-REELRVKN---IDLDIKHYTTLIKGYCLQGNLIDA 77
D +YNI+ C G+VD A ++ +E R+++ + LD Y T+IK + A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
+ ++MK+ G P+ T++ L + A + F+EM + G EPNS +++
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD-------KSPTPISE 190
+ A F + SV N + Y DD SP +
Sbjct: 454 CVEACQYDRAFRLFQSWKGSSV---------------NESLYADDIVSKGRTSSPNILKN 498
Query: 191 VGYCKVDLVEK-AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
G LV + + +++ S + + + +L K C D + +L++ M+SL +
Sbjct: 499 NG--PGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT-DYYRGKELMDEMKSLGL 555
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P+QI +S ++D G + A + + G PDVV YTT I LK A
Sbjct: 556 SPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFS 615
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN--TIWRDMK 351
LF++M+R IKP+ +TY LL K + L+V I++DM+
Sbjct: 616 LFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMR 659
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 207 LELSNKGDIAKEESCFKLLTKLCLV---------GDIGKAMKLLETMRSLNVEPSQIMYS 257
+E+SN +A +C T+L L GD+ M E + + P+ +
Sbjct: 213 VEISNP-QLAIRYACLLPHTELLLCRIIHGFGKKGDMVSVMTAYEACKQILDTPNMYICR 271
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS--LKEALDLFQDMK 315
++D G +R +++ + P++ +INS +NS L L ++++M+
Sbjct: 272 TMIDVCGLCGDYVKSRYIYEDLLKENIKPNIY----VINSLMNVNSHDLGYTLKVYKNMQ 327
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS----LDVVCYSVLINGLMK 371
+ D+ +Y +LL + A +D+ I+++ K+ E S LD Y +I
Sbjct: 328 ILDVTADMTSYNILL-KTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFAD 386
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
++ A+++ +DM G+ P+ T++ +IS GL+++A+ L +EM + G P+S
Sbjct: 387 AKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQ 445
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 160/418 (38%), Gaps = 95/418 (22%)
Query: 43 IEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE---MKNKGF-KPDIVTYNV 98
+++ + +++ ++ D+ Y L+K CL G + A ++ E M++ G K D TY
Sbjct: 320 LKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCT 379
Query: 99 LAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS 158
+ + A+ D+M+S GV PN+ T
Sbjct: 380 IIKVFADAKMWKWALKVKDDMKSVGVTPNTHT---------------------------- 411
Query: 159 VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKE 218
+S++++ A LVE+A LF E+ G
Sbjct: 412 ---WSSLISACANAG------------------------LVEQANHLFEEMLASG-CEPN 443
Query: 219 ESCFKLLTKLCL-VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
CF +L C+ +A +L ++ + S + S+ D + G+T L +
Sbjct: 444 SQCFNILLHACVEACQYDRAFRLFQSWKG-----SSVNESLYADDIVSKGRTSSPNILKN 498
Query: 278 ----SFVGRG-------------FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
S V R F P TY ++ + C + + +L +MK G+
Sbjct: 499 NGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYYR-GKELMDEMKSLGLS 556
Query: 321 PDVITYTVLL---YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
P+ IT++ L+ GS A+ ++ R M DVV Y+ I + +
Sbjct: 557 PNQITWSTLIDMCGGSGDVEGAVRIL----RTMHSAGTRPDVVAYTTAIKICAENKCLKL 612
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL---DEMSSKGMTPSSHII 432
A LFE+M ++P+ VTY ++ K G + E + L +M + G P+ H +
Sbjct: 613 AFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFL 670
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 159/400 (39%), Gaps = 51/400 (12%)
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
T+I L G+ + + Y++ ++ + KP+I N L + + + + M+
Sbjct: 272 TMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMN--VNSHDLGYTLKVYKNMQIL 329
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFN---RLQDKSVEIYSAMVNGYCEASNNNNNY 179
V + T++ ++++ C G+V A+ + R++ + A YC
Sbjct: 330 DVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFT--YCT-------- 379
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
I +V + + + A ++ ++ + G + L++ G + +A
Sbjct: 380 --------IIKV-FADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANH 430
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG-----FTPDVVTYTTM 294
L E M + EP+ ++I+L A + A LF S+ G + D+V+
Sbjct: 431 LFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRT 490
Query: 295 INSYCRMNSLKEAL-------DLFQDMKRRGIKPDVITYTVLLYGS----FKNAAALDVI 343
+ N+ +L Q KR KP TY +LL ++ +D
Sbjct: 491 SSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGKELMD-- 548
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+MK +S + + +S LI+ + + E A+R+ M G PD V YT I +
Sbjct: 549 -----EMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKI 603
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
+ +K A L +EM + P+ ++LKAR
Sbjct: 604 CAENKCLKLAFSLFEEMRRYQIKPN----WVTYNTLLKAR 639
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E K G+ + + ++ + D G V+ A+ + + D+ YTT IK C +
Sbjct: 549 EMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIK-ICAEN 607
Query: 73 NLID-AFYMFNEMKNKGFKPDIVTYNVLAAGVCRND---EARVAINNFDEMESDGVEPNS 128
+ AF +F EM+ KP+ VTYN L + E R + + +M + G +PN
Sbjct: 608 KCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPND 667
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
K +IE C G + E +++ D+
Sbjct: 668 HFLKELIEEWCE-GVIQENGQSQDKISDQ 695
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 22/352 (6%)
Query: 39 VDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNV 98
V A+E+ + + ++ +++ +++ G L +F++MK G KPD+VTYN
Sbjct: 147 VSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNT 206
Query: 99 LAAGVCR-NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
L AG + + AI E+ +G++ +S + ++ S G+ EAE N +Q
Sbjct: 207 LLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE---NFIQQM 263
Query: 158 SVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAK 217
VE +S + Y N+ + GD K KA EL E+ + G +
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYK-----------------KADELMTEMKSIGLVPN 306
Query: 218 EESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
+ LL G ++ +LL + S +++ Y +++D L GK + ARS+FD
Sbjct: 307 KVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFD 366
Query: 278 SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
G+G D + MI++ CR KEA +L +D + K D++ +L ++ A
Sbjct: 367 DMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTML-CAYCRA 425
Query: 338 AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
++ + + + M + +S D + +LI +K + A + DM KG
Sbjct: 426 GEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 8/224 (3%)
Query: 204 ELFLELSNKGDIAKE--ESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
+LF + G I+ SC K + ++ KA+++ +++ + + + + + +L
Sbjct: 119 QLFEWMQQHGKISVSTYSSCIKFVG----AKNVSKALEIYQSIPDESTKINVYICNSILS 174
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM-NSLKEALDLFQDMKRRGIK 320
L GK LFD G PDVVTY T++ ++ N +A++L ++ GI+
Sbjct: 175 CLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQ 234
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
D + Y +L N + + N I + MK S ++ YS L+N +Y+ A
Sbjct: 235 MDSVMYGTVLAICASNGRSEEAENFI-QQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADE 293
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
L +M GL P+KV T ++ +Y K GL + ELL E+ S G
Sbjct: 294 LMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAG 337
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 28/258 (10%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++ E +G+ +D V Y V G+ ++A ++++V+ +I HY++L+
Sbjct: 221 AIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLN 280
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
Y +G+ A + EMK+ G P+ V L + + E+ES G
Sbjct: 281 SYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAE 340
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDD 182
N + M+++GL GK+ EA + F+ ++ K V S M++ C + + +
Sbjct: 341 NEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRS----KRFKEA 396
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
K + SE Y K DLV + N +L C G++ M++++
Sbjct: 397 KELSRDSETTYEKCDLV---------MLN-----------TMLCAYCRAGEMESVMRMMK 436
Query: 243 TMRSLNVEPSQIMYSIVL 260
M V P + I++
Sbjct: 437 KMDEQAVSPDYNTFHILI 454
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 149/342 (43%), Gaps = 31/342 (9%)
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
+ P + YNV+ V R + +A FDEM + P+ T+ +I G A
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSAL 210
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
+ +++ V + + E S +Y KA +F
Sbjct: 211 SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS--------------------KAISIFSR 250
Query: 209 LSNKG---DIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
L G D+ S + K L + A L++ M V P+ + YS +L
Sbjct: 251 LKRSGITPDLVAYNSMINVYGKAKLFRE---ARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
K A S+F D+ T MI+ Y +++ +KEA LF +++ I+P+V++
Sbjct: 308 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 367
Query: 326 YTVLL--YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFE 383
Y +L YG A ++R M++ +I +VV Y+ +I KT +E A L +
Sbjct: 368 YNTILRVYGE---AELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 384 DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+M +G+EP+ +TY+ +IS++ K G + A+ L ++ S G+
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 192/447 (42%), Gaps = 47/447 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E ++ + D Y+ + + K G D A+ +++ + D+ Y+ LI+ L
Sbjct: 178 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE---L 234
Query: 71 QGNLID---AFYMFNEMKNKGFKPDIVTYNVL-----AAGVCRNDEARVAINNFDEMESD 122
L D A +F+ +K G PD+V YN + A + R EAR+ I EM
Sbjct: 235 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFR--EARLLIK---EMNEA 289
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
GV PN+ ++ ++ K EA + +++ M C N D
Sbjct: 290 GVLPNTVSYSTLLSVYVENHKFLEA-----------LSVFAEMKEVNCALDLTTCNIMID 338
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD---IGKAMK 239
Y ++D+V++A LF L K DI E + T L + G+ G+A+
Sbjct: 339 ---------VYGQLDMVKEADRLFWSL-RKMDI--EPNVVSYNTILRVYGEAELFGEAIH 386
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
L M+ ++E + + Y+ ++ + + A +L RG P+ +TY+T+I+ +
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+ L A LFQ ++ G++ D + Y ++ +++ + + ++K D
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV-AYERVGLMGHAKRLLHELKLP----DN 501
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ I L K E+A +F + G D + MI+LY + E+ ++
Sbjct: 502 IPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 561
Query: 420 MSSKGMTPSSHIISAVNRSILKARKVQ 446
M + G P S++I+ V + K R+ +
Sbjct: 562 MRTAGYFPDSNVIAMVLNAYGKQREFE 588
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 174/428 (40%), Gaps = 35/428 (8%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM + ++ ++ + D V Y+ + + +L AI + L+ I D+ Y
Sbjct: 204 GMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAY 263
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++I Y +A + EM G P+ V+Y+ L + N + A++ F EM+
Sbjct: 264 NSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNNN 177
+ TT ++I+ + V EA+ F L+ +E Y+ ++ Y EA
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA----- 378
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC-LVGDIGK 236
+L +A LF L + DI + + + K+ + K
Sbjct: 379 -------------------ELFGEAIHLF-RLMQRKDIEQNVVTYNTMIKIYGKTMEHEK 418
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A L++ M+S +EP+ I YS ++ GK A +LF G D V Y TMI
Sbjct: 419 ATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIV 478
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
+Y R+ + A L ++K P T+L A + ++R ++
Sbjct: 479 AYERVGLMGHAKRLLHELKLPDNIPRETAITIL-----AKAGRTEEATWVFRQAFESGEV 533
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
D+ + +IN + Y + I +FE M G PD +++ Y K+ ++A +
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 417 LDEMSSKG 424
EM +G
Sbjct: 594 YREMQEEG 601
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
+TP V Y ++ + R A LF +M++R + PD TY+ L+ SF D
Sbjct: 151 YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLI-TSFGKEGMFDSA 209
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ + M+Q +S D+V YS LI + +Y AI +F + G+ PD V Y MI++
Sbjct: 210 LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINV 269
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSS 429
Y K L +EA L+ EM+ G+ P++
Sbjct: 270 YGKAKLFREARLLIKEMNEAGVLPNT 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 171/423 (40%), Gaps = 35/423 (8%)
Query: 5 SDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
S + F K SG+ D VAYN + + K +A + +E+ + + Y+TL
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
+ Y ++A +F EMK D+ T N++ + D + A F + +
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG 180
EPN ++ I+ GEA F +Q K +E Y+ M+ Y + +
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH----- 416
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
EKA L E+ ++G + +++ G + +A L
Sbjct: 417 -------------------EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATL 457
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ +RS VE Q++Y ++ A VG HA+ L PD + T I +
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAK 513
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+EA +F+ G D+ + ++ +N ++VI ++ M+ D
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIE-VFEKMRTAGYFPDSN 572
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKG-LEPDKVTYTDMISLYYKKGLMKEASELLDE 419
++++N K +E A ++ +M ++G + PD+V + M+SLY K + L
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQR 631
Query: 420 MSS 422
+ S
Sbjct: 632 LES 634
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 176/432 (40%), Gaps = 64/432 (14%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
K+S + YN + D L K+ + ++ ++ +E+ ++ ++ K Y L+ Y +
Sbjct: 135 KQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKV 194
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD-GVEPNSTTHKM 133
+A +F K G D+V ++ L +CR A F + G + + M
Sbjct: 195 DEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMN--M 252
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY 193
I+ G C +G V EA+ + ++ C
Sbjct: 253 ILNGWCVLGNVHEAK-----------RFWKDIIASKC----------------------- 278
Query: 194 CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ 253
+ D+ + LTK G +GKAM+L M P
Sbjct: 279 ------------------RPDVVSYGTMINALTK---KGKLGKAMELYRAMWDTRRNPDV 317
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+ + V+DALC + A +F +G P+VVTY +++ C++ ++ +L ++
Sbjct: 318 KICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEE 377
Query: 314 MKRRG--IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
M+ +G P+ +T++ LL S ++ ++ + M + + + Y+++ ++
Sbjct: 378 MELKGGSCSPNDVTFSYLLKYSQRSKD----VDIVLERMAKNKCEMTSDLYNLMFRLYVQ 433
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
D E ++ +M GL PD+ TYT I + KG + EA EM SKGM P
Sbjct: 434 WDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Query: 432 ISAVNRSILKAR 443
+N++ K R
Sbjct: 494 EMLLNQNKTKPR 505
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 132/331 (39%), Gaps = 36/331 (10%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL---RVKNIDLDIKHYT 62
+ V F+ KE G+ D VA++ + LC+ V E E L R + DIK
Sbjct: 196 EAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHV----EFAETLFCSRRREFGCDIKAMN 251
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
++ G+C+ GN+ +A + ++ +PD+V+Y + + + + A+ + M
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
P+ +I+ LC ++ EA F + +K + N +
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH---------- 361
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNK-GDIAKEESCFKLLTKLCLVG---DIGKAM 238
CK+ EK +EL E+ K G + + F L K DI
Sbjct: 362 ----------LCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---- 407
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+LE M E + +Y+++ K + R ++ G PD TYT I+
Sbjct: 408 -VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
+ EAL FQ+M +G+ P+ T +L
Sbjct: 467 HTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
S ++Y+ +LD L + + + +FD R + TY ++N Y + + EA+ +F
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 312 QDMKRRGIKPDVITYTVLL---------------YGSFKNAAALDV--INTI-------- 346
+ K GI D++ + LL + S + D+ +N I
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLG 261
Query: 347 --------WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
W+D+ ++ DVV Y +IN L K A+ L+ M D PD
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
++I K + EA E+ E+S KG P+ +++ + + K R+ +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE 369
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 36/262 (13%)
Query: 90 KPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA-E 148
KPD TYN+L G ++ A+ FDEM V+P T +I GLC +V EA +
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 149 AHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
+ L+ +V IY++++ C+ I E+ + L ++AYE
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQ----------------IGELSFA-FKLKDEAYE 251
Query: 205 LFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
G I + + + L++ L G + +LE M +P + Y+++++
Sbjct: 252 --------GKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
C ++ A + D V +G PDV++Y ++ + R+ +EA LF+DM RRG PD
Sbjct: 304 CVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDT 363
Query: 324 ITYTVLLYG-----SFKNAAAL 340
++Y ++ G F+ AA +
Sbjct: 364 LSYRIVFDGLCEGLQFEEAAVI 385
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 113/224 (50%), Gaps = 4/224 (1%)
Query: 209 LSNKGDIAKEESC-FKLLTKLC-LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
LS+ + K ++C + +L C G A+KL + M V+P+ + + ++ LC
Sbjct: 141 LSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKD 200
Query: 267 GKTKHARSL-FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
+ K A + D G P V Y ++I + C++ L A L + IK D
Sbjct: 201 SRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAI 260
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
Y+ L+ S A + ++ I +M + D V Y+VLING ++ E A R+ ++M
Sbjct: 261 YSTLI-SSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM 319
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
++KGL+PD ++Y ++ ++++ +EA+ L ++M +G +P +
Sbjct: 320 VEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDT 363
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 2/224 (0%)
Query: 224 LLTKLCLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
L+ LC + +A+K+ M + V P+ +Y+ ++ ALC +G+ A L D
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
D Y+T+I+S + E + ++M +G KPD +TY VL+ G F +
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING-FCVENDSES 311
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
N + +M + + DV+ Y++++ + +E+A LFEDM +G PD ++Y +
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+ +EA+ +LDEM KG P + + + ++ K++
Sbjct: 372 GLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 142/331 (42%), Gaps = 39/331 (11%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAIN-NFDEM 119
Y LI G G DA +F+EM K KP VT+ L G+C++ + A+ D +
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE--------IYSAMVNGYCE 171
+ GV P + +I+ LC +G++ A +L+D++ E IYS +++ +
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFA----FKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
A +N EV + E+S KG + L+ C+
Sbjct: 271 AGRSN-------------EVSM-----------ILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
D A ++L+ M ++P I Y+++L + K + A LF+ RG +PD ++Y
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
+ + C +EA + +M +G KP L + L++++ + +
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQ-KLCESGKLEILSKVISSLH 425
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+ I+ D +SV+I + K D+I L
Sbjct: 426 RG-IAGDADVWSVMIPTMCKEPVISDSIDLL 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 127/336 (37%), Gaps = 30/336 (8%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D YNI+ + G DDA+++ +E+ K + + TLI G C + +A M
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 82 NEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
++M K G +P + Y L +C+ E A DE ++ ++ + +I L
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIK 270
Query: 141 VGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G+ E + +K + Y+ ++NG+C +++
Sbjct: 271 AGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS--------------------- 309
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
E A + E+ KG S +L + +A L E M P + Y
Sbjct: 310 ---ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
IV D LC + + A + D + +G+ P + C L E L
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKL-EILSKVISSLH 425
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
RGI D ++V++ K D I+ + +K+
Sbjct: 426 RGIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKE 461
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 70/135 (51%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E E + +D Y+ + +L K G+ ++ + EE+ K D Y LI G+C++
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ A + +EM KG KPD+++YN++ R + A F++M G P++ +++
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 133 MIIEGLCSVGKVGEA 147
++ +GLC + EA
Sbjct: 368 IVFDGLCEGLQFEEA 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++V +E E G D V YN++ + C + A + +E+ K + D+ Y
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++ + +A Y+F +M +G PD ++Y ++ G+C + A DEM
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 122 DGVEPNSTTHKMIIEGLCSVGK---VGEAEAHFNRLQDKSVEIYSAMVNGYCE 171
G +P + ++ LC GK + + + +R +++S M+ C+
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCK 444
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 165/371 (44%), Gaps = 58/371 (15%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E ++SG LD + +N V +A + G ++DA++ +++ ++ Y TLIKGY + G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 73 NLIDAFYMFNEMKNKG---FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ + + M +G P+I T+NVL C+ + A +ME GV P++
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 130 THK-------------------------------------MIIEGLCSVGKVGEAEAHFN 152
T+ +++ G C G+V +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 153 RLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK-VDLVE------K 201
R+++ VE ++++++NG+ E + + G D+ + + + + V+LV +
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRD---GIDEVTLTLLLMSFNEEVELVGNQKMKVQ 341
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
L E + K D+ + ++ G + KA ++ + M V+P YSI+
Sbjct: 342 VLTLMKECNVKADVITYST---VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAK 398
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
+ K A L ++ + P+VV +TT+I+ +C S+ +A+ +F M + G+ P
Sbjct: 399 GYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSP 457
Query: 322 DVITYTVLLYG 332
++ T+ L++G
Sbjct: 458 NIKTFETLMWG 468
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 181/452 (40%), Gaps = 62/452 (13%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK E+G ++Y + A+ + + E+ LD + +I +
Sbjct: 68 FKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSE 127
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG---VEPN 127
GN+ DA +MK G P TYN L G + + D M +G V PN
Sbjct: 128 SGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPN 187
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDK 183
T ++++ C KV EA ++++ V Y+ + Y +
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG---------- 237
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
E + ++VEK + ++ K + +C ++ C G + ++ +
Sbjct: 238 ------ETVRAESEVVEK---MVMKEKAKPN---GRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 244 MRSLNVEPSQIMYSIVLDALCHV-------------------------GKTKHARSLFDS 278
M+ + VE + ++++ +++ V G K +
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTL 345
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK--- 335
DV+TY+T++N++ +++A +F++M + G+KPD Y++L G +
Sbjct: 346 MKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKE 405
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
A +++ T+ E +VV ++ +I+G + +DA+R+F M G+ P+
Sbjct: 406 PKKAEELLETL-----IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIK 460
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
T+ ++ Y + +A E+L M G+ P
Sbjct: 461 TFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 492
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 156/394 (39%), Gaps = 53/394 (13%)
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
++ T L+ +G +A +F + G +P +++Y L A + + +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEAS 173
E+E G + +S +I G + +A ++++ + Y+ ++ GY
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY---- 160
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVG 232
G P SE+ +L LE N D+ F +L + C
Sbjct: 161 ------GIAGKPERSSEL-----------LDLMLEEGNV-DVGPNIRTFNVLVQAWCKKK 202
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARS-LFDSFVGR-GFTPDVVT 290
+ +A ++++ M V P + Y+ + G+T A S + + V + P+ T
Sbjct: 203 KVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRT 262
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG------------------ 332
++ YCR +++ L + MK ++ +++ + L+ G
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL 322
Query: 333 --SFKNAAAL----DVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
SF L + + MK+ + DV+ YS ++N E A ++F++M+
Sbjct: 323 LMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 382
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
G++PD Y+ + Y + K+A ELL+ +
Sbjct: 383 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL 416
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 16/168 (9%)
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV----- 342
V + T ++N EA +F+ + G +P +I+YT LL AA+ V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLL-------AAMTVQKQYG 97
Query: 343 -INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
I++I +++Q+ LD + ++ +IN ++ N EDA++ M + GL P TY +I
Sbjct: 98 SISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI 157
Query: 402 SLYYKKGLMKEASELLDEMSSKG---MTPSSHIISAVNRSILKARKVQ 446
Y G + +SELLD M +G + P+ + + ++ K +KV+
Sbjct: 158 KGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVE 205
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FKE ++G+ D AY+I+ + + A E+ E L V++ ++ +TT+I G+C
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 436
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ DA +FN+M G P+I T+ L G + A M GV+P ++T
Sbjct: 437 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 496
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI 161
++ E G E+ N L+ K +EI
Sbjct: 497 FLLLAEAWRVAGLTDESNKAINALKCKDIEI 527
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 6/183 (3%)
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+KL +T ++P ++I++ C K AR++ D FTPDVVTYT+ + +
Sbjct: 263 LKLFDT-----IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEA 317
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL 357
YC+ + ++ ++M+ G P+V+TYT++++ K+ + + ++ MK+
Sbjct: 318 YCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG-VYEKMKEDGCVP 376
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
D YS LI+ L KT ++DA +FEDM ++G+ D + Y MIS + A LL
Sbjct: 377 DAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLL 436
Query: 418 DEM 420
M
Sbjct: 437 KRM 439
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 176/430 (40%), Gaps = 40/430 (9%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL----RVKNIDLDIKHYTTLIKGYCLQ 71
++G G YN + D L K D E+ E+ K + LD + +++
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT--MSKVMRRLAKS 216
Query: 72 GNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G A F EM K+ G K D + N L + + + A F ++ D ++P++ T
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDART 275
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
++I G C K +A A + ++ V Y++ V YC+ GD
Sbjct: 276 FNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-------GD----- 323
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRS 246
+ E+ E+ G + ++ L + +A+ + E M+
Sbjct: 324 ------------FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKE 371
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
P YS ++ L G+ K A +F+ +G DV+ Y TMI++ + +
Sbjct: 372 DGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEM 431
Query: 307 ALDLFQDMKRR---GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
AL L + M+ P+V TY LL + + ++ + M + ++S+DV Y
Sbjct: 432 ALRLLKRMEDEEGESCSPNVETYAPLLKMC-CHKKKMKLLGILLHHMVKNDVSIDVSTYI 490
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
+LI GL + E+A FE+ + KG+ P T ++ KK + + ++ + SK
Sbjct: 491 LLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSK 550
Query: 424 GMTPSSHIIS 433
M S +S
Sbjct: 551 TMIDSHSPLS 560
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 257 SIVLDALCHVGKTKHARSLFDSFV----GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
S V+ L GK A D+F+ G D + +++++ + NS++ A ++F
Sbjct: 207 SKVMRRLAKSGKYNKA---VDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFL 263
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
+ IKPD T+ +L++G F A D + MK TE + DVV Y+ + K
Sbjct: 264 KL-FDTIKPDARTFNILIHG-FCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE 321
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS--- 429
++ + E+M + G P+ VTYT ++ K + EA + ++M G P +
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 430 ----HIISAVNR 437
HI+S R
Sbjct: 382 SSLIHILSKTGR 393
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
T + ++ + +A+D F +M++ G+K D I L+ K + ++ + ++
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENS-IEHAHEVFL 263
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
+ T I D +++LI+G K ++DA + + M PD VTYT + Y K+G
Sbjct: 264 KLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ +E+L+EM G P+ + V S+ K+++V
Sbjct: 323 DFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 38/175 (21%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+E +E+G + V Y IV +L K +V +A+ + E+++ D K Y++LI
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE---PN 127
G DA +F +M N+G + D++ YN + + + +A+ ME + E PN
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 128 STT---------------------HKMI--------------IEGLCSVGKVGEA 147
T H M+ I GLC GKV EA
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 175/411 (42%), Gaps = 38/411 (9%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
AY++ D L K K D E E +R + + + +++ + G +A +F+ +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 85 KNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
G + + + N+L +C R ++ARV + + PN+ T + I G C
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKA 237
Query: 142 GKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
+V EA ++ V Y+ ++ YC+ + +
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-----------------------QFE 274
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+ K YE+ E+ G + +++ L + +A+++ M+ +P + Y+
Sbjct: 275 FI-KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 258 IVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++ L G+ + A +F + G + + TY +MI YC + +A++L ++M+
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 317 RGI-KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+ PDV TY LL FK ++V + + + +SLD Y+ LI L + +
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
E A LFE+MI + + P T ++ KK + + A + M + +T
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLT 504
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
E+A +F L G ES LL LC + +A +L ++S ++ P+ ++I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIF 230
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ C + + A G GF P V++YTT+I YC+ + ++ +M+ G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
P+ ITYT ++ S + + MK++ D + Y+ LI+ L + E+A
Sbjct: 291 PPNSITYTTIM-SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 380 RLFE-DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TPSSHIISAVNR 437
R+F +M + G+ + TY MI++Y +A ELL EM S + P H + R
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 438 SILK 441
S K
Sbjct: 410 SCFK 413
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 148/355 (41%), Gaps = 56/355 (15%)
Query: 93 IVTYNVLAAGVCR---NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEA 149
+VT N +A + R E A+ FD + G+E N+ + ++++ LC +V +A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 150 HFNRLQDK---SVEIYSAMVNGYCEASNNNNNY-------GDDKSPTPISEVG----YCK 195
+L+ + ++ ++G+C+A+ G P IS YC+
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
K YE+ E+ G + +++ L + +A+++ M+ +P +
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+ ++ L G+ + A +F + G + + TY +MI YC + +A++L ++M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 315 KRRGI-KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
+ + PDV TY LL FK DVV
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRG--------------------DVV------------- 418
Query: 374 NYEDAIRLFEDMIDKG-LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ +L ++M+ K L D+ TYT +I + + + A L +EM S+ +TP
Sbjct: 419 ---EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 175/411 (42%), Gaps = 38/411 (9%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
AY++ D L K K D E E +R + + + +++ + G +A +F+ +
Sbjct: 123 AYDMAVDILGKAKKWDRMKEFVERMRGDKL-VTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 85 KNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
G + + + N+L +C R ++ARV + + PN+ T + I G C
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL----KSHITPNAHTFNIFIHGWCKA 237
Query: 142 GKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
+V EA ++ V Y+ ++ YC+ + +
Sbjct: 238 NRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-----------------------QFE 274
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+ K YE+ E+ G + +++ L + +A+++ M+ +P + Y+
Sbjct: 275 FI-KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 258 IVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
++ L G+ + A +F + G + + TY +MI YC + +A++L ++M+
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 317 RGI-KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+ PDV TY LL FK ++V + + + +SLD Y+ LI L + +
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
E A LFE+MI + + P T ++ KK + + A + M + +T
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLT 504
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 4/244 (1%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
E+A +F L G ES LL LC + +A +L ++S ++ P+ ++I
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAHTFNIF 230
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ C + + A G GF P V++YTT+I YC+ + ++ +M+ G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
P+ ITYT ++ S + + MK++ D + Y+ LI+ L + E+A
Sbjct: 291 PPNSITYTTIM-SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAE 349
Query: 380 RLFE-DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TPSSHIISAVNR 437
R+F +M + G+ + TY MI++Y +A ELL EM S + P H + R
Sbjct: 350 RVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLR 409
Query: 438 SILK 441
S K
Sbjct: 410 SCFK 413
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 148/355 (41%), Gaps = 56/355 (15%)
Query: 93 IVTYNVLAAGVCR---NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEA 149
+VT N +A + R E A+ FD + G+E N+ + ++++ LC +V +A
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARV 211
Query: 150 HFNRLQDK---SVEIYSAMVNGYCEASNNNNNY-------GDDKSPTPISEVG----YCK 195
+L+ + ++ ++G+C+A+ G P IS YC+
Sbjct: 212 VLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ 271
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
K YE+ E+ G + +++ L + +A+++ M+ +P +
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLF 331
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+ ++ L G+ + A +F + G + + TY +MI YC + +A++L ++M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 315 KRRGI-KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
+ + PDV TY LL FK DVV
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRG--------------------DVV------------- 418
Query: 374 NYEDAIRLFEDMIDKG-LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ +L ++M+ K L D+ TYT +I + + + A L +EM S+ +TP
Sbjct: 419 ---EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 39/356 (10%)
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A ++ MK G KPD TYN + + +E V + + G+E + + +I
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
G+VG A F+ + ++ +++M++GY SE GY K
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGY-------------------SEAGYAK- 215
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR-SLNVEPSQIM 255
A +LF ++ +G E + +L +GD+ + +LLE M + + S +
Sbjct: 216 ----DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDL-RTGRLLEEMAITKKIGLSTFL 270
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
S ++ G AR +F+ + + D V +T MI Y + EA LF +M+
Sbjct: 271 GSKLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEME 326
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+ G+ PD T + +L + + AL++ I + + ++ + L++ K
Sbjct: 327 KTGVSPDAGTLSTVL-SACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRV 385
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
E+A+R+FE M K ++ T+ MI+ Y +G KEA L D MS P S I
Sbjct: 386 EEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRMS----VPPSDI 433
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 132/330 (40%), Gaps = 35/330 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G D +D F++ +E G D + A LG + + E K I L
Sbjct: 212 GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLG 271
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ LI Y G+L A +FN+M K D V + + +N ++ A F EME
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEK 327
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
GV P++ T + L + G VG E K +E +++ E S +N Y
Sbjct: 328 TGVSPDAGTLSTV---LSACGSVGALEL------GKQIETHAS------ELSLQHNIY-- 370
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
T + ++ Y K VE+A +F + + E + ++T G +A+ L
Sbjct: 371 --VATGLVDM-YGKCGRVEEALRVFEAMP----VKNEATWNAMITAYAHQGHAKEALLLF 423
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCR 300
+ M +V PS I + VL A H G F G P + YT +I+ R
Sbjct: 424 DRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSR 480
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
L EA + M+R KPD I +L
Sbjct: 481 AGMLDEAWEF---MERFPGKPDEIMLAAIL 507
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 179/441 (40%), Gaps = 42/441 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ K SG+ D YN VF A KL ++ + L ++ D+ +LI Y
Sbjct: 120 YRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAK 179
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G + A +F+E+ + D V++N + +G A+ A++ F +ME +G EP+ T
Sbjct: 180 CGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
++ G CS H L+ + A+ ++ + IS
Sbjct: 236 LVSML-GACS---------HLGDLRTGRLLEEMAITKKIGLSTFLGSKL--------ISM 277
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
G C DL + A +F ++ K +A ++T G +A KL M V
Sbjct: 278 YGKCG-DL-DSARRVFNQMIKKDRVAWT----AMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P S VL A VG + + + ++ T +++ Y + ++EAL +
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR-DMKQTEISLDVVCYSVLINGL 369
F+ M + + T+ ++ A + + R + ++I+ V + + GL
Sbjct: 392 FEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGL 447
Query: 370 MKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ R F +M GL P YT++I L + G++ EA E ++ K P
Sbjct: 448 V-----HQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PD 499
Query: 429 SHIISAVNRSILKARKVQFHE 449
+++A+ + K + V E
Sbjct: 500 EIMLAAILGACHKRKDVAIRE 520
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 286 PDVVTYTTMINSYCR-MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
P+ ++ MI N + AL L++ MK G+KPD TY + K + V
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK-LEEIGVGR 152
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
++ + + + DV LI K A +LF+++ ++ D V++ MIS Y
Sbjct: 153 SVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGY 208
Query: 405 YKKGLMKEASELLDEMSSKGMTP 427
+ G K+A +L +M +G P
Sbjct: 209 SEAGYAKDAMDLFRKMEEEGFEP 231
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 43/420 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + V+ KE ++ G+ V +NI+ +LGK D A+++ +++ I D+ +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVT-YNVLAAGVCRNDEARVAINNFDEME 120
T +I G G A MF +M G P+ VT + ++A C IN E+
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK-----VINQGSEVH 375
Query: 121 SDGVEPNSTTHKMIIEGLCSV----GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
S V+ ++ L + GK+ +A F+ +++K V +++M+ GYC+A
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA---- 431
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
GYC KAYELF + + + +++ GD G+
Sbjct: 432 ---------------GYCG-----KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 237 AMKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
AM L + M + V+ + +++++ GK A LF F P+ VT +++
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ + K ++ + RR + + L ++ + ++ TI+ M+
Sbjct: 532 PACANLLGAKMVREIHGCVLRRNLDA-IHAVKNALTDTYAKSGDIEYSRTIFLGME---- 586
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ D++ ++ LI G + +Y A+ LF M +G+ P++ T + +I + GLM E
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH---GLMGNVDE 643
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 144/325 (44%), Gaps = 33/325 (10%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G D + N + D K GK++DA ++ + ++ K D+ + ++I GYC G A
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKA 437
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG-VEPNSTTHKMIIE 136
+ +F M++ +P+I+T+N + +G +N + A++ F ME DG V+ N+ T +II
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 137 GLCSVGKVGEA-----EAHFNRLQDKSVEIYSAM--------------VNGYCEASNNNN 177
G GK EA + F+R SV I S + ++G N +
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+ + T Y K +E + +FL + K DI S L+ L G G A
Sbjct: 558 IHAVKNALTDT----YAKSGDIEYSRTIFLGMETK-DIITWNS---LIGGYVLHGSYGPA 609
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTYTTMIN 296
+ L M++ + P++ S ++ A +G + +F S P + + M+
Sbjct: 610 LALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVY 669
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKP 321
Y R N L+EAL Q+M + P
Sbjct: 670 LYGRANRLEEALQFIQEMNIQSETP 694
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 179/425 (42%), Gaps = 29/425 (6%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + K G++D A + +R + D+ + +++ YC G +A + EM+
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+G P +VT+N+L G + + A++ +ME+ G+ + T +I GL G +
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 147 AEAHFNRL-----QDKSVEIYSAMVNGYCEASNNNNN----------YGDDKSPTPISEV 191
A F ++ +V I SA+ C N + + DD
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
Y K +E A ++F + NK D+ S ++T C G GKA +L M+ N+ P
Sbjct: 396 MYSKCGKLEDARKVFDSVKNK-DVYTWNS---MITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRG-FTPDVVTYTTMINSYCRMNSLKEALDL 310
+ I ++ ++ G A LF G + T+ +I Y + EAL+L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
F+ M+ P+ +T LL + N ++ I + + + + L +
Sbjct: 512 FRKMQFSRFMPNSVTILSLL-PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
K+ + E + +F M K D +T+ +I Y G A L ++M ++G+TP+
Sbjct: 571 KSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRG 626
Query: 431 IISAV 435
+S++
Sbjct: 627 TLSSI 631
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 175/450 (38%), Gaps = 75/450 (16%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKG-----YCLQGNLIDAFYMFNEMKNKGFKP 91
KV+++ E+ + R KN+ K +I C G+L++A + + +G K
Sbjct: 20 AKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKV 79
Query: 92 DIVTYNVLAAGVCRNDE---ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
TY L + R+ F EP+ ++ G + +A
Sbjct: 80 KRSTYLKLLESCIDSGSIHLGRILHARFGLF----TEPDVFVETKLLSMYAKCGCIADAR 135
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLE 208
F+ ++++++ +SAM+ Y S N K + + G D + ++
Sbjct: 136 KVFDSMRERNLFTWSAMIGAY---SRENRWREVAKLFRLMMKDGVLPDDFLFP--KILQG 190
Query: 209 LSNKGDIAKEESCFKLLTKL----CL------------VGDIGKAMKLLETMRSLNVEPS 252
+N GD+ + ++ KL CL G++ A K MR +V
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV--- 247
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
I ++ VL A C GK + A L G +P +VT+ +I Y ++ A+DL Q
Sbjct: 248 -IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQ 306
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIW---------------------- 347
M+ GI DV T+T ++ G N ALD+ ++
Sbjct: 307 KMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLK 366
Query: 348 -----RDMKQTEISL----DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
++ + + DV+ + L++ K EDA ++F+ + +K D T+
Sbjct: 367 VINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWN 422
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTPS 428
MI+ Y + G +A EL M + P+
Sbjct: 423 SMITGYCQAGYCGKAYELFTRMQDANLRPN 452
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 3/241 (1%)
Query: 204 ELFLELSNK-GDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
E LE NK +++KE +++ VG A K+ + M N + + + ++ +L+A
Sbjct: 91 EEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA 150
Query: 263 LCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
+ K +F G+ PDV +Y T+I C S EA+ L +++ +G+KP
Sbjct: 151 CVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKP 210
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
D IT+ +LL+ S+ + IW M + + D+ Y+ + GL + E+ + L
Sbjct: 211 DHITFNILLHESY-TKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSL 269
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILK 441
F+ + L+PD T+T MI + +G + EA E+ G P + +++ +I K
Sbjct: 270 FDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICK 329
Query: 442 A 442
A
Sbjct: 330 A 330
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQ 253
K DLVE +F EL K I + + + L K LC G +A+ L++ + + ++P
Sbjct: 156 KFDLVEG---IFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDH 212
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
I ++I+L GK + ++ V + D+ +Y + N +E + LF
Sbjct: 213 ITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDK 272
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
+K +KPDV T+T ++ G F + LD T ++++++ ++ L+ + K
Sbjct: 273 LKGNELKPDVFTFTAMIKG-FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
+ E A L +++ K L D+ +++ K EA E+++
Sbjct: 332 DLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 40/219 (18%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIK 59
+GM + F E E +++N + +A K D + +EL K +I+ D+
Sbjct: 119 VGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAA------------------ 101
Y TLIKG C +G+ +A + +E++NKG KPD +T+N+L
Sbjct: 179 SYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM 238
Query: 102 -----------------GVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
G+ +++ ++ FD+++ + ++P+ T +I+G S GK+
Sbjct: 239 VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKL 298
Query: 145 GEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY 179
EA + ++ ++++++ C+A + + Y
Sbjct: 299 DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAY 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 8/175 (4%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ V E + G+ D + +NI+ GK ++ ++ + KN+ DI+ Y
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ G ++ + +F+++K KPD+ T+ + G + AI + E+E
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEK 310
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEA-----EAHFNRLQ-DKSV--EIYSAMVNG 168
+G P ++ +C G + A E RL D++V E+ A+V G
Sbjct: 311 NGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKG 365
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 178/407 (43%), Gaps = 59/407 (14%)
Query: 55 DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAIN 114
D ++ + +++ Y G + DA + +EM+ G KPDIVT+N L +G ++ AI
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVG--KVGEAEAHFNRLQDKSVEIYSAMVNGYCEA 172
M+ G++P++++ +++ + G K+G+A ++GY
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA------------------IHGYIL- 252
Query: 173 SNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG 232
N + D T + ++ Y K + A +F ++ + +I S L+ CL+
Sbjct: 253 --RNQLWYDVYVETTLIDM-YIKTGYLPYARMVF-DMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
D A L+ M ++P I ++ + +GK + A + +G P+VV++T
Sbjct: 309 D---AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----------------YGSFK 335
+ + + + + AL +F M+ G+ P+ T + LL + K
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 336 NAAALDVINTIWRDMK------QTEISL-------DVVCYSVLINGLMKTDNYEDAIRLF 382
N + T DM Q+ I + + ++ ++ G E+ I F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTPS 428
M++ G+EPD +T+T ++S+ GL++E + D M S+ G+ P+
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPT 532
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 170/422 (40%), Gaps = 42/422 (9%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
VA+N + L + DA + + + I D + +L GY G A + +
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
MK KG P++V++ + +G +N R A+ F +M+ +GV PN+ T +++ L +
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSL 411
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ + V+G+C N D T + ++ Y K ++ A
Sbjct: 412 LHSGKE----------------VHGFCL---RKNLICDAYVATALVDM-YGKSGDLQSAI 451
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
E+F + NK +C +L + G + + M +EP I ++ VL
Sbjct: 452 EIFWGIKNKS--LASWNC--MLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVC 507
Query: 264 CHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
+ G + FD R G P + + M++ R L EA D Q M +KPD
Sbjct: 508 KNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS---LKPD 564
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+ L S K L++ W+ ++ E + Y ++IN + +ED R+
Sbjct: 565 ATIWGAFL-SSCKIHRDLELAEIAWKRLQVLEPH-NSANYMMMINLYSNLNRWEDVERIR 622
Query: 383 EDMIDKGLE-PDKVTYTDM---ISLYYKKG--------LMKEASELLDEMSSKGMTPSSH 430
M + + D ++ + + ++Y +G + E +L+ EM G P +
Sbjct: 623 NLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS 682
Query: 431 II 432
I
Sbjct: 683 CI 684
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 70/402 (17%)
Query: 72 GNLIDAFYMFNEMKNKGFKP-DIVTYNVLAAGVCRNDEARV---AINNFDEMESDGVEPN 127
GN A +F EM+ G K D +L VC N E I+ + + G+E N
Sbjct: 68 GNWEKAVELFREMQFSGAKAYDSTMVKLLQ--VCSNKEGFAEGRQIHGY--VLRLGLESN 123
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
+ +I GK+ + FN ++D+++ ++++++ Y + Y DD +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL-----GYVDD-AIGL 177
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
+ E+ C + K DI S LL+ G A+ +L+ M+
Sbjct: 178 LDEMEICGL---------------KPDIVTWNS---LLSGYASKGLSKDAIAVLKRMQIA 219
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHAR-------------------SLFDSFVGRGFTP-- 286
++PS S +L A+ G K + +L D ++ G+ P
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 287 ----------DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF-- 334
++V + ++++ LK+A L M++ GIKPD IT+ L G
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 335 -KNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
K ALDVI MK+ ++ +VV ++ + +G K N+ +A+++F M ++G+ P+
Sbjct: 340 GKPEKALDVIG----KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPN 395
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
T + ++ + L+ E+ K + +++ +A+
Sbjct: 396 AATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 111/241 (46%), Gaps = 5/241 (2%)
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
EKA ELF E+ G A + + KLL + ++ + L +E + M + +
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+ GK + +R +F+S R + ++ ++++SY ++ + +A+ L +M+ G+
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
KPD++T+ LL G + D I + + M+ + S L+ + + + +
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVL-KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSI 439
+ ++ L D T +I +Y K G + A + D M +K + + ++S ++ +
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 440 L 440
L
Sbjct: 306 L 306
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 171/403 (42%), Gaps = 31/403 (7%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRV-KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
AY V L K ++++ + L V + D + +I Y G + +A +F +
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFK 133
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEA-RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
+ N P T N L + R ++ + + GV +T ++I+ LC +G
Sbjct: 134 IPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIG 193
Query: 143 KVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
+V A + SV +YS +++ C+ K + +GY
Sbjct: 194 EVDCATELVRYMSQDSVIVDPRLYSRLLSSVCK----------HKDSSCFDVIGY----- 238
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLNVEPSQIMYS 257
LE K + + ++ + + G GK + +L M+ VEP + Y+
Sbjct: 239 --------LEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
IVL + A LFD + G PDV TY IN C+ N ++ AL + M +
Sbjct: 291 IVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKL 350
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
G +P+V+TY +L+ K A L T+W++M+ ++ + + ++I+ ++ D
Sbjct: 351 GSEPNVVTYNILIKALVK-AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVC 409
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
A L E+ + + ++IS +KGLM +A ELL +
Sbjct: 410 AHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 14/221 (6%)
Query: 218 EESCFKLLT-KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
EES F +L LC +G++ A +L+ M +V +YS +L ++C KH S
Sbjct: 178 EESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVC-----KHKDSSC 232
Query: 277 DSFVG-------RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
+G F+P + YT ++ KE + + MK ++PD++ YT++
Sbjct: 233 FDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIV 292
Query: 330 LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
L G + + ++ ++ ++ DV Y+V INGL K ++ E A+++ M G
Sbjct: 293 LQGVIADEDYPKA-DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 390 LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
EP+ VTY +I K G + A L EM + G+ +SH
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSH 392
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/306 (18%), Positives = 121/306 (39%), Gaps = 72/306 (23%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ--GNLI 75
G+ L+ + I+ DALC++G+VD A E+ + ++ +D + Y+ L+ C +
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
D +++ F P + Y V+ + + ++ ++M+ D VEP+ + +++
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293
Query: 136 EGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+G+ + +A+ F+ L V Y+ +NG C+
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCK-------------------- 333
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
+ DI E K+++ + +G EP
Sbjct: 334 --------------------QNDI---EGALKMMSSMNKLGS----------------EP 354
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY-------CRMNSL 304
+ + Y+I++ AL G A++L+ G + T+ MI++Y C L
Sbjct: 355 NVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLL 414
Query: 305 KEALDL 310
+EA ++
Sbjct: 415 EEAFNM 420
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G +VV + K + D V Y IV + A ++ +EL + + D+ Y
Sbjct: 265 GRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTY 324
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
I G C Q ++ A M + M G +P++VTYN+L + + + A + EME+
Sbjct: 325 NVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Query: 122 DGVEPNSTTHKMIIEGLCSVGKV----GEAEAHFN 152
+GV NS T ++I V +V G E FN
Sbjct: 385 NGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 4/224 (1%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL-ETMRSLNVEPSQIMY 256
+ E A++LF E+ +S LL+ + +AMK E L + P + Y
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+ ++ ALC G S+F+ GF PD++++ T++ + R E ++ MK
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE-ISLDVVCYSVLINGLMKTDNY 375
+ + P++ +Y + G +N D +N I D+ +TE IS DV Y+ LI +N
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLI--DVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
E+ ++ + +M +KGL PD VTY +I L KKG + A E+ +E
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 37/199 (18%)
Query: 265 HVGKTKHARSLFD-------------------SFVGR-----------------GFTPDV 288
+ G +HA LFD ++V G TPD+
Sbjct: 134 YSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDL 193
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWR 348
VTY TMI + CR S+ + L +F+++++ G +PD+I++ LL ++ ++ + IW
Sbjct: 194 VTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEG-DRIWD 252
Query: 349 DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
MK +S ++ Y+ + GL + + DA+ L + M +G+ PD TY +I+ Y
Sbjct: 253 LMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDN 312
Query: 409 LMKEASELLDEMSSKGMTP 427
++E + +EM KG+TP
Sbjct: 313 NLEEVMKCYNEMKEKGLTP 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Query: 6 DVVDKFKEFKES-GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
+ + FKE E G+ D V YN + ALC+ G +DD + + EEL + D+ + TL
Sbjct: 175 EAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTL 234
Query: 65 IKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
++ + + ++ +++ MK+K P+I +YN G+ RN + A+N D M+++G+
Sbjct: 235 LEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGI 294
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV 159
P+ T+ +I + E +N +++K +
Sbjct: 295 SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 141/331 (42%), Gaps = 69/331 (20%)
Query: 8 VDKFKEFKESGMF--LDGV--AYNIVFDALCKLGKVDDAIEMREELR-VKNIDLDIKHYT 62
V+KFK ES F + G+ A+ K +D+ ++ +++ +K+ D I+
Sbjct: 71 VEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR--I 128
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-ES 121
L+ GY G A +F+EM + + ++N L + + + A+ F E+ E
Sbjct: 129 MLLYGYS--GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P+ T+ +I+ LC G + + + F L+ NG+
Sbjct: 187 LGITPDLVTYNTMIKALCRKGSMDDILSIFEELEK----------NGF------------ 224
Query: 182 DKSPTPISEVGYCKVDLVEKAY--ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
P IS L+E+ Y ELF+E GD +
Sbjct: 225 --EPDLISFNT-----LLEEFYRRELFVE-----------------------GD-----R 249
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+ + M+S N+ P+ Y+ + L K A +L D G +PDV TY +I +Y
Sbjct: 250 IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYR 309
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
N+L+E + + +MK +G+ PD +TY +L+
Sbjct: 310 VDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
+YN L + K DA+ + + ++ + I D+ Y LI Y + NL + +NEM
Sbjct: 265 SYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
K KG PD VTY +L +C+ + A+ +E + +K ++E L GK+
Sbjct: 325 KEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKI 384
Query: 145 GEA 147
EA
Sbjct: 385 DEA 387
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
D V ++ Y M + A LF +M + V ++ LL ++ N+ LD
Sbjct: 123 DFVIRIMLLYGYSGM--AEHAHKLFDEMPELNCERTVKSFNALL-SAYVNSKKLDEAMKT 179
Query: 347 WRDMKQT-EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
++++ + I+ D+V Y+ +I L + + +D + +FE++ G EPD +++ ++ +Y
Sbjct: 180 FKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFY 239
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
++ L E + D M SK ++P+ ++ R + + +K
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 91/232 (39%), Gaps = 21/232 (9%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK-GFKPDIVT 95
G + A ++ +E+ N + +K + L+ Y L +A F E+ K G PD+VT
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 96 YNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
YN + +CR ++ F+E+E +G EP+ + ++E E + ++ ++
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMK 255
Query: 156 DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDI 215
K++ N N + D A L + +G
Sbjct: 256 SKNLSPNIRSYNSRVRGLTRNKKFTD--------------------ALNLIDVMKTEGIS 295
Query: 216 AKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG 267
+ L+T + ++ + MK M+ + P + Y +++ LC G
Sbjct: 296 PDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 2/240 (0%)
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
E+ E D++KE ++++ G A K+ E M + + + S + ++ +L A
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY 154
Query: 264 CHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
K LF+ G+ PD+V+Y T+I + C +SL EA+ L +++ +G+KPD
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
++T+ LL S+ ++ IW M + +++D+ Y+ + GL ++ + LF
Sbjct: 215 IVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLF 273
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
++ GL+PD ++ MI +G M EA E+ G P + + ++ KA
Sbjct: 274 GELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKA 333
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V+YN + ALC+ + +A+ + +E+ K + DI + TL+ L+G ++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
+M K DI TYN G+ +++ +N F E+++ G++P+ + +I G +
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
GK+ EAEA + + + Y DK+ + CK E
Sbjct: 299 GKMDEAEAWYKEIV--------------------KHGYRPDKATFALLLPAMCKAGDFES 338
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKL 228
A ELF E +K + + + +L+ +L
Sbjct: 339 AIELFKETFSKRYLVGQTTLQQLVDEL 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 25/289 (8%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+++++ K++++ M +G A I+ K G ++A ++ EE+ ++ + + L+
Sbjct: 95 EILEEQKKYRD--MSKEGFAARII-SLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL 151
Query: 66 KGYCLQGNLIDAFYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
Y L +FNE+ K KPDIV+YN L +C D A+ DE+E+ G+
Sbjct: 152 SAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL 211
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNN---N 177
+P+ T ++ G+ E + ++ +K+V I Y+A + G + + N
Sbjct: 212 KPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 178 NYGDDKS----PTPIS-------EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
+G+ K+ P S + K+D E Y+ ++ + D A + LL
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA---TFALLLP 328
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSL 275
+C GD A++L + S Q ++D L K + A +
Sbjct: 329 AMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/380 (20%), Positives = 159/380 (41%), Gaps = 36/380 (9%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D+ + T++ GY GNL +A + + E + G K + ++ L ++ + ++
Sbjct: 143 DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAH 202
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
++ G N II+ G++ A+ F+ + K + I++ +++GY +
Sbjct: 203 GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAK----- 257
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
GD +E A +LF E+ K + S L+ G +
Sbjct: 258 --LGD-----------------MEAAEKLFCEMPEKNPV----SWTALIAGYVRQGSGNR 294
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
A+ L M +L V+P Q +S L A + +H + + + P+ + +++I+
Sbjct: 295 ALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLID 354
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
Y + SL+ + +F+ K D + + ++ ++ + + DM + +
Sbjct: 355 MYSKSGSLEASERVFRICDD---KHDCVFWNTMISALAQHGLGHKALRML-DDMIKFRVQ 410
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDM-IDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ V++N + E+ +R FE M + G+ PD+ Y +I L + G KE
Sbjct: 411 PNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMR 470
Query: 416 LLDEMSSKGMTPSSHIISAV 435
++EM P HI +A+
Sbjct: 471 KIEEMP---FEPDKHIWNAI 487
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G AR +FDS R DVV++ TM+ Y + +L EAL +++ +R GIK + ++
Sbjct: 127 GMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSF 182
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
LL K + L + + +VV +I+ K E A R F++M
Sbjct: 183 AGLLTACVK-SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
K D +T +IS Y K G M+ A +L EM K + +I+ R
Sbjct: 242 VK----DIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 32/326 (9%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ESGM D Y + + K GKVD E+ ++ ++ ++ + LI G G +
Sbjct: 494 QESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQV 553
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM--ESDGVEPNSTTHK 132
AF + +++K KPD V +N L + ++ A + EM E+ ++P+ +
Sbjct: 554 AKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIG 613
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+++ C+ G+V A+ + + + E+Y+ VN C S GD
Sbjct: 614 ALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNS-CSKS------GD------- 659
Query: 189 SEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD-IGKAMKLLETMRSL 247
+ A ++ ++ K D+ +E F L + + +A +L+ +S
Sbjct: 660 ----------WDFACSIYKDMKEK-DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQ 708
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+ I YS ++ A C+ K A L++ P + T +I + C N L +A
Sbjct: 709 GIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKA 768
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGS 333
++ ++K G+KP+ ITY++L+ S
Sbjct: 769 MEYLDEIKTLGLKPNTITYSMLMLAS 794
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 178/407 (43%), Gaps = 34/407 (8%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNI-DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK 87
++ L + G++ D I + E+L +++ D+D ++ + K Q + +AF + N
Sbjct: 406 AYNRLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLILN- 464
Query: 88 GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA 147
P + T+N+L + + + A ++ G+ + + +I GKV
Sbjct: 465 ---PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKV--- 518
Query: 148 EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFL 207
D E++ M N EA N + +G G + V KA+ +
Sbjct: 519 --------DAMFEVFHQMSNSGVEA--NLHTFGALID-------GCARAGQVAKAFGAYG 561
Query: 208 ELSNKGDIAKEESCFKLLTKLC-LVGDIGKAMKLLETMRSLN--VEPSQIMYSIVLDALC 264
L +K ++ + F L C G + +A +L M++ ++P I ++ A C
Sbjct: 562 ILRSK-NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 265 HVGKTKHARSLFDSFVGRGF--TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
+ G+ + A+ ++ G TP+V YT +NS + A +++DMK + + PD
Sbjct: 621 NAGQVERAKEVYQMIHKYGIRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
+ ++ L+ + +A LD I +D K I L + YS L+ +++ A+ L+
Sbjct: 679 EVFFSALIDVA-GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELY 737
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
E + L P T +I+ + + +A E LDE+ + G+ P++
Sbjct: 738 EKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 126/321 (39%), Gaps = 32/321 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + SG+ + + + D + G+V A LR KN+ D + LI C
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISA-CG 583
Query: 71 QGNLID-AFYMFNEMK--NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
Q +D AF + EMK PD ++ L C + A + + G+
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDK 183
+ + + G A + + +++K V +SA+++
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID---------------- 687
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
G+ K ++++A+ + + ++G S L+ C D KA++L E
Sbjct: 688 ------VAGHAK--MLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
++S+ + P+ + ++ ALC + A D G P+ +TY+ ++ + R +
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 304 LKEALDLFQDMKRRGIKPDVI 324
+ + L K G+ P++I
Sbjct: 800 FEVSFKLLSQAKGDGVSPNLI 820
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 14/190 (7%)
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
+ + MR N++ Y+I++ LC GK A ++F + + G PDV TY MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
R +SL A L+ +M RRG+ PD ITY +++G K N + + K +S
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQ-------NKLAQARK---VSKSC 106
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
++ LING K +D + LF +M +G+ + +TYT +I + + G A ++ E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 420 MSSKGMTPSS 429
M S G+ SS
Sbjct: 167 MVSNGVYSSS 176
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 33/232 (14%)
Query: 45 MREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVC 104
M + +R N+D+D Y +I G C G +A +F + G +PD+ TYN++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 105 RNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSA 164
R A + EM G+ P++ T+ +I GLC K+ +A R KS ++
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA-----RKVSKSCSTFNT 111
Query: 165 MVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
++NGYC+A+ V+ LF E+ +G +A + L
Sbjct: 112 LINGYCKATR------------------------VKDGMNLFCEMYRRGIVANVITYTTL 147
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
+ VGD A+ + + M S V S I + +L LC + + A ++
Sbjct: 148 IHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 50/231 (21%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
G CK ++A +F L G + + + ++ + +G+A KL M + P
Sbjct: 23 GLCKAGKFDEAGNIFTNLLISG-LQPDVQTYNMMIRF---SSLGRAEKLYAEMIRRGLVP 78
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
I Y+ ++ LC K AR + + T+ T+IN YC+ +K+ ++LF
Sbjct: 79 DTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDGMNLF 129
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+M RRGI +VITYT L I+G +
Sbjct: 130 CEMYRRGIVANVITYTTL------------------------------------IHGFRQ 153
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMI-SLYYKKGLMKEASELLDEMS 421
++ A+ +F++M+ G+ +T+ D++ L +K L K + LL + S
Sbjct: 154 VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSS 204
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 9/139 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ E G+ D + YN + LCK K+ A + + + TLI GYC
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFNTLINGYCK 118
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ D +F EM +G +++TY L G + + A++ F EM S+GV +S T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 131 HKMIIEGLCSVGKVGEAEA 149
+ I+ LCS ++ +A A
Sbjct: 179 FRDILPQLCSRKELRKAVA 197
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+++ M+++ + +D Y+++I+GL K +++A +F +++ GL+PD TY MI
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
+ A +L EM +G+ P + +++ + K K+
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKL 96
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 162/410 (39%), Gaps = 77/410 (18%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI-KGYC 69
F + + G+ L+ + + + C+ + + + + +E++ N++++ LI C
Sbjct: 175 FVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLC 234
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME-------SD 122
+DAFY+ E++N KPD + Y V+A EA V N E +
Sbjct: 235 KCSREMDAFYILEELRNIDCKPDFMAYRVIA-------EAFVVTGNLYERQVVLKKKRKL 287
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
GV P S+ ++ I L S ++ EA+ E+ +V+G N D
Sbjct: 288 GVAPRSSDYRAFILDLISAKRLTEAK-----------EVAEVIVSGKFPMDN-------D 329
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
I V D A E + + + G + + KL LC +K E
Sbjct: 330 ILDALIGSVSAVDPD---SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYE 386
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
+ S YS+++ LC G+ + + + G PDV Y +I + C+
Sbjct: 387 LLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE 446
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
++ A L+ +M G K ++ T Y
Sbjct: 447 MIRPAKKLWDEMFVEGCKMNLTT------------------------------------Y 470
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+VLI L + E+++RLF+ M+++G+EPD+ Y +I +GL KE
Sbjct: 471 NVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLI-----EGLCKE 515
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++ ++ G F + +Y+++ LCK G+V ++ +E++ + + D+ Y LI+
Sbjct: 381 LIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIE 440
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
C + A +++EM +G K ++ TYNVL + EA ++ FD+M G+EP
Sbjct: 441 ACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
+ T + +IEGLC K+ A F + ++
Sbjct: 501 DETIYMSLIEGLCKETKIEAAMEVFRKCMER 531
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 172/454 (37%), Gaps = 57/454 (12%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK+ K + + LD Y + D L K A + EE ++ L+ G
Sbjct: 105 FKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTS 164
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN-ST 129
G A +F +M++KG + + + V CR+ E + DE++ + N S
Sbjct: 165 DGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSI 224
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYGDDKSP 185
+I+ LC + +A L++ + Y + + N Y
Sbjct: 225 IALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFV---VTGNLYERQVVL 281
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL--------CLVGDIG-- 235
++G +A+ L L + + AKE + + K L+G +
Sbjct: 282 KKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV 341
Query: 236 ---KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
A++ L M S P+ S + LC K+ H ++ +G+ ++ +Y+
Sbjct: 342 DPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYS 401
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
MI+ C+ ++E+ Q+MK+ G+ P
Sbjct: 402 LMISFLCKAGRVRESYTALQEMKKEGLAP------------------------------- 430
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
DV Y+ LI K + A +L+++M +G + + TY +I ++G +E
Sbjct: 431 -----DVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEE 485
Query: 413 ASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+ L D+M +G+ P I ++ + K K++
Sbjct: 486 SLRLFDKMLERGIEPDETIYMSLIEGLCKETKIE 519
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 188/418 (44%), Gaps = 52/418 (12%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D+ T+L+ Y N D +F+EMK + ++VT+ L +G RN + F
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLF 182
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEA-EAHFNRLQ---DKSVEIYSAMVNGYCEA 172
M+++G +PNS T + L G G + H ++ DK++ + ++++N Y +
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 173 SNNNN-----NYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
N + + KS + + GY L +A +F + + ES F +
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLNYVRLSESSFASV 301
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG---KTKHARSLFDS---F 279
KLC L E + + S + Y + D ++ D+ F
Sbjct: 302 IKLC--------ANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
G +VV++T MI+ + + + +EA+DLF +MKR+G++P+ TY+V+L A
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL-------TA 406
Query: 340 LDVINT--IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
L VI+ + + +T + L++ +K E+A ++F + DK D V +
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIVAW 462
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTPSS-------HIISAVNRSILKARKVQFH 448
+ M++ Y + G + A ++ E++ G+ P+ ++ +A N S+ + + QFH
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK--QFH 518
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 176/398 (44%), Gaps = 67/398 (16%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T L+ Y ++DA +F E+ G ++V++ + +G +ND A++ F EM+
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ---DKSVEIYSAMVNGYC-----EAS 173
GV PN T+ +I L ++ + +E H ++ ++S + +A+++ Y E +
Sbjct: 391 KGVRPNEFTYSVI---LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 174 NNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
+ DDK S + GY + E A ++F EL+ KG I E F + +C
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT-KGGIKPNEFTFSSILNVCAA 506
Query: 232 --GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
+G+ + ++ S + S +L G + A +F R D+V
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK----RQREKDLV 562
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
++ +MI+ Y + +ALD+F++MK+R +K D +T+
Sbjct: 563 SWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF----------------------- 599
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI-DKGLEPDKVTYTDMISLYYKKG 408
I + C GL+ E+ + F+ M+ D + P K + M+ LY + G
Sbjct: 600 -----IGVFAACTHA---GLV-----EEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQ 446
+++A ++++ M + P+ S + R+IL A +V
Sbjct: 647 QLEKAMKVIENMPN----PAG---STIWRTILAACRVH 677
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 128/317 (40%), Gaps = 46/317 (14%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLI 65
+ VD F E K G+ + Y+++ AL V E+ ++ N + T L+
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPSEVHAQVVKTNYERSSTVGTALL 435
Query: 66 KGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
Y G + +A +F+ + +K DIV ++ + AG + E AI F E+ G++
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 126 PNSTTHKMIIEGLCSV-------GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
PN T I+ +C+ GK A +RL D S+ + SA++ Y + N
Sbjct: 492 PNEFTFSSILN-VCAATNASMGQGKQFHGFAIKSRL-DSSLCVSSALLTMYAKKGN---- 545
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
+E A E+F K D+ S +++ G KA+
Sbjct: 546 --------------------IESAEEVFKRQREK-DLVSWNS---MISGYAQHGQAMKAL 581
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINS 297
+ + M+ V+ + + V A H G + FD V P + M++
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 298 YCRMNSLKEALDLFQDM 314
Y R L++A+ + ++M
Sbjct: 642 YSRAGQLEKAMKVIENM 658
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 218 EESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
ES LL G +A +L + L +E ++S VL + R L
Sbjct: 58 RESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHC 117
Query: 278 SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNA 337
+ GF DV T+++++Y + ++ K+ +F +MK R +V+T+T L+ G +N+
Sbjct: 118 QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNS 173
Query: 338 AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
+V+ T++ M+ + ++ + L + +++ ++ GL+
Sbjct: 174 MNDEVL-TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 398 TDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
+I+LY K G +++A L D+ K + + +IS
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 127/316 (40%), Gaps = 39/316 (12%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG 88
+ DA KLGKV++A ++ + D DI ++ ++ GY G A MF E+ G
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGID----DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV----GKV 144
KP+ T++ + VC A ++ + ++ + + L ++ G +
Sbjct: 490 IKPNEFTFSSI-LNVCAATNA--SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY- 203
AE F R ++K + +++M++GY + K+ E+ KV + +
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAM------KALDVFKEMKKRKVKMDGVTFI 600
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLV-----------------GDIGKAMKLLETMRS 246
+F ++ G + + E F ++ + C + G + KAMK++E M
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP- 659
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
N S I +I+ A C V K L + D Y + N Y +E
Sbjct: 660 -NPAGSTIWRTIL--AACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 307 ALDLFQDMKRRGIKPD 322
+ + M R +K +
Sbjct: 717 RAKVRKLMNERNVKKE 732
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 201/456 (44%), Gaps = 61/456 (13%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E E + V++N + D + G++D A+E+ +E+ +NI + +++K
Sbjct: 132 FQEMPERNV----VSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQ 183
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+G + +A +F M + D+V++ + G+ +N + A FD M E N +
Sbjct: 184 RGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMP----ERNIIS 235
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG-DDKSPTP-- 187
+I G ++ EA+ F + ++ ++ M+ G+ N G D+ P
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV 295
Query: 188 ISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC--LVGDIGKAMKLL 241
IS GY + E+A +F ++ G + + + C L G + + ++
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIH 354
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + + ++I+ S +L+ G+ AR +FD+ G D++++ +MI Y
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN--GLVCQRDLISWNSMIAVYAHH 412
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE-ISLDVV 360
KEA++++ M++ G KP +TY LL+ +A ++ ++D+ + E + L
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFAC-SHAGLVEKGMEFFKDLVRDESLPLREE 471
Query: 361 CYSVLIN----------------------------GLMKTDNYEDAIRLFEDMIDKGLEP 392
Y+ L++ ++ N + + + ++++ K LE
Sbjct: 472 HYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLET 531
Query: 393 ---DKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
D TY M ++Y G +EA+E+ +M KG+
Sbjct: 532 GSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGL 567
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 172/430 (40%), Gaps = 111/430 (25%)
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
LI C G + +A +F+ + + D+VT+ + G + + R A FD ++S
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREARELFDRVDS-- 105
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK 183
N T ++ G ++ AE F + +++V ++ M++GY ++
Sbjct: 106 -RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGR--------- 155
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
++KA ELF E+ + +I S K L + G I +AM L E
Sbjct: 156 ---------------IDKALELFDEMPER-NIVSWNSMVKALVQR---GRIDEAMNLFER 196
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M +V + ++ ++D L GK AR LFD R +++++ MI Y + N
Sbjct: 197 MPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNR 248
Query: 304 LKEALDLFQDMKRRGI---------------------------KPDVITYTVLLYGSFKN 336
+ EA LFQ M R + +VI++T ++ G +N
Sbjct: 249 IDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVEN 308
Query: 337 AA---ALDVINTIWRDMK-----QTEISLDVVC--------------------------- 361
AL+V + + RD T +S+ C
Sbjct: 309 KENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV 368
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGL--EPDKVTYTDMISLYYKKGLMKEASELLDE 419
S L+N K+ A ++F D GL + D +++ MI++Y G KEA E+ ++
Sbjct: 369 TSALLNMYSKSGELIAARKMF----DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQ 424
Query: 420 MSSKGMTPSS 429
M G PS+
Sbjct: 425 MRKHGFKPSA 434
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 75/344 (21%)
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
ND + N + S P + +I LC VGK+ EA F+ L ++ V ++ +
Sbjct: 24 NDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHV 83
Query: 166 VNGYCEA--------------SNNN--------NNYGDDKSPTPISEV------------ 191
+ GY + S N + Y K + I+E+
Sbjct: 84 ITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLS-IAEMLFQEMPERNVVS 142
Query: 192 ------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
GY + ++KA ELF E+ + +I S K L + G I +AM L E M
Sbjct: 143 WNTMIDGYAQSGRIDKALELFDEMPER-NIVSWNSMVKALVQR---GRIDEAMNLFERMP 198
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+V + ++ ++D L GK AR LFD R +++++ MI Y + N +
Sbjct: 199 RRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRID 250
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD------V 359
EA LFQ M R D ++ ++ G +N R+M + D V
Sbjct: 251 EADQLFQVMPER----DFASWNTMITGFIRN-----------REMNKACGLFDRMPEKNV 295
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMI-DKGLEPDKVTYTDMIS 402
+ ++ +I G ++ E+A+ +F M+ D ++P+ TY ++S
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 148/380 (38%), Gaps = 93/380 (24%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNI--------------------------- 54
D V++ + D L K GKVD+A + + + +NI
Sbjct: 201 DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 55 DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAIN 114
+ D + T+I G+ + A +F+ M K +++++ + G N E A+N
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALN 316
Query: 115 NFDEMESDG-VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE-----IYSAMVNG 168
F +M DG V+PN T+ I+ + + E + ++L KSV + SA++N
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQ-QIHQLISKSVHQKNEIVTSALLNM 375
Query: 169 YCEA---------------------SNNN-----NNYGDDKSPTPI-----------SEV 191
Y ++ S N+ ++G K + S V
Sbjct: 376 YSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAV 435
Query: 192 GYCKV-------DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
Y + LVEK E F +L + E + L LC G+A +L +
Sbjct: 436 TYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC-----GRAGRLKDVT 490
Query: 245 RSLNVEPSQI---MYSIVLDALCHV-GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+N + +++ Y +L A C+V + A+ + + G + D TY M N Y
Sbjct: 491 NFINCDDARLSRSFYGAILSA-CNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAA 548
Query: 301 MNSLKEALDLFQDMKRRGIK 320
+EA ++ MK +G+K
Sbjct: 549 NGKREEAAEMRMKMKEKGLK 568
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 184/423 (43%), Gaps = 30/423 (7%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E + G+F D Y + A + M + + DI LI Y
Sbjct: 105 FSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSR 164
Query: 71 QGNL--IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-ESDGVEPN 127
G L DA +F +M + D V++N + G+ + E R A FDEM + D + N
Sbjct: 165 CGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWN 220
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN-NNYGDDKSPT 186
+ +++G ++ +A F ++ +++ +S MV GY +A + DK P
Sbjct: 221 T-----MLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 187 PISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
P V GY + L+++A L ++ G + +L G + M
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
++ ++ N+ + + + +LD G K A +F+ + D+V++ TM++
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGL 391
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV-INTIWRDMKQTEISL 357
KEA++LF M+R GI+PD +T+ +L S +A +D I+ + K ++
Sbjct: 392 GVHGHGKEAIELFSRMRREGIRPDKVTFIAVLC-SCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
V Y L++ L + ++AI++ + M +EP+ V + ++ + A E+L
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALLGACRMHNEVDIAKEVL 507
Query: 418 DEM 420
D +
Sbjct: 508 DNL 510
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 162/396 (40%), Gaps = 36/396 (9%)
Query: 32 ALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKP 91
+LC+ + + A+ + +++ N+ L +LI+ + AF++F+EM+ G
Sbjct: 62 SLCR--QTNLAVRVFNQVQEPNVHL----CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFA 115
Query: 92 DIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAH- 150
D TY L V + +E G+ + +I+ G +G +A
Sbjct: 116 DNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMK 175
Query: 151 -FNRLQDKSVEIYSAMVNGYCEAS--NNNNNYGDDKSPTPISEV-----GYCKVDLVEKA 202
F ++ ++ +++M+ G +A + D+ + GY + + KA
Sbjct: 176 LFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKA 235
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM--RSLNVEPSQIMYSIVL 260
+ELF ++ + + S ++ GD+ A + + M + NV + ++I++
Sbjct: 236 FELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFDKMPLPAKNV----VTWTIII 287
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
G K A L D V G D +++ + L + + +KR +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 321 PDVITYTVLL--YGSFKN-AAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
+ LL Y N A DV N I + D+V ++ +++GL + ++
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK--------DLVSWNTMLHGLGVHGHGKE 399
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
AI LF M +G+ PDKVT+ ++ GL+ E
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
AMKL E M E + ++ +L L G+ + AR LFD R D++++ TM++
Sbjct: 173 AMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLD 224
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
Y R + +A +LF+ M R + ++++ ++ G + A +++ ++ M +
Sbjct: 225 GYARCREMSKAFELFEKMPER----NTVSWSTMVMG-YSKAGDMEMARVMFDKMPLP--A 277
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+VV ++++I G + ++A RL + M+ GL+ D +++ + GL+ +
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 417 LDEMSSKGMTPSSHIISAV 435
+ + ++++++A+
Sbjct: 338 HSILKRSNLGSNAYVLNAL 356
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 204/479 (42%), Gaps = 101/479 (21%)
Query: 23 GVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFN 82
GV + L ++GK+++A + + L+ K I + +++ GY G +A +F+
Sbjct: 17 GVNCSFEISRLSRIGKINEARKFFDSLQFKAIG----SWNSIVSGYFSNGLPKEARQLFD 72
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
EM + ++V++N L +G +N A N F+ M E N + +++G G
Sbjct: 73 EMSER----NVVSWNGLVSGYIKNRMIVEARNVFELMP----ERNVVSWTAMVKGYMQEG 124
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPT-----PISEV------ 191
VGEAE+ F R+ +++ ++ M G + DK+ P+ +V
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDDGR------IDKARKLYDMMPVKDVVASTNM 178
Query: 192 --GYCKVDLVEKAYELFLEL-----------------SNKGDIAK----------EESCF 222
G C+ V++A +F E+ +N+ D+A+ E S
Sbjct: 179 IGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWT 238
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
+L L G I A + E M V I + ++ VG+ AR +FD R
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIVGFGEVGEISKARRVFDLMEDR 294
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV----------ITYTVLLYG 332
D T+ MI +Y R EALDLF M+++G++P T L YG
Sbjct: 295 ----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 333 SFKNAAAL-----------DVINTIWRDMKQTEI-----------SLDVVCYSVLINGLM 370
+A + V+ T++ +K E+ S D++ ++ +I+G
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMY--VKCGELVKAKLVFDRFSSKDIIMWNSIISGYA 408
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTPS 428
E+A+++F +M G P+KVT +++ G ++E E+ + M SK +TP+
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPT 467
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 61/354 (17%)
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE--ASNNNNNYGDDKSPTPISEV- 191
I L +GK+ EA F+ LQ K++ ++++V+GY D+ S +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 192 ----GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
GY K ++ +A +F EL + ++ S ++ G +G+A L M
Sbjct: 84 GLVSGYIKNRMIVEARNVF-ELMPERNVV---SWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
N ++ ++++ L G+ AR L+D DVV T MI CR + EA
Sbjct: 140 N----EVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEA 191
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM-KQTEISL--------- 357
+F +M+ R +V+T+T ++ G ++ +DV ++ M ++TE+S
Sbjct: 192 RLIFDEMRER----NVVTWTTMITG-YRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTL 246
Query: 358 -----------------DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
V+ + +I G + A R+F+ M D+ D T+ M
Sbjct: 247 SGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGM 302
Query: 401 ISLYYKKGLMKEASELLDEMSSKGMTPS-SHIIS-----AVNRSILKARKVQFH 448
I Y +KG EA +L +M +G+ PS +IS A S+ R+V H
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAH 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+C +++L +G I +A K ++++ + ++ ++ G K AR LFD
Sbjct: 19 NCSFEISRLSRIGKINEARKFFDSLQFKAIGS----WNSIVSGYFSNGLPKEARQLFDEM 74
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
R +VV++ +++ Y + + EA ++F+ M R +V+++T ++ G +
Sbjct: 75 SER----NVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKGYMQEGMV 126
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ + WR ++ E+S ++V+ GL+ + A +L++ M K D V T+
Sbjct: 127 GEAESLFWRMPERNEVS-----WTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTN 177
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV--NRSILKARKV 445
MI ++G + EA + DEM + + + +I+ N + ARK+
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKL 225
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 169/391 (43%), Gaps = 45/391 (11%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
++F +S D V++N + + GK+D+A ++ +E V+ D+ +T ++ GY
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQN 294
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
+ +A +F++M + + V++N + AG + + +A FD M N +T
Sbjct: 295 RMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTW 346
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+I G GK+ EA+ F+++ + ++AM+ GY ++ ++
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF--------------- 391
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
+A LF+++ +G S L+ V + +L + E
Sbjct: 392 ---------EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYET 442
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ + +L C G + A LF G+ D+V++ TMI Y R + AL F
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT-EISLDVVCYSVLINGLM 370
+ MKR G+KPD T +L + + +D + M Q + + Y+ +++ L
Sbjct: 499 ESMKREGLKPDDATMVAVL-SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLG 557
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
+ EDA L ++M EPD + ++
Sbjct: 558 RAGLLEDAHNLMKNM---PFEPDAAIWGTLL 585
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 166/378 (43%), Gaps = 42/378 (11%)
Query: 55 DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAIN 114
D DIK + I Y G +A +F M + V+YN + +G RN E +A
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARK 116
Query: 115 NFDEM-ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
FDEM E D V N ++I+G +G+A F + ++ V ++ M++GY +
Sbjct: 117 LFDEMPERDLVSWN-----VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQ-- 169
Query: 174 NNNNNYGDDKSPT--PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
N DD + E + + AY ++ + K + L++ CL+
Sbjct: 170 ---NGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 232 GDIGKAMKLLETMR---SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP-- 286
G K K++E + S+NV + ++ ++ GK AR LFD +P
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGKIDEARQLFDE------SPVQ 279
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
DV T+T M++ Y + ++EA +LF M R + +++ +L G + +++ +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAG-YVQGERMEMAKEL 334
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ M +S ++ +I G + +A LF+ M + D V++ MI+ Y +
Sbjct: 335 FDVMPCRNVS----TWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQ 386
Query: 407 KGLMKEASELLDEMSSKG 424
G EA L +M +G
Sbjct: 387 SGHSFEALRLFVQMEREG 404
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 190/457 (41%), Gaps = 82/457 (17%)
Query: 22 DGVAYNIVFDALCK---LGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAF 78
D V++N++ + LGK + E+ E D+ + T++ GY G + DA
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPER-------DVCSWNTMLSGYAQNGCVDDAR 177
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+F+ M K + V++N L + +N + A F E+ + + ++ G
Sbjct: 178 SVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGF 229
Query: 139 CSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS--NNNNNYGDDKSPTPISEV----- 191
K+ EA F+ + + V ++ ++ GY ++ + D+ +P+ +V
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE---SPVQDVFTWTA 286
Query: 192 ---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
GY + +VE+A ELF ++ + ++ S +L + A +L + M N
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEV----SWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
V ++ ++ GK A++LFD R D V++ MI Y + EAL
Sbjct: 343 VST----WNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEAL 394
Query: 309 DLFQDMKRRGIK-------------PDVIT-------YTVLLYGSFKNA----------- 337
LF M+R G + DV+ + L+ G ++
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454
Query: 338 ---AALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDK 394
+++ N ++++M D+V ++ +I G + E A+R FE M +GL+PD
Sbjct: 455 CKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 395 VTYTDMISLYYKKGLMKEASELLDEMSSK-GMTPSSH 430
T ++S GL+ + + M+ G+ P+S
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQ 547
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 242 ETMRSLNVEP--SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
E +R P S + Y+ ++ G+ + AR LFD R D+V++ MI Y
Sbjct: 82 EALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYV 137
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD- 358
R +L +A +LF+ M R DV ++ +L G +N D + R ++ ++S +
Sbjct: 138 RNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 359 -------------------------VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPD 393
+V ++ L+ G +K +A + F+ M + D
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----D 249
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV--NRSILKARKV 445
V++ +I+ Y + G + EA +L DE + + + ++S NR + +AR++
Sbjct: 250 VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 172/409 (42%), Gaps = 53/409 (12%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A +FD + L D E RE KN+ + ++IK Y G+++ A +F++M
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERF-CKNV----VSWNSMIKAYLKVGDVVSARLLFDQM 307
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK--MIIEGLCSVG 142
K++ D +++N + G A F EM PN H M++ G SVG
Sbjct: 308 KDR----DTISWNTMIDGYVHVSRMEDAFALFSEM------PNRDAHSWNMMVSGYASVG 357
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
V A +F + +K +++++ Y N +Y ++A
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAY----EKNKDY--------------------KEA 393
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
+LF+ ++ +G+ + LL+ + ++ M++ + + V P +++ ++
Sbjct: 394 VDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK-TVIPDVPVHNALITM 452
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
G+ +R +FD +V+T+ MI Y + EAL+LF MK GI P
Sbjct: 453 YSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPS 509
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQT-EISLDVVCYSVLINGLMKTDNYEDAIRL 381
IT+ +L + +A +D + M +I + YS L+N +E+A+ +
Sbjct: 510 HITFVSVL-NACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYI 568
Query: 382 FEDMIDKGLEPDKVTY---TDMISLYYKKGLMKEASELLDEMSSKGMTP 427
M EPDK + D +Y GL A+E + + + TP
Sbjct: 569 ITSM---PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP 614
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 199/503 (39%), Gaps = 117/503 (23%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A N + + + G + +A ++ E+L +N + T+I GY + + A +F+ M
Sbjct: 42 ATNKELNQMIRSGYIAEARDIFEKLEARNT----VTWNTMISGYVKRREMNQARKLFDVM 97
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARV---AINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
K D+VT+N + +G R A FDEM S +S + +I G
Sbjct: 98 P----KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKN 149
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY-------GDDKSP--------- 185
++GEA F ++ +++ +SAM+ G+C+ ++ D SP
Sbjct: 150 RRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLI 209
Query: 186 --TPISEVGYC----------KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC---- 229
+SE + + DLV L + +G + F + LC
Sbjct: 210 KNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDH 269
Query: 230 -----------------------LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
VGD+ A L + M+ + I ++ ++D HV
Sbjct: 270 GGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT----ISWNTMIDGYVHV 325
Query: 267 GKTKHARSLFDSFVGR----------GF---------------TPD--VVTYTTMINSYC 299
+ + A +LF R G+ TP+ V++ ++I +Y
Sbjct: 326 SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN-TIWRDMKQTEISL- 357
+ KEA+DLF M G KPD T T LL +A+ ++N + M Q +
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL------SASTGLVNLRLGMQMHQIVVKTV 439
Query: 358 --DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
DV ++ LI + ++ R+F++M L+ + +T+ MI Y G EA
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGGYAFHGNASEALN 496
Query: 416 LLDEMSSKGMTPSSHI--ISAVN 436
L M S G+ P SHI +S +N
Sbjct: 497 LFGSMKSNGIYP-SHITFVSVLN 518
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 116/228 (50%), Gaps = 3/228 (1%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLL-TKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
L KA+E++ E K D + S ++L+ L G + A KL + M+ + PS ++
Sbjct: 293 LPYKAFEIY-ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVF 351
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
S ++D++ G+ + ++ G G P + ++I+SY + L AL L+ +MK+
Sbjct: 352 SSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK 411
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
G +P+ YT+++ S + L+V T+++DM++ YS L+ + +
Sbjct: 412 SGFRPNFGLYTMII-ESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVD 470
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
A++++ M + GL P +Y +++L K L+ A ++L EM + G
Sbjct: 471 SAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
KA ++ E+M + Y +++ +L G+ A LF R P +++++
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+S + L ++ ++ +M+ G +P + L+ S+ A LD +W +MK++
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI-DSYAKAGKLDTALRLWDEMKKSGF 414
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASE 415
+ Y+++I K+ E A+ +F+DM G P TY+ ++ ++ G + A +
Sbjct: 415 RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMK 474
Query: 416 LLDEMSSKGMTP--SSHI 431
+ + M++ G+ P SS+I
Sbjct: 475 IYNSMTNAGLRPGLSSYI 492
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 144/392 (36%), Gaps = 57/392 (14%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
FK+ +ESG +D YN + G A E+ E + + LD Y +I
Sbjct: 266 FKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAK 325
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G L AF +F +MK + +P ++ L + + ++ + EM+ G P++T
Sbjct: 326 SGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATM 385
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
+I+ GK+ D ++ ++ M + S N+G
Sbjct: 386 FVSLIDSYAKAGKL-----------DTALRLWDEM-----KKSGFRPNFG---------- 419
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE 250
Y + +E K G + AM + + M
Sbjct: 420 -----------LYTMIIESHAKS------------------GKLEVAMTVFKDMEKAGFL 450
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P+ YS +L+ G+ A +++S G P + +Y +++ + A +
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKI 510
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
+MK G DV VL+ + A++D+ R M + I + L M
Sbjct: 511 LLEMKAMGYSVDVCASDVLMI--YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCM 568
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
K Y+ A L E ++ + D V YT +++
Sbjct: 569 KNGLYDSARPLLETLVHSAGKVDLVLYTSILA 600
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 133/319 (41%), Gaps = 26/319 (8%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + ++ +++ LDG Y ++ +L K G++D A ++ ++++ + + +
Sbjct: 292 GLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVF 351
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
++L+ G L + ++ EM+ G +P + L + + A+ +DEM+
Sbjct: 352 SSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKK 411
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS-----------VEIY--SAMVNG 168
G PN + MIIE GK+ A F ++ +E++ S V+
Sbjct: 412 SGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDS 471
Query: 169 YCEASNNNNNYGDDKSPTPISEVGYCKV----DLVEKAYELFLELSNKG---DIAKEESC 221
+ N+ N G P S + + LV+ A ++ LE+ G D+ +
Sbjct: 472 AMKIYNSMTNAG--LRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASD-- 527
Query: 222 FKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG 281
+L + A+K L M S ++ + + + ++ G AR L ++ V
Sbjct: 528 --VLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVH 585
Query: 282 RGFTPDVVTYTTMINSYCR 300
D+V YT+++ R
Sbjct: 586 SAGKVDLVLYTSILAHLVR 604
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
D TY +I S + L A LFQ MK R ++P ++ L+ S A LD +
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV-DSMGKAGRLDTSMKV 370
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ +M+ + LI+ K + A+RL+++M G P+ YT +I + K
Sbjct: 371 YMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAK 430
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAV 435
G ++ A + +M G P+ S +
Sbjct: 431 SGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 4/198 (2%)
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT---YTTMINSYCRMNSLKEA 307
PS Y ++ D L +SLF+ V + ++ Y +I + L+ A
Sbjct: 203 PSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVA 262
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
F+ + G K D TY L+ F N I+ M++T+ LD Y ++I
Sbjct: 263 FCCFKKAQESGCKIDTQTYNNLMM-LFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIP 321
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
L K+ + A +LF+ M ++ L P ++ ++ K G + + ++ EM G P
Sbjct: 322 SLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRP 381
Query: 428 SSHIISAVNRSILKARKV 445
S+ + ++ S KA K+
Sbjct: 382 SATMFVSLIDSYAKAGKL 399
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIKHYTTLIKG 67
D KE E D YN + LCK + E +E+R ++ D+ +T LI
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
C NL +A Y+ +++ N GFKPD YN + G C + A+ + +M+ +GVEP+
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCE 171
T+ +I GL G+V EA + + D E Y++++NG C
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 37/234 (15%)
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
NN D+ T I+ C+ V++A +L EL+ K + LL LC D+
Sbjct: 152 NNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLH 211
Query: 236 KAMKLLETMRS-LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+ ++ MR +V+P + ++I++D +C+ + A L GF PD Y T+
Sbjct: 212 VVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTI 271
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
+ +C ++ EA+ +++ MK G++PD ITY L++
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF----------------------- 308
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
GL K E+A + M+D G EPD TYT +++ +KG
Sbjct: 309 -------------GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 123/299 (41%), Gaps = 45/299 (15%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL--RVKNIDLDIKHYTTLIKGYCLQ--G 72
S + LD +N V + + V+D +++ + + N + L+ C
Sbjct: 79 SRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDS 138
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEMESDGVEPNST 129
++ + + N M N G +PD VT ++ +C R DEA+ + E S P++
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS---PPDTY 195
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQD-----KSVEIYSAMVNGYCEASNNNNNYGDDKS 184
T+ +++ LC + + ++D + ++ +++ C + N
Sbjct: 196 TYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKN---------- 245
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF---KLLTKLCLVGDIGKAMKLL 241
+ +A L +L N G + CF ++ C + +A+ +
Sbjct: 246 --------------LREAMYLVSKLGNAG---FKPDCFLYNTIMKGFCTLSKGSEAVGVY 288
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
+ M+ VEP QI Y+ ++ L G+ + AR + V G+ PD TYT+++N CR
Sbjct: 289 KKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V++ I+ D +C + +A+ + +L D Y T++KG+C +A ++
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY 288
Query: 82 NEMKNKGFKPDIVTYNVLAAGVC---RNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+MK +G +PD +TYN L G+ R +EAR+ + M G EP++ T+ ++ G+
Sbjct: 289 KKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT---MVDAGYEPDTATYTSLMNGM 345
Query: 139 CSVG 142
C G
Sbjct: 346 CRKG 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 248 NVEPSQIMYSIVLDALCHVGKTK--HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
N P + + I+L C + + + + V G PD VT + S C +
Sbjct: 117 NFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVD 176
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT-EISLDVVCYSV 364
EA DL +++ + PD TY LL K L V+ +M+ ++ D+V +++
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCK-CKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 365 LINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
LI+ + + N +A+ L + + G +PD Y ++ + EA + +M +G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 425 MTPSSHIISAVNRSILKARKVQ 446
+ P + + + KA +V+
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVE 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 100/252 (39%), Gaps = 56/252 (22%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
+G+ D V +I +LC+ G+VD+A ++ +EL K+ D Y L+K C +L
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 77 AFYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
+ +EM++ KPD+V++ +L VC + R A+ ++ + G +P+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCF------ 266
Query: 136 EGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
+Y+ ++ G+C S + G
Sbjct: 267 -------------------------LYNTIMKGFCTLSKGSEAVG--------------- 286
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
++ ++ +G + + L+ L G + +A L+TM EP
Sbjct: 287 ---------VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTAT 337
Query: 256 YSIVLDALCHVG 267
Y+ +++ +C G
Sbjct: 338 YTSLMNGMCRKG 349
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 169/377 (44%), Gaps = 45/377 (11%)
Query: 59 KHYTTLIK--GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
K YT L K G C Q + A +F M ++G KP I Y L + +++ A +
Sbjct: 145 KTYTKLFKVLGNCKQPD--QASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTL 202
Query: 117 DEMES-DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNN 175
+ M+S +P+ T ++I C +G+ F+ + KS+ + + + C
Sbjct: 203 EYMKSVSDCKPDVFTFTVLISCCCKLGR-------FDLV--KSIVLEMSYLGVGCSTVTY 253
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI- 234
N T I GY K + E+ + ++ GD L +C + I
Sbjct: 254 N---------TIID--GYGKAGMFEEMESVLADMIEDGDS---------LPDVCTLNSII 293
Query: 235 -----GKAMKLLETMRS----LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
G+ M+ +E+ S + V+P ++I++ + G K S+ D R F+
Sbjct: 294 GSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFS 353
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
VTY +I ++ + +++ D+F+ MK +G+KP+ ITY L+ ++ A + I++
Sbjct: 354 LTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLV-NAYSKAGLVVKIDS 412
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
+ R + +++ LD ++ +IN + + L+ M ++ +PDK+T+ MI Y
Sbjct: 413 VLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYT 472
Query: 406 KKGLMKEASELLDEMSS 422
G+ EL +M S
Sbjct: 473 AHGIFDAVQELEKQMIS 489
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 237 AMKLLETMRSLN-VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A+K+ +R + EP Y+ + L + + A LF+ + G P + YT++I
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 296 NSYCRMNSLKEALDLFQDMKR-RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
+ Y + L +A + MK KPDV T+TVL+ K D++ +I +M
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCK-LGRFDLVKSIVLEMSYLG 245
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE-PDKVTYTDMISLYYKKGLMKEA 413
+ V Y+ +I+G K +E+ + DMI+ G PD T +I Y M++
Sbjct: 246 VGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM 305
Query: 414 SELLDEMSSKGMTP 427
G+ P
Sbjct: 306 ESWYSRFQLMGVQP 319
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 236 KAMKLLETMRSL-NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
KA LE M+S+ + +P +++++ C +G+ +S+ G VTY T+
Sbjct: 197 KAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTI 256
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIK-PDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
I+ Y + +E + DM G PDV T ++ GS+ N + + + + +
Sbjct: 257 IDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSII-GSYGNGRNMRKMESWYSRFQLM 315
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ D+ +++LI K Y+ + + M + VTY +I + K G +++
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKM 375
Query: 414 SELLDEMSSKGMTPSS 429
++ +M +G+ P+S
Sbjct: 376 DDVFRKMKYQGVKPNS 391
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 144/350 (41%), Gaps = 59/350 (16%)
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+F+EM +G KPD T+ + + +N + A+ F++M S G EP++ T
Sbjct: 197 LFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVT--------- 247
Query: 140 SVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
+AM++ Y A N VD+
Sbjct: 248 ----------------------MAAMIDAYGRAGN---------------------VDMA 264
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDIGKAMKLLETMRSLNVEPSQIMYSI 258
Y+ + D F L ++ V G+ + + E M++L V+P+ ++Y+
Sbjct: 265 LSLYDRARTEKWRIDAVT----FSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++D++ + A+ ++ + GFTP+ TY ++ +Y R +AL ++++MK +G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS-LDVVCYSVLINGLMKTDNYED 377
+ VI Y LL N +D I++DMK E D +S LI + +
Sbjct: 381 LSLTVILYNTLLSMCADN-RYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE 439
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
A M + G EP T +I Y K + + D++ G+TP
Sbjct: 440 AEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 10/207 (4%)
Query: 240 LLETMRSLNVEPSQ--IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
LLETM+ PS+ I+Y++ + + + LFD + RG PD T+TT+I S
Sbjct: 165 LLETMK-----PSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII-S 218
Query: 298 YCRMNSL-KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
R N + K A++ F+ M G +PD +T ++ ++ A +D+ +++ + +
Sbjct: 219 CARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMI-DAYGRAGNVDMALSLYDRARTEKWR 277
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASEL 416
+D V +S LI + NY+ + ++E+M G++P+ V Y +I + +A +
Sbjct: 278 IDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKII 337
Query: 417 LDEMSSKGMTPSSHIISAVNRSILKAR 443
++ + G TP+ +A+ R+ +AR
Sbjct: 338 YKDLITNGFTPNWSTYAALVRAYGRAR 364
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 117/287 (40%), Gaps = 21/287 (7%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ V+ F++ G D V + DA + G VD A+ + + R + +D +
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+TLI+ Y + GN ++ EMK G KP++V YN L + R A + ++ +
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+G PN +T+ ++ +A A + +++K + + + N +N
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNR---- 399
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVGDIGKAMKL 240
V++A+E+F ++ N + F L+T G + +A
Sbjct: 400 ----------------YVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAA 443
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
L MR EP+ + + V+ + FD + G TPD
Sbjct: 444 LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 129/320 (40%), Gaps = 35/320 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F E E G+ D + + + G A+E E++ + D +I Y
Sbjct: 198 FDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR 257
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAA--GVCRNDEARVAINNFDEMESDGVEPNS 128
GN+ A +++ + + ++ D VT++ L GV N + +N ++EM++ GV+PN
Sbjct: 258 AGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG--CLNIYEEMKALGVKPNL 315
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQ----DKSVEIYSAMVNGYCEASNNNNNYGDDKS 184
+ +I+ + + +A+ + L + Y+A+V Y A YGDD
Sbjct: 316 VIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRA-----RYGDD-- 368
Query: 185 PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD-IGKAMKLLET 243
A ++ E+ KG ++ + L +C + +A ++ +
Sbjct: 369 -----------------ALAIYREMKEKG-LSLTVILYNTLLSMCADNRYVDEAFEIFQD 410
Query: 244 MRSLNV-EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
M++ +P +S ++ G+ A + GF P + T++I Y +
Sbjct: 411 MKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAK 470
Query: 303 SLKEALDLFQDMKRRGIKPD 322
+ + + F + GI PD
Sbjct: 471 QVDDVVRTFDQVLELGITPD 490
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
V+N + MK S +V+ Y+V + K+ + E + +LF++M+++G++PD T+T +I
Sbjct: 161 VLNNLLETMKP---SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII 217
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
S + G+ K A E ++MSS G P + ++A+
Sbjct: 218 SCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAM 251
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
+V+ Y + + + L+++ LF +M RGIKPD T+T ++ + +N +
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE-- 231
Query: 347 W-RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
W M D V + +I+ + N + A+ L++ + D VT++ +I +Y
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 406 KKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
G + +EM + G+ P+ I + + S+ +A++
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKR 330
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF--TPDVV 289
G + +A+ M+ + +P Y+ +++ALC VG K AR L D GF PD
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 290 TYTTMINSYCR-----------MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN-- 336
TYT +I+SYCR + EA +F++M RG PDV+TY L+ G K
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 337 -AAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE-PDK 394
AL+ ++ DMK + V Y+ I T+ E AI + M G P
Sbjct: 299 IGRALE----LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS 354
Query: 395 VTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
TYT +I + EA +L+ EM G+ P + V
Sbjct: 355 STYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 21/219 (9%)
Query: 224 LLTKLCLVGDIGKAMKLLETMR--SLNVEPSQIMYSIVLDALCHVG-----------KTK 270
++ LC VG+ KA LL+ M+ P Y+I++ + C G +
Sbjct: 206 IINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMW 265
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY-TVL 329
A +F + RGF PDVVTY +I+ C+ N + AL+LF+DMK +G P+ +TY + +
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 330 LYGSFKN--AAALDVINTIWRDMKQTEISLD-VVCYSVLINGLMKTDNYEDAIRLFEDMI 386
Y S N A++++ T MK+ + Y+ LI+ L++T +A L +M+
Sbjct: 326 RYYSVTNEIEGAIEMMRT----MKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
+ GL P + TY + +GL E L + +G+
Sbjct: 382 EAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 15/174 (8%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK--PDVITYTVLL-----YGSFKNAA 338
PDV Y T+IN+ CR+ + K+A L M+ G + PD TYT+L+ YG +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG-MQTGC 256
Query: 339 ALDVINTIW------RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEP 392
+ +W R+M DVV Y+ LI+G KT+ A+ LFEDM KG P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 393 DKVTYTDMISLYYKKGLMKEASELLDEMSSKGM-TPSSHIISAVNRSILKARKV 445
++VTY I Y ++ A E++ M G P S + + ++++ R+
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDL--DIK 59
G + + F KE D AYN + +ALC++G A + +++++ D
Sbjct: 179 GFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTY 238
Query: 60 HYTTLIKGYCLQG-----------NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDE 108
YT LI YC G + +A MF EM +GF PD+VTYN L G C+ +
Sbjct: 239 TYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 109 ARVAINNFDEMESDGVEPNSTTHKMIIE 136
A+ F++M++ G PN T+ I
Sbjct: 299 IGRALELFEDMKTKGCVPNQVTYNSFIR 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 20/271 (7%)
Query: 31 DALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL------QGNLIDAFYMFNEM 84
D C L K +D + + LR + + K+ T CL +G + +A F M
Sbjct: 132 DMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRM 191
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE--PNSTTHKMIIEGLCSVG 142
K KPD+ YN + +CR + A D+M+ G P++ T+ ++I C G
Sbjct: 192 KEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG 251
Query: 143 -KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
+ G +A R+ + + + G+ N D G CK + + +
Sbjct: 252 MQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLID----------GCCKTNRIGR 301
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL-NVEPSQIMYSIVL 260
A ELF ++ KG + + + + + +I A++++ TM+ L + P Y+ ++
Sbjct: 302 ALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLI 361
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
AL + AR L V G P TY
Sbjct: 362 HALVETRRAAEARDLVVEMVEAGLVPREYTY 392
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E G D V YN + D CK ++ A+E+ E+++ K + Y + I+ Y +
Sbjct: 271 FREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSV 330
Query: 71 QGNLIDAFYMFNEMKNKGFK-PDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
+ A M MK G P TY L + A A + EM G+ P
Sbjct: 331 TNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREY 390
Query: 130 THKMIIEGLCSVG 142
T+K++ + L S G
Sbjct: 391 TYKLVCDALSSEG 403
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 180/429 (41%), Gaps = 48/429 (11%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG 88
V + G+++DAI + + L N + TL++ + L A ++F + G
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY-CYG 145
Query: 89 FKPD--IVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
++ + I N+L +C+ + + +A F EM G P+ +++++++G C GK+ E
Sbjct: 146 WEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEE 205
Query: 147 AE----AHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
A + F R+ K + +Y +++ C+A
Sbjct: 206 ATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE------------------------ 241
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE-------P 251
V+ A E+ ++ KG + + C+ + G + + +E ++ L E P
Sbjct: 242 VDDAIEILGKILRKG-LKAPKRCYHHIE----AGHWESSSEGIERVKRLLTETLIRGAIP 296
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
YS + L GK + + +GF P Y + + CR LKEA+ +
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 312 -QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
++M + P V Y VL+ G + +++ + + + KQ + Y L++GL
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ + +A ++ E+M+ K P TY MI EA L+EM S+ M P S
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESS 476
Query: 431 IISAVNRSI 439
+ A+ S+
Sbjct: 477 VWKALAESV 485
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 32/297 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G D V Y I+ DALC G+VDDAIE+ ++ K + + Y + G+
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 71 QGN--LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
+ + + E +G P + +Y+ +A + + M S G EP
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNR--LQDK---SVEIYSAMVNGYCEASNNNNNYGDDK 183
+ ++ LC GK+ EA + N+ +Q +V +Y+ ++ G C+ D K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD---------DGK 384
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNK-GDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
S + VGY K ++S + +A EE+ L+ LC G +A +++E
Sbjct: 385 S---MEAVGYLK------------KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
M + P Y +++ LC + + A + V + P+ + + S C
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 180/429 (41%), Gaps = 48/429 (11%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG 88
V + G+++DAI + + L N + TL++ + L A ++F + G
Sbjct: 87 VIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKY-CYG 145
Query: 89 FKPD--IVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
++ + I N+L +C+ + + +A F EM G P+ +++++++G C GK+ E
Sbjct: 146 WEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEE 205
Query: 147 AE----AHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
A + F R+ K + +Y +++ C+A
Sbjct: 206 ATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGE------------------------ 241
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVE-------P 251
V+ A E+ ++ KG + + C+ + G + + +E ++ L E P
Sbjct: 242 VDDAIEILGKILRKG-LKAPKRCYHHIE----AGHWESSSEGIERVKRLLTETLIRGAIP 296
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
YS + L GK + + +GF P Y + + CR LKEA+ +
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVI 356
Query: 312 -QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
++M + P V Y VL+ G + +++ + + + KQ + Y L++GL
Sbjct: 357 NKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLC 416
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ + +A ++ E+M+ K P TY MI EA L+EM S+ M P S
Sbjct: 417 RDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESS 476
Query: 431 IISAVNRSI 439
+ A+ S+
Sbjct: 477 VWKALAESV 485
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 32/297 (10%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F + G D V Y I+ DALC G+VDDAIE+ ++ K + + Y + G+
Sbjct: 214 FWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWE 273
Query: 71 QGN--LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
+ + + E +G P + +Y+ +A + + M S G EP
Sbjct: 274 SSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTP 333
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNR--LQDK---SVEIYSAMVNGYCEASNNNNNYGDDK 183
+ ++ LC GK+ EA + N+ +Q +V +Y+ ++ G C+ D K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCD---------DGK 384
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNK-GDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
S + VGY K ++S + +A EE+ L+ LC G +A +++E
Sbjct: 385 S---MEAVGYLK------------KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
M + P Y +++ LC + + A + V + P+ + + S C
Sbjct: 430 EMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS 303
M ++ P+ I Y+ ++D C + A+ + DS +G +PDVVT++T+IN YC+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 304 LKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+ +++F +M RRGI + +TYT L++G F LD + +M ++ D + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHG-FCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 364 VLINGLMKTDNYEDAIRLFEDM 385
++ GL A + ED+
Sbjct: 120 CMLAGLCSKKELRKAFAILEDL 141
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 19 MFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAF 78
+F + YN + D CK +VDDA M + + K D+ ++TLI GYC + +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGL 138
+F EM +G + VTY L G C+ + A + +EM S GV P+ T ++ GL
Sbjct: 66 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 125
Query: 139 CSVGKVGEAEAHFNRLQ 155
CS ++ +A A LQ
Sbjct: 126 CSKKELRKAFAILEDLQ 142
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
P +TY +MI+ +C+ + + +A + M +G PDV+T++ L+ G K A +D
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK-AKRVDNGME 66
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
I+ +M + I + V Y+ LI+G + + + A L +MI G+ PD +T+ M++
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 406 KKGLMKEASELLDEMS 421
K +++A +L+++
Sbjct: 127 SKKELRKAFAILEDLQ 142
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
++ C + A ++L++M S P + +S +++ C + + +F RG
Sbjct: 16 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 75
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
+ VTYTT+I+ +C++ L A DL +M G+ PD IT+ +L G
Sbjct: 76 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 28/156 (17%)
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS----VEIYSAMVNGYCEASNNNNNYGD 181
P + T+ +I+G C +V +A+ + + K V +S ++NGYC+A
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR------- 60
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
V+ E+F E+ +G +A + L+ C VGD+ A LL
Sbjct: 61 -----------------VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD 277
M S V P I + +L LC + + A ++ +
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 139
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 144/362 (39%), Gaps = 44/362 (12%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++ F+E + G+ ++N + LC+ V A + + NI D Y +I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMIS 263
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEP 126
G+ G + + + EM GF PD ++Y+ L G+ R ++ FD ++ G P
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 127 NSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNNNNNYGDD 182
++ + +I S E+ ++ R+ D+ ++E YS +V+G +
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK-------- 375
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLE 242
V A E+F E+ ++G + L LC G AM + +
Sbjct: 376 ----------------VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
R S+ Y ++L L GK +++D G+ DV Y +++ C +
Sbjct: 420 KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIG 479
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVL---------------LYGSFKNAAALDVINTIW 347
L+ A+ + ++ R+G P+ Y+ L L+ K A A + + W
Sbjct: 480 HLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFW 539
Query: 348 RD 349
R
Sbjct: 540 RS 541
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP-DVVTYT 292
+ +A++L E S V+ S ++ +L LC A+S+F++ +G P D +Y
Sbjct: 202 VRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYN 259
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
MI+ + ++ ++E + ++M G PD ++Y+ L+ G + D + I+ ++K
Sbjct: 260 IMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVE-IFDNIKH 318
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
D Y+ +I + ++++++R + M+D+ EP+ TY+ ++S K + +
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 413 ASELLDEMSSKGMTPSSHIISA 434
A E+ +EM S+G+ P++ ++++
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTS 400
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 152/371 (40%), Gaps = 21/371 (5%)
Query: 49 LRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM--FNEMKNKGFKPDIVTYNVLAAGVCRN 106
+R + D+ Y+ +++ L + +F M M +G PD+ + R
Sbjct: 142 VREPGVTKDVGSYSVILRA--LGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRV 199
Query: 107 DEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----Y 162
R AI F+E ES GV+ ++ + ++ LC V A++ FN + ++ Y
Sbjct: 200 HYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSY 258
Query: 163 SAMVNGYCEASNNN-----------NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSN 211
+ M++G+ + + +G D G + + + E+F + +
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKH 318
Query: 212 KGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKH 271
KG++ ++ D ++M+ M EP+ YS ++ L K
Sbjct: 319 KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD 378
Query: 272 ARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY 331
A +F+ + RG P T+ + C A+ ++Q ++ G + Y +LL
Sbjct: 379 ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLL- 437
Query: 332 GSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
++ +W +M+++ DV Y +++GL + E+A+ + E+ + KG
Sbjct: 438 KRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC 497
Query: 392 PDKVTYTDMIS 402
P++ Y+ + S
Sbjct: 498 PNRFVYSRLSS 508
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 100/194 (51%), Gaps = 14/194 (7%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVG---RGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
YS++L AL G+ K + D G G PD+ T ++S+ R++ ++ A++LF+
Sbjct: 154 YSVILRAL---GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFE 210
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+ + G+K ++ LL + + AA V N K+ I D Y+++I+G
Sbjct: 211 ESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-----KKGNIPFDSCSYNIMISGW 265
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
K E+ ++ ++M++ G PD ++Y+ +I + G + ++ E+ D + KG P +
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDA 325
Query: 430 HIISAVNRSILKAR 443
++ +A+ + + AR
Sbjct: 326 NVYNAMICNFISAR 339
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 165/393 (41%), Gaps = 56/393 (14%)
Query: 33 LCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK-GFKP 91
L K + + A E+ +E+ + ++ + YT L+ Y G AF + MK+ +P
Sbjct: 160 LGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQP 219
Query: 92 DIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHF 151
D+ TY++L + + +M G+ PN+ T+ +I+ G+A+
Sbjct: 220 DVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY------GKAKMF- 272
Query: 152 NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSN 211
VE+ S ++ E DD CK D L
Sbjct: 273 -------VEMESTLIQMLGE---------DD-----------CKPDSWTMNSTL-RAFGG 304
Query: 212 KGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKH 271
G I E+C+ E +S +EP+ ++I+LD+ G K
Sbjct: 305 NGQIEMMENCY-------------------EKFQSSGIEPNIRTFNILLDSYGKSGNYKK 345
Query: 272 ARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY 331
++ + ++ +VTY +I+++ R LK+ LF+ M+ I P +T L+
Sbjct: 346 MSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVR 405
Query: 332 GSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
++ A+ D I + R ++ ++I LD+V ++ L++ + + + + + E M KG +
Sbjct: 406 -AYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFK 464
Query: 392 PDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
PDK+TY M+ Y G+ EL + S G
Sbjct: 465 PDKITYRTMVKAYRISGMTTHVKELHGVVESVG 497
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 181/430 (42%), Gaps = 53/430 (12%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + D K G +D+A + + VK D+ + ++ GY G DA +F +M+
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+ K D+VT++ +G + A+ +M S G++PN T ++ G SVG +
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 147 A-EAHF-----------------NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
E H N + ++ +++Y+ C+ + D SP
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK-----CKKVDTARAMFDSLSPKER 438
Query: 189 SEV-------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD-----IGK 236
V GY + KA EL E+ + D + F + L IGK
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEE-DCQTRPNAFTISCALVACASLAALRIGK 497
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
+ N P + + ++D G AR +FD+ + + + VT+T+++
Sbjct: 498 QIHAYALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAK----NEVTWTSLMT 552
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT-EI 355
Y +EAL +F +M+R G K D +T V+LY ++ +D + MK +
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYAC-SHSGMIDQGMEYFNRMKTVFGV 611
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS---LYYKKGLMKE 412
S Y+ L++ L + A+RL E+M +EP V + +S ++ K L +
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEM---PMEPPPVVWVAFLSCCRIHGKVELGEY 668
Query: 413 ASELLDEMSS 422
A+E + E++S
Sbjct: 669 AAEKITELAS 678
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 70/263 (26%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV-----GKTKHARSLFDSFVGRGFTP 286
G K + L M SL+ P + V A + G++ HA SL F+ F
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 287 --------------------------DVVTYTTMINSYCRMNSLKEALDLFQDMKRR-GI 319
DVV++ ++I SY ++ K AL++F M G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 320 KPDVITYTVLL-----YGS-----------------------------FKNAAALDVINT 345
+PD IT +L G+ + +D NT
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 346 IWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYY 405
++ +M DVV ++ ++ G + +EDA+RLFE M ++ ++ D VT++ IS Y
Sbjct: 286 VFSNMSVK----DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYA 341
Query: 406 KKGLMKEASELLDEMSSKGMTPS 428
++GL EA + +M S G+ P+
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPN 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 174/409 (42%), Gaps = 35/409 (8%)
Query: 39 VDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK-GFKPDIVTY- 96
+ DA ++ +E+ V D+ + ++I+ Y G A MF+ M N+ G +PD +T
Sbjct: 178 LSDARKVFDEMSV----WDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLV 233
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQD 156
NVL + + + S+ ++ N +++ G + EA F+ +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 157 KSVEIYSAMVNGYCEASN-----------NNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
K V ++AMV GY + D + GY + L +A +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDI--GK-----AMKLLETMRSLNVEPSQIMYSI 258
++ + G E + +L+ VG + GK A+K +R ++ +
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR- 317
++D K AR++FDS + DVVT+T MI Y + +AL+L +M
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPK--ERDVVTWTVMIGGYSQHGDANKALELLSEMFEED 470
Query: 318 -GIKPDVITYTVLLYGSFKNAAALDVINTIWR-DMKQTEISLDVVCYSVLINGLMKTDNY 375
+P+ T + L + AAL + I ++ + ++ + + LI+ K +
Sbjct: 471 CQTRPNAFTISCALVAC-ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSI 529
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKG 424
DA +F++M+ K ++VT+T +++ Y G +EA + DEM G
Sbjct: 530 SDARLVFDNMMAK----NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 177/396 (44%), Gaps = 41/396 (10%)
Query: 23 GVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFN 82
G +N++ K G ++A ++ + + + D+ +T +I G+ +L +A F+
Sbjct: 167 GSDWNVMISGYWKWGNKEEACKLFDMMP----ENDVVSWTVMITGFAKVKDLENARKYFD 222
Query: 83 EMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
M K +V++N + +G +N A+ F++M GV PN TT ++I CS
Sbjct: 223 RMPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA-CSF- 276
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
A+ R K ++ +N + + T + ++ + K ++ A
Sbjct: 277 ---RADPSLTRSLVKLIDEKRVRLNCFVK--------------TALLDM-HAKCRDIQSA 318
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
+F EL + ++ + T+ +GD+ A +L +TM NV + ++ ++
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTR---IGDMSSARQLFDTMPKRNV----VSWNSLIAG 371
Query: 263 LCHVGKTKHARSLFDSFVGRGFT-PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
H G+ A F+ + G + PD VT +++++ M L+ + +++ IK
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+ Y L++ + L ++ +MK+ DVV Y+ L + + + L
Sbjct: 432 NDSGYRSLIF-MYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNL 486
Query: 382 FEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
M D+G+EPD+VTYT +++ + GL+KE +
Sbjct: 487 LSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 125/258 (48%), Gaps = 18/258 (6%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K + VE A ++F ++S + K +++ G+ +A KL + M +V
Sbjct: 146 YVKHESVESARKVFDQISQR----KGSDWNVMISGYWKWGNKEEACKLFDMMPENDV--- 198
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ +++++ V ++AR FD R VV++ M++ Y + ++AL LF
Sbjct: 199 -VSWTVMITGFAKVKDLENARKYFD----RMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 313 DMKRRGIKPDVITYTVLLYG-SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
DM R G++P+ T+ +++ SF+ +L ++ + + + + L+ + L++ K
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSL--TRSLVKLIDEKRVRLNCFVKTALLDMHAK 311
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ + A R+F ++ G + + VT+ MIS Y + G M A +L D M + + + +
Sbjct: 312 CRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 432 ISAVNRSILKARKVQFHE 449
I+ + A ++F E
Sbjct: 369 IAGYAHNGQAALAIEFFE 386
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 143/349 (40%), Gaps = 74/349 (21%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V++ ++ K+ +++A + + + K++ + ++ GY G DA +F
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSV----VSWNAMLSGYAQNGFTEDALRLF 252
Query: 82 NEMKNKGFKPDIVTYNVLAAG--------VCRN-----DEARVAINNF------------ 116
N+M G +P+ T+ ++ + + R+ DE RV +N F
Sbjct: 253 NDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKC 312
Query: 117 DEMESD-------GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY 169
+++S G + N T +I G +G + A F+ + ++V +++++ GY
Sbjct: 313 RDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGY 372
Query: 170 C---------EASNNNNNYGDDKSP--TPIS-----------EVGYCKVDLVEKAYELFL 207
E + +YGD K T IS E+G C VD + K
Sbjct: 373 AHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK------ 426
Query: 208 ELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
I +S ++ L+ G++ +A ++ + M+ +V + Y+ + A
Sbjct: 427 -----NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDV----VSYNTLFTAFAAN 477
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
G +L G PD VTYT+++ + R LKE +F+ ++
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 49 LRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDE 108
+R I L+ Y +LI Y GNL +A +F+EMK + D+V+YN L N +
Sbjct: 424 IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGD 479
Query: 109 ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
+N +M+ +G+EP+ T+ ++ G + E + F +++ + Y+ M
Sbjct: 480 GVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM 536
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 247 LNVEPSQIMYSIVLDALCHV--GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
N P Q ++ + + C + + R +FDS P+V +M + +M+
Sbjct: 32 FNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVT----FPNVFVVNSMFKYFSKMDMA 87
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLL----------------YGSFKNAAALDVINTIWR 348
+ L L++ R GI PD ++ V++ G FK+ +VI ++
Sbjct: 88 NDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYV 147
Query: 349 DMKQTEISLDVV---------CYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ E + V ++V+I+G K N E+A +LF+ M E D V++T
Sbjct: 148 KHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP----ENDVVSWTV 203
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
MI+ + K ++ A + D M K + + ++S
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 100/204 (49%), Gaps = 5/204 (2%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+A+K+ E E Q+ Y+I ++A C + K A LFD V +GF VV Y+
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL--LYGSFKNAAALDVINTIWRDMK 351
+++ Y + L +A+ L MK+RG KP++ Y L ++G A L IW++MK
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHG---RAMDLRRAEKIWKEMK 485
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ ++ D V Y+ +I+ ++ E + L+++ + D+ M+ ++ K +
Sbjct: 486 RAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRID 545
Query: 412 EASELLDEMSSKGMTPSSHIISAV 435
E LL +M +G + + S+
Sbjct: 546 ELMRLLQDMKVEGTRLDARLYSSA 569
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 166/396 (41%), Gaps = 36/396 (9%)
Query: 1 MGMDSDVVDKFKEFKESGM-FL---DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDL 56
+G + VV+ F+EFK + FL G Y IV +L K G+ +A+E+ EE++ K I
Sbjct: 222 IGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPE 281
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGF--KPDIVTYNVLAAGVCRNDEARVAIN 114
+ Y+ LI+ + ++ +F E K P++ VL R +
Sbjct: 282 SSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLM--YVREGNMETTLE 339
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASN 174
M ++ I+ G + G AEA V++Y + CEA
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSK--QRGFAEA---------VKVYEWAMKEECEAG- 387
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG---DIAKEESCFKLLTKLCLV 231
+ I+ YC+++ KA LF E+ KG + + + K +
Sbjct: 388 --------QVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRL 439
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
D A++L+ M+ +P+ +Y+ ++D + A ++ PD V+Y
Sbjct: 440 SD---AVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSY 496
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
T+MI++Y R L+ ++L+Q+ + K D +++ G F + +D + + +DMK
Sbjct: 497 TSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMV-GVFSKTSRIDELMRLLQDMK 555
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMID 387
LD YS +N L + IR ++ D
Sbjct: 556 VEGTRLDARLYSSALNAL-RDAGLNSQIRWLQESFD 590
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 161/351 (45%), Gaps = 41/351 (11%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TTL+ Y G+LI A+ +F+EM + D+ ++N L AG+ + A A+ + ME+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVR----DVASWNALIAGLVSGNRASEAMELYKRMET 203
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
+G+ + T + +G V E E F+ + +V + +A ++ Y
Sbjct: 204 EGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMY------------ 251
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
S+ G+ V+KAY++F + + K + + ++T + G+ +A+++
Sbjct: 252 -------SKCGF-----VDKAYQVFEQFTGKKSVVTWNT---MITGFAVHGEAHRALEIF 296
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ + ++P + Y L A H G ++ S+F++ +G ++ Y +++ R
Sbjct: 297 DKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRA 356
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
L+EA D+ M + PD + + LL G+ + + +++ R++K+ ++ D
Sbjct: 357 GRLREAHDIICSMS---MIPDPVLWQSLL-GASEIYSDVEMAEIASREIKEMGVNNDGD- 411
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKE 412
+ +L N ++D R+ +DM E +V +S KG + E
Sbjct: 412 FVLLSNVYAAQGRWKDVGRVRDDM-----ESKQVKKIPGLSYIEAKGTIHE 457
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 22/258 (8%)
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
DL+ AY+LF E+ + D+A + L+ L +AM+L + M + + S++
Sbjct: 159 DLI-SAYKLFDEMPVR-DVASWNA---LIAGLVSGNRASEAMELYKRMETEGIRRSEVTV 213
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPD-VVTYTTMINSYCRMNSLKEALDLFQDMK 315
L A H+G K ++F G++ D V+ I+ Y + + +A +F+
Sbjct: 214 VAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFT 268
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
K V+T+ ++ G + A + I+ ++ I D V Y +
Sbjct: 269 G---KKSVVTWNTMITGFAVHGEAHRALE-IFDKLEDNGIKPDDVSYLAALTACRHAGLV 324
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS-------SKGMTPS 428
E + +F +M KG+E + Y ++ L + G ++EA +++ MS + + +
Sbjct: 325 EYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Query: 429 SHIISAVNRSILKARKVQ 446
S I S V + + +R+++
Sbjct: 385 SEIYSDVEMAEIASREIK 402
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
+ N D K G VD A ++ E+ K + + T+I G+ + G A +F++
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKK---SVVTWNTMITGFAVHGEAHRALEIFDK 298
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDE-ARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG 142
+++ G KPD V+Y + A CR+ ++ F+ M GVE N + +++ L G
Sbjct: 299 LEDNGIKPDDVSY-LAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAG 357
Query: 143 KVGEAE 148
++ EA
Sbjct: 358 RLREAH 363
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
++ + +LDA G A LFD R DV ++ +I N EA++L++
Sbjct: 145 LLCTTLLDAYSKNGDLISAYKLFDEMPVR----DVASWNALIAGLVSGNRASEAMELYKR 200
Query: 314 MKRRGIKPDVITYTVLL---------------YGSFKN------AAALDV------INTI 346
M+ GI+ +T L + + N AA+D+ ++
Sbjct: 201 METEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKA 260
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
++ +Q VV ++ +I G A+ +F+ + D G++PD V+Y ++
Sbjct: 261 YQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRH 320
Query: 407 KGLMKEASELLDEMSSKGM 425
GL++ + + M+ KG+
Sbjct: 321 AGLVEYGLSVFNNMACKGV 339
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 166/400 (41%), Gaps = 37/400 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F +++E G D +Y+ + L K D ++ +R +N+ + LI+ Y
Sbjct: 69 FHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGK 128
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G++ A +F+++ + I + N L + N E A + FD + + PNS +
Sbjct: 129 AGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVS 188
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEASNNNNNYGDDKSPT 186
++I+G A F+ + + SV Y++++ C N++ G KS
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCR----NDDMGKAKS-- 242
Query: 187 PISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMR 245
LE K I F LL K LC G+ +A KL+ M
Sbjct: 243 -------------------LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+P + Y I++ L G+ A+ L R PDVV Y ++N C +
Sbjct: 284 YRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVP 343
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNA---AALDVINTIWRDMKQTEISLDVVCY 362
EA + +M+ +G KP+ TY +++ G + + L+V+N + + VC
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLAS-RHCPTPATFVC- 401
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
++ GL+K N + A + E M K L + +++S
Sbjct: 402 --MVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 36/235 (15%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K V+KA ++F ++++ + +S L+ L G++ KA + + + + P+
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ ++I++ + A +FD + P VVTY ++I CR + + +A L +
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLE 245
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
DM ++ I+P+ +T + +L+ GL
Sbjct: 246 DMIKKRIRPNAVT------------------------------------FGLLMKGLCCK 269
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
Y +A +L DM +G +P V Y ++S K+G + EA LL EM + + P
Sbjct: 270 GEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 20/287 (6%)
Query: 160 EIYSAMVNGYCEASNNNNNYGDDKSPT---------------PISEVGYC----KVDLVE 200
+ S ++N C AS + + + PT P EV + +++ E
Sbjct: 4 RLSSVLINNQCIASQRHYHTSRPEKPTKKASSHEPTHKFTRKPWEEVPFLTDLKEIEDPE 63
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
+A LF + G S L+ KL + ++L +R NV + ++ ++
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
G A +F + + T+IN L++A F K ++
Sbjct: 124 QHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLR 183
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
P+ +++ +L+ G F + + ++ +M + E+ VV Y+ LI L + D+ A
Sbjct: 184 PNSVSFNILIKG-FLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
L EDMI K + P+ VT+ ++ KG EA +L+ +M +G P
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKP 289
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/278 (19%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 3 MDSDVVDKFKEF----KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDI 58
+D+ ++K K F K+ + + V++NI+ + A ++ +E+ + +
Sbjct: 162 VDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221
Query: 59 KHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
Y +LI C ++ A + +M K +P+ VT+ +L G+C E A +
Sbjct: 222 VTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASN 174
ME G +P + +++ L G++ EA+ ++ + ++ IY+ +VN C
Sbjct: 282 MEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTE-- 339
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
C+ V +AY + E+ KG + ++ C + D
Sbjct: 340 -------------------CR---VPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
+ +L M + P+ + ++ L G HA
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ +I Y + S+ +A+D+F + + + L+ N L+ + +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGE-LEKAKSFFDGA 177
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
K + + V +++LI G + ++E A ++F++M++ ++P VTY +I + M
Sbjct: 178 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 411 KEASELLDEMSSKGMTPSS 429
+A LL++M K + P++
Sbjct: 238 GKAKSLLEDMIKKRIRPNA 256
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 171/396 (43%), Gaps = 37/396 (9%)
Query: 60 HYTTLIKGYC----LQGNLIDAFYMFN--EMKNKGF----KPDIVTYNVLAAGVCRNDEA 109
H L G C +Q L+ + E+ K F + + V++N L G + E
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 110 RVAINNFDEM-ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNG 168
A FD++ E D V N +II G +G A + F+ + KS ++ ++ G
Sbjct: 187 DEARRVFDKIPEKDAVSWN-----LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 169 Y--CEASNNNNNYGDD-KSPTPISEV----GYCKVDLVEKAYELFLELSNKGDIAKEESC 221
Y C Y D +S + GY K+ V+ A ELF +S K + +
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDA-- 299
Query: 222 FKLLTKLCLVGDIGKAMKLLETM--RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
++ G A+KL M R+ ++P +I S V+ A +G T +
Sbjct: 300 --MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
G D + T++I+ Y + +A +F ++ ++ D ++Y+ ++ G N A
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMIMGCGINGMA 413
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
+ N+++ M + +I +VV ++ L++ + ++ + F M D LEP Y
Sbjct: 414 TEA-NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGI 472
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
M+ + + G ++EA EL+ M M P++ + A+
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMP---MQPNAGVWGAL 505
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
V D MKL L+ PS ++Y+IVL VGK K A F + G PD V
Sbjct: 171 VRDFFSWMKL-----QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVA 225
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
TM+ +Y R L ++ ++ R I Y +L K + VI+ +W +M
Sbjct: 226 CGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVID-LWLEM 284
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+ + + Y+++++ K E+A++ F +M G P++VTY+ +ISL K G
Sbjct: 285 VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDW 344
Query: 411 KEASELLDEMSSKGMTPSSH 430
++A L ++M S+G+ PS++
Sbjct: 345 EKAIGLYEDMRSQGIVPSNY 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL--YGSFKNAAALD 341
+ P VV YT ++ Y ++ +K A + F +M G +PD + +L Y + +A+
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAM- 242
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
T ++ +++ I L Y+ +++ L K + I L+ +M+++G+ P++ TYT ++
Sbjct: 243 --LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVV 300
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
S Y K+G +EA + EM S G P S+V
Sbjct: 301 SSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSV 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 153/382 (40%), Gaps = 70/382 (18%)
Query: 81 FNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
F+ MK + ++P +V Y ++ + + ++A F EM G EP++ + LC
Sbjct: 175 FSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM---LC 231
Query: 140 SVGKVGEAEA---HFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
+ + G A + +Q++ + + +++ N + + +G
Sbjct: 232 TYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHG---------------- 275
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
K +L+LE+ +G E + +++ G +A+K M+SL P ++ Y
Sbjct: 276 ----KVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTY 331
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
S V+ G + A L++ +G P T TM++ Y + + +AL LF DM+R
Sbjct: 332 SSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMER 391
Query: 317 RGIKPDVITYTVLL-----YGSFKNAA--------------------------------- 338
I D + +++ G F +A
Sbjct: 392 NKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVK 451
Query: 339 ALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
ALDVI MK +I L Y V++ K N + A F + GL PD +
Sbjct: 452 ALDVIEM----MKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCN 506
Query: 399 DMISLYYKKGLMKEASELLDEM 420
DM++LY + L ++A + ++
Sbjct: 507 DMLNLYTRLNLGEKAKGFIKQI 528
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/478 (19%), Positives = 199/478 (41%), Gaps = 48/478 (10%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
+ F+ ++G+ D + N + + +L + A +++ V + DI+ Y T ++ Y
Sbjct: 489 EAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVY 547
Query: 69 CLQG-------------------------NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGV 103
C +G L ++ ++ N+ ++ +V+A G+
Sbjct: 548 CKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGL 607
Query: 104 CRNDEARVAINNFDEMESD-----GVEPNSTTHKMIIEGLCSVGKVGEAEAHFN------ 152
N R+ N +E ++ + S+ +I G V +AE +
Sbjct: 608 MLN--LRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLG 665
Query: 153 -RLQDKSVEIYSAMVNGYCEASNNNNNY---GDDKSP--TPISEV--GYCKVDLVEKAYE 204
R++++++ A+ + Y G+ K+P + I + Y + +E AY
Sbjct: 666 LRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYG 725
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
LF+E + KG + L+ L G +A + T N+E + Y+ ++ A+
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
GK + A +++ G + TY TMI+ Y R L +A+++F + +R G+ D
Sbjct: 786 EAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEK 845
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
YT ++ K + + +++ +M++ I Y++++ + + + L +
Sbjct: 846 IYTNMIMHYGKGGKMSEAL-SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQA 904
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKA 442
M G D TY +I +Y + EA + + + KG+ S S++ +++KA
Sbjct: 905 MERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKA 962
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 184/446 (41%), Gaps = 48/446 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCK---LGKVDD-AIEMREELRVKNIDLD 57
G S ++ +K +E + L YN + +L K GKV D +EM EE + +
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEE----GVPPN 292
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFD 117
YT ++ Y QG +A F EMK+ GF P+ VTY+ + + + + AI ++
Sbjct: 293 EFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYE 352
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
+M S G+ P++ T ++ +A + F A N
Sbjct: 353 DMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF--------------------ADMERN 392
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
D+ + Y K+ L A +F E +A E++ + G++ KA
Sbjct: 393 KIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKA 452
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINS 297
+ ++E M++ ++ S+ Y ++L + A F + G PD + M+N
Sbjct: 453 LDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNL 511
Query: 298 YCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTE 354
Y R+N ++A + + + D+ Y + K A A D+I + R+ + +
Sbjct: 512 YTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKD 571
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFE-DMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
V + ++ + K D +E + + + D++ GL M++L K+G + E
Sbjct: 572 NRF-VQTLAESMHIVNKHDKHEAVLNVSQLDVMALGL---------MLNLRLKEGNLNET 621
Query: 414 SELLDEMSSKGMTPSSHIISAVNRSI 439
+L+ M + SAVNR I
Sbjct: 622 KAILNLMFKTDLGS-----SAVNRVI 642
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 29/277 (10%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
E + LD V YN + A+ + GK+ A E+ E + + I+ Y T+I Y L
Sbjct: 767 EKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLD 826
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
A +F+ + G D Y + + + A++ F EM+ G++P + ++ M++
Sbjct: 827 KAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Query: 136 EGLCSVGKVG-------EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPI 188
+ +C+ ++ +A R D S Y ++ Y E+S +K+ T +
Sbjct: 887 K-ICATSRLHHEVDELLQAMERNGRCTDLST--YLTLIQVYAESSQFAEA---EKTITLV 940
Query: 189 SEVG--------------YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GD 233
E G K ++E+A + ++S G I+ + +C + + K + GD
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAG-ISPDSACKRTILKGYMTCGD 999
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
K + E M +VE + + S+V D VGK +
Sbjct: 1000 AEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQ 1036
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 151/370 (40%), Gaps = 37/370 (10%)
Query: 76 DAFYMFNEMK-NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
D+ FN + N + P + Y LA + + + +M+ ++ + T I
Sbjct: 93 DSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFI 152
Query: 135 IEGLCSVGKVGEAEAHFNRLQ-----DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
IE G V +A FN + ++V++Y+++++ C+
Sbjct: 153 IEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD------------------ 194
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
V + AY L + KG + + L+ C G + +A + L+ M
Sbjct: 195 ------VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGF 248
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P ++++ L + G + A+ + GF PD+ T+ +I + + ++ ++
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAA---ALDVINTIWRDMKQTEISLDVVCYSVLI 366
++ + G+ D+ TY L+ K A ++N D + SL Y+ +I
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSL----YAPII 364
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
G+ + ++DA F DM K P++ YT +I++ + G +A+ L EM+ G+
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 427 PSSHIISAVN 436
P S V
Sbjct: 425 PISRCFDMVT 434
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 147/378 (38%), Gaps = 69/378 (18%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL-RVKNIDLDIKHYTTLIKGYC 69
K+ K+ + + G + + K G VD A+E+ + + + Y +L+ C
Sbjct: 134 LKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALC 193
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
A+ + M KG KPD TY +L G C + + A DEM G P +
Sbjct: 194 DVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPAR 253
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
++IEGL + G + A+ E+ S M G
Sbjct: 254 GRDLLIEGLLNAGYLESAK-----------EMVSKMTKG--------------------- 281
Query: 190 EVGYCKVDLVEKAYELFLE-LSNKGDIAKEESCFKLLTKLCLVG---DIGKAMKLLETMR 245
G+ D+ + + + +E +S G++ E C ++ C +G DI
Sbjct: 282 --GFVP-DI--QTFNILIEAISKSGEV---EFCIEMYYTACKLGLCVDIDT--------- 324
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
Y ++ A+ +GK A L ++ V G P Y +I CR
Sbjct: 325 ----------YKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD 374
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV--CYS 363
+A F DMK + P+ YT+L+ + +D N + ++ TE+ L + C+
Sbjct: 375 DAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYL---VEMTEMGLVPISRCFD 431
Query: 364 VLINGLMKTDNYEDAIRL 381
++ +GL ++ A+R+
Sbjct: 432 MVTDGLKNGGKHDLAMRI 449
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR--GFTPDVVTYTTM 294
AM+ E M S + ++ +L+A H LFD R PD ++Y +
Sbjct: 121 AMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGIL 180
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
I SYC + ++A+++ + M+ +G++ I +T +L +K L+V + +W +M +
Sbjct: 181 IKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE-LEVADNLWNEMVKKG 239
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
LD Y+V I K ++ E L E+M GL+PD ++Y +++ Y ++G++ EA
Sbjct: 240 CELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAK 298
Query: 415 ELLDEMSSKGMTPSS 429
++ + + P++
Sbjct: 299 KVYEGLEGNNCAPNA 313
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYS--IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
D KA+K+ + + P Y+ + + L + +L +S +
Sbjct: 45 DPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPF 104
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
Y+T+I SY + + A+ F+ M + G +++ LL ++ D + ++ ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACL-HSKNFDKVPQLFDEI 163
Query: 351 KQ--TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
Q +I D + Y +LI + E AI + M KG+E + +T ++S YKKG
Sbjct: 164 PQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 409 LMKEASELLDEMSSKG 424
++ A L +EM KG
Sbjct: 224 ELEVADNLWNEMVKKG 239
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)
Query: 148 EAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD----DKSPTPISEVGYCKV------- 196
E+H N + K YS ++ Y +AS N+ D+ TP S V + +
Sbjct: 91 ESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHS 150
Query: 197 DLVEKAYELFLELSNK-GDIAKEESCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQI 254
+K +LF E+ + I ++ + +L K C G KA++++ M+ +E + I
Sbjct: 151 KNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTI 210
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
++ +L +L G+ + A +L++ V +G D Y I S + S + +L ++M
Sbjct: 211 AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEM 269
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
G+KPD I+Y L+ ++ LD ++ ++ + + + LI L +
Sbjct: 270 SSMGLKPDTISYNYLM-TAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRL 328
Query: 375 YEDAIRLFEDMIDKGLEPD 393
YE +F+ + PD
Sbjct: 329 YEQGYAIFKKSVYMHKIPD 347
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D ++Y I+ + C G + AIE+ +++ K +++ +TT++ +G L A ++
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
NEM KG + D YNV + RV +EM S G++P++ ++ ++ C
Sbjct: 233 NEMVKKGCELDNAAYNVRIMSAQKESPERVK-ELIEEMSSMGLKPDTISYNYLMTAYCER 291
Query: 142 GKVGEAEAHFNRLQ 155
G + EA+ + L+
Sbjct: 292 GMLDEAKKVYEGLE 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 108/278 (38%), Gaps = 23/278 (8%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y+TLI+ Y A F +M G V++N L + FDE+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 121 S--DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
+ + P+ ++ ++I+ C G +A ++Q K +E+ +
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAF------------ 212
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
T I Y K +L E A L+ E+ KG + + + + +
Sbjct: 213 -------TTILSSLYKKGEL-EVADNLWNEMVKKG-CELDNAAYNVRIMSAQKESPERVK 263
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
+L+E M S+ ++P I Y+ ++ A C G A+ +++ G P+ T+ T+I
Sbjct: 264 ELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN 336
C ++ +F+ PD T L+ G +N
Sbjct: 324 CYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVEN 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ ++ + GM + +A+ + +L K G+++ A + E+ K +LD Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
I + + + EM + G KPD ++YN L C A ++ +E
Sbjct: 248 NVRIMS-AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 122 DGVEPNSTTHKMIIEGLC 139
+ PN+ T + +I LC
Sbjct: 307 NNCAPNAATFRTLIFHLC 324
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 195/456 (42%), Gaps = 61/456 (13%)
Query: 29 VFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT----TLIKGYCLQGNLIDAFYMFNEM 84
F ++ K +++E+ E+L + L T L+ Y GNLI A ++F+ M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
+ D VTYN L G+ + A+ F M DG+EP+S T ++ + G +
Sbjct: 350 SQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 145 GEAE---AHFNRLQDKSV-EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
+ A+ +L S +I A++N Y + ++ D T + V V LV
Sbjct: 406 FRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETAL-DYFLETEVENVVLWNVMLV- 463
Query: 201 KAYELFLELSNKGDIAKE---------ESCFKLLTKLCL-VGDIGKAMKLLETMRSLNVE 250
AY L +L N I ++ + + + K C+ +GD+ ++ + N +
Sbjct: 464 -AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
+ + S+++D +GK A + F G+ DVV++TTMI Y + N +AL
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK----DVVSWTTMIAGYTQYNFDDKALTT 578
Query: 311 FQDMKRRGIKPDVITYTVLLYG--------------------------SFKNA-----AA 339
F+ M RGI+ D + T + F+NA +
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
I + +QTE D + ++ L++G ++ N E+A+R+F M +G++ + T+
Sbjct: 639 CGKIEESYLAFEQTEAG-DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ + MK+ ++ ++ G + + +A+
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 133/359 (37%), Gaps = 62/359 (17%)
Query: 21 LDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID-AFY 79
L+ +++ D KLGK+D A + + ++ D+ +TT+I GY Q N D A
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWD----ILIRFAGKDVVSWTTMIAGYT-QYNFDDKALT 577
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES-DGVEPNSTTHKMIIEGL 138
F +M ++G + D V A C +A G + ++
Sbjct: 578 TFRQMLDRGIRSDEVGLTN-AVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 636
Query: 139 CSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNN----------------NNNYGDD 182
GK+ E+ F + + ++A+V+G+ ++ NN NNN+
Sbjct: 637 SRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFG 696
Query: 183 KSPTPISEVG------------------------------YCKVDLVEKAYELFLELSNK 212
+ SE Y K + A + FLE+S K
Sbjct: 697 SAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 213 GDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
++ S ++ G +A+ + M NV P+ + VL A H+G
Sbjct: 757 NEV----SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKG 812
Query: 273 RSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+ F+S G +P Y +++ R L A + Q+M IKPD + + LL
Sbjct: 813 IAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP---IKPDALVWRTLL 868
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 148/406 (36%), Gaps = 81/406 (19%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTY 96
G +D+ ++ ++ +D + L Y +G+L AF +F+EM + I T+
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER----TIFTW 154
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG-------EAEA 149
N + + + F M S+ V PN T ++E C G V A
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIHARI 213
Query: 150 HFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLEL 209
+ L+D +V + + +++ Y S G+ VDL + ++
Sbjct: 214 LYQGLRDSTV-VCNPLIDLY-------------------SRNGF--VDLARRVFDGL--- 248
Query: 210 SNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKT 269
+ S +++ L +A++L M L + P+ +S VL A +
Sbjct: 249 ----RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 270 KHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
+ L + GF+ D +++ Y + +L A +F +M +R D +TY
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTY--- 357
Query: 330 LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKG 389
+ LINGL + E A+ LF+ M G
Sbjct: 358 ---------------------------------NTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 390 LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
LEPD T ++ G + +L + G ++ I A+
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 140/364 (38%), Gaps = 86/364 (23%)
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
D +E+ G+ PN T K ++EG N D+ +++S ++
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKT----------NGSLDEGRKLHSQILK--------- 113
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDI---------AKEESCF---KL 224
G D + L EK ++ +L KGD+ E + F K+
Sbjct: 114 --LGLDSNGC-----------LSEKLFDFYL---FKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK-------HARSLF- 276
+ +L IG+ L M S NV P++ +S VL+A C G HAR L+
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIHARILYQ 216
Query: 277 -------------DSFVGRGFT------------PDVVTYTTMINSYCRMNSLKEALDLF 311
D + GF D ++ MI+ + EA+ LF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
DM GI P ++ +L + K +L++ + + + S D + L++
Sbjct: 277 CDMYVLGIMPTPYAFSSVL-SACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
N A +F +M + D VTY +I+ + G ++A EL M G+ P S+
Sbjct: 336 LGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 432 ISAV 435
++++
Sbjct: 392 LASL 395
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 68/372 (18%)
Query: 81 FNEMKNKGFKP-DIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
FN +K+K P + + YNV + + ++ EM DGVE ++ T+ II
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 232
Query: 140 SVGKVGEAEAHFNRLQDKSV---EI-YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
+A F R+ + E+ YSA+++ Y ++ K
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG---------------------K 271
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC-LVGDIGKAMKLLETMRSLNVEPSQI 254
V+ V YE + K D F +L K+ GD +L+ M+S++V+P+ +
Sbjct: 272 VEEVLSLYERAVATGWKPDAI----AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
+Y+ +L+A+ GK ARSLF+ + G TP+ T T ++ Y + ++AL L+++M
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
K + D I Y LL N A +I L+
Sbjct: 388 KAKKWPMDFILYNTLL-----NMCA--------------DIGLE---------------- 412
Query: 375 YEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIIS 433
E+A RLF DM + PD +YT M+++Y G ++A EL +EM G+ + +
Sbjct: 413 -EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCT 471
Query: 434 AVNRSILKARKV 445
+ + + KA+++
Sbjct: 472 CLVQCLGKAKRI 483
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 131/315 (41%), Gaps = 29/315 (9%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQG 72
E + G+ LD + Y+ + + + AIE E + + D Y+ ++ Y G
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 73 NLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
+ + ++ G+KPD + ++VL + EM+S V+PN +
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVG 192
++E + GK G A + FN + + + ++K+ T + ++
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLT-------------------PNEKTLTALVKI- 370
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLL-TKLCLVGDIG---KAMKLLETMR-SL 247
Y K A +L+ E+ K K F L T L + DIG +A +L M+ S+
Sbjct: 371 YGKARWARDALQLWEEMKAK----KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESV 426
Query: 248 NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
P Y+ +L+ GK + A LF+ + G +V+ T ++ + + +
Sbjct: 427 QCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDV 486
Query: 308 LDLFQDMKRRGIKPD 322
+ +F +RG+KPD
Sbjct: 487 VYVFDLSIKRGVKPD 501
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 296 NSYCRMNSLKE---ALDLFQDMKRRGIKP-DVITYTVLLYGSFKNAAALDVINTIWRDMK 351
N+ +NSL+E F +K + + P + I Y V + S + +I + +M
Sbjct: 155 NALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTM-KSLRFGRQFQLIEEMALEMV 213
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ + LD + YS +I + + Y AI FE M GL PD+VTY+ ++ +Y K G ++
Sbjct: 214 KDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVE 273
Query: 412 EASELLDEMSSKGMTPSSHIISAVNR 437
E L + + G P + S + +
Sbjct: 274 EVLSLYERAVATGWKPDAIAFSVLGK 299
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 149/361 (41%), Gaps = 34/361 (9%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ T+I+GY + AF +FN+++ KG D ++ R +
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL-QDKSVEIYSAMVNGYCEASNNNNNY 179
G + +I C GK+ +A F+ + Q +S ++NGY + S
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALAL 212
Query: 180 GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMK 239
D SEV V V +S+ GD++ ES L K+ L D+
Sbjct: 213 -DLFRIMRKSEV----VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 240 LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYC 299
L+ MY G AR +FD + + DVVT+ MI+ Y
Sbjct: 268 LIG------------MYG-------KTGGISSARRIFDCAIRK----DVVTWNCMIDQYA 304
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDV 359
+ L+E + L + MK +KP+ T+ LL + AA V T+ +++ I+LD
Sbjct: 305 KTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAF-VGRTVADLLEEERIALDA 363
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ + L++ K E A+ +F M DK D ++T MIS Y GL +EA L ++
Sbjct: 364 ILGTALVDMYAKVGLLEKAVEIFNRMKDK----DVKSWTAMISGYGAHGLAREAVTLFNK 419
Query: 420 M 420
M
Sbjct: 420 M 420
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 32/250 (12%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC---LVGDIGKAMKLLETMRSLN 248
GY D E+A+ +F +L KG + + F K C L IG E + +
Sbjct: 99 GYSISDEPERAFSVFNQLRAKG-LTLDRFSFITTLKSCSRELCVSIG------EGLHGIA 151
Query: 249 VEPSQIMYSIVLDALCH----VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+ ++++ + +AL H GK AR +FD + D VT++T++N Y +++
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQ---SVDAVTFSTLMNGYLQVSKK 208
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLL-----YGSFKNAAALDVINTIWRDMKQTEISLDV 359
ALDLF+ M++ + +V T L G A + V+ + + LD+
Sbjct: 209 ALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI------KIGLDLDL 262
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ LI KT A R+F+ I K D VT+ MI Y K GL++E LL +
Sbjct: 263 HLITALIGMYGKTGGISSARRIFDCAIRK----DVVTWNCMIDQYAKTGLLEECVWLLRQ 318
Query: 420 MSSKGMTPSS 429
M + M P+S
Sbjct: 319 MKYEKMKPNS 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 61/275 (22%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
D+ + +I Y G L + ++ +MK + KP+ T+ L + ++ A V
Sbjct: 292 DVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA 351
Query: 117 DEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
D +E + + ++ +++ VG + +A FNR++DK V+ ++AM++GY
Sbjct: 352 DLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGY------- 404
Query: 177 NNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
+G L +A LF NK +EE+C
Sbjct: 405 GAHG-----------------LAREAVTLF----NK---MEEENC--------------- 425
Query: 237 AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFV-GRGFTPDVVTYTTMI 295
V P++I + +VL+A H G F V FTP V Y ++
Sbjct: 426 -----------KVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVV 474
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+ R L+EA +L +++ I D + LL
Sbjct: 475 DLLGRAGQLEEAYELIRNLP---ITSDSTAWRALL 506
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 150/353 (42%), Gaps = 13/353 (3%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G + + + + C+ G V +A ++ + I + + ++ L+ G+ G A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
+FN+M G P++VTY L G A +++S+G+ P+ ++I
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 138 LCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNN------NNYGDDKSPTP 187
+G+ EA F L+ + + ++++++ C + + + G D
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVT 386
Query: 188 ISEVGYCKVDLVEKAYEL-FLELSNKGDIAKEESCFKL-LTKLCLVGDIGKAMKLLETMR 245
+ + C + +Y L L + + D A + + + L+ LC G A+K+ + +
Sbjct: 387 GNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIII 446
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+S ++D+L +GK A LF + + DVV+YT I R ++
Sbjct: 447 KEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIE 506
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLD 358
EA L DMK GI P+ TY ++ G K + + I R+ Q + LD
Sbjct: 507 EAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKET-EKVRKILRECIQEGVELD 558
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 179/429 (41%), Gaps = 39/429 (9%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNI---DLDIKHYTTLIKGYCLQGNLIDAFYMF 81
A N++ D KL V+ A+E+ E +R +N D+ + H+ + +G +G+L+ +
Sbjct: 145 AMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCS--RGG--RGDLVGVKIVL 200
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
M +GF P+ + + CR A M G+ + M++ G
Sbjct: 201 KRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRS 260
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV----GYCKVD 197
G+ K+V++++ M+ C SP ++ G+ +
Sbjct: 261 GE-----------PQKAVDLFNKMIQIGC-------------SPNLVTYTSLIKGFVDLG 296
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYS 257
+V++A+ + ++ ++G C ++ +G +A K+ ++ + P Q ++
Sbjct: 297 MVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFA 356
Query: 258 IVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
+L +LC GK + G G D+VT + N + ++ AL + M +
Sbjct: 357 SILSSLCLSGKFDLVPRITH---GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
D TYTV L + A I +++ + + + LD +S +I+ L++ Y
Sbjct: 414 DFALDCYTYTVYLSALCRGGAPRAAIK-MYKIIIKEKKHLDAHFHSAIIDSLIELGKYNT 472
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNR 437
A+ LF+ I + D V+YT I + ++EA L +M G+ P+ +
Sbjct: 473 AVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIIS 532
Query: 438 SILKARKVQ 446
+ K ++ +
Sbjct: 533 GLCKEKETE 541
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 183/454 (40%), Gaps = 57/454 (12%)
Query: 6 DVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRV---KNIDLDIKHYT 62
+VV+ E E F + +++I C G D + ++ L+ + + + +
Sbjct: 157 NVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+++ C G + +AF + M G + +++L +G R+ E + A++ F++M
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQI 276
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
G PN T+ +I+G +G V EA +++Q + + + N
Sbjct: 277 GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT---------- 326
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD--------- 233
Y ++ E+A ++F L + + + + +L+ LCL G
Sbjct: 327 ----------YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH 376
Query: 234 -IGK----------------------AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTK 270
IG A+K+L M + Y++ L ALC G +
Sbjct: 377 GIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPR 436
Query: 271 HARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
A ++ + D ++ +I+S + A+ LF+ DV++YTV +
Sbjct: 437 AAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAI 496
Query: 331 YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL 390
G + A ++ ++ DMK+ I + Y +I+GL K E ++ + I +G+
Sbjct: 497 KGLVR-AKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGV 555
Query: 391 EPDKVTYTDMISLYYK-KGLMKEASELLDEMSSK 423
E D T + SL + +G E + ++ S+
Sbjct: 556 ELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKSE 589
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 109/250 (43%), Gaps = 8/250 (3%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
+ + + +KA E++ +S+ G + + ++ + + A+++ E +R N
Sbjct: 118 FWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNF--- 174
Query: 253 QIMYSIVLDALCHVGKTKH---ARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+ I L C G + + +G GF P+ + ++ CR + EA
Sbjct: 175 -FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQ 233
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+ M GI V +++L+ G F++ ++ ++ M Q S ++V Y+ LI G
Sbjct: 234 VVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVD-LFNKMIQIGCSPNLVTYTSLIKGF 292
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+ ++A + + +GL PD V MI Y + G +EA ++ + + + P
Sbjct: 293 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 352
Query: 430 HIISAVNRSI 439
+ +++ S+
Sbjct: 353 YTFASILSSL 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 117/272 (43%), Gaps = 22/272 (8%)
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESC---- 221
+N + + NN + DD++ + V +VEK + + + K C
Sbjct: 56 LNFFFWCAKQNNYFHDDRAFDHM-------VGVVEKLTREYYSIDRIIERLKISGCEIKP 108
Query: 222 --FKLLTKLCLVGDI-GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDS 278
F LL ++ G I KA+++ M S P+ ++++D + A +F+
Sbjct: 109 RVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEG 168
Query: 279 FVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR---RGIKPDVITYTVLLYGSFK 335
R F ++ ++ +C + + + +KR G P+ + +L +
Sbjct: 169 IRFRNF----FSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCR 224
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
+ + M + IS+ V +S+L++G ++ + A+ LF MI G P+ V
Sbjct: 225 TGCVSEAFQVVGL-MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLV 283
Query: 396 TYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
TYT +I + G++ EA +L ++ S+G+ P
Sbjct: 284 TYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/312 (17%), Positives = 134/312 (42%), Gaps = 25/312 (8%)
Query: 112 AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE 171
AI + M S G PN+ M+++ + V A F ++ ++ + ++ +C
Sbjct: 127 AIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCS 186
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
+ G V +V K + +G E ++L C
Sbjct: 187 RGGRGDLVG---------------VKIVLK------RMIGEGFYPNRERFGQILRLCCRT 225
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + +A +++ M + S ++S+++ G+ + A LF+ + G +P++VTY
Sbjct: 226 GCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTY 285
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
T++I + + + EA + ++ G+ PD++ ++++ ++ + ++ ++
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH-TYTRLGRFEEARKVFTSLE 344
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
+ ++ D ++ +++ L + ++ R+ + G + D VT + + + K G
Sbjct: 345 KRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFSKIGYNS 401
Query: 412 EASELLDEMSSK 423
A ++L MS K
Sbjct: 402 YALKVLSIMSYK 413
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 181/432 (41%), Gaps = 39/432 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ + +G+ + + A+ KL + + + + +D D +LI GY
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G A +F+ ++K D+VT+ + G RN A A+ F EM+ GV N T
Sbjct: 151 SGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMT 206
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNG-YCEASNNNNNYGDDKSPTPIS 189
++ L + GKV + F R V+G Y E + S +
Sbjct: 207 ---VVSVLKAAGKV--EDVRFGR-----------SVHGLYLETGRVKCDVFIGSSLVDM- 249
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
Y K + A ++F E+ ++ + + C K M + E M +V
Sbjct: 250 ---YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF----DKGMLVFEEMLKSDV 302
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
P++ S VL A HVG R + + + TT+I+ Y + L+EA+
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+F+ + + +V T+T ++ G + A D + + M + +S + V + +++
Sbjct: 363 VFERLHEK----NVYTWTAMINGFAAHGYARDAFDLFY-TMLSSHVSPNEVTFMAVLSAC 417
Query: 370 MKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
E+ RLF M + +EP Y M+ L+ +KGL++EA L++ M M P+
Sbjct: 418 AHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP---MEPT 474
Query: 429 SHIISAVNRSIL 440
+ + A+ S L
Sbjct: 475 NVVWGALFGSCL 486
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 175/430 (40%), Gaps = 80/430 (18%)
Query: 2 GMDSDVV---DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDI 58
G SD++ + K+ E+ + +D N V K G +D A + +E+ K D
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK----DS 300
Query: 59 KHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE 118
Y +I GY G + +A +F+EM++ G T+N + +G+ +N+ IN+F E
Sbjct: 301 VTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFRE 356
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKV-GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
M G PN+ T ++ L + G E H A+ NG +NN
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH-----------AFAIRNG-----ADNN 400
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
Y T I + Y K+ + A +F ++ IA ++T + GD A
Sbjct: 401 IY----VTTSIID-NYAKLGFLLGAQRVFDNCKDRSLIAWT----AIITAYAVHGDSDSA 451
Query: 238 MKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMIN 296
L + M+ L +P + + VL A H G + A+ +FDS + + P V Y M++
Sbjct: 452 CSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVS 511
Query: 297 SYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEIS 356
R L +A++ M I P + LL G+ ++ D++ +
Sbjct: 512 VLSRAGKLSDAMEFISKMP---IDPIAKVWGALLNGA-----------SVLGDLEIARFA 557
Query: 357 LDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV-TYTDMISLYYKKGLMKEASE 415
D RLFE +EP+ YT M +LY + G +EA
Sbjct: 558 CD---------------------RLFE------MEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 416 LLDEMSSKGM 425
+ ++M G+
Sbjct: 591 VRNKMKRIGL 600
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 272 ARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR-RGIKPDVITYTVLL 330
AR +FD R DVV++ +MI+ Y + S ++ +++ M KP+ +T + +
Sbjct: 186 ARKVFDEMSER----DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVT-VISV 240
Query: 331 YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL 390
+ + ++ L + + M + I +D+ + +I K + + A LF++M +K
Sbjct: 241 FQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-- 298
Query: 391 EPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
D VTY +IS Y GL+KEA L EM S G++ + +IS +
Sbjct: 299 --DSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 148/366 (40%), Gaps = 35/366 (9%)
Query: 57 DIKHYTTLIKGYCLQGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINN 115
D+ + ++I GY G+ D M+ M FKP+ VT + ++ + +
Sbjct: 197 DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEV 256
Query: 116 FDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNN 175
+M + ++ + + +I G + A A F+ + +K Y A+++GY
Sbjct: 257 HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHG-- 314
Query: 176 NNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
LV++A LF E+ + G + +++ L
Sbjct: 315 ----------------------LVKEAMALFSEMESIG----LSTWNAMISGLMQNNHHE 348
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
+ + M P+ + S +L +L + K + + + G ++ T++I
Sbjct: 349 EVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
++Y ++ L A +F + K R + I +T ++ ++ D +++ M+
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSL----IAWTAII-TAYAVHGDSDSACSLFDQMQCLGT 463
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEAS 414
D V + +++ + + + A +F+ M+ K +EP Y M+S+ + G + +A
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 415 ELLDEM 420
E + +M
Sbjct: 524 EFISKM 529
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL-NVEP 251
Y K D +E A ++F E+S + D+ S +++ G K+ + M + + +P
Sbjct: 177 YTKCDNIESARKVFDEMSER-DVVSWNS---MISGYSQSGSFEDCKKMYKAMLACSDFKP 232
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ + V A + + D+ +I Y + SL A LF
Sbjct: 233 NGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF 292
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+M + D +TY ++ G + + + ++ +M+ S+ + ++ +I+GLM+
Sbjct: 293 DEMSEK----DSVTYGAIISGYMAHGLVKEAM-ALFSEME----SIGLSTWNAMISGLMQ 343
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMI-SLYYKKGL 409
+++E+ I F +MI G P+ VT + ++ SL Y L
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL 382
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 166/380 (43%), Gaps = 27/380 (7%)
Query: 69 CLQGNLIDAFYMFNEM-KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM--ESDGVE 125
C + A FN + + GF+ T+N + + + E ++ + M ++ V
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV- 114
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE---IYSAMVNGYCEASN-------- 174
PN T +++ + + V EA +++L D ++ + +V+ CE +
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELC 174
Query: 175 ---NNNNYGDDKSPTPISEV---GYCKVDLVEKAYELFLELSNKGDIAKEESCFKL-LTK 227
N G S T I + G+ K+ K E + ++ +G + K+ + + +
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEG-VTKDLFSYSIYMDI 233
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
+C G KA+KL + M+S ++ + Y+ V+ A+ + +F RG P+
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
V T+ T+I C +++A + +M +RG +PD ITY L K + L +
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGR-- 351
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
M ++ + + Y +L+ + + + +++ M + G PD Y +I +K
Sbjct: 352 --MIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQK 409
Query: 408 GLMKEASELLDEMSSKGMTP 427
G++ A E +EM +G++P
Sbjct: 410 GMLDMAREYEEEMIERGLSP 429
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
+N++ KLG E +++ + + D+ Y+ + C G A ++ EMK
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMK 251
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
++ K D+V YN + + + I F EM G EPN TH II+ LC G++
Sbjct: 252 SRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMR 311
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE- 204
+A + + + + P S C +EK E
Sbjct: 312 DAYRMLDEMPKRGCQ--------------------------PDSITYMCLFSRLEKPSEI 345
Query: 205 --LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
LF + G K ++ L+ K G + + + +TM+ P Y+ V+DA
Sbjct: 346 LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA 405
Query: 263 LCHVGKTKHARSLFDSFVGRGFTP 286
L G AR + + RG +P
Sbjct: 406 LIQKGMLDMAREYEEEMIERGLSP 429
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF--DSFVGRGFT-PDVVT 290
+ +A+ + + N+ Y++V DALC A L + +G GF+ +
Sbjct: 133 VQEAIDAYDKLDDFNLRDETSFYNLV-DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 191
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ ++ + ++ + + ++ M G+ D+ +Y++ + K+ + ++++M
Sbjct: 192 HNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVK-LYKEM 250
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
K + LDVV Y+ +I + + E IR+F +M ++G EP+ T+ +I L + G M
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 411 KEASELLDEMSSKGMTPSS 429
++A +LDEM +G P S
Sbjct: 311 RDAYRMLDEMPKRGCQPDS 329
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 4/212 (1%)
Query: 224 LLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRG 283
+L +G GK + + M + V YSI +D +C GK A L+ R
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 284 FTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVI 343
DVV Y T+I + ++ + +F++M+ RG +P+V T+ ++ ++ D
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 344 NTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISL 403
+ +M + D + Y L + L K + + LF MI G+ P TY ++
Sbjct: 315 RML-DEMPKRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRK 370
Query: 404 YYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ + G ++ + M G TP S +AV
Sbjct: 371 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAV 402
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G V +KE K M LD VAYN V A+ V+ I + E+R + + ++ +
Sbjct: 238 GKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATH 297
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T+IK C G + DA+ M +EM +G +PD +TY L + + + E ++ F M
Sbjct: 298 NTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE---ILSLFGRMIR 354
Query: 122 DGVEPNSTTHKMIIEGLCSVG 142
GV P T+ M++ G
Sbjct: 355 SGVRPKMDTYVMLMRKFERWG 375
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/471 (21%), Positives = 190/471 (40%), Gaps = 113/471 (23%)
Query: 25 AYNIVFDAL----CKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM 80
+YN + A+ C LGK A E+ ++ KN Y T+I G+ G +A ++
Sbjct: 114 SYNAMITAMIKNKCDLGK---AYELFCDIPEKNA----VSYATMITGFVRAGRFDEAEFL 166
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
+ E K F+ D V NVL +G R + A+ F M V S+ ++ G C
Sbjct: 167 YAETPVK-FR-DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSS----MVHGYCK 220
Query: 141 VGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
+G++ +A + F+R+ +++V ++AM++GY +A E
Sbjct: 221 MGRIVDARSLFDRMTERNVITWTAMIDGYFKAG------------------------FFE 256
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCL------------------------------ 230
+ LFL + +GD+ + ++ K C
Sbjct: 257 DGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSL 316
Query: 231 ------VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-- 282
+G +G+A + M++ + + ++ ++ L + A LF+ G+
Sbjct: 317 MSMYSKLGYMGEAKAVFGVMKNKD----SVSWNSLITGLVQRKQISEAYELFEKMPGKDM 372
Query: 283 -----------------------GFTP--DVVTYTTMINSYCRMNSLKEALDLFQDMKRR 317
G P D +T+T MI+++ +EAL F M ++
Sbjct: 373 VSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 318 GIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
+ P+ T++ +L + A ++ + R +K ++ D+ + L++ K N D
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN-DLSVQNSLVSMYCKCGNTND 491
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
A ++F + EP+ V+Y MIS Y G K+A +L + S G P+
Sbjct: 492 AYKIFSCIS----EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPN 538
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 186/503 (36%), Gaps = 128/503 (25%)
Query: 20 FLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFY 79
F D VA N++ + GK ++A+ + + + VK ++ ++++ GYC G ++DA
Sbjct: 174 FRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARS 229
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG-VEPNSTTHKMI---- 134
+F+ M + +++T+ + G + F M +G V+ NS T ++
Sbjct: 230 LFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 135 -----------IEGLCS--------------------VGKVGEAEAHFNRLQDKSVEIYS 163
I GL S +G +GEA+A F +++K ++
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 164 AMVNGYCEASNNNNNY-------GDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIA 216
+++ G + + Y G D G+ + K ELF + K +I
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT 405
Query: 217 --------------KEESCF--KLLTK-LC-----LVGDIGKAMKLLETMRSLNVEPSQI 254
+E C+ K+L K +C + L + + L + +
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 255 MYSIVLD---------ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLK 305
+IV D C G T A +F P++V+Y TMI+ Y K
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGYSYNGFGK 521
Query: 306 EALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVL 365
+AL LF ++ G +P+ +T+ LL + ++ W+ K + S ++
Sbjct: 522 KALKLFSMLESSGKEPNGVTFLALLSA----CVHVGYVDLGWKYFKSMKSSYNI------ 571
Query: 366 INGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
EP Y M+ L + GL+ +AS L+ M K
Sbjct: 572 -------------------------EPGPDHYACMVDLLGRSGLLDDASNLISTMPCK-- 604
Query: 426 TPSSHIISAVNRSILKARKVQFH 448
H S V S+L A K
Sbjct: 605 ---PH--SGVWGSLLSASKTHLR 622
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 155/424 (36%), Gaps = 84/424 (19%)
Query: 46 REELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCR 105
R L I + I + GNL +A +F +M N+ IV++ + +
Sbjct: 38 RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNR----SIVSWIAMISAYAE 93
Query: 106 NDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAM 165
N + A FDEM + +I+ C +GK E F + +K+ Y+ M
Sbjct: 94 NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYEL---FCDIPEKNAVSYATM 150
Query: 166 VNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLL 225
+ G+ A + D E FL + LL
Sbjct: 151 ITGFVRAG---------------------RFDEAE-----FLYAETPVKFRDSVASNVLL 184
Query: 226 TKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
+ G +A+++ + M V + S ++ C +G+ ARSLFD R
Sbjct: 185 SGYLRAGKWNEAVRVFQGMAVKEV----VSCSSMVHGYCKMGRIVDARSLFDRMTER--- 237
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG-IKPDVITYTVL--------------- 329
+V+T+T MI+ Y + ++ LF M++ G +K + T V+
Sbjct: 238 -NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQ 296
Query: 330 -------------------LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
L + + ++ MK D V ++ LI GL+
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLV 352
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
+ +A LFE M K D V++TDMI + KG + + EL M K +
Sbjct: 353 QRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTA 408
Query: 431 IISA 434
+ISA
Sbjct: 409 MISA 412
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 24/303 (7%)
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD-DKSPTP--------ISEVG 192
G + EAEA F ++ ++S+ + AM++ Y E + + D+ P I+ +
Sbjct: 64 GNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMI 123
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
K DL KAYELF ++ K + S ++T G +A + L + S
Sbjct: 124 KNKCDL-GKAYELFCDIPEKNAV----SYATMITGFVRAGRFDEA-EFLYAETPVKFRDS 177
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ +++L GK A +F +VV+ ++M++ YC+M + +A LF
Sbjct: 178 -VASNVLLSGYLRAGKWNEAVRVFQGMA----VKEVVSCSSMVHGYCKMGRIVDARSLFD 232
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M R +VIT+T ++ G FK D R ++ ++ ++ +V+
Sbjct: 233 RMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDF 288
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
Y + ++ + LE D ++S+Y K G M EA + M +K + +I
Sbjct: 289 VRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLI 348
Query: 433 SAV 435
+ +
Sbjct: 349 TGL 351
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 171/394 (43%), Gaps = 70/394 (17%)
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMII 135
++ +F+EM + D+ ++N + + ++ EA A+ F MES G EPNS + + I
Sbjct: 160 NSLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI 215
Query: 136 EGLCSVGKVGEAEAHFNRLQ--DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY 193
CS RL ++ EI+ V E N+ D Y
Sbjct: 216 SA-CS------------RLLWLERGKEIHRKCVKKGFELDEYVNSALVDM---------Y 253
Query: 194 CKVDLVEKAYELFLELSNK----------GDIAK--EESCFKLLTKLCLVGDIGKAMKLL 241
K D +E A E+F ++ K G +AK +SC ++L ++ + G L
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 242 ETM----RSLNVEPSQIMYSIVLDALCHV---------------GKTKHARSLFDSFVGR 282
+ RS N+ + ++ V+ ++ + G+ A ++F
Sbjct: 314 SILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT--- 370
Query: 283 GFTPDVV-TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD 341
DV ++ MI+SY + + +A++++ M G+KPDV+T+T +L + AAL+
Sbjct: 371 --QKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL-PACSQLAALE 427
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
I + ++ + D + S L++ K N ++A R+F + K D V++T MI
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMI 483
Query: 402 SLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
S Y G +EA DEM G+ P + AV
Sbjct: 484 SAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 169/454 (37%), Gaps = 104/454 (22%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G ++ F + SG + V+ + A +L ++ E+ + K +LD
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+ L+ Y D + E+ K + +V +N + G +++ + + M
Sbjct: 247 SALVDMY----GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 122 DGVEPNSTT---------------HKMIIEGL-------------CSV-------GKVGE 146
+G P+ TT H I G CS+ G+
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
AE F++ Q E ++ M++ Y N VE Y+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGN--------------------WFKAVE-VYDQM 401
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV 266
+ + K D+ S ++L + + GK + L ++ +E +++ S +LD
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAAL-EKGKQIHL--SISESRLETDELLLSALLDMYSKC 458
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G K A +F+S + DVV++T MI++Y +EAL F +M++ G+KPD +T
Sbjct: 459 GNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTL 514
Query: 327 TVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
+L + +A +D + ++ F M
Sbjct: 515 LAVL-SACGHAGLID-----------------------------------EGLKFFSQMR 538
Query: 387 DK-GLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
K G+EP Y+ MI + + G + EA E++ +
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
DV ++ T+I+ + + ++AL+LF M+ G +P+ ++ TV + + L+ I
Sbjct: 172 DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAI-SACSRLLWLERGKEI 230
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
R + LD S L++ K D E A +F+ M K L V + MI Y
Sbjct: 231 HRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVA 286
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
KG K E+L+ M +G PS ++++ + ++R +
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 123/304 (40%), Gaps = 65/304 (21%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K +L E + ++F E+ + D+A + + G+ KA++L M S EP+
Sbjct: 152 YAKFNLFENSLQVFDEMPER-DVASWNTVISCFYQ---SGEAEKALELFGRMESSGFEPN 207
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ ++ + A + + + + V +GF D + +++ Y + + L+ A ++FQ
Sbjct: 208 SVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQ 267
Query: 313 DMKRR-------------------------------GIKPDVITYTV----------LLY 331
M R+ G +P T T LL+
Sbjct: 268 KMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 332 GSF------KNAAALDV-INTIWRDM--KQTEISLDVVCYS-----------VLINGLMK 371
G F ++ D+ +N D+ K E +L +S V+I+ +
Sbjct: 328 GKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYIS 387
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
N+ A+ +++ M+ G++PD VT+T ++ + +++ ++ +S + +
Sbjct: 388 VGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELL 447
Query: 432 ISAV 435
+SA+
Sbjct: 448 LSAL 451
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 16/178 (8%)
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
ELF E+S +G + + L+ L GD A ++ + M S V P + Y+I+LD L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 264 CH---------VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
C GK + LF S +G P+VVTYTTMI+ +C+ +EA LF+ M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 315 KRRGIKPDVITYTVLLYGSFKN---AAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
K G PD TY L+ ++ AA+ ++I ++M+ + D Y ++ + L
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELI----KEMRSCRFAGDASTYGLVTDML 175
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
++LF++M +RG+ + +TYT L+ G F+ A D+ I+++M + D++ Y++L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQ-AGDCDMAQEIFKEMVSDGVPPDIMTYNILLD 59
Query: 368 GLMK---------TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
GL K ED LF + KG++P+ VTYT MIS + KKG +EA L
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 419 EMSSKGMTPSSHIISAVNRSILK 441
+M G P S + + R+ L+
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLR 142
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 275 LFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF 334
LF RG + VTYTT+I + A ++F++M G+ PD++TY +LL G
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 335 KN-----AAALDVINTIWR---DMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMI 386
KN A + W + + +VV Y+ +I+G K E+A LF M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 387 DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+ G PD TY +I + + G ++EL+ EM S
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCK---------LGKVDDAIEMREELRVKNIDLDIKHY 61
FKE G+ D + YNI+ D LCK GKV+D ++ L +K + ++ Y
Sbjct: 39 FKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTY 98
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TT+I G+C +G +A+ +F +MK G PD TYN L R+ + + EM S
Sbjct: 99 TTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Query: 122 DGVEPNSTTHKMIIEGL 138
+++T+ ++ + L
Sbjct: 159 CRFAGDASTYGLVTDML 175
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E + G+ + V Y + L + G D A E+ +E+ + DI Y L+ G C
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 71 QGNL---------IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
G L D + +F + KG KP++VTY + +G C+ A F +M+
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 122 DGVEPNSTTHKMIIE 136
DG P+S T+ +I
Sbjct: 124 DGPLPDSGTYNTLIR 138
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 12/189 (6%)
Query: 80 MFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
+F EM +G + VTY L G+ + + +A F EM SDGV P+ T+ ++++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 140 SVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
GK+ +A +++D S + G N Y T IS G+CK
Sbjct: 63 KNGKLEKALVA-GKVEDGWDLFCSLSLKG---VKPNVVTY-----TTMIS--GFCKKGFK 111
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
E+AY LF ++ G + + L+ GD + +L++ MRS Y +V
Sbjct: 112 EEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 171
Query: 260 LDALCHVGK 268
D L H G+
Sbjct: 172 TDML-HDGR 179
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 43 IEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAG 102
+E+ E+ + + + YTTLI+G G+ A +F EM + G PDI+TYN+L G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 103 VCRNDEARVAI---------NNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNR 153
+C+N + A+ + F + GV+PN T+ +I G C G EA F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 154 LQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKG 213
+++ S N A + + S I E+ C+ Y L ++ + G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKA--ASAELIKEMRSCRFAGDASTYGLVTDMLHDG 178
Query: 214 DIAK 217
+ K
Sbjct: 179 RLDK 182
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 179/409 (43%), Gaps = 55/409 (13%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
+++N + K G++D+A ++ + + +N+ +T L+KGY G + A +F +
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKVDVAESLFWK 135
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-ESDGVEPNSTTHKMIIEGLCSVG 142
M K + V++ V+ G ++ A ++ + + D + S H GLC G
Sbjct: 136 MPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIH-----GLCKEG 186
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKA 202
+V EA F+ + ++SV ++ MV GY NN DD A
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGY-----GQNNRVDD-------------------A 222
Query: 203 YELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDA 262
++F + K ++ S +L G I A +L E M V+P I + ++
Sbjct: 223 RKIFDVMPEKTEV----SWTSMLMGYVQNGRIEDAEELFEVM---PVKPV-IACNAMISG 274
Query: 263 LCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPD 322
L G+ AR +FDS R + ++ T+I + R EALDLF M+++G++P
Sbjct: 275 LGQKGEIAKARRVFDSMKER----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Query: 323 VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLF 382
T +L + A+L + + + + +DV SVL+ +K + +F
Sbjct: 331 FPTLISIL-SVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF 389
Query: 383 EDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ K D + + +IS Y GL +EA ++ EM G T + +
Sbjct: 390 DRFPSK----DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 109/223 (48%), Gaps = 23/223 (10%)
Query: 225 LTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+T L +G I +A KL ++ S ++ M + L + AR LFD R
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM----PRDARKLFDEMPDR-- 77
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+++++ +++ Y + + EA +F M R +V+++T L+ G N +DV
Sbjct: 78 --NIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGK-VDVAE 130
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+++ M + + V ++V++ G ++ +DA +L+E + DK D + T MI
Sbjct: 131 SLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGL 182
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAV--NRSILKARKV 445
K+G + EA E+ DEMS + + + +++ N + ARK+
Sbjct: 183 CKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKI 225
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 146/319 (45%), Gaps = 53/319 (16%)
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
T + I L +GK+ EA F+ KS+ +++MV GY
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYF------------------- 59
Query: 190 EVGYCKVDLVEK-AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLN 248
+L+ + A +LF E+ ++ I S L++ G+I +A K+ + M N
Sbjct: 60 ------ANLMPRDARKLFDEMPDRNII----SWNGLVSGYMKNGEIDEARKVFDLMPERN 109
Query: 249 VEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
V + ++ ++ H GK A SLF + + V++T M+ + + + +A
Sbjct: 110 V----VSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDAC 161
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLING 368
L++ + + D I T +++G K +D I+ +M + V+ ++ ++ G
Sbjct: 162 KLYEMIPDK----DNIARTSMIHGLCKE-GRVDEAREIFDEMSER----SVITWTTMVTG 212
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
+ + +DA ++F+ M +K +V++T M+ Y + G +++A EL + M K +
Sbjct: 213 YGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 429 SHIISAVNR--SILKARKV 445
+ +IS + + I KAR+V
Sbjct: 269 NAMISGLGQKGEIAKARRV 287
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 161/367 (43%), Gaps = 38/367 (10%)
Query: 10 KFKEFKES----------GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIK 59
K K FKE G LD + + + G+++DA ++ + K+ D+
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD----KSPHRDVV 201
Query: 60 HYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM 119
YT LIKGY +G + +A +F+E+ K D+V++N + +G + A+ F +M
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGYCEASNN 175
V P+ +T ++ G + + D +++I +A+++ Y +
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 176 NNNYGDDKSPTPISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTK 227
G + P +V GY ++L ++A LF E+ G+ + + +L
Sbjct: 318 ETACGLFER-LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 228 LCLVG--DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFT 285
+G DIG+ + + R V + + + ++D G + A +F+S + + +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINT 345
++ MI + + DLF M++ GI+PD IT+ LL + ++ LD+
Sbjct: 437 ----SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL-SACSHSGMLDLGRH 491
Query: 346 IWRDMKQ 352
I+R M Q
Sbjct: 492 IFRTMTQ 498
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 160/380 (42%), Gaps = 26/380 (6%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ T+ +G+ L + + A ++ M + G P+ T+ + ++ + +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS--NNNNN 178
G + + H +I G++ +A F++ + V Y+A++ GY N
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 179 YGDDKSPTPISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
D+ P+ +V GY + ++A ELF ++ K ++ +ES + C
Sbjct: 222 LFDE---IPVKDVVSWNAMISGYAETGNYKEALELFKDMM-KTNVRPDESTMVTVVSACA 277
Query: 231 -VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
G I ++ + + + + ++D G+ + A LF+ + DV+
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVI 333
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI--W 347
++ T+I Y MN KEAL LFQ+M R G P+ +T +L + + A+D+ I +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL-PACAHLGAIDIGRWIHVY 392
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
D + ++ + LI+ K + E A ++F ++ K L ++ MI +
Sbjct: 393 IDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS----SWNAMIFGFAMH 448
Query: 408 GLMKEASELLDEMSSKGMTP 427
G + +L M G+ P
Sbjct: 449 GRADASFDLFSRMRKIGIQP 468
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
L D A+KL M SL + P+ + VL + K + + + G D+
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLY 170
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
+T++I+ Y + L++A +F R DV++YT L+ K A+ I +
Sbjct: 171 VHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALI----KGYASRGYIENAQKL 222
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
+ + DVV ++ +I+G +T NY++A+ LF+DM+ + PD+ T ++S + G
Sbjct: 223 FDEIPVK-DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 410 MKEASELLDEMSSKGMTPSSHIISAV 435
++ ++ + G + I++A+
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNAL 307
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
+ Y+ ++ G ++A+ LFD + DVV++ MI+ Y + KEAL+LF+D
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKD 256
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAA-ALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M + ++PD T ++ ++ + L +W D +L +V + LI+ K
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIV--NALIDLYSKC 314
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
E A LFE + K D +++ +I Y L KEA L EM G TP+
Sbjct: 315 GELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 151/378 (39%), Gaps = 46/378 (12%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVT--YNVLAAGVCRNDEARVAINNFDE 118
+ ++I+GY N A + EM KG+ PD T Y + A R+ + ++ F
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF-- 132
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN 178
+ G E N ++ G+V F + +V + ++++G+ NNN
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFV----NNNR 188
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
+ D A E F E+ + G A E LL DI
Sbjct: 189 FSD--------------------AIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 239 KLLETMRSLNVEP---SQIMYSIVL-----DALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
++ L +P S++ ++++L D G + AR LFD R +V+
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER----TLVS 284
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ ++I Y + +EAL +F DM GI PD +T+ ++ S + + +I +
Sbjct: 285 WNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCS-QLGQSIHAYV 343
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+T D L+N KT + E A + FED+ K D + +T +I G
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK----DTIAWTVVIIGLASHGHG 399
Query: 411 KEASELLDEMSSKG-MTP 427
EA + M KG TP
Sbjct: 400 NEALSIFQRMQEKGNATP 417
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 197/481 (40%), Gaps = 47/481 (9%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGV----------AYNIVFDALCKLGKVDDAIEMREELR 50
+G+ D + ++F+E+ LD + AYNI AL K G +++ + +++
Sbjct: 289 LGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 51 -VKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEA 109
++ +L++ Y +++ + NL + + EM +G P+ T N C+
Sbjct: 349 PLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 110 RVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEA----EAHFNRLQDKSVEIYSAM 165
A+ + G P + ++ +I LC+ V +A + +R + +S +
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTL 468
Query: 166 VNGYCEASNNN-------NNYGDDKSPTPISEV----GYCKVDLVEKAYELFLELSNKGD 214
N C + D P I+ C V VE A + EL NK
Sbjct: 469 TNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDAL-MINELFNKSG 527
Query: 215 IAKEESCFKLLTKL------CLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHV-- 266
+ ++ FK+ T L + GDI A KL+ M+ P++ +Y V+ +C +
Sbjct: 528 V---DTSFKMFTSLIYGSITLMRGDI--AAKLIIRMQEKGYTPTRSLYRNVIQCVCEMES 582
Query: 267 GKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITY 326
G+ +L F + V Y I K A ++ M R GI P V +
Sbjct: 583 GEKNFFTTLL-KFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASN 641
Query: 327 TVLLYGSFKNAAALDVINTI--WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
++L KN D ++ R+ +T+ L Y V+I GL K + +DA+ E+
Sbjct: 642 ILMLQSYLKNEKIADALHFFHDLREQGKTKKRL----YQVMIVGLCKANKLDDAMHFLEE 697
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
M +GL+P Y I + EA L++E G ++ I + + + +K++
Sbjct: 698 MKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKG 757
Query: 445 V 445
V
Sbjct: 758 V 758
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 169/443 (38%), Gaps = 38/443 (8%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYT--TLIK 66
D K + G FL G ++ + +ALC GK D A E+ + DL K +I
Sbjct: 448 DVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAREL--VIAAAERDLLPKRIAGCKIIS 505
Query: 67 GYCLQGNLIDAFYMFNEMKNK-GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVE 125
C G + DA M NE+ NK G + L G +A M+ G
Sbjct: 506 ALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYT 564
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
P + ++ +I+ +C + + GE + F L + ++ V Y N +
Sbjct: 565 PTRSLYRNVIQCVCEM-ESGE-KNFFTTLLKFQLSLWEHKVQAY-------NLF------ 609
Query: 186 TPISEVGYC-KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
I G+ K L Y++ + G S +L I A+ +
Sbjct: 610 --IEGAGFAGKPKLARLVYDM---MDRDGITPTVASNILMLQSYLKNEKIADALHFFHDL 664
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
R + + +Y +++ LC K A + G G P + Y I C
Sbjct: 665 REQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKY 723
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISL-DVVCYS 363
EA+ L + ++ G + VLL+ + K+ + W M+ E + ++
Sbjct: 724 DEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEA----WTRMRNIEDKIPEMKSLG 779
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK 423
LI + E ++ +++I+K D TY ++ + ++A E+++ ++ +
Sbjct: 780 ELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQ-AEDAYEMVERIARR 838
Query: 424 GMTPSSH---IISAVNRSILKAR 443
G P+ I+ NR IL+ R
Sbjct: 839 GYVPNERTDMILERANR-ILEER 860
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 157/402 (39%), Gaps = 44/402 (10%)
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
L+ GY + G A F M+ +G D Y+VL + FD++
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD- 181
G + TH ++++ C GK+ EAE + L + + +A + + +
Sbjct: 247 GF-VCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLE-------LSNKGD----IAKEESC--------- 221
K I VG +D +AY +++ L+N D I+ E C
Sbjct: 306 TKLLDEIKLVGTVNMD---RAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNS 362
Query: 222 --FKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
F+LL + L G +L M V P++ + L C G A L+ S
Sbjct: 363 MVFQLLKENNLDG----VYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSR 418
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYT----VLLYGSFK 335
GF P ++Y +I++ C S+++A D+ + RG T++ L +
Sbjct: 419 SEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKP 478
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKV 395
+ A VI RD+ I+ +I+ L EDA+ + E G++
Sbjct: 479 DMARELVIAAAERDLLPKRIA-----GCKIISALCDVGKVEDALMINELFNKSGVDTSFK 533
Query: 396 TYTDMISLYYKKGLMKE--ASELLDEMSSKGMTPSSHIISAV 435
+T +I Y LM+ A++L+ M KG TP+ + V
Sbjct: 534 MFTSLI--YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNV 573
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 176/414 (42%), Gaps = 65/414 (15%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLD--IKHYTTLIKGYCLQGN 73
++G+ + + YN++F A + K + A+E +L + N L+ I + L+KG N
Sbjct: 158 QAGIAPNIITYNLIFQAYLDVRKPEIALE-HYKLFIDNAPLNPSIATFRILVKGLVSNDN 216
Query: 74 LIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD--GVEPNSTTH 131
L A + +M KGF D V Y+ L G +N +A + + E++ G + +
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
+++G ++ +++E Y EA N+
Sbjct: 277 GQLMKGY-----------FMKEMEKEAMECYE-------EAVGENS-------------- 304
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
KV + AY LE L G +A+KL + ++ + P
Sbjct: 305 ---KVRMSAMAYNYVLE------------------ALSENGKFDEALKLFDAVKKEHNPP 343
Query: 252 SQI-----MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+ ++++++ C GK + A +F +PD +++ ++N C L E
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 307 ALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLI 366
A L+ +M+ + +KPD TY +L+ FK +D ++ M ++ + ++ Y+ L
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKE-GKIDEGAAYYKTMVESNLRPNLAVYNRLQ 462
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
+ L+K +DA F+ M+ K L+ D Y ++ + G + E +++DEM
Sbjct: 463 DQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEM 515
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 150/383 (39%), Gaps = 65/383 (16%)
Query: 90 KPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEA 149
+P I T N + A R + + + G+ PN T+ +I + V K A
Sbjct: 127 RPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALE 186
Query: 150 HF-----NRLQDKSVEIYSAMVNGYCEASNNN-------------NNYGDDKSPTPISEV 191
H+ N + S+ + +V G SN+N + D +
Sbjct: 187 HYKLFIDNAPLNPSIATFRILVKGLV--SNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM 244
Query: 192 GYCKVDLVEKAYELFLELSNK-GDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLN- 248
G K + +L+ EL K G + + L K + ++ K AM+ E N
Sbjct: 245 GCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENS 304
Query: 249 -VEPSQIMYSIVLDALCHVGKTKHARSLFDSF-----VGRGFTPDVVTYTTMINSYCRMN 302
V S + Y+ VL+AL GK A LFD+ R ++ T+ M+N YC
Sbjct: 305 KVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGG 364
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCY 362
+EA+++F+ M G FK S D + +
Sbjct: 365 KFEEAMEVFRQM-----------------GDFK-------------------CSPDTLSF 388
Query: 363 SVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+ L+N L + +A +L+ +M +K ++PD+ TY ++ +K+G + E + M
Sbjct: 389 NNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE 448
Query: 423 KGMTPSSHIISAVNRSILKARKV 445
+ P+ + + + ++KA K+
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKL 471
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 171/411 (41%), Gaps = 66/411 (16%)
Query: 59 KHY---TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINN 115
KH+ T LI Y +G + +A +F+EM ++ D+V + + G ++ A
Sbjct: 43 KHHILATNLIVSYFEKGLVEEARSLFDEMPDR----DVVAWTAMITGYASSNYNARAWEC 98
Query: 116 FDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYC-EASN 174
F EM G PN T L SV K ++ V Y A+V+G +
Sbjct: 99 FHEMVKQGTSPNEFT-------LSSVLK---------SCRNMKVLAYGALVHGVVVKLGM 142
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
+ Y D+ ++ C V + E A +F ++ K D+ + L+T +GD
Sbjct: 143 EGSLYVDNAM---MNMYATCSVTM-EAACLIFRDIKVKNDV----TWTTLITGFTHLGDG 194
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+K+ + M N E + +I + A + + + S + RGF ++ ++
Sbjct: 195 IGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSI 254
Query: 295 INSYCRMNSL------------------------------KEALDLFQDMKRRGIKPDVI 324
++ YCR L EAL +FQ + +G P+
Sbjct: 255 LDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCY 314
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
T+T L+ + N AAL+ + + + + +V + LI+ K N D+ R+F +
Sbjct: 315 TFTSLV-AACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
++D+ + V++T M+ Y G EA EL D+M S G+ P + AV
Sbjct: 374 IVDR---RNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + D K G + D+ + E+ + ++ +T+++ GY G +A +F++M +
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRR---NLVSWTSMMIGYGSHGYGAEAVELFDKMVS 408
Query: 87 KGFKPD-IVTYNVLAAGVCRNDE-ARVAINNFDEMESD-GVEPNSTTHKMIIEGLCSVGK 143
G +PD IV VL+A CR+ + F+ MES+ G+ P+ + +++ L GK
Sbjct: 409 SGIRPDRIVFMAVLSA--CRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN 176
+GEA R+ K E + G C+A +N
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHN 499
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 46/313 (14%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + D C+ G + +A E+ D D+ + TLI + + +A MF ++
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEME----DKDLITWNTLISEL-ERSDSSEALLMFQRFES 306
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES----DGVEPNSTTHKMIIEGLCSVG 142
+GF P+ T+ L A C N A+N ++ G N +I+ G
Sbjct: 307 QGFVPNCYTFTSLVAA-CANI---AALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 143 KVGEAEAHFNRLQD-KSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
+ +++ F + D +++ +++M+ GY ++ YG +
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGY-----GSHGYGAE------------------- 398
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCL-VGDIGKAMKLLETMRS-LNVEPSQIMYSIV 259
A ELF ++ + G I + F + C G + K +K M S + P + +Y+ V
Sbjct: 399 AVELFDKMVSSG-IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+D L GK A L + F PD T+ ++ + C+ + + K +
Sbjct: 458 VDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGA-CKAHKHNGLISRLAARKVMEL 513
Query: 320 KPDVI-TYTVLLY 331
KP ++ TY +L Y
Sbjct: 514 KPKMVGTYVMLSY 526
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 160/398 (40%), Gaps = 109/398 (27%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNK--------------------------------- 87
+ ++I GY ++A +FNEM+N+
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACK 346
Query: 88 -GFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES-DGVEPNSTTHKMIIEGLCSVGKVG 145
G DIV + L + A F E+ES D + NS +I+ S G++
Sbjct: 347 FGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNS-----MIKVYFSCGRID 401
Query: 146 EAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
+A+ F R+++KS+ +++M NG+ S N C V+ +E +++
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGF---SQNG-----------------CTVETLEYFHQM 441
Query: 206 FLELSNKGDIAKEESCFKLLTKLCL-VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
+K D+ +E + C + + ++ + ++ Q++ S ++D C
Sbjct: 442 -----HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYC 496
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
G +H R +FD+ V D V + +MI+ Y EA+DLF+ M GI+P I
Sbjct: 497 KCGFVEHGRRVFDTMV----KSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQI 552
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC-YSVLINGLMKTDNYEDAIRLFE 383
T+ V+L C Y L+ E+ +LFE
Sbjct: 553 TFMVVL----------------------------TACNYCGLV---------EEGRKLFE 575
Query: 384 DM-IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
M +D G PDK ++ M+ L + G ++EA L++EM
Sbjct: 576 SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/427 (20%), Positives = 173/427 (40%), Gaps = 38/427 (8%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
DG ++N+V K G++ A + + K D+ +L+ GY L G +A +F
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEK----DVVTLNSLLHGYILNGYAEEALRLF 178
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
E+ F D +T + + + ++ GVE +S + ++
Sbjct: 179 KELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC 235
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG--DDKSPTPI----SEV-GYC 194
G + A ++++ SA+++GY N + G D KS + S + GY
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQ- 253
++ +A LF E+ N+ +E+S L V + + LET + ++ +
Sbjct: 296 ANNMKMEALVLFNEMRNE---TREDS-----RTLAAVINACIGLGFLETGKQMHCHACKF 347
Query: 254 ------IMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEA 307
++ S +LD G A LF + D + +MI Y + +A
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVE----SYDTILLNSMIKVYFSCGRIDDA 403
Query: 308 LDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLIN 367
+F+ ++ + + I++ + G +N ++ + + M + ++ D V S +I+
Sbjct: 404 KRVFERIENKSL----ISWNSMTNGFSQNGCTVETLE-YFHQMHKLDLPTDEVSLSSVIS 458
Query: 368 GLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ E ++F GL+ D+V + +I LY K G ++ + D M P
Sbjct: 459 ACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVP 518
Query: 428 SSHIISA 434
+ +IS
Sbjct: 519 WNSMISG 525
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 164/396 (41%), Gaps = 33/396 (8%)
Query: 64 LIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-ESD 122
L++ Y G + A +F+EM ++ + ++N + G + E ++ FD M E D
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNY----FSWNTMIEGYMNSGEKGTSLRFFDMMPERD 123
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE-----IYSAMVNGYCEAS---N 174
G N +++ G G++ A FN + +K V ++ ++NGY E +
Sbjct: 124 GYSWN-----VVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF 178
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
N+ D +++ ++ ++ ++ G + L+ GD+
Sbjct: 179 KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDL 238
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
A +LE +R EP S ++ + G+ +R LFD R V+ + +M
Sbjct: 239 RMASYMLEQIR----EPDDHSLSALISGYANCGRVNESRGLFD----RKSNRCVILWNSM 290
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
I+ Y N EAL LF +M R + D T ++ L+ + +
Sbjct: 291 ISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACI-GLGFLETGKQMHCHACKFG 348
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
+ D+V S L++ K + +A +LF ++ D + MI +Y+ G + +A
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY----DTILLNSMIKVYFSCGRIDDAK 404
Query: 415 ELLDEMSSKGMTPSSHIISAVNRSILKARKVQ-FHE 449
+ + + +K + + + + +++ ++ FH+
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQ 440
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 155/391 (39%), Gaps = 63/391 (16%)
Query: 56 LDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINN 115
L+++ LI + G AF +F++ + GF P+ TY + +C+ A +
Sbjct: 229 LNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV 288
Query: 116 FDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNN 175
++M GV II C GK EA + + + K + V A
Sbjct: 289 CEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITA--- 345
Query: 176 NNNYGDDKSPTPISEVGYCKVD-LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
CK D + A E+ +LS + + ++ LC + ++
Sbjct: 346 -----------------LCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNV 388
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
A LL M S P ++++V+ A G A+ + RG PDV TYT +
Sbjct: 389 KDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
I+ Y + + EA ++ + K++ K +T
Sbjct: 449 ISGYAKGGMMDEAQEILAEAKKKHKKLSPVT----------------------------- 479
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
Y LI G K + Y++A++L +M G++P+ Y +I + K L E +
Sbjct: 480 -------YHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKA 532
Query: 415 ELL-DEMSSKGMTPSSHIISAVNRSILKARK 444
E+L +EM KG+ ++A+++ +++A K
Sbjct: 533 EVLFEEMKQKGLH-----LNAISQGLIRAVK 558
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Query: 26 YNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
+N+V A K G +D+A E+ + + + + D+ YT +I GY G + +A + E K
Sbjct: 410 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAK 469
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
K K VTY+ L G C+ +E A+ +EM+ GV+PN+ + +I+ C
Sbjct: 470 KKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDW 529
Query: 146 E-AEAHFNRLQDKSVEIYSAMVNGYCEA 172
E AE F ++ K + + +A+ G A
Sbjct: 530 EKAEVLFEEMKQKGLHL-NAISQGLIRA 556
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 12/224 (5%)
Query: 214 DIAKEESC----FKLLTKL-CLVGDIGK---AMKLLETMRSLNVEPSQIMYSIVLDALCH 265
+I ++ESC ++L +L L G +GK A + P+ Y + L+ALC
Sbjct: 219 EIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCK 278
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ--DMKRRGIKPDV 323
A S+ + + G + +I +C+ +EA +++ K + + P
Sbjct: 279 RSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF 338
Query: 324 ITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFE 383
+ L+ KN + + D+ + +S +I+ L + N +DA L
Sbjct: 339 VA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLL 396
Query: 384 DMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
DMI KG P + ++ K G + EA E+L M S+G+ P
Sbjct: 397 DMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKP 440
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 106/261 (40%), Gaps = 17/261 (6%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ-GNL 74
+SG+ +G + CK GK ++A + E + K L + TLI C G +
Sbjct: 294 KSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTI 353
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
A M ++ + + I ++ + +CR + A +M S G P + ++
Sbjct: 354 TFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLV 413
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNY-------GDDK 183
+ G + EA+ ++ + ++ Y+ +++GY + + K
Sbjct: 414 VHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHK 473
Query: 184 SPTPISE----VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG-DIGKAM 238
+P++ GYCK++ ++A +L E+ G + KL+ CL D KA
Sbjct: 474 KLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAE 533
Query: 239 KLLETMRSLNVEPSQIMYSIV 259
L E M+ + + I ++
Sbjct: 534 VLFEEMKQKGLHLNAISQGLI 554
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
K + G+ D Y ++ K G +D+A E+ E + K+ L Y LI+GYC
Sbjct: 430 LKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCK 489
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRN----DEARVAINNFDEMESDGVEP 126
+A + NEM G +P+ YN L C ++A V F+EM+ G+
Sbjct: 490 IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVL---FEEMKQKGLHL 546
Query: 127 NSTTHKMI 134
N+ + +I
Sbjct: 547 NAISQGLI 554
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 190/423 (44%), Gaps = 32/423 (7%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF--NEM 84
N++ L K G+VD+A +M +++ + D + T+I Y L DA +F N +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPV 87
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
KN +++N L +G C++ A N F EM+SDG++PN T ++ S+ +
Sbjct: 88 KN------TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLL 141
Query: 145 GEAEA-HFNRLQ---DKSVEIYSAMVNGYCEASN-NNNNY------GDDKSPTPISEV-G 192
E H + ++ D V + + ++ Y + + Y G+ + T S + G
Sbjct: 142 LRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTG 201
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y + KA E F +L +G+ + + + +LT V +++ + + +
Sbjct: 202 YSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
+ S ++D + + AR+L + DVV++ +MI R + EAL +F
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGME----VDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M R +K D T +L + + + ++ + +T + + + L++ K
Sbjct: 318 RMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKR 377
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+ A+++FE MI+K D +++T +++ G EA +L M G+TP +
Sbjct: 378 GIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVT 433
Query: 433 SAV 435
++V
Sbjct: 434 ASV 436
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 190/451 (42%), Gaps = 75/451 (16%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
+SG L+ + N + D CK + A ++ + + +N+ ++ L+ G+ L G+L
Sbjct: 34 KSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV----VSWSALMSGHVLNGDLK 89
Query: 76 DAFYMFNEMKNKGFKPDIVTY--NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
+ +F+EM +G P+ T+ N+ A G+ E + I+ F G E
Sbjct: 90 GSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF--CLKIGFEMMVEVGNS 147
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGY 193
+++ G++ EAE F R+ D+S+ ++AM+ G+ A YG
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA-----GYGS------------ 190
Query: 194 CKVDLVEKAYELF--LELSNKGDIAKEESCFKLLTKLCLVGDI--GKAMKLLETMRSLNV 249
KA + F ++ +N + E + LL G I GK + +
Sbjct: 191 -------KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
S + ++D G AR FD + +++++++I Y + EA+
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEK----TMISWSSLILGYAQEGEFVEAMG 299
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAAL-------------------DVINTIWRDM 350
LF+ ++ + D + ++ G F + A L V+N++ DM
Sbjct: 300 LFKRLQELNSQIDSFALSSII-GVFADFALLRQGKQMQALAVKLPSGLETSVLNSV-VDM 357
Query: 351 KQ------------TEISL-DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTY 397
E+ L DV+ ++V+I G K + ++R+F +M+ +EPD+V Y
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 398 TDMISLYYKKGLMKEASELLDE-MSSKGMTP 427
++S G++KE EL + + + G+ P
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K LV++A + F E+ K I S ++T G K++++ M N+EP
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVI----SWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFV-GRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
++ Y VL A H G K LF + G P V Y +++ R LKEA L
Sbjct: 414 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 473
Query: 312 QDMKRRGIKPDVITYTVLL 330
M IKP+V + LL
Sbjct: 474 DTMP---IKPNVGIWQTLL 489
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 168/408 (41%), Gaps = 61/408 (14%)
Query: 32 ALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKP 91
A+C G D +M L ++ I+ + ++I + G L A + +M G P
Sbjct: 81 AMC--GSFSDCGKMFYRLDLRRSS--IRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 92 DIVTYNVLAAGVCRNDEARVAINNF-------DEMESDGVEPNSTTHKMIIEGLCSVGKV 144
D+ T+ L +A VA+ NF D + S G++ N +I+ GK+
Sbjct: 137 DVSTFPCLV-------KACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
F+R+ K I++ M+NGY + +D V K +
Sbjct: 190 DVPSKLFDRVLQKDCVIWNVMLNGYAKCG---------------------ALDSVIKGFS 228
Query: 205 LFLELSNKGDIAKEESCFKLLTKLC---LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
+ I+ F + +C L+ D+G + L + ++ E S + + +L
Sbjct: 229 VM----RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS--IKNSLLS 282
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
G+ A LF + R D VT+ MI+ Y + ++E+L F +M G+ P
Sbjct: 283 MYSKCGRFDDASKLF-RMMSRA---DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 338
Query: 322 DVITYTVLL--YGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
D IT++ LL F+N L+ I + + ISLD+ S LI+ K +
Sbjct: 339 DAITFSSLLPSVSKFEN---LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC----RGV 391
Query: 380 RLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
+ +++ + D V +T MIS Y GL ++ E+ + ++P
Sbjct: 392 SMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISP 439
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 181/457 (39%), Gaps = 71/457 (15%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
SG+ +G N + K G+ DDA ++ + D + +I GY G + +
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEE 323
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCR--NDEARVAINNFDEMESDGVEPNSTTHKMI 134
+ F EM + G PD +T++ L V + N E I+ + S ++ T+ +
Sbjct: 324 SLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS--AL 381
Query: 135 IEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK----------- 183
I+ V A+ F++ V +++AM++GY +N Y D
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL----HNGLYIDSLEMFRWLVKVKI 437
Query: 184 SPTPISEVG---------------------------------------YCKVDLVEKAYE 204
SP I+ V Y K + AYE
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
+F LS K DI S ++T+ + A+ + M + + S L A
Sbjct: 498 IFERLS-KRDIVSWNS---MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
++ +++ + DV + +T+I+ Y + +LK A+++F+ MK + +++
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK----NIV 609
Query: 325 TYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
++ ++ + D + ++++ I D + + +I+ + ++ +R F
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRS 669
Query: 385 MI-DKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
M D G++P + Y ++ L+ + G + EA E + M
Sbjct: 670 MTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM 706
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 11/251 (4%)
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL-ETMRSLNVEPSQIMY 256
L+ +A + ++ G ++ + S F L K C+ K + L +T+ SL ++ ++ +
Sbjct: 118 LLNQALAFYFKMLCFG-VSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVA 176
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
S ++ A GK LFD R D V + M+N Y + +L + F M+
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFD----RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRM 232
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
I P+ +T+ +L + +D+ + + + + + + L++ K ++
Sbjct: 233 DQISPNAVTFDCVL-SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
DA +LF M D VT+ MIS Y + GLM+E+ EM S G+ P + S++
Sbjct: 292 DASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347
Query: 437 RSILKARKVQF 447
S+ K +++
Sbjct: 348 PSVSKFENLEY 358
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 151/367 (41%), Gaps = 67/367 (18%)
Query: 54 IDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAI 113
+D D +L+ Y G L AF +F E ++ K I+ +NVL G CR + +A
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 114 NNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
F M E NS + +I+G G++ A+ F + +K+V ++ ++NG+ +
Sbjct: 217 TLFRSMP----ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQT- 271
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
GD E A + E+ KG E + +L+ G
Sbjct: 272 ------GD-----------------YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGA 308
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+G +++ + ++ + + + ++D G+ A ++F + + D++++T
Sbjct: 309 LGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTA 364
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT 353
MI + +A+ F+ M G KPD + + +L N++ +D+
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL-NSSEVDL----------- 412
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
GL N+ D++RL D +EP Y ++ L + G + EA
Sbjct: 413 --------------GL----NFFDSMRL-----DYAIEPTLKHYVLVVDLLGRAGKLNEA 449
Query: 414 SELLDEM 420
EL++ M
Sbjct: 450 HELVENM 456
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 132/321 (41%), Gaps = 28/321 (8%)
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVG--KVGEA--EAHFN 152
N L G+ N ++ +F M GV+P+ T +++ +G +G A A
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 153 RLQDKSVEIYSAMVNGYCEASNNNNNYGD-DKSPTPISEV----------GYCKVDLVEK 201
D + ++V+ Y + + + ++SP I + GYC+ +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A LF + + S L+ G++ +A +L E M NV + ++ +++
Sbjct: 215 ATTLFRSMPERNS----GSWSTLIKGYVDSGELNRAKQLFELMPEKNV----VSWTTLIN 266
Query: 262 ALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
G + A S + + +G P+ T ++++ + +L + + + GIK
Sbjct: 267 GFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKL 326
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
D T L+ + LD T++ +M D++ ++ +I G + AI+
Sbjct: 327 DRAIGTALV-DMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFHQAIQC 381
Query: 382 FEDMIDKGLEPDKVTYTDMIS 402
F M+ G +PD+V + +++
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLT 402
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
++G+ LD + D K G++D A + + K DI +T +I+G+ + G
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK----DILSWTAMIQGWAVHGRFH 376
Query: 76 DAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD-GVEPNSTTHKMI 134
A F +M G KPD V + + + E + +N FD M D +EP + ++
Sbjct: 377 QAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV 436
Query: 135 IEGLCSVGKVGEAE 148
++ L GK+ EA
Sbjct: 437 VDLLGRAGKLNEAH 450
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/445 (20%), Positives = 188/445 (42%), Gaps = 27/445 (6%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
+GM LD + + + CK+G IE E + + + D+ + +I GY QG + D
Sbjct: 303 NGMELDNILGTSLLNFYCKVG----LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
A YM M+ + K D VT L + R + ++ E + +++
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMD 418
Query: 137 GLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNN----YGDDKSPTPISEVG 192
G + +A+ F+ +K + +++ ++ Y E+ + YG P + +
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVIT 478
Query: 193 YCKVDL-------VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR 245
+ + L V++A ++FL++ + G I S ++ + G +A+ L M+
Sbjct: 479 WNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ 538
Query: 246 SLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY-TTMINSYCRMNSL 304
+ P+ ++ L A H+ R++ + +V+ T++++ Y + +
Sbjct: 539 ESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDI 598
Query: 305 KEALDLFQDMKRRGIK-PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYS 363
+A +F + + + LYG+ K A AL +R ++ + D + +
Sbjct: 599 NKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL------YRSLEGVGLKPDNITIT 652
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEMSS 422
+++ + AI +F D++ K ++P Y M+ L G ++A L++EM
Sbjct: 653 NVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF 712
Query: 423 KGMTPSSHIISAVNRSILKARKVQF 447
K P + +I ++ S K RK +
Sbjct: 713 K---PDARMIQSLVASCNKQRKTEL 734
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 9/255 (3%)
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y K +++ A ++F E+ ++ +A L+ G +A++L MR VEP+
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWN----ALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 253 QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQ 312
++ S L A ++G + + + G D + T+++N YC++ ++ A +F
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 313 DMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKT 372
M + DV+T+ +++ G + D I + + M+ ++ D V + L++ +T
Sbjct: 334 RM----FEKDVVTWNLIISGYVQQGLVEDAI-YMCQLMRLEKLKYDCVTLATLMSAAART 388
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHII 432
+N + + I E D V + ++ +Y K G + +A ++ D K + + ++
Sbjct: 389 ENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448
Query: 433 SAVNRSILKARKVQF 447
+A S L ++
Sbjct: 449 AAYAESGLSGEALRL 463
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 159/399 (39%), Gaps = 80/399 (20%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ + + F + G+ + + +N++ +L + G+VD+A +M +++ I ++ +
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
TT++ G G +A +M+ G +P+ + V A C A +A
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV-ALSAC----AHLA--------- 560
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKS-VEIYSAMVNGYCEASNNNNNYG 180
+ T H II LQ S V I +++V+ Y + G
Sbjct: 561 -SLHIGRTIHGYIIR----------------NLQHSSLVSIETSLVDMYAKC-------G 596
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELF-------LELSNKGDIAKEESCFKLLTKLCLVGD 233
D + KA ++F L LSN +++ L G+
Sbjct: 597 D-----------------INKAEKVFGSKLYSELPLSN-----------AMISAYALYGN 628
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG-RGFTPDVVTYT 292
+ +A+ L ++ + ++P I + VL A H G A +F V R P + Y
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
M++ ++AL L ++M KPD L+ S ++++ + R + +
Sbjct: 689 LMVDLLASAGETEKALRLIEEMP---FKPDARMIQSLV-ASCNKQRKTELVDYLSRKLLE 744
Query: 353 TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLE 391
+E + Y + N ++++ +++ E M KGL+
Sbjct: 745 SEPE-NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLK 782
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G+ +D NI+ LC+ G ++ A+++ +E + ++ ++ LI+G+C +G +A
Sbjct: 197 GVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEA 256
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
F + M+ + +PD +T+N+L +G+ + I+ + M+ G EPN T++ ++ G
Sbjct: 257 FKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYG 316
Query: 138 LCSVGKVGEAEAHFNRL----QDKSVEIYSAMVNGYCEASN 174
L + EA+ +++ S Y MV G CE +
Sbjct: 317 LLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKS 357
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 36/230 (15%)
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
+ +A E+ + + G +S +L L + K+ + L VE +I
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
++ LC G + A L D F + P+V+T++ +I +C +EA L + M++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
I+PD IT +++LI+GL K E+
Sbjct: 268 IEPDTIT------------------------------------FNILISGLRKKGRVEEG 291
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
I L E M KG EP+ TY +++ K EA E++ +M S GM PS
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 36/215 (16%)
Query: 230 LVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVV 289
L G I +A+++L M PS ++ +L+ L +F S G D
Sbjct: 144 LAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDAC 203
Query: 290 TYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD 349
+I C +L+ AL L + ++ +P+V+T+
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTF----------------------- 240
Query: 350 MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGL 409
S LI G +E+A +L E M + +EPD +T+ +IS KKG
Sbjct: 241 -------------SPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 410 MKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
++E +LL+ M KG P+ V +L ++
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKR 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%)
Query: 18 GMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDA 77
G + ++N + + L D+ ++ +++D LIKG C GNL A
Sbjct: 162 GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAA 221
Query: 78 FYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEG 137
+ +E + +P+++T++ L G C + A + ME + +EP++ T ++I G
Sbjct: 222 LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISG 281
Query: 138 LCSVGKVGEAEAHFNRLQDKSVE 160
L G+V E R++ K E
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCE 304
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 88/241 (36%), Gaps = 34/241 (14%)
Query: 96 YNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQ 155
Y LA + R E + +F G P+S + I+ L S E F
Sbjct: 141 YGNLAGRINRAIEILFGMPDF------GCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP 194
Query: 156 DKSVEI----YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSN 211
VEI + ++ G CE+ N +E A +L E
Sbjct: 195 KLGVEIDACCLNILIKGLCESGN------------------------LEAALQLLDEFPQ 230
Query: 212 KGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKH 271
+ + L+ C G +A KLLE M +EP I ++I++ L G+ +
Sbjct: 231 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 272 ARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY 331
L + +G P+ TY ++ EA ++ M G++P ++Y ++
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVL 350
Query: 332 G 332
G
Sbjct: 351 G 351
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 282 RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALD 341
R PD VTYTT+++++ + A + +M R G+ + ITY VLL G K +D
Sbjct: 446 RNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQ-ID 504
Query: 342 VINTIWRDMKQ-TEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDM 400
+ R+M + I DVV Y+++I+G + D+ A+ F +M +G+ P K++YT +
Sbjct: 505 RAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTL 564
Query: 401 ISLYYKKGLMKEASELLDEM 420
+ + G K A+ + DEM
Sbjct: 565 MKAFAMSGQPKLANRVFDEM 584
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEM-REELRVKNIDLDIKHYTTLIKGYC 69
E G+ + + YN++ CK ++D A ++ RE I+ D+ Y +I G
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG-VEPNS 128
L + A FNEM+ +G P ++Y L + + ++A FDEM +D V+ +
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQD----KSVEIYSAMVNGYCEA 172
M++EG C +G + +A+ +R+++ +V Y ++ NG +A
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 122/325 (37%), Gaps = 36/325 (11%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRV---KNIDLDIKHYTTLIKGYCLQGNLIDAF 78
D Y + K G+V D M E +R +N D YTT++ + G + A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 79 YMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD-GVEPNSTTHKMIIEG 137
+ EM G + +TYNVL G C+ + A + EM D G+EP+ ++ +II+G
Sbjct: 473 QVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDG 532
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASNNN--NNYGDDKSPTPISEV 191
+ A A FN ++ + + Y+ ++ + + N D+ P +V
Sbjct: 533 CILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV 592
Query: 192 ----------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
GYC++ L+E A + + G + L + G A+ L
Sbjct: 593 DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ ++ C V K + PD T+ + R
Sbjct: 653 KEIKE----------------RCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRA 696
Query: 302 NSLKEALDLFQDMKRRGIKPDVITY 326
K+AL++ M+ GI P+ Y
Sbjct: 697 AFFKKALEIIACMEENGIPPNKTKY 721
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 9 DKFKEFKE-SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
D +E E +G+ D V+YNI+ D + A+ E+R + I YTTL+K
Sbjct: 508 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKA 567
Query: 68 YCLQGNLIDAFYMFNEMKN-KGFKPDIVTYNVLAAGVCR----NDEARVAINNFDEMESD 122
+ + G A +F+EM N K D++ +N+L G CR D RV M+ +
Sbjct: 568 FAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRV----VSRMKEN 623
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK 157
G PN T+ + G+ K G+A + ++++
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/479 (18%), Positives = 188/479 (39%), Gaps = 81/479 (16%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F+E E D + YN++ ++G+ + + + E + K I + + +L+ Y
Sbjct: 259 FEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVG 318
Query: 71 QGNLIDAFYMFNEMKNKGFKPDI-------------------------VTYNVLAAGVCR 105
G+L A + M+ K + D+ + +G
Sbjct: 319 FGDLRTAERIVQAMREK--RRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSA 376
Query: 106 NDEA--RVAINNFDEMESDGVE-------------PNSTTHKMIIEGLCSVGKVGEAEAH 150
DE ++ F ++ + V+ P+S + +++G G+V +
Sbjct: 377 RDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVAD---- 432
Query: 151 FNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELS 210
+ + AM ++ N++ D+ + T + + L+++A ++ E++
Sbjct: 433 -------TARMLEAM-----RRQDDRNSHPDEVTYTTVVS-AFVNAGLMDRARQVLAEMA 479
Query: 211 NKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM-RSLNVEPSQIMYSIVLDALCHVGKT 269
G A + LL C I +A LL M +EP + Y+I++D + +
Sbjct: 480 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS 539
Query: 270 KHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR-RGIKPDVITYTV 328
A + F+ RG P ++YTT++ ++ K A +F +M +K D+I + +
Sbjct: 540 AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 329 LLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK 388
L+ G + D + R MK+ +V Y L NG+ + DA+ L++++ ++
Sbjct: 600 LVEGYCRLGLIEDAQRVVSR-MKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658
Query: 389 G-------------------LEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L+PD+ + + + K+A E++ M G+ P+
Sbjct: 659 CAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPN 717
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 358 DVVCYSVLINGLMKTDNYEDAIRLFEDMI---DKGLEPDKVTYTDMISLYYKKGLMKEAS 414
D Y+ L+ G MK D R+ E M D+ PD+VTYT ++S + GLM A
Sbjct: 413 DSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRAR 472
Query: 415 ELLDEMSSKGMTPSSHI 431
++L EM+ G+ P++ I
Sbjct: 473 QVLAEMARMGV-PANRI 488
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 208/498 (41%), Gaps = 103/498 (20%)
Query: 10 KFKEFKES----------GMFLDGVAYNIVFDALCKLG--KVDDAIEMREELRVKNIDLD 57
KF+ FKE G+ D + +IV +CK G + ++ ++ + ++D D
Sbjct: 145 KFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD 204
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVL-----AAGVC-------- 104
T LI Y G IDA+ +F E+++ K ++V +NV+ +G+C
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIED---KSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 105 --RNDEARVAINNF-------DEMESDGV---------------EPNSTTHKMIIEGLCS 140
+N+ ++ +F + E+ G +P T + + C
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC- 320
Query: 141 VGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVE 200
G VGEAE F+ + DK +EI++AMV Y E N+YG
Sbjct: 321 -GMVGEAETVFSCVVDKRLEIWNAMVAAYAE-----NDYG-------------------Y 355
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVL 260
A +LF + K + + +++ ++G + + ++ + + S +L
Sbjct: 356 SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL 415
Query: 261 DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK--RRG 318
G A +F S + D+V + ++I+ C+ KEAL +F DMK
Sbjct: 416 TLYSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 319 IKPDVITYTVLLYGSFKNA-AALDVIN---TIWRDMKQTEISLDVVCYSVLINGLMKTDN 374
+KPD T S NA A L+ + + M +T + L+V S LI+ K
Sbjct: 472 LKPDSDIMT-----SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 375 YEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
E A+++F M + + V + MIS Y + L + + +L + M S+G+ P S I++
Sbjct: 527 PEMALKVFTSMSTENM----VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITS 582
Query: 435 V------NRSILKARKVQ 446
V S+LK + +
Sbjct: 583 VLVAISSTASLLKGKSLH 600
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 154/369 (41%), Gaps = 44/369 (11%)
Query: 96 YNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE-----GLCSVGKVGEAEAH 150
+N + A ND A++ F M V P+S T +I GL + GK AE
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL- 399
Query: 151 FNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV-------GYCKVDLVEKAY 203
F R + I SA++ Y + + + Y KS V G CK ++A
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMR-SLNVEPSQIMYSIVL-- 260
++F ++ + D K +S ++T + A LE +R L V S I +VL
Sbjct: 460 KVFGDMKDDDDSLKPDS--DIMT------SVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 261 -------DALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQD 313
D G + A +F S T ++V + +MI+ Y R N + ++DLF
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNL 567
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTD 373
M +GI PD ++ T +L + + A+L ++ + I D + LI+ +K
Sbjct: 568 MLSQGIFPDSVSITSVLV-AISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 374 NYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS---- 429
+ A +F+ M K L +T+ MI Y G A L DEM G +P
Sbjct: 627 FSKYAENIFKKMQHKSL----ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFL 682
Query: 430 HIISAVNRS 438
+ISA N S
Sbjct: 683 SLISACNHS 691
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 184/485 (37%), Gaps = 70/485 (14%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
+D F ++ + D + V LG + + EL + I + L+
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM--ESDGVE 125
Y G DA+ +F M+ K D+V + L +G+C+N + + A+ F +M + D ++
Sbjct: 418 YSKCGCDPDAYLVFKSMEEK----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 126 PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSP 185
P+S + + EA LQ I + +V S+ + Y P
Sbjct: 474 PDSDIMTSVTNACAGL------EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 186 TPISEV-----------------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL 228
+V Y + +L E + +LF + ++G S +L +
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 229 CLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDV 288
+ K L L + + + ++D G +K+A ++F + +
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK----SL 643
Query: 289 VTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL------------------ 330
+T+ MI Y AL LF +MK+ G PD +T+ L+
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 331 ----YGSFKN----AAALDVINTI------WRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
YG N A +D++ + +K I D + L++ N E
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 377 DAIRLFEDMIDKGLEPDK-VTYTDMISLYYKKGLMKEASELLDEMSSKGM--TPSSHIIS 433
I E ++ +EP++ TY +I+LY + GL EA++LL M KG+ P I
Sbjct: 764 LGILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIE 821
Query: 434 AVNRS 438
+R+
Sbjct: 822 VSDRT 826
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 152/351 (43%), Gaps = 40/351 (11%)
Query: 105 RNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK---SVEI 161
R D+ R A+ FD M G++PN+ + L G + +A F ++ K +
Sbjct: 119 RLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHT 178
Query: 162 YSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESC 221
YS M+ ++EV C E A +F EL + K SC
Sbjct: 179 YSLMLKA-------------------VAEVKGC-----ESALRMFRELERE---PKRRSC 211
Query: 222 FKLLTKLCLVGDIGKAMKLLETMRSLNVEP------SQIMYSIVLDALCHVGKTKHARSL 275
F ++ + G+ + ET R V ++I YS+++ G+++ A +
Sbjct: 212 FDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDV 271
Query: 276 FDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
+D V + MI++ + AL +FQ M ++G+KP+++ L+ S
Sbjct: 272 YDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLI-NSLG 330
Query: 336 NAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGL--EPD 393
A + ++ ++ +K D ++ L+ L K + YED ++LF+ + + L +
Sbjct: 331 KAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNE 390
Query: 394 KVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARK 444
+ T M+S K G ++A +LL EM G+T S+ + V + K+RK
Sbjct: 391 YLYNTAMVSCQ-KLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRK 440
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 195 KVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL-NVEPSQ 253
++D V A ELF + G +C L+ L GDI KA + E MR NV
Sbjct: 119 RLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHT 178
Query: 254 IMYSIVLDALCHVGKTKHARSLFDSF---VGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
YS++L A+ V + A +F R DVV Y T I+ R+N++ E +
Sbjct: 179 --YSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERI 236
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
++ MK G ITY+ LL F ++ ++ +M +ISL +I+
Sbjct: 237 WRVMKGDGHIGTEITYS-LLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACT 295
Query: 371 KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSH 430
K + ++ A+++F+ M+ KG++P+ V +I+ K G + ++ + S G P +
Sbjct: 296 KEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEY 355
Query: 431 IISAVNRSILKARKVQ 446
+A+ ++ KA + +
Sbjct: 356 TWNALLTALYKANRYE 371
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 166/395 (42%), Gaps = 34/395 (8%)
Query: 13 EFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRV---KNIDLDIKHYTTLIKGYC 69
EF + G Y+++ A+ ++ + A+ M EL + D+ Y T I
Sbjct: 166 EFMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG 225
Query: 70 LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNST 129
N+ + ++ MK G +TY++L + R + +A++ +DEM ++ +
Sbjct: 226 RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED 285
Query: 130 THKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+I K D +++I+ +M+ + N + +
Sbjct: 286 AMYAMISACTKEEK-----------WDLALKIFQSML----KKGMKPNLVACNTLINSLG 330
Query: 190 EVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNV 249
+ G KV LV K Y + L +K D E + LLT L ++L + +RS N+
Sbjct: 331 KAG--KVGLVFKVYSVLKSLGHKPD---EYTWNALLTALYKANRYEDVLQLFDMIRSENL 385
Query: 250 EP-SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEAL 308
++ +Y+ + + +G + A L G G T +Y +I++ + K AL
Sbjct: 386 CCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVAL 445
Query: 309 DLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQT--EISLDVVCYSVLI 366
+++ M +R KP+ TY L+ + ++W +++ ++ DV Y+ I
Sbjct: 446 LVYEHMAQRDCKPNTFTYLSLVRSC--------IWGSLWDEVEDILKKVEPDVSLYNAAI 497
Query: 367 NGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMI 401
+G+ ++ A L+ M + GLEPD T M+
Sbjct: 498 HGMCLRREFKFAKELYVKMREMGLEPDGKTRAMML 532
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 25/250 (10%)
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
FLE N EE+ K L KL + + A++L ++MR L ++P+ + L L
Sbjct: 101 FLEERN------EETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLR 154
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP---D 322
G + A ++F+ F+ + TY+ M+ + + + AL +F++++R + D
Sbjct: 155 NGDIQKAFTVFE-FMRKKENVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFD 213
Query: 323 VITY--TVLLYGSFKNAAALDVINTIWRDMK-----QTEISLDVVCYSVLINGLMKTDNY 375
V+ Y + L G N + IWR MK TEI+ YS+L++ ++
Sbjct: 214 VVLYNTAISLCGRINNVYETE---RIWRVMKGDGHIGTEIT-----YSLLVSIFVRCGRS 265
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
E A+ ++++M++ + + MIS K+ A ++ M KGM P+ + +
Sbjct: 266 ELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTL 325
Query: 436 NRSILKARKV 445
S+ KA KV
Sbjct: 326 INSLGKAGKV 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 129/323 (39%), Gaps = 30/323 (9%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ K G + Y+++ + G+ + A+++ +E+ I L +I
Sbjct: 237 WRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTK 296
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
+ A +F M KG KP++V N L + + + + + ++S G +P+ T
Sbjct: 297 EEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE 190
++ L + + F+ ++ +++ N Y + + +
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSENLCCL--------------NEYLYNTAMVSCQK 402
Query: 191 VGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK-AMKLLETMRSLNV 249
+GY EKA +L E+ G + S + L+ C K A+ + E M +
Sbjct: 403 LGY-----WEKAVKLLYEMEGSG-LTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDC 456
Query: 250 EPSQIMYSIVLDALCHVGKTKHARSLFDSF--VGRGFTPDVVTYTTMINSYCRMNSLKEA 307
+P+ Y + L C G SL+D + + PDV Y I+ C K A
Sbjct: 457 KPNTFTY-LSLVRSCIWG------SLWDEVEDILKKVEPDVSLYNAAIHGMCLRREFKFA 509
Query: 308 LDLFQDMKRRGIKPDVITYTVLL 330
+L+ M+ G++PD T ++L
Sbjct: 510 KELYVKMREMGLEPDGKTRAMML 532
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 5/138 (3%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G V E + SG+ + +YN+V A K K A+ + E + ++ +
Sbjct: 403 LGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFT 462
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +L++ C+ G+L D E K +PD+ YN G+C E + A + +M
Sbjct: 463 YLSLVRS-CIWGSLWDEV----EDILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMR 517
Query: 121 SDGVEPNSTTHKMIIEGL 138
G+EP+ T M+++ L
Sbjct: 518 EMGLEPDGKTRAMMLQNL 535
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 161/374 (43%), Gaps = 24/374 (6%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + +LC+ + A EEL D + LI C +G++ A +E+ +
Sbjct: 327 NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMS 386
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
KG+KPD+ +YN + +G+ R + DEM+ +G+ + +T K+++ G C + E
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEA--------------SNNNNNYGDDKSPTPISEVG 192
A+ N++ + S + + EA +N++ + + +
Sbjct: 447 AKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGL 506
Query: 193 YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPS 252
Y DL AYE + + + E + L+ + GD+ A++LL+ M + S
Sbjct: 507 YLHTDL--DAYEQRVNMVLDRSVLPEFN--SLIVRASEDGDLQTALRLLDEMARWGQKLS 562
Query: 253 QIMYSIVLDALCHVGKTKHAR---SLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALD 309
+ +++++ +LC H R SL + + + D T ++ YC+ + +
Sbjct: 563 RRSFAVLMRSLC--ASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSRHSKL 620
Query: 310 LFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGL 369
+F M + D +TYT L+ K D++N +W + D+ L N L
Sbjct: 621 IFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLN-VWGAAQNDNWLPDLNDCGDLWNCL 679
Query: 370 MKTDNYEDAIRLFE 383
++ E+ ++LFE
Sbjct: 680 VRKGLVEEVVQLFE 693
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/423 (20%), Positives = 165/423 (39%), Gaps = 34/423 (8%)
Query: 21 LDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYM 80
LDG N + CK G + + ++ + +D YT+LI+ +C + L D +
Sbjct: 597 LDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNV 656
Query: 81 FNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCS 140
+ +N + PD+ L + R + F+ + S ++ +E L
Sbjct: 657 WGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTV 716
Query: 141 VGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV 196
+G A + RL+ + E+Y+ ++ G C ++
Sbjct: 717 LGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDS-------------------- 756
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
A+ + E+ +K I SC L+ +LC G A L E ++ S + Y
Sbjct: 757 ----AAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAE-----QIDSSYVHY 807
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
+++ L GK A + + G + Y M YC+ N+ + ++ M R
Sbjct: 808 ALI-KGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVR 866
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYE 376
+ I V +Y + +L I+ + V+ Y++LI + + N+
Sbjct: 867 KNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHL 926
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
+ ++ +M +G+ PD+ T+ ++ Y + L M SKGM P++ + AV
Sbjct: 927 EVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVT 986
Query: 437 RSI 439
S+
Sbjct: 987 SSL 989
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 193/487 (39%), Gaps = 63/487 (12%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ +VV F+ S A I + L LG A + + L + ++ + Y
Sbjct: 683 GLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVY 742
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
LIKG C + AF + +EM +K P + + +L +CR ++A A N ++++S
Sbjct: 743 NHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDS 802
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNN 177
S H +I+GL GK+ +AE + + +IY+ M GYC+ NN
Sbjct: 803 ------SYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKG--NNW 854
Query: 178 NYGDDKSPTPISEVGYCKV-DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGK 236
++ + + C V E ++ LE + I+ +E F LL + G I
Sbjct: 855 MKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKE--FLLLGESNPGGVIIY 912
Query: 237 AM---------------KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVG 281
M K+L M+ V P + ++ ++ + + +
Sbjct: 913 NMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMIS 972
Query: 282 RGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG------IKPDVITYTVLLYGSFK 335
+G P+ + + +S C +K+ALDL+Q M+ +G + I T++ G
Sbjct: 973 KGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIP 1032
Query: 336 NA---------------------------AALDVINTIWRDMKQTEISLDVVCYSVLING 368
A LD+ + M + + Y +ING
Sbjct: 1033 KAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVING 1092
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS 428
L++ + + A+ +M++ GL P T++ ++ + + + E+ L+ M G +PS
Sbjct: 1093 LLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPS 1152
Query: 429 SHIISAV 435
+ V
Sbjct: 1153 QEMFKTV 1159
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 154/397 (38%), Gaps = 51/397 (12%)
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLA---AGVCRNDEARVAINNFDEMESDGVEPNSTTHKM 133
A +F+ M+ KG P Y +L V R + A ++ E ++ N +
Sbjct: 202 AVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 134 IIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+IE LC KV EA +L IYS + GY N ++ D S I
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGY----NEKQDFEDLLSF--IG 315
Query: 190 EVGY--------------CKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV-GDI 234
EV Y C+ E+AY EL + G ++E F +L C GDI
Sbjct: 316 EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLG-FKQDEVTFGILIGWCCYEGDI 374
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+A+ L + S +P Y+ +L L G +H + D G + T+ M
Sbjct: 375 KRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIM 434
Query: 295 INSYCRMNSLKEALDLFQDMKRRGI-----KPDVITYTVLLYGSFKNAAALDVINTIWRD 349
+ YC+ +EA + M G+ D ++ L G A L RD
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLK------RD 488
Query: 350 MKQTEISLDVVCYSVLINGL---MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
T + + L NGL D YE + + ++D+ + P+ + +I +
Sbjct: 489 NDSTFSKAEF--FDDLGNGLYLHTDLDAYEQRVNM---VLDRSVLPE---FNSLIVRASE 540
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKAR 443
G ++ A LLDEM+ G S + + RS+ +R
Sbjct: 541 DGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASR 577
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 6/191 (3%)
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRG 318
V++ LC K + AR L V G + Y+ + Y ++ L ++K
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK--- 318
Query: 319 IKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDA 378
+PDV +L+ + + + +++ D V + +LI + + A
Sbjct: 319 YEPDVFVGNRILHSLCRRFGS-ERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRA 377
Query: 379 IRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRS 438
+ +++ KG +PD +Y ++S ++KGL + +LDEM GM S +
Sbjct: 378 VLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTG 437
Query: 439 ILKARKVQFHE 449
KAR QF E
Sbjct: 438 YCKAR--QFEE 446
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/412 (21%), Positives = 172/412 (41%), Gaps = 45/412 (10%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y ++K + +F E++ +G PD T V+ + R +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G+E +S ++ S+GK+ F+ + + V ++ +++ Y + G
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 181 DDK-----------SPTPISEVGYCK----VDLVEKAYELFL---ELSNKGDIAKEESCF 222
K T +S + C +++ E+ Y + E+S + A
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNA------ 187
Query: 223 KLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR 282
L+ C G + KA + ++MR NV+ ++ ++ G+ AR LF+ R
Sbjct: 188 -LVDMFCKCGCLDKARAVFDSMRDKNVK----CWTSMVFGYVSTGRIDEARVLFE----R 238
Query: 283 GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDV 342
DVV +T M+N Y + N EAL+LF+ M+ GI+PD LL G AL+
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC-AQTGALEQ 297
Query: 343 INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
I + + +++D V + L++ K E A+ +F ++ ++ D ++T +I
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIY 353
Query: 403 LYYKKGLMKEASELLDEMSSKGMTPSS----HIISAVNRS--ILKARKVQFH 448
G+ A +L EM + G+ + +++A N + + RK+ FH
Sbjct: 354 GLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKI-FH 404
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 163/421 (38%), Gaps = 68/421 (16%)
Query: 16 ESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLI 75
++G+ D N + LGK++ ++ +E+ + D+ + LI Y G
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYVGNGRFE 129
Query: 76 DAFYMFNEMK---NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHK 132
DA +F M N F + + A +N E I F E E +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE---FEMSVRIGN 186
Query: 133 MIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV- 191
+++ C G + +A A F+ ++DK+V+ +++MV GY ++ + +P+ +V
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYV-STGRIDEARVLFERSPVKDVV 245
Query: 192 -------GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETM 244
GY + + ++A ELF + G LLT G + + + +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 245 RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
V +++ + ++D G + A +F R D ++T++I
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMNGMS 361
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLL----YGSFKNAAALDVINTIWRDMKQTEISLDVV 360
ALDL+ +M+ G++ D IT+ +L +G F
Sbjct: 362 GRALDLYYEMENVGVRLDAITFVAVLTACNHGGF-------------------------- 395
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
+ ++F M ++ ++P + +I L + GL+ EA EL+D+
Sbjct: 396 --------------VAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDK 441
Query: 420 M 420
M
Sbjct: 442 M 442
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 188/432 (43%), Gaps = 34/432 (7%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
++N + A K G + + E+L D D + LI+GY L G + A +N M
Sbjct: 74 SWNNLLLAYSKAGLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINN--FDEMESDGVEPNSTTHKMIIEGLCSVG 142
+ F ++ ++ + V++ ++ G E ++ +VG
Sbjct: 130 M-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 143 KVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNY----GDDKSPTPISEV--GYCKV 196
+ +A+ F L D++ +Y++++ G + G +K + + G +
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 197 DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMY 256
L ++A E F E+ +G + +L +G I + ++ + N + +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 257 SIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKR 316
S ++D C +A+++FD R +VV++T M+ Y + +EA+ +F DM+R
Sbjct: 309 SALIDMYCKCKCLHYAKTVFD----RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 317 RGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM----KT 372
GI PD T + + N ++L+ + I+ ++ Y + N L+ K
Sbjct: 365 SGIDPDHYTLGQAI-SACANVSSLEEGS----QFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPS---- 428
+ +D+ RLF +M + D V++T M+S Y + G E +L D+M G+ P
Sbjct: 420 GDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 429 SHIISAVNRSIL 440
+ +ISA +R+ L
Sbjct: 476 TGVISACSRAGL 487
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 171/420 (40%), Gaps = 79/420 (18%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V YN + L G ++DA+++ + ++ D + +IKG G +A F E
Sbjct: 206 VMYNSLMGGLLACGMIEDALQL-----FRGMEKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 84 MKNKGFKPDIVTY-NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH----KMIIEGL 138
MK +G K D + +VL A C AIN ++ + + N H +I+
Sbjct: 261 MKVQGLKMDQYPFGSVLPA--C---GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 139 CSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDL 198
C + A+ F+R++ K+V ++AMV VGY +
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMV------------------------VGYGQTGR 351
Query: 199 VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSI 258
E+A ++FL++ G + +G+A+ + SL E SQ
Sbjct: 352 AEEAVKIFLDMQRSGIDPDHYT-------------LGQAISACANVSSLE-EGSQFHGKA 397
Query: 259 VLDALCH--------------VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSL 304
+ L H G + LF+ R D V++T M+++Y +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRA 453
Query: 305 KEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM-KQTEISLDVVCYS 363
E + LF M + G+KPD +T T ++ + A ++ ++ M + I + YS
Sbjct: 454 VETIQLFDKMVQHGLKPDGVTLTGVI-SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 364 VLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG---LMKEASELLDEM 420
+I+ ++ E+A+R M PD + +T ++S KG + K A+E L E+
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 160/401 (39%), Gaps = 78/401 (19%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM- 119
Y ++ Y L + A +F+ + +P++ ++N L + + F+++
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIP----QPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 120 ESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL-QDKSVEIYSAMVNGYCEASNNNNN 178
+ DGV T ++IEG G VG A +N + +D S + + + S++N +
Sbjct: 100 DRDGV-----TWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 179 YGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAM 238
K +++ +E +L + + LL VG I A
Sbjct: 155 VSLGKQ---------IHGQVIKLGFESYLLVGSP-----------LLYMYANVGCISDAK 194
Query: 239 KLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSY 298
K+ + N +MY+ ++ L G + A LF RG D V++ MI
Sbjct: 195 KVFYGLDDRNT----VMYNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGL 245
Query: 299 CRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGS------------------------- 333
+ KEA++ F++MK +G+K D + +L
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 334 FKNAAALDV---------INTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFED 384
+ +A +D+ T++ MKQ +VV ++ ++ G +T E+A+++F D
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 385 MIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGM 425
M G++PD T IS ++E S+ + + G+
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 183/428 (42%), Gaps = 103/428 (24%)
Query: 60 HYTTLIKG----YCLQGNLIDAFYMFNEMK------NKGFKPDIVTYNVLAAGVCRNDEA 109
H +++G L+ +L+D + F++M+ N + D+ + + +G RN A
Sbjct: 247 HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRA 306
Query: 110 RVAINNFDEMESDGVEPNSTTHKMIIEGLCSV------GKVGEAEAHFNRLQDKSVEIYS 163
+ A+ F EM S G++PN+ T+ I+ LCS GK ++ +D S ++ +
Sbjct: 307 KEAVGTFLEMRSLGLQPNNFTYSAILS-LCSAVRSLDFGKQIHSQTIKVGFED-STDVGN 364
Query: 164 AMVNGY--CEASN--NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEE 219
A+V+ Y C AS + +G SP +S L L L + G + +
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSPNVVSWT------------TLILGLVDHGFV---Q 409
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFD-- 277
CF LL + M VEP+ + S VL A K +H R + +
Sbjct: 410 DCFGLLME----------------MVKREVEPNVVTLSGVLRA---CSKLRHVRRVLEIH 450
Query: 278 -SFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSF-- 334
+ R ++V +++++Y + A ++ + MKRR D ITYT L+ F
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVT-RFNE 505
Query: 335 --KNAAALDVINTIWRD-MKQTEISL-----------------DVVCYSV---------L 365
K+ AL VIN ++ D ++ ++SL + CYSV +
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASV 565
Query: 366 INGLM----KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
+N L+ K + EDA ++FE++ PD V++ ++S G + A +EM
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIAT----PDVVSWNGLVSGLASNGFISSALSAFEEMR 621
Query: 422 SKGMTPSS 429
K P S
Sbjct: 622 MKETEPDS 629
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 10/244 (4%)
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
+ K A LF E+ G E + ++ + DI ++ ++ E
Sbjct: 98 AFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEG 157
Query: 252 SQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLF 311
+ ++ S + D G+ K A LF S D +++T MI+S +EAL +
Sbjct: 158 NSVVGSSLSDLYSKCGQFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFY 213
Query: 312 QDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMK 371
+M + G+ P+ T+ LL S + L+ TI ++ I L+VV + L++ +
Sbjct: 214 SEMVKAGVPPNEFTFVKLLGAS--SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ 271
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
EDA+R+ ++ E D +T ++S + + KEA EM S G+ P++
Sbjct: 272 FSKMEDAVRV----LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 432 ISAV 435
SA+
Sbjct: 328 YSAI 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 177/430 (41%), Gaps = 74/430 (17%)
Query: 51 VKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEAR 110
++N+DL L+ Y + +A +F+EM ++ + + V+ + ++ E
Sbjct: 55 LENLDL----CNNLLSLYLKTDGIWNARKLFDEMSHR----TVFAWTVMISAFTKSQEFA 106
Query: 111 VAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYC 170
A++ F+EM + G PN T ++ L+D S Y V+G
Sbjct: 107 SALSLFEEMMASGTHPNEFTFSSVVRSCAG-------------LRDIS---YGGRVHGSV 150
Query: 171 EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
+ N S + + Y K ++A ELF L N I S +++ L
Sbjct: 151 IKTGFEGNSVVGSSLSDL----YSKCGQFKEACELFSSLQNADTI----SWTMMISSLVG 202
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG----KTKHAR------------- 273
+A++ M V P++ + +L A +G KT H+
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK 262
Query: 274 -SLFDSF------------VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK 320
SL D + + DV +T++++ + R KEA+ F +M+ G++
Sbjct: 263 TSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ 322
Query: 321 PDVITYTVLLYGSFKNAA-ALDVINTIWRDMKQT--EISLDVVCYSVLINGLMKTDNYE- 376
P+ TY+ +L S +A +LD I + E S DV + L++ MK E
Sbjct: 323 PNNFTYSAIL--SLCSAVRSLDFGKQIHSQTIKVGFEDSTDV--GNALVDMYMKCSASEV 378
Query: 377 DAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVN 436
+A R+F M+ P+ V++T +I G +++ LL EM + + P+ +S V
Sbjct: 379 EASRVFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVL 434
Query: 437 RSILKARKVQ 446
R+ K R V+
Sbjct: 435 RACSKLRHVR 444
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 167/388 (43%), Gaps = 55/388 (14%)
Query: 75 IDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMI 134
++A +F M P++V++ L G+ + + EM VEPN T +
Sbjct: 378 VEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGV 433
Query: 135 IEGLCS----VGKVGEAEAHFNRLQ-DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPIS 189
+ CS V +V E A+ R D + + +++V+ Y + + + +S
Sbjct: 434 LRA-CSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRD 492
Query: 190 EVGYCKVDLVEK-----AYELFLELSNK--GDIAKEESCFKLLTKLCLVGDIGKAMKL-- 240
+ Y LV + +E+ L + N GD + + +L L G I + L
Sbjct: 493 NITY--TSLVTRFNELGKHEMALSVINYMYGDGIR-------MDQLSLPGFISASANLGA 543
Query: 241 LETMRSLNV--------EPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
LET + L+ + ++ S+V D G + A+ +F+ TPDVV++
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLV-DMYSKCGSLEDAKKVFEEIA----TPDVVSWN 598
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+++ + AL F++M+ + +PD +T+ +LL + N D+ ++ MK+
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILL-SACSNGRLTDLGLEYFQVMKK 657
Query: 353 T-EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
I V Y L+ L + E+A + E M L+P+ + + ++ +G +
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRGNL- 713
Query: 412 EASELLDEMSSKGMT-----PSSHIISA 434
L ++M++KG+ P+ +I+ A
Sbjct: 714 ---SLGEDMANKGLALAPSDPALYILLA 738
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 143/361 (39%), Gaps = 68/361 (18%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ +IK Y L G +++ F+ MK++G D TY L + R E+
Sbjct: 70 FNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELI 129
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G ++E S G++G+A+ F+ + +++V +++ M+ G+C++ G
Sbjct: 130 RTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDS-------G 182
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
D VE+ LF ++S
Sbjct: 183 D-----------------VERGLHLFKQMS------------------------------ 195
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCR 300
E S + ++ ++ +L G+ + A LF + +GF PD T T++
Sbjct: 196 ---------ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISAS 246
Query: 301 MNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVV 360
+ L + + G+ D IT L + + L+ I+R M++ +VV
Sbjct: 247 LGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRR----NVV 302
Query: 361 CYSVLINGLMKTDNYEDAIRLFEDMIDKG-LEPDKVTYTDMISLYYKKGLMKEASELLDE 419
++ LI+G E I LF+ MI++G + P++ T+ +++ G ++ EL
Sbjct: 303 SWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGL 362
Query: 420 M 420
M
Sbjct: 363 M 363
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 34/180 (18%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG-------SFKNAA 338
P+V+ + MI Y + E+L F MK RGI D TY LL F
Sbjct: 65 PNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCV 124
Query: 339 ALDVINTIWRDMKQTEISL-----------------------DVVCYSVLINGLMKTDNY 375
++I T + + + I + +VV ++++I G + +
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDV 184
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
E + LF+ M ++ + V++ MIS K G +EA EL EM +G P + V
Sbjct: 185 ERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 2/192 (1%)
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
++I+L A C + K ARS+F+ R F PDV T ++ + + + +M
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+RG KP+ +TY + + G K + + ++ DM + + + V + LI+G N
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALR-LFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
A +LF+++ +GL PD Y ++S K G + A +++ EM KG+ P S ++
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 436 NRSILKARKVQF 447
++K+++ F
Sbjct: 357 FIGMMKSKEFGF 368
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 138/338 (40%), Gaps = 50/338 (14%)
Query: 33 LCKLGK-------VDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMK 85
LCK+ K ++ ++M +E+ K +D + L++ +C + + +A +F ++
Sbjct: 146 LCKIAKFGSYEETLEAFVKMEKEIFRKKFGVD--EFNILLRAFCTEREMKEARSIFEKLH 203
Query: 86 NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVG 145
++ F PD+ T N+L G + + EM G +PNS T+ + I+G C G
Sbjct: 204 SR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFG 262
Query: 146 EAEAHF---NRLQ-DKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
EA F +RL D +V+I + +++G A N K
Sbjct: 263 EALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI------------------------K 298
Query: 202 AYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLD 261
A +LF E+S +G + L++ L GD+ A+K+++ M +EP + + +
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF- 357
Query: 262 ALCHVGKTKHARSLFDSFV-------GRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
+G K F+ R P T ++ +C + LDL++ M
Sbjct: 358 ----IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ 352
+G P +L A D W+ +++
Sbjct: 414 LEKGYCPHGHALELLTTALCARRRANDAFECSWQTVER 451
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
+ E + G + V Y I D CK +A+ + E++ + D+ ++ TTLI G +
Sbjct: 233 YHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGV 292
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
N I A +F+E+ +G PD YN L + + + + AI EME G+EP+S T
Sbjct: 293 ARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVT 352
Query: 131 -HKMII 135
H M I
Sbjct: 353 FHSMFI 358
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 36/219 (16%)
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPS-QIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
C + G+A++L E M L+ + + QI+ +++ + K K AR LFD RG TP
Sbjct: 255 FCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIK-ARQLFDEISKRGLTP 313
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
D Y +++S + + A+ + ++M+ +GI+PD +T+ + G
Sbjct: 314 DCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGM------------- 360
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
MK E + VC ++ M ++ L P T ++ L+
Sbjct: 361 ---MKSKEFGFNGVC------------------EYYQKMKERSLVPKTPTIVMLMKLFCH 399
Query: 407 KGLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
G + +L M KG P H + + ++ R+
Sbjct: 400 NGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRA 438
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 161/399 (40%), Gaps = 81/399 (20%)
Query: 58 IKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTY-NVLAAGVCRND--EARVAIN 114
I +T ++ Y G ++A +F++M+ KPD V +VL A C D + R
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHA 246
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASN 174
+ +M + +EP+ + C G+V A+ F++++ ++ +++AM++GY A N
Sbjct: 247 SVVKMGLE-IEPDLLISLNTMYAKC--GQVATAKILFDKMKSPNLILWNAMISGY--AKN 301
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
GY + +A ++F E+ NK S ++ VG +
Sbjct: 302 -----------------GYAR-----EAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
+A + E + + + S ++D G + AR +FD + R DVV ++ M
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAM 395
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTE 354
I Y +EA+ L++ M+R G+ P+ +T+
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFL--------------------------- 428
Query: 355 ISLDVVCYSVLINGLMKTDNYEDAIR----LFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
GL+ N+ +R F M D + P + Y +I L + G +
Sbjct: 429 -------------GLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHL 475
Query: 411 KEASELLDEMSSKGMTPSSHIISAVNRSILKARKVQFHE 449
+A E++ M + P + A+ + K R V+ E
Sbjct: 476 DQAYEVIKCMP---VQPGVTVWGALLSACKKHRHVELGE 511
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/426 (20%), Positives = 175/426 (41%), Gaps = 69/426 (16%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
T LI G++ A +F+++ +P I +N + G RN+ + A+ + M+
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLP----RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 122 DGVEPNSTTHKMIIEGLCS------VGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNN 175
V P+S T +++ CS +G+ A+ F D V + + ++ Y +
Sbjct: 113 ARVSPDSFTFPHLLKA-CSGLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKC--- 167
Query: 176 NNNYGDDKS-----PTPISEV--------GYCKVDLVEKAYELFLELSNKGDIAKEE-SC 221
G ++ P P + Y + +A E+F ++ K D+ + +
Sbjct: 168 -RRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-RKMDVKPDWVAL 225
Query: 222 FKLLTKLCLVGDI--GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
+L + D+ G+++ L +EP ++ + A C G+ A+ LFD
Sbjct: 226 VSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC--GQVATAKILFDKM 283
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL-----YGSF 334
+P+++ + MI+ Y + +EA+D+F +M + ++PD I+ T + GS
Sbjct: 284 K----SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
Query: 335 KNAAAL-----------DV-INTIWRDMKQ-------------TEISLDVVCYSVLINGL 369
+ A ++ DV I++ DM + DVV +S +I G
Sbjct: 340 EQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399
Query: 370 MKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
+AI L+ M G+ P+ VT+ ++ G+++E + M+ + P
Sbjct: 400 GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQ 459
Query: 430 HIISAV 435
+ V
Sbjct: 460 QHYACV 465
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 128/329 (38%), Gaps = 31/329 (9%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G + ++ F + ++ + D VA V +A L + + + ++++
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+L Y G + A +F++MK+ P+++ +N + +G +N AR AI+ F EM +
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
V P++ + I VG + +A + + + ++Y D
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYV--------------------GRSDYRD 356
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
D + + K VE A +F ++ + ++ L G +A+ L
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS----AMIVGYGLHGRAREAISLY 412
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
M V P+ + + +L A H G + F+ P Y +I+ R
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLL 330
L +A ++ + M ++P V + LL
Sbjct: 473 GHLDQAYEVIKCMP---VQPGVTVWGALL 498
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/499 (19%), Positives = 195/499 (39%), Gaps = 89/499 (17%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
MG + F + E + DG + V A L ++ ++ + +++D
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
LI Y G +I A +FN M NK +I+++ L +G +N + A+ F M
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNK----NIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G++P+ I+ S+ +G + V+ Y + N G
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALG----------------FGTQVHAYTIKA----NLG 382
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL 240
+D T Y K D + A ++F ++ D+ + + ++L ++ +A+ +
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVF-DIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 241 LETMRSLNVEPSQIMYSIVLDA---LCHVGKTKHARSL-------FDSFVGRGF------ 284
MR + PS + + +L A L +G +K L D F G
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 285 ---------------TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVL 329
D+V + +M Y + + +EAL+LF +++ +PD T+ +
Sbjct: 502 CYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANM 561
Query: 330 LYGSFKNAAALDV------------------INTIWRDMKQ-------------TEISLD 358
+ + N A++ + I DM + S D
Sbjct: 562 VTAA-GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620
Query: 359 VVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLD 418
VVC++ +I+ + A+++ E M+ +G+EP+ +T+ ++S GL+++ + +
Sbjct: 621 VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680
Query: 419 EMSSKGMTP-SSHIISAVN 436
M G+ P + H + V+
Sbjct: 681 LMLRFGIEPETEHYVCMVS 699
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 186/441 (42%), Gaps = 60/441 (13%)
Query: 43 IEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAG 102
+++ L D D+ T LI Y GN+ A +F+ + K VT+ + +G
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK----STVTWTTMISG 223
Query: 103 VCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV------GKVGEAEAHFNRLQ- 155
+ + V++ F ++ D V P+ ++ CS+ GK + AH R
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSA-CSILPFLEGGK--QIHAHILRYGL 280
Query: 156 DKSVEIYSAMVNGYCE-----ASNNNNNYGDDKSPTPISEV--GYCKVDLVEKAYELFLE 208
+ + + +++ Y + A++ N +K+ + + GY + L ++A ELF
Sbjct: 281 EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS 340
Query: 209 LSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGK 268
+S G +C +LT + +G ++ N+ + + ++D
Sbjct: 341 MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC 400
Query: 269 TKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNS---LKEALDLFQDMKRRGIKPDVIT 325
AR +FD F DVV + MI Y R+ + L EAL++F+DM+ R I+P ++T
Sbjct: 401 LTDARKVFDIFAA----ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 326 YTVLLYGS-------------------------FKNAAALDVINTIWRDMKQTEISL--- 357
+ LL S F +A +DV + + +K + +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCY-CLKDSRLVFDEM 515
Query: 358 ---DVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
D+V ++ + G ++ E+A+ LF ++ PD+ T+ +M++ ++
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 415 ELLDEMSSKGMTPSSHIISAV 435
E ++ +G+ + +I +A+
Sbjct: 576 EFHCQLLKRGLECNPYITNAL 596
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 33/283 (11%)
Query: 54 IDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAI 113
++LDI + LI Y L D+ +F+EMK K D+V +N + AG + E A+
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK----DLVIWNSMFAGYVQQSENEEAL 540
Query: 114 NNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
N F E++ P+ T ++ ++ V + +L + +E + N +
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDM- 599
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCF-KLLTKLCLVG 232
Y K E A++ F +++ C+ +++ G
Sbjct: 600 -------------------YAKCGSPEDAHKAF-----DSAASRDVVCWNSVISSYANHG 635
Query: 233 DIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT 292
+ KA+++LE M S +EP+ I + VL A H G + F+ + G P+ Y
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV 695
Query: 293 TMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFK 335
M++ R L +A +L + M KP I + LL G K
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMP---TKPAAIVWRSLLSGCAK 735
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 158/362 (43%), Gaps = 44/362 (12%)
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
++ VTYN + R + + DEM++ G + M ++ V + +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAG-------YDMDLDTYIKVSRQFQK- 310
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNY---GDDKSPTPISEVGYCKVDLVEKAYEL 205
+R+ ++V++Y M++G + S + + SP P +DLV +
Sbjct: 311 ---SRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNP-------DLDLVFRVSRK 360
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
+ A + + LT VG +A ++ + MR+ EP I YS ++ LC
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTS---VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCK 417
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIK----- 320
+ + AR + D +G PD+ T+T +I +C+ N L +AL F +M +G
Sbjct: 418 AKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNL 477
Query: 321 PDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
DV+ +++ F+ A+ + +K + Y +LI+ L+K E+A+
Sbjct: 478 LDVLIDGFVIHNKFEGASIF-----LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALD 532
Query: 381 LFEDMIDKGLEPDKVTYTDMISLYYKK-GLMKEASELLDEMSSKGMTPS----SHIISAV 435
L + M+ K P Y + Y K G +++A + LD +SSK +PS H+I A
Sbjct: 533 LLQ-MMKKQNYP---AYAEAFDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAF 587
Query: 436 NR 437
R
Sbjct: 588 YR 589
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 12 KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQ 71
++++ +G L Y+ + +L +G+ D+A E+ + +R + D Y+ L+ G C
Sbjct: 359 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 418
Query: 72 GNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTH 131
L +A + ++M+ +G PDI T+ +L G C+N+E A+ F M G + +S
Sbjct: 419 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 478
Query: 132 KMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEV 191
++I+G H N+ + S+ + + N + + DK
Sbjct: 479 DVLIDGFV---------IH-NKFEGASIFLMEMVKNANVKPWQSTYKLLIDK-------- 520
Query: 192 GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEP 251
K+ E+A +L + + A E+ L K G + A K L+ + S + P
Sbjct: 521 -LLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF---GTLEDAKKFLDVLSSKD-SP 575
Query: 252 SQIMYSIVLDALCHVGKTKHARSLF 276
S Y V++A G+ A++L
Sbjct: 576 SFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 130/309 (42%), Gaps = 24/309 (7%)
Query: 24 VAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNE 83
V YN L + V + + +E++ D+D+ Y + + + + + ++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 84 MKNKGFKPDIVTYNVLAAGV--CRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSV 141
M + FKP I ++L + N + + + ES G + + I L SV
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSV 383
Query: 142 GKVGEAEAHFNRLQDKSVE----IYSAMVNGYCEASNNNNNYG------------DDKSP 185
G+ EAE +++ E YS +V G C+A G D K+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 186 TPISEVGYCKVDLVEKAYELFLELSNKG-DIAKEESCFKLLTKLCLVGDI--GKAMKLLE 242
T + + G+CK + ++KA F + KG DI + + +L ++ + G ++ L+E
Sbjct: 444 TILIQ-GHCKNNELDKALACFANMLEKGFDI--DSNLLDVLIDGFVIHNKFEGASIFLME 500
Query: 243 TMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMN 302
+++ NV+P Q Y +++D L + K++ A L + + + + + +
Sbjct: 501 MVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLE 560
Query: 303 SLKEALDLF 311
K+ LD+
Sbjct: 561 DAKKFLDVL 569
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 184/432 (42%), Gaps = 36/432 (8%)
Query: 17 SGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLID 76
SG+ +D +F + G++ DA ++ + + D D+ + L+ Y +G L +
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS----DKDVVTCSALLCAYARKGCLEE 200
Query: 77 AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE 136
+ +EM++ G + +IV++N + +G R+ + A+ F ++ G P+ T ++
Sbjct: 201 VVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 137 GLCSVGKVGEAEA-HFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCK 195
VG++E + RL V I ++ C S + YG I
Sbjct: 261 ------SVGDSEMLNMGRLIHGYV-IKQGLLKDKCVISAMIDMYGKSGHVYGI------- 306
Query: 196 VDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIM 255
+ L N+ ++ + C +T L G + KA+++ E + +E + +
Sbjct: 307 -----------ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 256 YSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
++ ++ GK A LF G P+ VT +M+ + + +L
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
R + +V + L+ + +++ ++ M ++VC++ L+NG
Sbjct: 416 RVHLLDNVHVGSALI-DMYAKCGRINLSQIVFNMMPTK----NLVCWNSLMNGFSMHGKA 470
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTPSSHIISA 434
++ + +FE ++ L+PD +++T ++S + GL E + MS + G+ P S
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 435 VNRSILKARKVQ 446
+ + +A K+Q
Sbjct: 531 MVNLLGRAGKLQ 542
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 51/307 (16%)
Query: 7 VVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
++ F +F+ M GV N L + G VD A+EM E + + ++L++ +T++I
Sbjct: 306 IISLFNQFE---MMEAGVC-NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPDIVTY--------NVLAAGVCRNDEA-RVAINNFD 117
G G I+A +F EM+ G KP+ VT N+ A G R+ V ++ D
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 118 EMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNN 177
N +I+ G++ ++ FN + K++ +++++NG+ +
Sbjct: 422 ---------NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF-------S 465
Query: 178 NYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKA 237
+G K V +E + K D S LL+ VG +
Sbjct: 466 MHGKAKE--------------VMSIFESLMRTRLKPDFISFTS---LLSACGQVGLTDEG 508
Query: 238 MKLLETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMIN 296
K + M ++P YS +++ L GK + A L F PD + ++N
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM---PFEPDSCVWGALLN 565
Query: 297 SYCRMNS 303
S CR+ +
Sbjct: 566 S-CRLQN 571
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/451 (20%), Positives = 187/451 (41%), Gaps = 62/451 (13%)
Query: 28 IVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNK 87
I+ A K+GK+D + + +I L+ +++L+ Y G + D + E K +
Sbjct: 458 IILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWR 517
Query: 88 GFKPDIVTYNVLAAGVCRNDEARVAINNFD-EMESDGVEPNSTTHKMIIEGLCSVGKVGE 146
+ Y++L + + A+ ++ +MESD E N +I+ +G+ E
Sbjct: 518 DSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDE-EINLHITSTMIDIYTVMGEFSE 576
Query: 147 AEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELF 206
AE + L+ V + D+ I Y K +E+A +
Sbjct: 577 AEKLYLNLKSSGVVL--------------------DRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 207 LELSNKGDIAKEESCFKLLTKLCLVGDIG-KAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
+ + DI + F+ + ++ D+ K L +R + +Q MY+ V++
Sbjct: 617 EIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCAR 676
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
F+ + GFTP+ VT+ +++ Y + K+ +LF KR G+ DVI+
Sbjct: 677 ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVIS 735
Query: 326 YTVLLYGSFKN------------------AAALDVINT----------------IWRDMK 351
Y ++ KN + +L+ NT I + MK
Sbjct: 736 YNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMK 795
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMK 411
++ D Y+++IN + ++ + +++ + GL PD +Y +I Y G+++
Sbjct: 796 KSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVE 855
Query: 412 EASELLDEMSSKGMTPS----SHIISAVNRS 438
EA L+ EM + + P +++++A+ R+
Sbjct: 856 EAVGLVKEMRGRNIIPDKVTYTNLVTALRRN 886
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 198/465 (42%), Gaps = 68/465 (14%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
F ++ G+ + AY+ + +L D A E+ + ++ + L ++++ ++ Y
Sbjct: 268 FSHMRKFGIVCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQ 326
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
QG + A + M+ GF P+I+ YN L G + + A F + + G+EP+ T+
Sbjct: 327 QGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETS 386
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRL-----QDKSVEIYSAMVNGYCEASNNNNNYGDD--- 182
++ +IEG EA+ ++ L + S +++ + N YGD
Sbjct: 387 YRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLI--------NLQAKYGDRDGA 438
Query: 183 -KSPTPISEVGYCK----VDLVEKAYE---------LFLELSNKGDIAKEESCF-KLLTK 227
K+ ++ +G C+ + ++ +AYE L+ S I ++ F L+
Sbjct: 439 IKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMA 497
Query: 228 LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPD 287
G + + LL + + +Y +++ + G+ A +++ + +
Sbjct: 498 YVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEIN 557
Query: 288 VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY-----GSFKNAAAL-- 340
+ +TMI+ Y M EA L+ ++K G+ D I +++++ GS + A ++
Sbjct: 558 LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 341 ------DVINTIW--RDM--------------------KQTEISLDVVCYSVLINGLMKT 372
D++ ++ RDM +++ I + Y+ +IN +
Sbjct: 618 IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677
Query: 373 DNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELL 417
++ FE+MI G P+ VT+ ++ +Y K L K+ +EL
Sbjct: 678 LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 132/346 (38%), Gaps = 29/346 (8%)
Query: 89 FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
F+ +N + + ++A F M GV PN T M++ V EAE
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAE 265
Query: 149 AHFNRLQDKSV---EIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYEL 205
F+ ++ + YS+M+ Y ++ L +KA E+
Sbjct: 266 FAFSHMRKFGIVCESAYSSMI------------------------TIYTRLRLYDKAEEV 301
Query: 206 FLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCH 265
+ K E+ +L G + A +L +M + P+ I Y+ ++
Sbjct: 302 IDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGK 361
Query: 266 VGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT 325
+ K + A+ LF G PD +Y +MI + R ++ +EA +Q++KR G KP+
Sbjct: 362 IFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFN 421
Query: 326 YTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDM 385
L+ K I TI DM + +++ K + + +
Sbjct: 422 LFTLINLQAKYGDRDGAIKTI-EDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGS 479
Query: 386 IDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHI 431
+ ++ +++ ++ Y K G++ + LL E + SH+
Sbjct: 480 FHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL 525
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 147/363 (40%), Gaps = 37/363 (10%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREEL-RVKNIDLDIK 59
MG S+ + K SG+ LD + ++IV K G +++A + E + K+I D+
Sbjct: 571 MGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVY 630
Query: 60 HYTTLIKGY--C-LQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNF 116
+ +++ Y C LQ L +Y ++ G + YN + R F
Sbjct: 631 LFRDMLRIYQKCDLQDKLQHLYY---RIRKSGIHWNQEMYNCVINCCARALPLDELSGTF 687
Query: 117 DEMESDGVEPNSTTHKMIIE--GLCSV-GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
+EM G PN+ T ++++ G + KV E R V Y+ ++ Y
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAY---- 743
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
N +Y + S + V L +AY L+ K
Sbjct: 744 GKNKDYTNMSSAIKNMQFDGFSVSL--EAYNTLLDAYGKDK------------------Q 783
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ K +L+ M+ P Y+I+++ G + G PD+ +Y T
Sbjct: 784 MEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNT 843
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN-TIWRDMKQ 352
+I +Y ++EA+ L ++M+ R I PD +TYT L+ +N L+ I ++W MKQ
Sbjct: 844 LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLW--MKQ 901
Query: 353 TEI 355
I
Sbjct: 902 MGI 904
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 134/320 (41%), Gaps = 33/320 (10%)
Query: 119 MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEI----YSAMVNGYCEASN 174
ME+ G PN + +I G + K+ A+ F+RL + +E Y +M+ G+ A N
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 175 NNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDI 234
E+A + EL G + F L+ GD
Sbjct: 400 ------------------------YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDR 435
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
A+K +E M + + S I+ I+L A VGK + + +++++
Sbjct: 436 DGAIKTIEDMTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSL 494
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQ-T 353
+ +Y + + + L L ++ K R + Y +L+ ++ D + M+
Sbjct: 495 VMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDE 554
Query: 354 EISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
EI+L + S +I+ + +A +L+ ++ G+ D++ ++ ++ +Y K G ++EA
Sbjct: 555 EINLHIT--STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEA 612
Query: 414 SELLDEM-SSKGMTPSSHII 432
+L+ M K + P ++
Sbjct: 613 CSVLEIMDEQKDIVPDVYLF 632
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/408 (19%), Positives = 169/408 (41%), Gaps = 44/408 (10%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
GM D + +E K + Y+++ + + G++ DA+++ + ++++
Sbjct: 502 GMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHIT 561
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEM-E 120
+T+I Y + G +A ++ +K+ G D + ++++ + A + + M E
Sbjct: 562 STMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 121 SDGVEPNSTTHK--MIIEGLCSVG--------KVGEAEAHFNRLQDKSVEIYSAMVNGYC 170
+ P+ + + I C + ++ ++ H+N+ E+Y+ ++N
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQ------EMYNCVINCCA 675
Query: 171 EASNNNNNYGDDK-------SPTPIS-----EVGYCKVDLVEKAYELFLELSNKGDIAKE 218
A + G + +P ++ +V Y K L +K ELFL +AK
Sbjct: 676 RALPLDELSGTFEEMIRYGFTPNTVTFNVLLDV-YGKAKLFKKVNELFL-------LAKR 727
Query: 219 ESCFKLLTKLCLVGDIGK------AMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHA 272
+++ ++ GK ++ M+ S Y+ +LDA + +
Sbjct: 728 HGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKF 787
Query: 273 RSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYG 332
RS+ PD TY MIN Y + E D+ +++K G+ PD+ +Y L+
Sbjct: 788 RSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKA 847
Query: 333 SFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIR 380
+ + + ++M+ I D V Y+ L+ L + D + +AI+
Sbjct: 848 YGIGGMVEEAVGLV-KEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 179/426 (42%), Gaps = 71/426 (16%)
Query: 18 GMFLDGVAYNIV-----------FDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIK 66
GM L GVA+ I D G+++ A + +E+ + D+ + T+I+
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR----DVVTWNTMIE 185
Query: 67 GYCLQGNLIDAFYMFNEMKNKGFKPD--IVTYNVLAAGVCRNDEARVAINNFDEMESDGV 124
YC G + +AF +F EMK+ PD I+ V A G N AI F +E+D V
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF-LIEND-V 243
Query: 125 EPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY--CEASNNNNNYGDD 182
++ ++ G + A F ++ +++ + +AMV+GY C ++ D
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 183 KS-------PTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
T IS Y + D ++A +F E+ G S F +++ +G +
Sbjct: 304 TEKKDLVCWTTMIS--AYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
KA + + +E + + +++ G R +F+ R +VV++++MI
Sbjct: 362 KAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMI 417
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
N+ +AL LF MK+ ++P+ +T+ +LYG
Sbjct: 418 NALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH-------------------- 457
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEAS 414
+GL+ E+ ++F M D+ + P Y M+ L+ + L++EA
Sbjct: 458 -----------SGLV-----EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 415 ELLDEM 420
E+++ M
Sbjct: 502 EVIESM 507
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 138/310 (44%), Gaps = 51/310 (16%)
Query: 37 GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTY 96
G +D A E ++ V+N+ + T ++ GY G L DA +F++ + K D+V +
Sbjct: 261 GCMDMAREFFRKMSVRNLFVS----TAMVSGYSKCGRLDDAQVIFDQTEKK----DLVCW 312
Query: 97 NVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEA-----HF 151
+ + +D + A+ F+EM G++P+ + +I ++G + +A+ H
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 152 NRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSN 211
N L+ + + I +A++N Y + ++ ++F ++
Sbjct: 373 NGLESE-LSINNALINMYAKCGG------------------------LDATRDVFEKMPR 407
Query: 212 KGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKH 271
+ + S ++ L + G+ A+ L M+ NVEP+++ + VL H G +
Sbjct: 408 RNVV----SWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEE 463
Query: 272 ARSLFDSFVGR-GFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+ +F S TP + Y M++ + R N L+EAL++ + M + V++
Sbjct: 464 GKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMP--------VASNVVI 515
Query: 331 YGSFKNAAAL 340
+GS +A +
Sbjct: 516 WGSLMSACRI 525
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 137/351 (39%), Gaps = 71/351 (20%)
Query: 112 AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE 171
A N FDEM V T +IE C G V EA F ++D +V ++
Sbjct: 165 ARNVFDEMSHRDV----VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
A N +++ YE +E + D + L+T
Sbjct: 221 ACGRTGNMRYNRA-----------------IYEFLIENDVRMDTHLLTA---LVTMYAGA 260
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + A + M N+ S M S G+ A+ +FD + D+V +
Sbjct: 261 GCMDMAREFFRKMSVRNLFVSTAMVS----GYSKCGRLDDAQVIFDQTEKK----DLVCW 312
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVIT-YTVL--------------------- 329
TTMI++Y + +EAL +F++M GIKPDV++ ++V+
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 330 ------------LYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
L + LD ++ M + +VV +S +IN L D
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRR----NVVSWSSMINALSMHGEASD 428
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSK-GMTP 427
A+ LF M + +EP++VT+ ++ GL++E ++ M+ + +TP
Sbjct: 429 ALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITP 479
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
+D G+ +AR++FD R DVVT+ TMI YCR + EA LF++MK +
Sbjct: 153 MDMYASCGRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV 208
Query: 320 KPD--VITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYED 377
PD ++ V G N + I+ + + ++ +D + L+ +
Sbjct: 209 MPDEMILCNIVSACGRTGN---MRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDM 265
Query: 378 AIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISA 434
A F M + L T M+S Y K G + +A + D+ K + + +ISA
Sbjct: 266 AREFFRKMSVRNL----FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 157/387 (40%), Gaps = 56/387 (14%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +LI+GY G +A +F M N G PD T+ + ++ I +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G + ++ G++ A F+ + +++V +++M+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI-------------- 207
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG------DI 234
GY + D + A +LF + + EE +T +C++ D+
Sbjct: 208 ----------CGYARRDFAKDAVDLFFRM-----VRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
K+ +R+ +E + +M S ++D A+ LFD + D+ M
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL--DLC--NAM 308
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD----- 349
++Y R +EAL +F M G++PD I+ + + + + L N +W
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRIS----MLSAISSCSQLR--NILWGKSCHGY 362
Query: 350 -MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
++ S D +C + LI+ MK + A R+F+ M +K + VT+ +++ Y + G
Sbjct: 363 VLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTV----VTWNSIVAGYVENG 417
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAV 435
+ A E + M K + + IIS +
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGL 444
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 175/419 (41%), Gaps = 41/419 (9%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ SG+ ++ + + + D K +D A + +E N+DL + Y QG
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL----CNAMASNYVRQGLT 318
Query: 75 IDAFYMFNEMKNKGFKPDIVTY-----------NVLAAGVCRNDEARVAINNFDEMESDG 123
+A +FN M + G +PD ++ N+L C R ++D + +
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE-----ASNNNNN 178
++ H+ A F+R+ +K+V ++++V GY E A+
Sbjct: 379 IDMYMKCHRQ-----------DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 179 YGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC-LVGDIG 235
+K+ + + G + L E+A E+F + ++ + + + C +G +
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A + + ++ + + ++D G + A S+F+S R DV +T I
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR----DVSAWTAAI 543
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ + + A++LF DM +G+KPD + + L + +K +
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
S + V Y +++ L + E+A++L EDM +EP+ V + +++ +G ++ A+
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAA 659
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 187/429 (43%), Gaps = 48/429 (11%)
Query: 6 DVVDKF-KEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTL 64
D VD F + ++ + + V V A KL ++ ++ +R I+++ + L
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 65 IKGYCLQGNLID-AFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDG 123
+ Y ++ N ID A +F+E ++ N +A+ R R A+ F+ M G
Sbjct: 278 VDMY-MKCNAIDVAKRLFDEYG----ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDK 183
V P+ + ++ + S ++ N L KS Y + NG+ E+ +N N D
Sbjct: 333 VRPDRIS---MLSAISSCSQLR------NILWGKSCHGY-VLRNGF-ESWDNICNALIDM 381
Query: 184 SPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLET 243
Y K + A+ +F +SNK + ++ G++ A + ET
Sbjct: 382 ---------YMKCHRQDTAFRIFDRMSNKTVVTWN----SIVAGYVENGEVDAAWETFET 428
Query: 244 MRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGR-GFTPDVVTYTTMINSYCRMN 302
M N+ + ++ ++ L + A +F S + G D VT ++ ++ +
Sbjct: 429 MPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 303 SLKEALDLFQDMKRRGIKPDVITYTVL--LYGSFKNA-AALDVINTIWRDMKQTEISLDV 359
+L A ++ +++ GI+ DV T L ++ + +A+ + N++ + DV
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL--------TNRDV 536
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
++ I + N E AI LF+DMI++GL+PD V + ++ GL+++ E+
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYS 596
Query: 420 M-SSKGMTP 427
M G++P
Sbjct: 597 MLKLHGVSP 605
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 36/268 (13%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMK-NKGFKPDIVTYNVLAAGVCRNDEARVAINNFDE-- 118
T ++ C G + A + EM KG K +IVT+ + G C V +F+E
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCC------VKRWDFEELD 266
Query: 119 -----MESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEAS 173
ME + V + ++K++I+G S GKV EAE + DK + + S + N
Sbjct: 267 LVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYN------ 320
Query: 174 NNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD 233
+ GY + LVEK EL+ E+S++G +++ + L+ LC G
Sbjct: 321 --------------LIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGK 366
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
+ +AM L +R E + MYS + + VG + + + GF P
Sbjct: 367 VCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGATICER 426
Query: 294 MINSYCRMNSLKEALDLFQDMKRRGIKP 321
+ +S +N KEA L + + GIKP
Sbjct: 427 LADSLFEVNR-KEAQMLITIVVKCGIKP 453
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 107/218 (49%), Gaps = 7/218 (3%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT- 290
G + +++ E M++ V+ + ++ L L + + AR F V G DVVT
Sbjct: 153 GKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGI--DVVTV 210
Query: 291 --YTTMINSYCRMNSLKEALDLFQDMKR-RGIKPDVITYTVLLYGSFKNAAALDVINTIW 347
T ++ C + A +L ++M +G+K +++T+ ++ G + ++ +
Sbjct: 211 YSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVL 269
Query: 348 RDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKK 407
+ M++ + LD+ Y VLI+G E+A RL M DK L + Y +++ Y +
Sbjct: 270 KLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRF 329
Query: 408 GLMKEASELLDEMSSKGMTPSSHIISAVNRSILKARKV 445
GL+++ EL EMSS+G+TP+ + + KA KV
Sbjct: 330 GLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKV 367
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 25/222 (11%)
Query: 8 VDKFKEFKESGMFLDGVAYNIV-FDAL--CKLGKVD-DAIEMREELRVK-NIDLDIKHYT 62
+ + +E E + GV NIV F ++ C + + D + +++ +L K ++ LD+ Y
Sbjct: 226 ITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYK 285
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
LI G+ G + +A + M +K + + YN++ G R I + EM S
Sbjct: 286 VLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSR 345
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
GV PN T+ +++ GLC GKV EA + N L+ EI D+
Sbjct: 346 GVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI-------------------DE 386
Query: 183 KSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKL 224
+ + +SE Y +V +++K+ E+ E+ G I C +L
Sbjct: 387 EMYSTLSEECY-RVGMIDKSLEVVAEMIRDGFIPGATICERL 427
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 257 SIVLDALCHVGKTKHARSLFDSF-VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMK 315
++V+ LC G+ AR L + + +G ++VT+ +MI + +E + + M+
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLME 273
Query: 316 RRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNY 375
+ + D+ +Y VL+ G F + ++ + M ++ ++ Y++++NG +
Sbjct: 274 KESVMLDLDSYKVLIDG-FTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLV 332
Query: 376 EDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
E I L+ +M +G+ P+K TY +++ K G + EA L+E+
Sbjct: 333 EKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 170/416 (40%), Gaps = 45/416 (10%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D V N + + K G +++A ++ E++ + D +TTLI GY DA F
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFF 149
Query: 82 NEMKNKGFKPDIVTYN--VLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLC 139
N+M G+ P+ T + + AA R ++ F G + N +++
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF--CVKCGFDSNVHVGSALLDLYT 207
Query: 140 SVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLV 199
G + +A+ F+ L+ ++ ++A++ G+ S
Sbjct: 208 RYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG------------------------T 243
Query: 200 EKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIV 259
EKA ELF + G S L G + + + M + + +
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 260 LDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGI 319
LD G AR +FD R DVV++ +++ +Y + KEA+ F++M+R GI
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGI 359
Query: 320 KPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAI 379
+P+ I++ +L ++ LD + MK+ I + Y +++ L + + A+
Sbjct: 360 RPNEISFLSVLTAC-SHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 380 RLFEDMIDKGLEPDKVTYTDMIS---LYYKKGLMKEASELLDEMSSKGMTPSSHII 432
R E+M +EP + +++ ++ L A+E + E+ P H+I
Sbjct: 419 RFIEEM---PIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPD--DPGPHVI 469
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 157/387 (40%), Gaps = 56/387 (14%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
Y +LI+GY G +A +F M N G PD T+ + ++ I +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYG 180
G + ++ G++ A F+ + +++V +++M+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMI-------------- 207
Query: 181 DDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVG------DI 234
GY + D + A +LF + + EE +T +C++ D+
Sbjct: 208 ----------CGYARRDFAKDAVDLFFRM-----VRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 235 GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTM 294
K+ +R+ +E + +M S ++D A+ LFD + ++ M
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA----SNLDLCNAM 308
Query: 295 INSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRD----- 349
++Y R +EAL +F M G++PD I+ + + + + L N +W
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRIS----MLSAISSCSQLR--NILWGKSCHGY 362
Query: 350 -MKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKG 408
++ S D +C + LI+ MK + A R+F+ M +K + VT+ +++ Y + G
Sbjct: 363 VLRNGFESWDNIC-NALIDMYMKCHRQDTAFRIFDRMSNKTV----VTWNSIVAGYVENG 417
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAV 435
+ A E + M K + + IIS +
Sbjct: 418 EVDAAWETFETMPEKNIVSWNTIISGL 444
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 175/419 (41%), Gaps = 41/419 (9%)
Query: 15 KESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNL 74
+ SG+ ++ + + + D K +D A + +E N+DL + Y QG
Sbjct: 263 RNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL----CNAMASNYVRQGLT 318
Query: 75 IDAFYMFNEMKNKGFKPDIVTY-----------NVLAAGVCRNDEARVAINNFDEMESDG 123
+A +FN M + G +PD ++ N+L C R ++D + +
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 124 VEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCE-----ASNNNNN 178
++ H+ A F+R+ +K+V ++++V GY E A+
Sbjct: 379 IDMYMKCHRQ-----------DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 179 YGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLC-LVGDIG 235
+K+ + + G + L E+A E+F + ++ + + + C +G +
Sbjct: 428 TMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALD 487
Query: 236 KAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMI 295
A + + ++ + + ++D G + A S+F+S R DV +T I
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR----DVSAWTAAI 543
Query: 296 NSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEI 355
+ + + A++LF DM +G+KPD + + L + +K +
Sbjct: 544 GAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGV 603
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEAS 414
S + V Y +++ L + E+A++L EDM +EP+ V + +++ +G ++ A+
Sbjct: 604 SPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAACRVQGNVEMAA 659
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/459 (19%), Positives = 185/459 (40%), Gaps = 54/459 (11%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
K+ +E G+ + V YN + + G+ A+ + + + K + + Y+T + Y
Sbjct: 207 LKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRR 266
Query: 71 QGNLIDAFYMFNEMKNKGFKPDI---------------------VTYNVLAAGVCRNDEA 109
+ + A F E++ K K +I + Y V+ + ++D
Sbjct: 267 MEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNW 326
Query: 110 RVAI-NNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNG 168
+ + M+S GV P+ H+ +I + + R++++ EI ++ N
Sbjct: 327 TTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNH 386
Query: 169 YCEASNNNNNYGD---------DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEE 219
+ D+ P P + + Y +LV + + L ++K I +
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEP-NNLSY---ELVVSHFNILLSAASKRGIWR-- 440
Query: 220 SCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSF 279
++LL M ++P + ++ VL A +T A +F +
Sbjct: 441 ----------------WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAM 484
Query: 280 VGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAA 339
V G P V++Y ++++ + EA ++ M + GI+P++ YT +
Sbjct: 485 VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMA-SVLTGQQK 543
Query: 340 LDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTD 399
++++T+ ++M I VV ++ +I+G + A F M + +EP+++TY
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 400 MISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAVNRS 438
+I + A EL + ++G+ SS AV +S
Sbjct: 604 LIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVKS 642
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 67/267 (25%)
Query: 234 IGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTT 293
G+A K+L+ M + P+ + Y+ ++ G+ A + D +GF P+ +TY+T
Sbjct: 200 FGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST 259
Query: 294 MINSYCRMNSLKEALDLFQDMK----RRGIKPDV-----------------ITYTVLLYG 332
+ Y RM AL+ F +++ +R I DV I Y V+
Sbjct: 260 ALLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRW 319
Query: 333 SFKN----AAALDVINT----------------IWRDMKQ-----------------TEI 355
K+ L ++N IW ++ +EI
Sbjct: 320 LVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEI 379
Query: 356 SLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY-------YKKG 408
SL V + + + G K + A+ ++ED++D+G EP+ ++Y ++S + K+G
Sbjct: 380 SLSVCNHLIWLMG--KAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRG 437
Query: 409 LMKEASELLDEMSSKGMTPSSHIISAV 435
+ + LL++M KG+ P +AV
Sbjct: 438 IWRWGVRLLNKMEDKGLKPQRRHWNAV 464
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 179/435 (41%), Gaps = 39/435 (8%)
Query: 4 DSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVK-NIDLDIKHYT 62
+S+ D FK G+ DG A + + ++ L VK +D D+ +
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGS 568
Query: 63 TLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD 122
+LI Y G + DA +F+ + + +V+ N L AG +N+ A+ F EM +
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLP----EWSVVSMNALIAGYSQNNLEE-AVVLFQEMLTR 623
Query: 123 GVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDD 182
GV P+ T I+E C + F+ + +
Sbjct: 624 GVNPSEITFATIVEA-CHKPESLTLGTQFH-------------------GQITKRGFSSE 663
Query: 183 KSPTPISEVG-YCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
IS +G Y + +A LF ELS+ I +++ G +A+K
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTG---MMSGHSQNGFYEEALKFY 720
Query: 242 ETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRM 301
+ MR V P Q + VL + + R++ D +T T+I+ Y +
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 302 NSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVC 361
+K + +F +M+RR +V+++ L+ G KN A D + I+ M+Q+ I D +
Sbjct: 781 GDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALK-IFDSMRQSHIMPDEIT 836
Query: 362 YSVLINGLMKTDNYEDAIRLFEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEM 420
+ ++ D ++FE MI + G+E M+ L + G ++EA + ++
Sbjct: 837 FLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIE-- 894
Query: 421 SSKGMTPSSHIISAV 435
++ + P + + S++
Sbjct: 895 -AQNLKPDARLWSSL 908
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 228 LCLVGDIGKAMKLLETMRSL---NVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
L + IGK K+L + SL + P++ +SIVL + R + S + G
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+ +++ Y + + + +A +F+ + + P+
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNT--------------------- 226
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
VC++ L +G +K E+A+ +FE M D+G PD + + +I+ Y
Sbjct: 227 ---------------VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTY 271
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISA 434
+ G +K+A L EMSS + + +IS
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/419 (20%), Positives = 167/419 (39%), Gaps = 71/419 (16%)
Query: 27 NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKN 86
N + D K G ++DA ++ E + D D + T+I Y N +AF +F M
Sbjct: 467 NALVDMYAKCGALEDARQIFERM----CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 87 KGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD---------GVEPNSTTHKMIIEG 137
G D G C + + + G++ + T +I+
Sbjct: 523 CGIVSD---------GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 138 LCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVD 197
G + +A F+ L + SV +A++ GY S NN
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGY---SQNN--------------------- 609
Query: 198 LVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGD---IGKAMKLLETMRSLNVEPSQI 254
+E+A LF E+ +G + E F + + C + +G T R + E +
Sbjct: 610 -LEEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
S++ + G T+ A +LF +V +T M++ + + +EAL +++M
Sbjct: 668 GISLLGMYMNSRGMTE-ACALFSELSS---PKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 315 KRRGIKPDVITYTVLL-----YGSFKNAAAL-DVINTIWRDMKQTEISLDVVCYSVLING 368
+ G+ PD T+ +L S + A+ +I + D LD + + LI+
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD-------LDELTSNTLIDM 776
Query: 369 LMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
K + + + ++F++M + + V++ +I+ Y K G ++A ++ D M + P
Sbjct: 777 YAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMP 832
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/436 (18%), Positives = 170/436 (38%), Gaps = 57/436 (13%)
Query: 1 MGMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKH 60
+G V+ F E+ +F + ++IV + + +E ++ I + ++
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR----ETNVEFGRQIHCSMIKMGLER 193
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKN--KGFK----PDIVTYNVLAAGVCRNDEARVAIN 114
YC G L+D + + + + + F+ P+ V + L +G + A+
Sbjct: 194 -----NSYC-GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 115 NFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGY----C 170
F+ M +G P+ +I +GK+ +A F + V ++ M++G+ C
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 171 EASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCL 230
E A E F + + + +L+ + +
Sbjct: 308 ETV----------------------------AIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 231 VGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVT 290
V ++ + + L + + + S ++ K + A +F++ + + V
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK----NDVF 395
Query: 291 YTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDM 350
+ MI Y + ++LF DMK G D T+T LL + + L++ + +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL-STCAASHDLEMGSQFHSII 454
Query: 351 KQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLM 410
+ +++ ++ + L++ K EDA ++FE M D+ D VT+ +I Y +
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDR----DNVTWNTIIGSYVQDENE 510
Query: 411 KEASELLDEMSSKGMT 426
EA +L M+ G+
Sbjct: 511 SEAFDLFKRMNLCGIV 526
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 35/306 (11%)
Query: 25 AYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
A++++ K++DA + E++ KN + ++ ++ GY G++ +A +F +
Sbjct: 179 AWSVMLGVYVNNRKMEDARKFFEDIPEKNAFV----WSLMMSGYFRIGDVHEARAIFYRV 234
Query: 85 KNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKV 144
F D+V +N L AG +N + AI+ F M+ +G EP++ T I+ G++
Sbjct: 235 ----FARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRL 290
Query: 145 GEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYE 204
+ + + +E+ + N + Y K +E A
Sbjct: 291 DVGREVHSLINHRGIELNQFVSNALIDM--------------------YAKCGDLENATS 330
Query: 205 LFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALC 264
+F +S + C +++ L + G +A+++ TM SL+++P +I + VL A
Sbjct: 331 VFESIS----VRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 265 HVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVI 324
H G +F + P+V + +I+ R LKEA L ++M +KP+
Sbjct: 387 HGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKPNDT 443
Query: 325 TYTVLL 330
LL
Sbjct: 444 VLGALL 449
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 169/391 (43%), Gaps = 37/391 (9%)
Query: 52 KNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKG-FKPDIVTYNVLAAGVCRNDEAR 110
+++ L H + LIK + +G+ I A ++ ++ +G + P V +L A C R
Sbjct: 5 EHLSLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL-ILRACACV--VPR 61
Query: 111 VAINNFDEMESDGVEPNSTTHKMIIEGLCSV-GKVG---EAEAHFNRLQDKSVEIYSAMV 166
V + + S+ ++ + M+ L S+ GK G A F+ + +++V ++AM+
Sbjct: 62 VVLGKL--LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMI 119
Query: 167 NGYCEASNNNNNYGDD---------KSPTPISEV-GYCKVDLVEKAYELFLELSNKGDIA 216
GY SN + + T I + GY K +EKA ELF + +
Sbjct: 120 GGY--MSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNV 177
Query: 217 KEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLF 276
K S +L + A K E + E + ++S+++ +G AR++F
Sbjct: 178 KAWSV--MLGVYVNNRKMEDARKFFEDIP----EKNAFVWSLMMSGYFRIGDVHEARAIF 231
Query: 277 DSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKN 336
R F D+V + T+I Y + +A+D F +M+ G +PD +T + +L +
Sbjct: 232 Y----RVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSIL-SACAQ 286
Query: 337 AAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVT 396
+ LDV + + I L+ + LI+ K + E+A +FE + + +
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV----AC 342
Query: 397 YTDMISLYYKKGLMKEASELLDEMSSKGMTP 427
MIS G KEA E+ M S + P
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 160/397 (40%), Gaps = 44/397 (11%)
Query: 61 YTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEME 120
+ +IKGY + + A +F M + ++ ++V+ N + A F+++
Sbjct: 147 WIEMIKGYGKRIEIEKARELFERMPFE--LKNVKAWSVMLGVYVNNRKMEDARKFFEDIP 204
Query: 121 SDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNN---- 176
E N+ +++ G +G V EA A F R+ + + I++ ++ GY + ++
Sbjct: 205 ----EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAID 260
Query: 177 ---NNYGDDKSPTPI---SEVGYC----KVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
N G+ P + S + C ++D+ + + L ++++G + L+
Sbjct: 261 AFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL---INHRGIELNQFVSNALID 317
Query: 227 KLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTP 286
GD+ A + E++ +V M S L GK K A +F + P
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMIS----CLAIHGKGKEALEMFSTMESLDLKP 373
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLY-----GSFKNAAALD 341
D +T+ ++ + L E L +F +MK + +KP+V + L++ G K A
Sbjct: 374 DEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEA---- 429
Query: 342 VINTIWRDMKQTEISLDVVCYSVLINGL---MKTDNYEDAIRLFEDMIDKGLEPDKVTYT 398
+R +K+ + + L+ M T+ E +++ E +
Sbjct: 430 -----YRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLA 484
Query: 399 DMISLYYKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
+ +LY + A L EM +G+ S + S V
Sbjct: 485 SISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLV 521
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 168/428 (39%), Gaps = 91/428 (21%)
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
+++ Y GN +A+ F E+ ++ D+ ++ + A + R+ + + + F EM++
Sbjct: 269 SSMFSFYSKSGNPSEAYLSFRELGDE----DMFSWTSIIASLARSGDMEESFDMFWEMQN 324
Query: 122 DGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGD 181
G+ P+ +I L + V + +A + + S + N
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSM--------- 375
Query: 182 DKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKL-CLVGDIGKAMKL 240
YCK +L+ A +LF +S +G+ + K K+ C V K ++L
Sbjct: 376 -----------YCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV----KCIEL 420
Query: 241 LETMRSLNVEPSQIMYSIVLDALCHVG-----KTKHA--------------RSLFD---- 277
+++L +E + V+ + H+G K+ H SL D
Sbjct: 421 FRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK 480
Query: 278 ----SFVGRGFT---PDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
+ R F +V+T+ MI SY ++A+ LF M KP IT LL
Sbjct: 481 MGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 331 YGSFKNAAALDVINTIWRDMKQTE----ISL---------------------------DV 359
N +L+ I R + +TE +SL D
Sbjct: 541 MACV-NTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDA 599
Query: 360 VCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDE 419
VC++V+I+G + E AI LF+ M + ++P T+ ++S GL+++ +L +
Sbjct: 600 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK 659
Query: 420 MSSKGMTP 427
M + P
Sbjct: 660 MHQYDVKP 667
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 161/384 (41%), Gaps = 53/384 (13%)
Query: 55 DLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARV--- 111
D D+ +T++I G++ ++F MF EM+NKG PD V + L N+ ++
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLI-----NELGKMMLV 347
Query: 112 ----AINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRL-QDKSVEIYSAMV 166
A + F + +ST ++ C + AE F R+ ++ + E ++ M+
Sbjct: 348 PQGKAFHGF--VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 167 NGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLT 226
G YG K C V K ELF ++ N G S +++
Sbjct: 406 KG----------YGKMK----------CHV----KCIELFRKIQNLGIEIDSASATSVIS 441
Query: 227 KLCLVGDI--GKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGF 284
+G + GK++ SL++ S + + ++D +G A +F
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVV--NSLIDLYGKMGDLTVAWRMFCE-----A 494
Query: 285 TPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVIN 344
+V+T+ MI SY ++A+ LF M KP IT LL N +L+
Sbjct: 495 DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACV-NTGSLERGQ 553
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
I R + +TE +++ + LI+ K + E + LF D G + D V + MIS Y
Sbjct: 554 MIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF----DAGNQKDAVCWNVMISGY 609
Query: 405 YKKGLMKEASELLDEMSSKGMTPS 428
G ++ A L D+M + P+
Sbjct: 610 GMHGDVESAIALFDQMEESDVKPT 633
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 137/324 (42%), Gaps = 34/324 (10%)
Query: 8 VDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++ F++ + G+ +D + V + +G V + + ++DL I +LI
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
Y G+L A+ MF E +++T+N + A +++ AI FD M S+ +P+
Sbjct: 478 YGKMGDLTVAWRMFCEADT-----NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPS 532
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
S T ++ + G + + M++ Y + + N +
Sbjct: 533 SITLVTLLMACVNTGSLERGQ----------------MIHRYITETEHEMNLSLSAALID 576
Query: 188 ISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFK-LLTKLCLVGDIGKAMKLLETMRS 246
+ Y K +EK+ ELF + G+ K+ C+ +++ + GD+ A+ L + M
Sbjct: 577 M----YAKCGHLEKSRELF----DAGN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 247 LNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKE 306
+V+P+ + +L A H G + + LF P++ Y+ +++ R +L+E
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEE 687
Query: 307 ALDLFQDMKRRGIKPDVITYTVLL 330
A M PD + + LL
Sbjct: 688 AESTVMSMP---FSPDGVIWGTLL 708
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 163/411 (39%), Gaps = 35/411 (8%)
Query: 9 DKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGY 68
D F E + GM DGV + + + L K+ V + LD +L+ Y
Sbjct: 317 DMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMY 376
Query: 69 CLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS 128
C L A +F + +G K +N + G + I F ++++ G+E +S
Sbjct: 377 CKFELLSVAEKLFCRISEEGNKE---AWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDS 433
Query: 129 TTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNG-----------------YCE 171
+ +I +G V ++ + S+++ ++VN +CE
Sbjct: 434 ASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE 493
Query: 172 ASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLV 231
A N + I+ +C+ EKA LF + ++ + LL
Sbjct: 494 ADTNVITWN-----AMIASYVHCEQS--EKAIALFDRMVSENFKPSSITLVTLLMACVNT 546
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
G + + + + E + + + ++D G + +R LFD+ G D V +
Sbjct: 547 GSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA----GNQKDAVCW 602
Query: 292 TTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMK 351
MI+ Y ++ A+ LF M+ +KP T+ LL + +A ++ ++ M
Sbjct: 603 NVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALL-SACTHAGLVEQGKKLFLKMH 661
Query: 352 QTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMIS 402
Q ++ ++ YS L++ L ++ N E+A M PD V + ++S
Sbjct: 662 QYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSM---PFSPDGVIWGTLLS 709
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 51/331 (15%)
Query: 12 KEFKESGMFLDGVAY----NIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKG 67
++F L G + N + D K +D A ++ +E+ + D+ +T LI
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER----DVISWTELIAA 224
Query: 68 YCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPN 127
Y GN+ A +F + K D+V + + G +N + + A+ FD ME G+ +
Sbjct: 225 YARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 128 STTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTP 187
T I +G ++ D++V+I A +GY SP+
Sbjct: 281 EVTVAGYISACAQLGA--------SKYADRAVQI--AQKSGY--------------SPSD 316
Query: 188 ISEVGYCKVDL------VEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLL 241
+G +D+ VE+A +F+ ++NK L T G +A+ L
Sbjct: 317 HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATH----GRAQEALHLF 372
Query: 242 ETM-RSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDS-FVGRGFTPDVVTYTTMINSYC 299
M ++P+ + + L A H G R +FDS + G P YT M++
Sbjct: 373 HYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLG 432
Query: 300 RMNSLKEALDLFQDMKRRGIKPDVITYTVLL 330
R L+EAL+L + M ++P + LL
Sbjct: 433 RTGRLQEALELIKTMS---VEPHGGVWGALL 460
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 169/401 (42%), Gaps = 55/401 (13%)
Query: 33 LCKLGKVDDAIEMR--EELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFK 90
L KLG D R E ++ +N L +T +I+GY ++G +A M+ M+ +
Sbjct: 91 LTKLGVPMDPYARRVIEPVQFRNPFL----WTAVIRGYAIEGKFDEAIAMYGCMRKEEIT 146
Query: 91 PDIVTYNVL--AAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAE 148
P T++ L A G ++ G + ++ T ++ G C V VG
Sbjct: 147 PVSFTFSALLKACGTMKDLNL-------------GRQFHAQTFRL--RGFCFV-YVG--- 187
Query: 149 AHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISE-----VGYCKVDLVEKAY 203
N + D V+ CE+ + D+ + Y +V +E A
Sbjct: 188 ---NTMIDMYVK---------CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAA 235
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
ELF L K +A ++T +A++ + M + ++ + + A
Sbjct: 236 ELFESLPTKDMVAWT----AMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 264 CHVGKTKHARSLFDSFVGRGFTPD--VVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKP 321
+G +K+A G++P VV + +I+ Y + +++EA+++F M +
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK---- 347
Query: 322 DVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRL 381
+V TY+ ++ G + A + ++ + QTEI + V + + + + ++
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 382 FEDMIDK-GLEPDKVTYTDMISLYYKKGLMKEASELLDEMS 421
F+ M G++P + YT M+ L + G ++EA EL+ MS
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 232 GDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL-----CHVGKTKHARSLFDSFVGRGFTP 286
G +A+ + MR + P +S +L A ++G+ HA++ F RGF
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQT----FRLRGFC- 182
Query: 287 DVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTI 346
V TMI+ Y + S+ A +F +M R DVI++T L+ ++ ++ +
Sbjct: 183 FVYVGNTMIDMYVKCESIDCARKVFDEMPER----DVISWTELI-AAYARVGNMECAAEL 237
Query: 347 WRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYK 406
+ + + D+V ++ ++ G + ++A+ F+ M G+ D+VT IS +
Sbjct: 238 FESLP----TKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 407 KGLMKEASELLDEMSSKGMTPSSHII 432
G K A + G +PS H++
Sbjct: 294 LGASKYADRAVQIAQKSGYSPSDHVV 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 132/319 (41%), Gaps = 33/319 (10%)
Query: 22 DGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMF 81
D +++ + A ++G ++ A E+ E L K D+ +T ++ G+ +A F
Sbjct: 214 DVISWTELIAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 82 NEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNS--TTHKMIIEGLC 139
+ M+ G + D VT + + ++ A + G P+ +I+
Sbjct: 270 DRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYS 329
Query: 140 SVGKVGEAEAHFNRLQDKSVEIYSAMV-----NGYCEASNNNNNYGDDKS---PTPISEV 191
G V EA F + +K+V YS+M+ +G + + + +Y ++ P ++ V
Sbjct: 330 KCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFV 389
Query: 192 GYCKV----DLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSL 247
G LV++ ++F + + + + L +G G+ + LE ++++
Sbjct: 390 GALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDL--LGRTGRLQEALELIKTM 447
Query: 248 NVEPSQIMYSIVLDALCHVGKTKH-----ARSLFDSFVGRGFTPDVV-TYTTMINSYCRM 301
+VEP ++ +L A C + A LF+ PD++ Y + N Y
Sbjct: 448 SVEPHGGVWGALLGA-CRIHNNPEIAEIAAEHLFE------LEPDIIGNYILLSNVYASA 500
Query: 302 NSLKEALDLFQDMKRRGIK 320
L + + +K +G+K
Sbjct: 501 GDWGGVLRVRKLIKEKGLK 519
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 44 EMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGV 103
EM EE+ ++ Y L++ YC +G + +A ++ EMK +G DIV YN + G+
Sbjct: 270 EMEEEV---GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGL 326
Query: 104 CRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDKSVE--- 160
C N E A F +M G+E T++ ++ G C G V + ++ K E
Sbjct: 327 CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADG 386
Query: 161 -IYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAYELFLELSNKGDIAKEE 219
A+V G C DD+ + E D V +A +F N
Sbjct: 387 LTIEALVEGLC----------DDRDGQRVVEAADIVKDAVREA--MFYPSRN-------- 426
Query: 220 SCFKLLTK-LCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDALCHVG 267
C++LL K LC G + +A+ + M +PSQ Y +D VG
Sbjct: 427 -CYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVG 474
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 2 GMDSDVVDKFKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHY 61
G+ S+ ++E K G+ D VAYN + LC +V A E+ ++ +K I+ Y
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTY 354
Query: 62 TTLIKGYCLQGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMES 121
L+ GYC G++ ++ EMK KGF+ D +T L G+C + + + + D +
Sbjct: 355 EHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAAD-IVK 413
Query: 122 DGVE-----PNSTTHKMIIEGLCSVGKVGEAEAHFNRLQDK----SVEIYSAMVNGY 169
D V P+ ++++++ LC GK+ A + K S E Y A ++GY
Sbjct: 414 DAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 128/307 (41%), Gaps = 37/307 (12%)
Query: 29 VFDALCKL----GKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFNEM 84
VFD L K ++D A+ + +LR + I+ I LI + + + M+ E+
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 85 ------------KNKG-FKPDIVTYNVLAAGVCRNDEARVAINNFDEMESD-GVEPNSTT 130
K G KP+ T+N + R E + + EME + G PN +
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDKSV----EIYSAMVNGYC---------EASNNNN 177
+ +++E C+ G + EAE + ++ + V Y+ M+ G C E +
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMG 343
Query: 178 NYGDDKSPTPISEV--GYCKVDLVEKAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIG 235
G + + + GYCK V+ ++ E+ KG A + L+ LC D
Sbjct: 344 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ 403
Query: 236 KAMK----LLETMRSLNVEPSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTY 291
+ ++ + + +R PS+ Y +++ LC GK A ++ VG+GF P TY
Sbjct: 404 RVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Query: 292 TTMINSY 298
I+ Y
Sbjct: 464 RAFIDGY 470
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 251 PSQIMYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDL 310
P+ Y+++++A C G A +++ RG D+V Y TMI C + +A +L
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 311 FQDMKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM 370
F+DM +GI+ +TY L+ G K A +D ++R+MK+ D + L+ GL
Sbjct: 339 FRDMGLKGIECTCLTYEHLVNGYCK-AGDVDSGLVVYREMKRKGFEADGLTIEALVEGLC 397
Query: 371 KTDNYE---DAIRLFEDMIDKGL-EPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMT 426
+ + +A + +D + + + P + Y ++ + G M A + EM KG
Sbjct: 398 DDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 427 PSSHIISA 434
PS A
Sbjct: 458 PSQETYRA 465
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 154/393 (39%), Gaps = 83/393 (21%)
Query: 45 MREELRVKNIDLD----IKHYTTLIKGY----------------CLQGNLID-AFYMFNE 83
+R LR+ D D +K + +LIK Y CL ID A + +
Sbjct: 128 IRLALRLAATDEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRK 187
Query: 84 MKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIE--GLCSV 141
++++G I T N L V R A S +KM E GL V
Sbjct: 188 LRSRGINAQISTCNALITEVSRRRGA------------------SNGYKMYREVFGLDDV 229
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEK 201
V EA+ +++ + S MV+ Y E + ++VE+
Sbjct: 230 S-VDEAKKMIGKIKPNATTFNSMMVSFYREG----------------------ETEMVER 266
Query: 202 AYELFLELSNKGDIAKEESCFK-------LLTKLCLVGDIGKAMKLLETMRSLNVEPSQI 254
+ ++ +E C L+ C G + +A K+ E M+ V +
Sbjct: 267 IWR---------EMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 317
Query: 255 MYSIVLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDM 314
Y+ ++ LC + A+ LF +G +TY ++N YC+ + L ++++M
Sbjct: 318 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 377
Query: 315 KRRGIKPDVITYTVLLYGSFKNAAALDVINT--IWRD-MKQTEISLDVVCYSVLINGLMK 371
KR+G + D +T L+ G + V+ I +D +++ CY +L+ L +
Sbjct: 378 KRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCE 437
Query: 372 TDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+ A+ + +M+ KG +P + TY I Y
Sbjct: 438 DGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 286 PDVVTYTTMINSYCRMNSLKEALDLFQDMKRR-GIKPDVITYTVLLYGSFKNAAALDVIN 344
P+ T+ +M+ S+ R + ++++M+ G P+V +Y VL+ ++ +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLME-AYCARGLMSEAE 301
Query: 345 TIWRDMKQTEISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLY 404
+W +MK + D+V Y+ +I GL A LF DM KG+E +TY +++ Y
Sbjct: 302 KVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGY 361
Query: 405 YKKGLMKEASELLDEMSSKGMTPSSHIISAV 435
K G + + EM KG I A+
Sbjct: 362 CKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 178/435 (40%), Gaps = 81/435 (18%)
Query: 34 CKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCLQGNLIDAFYMFN---EMKNKGFK 90
CK G V+D +++ + +N ++T++ GY +G + +A +FN K +G
Sbjct: 164 CKAGLVEDGLKVFAYMPERNT----YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSD 219
Query: 91 PDIVTYNVLAA-------GVCRNDEARVAINNFDEMESDGVEPNSTTHKMIIEGLCSVGK 143
D V VL++ G+ R + I N G+ ++
Sbjct: 220 SDYVFTAVLSSLAATIYVGLGRQIHC-ITIKN-------GLLGFVALSNALVTMYSKCES 271
Query: 144 VGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKVDLVEKAY 203
+ EA F+ D++ +SAMV GY S N + +A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGY---SQNGESL---------------------EAV 307
Query: 204 ELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKLLETMRSLNVEPSQIMYSIVLDAL 263
+LF + + G E + +L + + + +L + L E + ++D
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 264 CHVGKTKHARSLFDSFVGRGFTPDVVTYTTMINSYCRMNSLKEALDLFQDMKRRGIKPDV 323
G AR FD R DV +T++I+ Y + + +EAL L++ MK GI P+
Sbjct: 368 AKAGCLADARKGFDCLQER----DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 324 ITYTVLLYG----------------SFKNAAALDV-----INTIWRDMKQTE-------- 354
T +L + K+ L+V ++T++ E
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 355 -ISLDVVCYSVLINGLMKTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEA 413
+ DVV ++ +I+GL ++A+ LFE+M+ +G+EPD VT+ ++IS KG ++
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 414 SELLDEMSSK-GMTP 427
+ MS + G+ P
Sbjct: 544 WFYFNMMSDQIGLDP 558
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 52/306 (16%)
Query: 142 GKVGEAEAHFNRLQDKSVEIYSAMVNGYCEASNNNNNYGDDKSPTPISEVGYCKV-DLVE 200
GK+ +A + FN + K V +++++ GY + N G S T + + D++
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGY------SQNGGISSSYTVMQLFREMRAQDILP 116
Query: 201 KAYELFLELSNKGDIAKEESCFKLLTKLCLVGDIGKAMKL-LETMRSLNVEPSQI-MYSI 258
AY L I K ES + T VG A+ + + + + V+ S + MY
Sbjct: 117 NAYTL-------AGIFKAESSLQSST----VGRQAHALVVKMSSFGDIYVDTSLVGMY-- 163
Query: 259 VLDALCHVGKTKHARSLFDSFVGRGFTPDVVTYT--TMINSYCRMNSLKEAL---DLFQD 313
C G + +F + P+ TYT TM++ Y ++EA+ +LF
Sbjct: 164 -----CKAGLVEDGLKVF------AYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 314 MKRRGIKPDVITYTVLLYGSFKNAAALDVINTIWRDMKQTEISLDVVCYSVLINGLM--- 370
K G D + VL ++ A + + R + I ++ + L N L+
Sbjct: 213 EKEEGSDSDYVFTAVL------SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 371 -KTDNYEDAIRLFEDMIDKGLEPDKVTYTDMISLYYKKGLMKEASELLDEMSSKGMTPSS 429
K ++ +A ++F+ D+ + +T++ M++ Y + G EA +L M S G+ PS
Sbjct: 267 SKCESLNEACKMFDSSGDR----NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSE 322
Query: 430 HIISAV 435
+ I V
Sbjct: 323 YTIVGV 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 11 FKEFKESGMFLDGVAYNIVFDALCKLGKVDDAIEMREELRVKNIDLDIKHYTTLIKGYCL 70
++ K +G+ + V A L ++ ++ L++ + L Y
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 71 QGNLIDAFYMFNEMKNKGFKPDIVTYNVLAAGVCRNDEARVAINNFDEMESDGVEPNSTT 130
G+L D +F NK D+V++N + +G+ N + A+ F+EM ++G+EP+ T
Sbjct: 471 CGSLEDGNLVFRRTPNK----DVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVT 526
Query: 131 HKMIIEGLCSVGKVGEAEAHFNRLQDK-----SVEIYSAMVN 167
II G V +FN + D+ V+ Y+ MV+
Sbjct: 527 FVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVD 568